Pregenerated sensors for PFN4 (Homo sapiens)
Ensembl gene IDs: ENSG00000176732Ensembl transcript IDs: ENST00000313213.5, ENST00000436622.1, ENST00000465360.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGTTGAATGGCCTTTGCAATCCCTTCTCCCAAGTCTCACCGGGGTaGTGTGAGCCAGACAGATGTCACACATGCAGGGAGTTGTATTAC | + |
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Preference number: 1 (lower is better) Translates to: LLNGLCNPFSQVSPG*CEPDRCHTCRELYY Trigger: GTAATACAACTCCCTGCATGTGTGACATCTGTCTGGCTCACATCACCCCGGTGAGACTTGGGAGAAGGGATTGCAAAGGCCATTCAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR TCA 90 bp | GCTTGCTGCAACCTAACCCTGAGAAATGTCTTGGATAAAGAGTGGTaGGAGCCTTGCATTCTTGGCATACTTAGCAAGGTGTGTAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: ACCNLTLRNVLDKEW*EPCILGILSKVCRS Trigger: ACTCCTACACACCTTGCTAAGTATGCCAAGAATGCAAGGCTCTCACCACTCTTTATCCAAGACATTTCTCAGGGTTAGGTTGCAGCAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR-3UTR TCA 90 bp | GCAAATGGGAGTGTGAAATGTCCATTGAATACCTTGACTAGTGGTCCATTGTTGCTCACCGGGGTGATGTaGGCCAGACAGATGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: ANGSVKCPLNTLTSGPLLLTGVM*ARQMSH Trigger: GTGTGACATCTGTCTGGCTCACATCACCCCGGTGAG...CAACAATGGACCACTAGTCAAGGTATTCAATGGACATTTCACACTCCCATTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR-3UTR GCA 90 bp | GGAGACCAAGAGGAGATGAACTCTTTCTGGGGAAGGGTGCATTTAGTGACCATAGACAGATGTCACACATaGAGGGAGTTGTATTACAGG | + |
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Preference number: 2 (lower is better) Translates to: GDQEEMNSFWGRVHLVTIDRCHT*RELYYR Trigger: CCTGTAATACAACTCCCTGCATGTGTGACATCTGTC...TATGGTCACTAAATGCACCCTTCCCCAGAAAGAGTTCATCTCCTCTTGGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR-3UTR TCA 90 bp | ATACTTAGCAAGGTGTGTAGGAGTACAAGAGCCTCACAGAAAGGAGCCTCCCAAATATGCTCTGTGAAATaGTCAGTGCTCTCTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: ILSKVCRSTRASQKGASQICSVK*SVLSHS Trigger: GGAATGAGAGAGCACTGATCATTTCACAGAGCATAT...TTGGGAGGCTCCTTTCTGTGAGGCTCTTGTACTCCTACACACCTTGCTAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR-3UTR GCA 90 bp | CTCTTTCTGGGGAAGGGTGCATTTAGTGACCATACTGCCTTACTAAGGTGTGCATTCAAGGTTGCTTGCTaGAACCTAACCCTGAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: LFLGKGAFSDHTALLRCAFKVAC*NLTLRN Trigger: ATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAA...TGCACACCTTAGTAAGGCAGTATGGTCACTAAATGCACCCTTCCCCAGAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR-3UTR CCA 90 bp | GAACTCTTTCTGGGGAAGGGTGCATTTAGTGACCATACTGCCTTACTAAGGTGTTGGTCCATTGTTGAATaGCCTTTGCAATCCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: ELFLGKGAFSDHTALLRCWSIVE*PLQSLL Trigger: GAGAAGGGATTGCAAAGGCCATTCAACAATGGACCA...ACACCTTAGTAAGGCAGTATGGTCACTAAATGCACCCTTCCCCAGAAAGAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR CAA 90 bp | TACCAGATACCTGCAAATGGGAGTGTGAAATGTCCATTGAATACCTaGACTAGTGGTCCATTGTTGAATGGCCTTTGCAATCCCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: YQIPANGSVKCPLNT*TSGPLLNGLCNPFS Trigger: GGAGAAGGGATTGCAAAGGCCATTCAACAATGGACCACTAGTCAAGGTATTCAATGGACATTTCACACTCCCATTTGCAGGTATCTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTTACTAAGGTGTGCAGTGAGAGTTAGGGTTAGAGTCAGAAATCTTTTTGAGCCAGATACCTGCAAATaGGAGTGTGAAATGTCCATT | + |
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Preference number: 2 (lower is better) Translates to: ALLRCAVRVRVRVRNLFEPDTCK*ECEMSI Trigger: AATGGACATTTCACACTCCCATTTGCAGGTATCTGG...CTCAAAAAGATTTCTGACTCTAACCCTAACTCTCACTGCACACCTTAGTAAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR TCA 72 bp | GGCCTTTGCAATCCCTTCTCCCAAGTCTCACCGGGGTaGTGTGAGCCAGACAGATGTCACACATGCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: GLCNPFSQVSPG*CEPDRCHTCRE Trigger: CTCCCTGCATGTGTGACATCTGTCTGGCTCACATCACCCCGGTGAGACTTGGGAGAAGGGATTGCAAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR-3UTR CAA 90 bp | GAACTCTTTCTGGGGAAGGGTGCATTTAGTGACCATACTGCCTTACTAAGGTGTCACACATGCAGGGAGTaGTATTACAGGAGGGGTAAC | + |
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Preference number: 3 (lower is better) Translates to: ELFLGKGAFSDHTALLRCHTCRE*YYRRGN Trigger: GTTACCCCTCCTGTAATACAACTCCCTGCATGTGTG...ACACCTTAGTAAGGCAGTATGGTCACTAAATGCACCCTTCCCCAGAAAGAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR GCA 72 bp | ATGGGAGACATCCCTTCATTTTTCAAGGTTGCTTGCTaGAACCTAACCCTGAGAAATGTCTTGGATAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: MGDIPSFFKVAC*NLTLRNVLDKE Trigger: CTCTTTATCCAAGACATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAAAAATGAAGGGATGTCTCCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR GCA 72 bp | CTGATGGGAGACATCCCTTCATTTTTCAAGGTTGCTTaGTGCAACCTAACCCTGAGAAATGTCTTGGATAAA | + |
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Preference number: 3 (lower is better) Translates to: LMGDIPSFFKVA*CNLTLRNVLDK Trigger: TTTATCCAAGACATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAAAAATGAAGGGATGTCTCCCATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR TCA 72 bp | TTTATAGCAAACAGTAAGCAAGCTTGCTCTCTGTCCTaGTGGGAGACATCCCTTCATTTTTCAAGGTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: FIANSKQACSLS*WETSLHFSRLL Trigger: AAGCAACCTTGAAAAATGAAGGGATGTCTCCCATCAGGACAGAGAGCAAGCTTGCTTACTGTTTGCTATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR GCA 72 bp | AAGGCCTTTCCAATGTTCAAAATGATACCAGATACCTaGAAATGGGAGTGTGAAATGTCCATTGAATACCTT | + |
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Preference number: 3 (lower is better) Translates to: KAFPMFKMIPDT*KWECEMSIEYL Trigger: AAGGTATTCAATGGACATTTCACACTCCCATTTGCAGGTATCTGGTATCATTTTGAACATTGGAAAGGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR GCA 90 bp | GCATTTAGTGACCATACTGCCTTACTAAGGTGTGCAGTGAGAGTTAGGGTTAGAGTCAACGGACGCGGTTaGGGGTGGGTGGCGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: AFSDHTALLRCAVRVRVRVNGRG*GWVAAA Trigger: TGCCGCCGCCACCCACCCGCAACCGCGTCCGTTGAC...TCTAACCCTAACTCTCACTGCACACCTTAGTAAGGCAGTATGGTCACTAAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR GCA 90 bp | GAAAGGAGCCTCCCAATAGATATGCTCTGTGAAATGATCAGTGCTCTCTCATTCCACCCCGCTCTGTGGTaGCCGCAAGGACCCGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: ERSLPIDMLCEMISALSFHPALW*PQGPGD Trigger: GTCGCCGGGTCCTTGCGGGCACCACAGAGCGGGGTG...GAATGAGAGAGCACTGATCATTTCACAGAGCATATCTATTGGGAGGCTCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CCA 90 bp | GCCTTACTAAGGTGTGCAGTGAGAGTTAGGGTTAGAGTCAGAAATCTTTTTGAGCGCCACCCCGCTCTGTaGTGCCCGCAAGGACCCGGC | + |
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Preference number: 4 (lower is better) Translates to: ALLRCAVRVRVRVRNLFERHPAL*CPQGPG Trigger: GCCGGGTCCTTGCGGGCACCACAGAGCGGGGTGGCG...CTCAAAAAGATTTCTGACTCTAACCCTAACTCTCACTGCACACCTTAGTAAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR TCA 90 bp | ATCCCTTCATTTTTCAAGGTTGCTTGCTGCAACCTAACCCTGAGAAATGTCTTGCGGGGCAGGGGGTGGTaGGCGGTGAATTCCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: IPSFFKVACCNLTLRNVLRGRGW*AVNSLA Trigger: TGCCAGGGAATTCACCGCTCACCACCCCCTGCCCCG...CAAGACATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAAAAATGAAGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR TCA 90 bp | GCCTTACTAAGGTGTGCAGTGAGAGTTAGGGTTAGAGTCAGAAATCTTTTTGAGGGGGGTGGTGAGCGGTaGATTCCCTGGCACCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: ALLRCAVRVRVRVRNLFEGGGER*IPWHRG Trigger: TCCTCGGTGCCAGGGAATTCACCGCTCACCACCCCC...CTCAAAAAGATTTCTGACTCTAACCCTAACTCTCACTGCACACCTTAGTAAGGC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR TCA 90 bp | GGAGACCAAGAGGAGATGAACTCTTTCTGGGGAAGGGTGCATTTAGTGACCATACTCACCGGGGTGATGTaGGCCAGACAGATGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: GDQEEMNSFWGRVHLVTILTGVM*ARQMSH Trigger: GTGTGACATCTGTCTGGCTCACATCACCCCGGTGAG...TATGGTCACTAAATGCACCCTTCCCCAGAAAGAGTTCATCTCCTCTTGGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR GCA 90 bp | GCATTTAGTGACCATACTGCCTTACTAAGGTGTGCAGTGAGAGTTAGGGTTAGACCCGTTTCCCGCCACTaGCTTCCAGTGGTTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: AFSDHTALLRCAVRVRVRPVSRH*LPVVWS Trigger: GGACCAAACCACTGGAAGGCAGTGGCGGGAAACGGG...TCTAACCCTAACTCTCACTGCACACCTTAGTAAGGCAGTATGGTCACTAAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CCA 90 bp | ATCCCTTCATTTTTCAAGGTTGCTTGCTGCAACCTAACCCTGAGAAATGTCTTGGCCACTGCCTTCCAGTaGTTTGGTCCCCGAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: IPSFFKVACCNLTLRNVLATAFQ*FGPRAG Trigger: TCCTGCTCGGGGACCAAACCACTGGAAGGCAGTGGC...CAAGACATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAAAAATGAAGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CCA 90 bp | AGCTTGCTCTCTGTCCTGATGGGAGACATCCCTTCATTTTTCAAGGTTGCTTGCCACAAGCTCCGCTCCTaGATTTTGATGAGGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SLLSVLMGDIPSFFKVACHKLRS*ILMRAA Trigger: TGCAGCCCTCATCAAAATCCAGGAGCGGAGCTTGTG...GCAAGCAACCTTGAAAAATGAAGGGATGTCTCCCATCAGGACAGAGAGCAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR TCA 90 bp | ATACTTAGCAAGGTGTGTAGGAGTACAAGAGCCTCACAGAAAGGAGCCTCCCAATACATTGAAACCTGGTaGTGCTACACACAAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: ILSKVCRSTRASQKGASQYIETW*CYTQAP Trigger: CGGAGCTTGTGTGTAGCATCACCAGGTTTCAATGTA...TTGGGAGGCTCCTTTCTGTGAGGCTCTTGTACTCCTACACACCTTGCTAAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR TCA 90 bp | CCCTTCATTTTTCAAGGTTGCTTGCTGCAACCTAACCCTGAGAAATGTCTTGGAGAGACCAAGAGGAGATaGACTCTTTCTGGGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PFIFQGCLLQPNPEKCLGETKRR*TLSGEG Trigger: CCCTTCCCCAGAAAGAGTTCATCTCCTCTTGGTCTC...TCCAAGACATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAAAAATGAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CCA 90 bp | GAACTCTTTCTGGGGAAGGGTGCATTTAGTGACCATACTGCCTTACTAAGGTGTCACTGTCCACATGCTTaGTTCCCAAGAGGGTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: ELFLGKGAFSDHTALLRCHCPHA*FPRGCL Trigger: TAGACACCCTCTTGGGAACCAAGCATGTGGACAGTG...ACACCTTAGTAAGGCAGTATGGTCACTAAATGCACCCTTCCCCAGAAAGAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR TCA 90 bp | CCCTTCATTTTTCAAGGTTGCTTGCTGCAACCTAACCCTGAGAAATGTCTTGGACACTGGGCGTTACATTaGAACCTGGTGATGCTACAC | + |
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Preference number: 4 (lower is better) Translates to: PFIFQGCLLQPNPEKCLGHWALH*NLVMLH Trigger: GTGTAGCATCACCAGGTTTCAATGTAACGCCCAGTG...TCCAAGACATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAAAAATGAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CCA 90 bp | TGTGAAATGATCAGTGCTCTCTCATTCCATGCCGATGACCAACACTTATTAAAATGCCTTCCAGTGGTTTaGTCCCCGAGCAGGACCCAA | + |
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Preference number: 4 (lower is better) Translates to: CEMISALSFHADDQHLLKCLPVV*SPSRTQ Trigger: TTGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCA...TTTTAATAAGTGTTGGTCATCGGCATGGAATGAGAGAGCACTGATCATTTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTGGGGAAGGGTGCATTTAGTGACCATACTGCCTTACTAAGGTGTGCAACCAGAAGATACAGATaGGTCTTCACGACAACCACA | + |
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Preference number: 4 (lower is better) Translates to: LFLGKGAFSDHTALLRCATRRYR*VFTTTT Trigger: TGTGGTTGTCGTGAAGACCCATCTGTATCTTCTGGT...TGCACACCTTAGTAAGGCAGTATGGTCACTAAATGCACCCTTCCCCAGAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CCA 90 bp | TACTTAGCAAGGTGTGTAGGAGTACAAGAGCCTCACAGAAAGGAGCCTCCCAATGAGATGAACTCTTTCTaGGGAAGGGTGCATTTAGTG | + |
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Preference number: 4 (lower is better) Translates to: YLARCVGVQEPHRKEPPNEMNSF*GRVHLV Trigger: CACTAAATGCACCCTTCCCCAGAAAGAGTTCATCTC...ATTGGGAGGCTCCTTTCTGTGAGGCTCTTGTACTCCTACACACCTTGCTAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR TCA 90 bp | AGCTTGCTCTCTGTCCTGATGGGAGACATCCCTTCATTTTTCAAGGTTGCTTGCATATGCTCTGTGAAATaGTCAGTGCTCTCTCATTCC | + |
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Preference number: 4 (lower is better) Translates to: SLLSVLMGDIPSFFKVACICSVK*SVLSHS Trigger: GGAATGAGAGAGCACTGATCATTTCACAGAGCATAT...GCAAGCAACCTTGAAAAATGAAGGGATGTCTCCCATCAGGACAGAGAGCAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR GCA 90 bp | GAAAGGAGCCTCCCAATAGATATGCTCTGTGAAATGATCAGTGCTCTCTCATTCCCTTCTCTTCGGGCTTaGAAAGGGTTCTTGGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: ERSLPIDMLCEMISALSFPSLRA*KGFLAN Trigger: ATTTGCCAAGAACCCTTTGCAAGCCCGAAGAGAAGG...GAATGAGAGAGCACTGATCATTTCACAGAGCATATCTATTGGGAGGCTCCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR GCA 90 bp | ATACTTAGCAAGGTGTGTAGGAGTACAAGAGCCTCACAGAAAGGAGCCTCCCAATTCAAGGTTGCTTGCTaGAACCTAACCCTGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: ILSKVCRSTRASQKGASQFKVAC*NLTLRN Trigger: ATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAA...TTGGGAGGCTCCTTTCTGTGAGGCTCTTGTACTCCTACACACCTTGCTAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CCA 90 bp | ATACTTAGCAAGGTGTGTAGGAGTACAAGAGCCTCACAGAAAGGAGCCTCCCAACCAGATACCTGCAAATaGGAGTGTGAAATGTCCATT | + |
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Preference number: 4 (lower is better) Translates to: ILSKVCRSTRASQKGASQPDTCK*ECEMSI Trigger: AATGGACATTTCACACTCCCATTTGCAGGTATCTGG...TTGGGAGGCTCCTTTCTGTGAGGCTCTTGTACTCCTACACACCTTGCTAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR TCA 90 bp | ATCCCTTCATTTTTCAAGGTTGCTTGCTGCAACCTAACCCTGAGAAATGTCTTGCTAGTGGTCCATTGTTaGATGGCCTTTGCAATCCCT | + |
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Preference number: 4 (lower is better) Translates to: IPSFFKVACCNLTLRNVLLVVHC*MAFAIP Trigger: AGGGATTGCAAAGGCCATTCAACAATGGACCACTAG...CAAGACATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAAAAATGAAGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR GCA 90 bp | ATACCTGCAAATGGGAGTGTGAAATGTCCATTGAATACCTTGACTAGTGGTCCAGATTTTGATGAGGGCTaGACTGTCCACATGCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: IPANGSVKCPLNTLTSGPDFDEG*TVHMLG Trigger: ACCAAGCATGTGGACAGTGCAGCCCTCATCAAAATC...TGGACCACTAGTCAAGGTATTCAATGGACATTTCACACTCCCATTTGCAGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR GCA 90 bp | CCCTTCATTTTTCAAGGTTGCTTGCTGCAACCTAACCCTGAGAAATGTCTTGGAGCCCTCAGTGTAAGTTaGTACCAGAAGATACAGATG | + |
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Preference number: 4 (lower is better) Translates to: PFIFQGCLLQPNPEKCLGALSVS*YQKIQM Trigger: CATCTGTATCTTCTGGTAGCAACTTACACTGAGGGC...TCCAAGACATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAAAAATGAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR GCA 90 bp | AGCTTGCTCTCTGTCCTGATGGGAGACATCCCTTCATTTTTCAAGGTTGCTTGCATGATACCAGATACCTaGAAATGGGAGTGTGAAATG | + |
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Preference number: 4 (lower is better) Translates to: SLLSVLMGDIPSFFKVACMIPDT*KWECEM Trigger: CATTTCACACTCCCATTTGCAGGTATCTGGTATCAT...GCAAGCAACCTTGAAAAATGAAGGGATGTCTCCCATCAGGACAGAGAGCAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR CAA 72 bp | ATGTCTTGGATAAAGAGTGGTGAGAGCCTTGCATTCTaGGCATACTTAGCAAGGTGTGTAGGAGTACAAGAG | + |
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Preference number: 4 (lower is better) Translates to: MSWIKSGESLAF*AYLARCVGVQE Trigger: CTCTTGTACTCCTACACACCTTGCTAAGTATGCCAAGAATGCAAGGCTCTCACCACTCTTTATCCAAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR GCA 90 bp | GAACTCTTTCTGGGGAAGGGTGCATTTAGTGACCATACTGCCTTACTAAGGTGTTCTAACAATAAGCTCTaGAAATGGCTCATGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: ELFLGKGAFSDHTALLRCSNNKL*KWLMFP Trigger: AGGGAACATGAGCCATTTGCAGAGCTTATTGTTAGA...ACACCTTAGTAAGGCAGTATGGTCACTAAATGCACCCTTCCCCAGAAAGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR GCA 90 bp | GAACTCTTTCTGGGGAAGGGTGCATTTAGTGACCATACTGCCTTACTAAGGTGTAAGAGAATATTCATCTaGCCGGACACATCTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: ELFLGKGAFSDHTALLRCKRIFI*PDTSVI Trigger: GATTACAGATGTGTCCGGGCAGATGAATATTCTCTT...ACACCTTAGTAAGGCAGTATGGTCACTAAATGCACCCTTCCCCAGAAAGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CCA 90 bp | ATACCTGCAAATGGGAGTGTGAAATGTCCATTGAATACCTTGACTAGTGGTCCATGGTCCATTGTTGAATaGCCTTTGCAATCCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: IPANGSVKCPLNTLTSGPWSIVE*PLQSLL Trigger: GAGAAGGGATTGCAAAGGCCATTCAACAATGGACCA...TGGACCACTAGTCAAGGTATTCAATGGACATTTCACACTCCCATTTGCAGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR CAA 72 bp | AAATGTCCATTGAATACCTTGACTAGTGGTCCATTGTaGAATGGCCTTTGCAATCCCTTCTCCCAAGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: KCPLNTLTSGPL*NGLCNPFSQVS Trigger: TGAGACTTGGGAGAAGGGATTGCAAAGGCCATTCAACAATGGACCACTAGTCAAGGTATTCAATGGACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR CAA 72 bp | CCTGCAAATGGGAGTGTGAAATGTCCATTGAATACCTaGACTAGTGGTCCATTGTTGAATGGCCTTTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: PANGSVKCPLNT*TSGPLLNGLCN Trigger: ATTGCAAAGGCCATTCAACAATGGACCACTAGTCAAGGTATTCAATGGACATTTCACACTCCCATTTGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| 3UTR CAA 72 bp | TACCAGATACCTGCAAATGGGAGTGTGAAATGTCCATaGAATACCTTGACTAGTGGTCCATTGTTGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: YQIPANGSVKCP*NTLTSGPLLNG Trigger: GCCATTCAACAATGGACCACTAGTCAAGGTATTCAATGGACATTTCACACTCCCATTTGCAGGTATCTGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR TCA 90 bp | GGAGACATCCCTTCATTTTTCAAGGTTGCTTGCTGCAACCTAACCCTGAGAAATTGTAATCTTTTCCCTTaGAATACAGTCCTTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GDIPSFFKVACCNLTLRNCNLFP*NTVLLF Trigger: GAAGAGAAGGACTGTATTTCAAGGGAAAAGATTACA...ATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAAAAATGAAGGGATGTCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CCA 90 bp | TGTGAAATGATCAGTGCTCTCTCATTCCATGCCGATGACCAACACTTATTAAAACTTGCAAAGGGTTCTTaGCAAATCCATTCACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CEMISALSFHADDQHLLKLAKGS*QIHSPV Trigger: CACTGGTGAATGGATTTGCCAAGAACCCTTTGCAAG...TTTTAATAAGTGTTGGTCATCGGCATGGAATGAGAGAGCACTGATCATTTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR GCA 90 bp | AGTAATTCCAGTGAAAGAAGAGGATCTCTGGAAGTAATAAAAATTGCTCCCTTAGACAGATGTCACACATaGAGGGAGTTGTATTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSSERRGSLEVIKIAPLDRCHT*RELYYR Trigger: CCTGTAATACAACTCCCTGCATGTGTGACATCTGTC...TAAGGGAGCAATTTTTATTACTTCCAGAGATCCTCTTCTTTCACTGGAATTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS GCA 90 bp | CGCAAGGACCCGGCGACCAAGGACCCGACCGTCAACGGACGCGGTTaGGGGTGGGTGGCGGCGGCAGGATTGGCCGGGCCACGCGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RKDPATKDPTVNGRG*GWVAAAGLAGPRAG Trigger: ACCGGCGCGTGGCCCGGCCAATCCTGCCGCCGCCACCCACCCGCAACCGCGTCCGTTGACGGTCGGGTCCTTGGTCGCCGGGTCCTTGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS CCA 90 bp | GACCCGGCGACCAAGGACCCGACCGTCAACGGACGCGGTTGCGGGTaGGTGGCGGCGGCAGGATTGGCCGGGCCACGCGCCGGTCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: DPATKDPTVNGRGCG*VAAAGLAGPRAGHR Trigger: TCGGTGACCGGCGCGTGGCCCGGCCAATCCTGCCGCCGCCACCCACCCGCAACCGCGTCCGTTGACGGTCGGGTCCTTGGTCGCCGGGTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS CCA 90 bp | CGACCGTCAACGGACGCGGTTGCGGGTGGGTGGCGGCGGCAGGATTaGCCGGGCCACGCGCCGGTCACCGAGAAGCAGCGACTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPSTDAVAGGWRRQD*PGHAPVTEKQRLQP Trigger: GGGCTGGAGTCGCTGCTTCTCGGTGACCGGCGCGTGGCCCGGCCAATCCTGCCGCCGCCACCCACCCGCAACCGCGTCCGTTGACGGTCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS CCA 90 bp | CGGCGACCAAGGACCCGACCGTCAACGGACGCGGTTGCGGGTGGGTaGCGGCGGCAGGATTGGCCGGGCCACGCGCCGGTCACCGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRPRTRPSTDAVAGG*RRQDWPGHAPVTEK Trigger: CTTCTCGGTGACCGGCGCGTGGCCCGGCCAATCCTGCCGCCGCCACCCACCCGCAACCGCGTCCGTTGACGGTCGGGTCCTTGGTCGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS GCA 90 bp | CTGGCACCGAGGACTCGAGGGAGCGGACGCCACCCCGCTCTGTGGTaGCCGCAAGGACCCGGCGACCAAGGACCCGACCGTCAACGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LAPRTRGSGRHPALW*PQGPGDQGPDRQRT Trigger: CGTCCGTTGACGGTCGGGTCCTTGGTCGCCGGGTCCTTGCGGGCACCACAGAGCGGGGTGGCGTCCGCTCCCTCGAGTCCTCGGTGCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000313213.5 ENST00000436622.1 ENST00000465360.1 |
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| CDS CCA 90 bp | TCCCTGGCACCGAGGACTCGAGGGAGCGGACGCCACCCCGCTCTGTaGTGCCCGCAAGGACCCGGCGACCAAGGACCCGACCGTCAACGG | + |
|
Preference number: 5 (lower is better) Translates to: SLAPRTRGSGRHPAL*CPQGPGDQGPDRQR Trigger: CCGTTGACGGTCGGGTCCTTGGTCGCCGGGTCCTTGCGGGCACCACAGAGCGGGGTGGCGTCCGCTCCCTCGAGTCCTCGGTGCCAGGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000313213.5 ENST00000436622.1 ENST00000465360.1 |
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| CDS GCA 90 bp | CATCACTGGGCGTTACCTCCGGCACAGGCGCCCGTTTCCCGCCACTaGCTTCCAGTGGTTTGGTCCCCGAGCAGGACCCAAGGCGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HHWALPPAQAPVSRH*LPVVWSPSRTQGGA Trigger: TGCCCCGCCTTGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCAGTGGCGGGAAACGGGCGCCTGTGCCGGAGGTAACGCCCAGTGATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465360.1 |
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| CDS GCA 90 bp | TCATGTTCCCTCAACTCTCCGGCACAGGCGCCCGTTTCCCGCCACTaGCTTCCAGTGGTTTGGTCCCCGAGCAGGACCCAAGGCGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCSLNSPAQAPVSRH*LPVVWSPSRTQGGA Trigger: TGCCCCGCCTTGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCAGTGGCGGGAAACGGGCGCCTGTGCCGGAGAGTTGAGGGAACATGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS GCA 90 bp | TTTACATCAGGATTATCTCCGGCACAGGCGCCCGTTTCCCGCCACTaGCTTCCAGTGGTTTGGTCCCCGAGCAGGACCCAAGGCGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FTSGLSPAQAPVSRH*LPVVWSPSRTQGGA Trigger: TGCCCCGCCTTGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCAGTGGCGGGAAACGGGCGCCTGTGCCGGAGATAATCCTGATGTAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS-3UTR CAA 90 bp | CAAACAGTAAGCAAGCTTGCTCTCTGTCCTGATGGGAGACATCCCTTCATTTTTCGTCAACGGACGCGGTaGCGGGTGGGTGGCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QTVSKLALCPDGRHPFIFRQRTR*RVGGGG Trigger: GCCGCCGCCACCCACCCGCAACCGCGTCCGTTGACG...AAAAATGAAGGGATGTCTCCCATCAGGACAGAGAGCAAGCTTGCTTACTGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS GCA 90 bp | CTGTCCACATGCTTGGTTCCCAAGAGGGTGTCTAACAATAAGCTCTaGAAATGGCTCATGTTCCCTCAACTCTCCGGCACAGGCGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSTCLVPKRVSNNKL*KWLMFPQLSGTGAR Trigger: ACGGGCGCCTGTGCCGGAGAGTTGAGGGAACATGAGCCATTTGCAGAGCTTATTGTTAGACACCCTCTTGGGAACCAAGCATGTGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS CCA 90 bp | GGCGTTACATTGAAACCTGGTGATGCTACACACAAGCTCCGCTCCTaGATTTTGATGAGGGCTGCACTGTCCACATGCTTGGTTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVTLKPGDATHKLRS*ILMRAALSTCLVPK Trigger: CTTGGGAACCAAGCATGTGGACAGTGCAGCCCTCATCAAAATCCAGGAGCGGAGCTTGTGTGTAGCATCACCAGGTTTCAATGTAACGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS GCA 90 bp | CACAAGCTCCGCTCCTGGATTTTGATGAGGGCTGCACTGTCCACATaGTTGGTTCCCAAGAGGGTGTCTAACAATAAGCTCTGCAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: HKLRSWILMRAALST*LVPKRVSNNKLCKW Trigger: CCATTTGCAGAGCTTATTGTTAGACACCCTCTTGGGAACCAAGCATGTGGACAGTGCAGCCCTCATCAAAATCCAGGAGCGGAGCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CAA 90 bp | GAGAAGGCCTTTCCAATGTTCAAAATGATACCAGATACCTGCAAATGGGAGTGTCTGCCTTCCAGTGGTTaGGTCCCCGAGCAGGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: EKAFPMFKMIPDTCKWECLPSSG*VPEQDP Trigger: TGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCAG...ACACTCCCATTTGCAGGTATCTGGTATCATTTTGAACATTGGAAAGGCCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CAA 90 bp | GGAGACCAAGAGGAGATGAACTCTTTCTGGGGAAGGGTGCATTTAGTGACCATAGCACTGTCCACATGCTaGGTTCCCAAGAGGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GDQEEMNSFWGRVHLVTIALSTC*VPKRVS Trigger: AGACACCCTCTTGGGAACCAAGCATGTGGACAGTGC...TATGGTCACTAAATGCACCCTTCCCCAGAAAGAGTTCATCTCCTCTTGGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CAA 90 bp | GCATTTAGTGACCATACTGCCTTACTAAGGTGTGCAGTGAGAGTTAGGGTTAGACTCCGCTCCTGGATTTaGATGAGGGCTGCACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AFSDHTALLRCAVRVRVRLRSWI*MRAALS Trigger: GGACAGTGCAGCCCTCATCAAAATCCAGGAGCGGAG...TCTAACCCTAACTCTCACTGCACACCTTAGTAAGGCAGTATGGTCACTAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS GCA 90 bp | TGTGGCTTCCACACAGATGCTAGGATACATGCCCTCAGTGTAAGTTaGTACCAGAAGATACAGATGGGTCTTCACGACAACCACACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CGFHTDARIHALSVS*YQKIQMGLHDNHTS Trigger: ACTGGTGTGGTTGTCGTGAAGACCCATCTGTATCTTCTGGTAGCAACTTACACTGAGGGCATGTATCCTAGCATCTGTGTGGAAGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313213.5 ENST00000465360.1 |
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| CDS-3UTR CAA 90 bp | CTCTTTCTGGGGAAGGGTGCATTTAGTGACCATACTGCCTTACTAAGGTGTGCACACACATGCAGGGAGTaGTATTACAGGAGGGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LFLGKGAFSDHTALLRCAHTCRE*YYRRGN Trigger: GTTACCCCTCCTGTAATACAACTCCCTGCATGTGTG...TGCACACCTTAGTAAGGCAGTATGGTCACTAAATGCACCCTTCCCCAGAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CAA 90 bp | CTCTTTCTGGGGAAGGGTGCATTTAGTGACCATACTGCCTTACTAAGGTGTGCAGCTTGCAAAGGGTTCTaGGCAAATCCATTCACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFLGKGAFSDHTALLRCAACKGF*ANPFTS Trigger: ACTGGTGAATGGATTTGCCAAGAACCCTTTGCAAGC...TGCACACCTTAGTAAGGCAGTATGGTCACTAAATGCACCCTTCCCCAGAAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CAA 90 bp | GGAGACATCCCTTCATTTTTCAAGGTTGCTTGCTGCAACCTAACCCTGAGAAATTCCTTCTCTTCGGGCTaGCAAAGGGTTCTTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GDIPSFFKVACCNLTLRNSFSSG*QRVLGK Trigger: TTTGCCAAGAACCCTTTGCAAGCCCGAAGAGAAGGA...ATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAAAAATGAAGGGATGTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CAA 90 bp | GAAAGGAGCCTCCCAATAGATATGCTCTGTGAAATGATCAGTGCTCTCTCATTCTCACTGGGCGTTACATaGAAACCTGGTGATGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: ERSLPIDMLCEMISALSFSLGVT*KPGDAT Trigger: TGTAGCATCACCAGGTTTCAATGTAACGCCCAGTGA...GAATGAGAGAGCACTGATCATTTCACAGAGCATATCTATTGGGAGGCTCCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS TCA 90 bp | AAAGAGAATATTCATCTGCCCGGACACATCTGTAATCTTTTCCCTTaGAATACAGTCCTTCTCTTCGGGCTTGCAAAGGGTTCTTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KENIHLPGHICNLFP*NTVLLFGLAKGSWQ Trigger: TTGCCAAGAACCCTTTGCAAGCCCGAAGAGAAGGACTGTATTTCAAGGGAAAAGATTACAGATGTGTCCGGGCAGATGAATATTCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000313213.5 ENST00000465360.1 |
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| CDS-3UTR CAA 90 bp | GCCTTACTAAGGTGTGCAGTGAGAGTTAGGGTTAGAGTCAGAAATCTTTTTGAGTGTCCATTGAATACCTaGACTAGTGGTCCATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLRCAVRVRVRVRNLFECPLNT*TSGPLL Trigger: CAACAATGGACCACTAGTCAAGGTATTCAATGGACA...CTCAAAAAGATTTCTGACTCTAACCCTAACTCTCACTGCACACCTTAGTAAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CAA 90 bp | CCCTTCATTTTTCAAGGTTGCTTGCTGCAACCTAACCCTGAGAAATGTCTTGGAAGTGTGAAATGTCCATaGAATACCTTGACTAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PFIFQGCLLQPNPEKCLGSVKCP*NTLTSG Trigger: ACCACTAGTCAAGGTATTCAATGGACATTTCACACT...TCCAAGACATTTCTCAGGGTTAGGTTGCAGCAAGCAACCTTGAAAAATGAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS-3UTR CAA 90 bp | AGTAATTCCAGTGAAAGAAGAGGATCTCTGGAAGTAATAAAAATTGCTCCCTTATGCCCTCAGTGTAAGTaGCTACCAGAAGATACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SNSSERRGSLEVIKIAPLCPQCK*LPEDTD Trigger: ATCTGTATCTTCTGGTAGCAACTTACACTGAGGGCA...TAAGGGAGCAATTTTTATTACTTCCAGAGATCCTCTTCTTTCACTGGAATTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS CAA 90 bp | CCGCAAGGACCCGGCGACCAAGGACCCGACCGTCAACGGACGCGGTaGCGGGTGGGTGGCGGCGGCAGGATTGGCCGGGCCACGCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PQGPGDQGPDRQRTR*RVGGGGRIGRATRR Trigger: CCGGCGCGTGGCCCGGCCAATCCTGCCGCCGCCACCCACCCGCAACCGCGTCCGTTGACGGTCGGGTCCTTGGTCGCCGGGTCCTTGCGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS CCA 72 bp | AGGACCCGACCGTCAACGGACGCGGTTGCGGGTGGGTaGCGGCGGCAGGATTGGCCGGGCCACGCGCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RTRPSTDAVAGG*RRQDWPGHAPV Trigger: GACCGGCGCGTGGCCCGGCCAATCCTGCCGCCGCCACCCACCCGCAACCGCGTCCGTTGACGGTCGGGTCCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS CAA 72 bp | CCCGGCGACCAAGGACCCGACCGTCAACGGACGCGGTaGCGGGTGGGTGGCGGCGGCAGGATTGGCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGDQGPDRQRTR*RVGGGGRIGRA Trigger: GGCCCGGCCAATCCTGCCGCCGCCACCCACCCGCAACCGCGTCCGTTGACGGTCGGGTCCTTGGTCGCCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS GCA 72 bp | CCGGCGACCAAGGACCCGACCGTCAACGGACGCGGTTaGGGGTGGGTGGCGGCGGCAGGATTGGCCGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PATKDPTVNGRG*GWVAAAGLAGP Trigger: TGGCCCGGCCAATCCTGCCGCCGCCACCCACCCGCAACCGCGTCCGTTGACGGTCGGGTCCTTGGTCGCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS CCA 72 bp | ACGGACGCGGTTGCGGGTGGGTGGCGGCGGCAGGATTaGCCGGGCCACGCGCCGGTCACCGAGAAGCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: TDAVAGGWRRQD*PGHAPVTEKQR Trigger: TCGCTGCTTCTCGGTGACCGGCGCGTGGCCCGGCCAATCCTGCCGCCGCCACCCACCCGCAACCGCGTCCGT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS CAA 90 bp | CCGACCGTCAACGGACGCGGTTGCGGGTGGGTGGCGGCGGCAGGATaGGCCGGGCCACGCGCCGGTCACCGAGAAGCAGCGACTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PTVNGRGCGWVAAAG*AGPRAGHREAATPA Trigger: GGCTGGAGTCGCTGCTTCTCGGTGACCGGCGCGTGGCCCGGCCAATCCTGCCGCCGCCACCCACCCGCAACCGCGTCCGTTGACGGTCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS CCA 72 bp | CCGAGGACTCGAGGGAGCGGACGCCACCCCGCTCTGTaGTGCCCGCAAGGACCCGGCGACCAAGGACCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: PRTRGSGRHPAL*CPQGPGDQGPD Trigger: GTCGGGTCCTTGGTCGCCGGGTCCTTGCGGGCACCACAGAGCGGGGTGGCGTCCGCTCCCTCGAGTCCTCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000313213.5 ENST00000436622.1 ENST00000465360.1 |
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| CDS GCA 72 bp | AGGACTCGAGGGAGCGGACGCCACCCCGCTCTGTGGTaGCCGCAAGGACCCGGCGACCAAGGACCCGACCGT | + |
|
Preference number: 6 (lower is better) Translates to: RTRGSGRHPALW*PQGPGDQGPDR Trigger: ACGGTCGGGTCCTTGGTCGCCGGGTCCTTGCGGGCACCACAGAGCGGGGTGGCGTCCGCTCCCTCGAGTCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000313213.5 ENST00000436622.1 ENST00000465360.1 |
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| CDS CCA 72 bp | CGGCACAGGCGCCCGTTTCCCGCCACTGCCTTCCAGTaGTTTGGTCCCCGAGCAGGACCCAAGGCGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RHRRPFPATAFQ*FGPRAGPKAGQ Trigger: CTGCCCCGCCTTGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCAGTGGCGGGAAACGGGCGCCTGTGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000313213.5 ENST00000436622.1 ENST00000465360.1 |
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| CDS CAA 72 bp | ACAGGCGCCCGTTTCCCGCCACTGCCTTCCAGTGGTTaGGTCCCCGAGCAGGACCCAAGGCGGGGCAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGARFPPLPSSG*VPEQDPRRGRG Trigger: CCCCCTGCCCCGCCTTGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCAGTGGCGGGAAACGGGCGCCTGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000313213.5 ENST00000436622.1 ENST00000465360.1 |
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| CDS TCA 72 bp | AGCAGGACCCAAGGCGGGGCAGGGGGTGGTGAGCGGTaGATTCCCTGGCACCGAGGACTCGAGGGAGCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRTQGGAGGGER*IPWHRGLEGAD Trigger: GTCCGCTCCCTCGAGTCCTCGGTGCCAGGGAATTCACCGCTCACCACCCCCTGCCCCGCCTTGGGTCCTGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000313213.5 ENST00000436622.1 ENST00000465360.1 |
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| CDS GCA 72 bp | GCGTTACCTCCGGCACAGGCGCCCGTTTCCCGCCACTaGCTTCCAGTGGTTTGGTCCCCGAGCAGGACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: ALPPAQAPVSRH*LPVVWSPSRTQ Trigger: TTGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCAGTGGCGGGAAACGGGCGCCTGTGCCGGAGGTAACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465360.1 |
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| CDS GCA 72 bp | CTCAACTCTCCGGCACAGGCGCCCGTTTCCCGCCACTaGCTTCCAGTGGTTTGGTCCCCGAGCAGGACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LNSPAQAPVSRH*LPVVWSPSRTQ Trigger: TTGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCAGTGGCGGGAAACGGGCGCCTGTGCCGGAGAGTTGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS GCA 72 bp | GGATTATCTCCGGCACAGGCGCCCGTTTCCCGCCACTaGCTTCCAGTGGTTTGGTCCCCGAGCAGGACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GLSPAQAPVSRH*LPVVWSPSRTQ Trigger: TTGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCAGTGGCGGGAAACGGGCGCCTGTGCCGGAGATAATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436622.1 |
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| CDS CAA 72 bp | CCTGGTGATGCTACACACAAGCTCCGCTCCTGGATTTaGATGAGGGCTGCACTGTCCACATGCTTGGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGDATHKLRSWI*MRAALSTCLVP Trigger: GGGAACCAAGCATGTGGACAGTGCAGCCCTCATCAAAATCCAGGAGCGGAGCTTGTGTGTAGCATCACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS GCA 72 bp | TACACACAAGCTCCGCTCCTGGATTTTGATGAGGGCTaGACTGTCCACATGCTTGGTTCCCAAGAGGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YTQAPLLDFDEG*TVHMLGSQEGV Trigger: GACACCCTCTTGGGAACCAAGCATGTGGACAGTGCAGCCCTCATCAAAATCCAGGAGCGGAGCTTGTGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS CAA 90 bp | ACATTGAAACCTGGTGATGCTACACACAAGCTCCGCTCCTGGATTTaGATGAGGGCTGCACTGTCCACATGCTTGGTTCCCAAGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TLKPGDATHKLRSWI*MRAALSTCLVPKRV Trigger: CACCCTCTTGGGAACCAAGCATGTGGACAGTGCAGCCCTCATCAAAATCCAGGAGCGGAGCTTGTGTGTAGCATCACCAGGTTTCAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS CAA 90 bp | AAGCTCCGCTCCTGGATTTTGATGAGGGCTGCACTGTCCACATGCTaGGTTCCCAAGAGGGTGTCTAACAATAAGCTCTGCAAATGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KLRSWILMRAALSTC*VPKRVSNNKLCKWL Trigger: GAGCCATTTGCAGAGCTTATTGTTAGACACCCTCTTGGGAACCAAGCATGTGGACAGTGCAGCCCTCATCAAAATCCAGGAGCGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS CCA 72 bp | TTGAAACCTGGTGATGCTACACACAAGCTCCGCTCCTaGATTTTGATGAGGGCTGCACTGTCCACATGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LKPGDATHKLRS*ILMRAALSTCL Trigger: CAAGCATGTGGACAGTGCAGCCCTCATCAAAATCCAGGAGCGGAGCTTGTGTGTAGCATCACCAGGTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS CAA 72 bp | TCCTGGATTTTGATGAGGGCTGCACTGTCCACATGCTaGGTTCCCAAGAGGGTGTCTAACAATAAGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SWILMRAALSTC*VPKRVSNNKLC Trigger: GCAGAGCTTATTGTTAGACACCCTCTTGGGAACCAAGCATGTGGACAGTGCAGCCCTCATCAAAATCCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS TCA 72 bp | TGTTCGGACATCACTGGGCGTTACATTGAAACCTGGTaGTGCTACACACAAGCTCCGCTCCTGGATTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: CSDITGRYIETW*CYTQAPLLDFD Trigger: ATCAAAATCCAGGAGCGGAGCTTGTGTGTAGCATCACCAGGTTTCAATGTAACGCCCAGTGATGTCCGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313213.5 |
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| CDS TCA 72 bp | ATTCATCTGCCCGGACACATCTGTAATCTTTTCCCTTaGAATACAGTCCTTCTCTTCGGGCTTGCAAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: IHLPGHICNLFP*NTVLLFGLAKG Trigger: ACCCTTTGCAAGCCCGAAGAGAAGGACTGTATTTCAAGGGAAAAGATTACAGATGTGTCCGGGCAGATGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000313213.5 ENST00000465360.1 |
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