Pregenerated sensors for PFN3 (Homo sapiens)
Ensembl gene IDs: ENSG00000196570Ensembl transcript IDs: ENST00000358571.3
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCGGCGCACGGCCCACGCACACGGCGCGCGCGTCCAGCCCCTTGGTaGGTGCGTCCAGCACGCCGTCACCCTCGGCCAGCAGGTGGTCGC | + |
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Preference number: 5 (lower is better) Translates to: AAHGPRTRRARPAPW*VRPARRHPRPAGGR Trigger: GCGACCACCTGCTGGCCGAGGGTGACGGCGTGCTGGACGCACGCACCAAGGGGCTGGACGCGCGCGCCGTGTGCGTGGGCCGTGCGCCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS CCA 90 bp | CGCGCGGCGCACGGCCCACGCACACGGCGCGCGCGTCCAGCCCCTTaGTGCGTGCGTCCAGCACGCCGTCACCCTCGGCCAGCAGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: RAAHGPRTRRARPAP*CVRPARRHPRPAGG Trigger: ACCACCTGCTGGCCGAGGGTGACGGCGTGCTGGACGCACGCACCAAGGGGCTGGACGCGCGCGCCGTGTGCGTGGGCCGTGCGCCGCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS TCA 90 bp | CCACGCTCAGGCCCGCCTGCAGGAAGGTGTGCCTGTCCGGCCCCGTaGGCACGCCCACCTCCTGCGGCGAGATGGCCGCCAGCAGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PRSGPPAGRCACPAP*ARPPPAARWPPAGP Trigger: GGGGCCTGCTGGCGGCCATCTCGCCGCAGGAGGTGGGCGTGCTCACGGGGCCGGACAGGCACACCTTCCTGCAGGCGGGCCTGAGCGTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS GCA 90 bp | TGCAGGAAGGTGTGCCTGTCCGGCCCCGTGAGCACGCCCACCTCCTaGGGCGAGATGGCCGCCAGCAGGCCCCCGGGCCGCGAAGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: CRKVCLSGPVSTPTS*GEMAASRPPGREAH Trigger: GTGGGCTTCGCGGCCCGGGGGCCTGCTGGCGGCCATCTCGCCGCAGGAGGTGGGCGTGCTCACGGGGCCGGACAGGCACACCTTCCTGCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS GCA 90 bp | CGCACGGCCCACGCACACGGCGCGCGCGTCCAGCCCCTTGGTGCGTaGGTCCAGCACGCCGTCACCCTCGGCCAGCAGGTGGTCGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: RTAHAHGARVQPLGA*VQHAVTLGQQVVAD Trigger: ATCCGCGACCACCTGCTGGCCGAGGGTGACGGCGTGCTGGACGCACGCACCAAGGGGCTGGACGCGCGCGCCGTGTGCGTGGGCCGTGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS CCA 90 bp | AGCAGGCCCCCGGGCCGCGAAGCCCACACGCAGCTGTTGTCCGCATaGCCCACGATGGCCACGTCGTCGATGCGCTGGTCCCGCAGCACT | + |
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Preference number: 5 (lower is better) Translates to: SRPPGREAHTQLLSA*PTMATSSMRWSRST Trigger: AGTGCTGCGGGACCAGCGCATCGACGACGTGGCCATCGTGGGCCATGCGGACAACAGCTGCGTGTGGGCTTCGCGGCCCGGGGGCCTGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS TCA 90 bp | CCACGATGGCCACGTCGTCGATGCGCTGGTCCCGCAGCACTGCACTaGTGTAGACCTTCCAGTCGCCCATCGCGCTCCGAGTGCGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PRWPRRRCAGPAALH*CRPSSRPSRSECAQ Trigger: CTGGGCGCACTCGGAGCGCGATGGGCGACTGGAAGGTCTACATCAGTGCAGTGCTGCGGGACCAGCGCATCGACGACGTGGCCATCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS GCA 90 bp | ATGGCCCACGATGGCCACGTCGTCGATGCGCTGGTCCCGCAGCACTaGACTGATGTAGACCTTCCAGTCGCCCATCGCGCTCCGAGTGCG | + |
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Preference number: 5 (lower is better) Translates to: MAHDGHVVDALVPQH*TDVDLPVAHRAPSA Trigger: CGCACTCGGAGCGCGATGGGCGACTGGAAGGTCTACATCAGTGCAGTGCTGCGGGACCAGCGCATCGACGACGTGGCCATCGTGGGCCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS CAA 90 bp | GCGCGCGGCGCACGGCCCACGCACACGGCGCGCGCGTCCAGCCCCTaGGTGCGTGCGTCCAGCACGCCGTCACCCTCGGCCAGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ARGARPTHTARASSP*VRASSTPSPSASRW Trigger: CCACCTGCTGGCCGAGGGTGACGGCGTGCTGGACGCACGCACCAAGGGGCTGGACGCGCGCGCCGTGTGCGTGGGCCGTGCGCCGCGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS GCA 72 bp | GTGTGCCTGTCCGGCCCCGTGAGCACGCCCACCTCCTaGGGCGAGATGGCCGCCAGCAGGCCCCCGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: VCLSGPVSTPTS*GEMAASRPPGR Trigger: GCGGCCCGGGGGCCTGCTGGCGGCCATCTCGCCGCAGGAGGTGGGCGTGCTCACGGGGCCGGACAGGCACAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS CAA 72 bp | GCACGGCCCACGCACACGGCGCGCGCGTCCAGCCCCTaGGTGCGTGCGTCCAGCACGCCGTCACCCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: ARPTHTARASSP*VRASSTPSPSA Trigger: GGCCGAGGGTGACGGCGTGCTGGACGCACGCACCAAGGGGCTGGACGCGCGCGCCGTGTGCGTGGGCCGTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS GCA 72 bp | GGCCCACGCACACGGCGCGCGCGTCCAGCCCCTTGGTaGGTGCGTCCAGCACGCCGTCACCCTCGGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GPRTRRARPAPW*VRPARRHPRPA Trigger: TGCTGGCCGAGGGTGACGGCGTGCTGGACGCACGCACCAAGGGGCTGGACGCGCGCGCCGTGTGCGTGGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS CCA 72 bp | CACGGCCCACGCACACGGCGCGCGCGTCCAGCCCCTTaGTGCGTGCGTCCAGCACGCCGTCACCCTCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: HGPRTRRARPAP*CVRPARRHPRP Trigger: TGGCCGAGGGTGACGGCGTGCTGGACGCACGCACCAAGGGGCTGGACGCGCGCGCCGTGTGCGTGGGCCGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS TCA 72 bp | GGCCCGCCTGCAGGAAGGTGTGCCTGTCCGGCCCCGTaGGCACGCCCACCTCCTGCGGCGAGATGGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: GPPAGRCACPAP*ARPPPAARWPP Trigger: TGGCGGCCATCTCGCCGCAGGAGGTGGGCGTGCTCACGGGGCCGGACAGGCACACCTTCCTGCAGGCGGGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS CCA 72 bp | CCGGGCCGCGAAGCCCACACGCAGCTGTTGTCCGCATaGCCCACGATGGCCACGTCGTCGATGCGCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PGREAHTQLLSA*PTMATSSMRWS Trigger: GGACCAGCGCATCGACGACGTGGCCATCGTGGGCCATGCGGACAACAGCTGCGTGTGGGCTTCGCGGCCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS CCA 72 bp | GTTTATTTGGCCCGCGCTACCAGTGGGCGGCCTGGCTaGCCGGCTAGGCGCCCTGCATGCGCAGCCCGCGTA | + |
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Preference number: 6 (lower is better) Translates to: VYLARATSGRPG*PARRPACAARV Trigger: TACGCGGGCTGCGCATGCAGGGCGCCTAGCCGGCCAGCCAGGCCGCCCACTGGTAGCGCGGGCCAAATAAAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS CCA 72 bp | AAGCCCACACGCAGCTGTTGTCCGCATGGCCCACGATaGCCACGTCGTCGATGCGCTGGTCCCGCAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: KPTRSCCPHGPR*PRRRCAGPAAL Trigger: CAGTGCTGCGGGACCAGCGCATCGACGACGTGGCCATCGTGGGCCATGCGGACAACAGCTGCGTGTGGGCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS CAA 90 bp | GCGCCCTGCATGCGCAGCCCGCGTATGAGTTCGTGCACCGTCTTGTaGAGGATGCCCCCATGTACGCCGCGTCGGCCCATTAGCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: APCMRSPRMSSCTVL*RMPPCTPRRPISTR Trigger: CCTGGTGCTAATGGGCCGACGCGGCGTACATGGGGGCATCCTCAACAAGACGGTGCACGAACTCATACGCGGGCTGCGCATGCAGGGCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS TCA 72 bp | CCACGTCGTCGATGCGCTGGTCCCGCAGCACTGCACTaGTGTAGACCTTCCAGTCGCCCATCGCGCTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: PRRRCAGPAALH*CRPSSRPSRSE Trigger: CTCGGAGCGCGATGGGCGACTGGAAGGTCTACATCAGTGCAGTGCTGCGGGACCAGCGCATCGACGACGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS CAA 72 bp | TGCATGCGCAGCCCGCGTATGAGTTCGTGCACCGTCTaGTTGAGGATGCCCCCATGTACGCCGCGTCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: CMRSPRMSSCTV*LRMPPCTPRRP Trigger: GGGCCGACGCGGCGTACATGGGGGCATCCTCAACAAGACGGTGCACGAACTCATACGCGGGCTGCGCATGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS GCA 72 bp | GATGGCCACGTCGTCGATGCGCTGGTCCCGCAGCACTaGACTGATGTAGACCTTCCAGTCGCCCATCGCGCT | + |
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Preference number: 6 (lower is better) Translates to: DGHVVDALVPQH*TDVDLPVAHRA Trigger: AGCGCGATGGGCGACTGGAAGGTCTACATCAGTGCAGTGCTGCGGGACCAGCGCATCGACGACGTGGCCATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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| CDS CAA 72 bp | ATGCGCAGCCCGCGTATGAGTTCGTGCACCGTCTTGTaGAGGATGCCCCCATGTACGCCGCGTCGGCCCATT | + |
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Preference number: 6 (lower is better) Translates to: MRSPRMSSCTVL*RMPPCTPRRPI Trigger: AATGGGCCGACGCGGCGTACATGGGGGCATCCTCAACAAGACGGTGCACGAACTCATACGCGGGCTGCGCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358571.3 |
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