Pregenerated sensors for PGAM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000171314Ensembl transcript IDs: ENST00000467867.1, ENST00000473929.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTGAACAGCAAAGACCTGCACAACCACGCGGATTTCTTGGTGTTCTaGGGCTTGTTAGGCACCCCCAGGGCCTCCACCTACTGCTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: LNSKDLHNHADFLVF*GLLGTPRASTYCWG Trigger: TCCCCAGCAGTAGGTGGAGGCCCTGGGGGTGCCTAACAAGCCTCAGAACACCAAGAAATCCGCGTGGTTGTGCAGGTCTTTGCTGTTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000473929.1 |
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| CDS GCA 90 bp | CACCTCTTCAGTCCAGGGATTCTTGGCCGTGCCGGCAGCAGGGAATaGTTCCTTATTAGCATTCCAACACCACAAAGAGCAGACTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: HLFSPGILGRAGSRE*FLISIPTPQRADWG Trigger: GCCCCAGTCTGCTCTTTGTGGTGTTGGAATGCTAATAAGGAAGCATTCCCTGCTGCCGGCACGGCCAAGAATCCCTGGACTGAAGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS GCA 90 bp | GCAAGCCTGGATAGGCAAGCATTATCTCACAGCCACTTCCACCTTTaGCCAGCGTCCTTAGCCAAAAGCCTACCAGTTCCTCACACCTAC | + |
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Preference number: 5 (lower is better) Translates to: ASLDRQALSHSHFHL*PASLAKSLPVPHTY Trigger: GTAGGTGTGAGGAACTGGTAGGCTTTTGGCTAAGGACGCTGGGCAAAGGTGGAAGTGGCTGTGAGATAATGCTTGCCTATCCAGGCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS GCA 90 bp | TGGCTGCTTCTTTGTCCAGAGGTTAGAAGGGAGCAAAGGAGGATCTaGCCCTATCATCAGCGGAAGCACCTCTTCAGTCCAGGGATTCTT | + |
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Preference number: 5 (lower is better) Translates to: WLLLCPEVRREQRRI*PYHQRKHLFSPGIL Trigger: AAGAATCCCTGGACTGAAGAGGTGCTTCCGCTGATGATAGGGGCAGATCCTCCTTTGCTCCCTTCTAACCTCTGGACAAAGAAGCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS GCA 90 bp | CTGAGGCCAAATACCTGTGCCTCATCAATGACCCTTGTGAATGGCTaGTTCTTTGTCCAGAGGTTAGAAGGGAGCAAAGGAGGATCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LRPNTCASSMTLVNG*FFVQRLEGSKGGSA Trigger: GGCAGATCCTCCTTTGCTCCCTTCTAACCTCTGGACAAAGAAGCAGCCATTCACAAGGGTCATTGATGAGGCACAGGTATTTGGCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS GCA 90 bp | AGTGAAGGCAAGAAGCTAGGAGAGCAATCTGAGGCCAAATACCTGTaGCTCATCAATGACCCTTGTGAATGGCTGCTTCTTTGTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SEGKKLGEQSEAKYL*LINDPCEWLLLCPE Trigger: CTCTGGACAAAGAAGCAGCCATTCACAAGGGTCATTGATGAGGCACAGGTATTTGGCCTCAGATTGCTCTCCTAGCTTCTTGCCTTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS CCA 90 bp | CAATCTGAGGCCAAATACCTGTGCCTCATCAATGACCCTTGTGAATaGCTGCTTCTTTGTCCAGAGGTTAGAAGGGAGCAAAGGAGGATC | + |
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Preference number: 5 (lower is better) Translates to: QSEAKYLCLINDPCE*LLLCPEVRREQRRI Trigger: GATCCTCCTTTGCTCCCTTCTAACCTCTGGACAAAGAAGCAGCCATTCACAAGGGTCATTGATGAGGCACAGGTATTTGGCCTCAGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS TCA 90 bp | TACATCTACAGATGCGTTTTGGACACACTATTTGTGGAATGCTACTaGACAGCAAAGACCTGCACAACCACGCGGATTTCTTGGTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: YIYRCVLDTLFVECY*TAKTCTTTRISWCS Trigger: AGAACACCAAGAAATCCGCGTGGTTGTGCAGGTCTTTGCTGTTCAGTAGCATTCCACAAATAGTGTGTCCAAAACGCATCTGTAGATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473929.1 |
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| CDS CCA 90 bp | TTCACTCAAGTTACATCTACAGATGCGTTTTGGACACACTATTTGTaGAATGCTACTGAACAGCAAAGACCTGCACAACCACGCGGATTT | + |
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Preference number: 5 (lower is better) Translates to: FTQVTSTDAFWTHYL*NATEQQRPAQPRGF Trigger: AAATCCGCGTGGTTGTGCAGGTCTTTGCTGTTCAGTAGCATTCCACAAATAGTGTGTCCAAAACGCATCTGTAGATGTAACTTGAGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473929.1 |
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| CDS CAA 72 bp | GTGGCGTGTCGATCCGCTAGGATCCGTAGCCGCCTCTaGAGAGGCCTTGGTTACAGCTGCTTTAAGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: VACRSARIRSRL*RGLGYSCFKAQ Trigger: CTGTGCCTTAAAGCAGCTGTAACCAAGGCCTCTCAAGAGGCGGCTACGGATCCTAGCGGATCGACACGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473929.1 |
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| CDS CCA 72 bp | AACACCACAAAGAGCAGACTGGGGCGGGAGCAAGCCTaGATAGGCAAGCATTATCTCACAGCCACTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: NTTKSRLGREQA*IGKHYLTATST Trigger: GGTGGAAGTGGCTGTGAGATAATGCTTGCCTATCCAGGCTTGCTCCCGCCCCAGTCTGCTCTTTGTGGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS CAA 90 bp | TCTGCCCCTATCATCAGCGGAAGCACCTCTTCAGTCCAGGGATTCTaGGCCGTGCCGGCAGCAGGGAATGCTTCCTTATTAGCATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SAPIISGSTSSVQGF*AVPAAGNASLLAFQ Trigger: TTGGAATGCTAATAAGGAAGCATTCCCTGCTGCCGGCACGGCCAAGAATCCCTGGACTGAAGAGGTGCTTCCGCTGATGATAGGGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS CAA 72 bp | ATCATCAGCGGAAGCACCTCTTCAGTCCAGGGATTCTaGGCCGTGCCGGCAGCAGGGAATGCTTCCTTATTA | + |
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Preference number: 6 (lower is better) Translates to: IISGSTSSVQGF*AVPAAGNASLL Trigger: TAATAAGGAAGCATTCCCTGCTGCCGGCACGGCCAAGAATCCCTGGACTGAAGAGGTGCTTCCGCTGATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS GCA 72 bp | AGTCCAGGGATTCTTGGCCGTGCCGGCAGCAGGGAATaGTTCCTTATTAGCATTCCAACACCACAAAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SPGILGRAGSRE*FLISIPTPQRA Trigger: TGCTCTTTGTGGTGTTGGAATGCTAATAAGGAAGCATTCCCTGCTGCCGGCACGGCCAAGAATCCCTGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS GCA 72 bp | GATAGGCAAGCATTATCTCACAGCCACTTCCACCTTTaGCCAGCGTCCTTAGCCAAAAGCCTACCAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: DRQALSHSHFHL*PASLAKSLPVP Trigger: AGGAACTGGTAGGCTTTTGGCTAAGGACGCTGGGCAAAGGTGGAAGTGGCTGTGAGATAATGCTTGCCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS CCA 72 bp | GCCAAATACCTGTGCCTCATCAATGACCCTTGTGAATaGCTGCTTCTTTGTCCAGAGGTTAGAAGGGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: AKYLCLINDPCE*LLLCPEVRREQ Trigger: TTGCTCCCTTCTAACCTCTGGACAAAGAAGCAGCCATTCACAAGGGTCATTGATGAGGCACAGGTATTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS GCA 72 bp | AATACCTGTGCCTCATCAATGACCCTTGTGAATGGCTaGTTCTTTGTCCAGAGGTTAGAAGGGAGCAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: NTCASSMTLVNG*FFVQRLEGSKG Trigger: TCCTTTGCTCCCTTCTAACCTCTGGACAAAGAAGCAGCCATTCACAAGGGTCATTGATGAGGCACAGGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS GCA 72 bp | AAGAAGCTAGGAGAGCAATCTGAGGCCAAATACCTGTaGCTCATCAATGACCCTTGTGAATGGCTGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KKLGEQSEAKYL*LINDPCEWLLL Trigger: AAGAAGCAGCCATTCACAAGGGTCATTGATGAGGCACAGGTATTTGGCCTCAGATTGCTCTCCTAGCTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467867.1 |
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| CDS TCA 72 bp | AGATGCGTTTTGGACACACTATTTGTGGAATGCTACTaGACAGCAAAGACCTGCACAACCACGCGGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: RCVLDTLFVECY*TAKTCTTTRIS Trigger: AGAAATCCGCGTGGTTGTGCAGGTCTTTGCTGTTCAGTAGCATTCCACAAATAGTGTGTCCAAAACGCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473929.1 |
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| CDS CAA 90 bp | TCATTCACTCAAGTTACATCTACAGATGCGTTTTGGACACACTATTaGTGGAATGCTACTGAACAGCAAAGACCTGCACAACCACGCGGA | + |
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Preference number: 6 (lower is better) Translates to: SFTQVTSTDAFWTHY*WNATEQQRPAQPRG Trigger: TCCGCGTGGTTGTGCAGGTCTTTGCTGTTCAGTAGCATTCCACAAATAGTGTGTCCAAAACGCATCTGTAGATGTAACTTGAGTGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473929.1 |
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