Pregenerated sensors for PFKP-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000273001

Ensembl transcript IDs: ENST00000607898.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTTCTATTCTCCAGCGCAGCTCCTGAGCCCAGCGGTGGGTGCAGGTaGTTAGAGCCTGGCTCTGCTCTTCTGCCGCCAGAAGGCGAAGGG	+
Preference number: 5 (lower is better) Translates to: LLFSSAAPEPSGGCR*LEPGSALLPPEGEG Trigger: CCCTTCGCCTTCTGGCGGCAGAAGAGCAGAGCCAGGCTCTAAGCACCTGCACCCACCGCTGGGCTCAGGAGCTGCGCTGGAGAATAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607898.1
CDS GCA 90 bp	TTAGCCCTTCTATTCTCCAGCGCAGCTCCTGAGCCCAGCGGTGGGTaGAGGTGCTTAGAGCCTGGCTCTGCTCTTCTGCCGCCAGAAGGC	+
Preference number: 5 (lower is better) Translates to: LALLFSSAAPEPSGG*RCLEPGSALLPPEG Trigger: GCCTTCTGGCGGCAGAAGAGCAGAGCCAGGCTCTAAGCACCTGCACCCACCGCTGGGCTCAGGAGCTGCGCTGGAGAATAGAAGGGCTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607898.1
CDS TCA 90 bp	CAGTGTGCCCCACCCTCTCCACATGTAATTTGCTCTAAAAAGGCATaGATGACTAAATTAGCCCTTCTATTCTCCAGCGCAGCTCCTGAG	+
Preference number: 5 (lower is better) Translates to: QCAPPSPHVICSKKA*MTKLALLFSSAAPE Trigger: CTCAGGAGCTGCGCTGGAGAATAGAAGGGCTAATTTAGTCATTCATGCCTTTTTAGAGCAAATTACATGTGGAGAGGGTGGGGCACACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607898.1
CDS TCA 90 bp	TTAATAGAAGAGTGCTCAGGCTCAGTGCATGAGAGCAGCGCTCTCTaGCTTTGCACTTATCAGAGTAACCTAGGGGGCTTGTTTAAAAAT	+
Preference number: 5 (lower is better) Translates to: LIEECSGSVHESSAL*LCTYQSNLGGLFKN Trigger: ATTTTTAAACAAGCCCCCTAGGTTACTCTGATAAGTGCAAAGTCAGAGAGCGCTGCTCTCATGCACTGAGCCTGAGCACTCTTCTATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000607898.1
CDS GCA 72 bp	GCCCAGCGGTGGGTGCAGGTGCTTAGAGCCTGGCTCTaGTCTTCTGCCGCCAGAAGGCGAAGGGCACCCAAC	+
Preference number: 6 (lower is better) Translates to: AQRWVQVLRAWL*SSAARRRRAPN Trigger: GTTGGGTGCCCTTCGCCTTCTGGCGGCAGAAGAGCAGAGCCAGGCTCTAAGCACCTGCACCCACCGCTGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607898.1
CDS GCA 72 bp	TCCAGCGCAGCTCCTGAGCCCAGCGGTGGGTGCAGGTaGTTAGAGCCTGGCTCTGCTCTTCTGCCGCCAGAA	+
Preference number: 6 (lower is better) Translates to: SSAAPEPSGGCR*LEPGSALLPPE Trigger: TTCTGGCGGCAGAAGAGCAGAGCCAGGCTCTAAGCACCTGCACCCACCGCTGGGCTCAGGAGCTGCGCTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607898.1
CDS GCA 72 bp	CTATTCTCCAGCGCAGCTCCTGAGCCCAGCGGTGGGTaGAGGTGCTTAGAGCCTGGCTCTGCTCTTCTGCCG	+
Preference number: 6 (lower is better) Translates to: LFSSAAPEPSGG*RCLEPGSALLP Trigger: CGGCAGAAGAGCAGAGCCAGGCTCTAAGCACCTGCACCCACCGCTGGGCTCAGGAGCTGCGCTGGAGAATAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607898.1
CDS CCA 72 bp	CATTCCCTGGCTGAGCTCCCAGAAATTGGACTTCAGTaGTTTAGCGGGAGTGTGCATAGGCCAGGTGATTCT	+
Preference number: 6 (lower is better) Translates to: HSLAELPEIGLQ*FSGSVHRPGDS Trigger: AGAATCACCTGGCCTATGCACACTCCCGCTAAACCACTGAAGTCCAATTTCTGGGAGCTCAGCCAGGGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607898.1
CDS TCA 72 bp	CCACCCTCTCCACATGTAATTTGCTCTAAAAAGGCATaGATGACTAAATTAGCCCTTCTATTCTCCAGCGCA	+
Preference number: 6 (lower is better) Translates to: PPSPHVICSKKA*MTKLALLFSSA Trigger: TGCGCTGGAGAATAGAAGGGCTAATTTAGTCATTCATGCCTTTTTAGAGCAAATTACATGTGGAGAGGGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607898.1

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