Pregenerated sensors for PGA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000229859

Ensembl transcript IDs: ENST00000537954.5, ENST00000538258.1, ENST00000543125.5

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCCACTTACCATGAGGACACTGAGCCTGAGGGAGGTGAGGCCACCTaGCCAAGGTCATACAGCGGGGGAGTGGTGGAACTACGTTTGGAA	+
Preference number: 5 (lower is better) Translates to: STYHEDTEPEGGEAT*PRSYSGGVVELRLE Trigger: TTCCAAACGTAGTTCCACCACTCCCCCGCTGTATGACCTTGGGCAGGTGGCCTCACCTCCCTCAGGCTCAGTGTCCTCATGGTAAGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543125.5
CDS GCA 90 bp	GCCTCCTCAGGGCTACCCTTGATTGGGCACTTTCTAGGGCTGTCCTaGGGTGTGACTAATGTGGTTTCTTTTCCTCTTAGGCCAGTGCCT	+
Preference number: 5 (lower is better) Translates to: ASSGLPLIGHFLGLS*GVTNVVSFPLRPVP Trigger: AGGCACTGGCCTAAGAGGAAAAGAAACCACATTAGTCACACCGCAGGACAGCCCTAGAAAGTGCCCAATCAAGGGTAGCCCTGAGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543125.5
CDS GCA 90 bp	CACTCATTCGTCCCGCATTCATTTGCCCAACAAATATTTCCCAAGTaGCTACTCTCTGCCAGGCATGGGAAATGCCAAGTGAAACAAGAC	+
Preference number: 5 (lower is better) Translates to: HSFVPHSFAQQIFPK*LLSARHGKCQVKQD Trigger: GTCTTGTTTCACTTGGCATTTCCCATGCCTGGCAGAGAGTAGGCACTTGGGAAATATTTGTTGGGCAAATGAATGCGGGACGAATGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538258.1
CDS TCA 72 bp	GGAGGCTCCCTGCCCAAGTGGCAGACTCTCGCAGTGTaGCACCGTCACTCTGTAGTCCTCCTGCTGCCTGTT	+
Preference number: 6 (lower is better) Translates to: GGSLPKWQTLAV*HRHSVVLLLPV Trigger: AACAGGCAGCAGGAGGACTACAGAGTGACGGTGTCACACTGCGAGAGTCTGCCACTTGGGCAGGGAGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537954.5
CDS GCA 72 bp	AGACAGCCTCACAGTTCCAGGCTGCAGGGAGCTCCCTaGCTAGCTGGCAAGATAAGTTATGTTGGCAGAAGG	+
Preference number: 6 (lower is better) Translates to: RQPHSSRLQGAP*LAGKISYVGRR Trigger: CCTTCTGCCAACATAACTTATCTTGCCAGCTAGGCAGGGAGCTCCCTGCAGCCTGGAACTGTGAGGCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538258.1
CDS GCA 72 bp	TCACTCTGTAGTCCTCCTGCTGCCTGTTCCTTTCATTaGTTTGCGAGACCCCTTGATGACTGTGTTTGTCTC	+
Preference number: 6 (lower is better) Translates to: SLCSPPAACSFH*FARPLDDCVCL Trigger: GAGACAAACACAGTCATCAAGGGGTCTCGCAAAGCAATGAAAGGAACAGGCAGCAGGAGGACTACAGAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537954.5
CDS GCA 72 bp	CTAATGTGGTTTCTTTTCCTCTTAGGCCAGTGCCTATaGAGTGGGCACTGTCACTGTTATTTCCACTTACCA	+
Preference number: 6 (lower is better) Translates to: LMWFLFLLGQCL*SGHCHCYFHLP Trigger: TGGTAAGTGGAAATAACAGTGACAGTGCCCACTGCATAGGCACTGGCCTAAGAGGAAAAGAAACCACATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543125.5

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