RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PFKP (Homo sapiens)

Ensembl gene IDs: ENSG00000067057

Ensembl transcript IDs: ENST00000381072.5, ENST00000381075.7, ENST00000381125.9, ENST00000407806.2, ENST00000413079.1, ENST00000415005.6, ENST00000421751.1, ENST00000433193.2, ENST00000460445.1, ENST00000607886.5, ENST00000676796.1, ENST00000677351.1, ENST00000678089.1, ENST00000678206.1

Found 837 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGCACAGCTaGGCGTACGGCTGCGTTCATCCCAGCCGCGGGTGCCCCCACGTT +
Preference number: 1 (lower is better)
Translates to: DGEHPVAVGNAHAHS*AYGCVHPSRGCPHV
Trigger: AACGTGGGGGCACCCGCGGCTGGGATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR TCA 90 bp AATGCATCGTGCACCGACGAGACACCCAAGGTGCCCAGGCTGGCCTaGCAAGCAGCTTCTGTCCCAGCCGTCTCCGCCCTGCCCTTGGCC +
Preference number: 1 (lower is better)
Translates to: NASCTDETPKVPRLA*QAASVPAVSALPLA
Trigger: GGCCAAGGGCAGGGCGGAGACGGCTGGGACAGAAGCTGCTTGTCAGGCCAGCCTGGGCACCTTGGGTGTCTCGTCGGTGCACGATGCATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR CCA 90 bp ACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTaGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCATG +
Preference number: 1 (lower is better)
Translates to: TSACADSGNSITPRP*GSVHQTGVHRGGCM
Trigger: CATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR CCA 90 bp CGTGTAATGCATCGTGCACCGACGAGACACCCAAGGTGCCCAGGCTaGCCTGACAAGCAGCTTCTGTCCCAGCCGTCTCCGCCCTGCCCT +
Preference number: 1 (lower is better)
Translates to: RVMHRAPTRHPRCPG*PDKQLLSQPSPPCP
Trigger: AGGGCAGGGCGGAGACGGCTGGGACAGAAGCTGCTTGTCAGGCCAGCCTGGGCACCTTGGGTGTCTCGTCGGTGCACGATGCATTACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR GCA 90 bp AGGCCCTGGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTaGATGGAAACCGTCCTGAGAAGCAAGTGGGTTGGGGTGAGTAAG +
Preference number: 1 (lower is better)
Translates to: RPWGSVHQTGVHRGG*METVLRSKWVGVSK
Trigger: CTTACTCACCCCAACCCACTTGCTTCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR GCA 90 bp CGTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCAATaGCCACGCGCACAGCTGAGCGTACGGCTGCGTTCATCCCAGCCG +
Preference number: 1 (lower is better)
Translates to: RQSHHRWRASCGRRQ*PRAQLSVRLRSSQP
Trigger: CGGCTGGGATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CCA 90 bp CCCACCAGGGCAGCAGGGCTGTCATCCCAGCAGCCGTGTCTACTCTaGCAGGAGTCTTCCGGAGAGTTCCAACCTAGGTCCCAGCGAGGA +
Preference number: 1 (lower is better)
Translates to: PTRAAGLSSQQPCLL*QESSGEFQPRSQRG
Trigger: TCCTCGCTGGGACCTAGGTTGGAACTCTCCGGAAGACTCCTGCCAGAGTAGACACGGCTGCTGGGATGACAGCCCTGCTGCCCTGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR CCA 90 bp CTCCGAGAGTTTGACACACATCTGCTCCTCCCAGCCTTCCTCTGGTaGAGATTCTGGAAGGAACACCCAGTCCGCACCGCAGGCCAAGGC +
Preference number: 1 (lower is better)
Translates to: LREFDTHLLLPAFLW*RFWKEHPVRTAGQG
Trigger: GCCTTGGCCTGCGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGGGAGGAGCAGATGTGTGTCAAACTCTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CCA 90 bp AAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTaGGTCAGACACTCCAGGGCTGCACATGTTCCAGCTGGCCTGAGT +
Preference number: 1 (lower is better)
Translates to: KNRQSTVAAGTCRRD*VRHSRAAHVPAGLS
Trigger: ACTCAGGCCAGCTGGAACATGTGCAGCCCTGGAGTGTCTGACCCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CCA 90 bp TTTGACACACATCTGCTCCTCCCAGCCTTCCTCTGGTGGAGATTCTaGAAGGAACACCCAGTCCGCACCGCAGGCCAAGGCACTCACCAG +
Preference number: 1 (lower is better)
Translates to: FDTHLLLPAFLWWRF*KEHPVRTAGQGTHQ
Trigger: CTGGTGAGTGCCTTGGCCTGCGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGGGAGGAGCAGATGTGTGTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CCA 90 bp GGAGTTCACCGCGGCGGCTGCATGGAAACCGTCCTGAGAAGCAAGTaGGTTGGGGTGAGTAAGCGCTTGCTTCATCGTTACAGAGCCAGA +
Preference number: 1 (lower is better)
Translates to: GVHRGGCMETVLRSK*VGVSKRLLHRYRAR
Trigger: TCTGGCTCTGTAACGATGAAGCAAGCGCTTACTCACCCCAACCCACTTGCTTCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR CCA 90 bp GTTCTCCGAGAGTTTGACACACATCTGCTCCTCCCAGCCTTCCTCTaGTGGAGATTCTGGAAGGAACACCCAGTCCGCACCGCAGGCCAA +
Preference number: 1 (lower is better)
Translates to: VLREFDTHLLLPAFL*WRFWKEHPVRTAGQ
Trigger: TTGGCCTGCGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGGGAGGAGCAGATGTGTGTCAAACTCTCGGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR TCA 90 bp AGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTTGGCTGTCGGACTCTaGTTTCCCAAACAGAGTTTGTTTTTGGCCTCTCCTCTCCCTCCA +
Preference number: 1 (lower is better)
Translates to: RKESLRASSFLAVGL*FPKQSLFLASPLPP
Trigger: TGGAGGGAGAGGAGAGGCCAAAAACAAACTCTGTTTGGGAAATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGCGGAGGCTTTCCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR TCA 90 bp ACCCAGCACGTTCTTCCTGCAGTCAAACACGCCTTTGCCCTCTTCTaGATACAGCTGGTAAATGAAGTCGGTGGTGTAGTTTTCACTGCA +
Preference number: 1 (lower is better)
Translates to: TQHVLPAVKHAFALF*IQLVNEVGGVVFTA
Trigger: TGCAGTGAAAACTACACCACCGACTTCATTTACCAGCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACTGCAGGAAGAACGTGCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CCA 90 bp ATCGTTACAGAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTTaGCTGTCGGACTCTGATTTCCCAAACAGAGTTTGTTTTTGGCCT +
Preference number: 1 (lower is better)
Translates to: IVTEPERKASALALS*LSDSDFPNRVCFWP
Trigger: AGGCCAAAAACAAACTCTGTTTGGGAAATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTCTGTAACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR CCA 90 bp GGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGACGCACTGGAGCAGGTaGGGCAGATGGGCACTCGCC +
Preference number: 2 (lower is better)
Translates to: GVSGVASSKAMTASTPMRTHWSR*GRWALA
Trigger: GGCGAGTGCCCATCTGCCCCACCTGCTCCAGTGCGT...CCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp TGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTCCGCGTGCGGAAGGCCTaGCACCGCGCACTGCCAATG +
Preference number: 2 (lower is better)
Translates to: WGHRTPRASPGRLTAPGVRVRKA*HRALPM
Trigger: CATTGGCAGTGCGCGGTGCCAGGCCTTCCGCACGCG...GACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR CCA 90 bp TCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCACAGACAGTCCACGGTaGCTGCAGGCACATGCAGGC +
Preference number: 2 (lower is better)
Translates to: SGVASSKAMTASTPMRLATDSPR*LQAHAG
Trigger: GCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGT...GGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp GGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGGCACGTGCCCGAGGATaGTCACACGTGTGTCATAGC +
Preference number: 2 (lower is better)
Translates to: GVSGVASSKAMTASTPMRARARG*SHVCHS
Trigger: GCTATGACACACGTGTGACCATCCTCGGGCACGTGC...CCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR TCA 90 bp ATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTTCTGGGCCGTGGTCATaGTGGCGTCGACGACCTCGA +
Preference number: 2 (lower is better)
Translates to: MGTQNSSCFSRAADSSRSSGPWS*WRRRPR
Trigger: TCGAGGTCGTCGACGCCATCATGACCACGGCCCAGA...ACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR TCA 90 bp ATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTACAAGGGAAGCGGTGTaGCCAGCAGCCAGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: MGTQNSSCFSRAADSSRSTREAV*PAARLL
Trigger: GAGAAGCCTGGCTGCTGGTCACACCGCTTCCCTTGT...ACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR CCA 90 bp GGCCGTCGGCAATGCCCACGCGCACAGCTGAGCGTACGGCTGCGTTCATCCCAGCTCCCAGCCTTCCTCTaGTGGAGATTCTGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: GRRQCPRAQLSVRLRSSQLPAFL*WRFWKE
Trigger: TTCCTTCCAGAATCTCCACCAGAGGAAGGCTGGGAG...CTGGGATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGCATTGCCGACGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp GCCGCGGGTGCCCCCACGTTGATGACAGCTACGTTGCAATTGGTCTTTGGGATCGGCAGGCGCACGGCGTaGTTCCCGTTCAGTGACACG +
Preference number: 2 (lower is better)
Translates to: AAGAPTLMTATLQLVFGIGRRTA*FPFSDT
Trigger: CGTGTCACTGAACGGGAACCACGCCGTGCGCCTGCC...GATCCCAAAGACCAATTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR TCA 90 bp AGTAGCGGGAACCATGACCATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGTGGTTCCCGTTCAGTaGCACGACGCAAGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: SSGNHDHGDTELLVLLPGVVPVQ*HDASWG
Trigger: ACCCCAGCTTGCGTCGTGTCACTGAACGGGAACCAC...GCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCATGGTCATGGTTCCCGCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR TCA 90 bp CATAGATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGCACAGCTGAGCGATCATCCGGCAGCTTaGTGGCAAGTCGCTTGTAGG +
Preference number: 2 (lower is better)
Translates to: HRWRASCGRRQCPRAQLSDHPAA*WQVACR
Trigger: CCTACAAGCGACTTGCCATCAAGCTGCCGGATGATC...GCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR TCA 90 bp CATGTTCCAGCTGGCCTGAGTCCGACACGTCATAGCTGGCCTTGTACTTGGCCAGCCCACGCGCACAGCTaGGCGTACGGCTGCGTTCAT +
Preference number: 2 (lower is better)
Translates to: HVPAGLSPTRHSWPCTWPAHAHS*AYGCVH
Trigger: ATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGC...TGGCCAAGTACAAGGCCAGCTATGACGTGTCGGACTCAGGCCAGCTGGAACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR GCA 90 bp ATCAGCAGCGCGTTGATGCTGTGCGTGCGCATCTGTGTGGCGATCTCTTCCAAGGGGGTCCCTCCTCTCTaGACGTGCCCGAGGATGGTC +
Preference number: 2 (lower is better)
Translates to: ISSALMLCVRICVAISSKGVPPL*TCPRMV
Trigger: GACCATCCTCGGGCACGTGCAGAGAGGAGGGACCCC...CTTGGAAGAGATCGCCACACAGATGCGCACGCACAGCATCAACGCGCTGCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR GCA 90 bp AGTAGCGGGAACCATGACCATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCTGCCCACTCACCATCTaGACGCACTCCATCAGCGGC +
Preference number: 2 (lower is better)
Translates to: SSGNHDHGDTELLVLLPGCPLTI*THSISG
Trigger: GCCGCTGATGGAGTGCGTGCAGATGGTGAGTGGGCA...GCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCATGGTCATGGTTCCCGCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR-3UTR CCA 90 bp ATCAGCAGCGCGTTGATGCTGTGCGTGCGCATCTGTGTGGCGATCTCTTCCAAGTCTCCGCCCTGCCCTTaGCCATGGGCTGCCCACTCA +
Preference number: 2 (lower is better)
Translates to: ISSALMLCVRICVAISSKSPPCP*PWAAHS
Trigger: TGAGTGGGCAGCCCATGGCCAAGGGCAGGGCGGAGA...CTTGGAAGAGATCGCCACACAGATGCGCACGCACAGCATCAACGCGCTGCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR-3UTR CCA 90 bp GTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGCCAAGGTGCCCAGGCTaGCCTGACAAGCAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: VKAIIDGEHPVAVGNAHAPRCPG*PDKQLL
Trigger: CAGAAGCTGCTTGTCAGGCCAGCCTGGGCACCTTGG...CGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR-3UTR GCA 90 bp GTCAGGTGCTCCACGTTGGACTGCAGATCCCTGATGTCGAAGGGCTCTTCGAAACGCGCTGCAGCAGGTTaGAAGCAGCCTTCAGGCGGC +
Preference number: 2 (lower is better)
Translates to: VRCSTLDCRSLMSKGSSKRAAAG*KQPSGG
Trigger: GCCGCCTGAAGGCTGCTTGCAACCTGCTGCAGCGCG...TTTCGAAGAGCCCTTCGACATCAGGGATCTGCAGTCCAACGTGGAGCACCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR GCA 90 bp CTGCTTGATGCGGTCGCAGGTGTCGGTGATAGTGTTCAGGGCGGTGTCTGCCCCTGTAGGTGTTCAGGTTaGCCGCAAAGCTCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: LLDAVAGVGDSVQGGVCPCRCSG*PQSSSL
Trigger: GAGGGAGGAGCTTTGCGGGCAACCTGAACACCTACA...GGGGCAGACACCGCCCTGAACACTATCACCGACACCTGCGACCGCATCAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp TCCACCCAGCTCTCTGCCCCCATTTCTGAGGCGCAGCTGTTCTCTCTTGCAGACACAGACAGTCCACGGTaGCTGCAGGCACATGCAGGC +
Preference number: 2 (lower is better)
Translates to: STQLSAPISEAQLFSLADTDSPR*LQAHAG
Trigger: GCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGT...GTCTGCAAGAGAGAACAGCTGCGCCTCAGAAATGGGGGCAGAGAGCTGGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR CCA 90 bp AGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTACGCACTGGAGCAGGTaGGGCAGATGGGCACTCGCC +
Preference number: 2 (lower is better)
Translates to: SFYQMERVPHPAACDPARTHWSR*GRWALA
Trigger: GGCGAGTGCCCATCTGCCCCACCTGCTCCAGTGCGT...ACGTGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp GCGGGAACCATGACCATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTCAAAGCCATCATAGATaGCGAGCATCCTGTGGCCGT +
Preference number: 2 (lower is better)
Translates to: AGTMTMGTQNSSCFSRAAQSHHR*RASCGR
Trigger: ACGGCCACAGGATGCTCGCCATCTATGATGGCTTTG...AGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCATGGTCATGGTTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CAA 90 bp AGGGCGGTGTCTGCCCCGATGCTGAAATCGGAACCCGGCACATTGTaGGACACAGTAGCGGGAACCATGACCATGGGGACACAGAACTCC +
Preference number: 2 (lower is better)
Translates to: RAVSAPMLKSEPGTL*DTVAGTMTMGTQNS
Trigger: GGAGTTCTGTGTCCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTCCGATTTCAGCATCGGGGCAGACACCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR TCA 90 bp GGGTGCCCCCACGTTGATGACAGCTACGTTGCAATTGGTCTTTGGGATCTGATCACCGCGCACTGCCAATaGTCGTCCCGCCCACCAGAG +
Preference number: 2 (lower is better)
Translates to: GCPHVDDSYVAIGLWDLITAHCQ*SSRPPE
Trigger: CTCTGGTGGGCGGGACGATCATTGGCAGTGCGCGGT...GATCAGATCCCAAAGACCAATTGCAACGTAGCTGTCATCAACGTGGGGGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR TCA 90 bp AGTACTTCCCCGGGAGAACGCGTTTTGTCCCAAGAATGGAGCCTCCTTGGCCGGCCATGCCCACCACGTTaGGGTAGGCGTACTTCTGCA +
Preference number: 2 (lower is better)
Translates to: STSPGERVLSQEWSLLGRPCPPR*GRRTSA
Trigger: TGCAGAAGTACGCCTACCTCAACGTGGTGGGCATGG...CCGGCCAAGGAGGCTCCATTCTTGGGACAAAACGCGTTCTCCCGGGGAAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR TCA 90 bp CATGTTCCAGCTGGCCTGAGTCCGACACGTCATAGCTGGCCTTGTACTTGGCCACCTCTAGCAAGGCGATaGCTGCCTCCACTCCCATGC +
Preference number: 2 (lower is better)
Translates to: HVPAGLSPTRHSWPCTWPPLARR*LPPLPC
Trigger: GCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGG...TGGCCAAGTACAAGGCCAGCTATGACGTGTCGGACTCAGGCCAGCTGGAACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR GCA 90 bp CATGTTCCAGCTGGCCTGAGTCCGACACGTCATAGCTGGCCTTGTACTTGGCCACCTCCTCTCTGCACGTaGCCGAGGATGGTCACACGT +
Preference number: 2 (lower is better)
Translates to: HVPAGLSPTRHSWPCTWPPPLCT*PRMVTR
Trigger: ACGTGTGACCATCCTCGGGCACGTGCAGAGAGGAGG...TGGCCAAGTACAAGGCCAGCTATGACGTGTCGGACTCAGGCCAGCTGGAACATG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR GCA 90 bp AGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTGTTCCGCTGGCGGACTaGTTGATGCGGTCGCAGGTG +
Preference number: 2 (lower is better)
Translates to: SFYQMERVPHPAACDPARVPLAD*LMRSQV
Trigger: CACCTGCGACCGCATCAAGCAGTCCGCCAGCGGAAC...ACGTGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp GGGTGCCCCCACGTTGATGACAGCTACGTTGCAATTGGTCTTTGGGATCTGATCCGATCTGGCCGTTCCTaGCCAGCTCCTCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: GCPHVDDSYVAIGLWDLIRSGRS*PAPPAA
Trigger: GGCTGCTGGAGGAGCTGGCCAGGAACGGCCAGATCG...GATCAGATCCCAAAGACCAATTGCAACGTAGCTGTCATCAACGTGGGGGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR CCA 90 bp ATCAGCAGCGCGTTGATGCTGTGCGTGCGCATCTGTGTGGCGATCTCTTCCAAGACGAAGGTCCTCTGGTaGCTCTGGGCCGTGGTCATG +
Preference number: 2 (lower is better)
Translates to: ISSALMLCVRICVAISSKTKVLW*LWAVVM
Trigger: CATGACCACGGCCCAGAGCCACCAGAGGACCTTCGT...CTTGGAAGAGATCGCCACACAGATGCGCACGCACAGCATCAACGCGCTGCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR CAA 90 bp TTCAGGGCGGTGTCTGCCCCGATGCTGAAATCGGAACCCGGCACATaGTTGGACACAGTAGCGGGAACCATGACCATGGGGACACAGAAC +
Preference number: 2 (lower is better)
Translates to: FRAVSAPMLKSEPGT*LDTVAGTMTMGTQN
Trigger: GTTCTGTGTCCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTCCGATTTCAGCATCGGGGCAGACACCGCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR TCA 90 bp TCCACCCAGCTCTCTGCCCCCATTTCTGAGGCGCAGCTGTTCTCTCTTGCAGACTGGCTATCAGATTTTTaGACCCACCTCCGCCCCACC +
Preference number: 2 (lower is better)
Translates to: STQLSAPISEAQLFSLADWLSDF*THLRPT
Trigger: GGTGGGGCGGAGGTGGGTTCAAAAATCTGATAGCCA...GTCTGCAAGAGAGAACAGCTGCGCCTCAGAAATGGGGGCAGAGAGCTGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR TCA 90 bp ATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTAGTCGAACCGCATCTTaGAATCTCCTCTCGTCCATC +
Preference number: 2 (lower is better)
Translates to: MGTQNSSCFSRAADSSRSSRTAS*NLLSSI
Trigger: GATGGACGAGAGGAGATTTCAAGATGCGGTTCGACT...ACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR GCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTACAGTCCACGGTGGCTaGAGGCACATGCAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: CTSESMRHTPQTARTGAGTVHGG*RHMQAG
Trigger: TCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGT...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR GCA 90 bp TTTGATCTGGCCCTTGGCGAAGCCGTCAAAGCCATCATAGATGGCGAGCATCCTACAGTCCACGGTGGCTaGAGGCACATGCAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: FDLALGEAVKAIIDGEHPTVHGG*RHMQAG
Trigger: TCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGT...AGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR GCA 90 bp AGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTACGAGACACCCAAGGTaGCCAGGCTGGCCTGACAAG +
Preference number: 2 (lower is better)
Translates to: SFYQMERVPHPAACDPARTRHPR*PGWPDK
Trigger: CTTGTCAGGCCAGCCTGGGCACCTTGGGTGTCTCGT...ACGTGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR-3UTR CCA 90 bp GAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTTGGCTGTCGGACTCTGATACAGACAGCACGCACTaGAGCAGGTGGGGCAGATGG +
Preference number: 2 (lower is better)
Translates to: EPERKASALALSWLSDSDTDSTH*SRWGRW
Trigger: CCATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGT...ATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR CCA 90 bp TCCCTGATGTCGAAGGGCTCTTCGAAAATGTATGCGGCATCAGCTCCGGCCGCGGTTTTGTCCCAAGAATaGAGCCTCCTTGGCCGGTCC +
Preference number: 2 (lower is better)
Translates to: SLMSKGSSKMYAASAPAAVLSQE*SLLGRS
Trigger: GGACCGGCCAAGGAGGCTCCATTCTTGGGACAAAAC...CGCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAGCCCTTCGACATCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CAA 90 bp GTTCAGGTTGCCCGCAAAGCTCCTCCCTCGGAGTCGAACCGCATCTaGAAATCTCCTCTCGTCCATCGCCTTCTGCACATCCTGAGTCTC +
Preference number: 2 (lower is better)
Translates to: VQVARKAPPSESNRI*KSPLVHRLLHILSL
Trigger: GAGACTCAGGATGTGCAGAAGGCGATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTCCGAGGGAGGAGCTTTGCGGGCAACCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR-3UTR TCA 90 bp TCCTCCCAGCCTTCCTCTGGTGGAGATTCTGGAAGGAACACCCAGTCCGCACCGGCACATCTGAAAGCATaGGACACACTCCACAGACAG +
Preference number: 2 (lower is better)
Translates to: SSQPSSGGDSGRNTQSAPAHLKA*DTLHRQ
Trigger: CTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGC...CGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR TCA 90 bp ATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTGCTCATATGCACATCTaGAAGCATGAGACACACTCC +
Preference number: 2 (lower is better)
Translates to: MGTQNSSCFSRAADSSRSAHMHI*KHETHS
Trigger: GGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGC...ACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR TCA 90 bp AGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCATGGAAACCGTCCTGAGAGCTGTGGATGGAAACTaGCACATGGCAGATATGGAA +
Preference number: 2 (lower is better)
Translates to: SVHQTGVHRGGCMETVLRAVDGN*HMADME
Trigger: TTCCATATCTGCCATGTGTCAGTTTCCATCCACAGC...TCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR TCA 90 bp AGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCATGGAAACCGTCCTGAGATTGGCTGTCGGACTCTaGTTTCCCAAACAGAGTTTG +
Preference number: 2 (lower is better)
Translates to: SVHQTGVHRGGCMETVLRLAVGL*FPKQSL
Trigger: CAAACTCTGTTTGGGAAATCAGAGTCCGACAGCCAA...TCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR GCA 90 bp AGTAGCGGGAACCATGACCATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCAGTTTGACACACATCTaGTCCTCCCAGCCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: SSGNHDHGDTELLVLLPGSLTHI*SSQPSS
Trigger: AGAGGAAGGCTGGGAGGAGCAGATGTGTGTCAAACT...GCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCATGGTCATGGTTCCCGCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp AGTACTTCCCCGGGAGAACGCGTTTTGTCCCAAGAATGGAGCCTCCTTGGCCGGCCAGCCTTCCTCTGGTaGAGATTCTGGAAGGAACAC +
Preference number: 2 (lower is better)
Translates to: STSPGERVLSQEWSLLGRPAFLW*RFWKEH
Trigger: GTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGG...CCGGCCAAGGAGGCTCCATTCTTGGGACAAAACGCGTTCTCCCGGGGAAGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp AGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTGCACGTGCCCGAGGATaGTCACACGTGTGTCATAGC +
Preference number: 2 (lower is better)
Translates to: SFYQMERVPHPAACDPARARARG*SHVCHS
Trigger: GCTATGACACACGTGTGACCATCCTCGGGCACGTGC...ACGTGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CAA 90 bp GTTCAGGTTGCCCGCAAAGCTCCTCCCTCGGAGTCGAACCGCATCTaGAAATCTCCTCTCGTCCATCGCCTTCTGCACATCCTGAGTCAT +
Preference number: 2 (lower is better)
Translates to: VQVARKAPPSESNRI*KSPLVHRLLHILSH
Trigger: ATGACTCAGGATGTGCAGAAGGCGATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTCCGAGGGAGGAGCTTTGCGGGCAACCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR GCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAACAGTCCACGGTGGCTaGAGGCACATGCAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: ICTSESMRHTPQTARTGATVHGG*RHMQAG
Trigger: TCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGT...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR GCA 90 bp GAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCCCCTTGGCCATGGGCTaGCCACTCACCATCTGCACG +
Preference number: 2 (lower is better)
Translates to: EILVPKFLSNGEGAPPCCPLAMG*PLTICT
Trigger: CGTGCAGATGGTGAGTGGGCAGCCCATGGCCAAGGG...GCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR-3UTR CCA 90 bp AGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTCTCTGGTGGAGATTCTaGAAGGAACACCCAGTCCGC +
Preference number: 2 (lower is better)
Translates to: SFYQMERVPHPAACDPARLWWRF*KEHPVR
Trigger: GCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAG...ACGTGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp GGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGGTGATGGGTTTATTTTaGGTATCAATTGCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: GVSGVASSKAMTASTPMRVMGLF*VSIAPS
Trigger: TGAAGGAGCAATTGATACCCAAAATAAACCCATCAC...CCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp GAACCCGGCACATTGTTGGACACAGTAGCGGGAACCATGACCATGGGGACACAGCAAAGCCATCATAGATaGCGAGCATCCTGTGGCCGT +
Preference number: 2 (lower is better)
Translates to: EPGTLLDTVAGTMTMGTQQSHHR*RASCGR
Trigger: ACGGCCACAGGATGCTCGCCATCTATGATGGCTTTG...CTGTGTCCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CAA 90 bp ATGGAAACCGTCCTGAGAAGCAAGTGGGTTGGGGTGAGTAAGCGCTaGCTTCATCGTTACAGAGCCAGAAAGGAAAGCCTCCGCGCTAGC +
Preference number: 2 (lower is better)
Translates to: METVLRSKWVGVSKR*LHRYRARKESLRAS
Trigger: GCTAGCGCGGAGGCTTTCCTTTCTGGCTCTGTAACGATGAAGCAAGCGCTTACTCACCCCAACCCACTTGCTTCTCAGGACGGTTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR TCA 90 bp AGCAGCCGTGTCTACTCTGGCAGGAGTCTTCCGGAGAGTTCCAACCTAGGTCCCGCTCATATGCACATCTaGAAGCATGAGACACACTCC +
Preference number: 2 (lower is better)
Translates to: SSRVYSGRSLPESSNLGPAHMHI*KHETHS
Trigger: GGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGC...GGGACCTAGGTTGGAACTCTCCGGAAGACTCCTGCCAGAGTAGACACGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR GCA 90 bp TGGGTTGGGGTGAGTAAGCGCTTGCTTCATCGTTACAGAGCCAGAAAGGAAAGCAGGGTCCCGGCCTGCTaGTGTGGATGGAAACTGACA +
Preference number: 2 (lower is better)
Translates to: WVGVSKRLLHRYRARKESRVPAC*CGWKLT
Trigger: TGTCAGTTTCCATCCACAGCAGCAGGCCGGGACCCT...GCTTTCCTTTCTGGCTCTGTAACGATGAAGCAAGCGCTTACTCACCCCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR GCA 90 bp CTTGAGCCACCACTGTTCTTTGGGAATCCTGTGCTCAAAATCCGTTTGCTTCTTTGTGGCCGTCGGCAATaGCCACGCGCACAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: LEPPLFFGNPVLKIRLLLCGRRQ*PRAQLS
Trigger: GCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACA...AAGAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAACAGACAGTCCACGGTaGCTGCAGGCACATGCAGGC +
Preference number: 2 (lower is better)
Translates to: ICTSESMRHTPQTARTGATDSPR*LQAHAG
Trigger: GCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGT...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp ACGTGTGTCATAGCCCAGCTGCGTGACGACAAGCTCTTTGATTTTCTCAGAGGTACAGACAGCACGCACTaGAGCAGGTGGGGCAGATGG +
Preference number: 2 (lower is better)
Translates to: TCVIAQLRDDKLFDFLRGTDSTH*SRWGRW
Trigger: CCATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGT...ACCTCTGAGAAAATCAAAGAGCTTGTCGTCACGCAGCTGGGCTATGACACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp AGCTACGTTGCAATTGGTCTTTGGGATCTGATCATCCGGCAGCTTGATGGCAAGACAGACAGCACGCACTaGAGCAGGTGGGGCAGATGG +
Preference number: 2 (lower is better)
Translates to: SYVAIGLWDLIIRQLDGKTDSTH*SRWGRW
Trigger: CCATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGT...CTTGCCATCAAGCTGCCGGATGATCAGATCCCAAAGACCAATTGCAACGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp TGGCAGAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTACAGACAGTCCACGGTaGCTGCAGGCACATGCAGGC +
Preference number: 2 (lower is better)
Translates to: WQRFWFQSFYQMERVPHPTDSPR*LQAHAG
Trigger: GCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGT...AGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp GGTTCCCGTTCAGTGACACGACGCAAGCTGGGGTGTCCGGGGTGGCCTCTAGCAGTGATGGGTTTATTTTaGGTATCAATTGCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: GSRSVTRRKLGCPGWPLAVMGLF*VSIAPS
Trigger: TGAAGGAGCAATTGATACCCAAAATAAACCCATCAC...TGCTAGAGGCCACCCCGGACACCCCAGCTTGCGTCGTGTCACTGAACGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp TCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCCGATTTCTTTGATCTaGCCCTTGGCGAAGCCGTCA +
Preference number: 2 (lower is better)
Translates to: SKVSIKWRGCPTLLHVTQPISLI*PLAKPS
Trigger: TGACGGCTTCGCCAAGGGCCAGATCAAAGAAATCGG...CTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR TCA 90 bp AGCAGCCGTGTCTACTCTGGCAGGAGTCTTCCGGAGAGTTCCAACCTAGGTCCCTTTGTTCTCCTTGTATaGCGTGTGCATAGTTCAGTG +
Preference number: 2 (lower is better)
Translates to: SSRVYSGRSLPESSNLGPFVLLV*RVHSSV
Trigger: CACTGAACTATGCACACGTCATACAAGGAGAACAAA...GGGACCTAGGTTGGAACTCTCCGGAAGACTCCTGCCAGAGTAGACACGGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR GCA 90 bp CTTGAGCCACCACTGTTCTTTGGGAATCCTGTGCTCAAAATCCGTTTGCTTCTTCCTCCTCTCTGCACGTaGCCGAGGATGGTCACACGT +
Preference number: 2 (lower is better)
Translates to: LEPPLFFGNPVLKIRLLLPPLCT*PRMVTR
Trigger: ACGTGTGACCATCCTCGGGCACGTGCAGAGAGGAGG...AAGAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp CTTGAGCCACCACTGTTCTTTGGGAATCCTGTGCTCAAAATCCGTTTGCTTCTTAGAACGAAGGTCCTCTaGTGGCTCTGGGCCGTGGTC +
Preference number: 2 (lower is better)
Translates to: LEPPLFFGNPVLKIRLLLRTKVL*WLWAVV
Trigger: GACCACGGCCCAGAGCCACCAGAGGACCTTCGTTCT...AAGAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR GCA 90 bp TGCTTGATGCGGTCGCAGGTGTCGGTGATAGTGTTCAGGGCGGTGTCTGCCCCGTTAATTCTGCTCATATaGACATCTGAAAGCATGAGA +
Preference number: 2 (lower is better)
Translates to: CLMRSQVSVIVFRAVSAPLILLI*TSESMR
Trigger: TCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA...CGGGGCAGACACCGCCCTGAACACTATCACCGACACCTGCGACCGCATCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp GAACCCGGCACATTGTTGGACACAGTAGCGGGAACCATGACCATGGGGACACAGCAGCTACGTTGCAATTaGTCTTTGGGATCTGATCAT +
Preference number: 2 (lower is better)
Translates to: EPGTLLDTVAGTMTMGTQQLRCN*SLGSDH
Trigger: ATGATCAGATCCCAAAGACCAATTGCAACGTAGCTG...CTGTGTCCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR TCA 90 bp TTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCTCATATGCACATCTaGAAGCATGAGACACACTCC +
Preference number: 2 (lower is better)
Translates to: FQSFYQMERVPHPAACDPAHMHI*KHETHS
Trigger: GGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGC...TGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR GCA 90 bp CTTGGCGAAGCCGTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCTTAATTCTGCTCATATaGACATCTGAAAGCATGAGA +
Preference number: 2 (lower is better)
Translates to: LGEAVKAIIDGEHPVAVGLILLI*TSESMR
Trigger: TCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA...GCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR GCA 90 bp AGTTTTGCAGTGATCCACTCCATAGCTCTGGCAGAGATTTTGGTTCCAAAGTTTCTGCCTCCACTCCCATaGGGCTGGCCAAGATCCTGT +
Preference number: 2 (lower is better)
Translates to: SFAVIHSIALAEILVPKFLPPLP*GWPRSC
Trigger: ACAGGATCTTGGCCAGCCGCATGGGAGTGGAGGCAG...AAACTTTGGAACCAAAATCTCTGCCAGAGCTATGGAGTGGATCACTGCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCACAGACAGTCCACGGTaGCTGCAGGCACATGCAGGC +
Preference number: 2 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCTDSPR*LQAHAG
Trigger: GCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGT...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CCA 90 bp GAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTTGGCTGTCGGACTCTGATATGGAAACTGACACATaGCAGATATGGAATGGTGAG +
Preference number: 2 (lower is better)
Translates to: EPERKASALALSWLSDSDMETDT*QIWNGE
Trigger: CTCACCATTCCATATCTGCCATGTGTCAGTTTCCAT...ATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR CCA 90 bp GAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCAGAAATCATTGTCGATaGAGCCCACCATGCCCACCA +
Preference number: 2 (lower is better)
Translates to: EILVPKFLSNGEGAPPCCRNHCR*SPPCPP
Trigger: TGGTGGGCATGGTGGGCTCCATCGACAATGATTTCT...GCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR GCA 90 bp TCCCTGATGTCGAAGGGCTCTTCGAAAATGTATGCGGCATCAGCTCCGGCCGCGATTTTGGGTATCAATTaGTCCTTCAGCCACAATAAT +
Preference number: 2 (lower is better)
Translates to: SLMSKGSSKMYAASAPAAILGIN*SFSHNN
Trigger: ATTATTGTGGCTGAAGGAGCAATTGATACCCAAAAT...CGCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAGCCCTTCGACATCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR TCA 72 bp CCCGCGTGCGGAAGGCCTGGCACCGCGCACTGCCAATaGTCGTCCCGCCCACCAGAGCATGCCGGCCAGGAC +
Preference number: 3 (lower is better)
Translates to: PACGRPGTAHCQ*SSRPPEHAGQD
Trigger: GTCCTGGCCGGCATGCTCTGGTGGGCGGGACGATCATTGGCAGTGCGCGGTGCCAGGCCTTCCGCACGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR CAA 90 bp GGCCGTCGGCAATGCCCACGCGCACAGCTGAGCGTACGGCTGCGTTCATCCCAGGTCTCCGCCCTGCCCTaGGCCATGGGCTGCCCACTC +
Preference number: 3 (lower is better)
Translates to: GRRQCPRAQLSVRLRSSQVSALP*AMGCPL
Trigger: GAGTGGGCAGCCCATGGCCAAGGGCAGGGCGGAGAC...CTGGGATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGCATTGCCGACGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR TCA 72 bp CATCCTGTGGCCGTCGGCAATGCCCACGCGCACAGCTaGGCGTACGGCTGCGTTCATCCCAGCCGCGGGTGC +
Preference number: 3 (lower is better)
Translates to: HPVAVGNAHAHS*AYGCVHPSRGC
Trigger: GCACCCGCGGCTGGGATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACAGGATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR TCA 72 bp TGCACCGACGAGACACCCAAGGTGCCCAGGCTGGCCTaGCAAGCAGCTTCTGTCCCAGCCGTCTCCGCCCTG +
Preference number: 3 (lower is better)
Translates to: CTDETPKVPRLA*QAASVPAVSAL
Trigger: CAGGGCGGAGACGGCTGGGACAGAAGCTGCTTGTCAGGCCAGCCTGGGCACCTTGGGTGTCTCGTCGGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR GCA 72 bp CTCCACTCCCATGCGGCTGGCCAAGATCCTGTCGAATaGCGAAGGGGTCCCTCCTCTCTGCACGTGCCCGAG +
Preference number: 3 (lower is better)
Translates to: LHSHAAGQDPVE*RRGPSSLHVPE
Trigger: CTCGGGCACGTGCAGAGAGGAGGGACCCCTTCGGCATTCGACAGGATCTTGGCCAGCCGCATGGGAGTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR GCA 72 bp CCTGACAAGCAGCTTCTGTCCCAGCCGTCTCCGCCCTaGCCTTGGCCATGGGCTGCCCACTCACCATCTGCA +
Preference number: 3 (lower is better)
Translates to: PDKQLLSQPSPP*PWPWAAHSPSA
Trigger: TGCAGATGGTGAGTGGGCAGCCCATGGCCAAGGGCAGGGCGGAGACGGCTGGGACAGAAGCTGCTTGTCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR CCA 72 bp CATCGTGCACCGACGAGACACCCAAGGTGCCCAGGCTaGCCTGACAAGCAGCTTCTGTCCCAGCCGTCTCCG +
Preference number: 3 (lower is better)
Translates to: HRAPTRHPRCPG*PDKQLLSQPSP
Trigger: CGGAGACGGCTGGGACAGAAGCTGCTTGTCAGGCCAGCCTGGGCACCTTGGGTGTCTCGTCGGTGCACGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR GCA 72 bp GGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTaGATGGAAACCGTCCTGAGAAGCAAGTGGGTTGGG +
Preference number: 3 (lower is better)
Translates to: GSVHQTGVHRGG*METVLRSKWVG
Trigger: CCCAACCCACTTGCTTCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR CCA 72 bp TGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTaGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGC +
Preference number: 3 (lower is better)
Translates to: CADSGNSITPRP*GSVHQTGVHRG
Trigger: GCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR CCA 72 bp CAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTaGGTCAGACACTCCAGGGCTGCACATGTTCCAGCT +
Preference number: 3 (lower is better)
Translates to: QSTVAAGTCRRD*VRHSRAAHVPA
Trigger: AGCTGGAACATGTGCAGCCCTGGAGTGTCTGACCCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CAA 90 bp ACACCGAGGCCCTGGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCAAACAGAGTTTGTTTTaGGCCTCTCCTCTCCCTCCA +
Preference number: 3 (lower is better)
Translates to: TPRPWGSVHQTGVHRGGCKQSLF*ASPLPP
Trigger: TGGAGGGAGAGGAGAGGCCAAAAACAAACTCTGTTT...GCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCTCGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR GCA 72 bp CATCATAGATGGCGAGCATCCTGTGGCCGTCGGCAATaGCCACGCGCACAGCTGAGCGTACGGCTGCGTTCA +
Preference number: 3 (lower is better)
Translates to: HHRWRASCGRRQ*PRAQLSVRLRS
Trigger: TGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATCTATGATG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CCA 72 bp CATCTGCTCCTCCCAGCCTTCCTCTGGTGGAGATTCTaGAAGGAACACCCAGTCCGCACCGCAGGCCAAGGC +
Preference number: 3 (lower is better)
Translates to: HLLLPAFLWWRF*KEHPVRTAGQG
Trigger: GCCTTGGCCTGCGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGGGAGGAGCAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CCA 72 bp TCTGGCCCTTGGCGAAGCCGTCAAAGCCATCATAGATaGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGC +
Preference number: 3 (lower is better)
Translates to: SGPWRSRQSHHR*RASCGRRQCPR
Trigger: GCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAGGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR GCA 72 bp CGTGTAATGCATCGTGCACCGACGAGACACCCAAGGTaGCCAGGCTGGCCTGACAAGCAGCTTCTGTCCCAG +
Preference number: 3 (lower is better)
Translates to: RVMHRAPTRHPR*PGWPDKQLLSQ
Trigger: CTGGGACAGAAGCTGCTTGTCAGGCCAGCCTGGGCACCTTGGGTGTCTCGTCGGTGCACGATGCATTACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR-3UTR CAA 90 bp CTGCTTGATGCGGTCGCAGGTGTCGGTGATAGTGTTCAGGGCGGTGTCTGCCCCCGGTTCTCCGAGAGTTaGACACACATCTGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: LLDAVAGVGDSVQGGVCPRFSES*THICSS
Trigger: GGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACCG...GGGGCAGACACCGCCCTGAACACTATCACCGACACCTGCGACCGCATCAAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR TCA 72 bp AAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTaGTTCAGGAAACTCCATCACACCGAGGCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: KRCTRVSHVCLR*FRKLHHTEALG
Trigger: CCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
3UTR GCA 72 bp TACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATaGAGGCGGGACTGGGTCAGACACTCCAGGGCTGCA +
Preference number: 3 (lower is better)
Translates to: YKNRQSTVAAGT*RRDWVRHSRAA
Trigger: TGCAGCCCTGGAGTGTCTGACCCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CAA 90 bp GAACCCGGCACATTGTTGGACACAGTAGCGGGAACCATGACCATGGGGACACAGGCGGGTGCCCCCACGTaGATGACAGCTACGTTGCAA +
Preference number: 3 (lower is better)
Translates to: EPGTLLDTVAGTMTMGTQAGAPT*MTATLQ
Trigger: TTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGC...CTGTGTCCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR TCA 72 bp CCCGCAAAGCTCCTCCCTCGGAGTCGAACCGCATCTTaGAATCTCCTCTCGTCCATCGCCTTCTGCACATCC +
Preference number: 3 (lower is better)
Translates to: PAKLLPRSRTAS*NLLSSIAFCTS
Trigger: GGATGTGCAGAAGGCGATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTCCGAGGGAGGAGCTTTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR TCA 72 bp TCAGACACTCCAGGGCTGCACATGTTCCAGCTGGCCTaGGTCCGACACGTCATAGCTGGCCTTGTACTTGGC +
Preference number: 3 (lower is better)
Translates to: SDTPGLHMFQLA*VRHVIAGLVLG
Trigger: GCCAAGTACAAGGCCAGCTATGACGTGTCGGACTCAGGCCAGCTGGAACATGTGCAGCCCTGGAGTGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR GCA 72 bp GTCGCAGGTGTCGGTGATAGTGTTCAGGGCGGTGTCTaGCCCGATGCTGAAATCGGAACCCGGCACATTGTT +
Preference number: 3 (lower is better)
Translates to: VAGVGDSVQGGV*PDAEIGTRHIV
Trigger: AACAATGTGCCGGGTTCCGATTTCAGCATCGGGGCAGACACCGCCCTGAACACTATCACCGACACCTGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CCA 72 bp CGCGGCGGCTGCATGGAAACCGTCCTGAGAAGCAAGTaGGTTGGGGTGAGTAAGCGCTTGCTTCATCGTTAC +
Preference number: 3 (lower is better)
Translates to: RGGCMETVLRSK*VGVSKRLLHRY
Trigger: GTAACGATGAAGCAAGCGCTTACTCACCCCAACCCACTTGCTTCTCAGGACGGTTTCCATGCAGCCGCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR CAA 90 bp GAACCCGGCACATTGTTGGACACAGTAGCGGGAACCATGACCATGGGGACACAGGTCCAGCCGATTTCTTaGATCTGGCCCTTGGCGAAG +
Preference number: 3 (lower is better)
Translates to: EPGTLLDTVAGTMTMGTQVQPIS*IWPLAK
Trigger: CTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGGAC...CTGTGTCCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR GCA 72 bp TTCCGGGCACGGTTCTCCGAGAGTTTGACACACATCTaGTCCTCCCAGCCTTCCTCTGGTGGAGATTCTGGA +
Preference number: 3 (lower is better)
Translates to: FRARFSESLTHI*SSQPSSGGDSG
Trigger: TCCAGAATCTCCACCAGAGGAAGGCTGGGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACCGTGCCCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CAA 90 bp GCCGCGGGTGCCCCCACGTTGATGACAGCTACGTTGCAATTGGTCTTTGGGATCGAGTCGAACCGCATCTaGAAATCTCCTCTCGTCCAT +
Preference number: 3 (lower is better)
Translates to: AAGAPTLMTATLQLVFGIESNRI*KSPLVH
Trigger: ATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTC...GATCCCAAAGACCAATTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR GCA 72 bp TCGAATCCACCGATGATCAGCAGCGCGTTGATGCTGTaGGTGCGCATCTGTGTGGCGATCTCTTCCAAGTAC +
Preference number: 3 (lower is better)
Translates to: SNPPMISSALML*VRICVAISSKY
Trigger: GTACTTGGAAGAGATCGCCACACAGATGCGCACGCACAGCATCAACGCGCTGCTGATCATCGGTGGATTCGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CAA 90 bp GGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTCTGGCTTTGTTCTCCTaGTATGACGTGTGCATAGTT +
Preference number: 3 (lower is better)
Translates to: GVPRLPALIQETPSHRGPLALFS*YDVCIV
Trigger: AACTATGCACACGTCATACAAGGAGAACAAAGCCAG...AGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR CAA 90 bp GAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCGCGGGTGCCCCCACGTaGATGACAGCTACGTTGCAA +
Preference number: 3 (lower is better)
Translates to: EILVPKFLSNGEGAPPCCAGAPT*MTATLQ
Trigger: TTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGC...GCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CAA 90 bp GCAGTGATCCACTCCATAGCTCTGGCAGAGATTTTGGTTCCAAAGTTTCTATCACCGCTGGCGGACTGCTaGATGCGGTCGCAGGTGTCG +
Preference number: 3 (lower is better)
Translates to: AVIHSIALAEILVPKFLSPLADC*MRSQVS
Trigger: CGACACCTGCGACCGCATCAAGCAGTCCGCCAGCGG...TGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGCTATGGAGTGGATCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CAA 90 bp CTTGAGCCACCACTGTTCTTTGGGAATCCTGTGCTCAAAATCCGTTTGCTTCTTCCGATCACACACAGGTaGGTGATGCCGCGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: LEPPLFFGNPVLKIRLLLPITHR*VMPRCS
Trigger: GCTGCAGCGCGGCATCACCAACCTGTGTGTGATCGG...AAGAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
3UTR-3UTR CAA 90 bp TGGCAGAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTTCTTTGATCTGGCCCTaGGCGAAGCCGTCAAAGCCA +
Preference number: 3 (lower is better)
Translates to: WQRFWFQSFYQMERVPHPSLIWP*AKPSKP
Trigger: TGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAAGA...AGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CCA 72 bp GAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTTaGCTGTCGGACTCTGATTTCCCAAACAGAGTTTGT +
Preference number: 3 (lower is better)
Translates to: EPERKASALALS*LSDSDFPNRVC
Trigger: ACAAACTCTGTTTGGGAAATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR CCA 72 bp AATAACTTAAGTGTTACAAAAACAGACAGTCCACGGTaGCTGCAGGCACATGCAGGCGGGACTGGGTCAGAC +
Preference number: 3 (lower is better)
Translates to: NNLSVTKTDSPR*LQAHAGGTGSD
Trigger: GTCTGACCCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAGTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CAA 90 bp TGGGTTGGGGTGAGTAAGCGCTTGCTTCATCGTTACAGAGCCAGAAAGGAAAGCTTTCCCAAACAGAGTTaGTTTTTGGCCTCTCCTCTC +
Preference number: 3 (lower is better)
Translates to: WVGVSKRLLHRYRARKESFPKQS*FLASPL
Trigger: GAGAGGAGAGGCCAAAAACAAACTCTGTTTGGGAAA...GCTTTCCTTTCTGGCTCTGTAACGATGAAGCAAGCGCTTACTCACCCCAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR-3UTR CAA 90 bp AGCTACGTTGCAATTGGTCTTTGGGATCTGATCATCCGGCAGCTTGATGGCAAGGGTGATGGGTTTATTTaGGGTATCAATTGCTCCTTC +
Preference number: 3 (lower is better)
Translates to: SYVAIGLWDLIIRQLDGKGDGFI*GINCSF
Trigger: GAAGGAGCAATTGATACCCAAAATAAACCCATCACC...CTTGCCATCAAGCTGCCGGATGATCAGATCCCAAAGACCAATTGCAACGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR TCA 72 bp ACACGCCTTTGCCCTCTTCTGAATACAGCTGGTAAATaGAGTCGGTGGTGTAGTTTTCACTGCAGCTCTCAT +
Preference number: 3 (lower is better)
Translates to: TRLCPLLNTAGK*SRWCSFHCSSH
Trigger: ATGAGAGCTGCAGTGAAAACTACACCACCGACTTCATTTACCAGCTGTATTCAGAAGAGGGCAAAGGCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR TCA 72 bp GTTCTTCCTGCAGTCAAACACGCCTTTGCCCTCTTCTaGATACAGCTGGTAAATGAAGTCGGTGGTGTAGTT +
Preference number: 3 (lower is better)
Translates to: VLPAVKHAFALF*IQLVNEVGGVV
Trigger: AACTACACCACCGACTTCATTTACCAGCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACTGCAGGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CAA 90 bp AGTTTTGCAGTGATCCACTCCATAGCTCTGGCAGAGATTTTGGTTCCAAAGTTTGAGTCGAACCGCATCTaGAAATCTCCTCTCGTCCAT +
Preference number: 3 (lower is better)
Translates to: SFAVIHSIALAEILVPKFESNRI*KSPLVH
Trigger: ATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTC...AAACTTTGGAACCAAAATCTCTGCCAGAGCTATGGAGTGGATCACTGCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR-3UTR CAA 90 bp GCAGTGATCCACTCCATAGCTCTGGCAGAGATTTTGGTTCCAAAGTTTCTATCAGGTGATGGGTTTATTTaGGGTATCAATTGCTCCTTC +
Preference number: 3 (lower is better)
Translates to: AVIHSIALAEILVPKFLSGDGFI*GINCSF
Trigger: GAAGGAGCAATTGATACCCAAAATAAACCCATCACC...TGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGCTATGGAGTGGATCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp ACACCGAGGCCCTGGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCCCTCTAGCAAGGCGATaGCTGCCTCCACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: TPRPWGSVHQTGVHRGGCPLARR*LPPLPC
Trigger: GCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGG...GCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCTCGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp ACACCGAGGCCCTGGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCACATGCAGGCGGGACTaGGTCAGACACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TPRPWGSVHQTGVHRGGCTCRRD*VRHSRA
Trigger: AGCCCTGGAGTGTCTGACCCAGTCCCGCCTGCATGT...GCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCTCGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp TCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCGGCAGGCGCACGGCGTaGTTCCCGTTCAGTGACACG +
Preference number: 4 (lower is better)
Translates to: SGVASSKAMTASTPMRLAGRRTA*FPFSDT
Trigger: CGTGTCACTGAACGGGAACCACGCCGTGCGCCTGCC...GGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GGTTCCCGTTCAGTGACACGACGCAAGCTGGGGTGTCCGGGGTGGCCTCTAGCACGCGTGCGGAAGGCCTaGCACCGCGCACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: GSRSVTRRKLGCPGWPLARVRKA*HRALPM
Trigger: CATTGGCAGTGCGCGGTGCCAGGCCTTCCGCACGCG...TGCTAGAGGCCACCCCGGACACCCCAGCTTGCGTCGTGTCACTGAACGGGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CAA 72 bp CAAGCAGCTTCTGTCCCAGCCGTCTCCGCCCTGCCCTaGGCCATGGGCTGCCCACTCACCATCTGCACGCAC +
Preference number: 4 (lower is better)
Translates to: QAASVPAVSALP*AMGCPLTICTH
Trigger: GTGCGTGCAGATGGTGAGTGGGCAGCCCATGGCCAAGGGCAGGGCGGAGACGGCTGGGACAGAAGCTGCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR TCA 90 bp GCCCTGCCCTTGGCCATGGGCTGCCCACTCACCATCTGCACGCACTCCATCAGCACCGCGCACTGCCAATaGTCGTCCCGCCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: ALPLAMGCPLTICTHSISTAHCQ*SSRPLA
Trigger: TGCAAGTGGGCGGGACGATCATTGGCAGTGCGCGGT...GCTGATGGAGTGCGTGCAGATGGTGAGTGGGCAGCCCATGGCCAAGGGCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR GCA 90 bp ATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGCACAGCTGAGCGTACGCCACGTAGATACCCATaGGCACCACGGCACGGACGG +
Preference number: 4 (lower is better)
Translates to: MASILWPSAMPTRTAERTPRRYP*APRHGR
Trigger: CCGTCCGTGCCGTGGTGCGCATGGGTATCTACGTGG...CGTACGCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGGGGGTCCCTCCTCTCTaGACGTGCCCGAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: PTSACADSGNSITPRPWGGVPPL*TCPRMV
Trigger: GACCATCCTCGGGCACGTGCAGAGAGGAGGGACCCC...CCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGG
66% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp ACACCGAGGCCCTGGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCGTTAGCCAGGAGGCCTaGAGGGACCTAGGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: TPRPWGSVHQTGVHRGGCVSQEA*RDLGFK
Trigger: TTTGAAGCCTAGGTCCCTGCAGGCCTCCTGGCTAAC...GCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCTCGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp ACACCGAGGCCCTGGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCTGTCCCACGTCTGCCTaGGCTGATTCAGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: TPRPWGSVHQTGVHRGGCCPTSA*ADSGNS
Trigger: GGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACA...GCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCTCGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp TCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCACGAGACACCCAAGGTaGCCAGGCTGGCCTGACAAG +
Preference number: 4 (lower is better)
Translates to: SGVASSKAMTASTPMRLATRHPR*PGWPDK
Trigger: CTTGTCAGGCCAGCCTGGGCACCTTGGGTGTCTCGT...GGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR CCA 90 bp GGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGACAGACAGTCCACGGTaGCTGCAGGCACATGCAGGC +
Preference number: 4 (lower is better)
Translates to: GVSGVASSKAMTASTPMRTDSPR*LQAHAG
Trigger: GCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGT...CCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGACAGACAGCACGCACTaGAGCAGGTGGGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: GVSGVASSKAMTASTPMRTDSTH*SRWGRW
Trigger: CCATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGT...CCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GCCCTGCCCTTGGCCATGGGCTGCCCACTCACCATCTGCACGCACTCCATCAGCCCTCTAGCAAGGCGATaGCTGCCTCCACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: ALPLAMGCPLTICTHSISPLARR*LPPLPC
Trigger: GCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGG...GCTGATGGAGTGCGTGCAGATGGTGAGTGGGCAGCCCATGGCCAAGGGCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR TCA 90 bp ACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTCGCTGGCGGACTGCTTaGTGCGGTCGCAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: TSACADSGNSITPRPWGSRWRTA*CGRRCR
Trigger: CCGACACCTGCGACCGCATCAAGCAGTCCGCCAGCG...ACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp GTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCAAGATCGGGGTCCCTCCTCTCTaGACGTGCCCGAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: VASSKAMTASTPMRLAKIGVPPL*TCPRMV
Trigger: GACCATCCTCGGGCACGTGCAGAGAGGAGGGACCCC...GATCTTGGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTGACACGACGCAAGCTGGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTTGTGGCCGTCGGCAATaGCCACGCGCACAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SDTTQAGVSGVASSKAMTCGRRQ*PRAQLS
Trigger: GCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACA...AGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCCAGCTTGCGTCGTGTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GCCCTGCCCTTGGCCATGGGCTGCCCACTCACCATCTGCACGCACTCCATCAGCTGCCCACTCACCATCTaGACGCACTCCATCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ALPLAMGCPLTICTHSISCPLTI*THSISG
Trigger: GCCGCTGATGGAGTGCGTGCAGATGGTGAGTGGGCA...GCTGATGGAGTGCGTGCAGATGGTGAGTGGGCAGCCCATGGCCAAGGGCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR GCA 90 bp GCGGGAACCATGACCATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTAGCCCCGCCAGGGATTaGACGGATCGGGACACTCCA +
Preference number: 4 (lower is better)
Translates to: AGTMTMGTQNSSCFSRAASPARD*TDRDTP
Trigger: TGGAGTGTCCCGATCCGTGCAATCCCTGGCGGGGCT...AGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCATGGTCATGGTTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR CCA 90 bp AGTGACACGACGCAAGCTGGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTACGCACTGGAGCAGGTaGGGCAGATGGGCACTCGCC +
Preference number: 4 (lower is better)
Translates to: SDTTQAGVSGVASSKAMTTHWSR*GRWALA
Trigger: GGCGAGTGCCCATCTGCCCCACCTGCTCCAGTGCGT...AGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCCAGCTTGCGTCGTGTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ACACCGAGGCCCTGGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCCTCCCAGCCTTCCTCTaGTGGAGATTCTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: TPRPWGSVHQTGVHRGGCLPAFL*WRFWKE
Trigger: TTCCTTCCAGAATCTCCACCAGAGGAAGGCTGGGAG...GCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCTCGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp ATGCCGAAGGGGTCCCTCCTCTCTGCACGTGCCCGAGGATGGTCACACGTGTGTTCTCCGCCCTGCCCTTaGCCATGGGCTGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: MPKGSLLSARARGWSHVCSPPCP*PWAAHS
Trigger: TGAGTGGGCAGCCCATGGCCAAGGGCAGGGCGGAGA...ACACACGTGTGACCATCCTCGGGCACGTGCAGAGAGGAGGGACCCCTTCGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR TCA 90 bp ATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGCACAGCTGAGCGTACGGGTAGCCCTCGTAGATaGAGTACACCTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: MASILWPSAMPTRTAERTGSPRR*STPWPP
Trigger: TGGGGGCCAAGGTGTACTTCATCTACGAGGGCTACC...CGTACGCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCAAGATCGGCCTCTGCGATGTTTaGGCCTCCGTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: VASSKAMTASTPMRLAKIGLCDV*ASVHHA
Trigger: GGCATGGTGGACGGAGGCTCAAACATCGCAGAGGCC...GATCTTGGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GGTTCCCGTTCAGTGACACGACGCAAGCTGGGGTGTCCGGGGTGGCCTCTAGCAGTGGTTCCCGTTCAGTaGCACGACGCAAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GSRSVTRRKLGCPGWPLAVVPVQ*HDASWG
Trigger: ACCCCAGCTTGCGTCGTGTCACTGAACGGGAACCAC...TGCTAGAGGCCACCCCGGACACCCCAGCTTGCGTCGTGTCACTGAACGGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTGTCGCCCACGCGCACAGCTaGGCGTACGGCTGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: SACADSGNSITPRPWGSVAHAHS*AYGCVH
Trigger: ATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGC...GACACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp GGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGATCAAATGGAGAGGGTaGCCCACCCTGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: GVSGVASSKAMTASTPMRIKWRG*PTLLHV
Trigger: CACATGCAGCAGGGTGGGGCACCCTCTCCATTTGAT...CCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GCGGGAACCATGACCATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTACACAGAACTCCTCGTaGTTCTCCCGGGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: AGTMTMGTQNSSCFSRAATQNSS*FSRAAD
Trigger: GTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGT...AGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCATGGTCATGGTTCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCCAGCCCCTGTGCAGTaGGCGGCCCCGAAACGGGAG +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADPAPVQ*AAPKRE
Trigger: CTCCCGTTTCGGGGCCGCGCACTGCACAGGGGCTGG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676796.1
CDS-3UTR CCA 90 bp AGTAGCGGGAACCATGACCATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCACGCACTGGAGCAGGTaGGGCAGATGGGCACTCGCC +
Preference number: 4 (lower is better)
Translates to: SSGNHDHGDTELLVLLPGTHWSR*GRWALA
Trigger: GGCGAGTGCCCATCTGCCCCACCTGCTCCAGTGCGT...GCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCATGGTCATGGTTCCCGCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCGTTTTGTCCCAAGAATaGAGCCTCCTTGGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SGVASSKAMTASTPMRLAVLSQE*SLLGRS
Trigger: GGACCGGCCAAGGAGGCTCCATTCTTGGGACAAAAC...GGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGTCCGCAAGGAGCCCTTaGGGGCCCGGGAGTCGTCCG +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWSARSP*GPGSRP
Trigger: CGGACGACTCCCGGGCCCCCAAGGGCTCCTTGCGGA...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS-3UTR CCA 90 bp TGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCATGGAAACCGTCCTGAGAAGTCCCCGGCCCCGTGCTaGGCTCTTTCCCAGATACCT +
Preference number: 4 (lower is better)
Translates to: CPPDGSSPRRLHGNRPEKSPAPC*ALSQIP
Trigger: AGGTATCTGGGAAAGAGCCCAGCACGGGGCCGGGGA...CTTCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp AGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCATGGAAACCGTCCTGAGAATCACACCGAGGCCCTaGGGGAGTGTCCACCAGACG +
Preference number: 4 (lower is better)
Translates to: SVHQTGVHRGGCMETVLRITPRP*GSVHQT
Trigger: CGTCTGGTGGACACTCCCCCAGGGCCTCGGTGTGAT...TCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCGCTGGCGGACTGCTTaGTGCGGTCGCAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADRWRTA*CGRRCR
Trigger: CCGACACCTGCGACCGCATCAAGCAGTCCGCCAGCG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGGCGAGGAAGGGGACTTaGGCCACCTCTGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AQGCPTSACADSGNSITPARKGT*ATSALS
Trigger: GGAGAGCGCAGAGGTGGCTCAAGTCCCCTTCCTCGC...CGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp GTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGCCACGTAGATACCCATaGGCACCACGGCACGGACGG +
Preference number: 4 (lower is better)
Translates to: VKAIIDGEHPVAVGNAHAPRRYP*APRHGR
Trigger: CCGTCCGTGCCGTGGTGCGCATGGGTATCTACGTGG...CGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGCTTGATGCGGTCGCAGGTGTCGGTGATAGTGTTCAGGGCGGTGTCTGCCCCGAGCGCGTTGATGCTGTaGGTGCGCATCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: CLMRSQVSVIVFRAVSAPSALML*VRICVA
Trigger: CGCCACACAGATGCGCACGCACAGCATCAACGCGCT...CGGGGCAGACACCGCCCTGAACACTATCACCGACACCTGCGACCGCATCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCGTTCACCGCGGCGGCTaGATGGAAACCGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GCPTSACADSGNSITPRPVHRGG*METVLR
Trigger: TCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAAC...GGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGGCCGCGTCTCCAGCCTaGGCGATCGCTAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWAASPA*AIAKAP
Trigger: GGGAGCCTTAGCGATCGCGCAGGCTGGAGACGCGGC...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676796.1
CDS-3UTR CCA 90 bp CTGCTTGATGCGGTCGCAGGTGTCGGTGATAGTGTTCAGGGCGGTGTCTGCCCCACATGCAGGCGGGACTaGGTCAGACACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLDAVAGVGDSVQGGVCPTCRRD*VRHSRA
Trigger: AGCCCTGGAGTGTCTGACCCAGTCCCGCCTGCATGT...GGGGCAGACACCGCCCTGAACACTATCACCGACACCTGCGACCGCATCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TCCACCCAGCTCTCTGCCCCCATTTCTGAGGCGCAGCTGTTCTCTCTTGCAGACACGCACTGGAGCAGGTaGGGCAGATGGGCACTCGCC +
Preference number: 4 (lower is better)
Translates to: STQLSAPISEAQLFSLADTHWSR*GRWALA
Trigger: GGCGAGTGCCCATCTGCCCCACCTGCTCCAGTGCGT...GTCTGCAAGAGAGAACAGCTGCGCCTCAGAAATGGGGGCAGAGAGCTGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCGCGTGCGGAAGGCCTaGCACCGCGCACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWRVRKA*HRALPM
Trigger: CATTGGCAGTGCGCGGTGCCAGGCCTTCCGCACGCG...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTATGGCGAGCATCCTGTaGCCGTCGGCAATGCCCACG +
Preference number: 4 (lower is better)
Translates to: TSACADSGNSITPRPWGSMASIL*PSAMPT
Trigger: CGTGGGCATTGCCGACGGCCACAGGATGCTCGCCAT...ACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp TCCTCTGGTGGAGATTCTGGAAGGAACACCCAGTCCGCACCGCAGGCCAAGGCAATGGCGAGCATCCTGTaGCCGTCGGCAATGCCCACG +
Preference number: 4 (lower is better)
Translates to: SSGGDSGRNTQSAPQAKAMASIL*PSAMPT
Trigger: CGTGGGCATTGCCGACGGCCACAGGATGCTCGCCAT...TGCCTTGGCCTGCGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATTGGTCAGCACGCCGATaGCCTTGCCGGCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADWSARR*PCRPRR
Trigger: TCTCCGGGGCCGGCAAGGCCATCGGCGTGCTGACCA...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS-3UTR TCA 90 bp GCGGGAACCATGACCATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTATGTTCCAGCTGGCCTaGGTCCGACACGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: AGTMTMGTQNSSCFSRAAMFQLA*VRHVIA
Trigger: AGCTATGACGTGTCGGACTCAGGCCAGCTGGAACAT...AGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCATGGTCATGGTTCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCGCACATCTGAAAGCATaGGACACACTCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: SGVASSKAMTASTPMRLAAHLKA*DTLHRQ
Trigger: CTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGC...GGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCAAGATCCCATGCCCACCACGTTaGGGTAGGCGTACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VASSKAMTASTPMRLAKIPCPPR*GRRTSA
Trigger: TGCAGAAGTACGCCTACCTCAACGTGGTGGGCATGG...GATCTTGGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR TCA 90 bp ATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTGCCTTCTGCACATCCTaGGTCATCTGCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: MGTQNSSCFSRAADSSRSAFCTS*VICTHS
Trigger: GGAGTGCGTGCAGATGACTCAGGATGTGCAGAAGGC...ACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGCCCACGCGCACAGCTaGGCGTACGGCTGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADAHAHS*AYGCVH
Trigger: ATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCAAGATCTGTCTGCCCCGATGCTaGAATCGGAACCCGGCACAT +
Preference number: 4 (lower is better)
Translates to: VASSKAMTASTPMRLAKICLPRC*NRNPAH
Trigger: ATGTGCCGGGTTCCGATTTCAGCATCGGGGCAGACA...GATCTTGGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCGCTGGCGGACTGCTTaGTGCGGTCGCAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTRWRTA*CGRRCR
Trigger: CCGACACCTGCGACCGCATCAAGCAGTCCGCCAGCG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGGCAAGTGGGTTGGGGTaGGTAAGCGCTTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: PTSACADSGNSITPRPWGASGLG*VSACFI
Trigger: GATGAAGCAAGCGCTTACTCACCCCAACCCACTTGC...CCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp GTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCAAGATCCACGTTTTCTTTCTCTaGGAACCCAGCCCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: VASSKAMTASTPMRLAKIHVFFL*EPSPAR
Trigger: CCTGGCGGGGCTGGGTTCTCAGAGAAAGAAAACGTG...GATCTTGGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR TCA 90 bp TCCTCTGGTGGAGATTCTGGAAGGAACACCCAGTCCGCACCGCAGGCCAAGGCAACAAGGGAAGCGGTGTaGCCAGCAGCCAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSGGDSGRNTQSAPQAKATREAV*PAARLL
Trigger: GAGAAGCCTGGCTGCTGGTCACACCGCTTCCCTTGT...TGCCTTGGCCTGCGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR GCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGGGGTCCCTCCTCTCTaGACGTGCCCGAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADGVPPL*TCPRMV
Trigger: GACCATCCTCGGGCACGTGCAGAGAGGAGGGACCCC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGCAAGATCCTGTCGAATaGCGAAGGGGTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PTSACADSGNSITPRPWGQDPVE*RRGPSS
Trigger: AGAGGAGGGACCCCTTCGGCATTCGACAGGATCTTG...CCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCATCCCAGCCGCGGGTaGCCCCACGTTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWHPSRG*PHVDDS
Trigger: GCTGTCATCAACGTGGGGGCACCCGCGGCTGGGATG...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCATCCCAGCCGCGGGTaGCCCCACGTTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADHPSRG*PHVDDS
Trigger: GCTGTCATCAACGTGGGGGCACCCGCGGCTGGGATG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGTGTGGCCGTCGGCAATaGCCACGCGCACAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWCGRRQ*PRAQLS
Trigger: GCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACA...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGCACGCCGATGGCCTTaGCGGCCCCGGAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGARRWP*RPRRGA
Trigger: AGCACCTCTCCGGGGCCGGCAAGGCCATCGGCGTGC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS-3UTR GCA 90 bp CCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGGACTTGAGCCACCTCTaGGCTCTCCAGTTGCACGTT +
Preference number: 4 (lower is better)
Translates to: PTSACADSGNSITPRPWGDLSHL*ALQLHV
Trigger: AACGTGCAACTGGAGAGCGCAGAGGTGGCTCAAGTC...CCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp TGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTCCCGTGTAATGCATCGTaGACCGACGAGACACCCAAG +
Preference number: 4 (lower is better)
Translates to: WGHRTPRASPGRLTAPGVPCNAS*TDETPK
Trigger: CTTGGGTGTCTCGTCGGTGCACGATGCATTACACGG...GACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR CCA 90 bp CCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGCCGACACGTCATAGCTaGCCTTGTACTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PTSACADSGNSITPRPWGPTRHS*PCTWPG
Trigger: TCCTGGCCAAGTACAAGGCCAGCTATGACGTGTCGG...CCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp TGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTCCCGACACGTCATAGCTaGCCTTGTACTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WGHRTPRASPGRLTAPGVPTRHS*PCTWPG
Trigger: TCCTGGCCAAGTACAAGGCCAGCTATGACGTGTCGG...GACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGACGCACTGGAGCAGGTaGGGCAGATGGGCACTCGCC +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWTHWSR*GRWALA
Trigger: GGCGAGTGCCCATCTGCCCCACCTGCTCCAGTGCGT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GCGTACTTCTGCACGGCCTCCTTATCGATCTGGCCGTTCCTGGCCAGCTCCTCCCCACTTGCAGGATGCTaGAGACACTCTCCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: AYFCTASLSIWPFLASSSPLAGC*RHSPSR
Trigger: CCGACTGGGAGAGTGTCTCCAGCATCCTGCAAGTGG...GGAGGAGCTGGCCAGGAACGGCCAGATCGATAAGGAGGCCGTGCAGAAGTACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCGCGTGCGGAAGGCCTaGCACCGCGCACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTRVRKA*HRALPM
Trigger: CATTGGCAGTGCGCGGTGCCAGGCCTTCCGCACGCG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCGATCTGGCCGTTCCTaGCCAGCTCCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADRSGRS*PAPPAA
Trigger: GGCTGCTGGAGGAGCTGGCCAGGAACGGCCAGATCG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCGATCTGGCCGTTCCTaGCCAGCTCCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWRSGRS*PAPPAA
Trigger: GGCTGCTGGAGGAGCTGGCCAGGAACGGCCAGATCG...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp AGGCCGTGTAATGCATCGTGCACCGACGAGACACCCAAGGTGCCCAGGCTGGCCCTCTGGTGGAGATTCTaGAAGGAACACCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: RPCNASCTDETPKVPRLALWWRF*KEHPVR
Trigger: GCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAG...GGCCAGCCTGGGCACCTTGGGTGTCTCGTCGGTGCACGATGCATTACACGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGGGCAGGCGCACGGCGTaGTTCCCGTTCAGTGACACG +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWGRRTA*FPFSDT
Trigger: CGTGTCACTGAACGGGAACCACGCCGTGCGCCTGCC...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGGTTTTGTCCCAAGAATaGAGCCTCCTTGGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: PTSACADSGNSITPRPWGVLSQE*SLLGRS
Trigger: GGACCGGCCAAGGAGGCTCCATTCTTGGGACAAAAC...CCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp GCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGATCACACCGAGGCCCTaGGGGAGTGTCCACCAGACG +
Preference number: 4 (lower is better)
Translates to: AQGCPTSACADSGNSITPITPRP*GSVHQT
Trigger: CGTCTGGTGGACACTCCCCCAGGGCCTCGGTGTGAT...CGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR CCA 90 bp ATGCCGAAGGGGTCCCTCCTCTCTGCACGTGCCCGAGGATGGTCACACGTGTGTAGAACGAAGGTCCTCTaGTGGCGTTCCTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: MPKGSLLSARARGWSHVCRTKVL*WRSWPA
Trigger: AGCTGGCCAGGAACGCCACCAGAGGACCTTCGTTCT...ACACACGTGTGACCATCCTCGGGCACGTGCAGAGAGGAGGGACCCCTTCGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR CCA 90 bp CTTGGCGAAGCCGTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCCCAAGGTGCCCAGGCTaGCCTGACAAGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LGEAVKAIIDGEHPVAVGPRCPG*PDKQLL
Trigger: CAGAAGCTGCTTGTCAGGCCAGCCTGGGCACCTTGG...GCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
3UTR CAA 72 bp ATGAACACGCGCCGCTTGGTTCCGCTGGCGGACTGCTaGATGCGGTCGCAGGTGTCGGTGATAGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: MNTRRLVPLADC*MRSQVSVIVFR
Trigger: CCTGAACACTATCACCGACACCTGCGACCGCATCAAGCAGTCCGCCAGCGGAACCAAGCGGCGCGTGTTCAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATACCGCGCACTGCCAATaGTCGTCCCGCCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADTAHCQ*SSRPLA
Trigger: TGCAAGTGGGCGGGACGATCATTGGCAGTGCGCGGT...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATTCTGGGCCGTGGTCATaGTGGCGTCGACGACCTCGA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADSGPWS*WRRRPR
Trigger: TCGAGGTCGTCGACGCCATCATGACCACGGCCCAGA...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR TCA 90 bp GGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCGGTTCTCCGAGAGTTTaGCACACATCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GCPTSACADSGNSITPRPGSPRV*HTSAPP
Trigger: GGGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACC...GGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp ATGCATCGTGCACCGACGAGACACCCAAGGTGCCCAGGCTGGCCTGACAAGCAGGGTTCTCCGAGAGTTTaGCACACATCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: MHRAPTRHPRCPGWPDKQGSPRV*HTSAPP
Trigger: GGGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACC...CTGCTTGTCAGGCCAGCCTGGGCACCTTGGGTGTCTCGTCGGTGCACGATGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR TCA 90 bp AGTGACACGACGCAAGCTGGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTGATCATCCGGCAGCTTaGTGGCAAGTCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SDTTQAGVSGVASSKAMTDHPAA*WQVACR
Trigger: CCTACAAGCGACTTGCCATCAAGCTGCCGGATGATC...AGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCCAGCTTGCGTCGTGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCATGGAAACCGTCCTGAGAAGCACGTCTGCCTGCGCTaGTTCAGGAAACTCCATCAC +
Preference number: 4 (lower is better)
Translates to: CPPDGSSPRRLHGNRPEKHVCLR*FRKLHH
Trigger: GTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTG...CTTCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp ACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTCAGACACTCCAGGGCTaGACATGTTCCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TSACADSGNSITPRPWGSQTLQG*TCSSWP
Trigger: AGGCCAGCTGGAACATGTGCAGCCCTGGAGTGTCTG...ACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp GTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCAAGATCCAAGATCCTGTCGAATaGCGAAGGGGTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VASSKAMTASTPMRLAKIQDPVE*RRGPSS
Trigger: AGAGGAGGGACCCCTTCGGCATTCGACAGGATCTTG...GATCTTGGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCATCCCAGCCGCGGGTaGCCCCACGTTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTHPSRG*PHVDDS
Trigger: GCTGTCATCAACGTGGGGGCACCCGCGGCTGGGATG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTTGTGGCCGTCGGCAATaGCCACGCGCACAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTCGRRQ*PRAQLS
Trigger: GCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACA...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGCAGCCGTGTCTACTCTGGCAGGAGTCTTCCGGAGAGTTCCAACCTAGGTCCAGCGCGTTGATGCTGTaGGTGCGCATCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: QQPCLLWQESSGEFQPRSSALML*VRICVA
Trigger: CGCCACACAGATGCGCACGCACAGCATCAACGCGCT...GGACCTAGGTTGGAACTCTCCGGAAGACTCCTGCCAGAGTAGACACGGCTGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp TCCTCTGGTGGAGATTCTGGAAGGAACACCCAGTCCGCACCGCAGGCCAAGGCAGTTCAGGGCGGTGTCTaGCCCGATGCTGAAATCGGA +
Preference number: 4 (lower is better)
Translates to: SSGGDSGRNTQSAPQAKAVQGGV*PDAEIG
Trigger: TCCGATTTCAGCATCGGGGCAGACACCGCCCTGAAC...TGCCTTGGCCTGCGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAACCCGGCACATTGTTGGACACAGTAGCGGGAACCATGACCATGGGGACACAGGTTCCGCTGGCGGACTaGTTGATGCGGTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: EPGTLLDTVAGTMTMGTQVPLAD*LMRSQV
Trigger: CACCTGCGACCGCATCAAGCAGTCCGCCAGCGGAAC...CTGTGTCCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTGTCTGGACACCTTCTGCCTaGCTGTGCCAGGACACACTC +
Preference number: 4 (lower is better)
Translates to: SACADSGNSITPRPWGSVWTPSA*LCQDTL
Trigger: GAGTGTGTCCTGGCACAGGCAGGCAGAAGGTGTCCA...GACACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCCCAGGGTCCCGGCCTaGTGCTGTGGATGGAAACTG +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADPRVPA*CCGWKL
Trigger: CAGTTTCCATCCACAGCAGCAGGCCGGGACCCTGGG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp TGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTCCCAGCCTTCCTCTGGTaGAGATTCTGGAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: WGHRTPRASPGRLTAPGVPAFLW*RFWKEH
Trigger: GTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGG...GACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCAGGCGCACGGCGTaGTTCCCGTTCAGTGACACG +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTGRRTA*FPFSDT
Trigger: CGTGTCACTGAACGGGAACCACGCCGTGCGCCTGCC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTGGCAGGCGCACGGCGTaGTTCCCGTTCAGTGACACG +
Preference number: 4 (lower is better)
Translates to: SFYQMERVPHPAACDPARGRRTA*FPFSDT
Trigger: CGTGTCACTGAACGGGAACCACGCCGTGCGCCTGCC...ACGTGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ACACCGAGGCCCTGGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCATGGAAACTGACACATaGCAGATATGGAATGGTGAG +
Preference number: 4 (lower is better)
Translates to: TPRPWGSVHQTGVHRGGCMETDT*QIWNGE
Trigger: CTCACCATTCCATATCTGCCATGTGTCAGTTTCCAT...GCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCTCGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR CAA 72 bp ACGGCTGCGTTCATCCCAGCCGCGGGTGCCCCCACGTaGATGACAGCTACGTTGCAATTGGTCTTTGGGATC +
Preference number: 4 (lower is better)
Translates to: TAAFIPAAGAPT*MTATLQLVFGI
Trigger: GATCCCAAAGACCAATTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGCGGCTGGGATGAACGCAGCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp ACACCGAGGCCCTGGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCAATACAGCTGGTAAATaGAGTCGGTGGTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: TPRPWGSVHQTGVHRGGCNTAGK*SRWCSF
Trigger: AAAACTACACCACCGACTTCATTTACCAGCTGTATT...GCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCTCGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCCTCTGCGATGTTTaGGCCTCCGTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTGLCDV*ASVHHA
Trigger: GGCATGGTGGACGGAGGCTCAAACATCGCAGAGGCC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GTCAGGTGCTCCACGTTGGACTGCAGATCCCTGATGTCGAAGGGCTCTTCGAAACGTCGACGACCTCGATaGTCCTGTGCAGGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: VRCSTLDCRSLMSKGSSKRRRPR*SCAGRS
Trigger: ACTCCGCCCTGCACAGGATCATCGAGGTCGTCGACG...TTTCGAAGAGCCCTTCGACATCAGGGATCTGCAGTCCAACGTGGAGCACCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR TCA 90 bp TCTCCTCTCGTCCATCGCCTTCTGCACATCCTGAGTCATCTGCACGCACTCCATTCTGGGCCGTGGTCATaGTGGCGTCGACGACCTCGA +
Preference number: 4 (lower is better)
Translates to: SPLVHRLLHILSHLHALHSGPWS*WRRRPR
Trigger: TCGAGGTCGTCGACGCCATCATGACCACGGCCCAGA...ATGGAGTGCGTGCAGATGACTCAGGATGTGCAGAAGGCGATGGACGAGAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR TCA 90 bp CTTGGCGAAGCCGTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCGGTTCTCCGAGAGTTTaGCACACATCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LGEAVKAIIDGEHPVAVGGSPRV*HTSAPP
Trigger: GGGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACC...GCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp ATCAGCAGCGCGTTGATGCTGTGCGTGCGCATCTGTGTGGCGATCTCTTCCAAGCCTCTAGCAAGGCGATaGCTGCCTCCACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: ISSALMLCVRICVAISSKPLARR*LPPLPC
Trigger: GCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGG...CTTGGAAGAGATCGCCACACAGATGCGCACGCACAGCATCAACGCGCTGCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGGTGGTTCCCGTTCAGTaGCACGACGCAAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWVVPVQ*HDASWG
Trigger: ACCCCAGCTTGCGTCGTGTCACTGAACGGGAACCAC...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGCCCACGCGCACAGCTaGGCGTACGGCTGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRAHAHS*AYGCVH
Trigger: ATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGCCCACGCGCACAGCTaGGCGTACGGCTGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGAHAHS*AYGCVH
Trigger: ATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCAGCCCACGCGCACAGCTaGGCGTACGGCTGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: QSFYQMERVPHPAACDPAAHAHS*AYGCVH
Trigger: ATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGC...TGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp ACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTTCCCCTTGGCCTGTGTaGACTCCTGGCTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: TSACADSGNSITPRPWGSSPWPV*TPGFVL
Trigger: GAGAACAAAGCCAGGAGTTCACACAGGCCAAGGGGA...ACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp TGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCATGGAAACCGTCCTGAGAAGGCAGATATGGAATGGTaGGTAAACGTGGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: CPPDGSSPRRLHGNRPEKADMEW*VNVAFP
Trigger: GGGGAAGGCCACGTTTACTCACCATTCCATATCTGC...CTTCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp GGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTCTCTTCGAAAATGTATaGGGCATCAGCTCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: GVPRLPALIQETPSHRGPLFENV*GISSGR
Trigger: GCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAG...AGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp TCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTGTCATCAAATGGAGAGGGTaGCCCACCCTGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: SACADSGNSITPRPWGSVIKWRG*PTLLHV
Trigger: CACATGCAGCAGGGTGGGGCACCCTCTCCATTTGAT...GACACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR GCA 90 bp ACACCGAGGCCCTGGGGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCTTGCTTCTTCAGCTCTaGCACAGGTTGAAAAATAAC +
Preference number: 4 (lower is better)
Translates to: TPRPWGSVHQTGVHRGGCLLLQL*HRLKNN
Trigger: GTTATTTTTCAACCTGTGGCAGAGCTGAAGAAGCAA...GCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCCCCAGGGCCTCGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp GAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTTGGCTGTCGGACTCTGATACAGTCCACGGTGGCTaGAGGCACATGCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: EPERKASALALSWLSDSDTVHGG*RHMQAG
Trigger: TCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGT...ATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCCACGTAGATACCCATaGGCACCACGGCACGGACGG +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTPRRYP*APRHGR
Trigger: CCGTCCGTGCCGTGGTGCGCATGGGTATCTACGTGG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAACCCGGCACATTGTTGGACACAGTAGCGGGAACCATGACCATGGGGACACAGAGCCTCCGTCCACCATaGCCTGGTAGCCCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: EPGTLLDTVAGTMTMGTQSLRPP*PGSPRR
Trigger: TCTACGAGGGCTACCAGGGCATGGTGGACGGAGGCT...CTGTGTCCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GCCGCGGGTGCCCCCACGTTGATGACAGCTACGTTGCAATTGGTCTTTGGGATCCGCCCACTTGCAGGATaGTGGAGACACTCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: AAGAPTLMTATLQLVFGIRPLAG*WRHSPS
Trigger: ACTGGGAGAGTGTCTCCAGCATCCTGCAAGTGGGCG...GATCCCAAAGACCAATTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR GCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCGCGCTGCAGCAGGTTaGAAGCAGCCTTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGRAAAG*KQPSGG
Trigger: GCCGCCTGAAGGCTGCTTGCAACCTGCTGCAGCGCG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGCGCTGCAGCAGGTTaGAAGCAGCCTTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QSFYQMERVPHPAACDPARAAAG*KQPSGG
Trigger: GCCGCCTGAAGGCTGCTTGCAACCTGCTGCAGCGCG...TGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCCTCCTCTCTGCACGTaGCCGAGGATGGTCACACGT +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWPPLCT*PRMVTR
Trigger: ACGTGTGACCATCCTCGGGCACGTGCAGAGAGGAGG...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TCGAATCCACCGATGATCAGCAGCGCGTTGATGCTGTGCGTGCGCATCTGTGTGCCTCCTCTCTGCACGTaGCCGAGGATGGTCACACGT +
Preference number: 4 (lower is better)
Translates to: SNPPMISSALMLCVRICVPPLCT*PRMVTR
Trigger: ACGTGTGACCATCCTCGGGCACGTGCAGAGAGGAGG...CACACAGATGCGCACGCACAGCATCAACGCGCTGCTGATCATCGGTGGATTCGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGGGGTCCCTCCTCTCTaGACGTGCCCGAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRGVPPL*TCPRMV
Trigger: GACCATCCTCGGGCACGTGCAGAGAGGAGGGACCCC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCTGCCTCCACTCCCATaGGGCTGGCCAAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWLPPLP*GWPRSC
Trigger: ACAGGATCTTGGCCAGCCGCATGGGAGTGGAGGCAG...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TCCTCTGGTGGAGATTCTGGAAGGAACACCCAGTCCGCACCGCAGGCCAAGGCATGTAGGTGTTCAGGTTaGCCGCAAAGCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SSGGDSGRNTQSAPQAKACRCSG*PQSSSL
Trigger: GAGGGAGGAGCTTTGCGGGCAACCTGAACACCTACA...TGCCTTGGCCTGCGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGAGCGCGTTGATGCTGTaGGTGCGCATCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWSALML*VRICVA
Trigger: CGCCACACAGATGCGCACGCACAGCATCAACGCGCT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGACACAGAACTCCTCGTaGTTCTCCCGGGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWTQNSS*FSRAAD
Trigger: GTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAACCCGGCACATTGTTGGACACAGTAGCGGGAACCATGACCATGGGGACACAGACACAGAACTCCTCGTaGTTCTCCCGGGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: EPGTLLDTVAGTMTMGTQTQNSS*FSRAAD
Trigger: GTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGT...CTGTGTCCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GCCGCGGGTGCCCCCACGTTGATGACAGCTACGTTGCAATTGGTCTTTGGGATCGTTCAGGGCGGTGTCTaGCCCGATGCTGAAATCGGA +
Preference number: 4 (lower is better)
Translates to: AAGAPTLMTATLQLVFGIVQGGV*PDAEIG
Trigger: TCCGATTTCAGCATCGGGGCAGACACCGCCCTGAAC...GATCCCAAAGACCAATTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTGTTCACCGCGGCGGCTaGATGGAAACCGTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TSACADSGNSITPRPWGSVHRGG*METVSK
Trigger: TTTTGAGACGGTTTCCATGCAGCCGCCGCGGTGAAC...ACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433193.2
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGAGAACCCAGCCCCTGTaGAGTGCGCGGCCCCGAAAC +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRRTQPL*SARPRN
Trigger: GTTTCGGGGCCGCGCACTGCACAGGGGCTGGGTTCT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676796.1
CDS-3UTR CCA 90 bp GAACCCGGCACATTGTTGGACACAGTAGCGGGAACCATGACCATGGGGACACAGACATGCAGGCGGGACTaGGTCAGACACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: EPGTLLDTVAGTMTMGTQTCRRD*VRHSRA
Trigger: AGCCCTGGAGTGTCTGACCCAGTCCCGCCTGCATGT...CTGTGTCCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATACAGACAGCACGCACTaGAGCAGGTGGGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADTDSTH*SRWGRW
Trigger: CCATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGT...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TCCCTGATGTCGAAGGGCTCTTCGAAAATGTATGCGGCATCAGCTCCGGCCGCGCCACTTGCAGGATGCTaGAGACACTCTCCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: SLMSKGSSKMYAASAPAAPLAGC*RHSPSR
Trigger: CCGACTGGGAGAGTGTCTCCAGCATCCTGCAAGTGG...CGCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAGCCCTTCGACATCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCACGCGTGCGGAAGGCCTaGCACCGCGCACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: FQSFYQMERVPHPAACDPRVRKA*HRALPM
Trigger: CATTGGCAGTGCGCGGTGCCAGGCCTTCCGCACGCG...TGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATACGAAGGTCCTCTGGTaGCTCTGGGCCGTGGTCATG +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADTKVLW*LWAVVM
Trigger: CATGACCACGGCCCAGAGCCACCAGAGGACCTTCGT...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGAGAACGAAGGTCCTCTaGTGGCTCTGGGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWRTKVL*WLWAVV
Trigger: GACCACGGCCCAGAGCCACCAGAGGACCTTCGTTCT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp TGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCATGGAAACCGTCCTGAGAAGGCCTGCTGCTGTGGATaGAAACTGACACATGGCAGA +
Preference number: 4 (lower is better)
Translates to: CPPDGSSPRRLHGNRPEKACCCG*KLTHGR
Trigger: TCTGCCATGTGTCAGTTTCCATCCACAGCAGCAGGC...CTTCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp ATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTGCACATCTGAAAGCATaGGACACACTCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: MGTQNSSCFSRAADSSRSAHLKA*DTLHRQ
Trigger: CTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGC...ACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTACCGCGCACTGCCAATaGTCGTCCCGCCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGTAHCQ*SSRPLA
Trigger: TGCAAGTGGGCGGGACGATCATTGGCAGTGCGCGGT...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCGTCGACGACCTCGATaGTCCTGTGCAGGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRRRRPR*SCAGRS
Trigger: ACTCCGCCCTGCACAGGATCATCGAGGTCGTCGACG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR TCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCGTCGACGACCTCGATaGTCCTGTGCAGGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGRRRPR*SCAGRS
Trigger: ACTCCGCCCTGCACAGGATCATCGAGGTCGTCGACG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR TCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGTCTGGGCCGTGGTCATaGTGGCGTCGACGACCTCGA +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRSGPWS*WRRRPR
Trigger: TCGAGGTCGTCGACGCCATCATGACCACGGCCCAGA...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR TCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCCTCTAGCAAGGCGATaGCTGCCTCCACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTPLARR*LPPLPC
Trigger: GCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GCGTACTTCTGCACGGCCTCCTTATCGATCTGGCCGTTCCTGGCCAGCTCCTCCAGTCGAACCGCATCTTaGAATCTCCTCTCGTCCATC +
Preference number: 4 (lower is better)
Translates to: AYFCTASLSIWPFLASSSSRTAS*NLLSSI
Trigger: GATGGACGAGAGGAGATTTCAAGATGCGGTTCGACT...GGAGGAGCTGGCCAGGAACGGCCAGATCGATAAGGAGGCCGTGCAGAAGTACGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR TCA 90 bp AGTACTTCCCCGGGAGAACGCGTTTTGTCCCAAGAATGGAGCCTCCTTGGCCGGGATCATCCGGCAGCTTaGTGGCAAGTCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: STSPGERVLSQEWSLLGRDHPAA*WQVACR
Trigger: CCTACAAGCGACTTGCCATCAAGCTGCCGGATGATC...CCGGCCAAGGAGGCTCCATTCTTGGGACAAAACGCGTTCTCCCGGGGAAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCCCACGCGCACAGCTaGGCGTACGGCTGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: FQSFYQMERVPHPAACDPAHAHS*AYGCVH
Trigger: ATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGC...TGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATTGTCTGCCCCGATGCTaGAATCGGAACCCGGCACAT +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADCLPRC*NRNPAH
Trigger: ATGTGCCGGGTTCCGATTTCAGCATCGGGGCAGACA...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGTGTCTGCCCCGATGCTaGAATCGGAACCCGGCACAT +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWCLPRC*NRNPAH
Trigger: ATGTGCCGGGTTCCGATTTCAGCATCGGGGCAGACA...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCACGCTGGCGGACTGCTTaGTGCGGTCGCAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGARWRTA*CGRRCR
Trigger: CCGACACCTGCGACCGCATCAAGCAGTCCGCCAGCG...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp AGCTACGTTGCAATTGGTCTTTGGGATCTGATCATCCGGCAGCTTGATGGCAAGCGCTGGCGGACTGCTTaGTGCGGTCGCAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: SYVAIGLWDLIIRQLDGKRWRTA*CGRRCR
Trigger: CCGACACCTGCGACCGCATCAAGCAGTCCGCCAGCG...CTTGCCATCAAGCTGCCGGATGATCAGATCCCAAAGACCAATTGCAACGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CCAGCCGATTTCTTTGATCTGGCCCTTGGCGAAGCCGTCAAAGCCATCATAGATACCGCGCACTGCCAATaGTCGTCCCGCCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: PADFFDLALGEAVKAIIDTAHCQ*SSRPPE
Trigger: CTCTGGTGGGCGGGACGATCATTGGCAGTGCGCGGT...ATCTATGATGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGTGGCTGCAGGCACATaGAGGCGGGACTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRVAAGT*RRDWVR
Trigger: TCTGACCCAGTCCCGCCTGCATGTGCCTGCAGCCAC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCAGTGGCTGCAGGCACATaGAGGCGGGACTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: QSFYQMERVPHPAACDPAVAAGT*RRDWVR
Trigger: TCTGACCCAGTCCCGCCTGCATGTGCCTGCAGCCAC...TGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCCACGTAGATACCCATaGGCACCACGGCACGGACGG +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRPRRYP*APRHGR
Trigger: CCGTCCGTGCCGTGGTGCGCATGGGTATCTACGTGG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GGTCACACGTGTGTCATAGCCCAGCTGCGTGACGACAAGCTCTTTGATTTTCTCCGCGCTGCAGCAGGTTaGAAGCAGCCTTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GHTCVIAQLRDDKLFDFLRAAAG*KQPSGG
Trigger: GCCGCCTGAAGGCTGCTTGCAACCTGCTGCAGCGCG...GAGAAAATCAAAGAGCTTGTCGTCACGCAGCTGGGCTATGACACACGTGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCCTCCTCTCTGCACGTaGCCGAGGATGGTCACACGT +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTPPLCT*PRMVTR
Trigger: ACGTGTGACCATCCTCGGGCACGTGCAGAGAGGAGG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCTGCCTCCACTCCCATaGGGCTGGCCAAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTLPPLP*GWPRSC
Trigger: ACAGGATCTTGGCCAGCCGCATGGGAGTGGAGGCAG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTCTGCCTCCACTCCCATaGGGCTGGCCAAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: SFYQMERVPHPAACDPARLPPLP*GWPRSC
Trigger: ACAGGATCTTGGCCAGCCGCATGGGAGTGGAGGCAG...ACGTGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGTTCCGCTGGCGGACTaGTTGATGCGGTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRVPLAD*LMRSQV
Trigger: CACCTGCGACCGCATCAAGCAGTCCGCCAGCGGAAC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCTAAGGCTCCCAGGTTaGGTTCGCCTGGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRLRLPG*VRLGSA
Trigger: GGCGCTTCCCAGGCGAACGCAACCTGGGAGCCTTAG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676796.1
CDS-3UTR CCA 90 bp CCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAAAGTTTCTATCAAATaGAGAGGGTGCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: PTSACADSGNSITPRPWGKVSIK*RGCPTL
Trigger: CAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTT...CCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR CCA 90 bp TGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTCAAAGTTTCTATCAAATaGAGAGGGTGCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: WGHRTPRASPGRLTAPGVKVSIK*RGCPTL
Trigger: CAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTT...GACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCAACAGACAGTCCACGGTaGCTGCAGGCACATGCAGGC +
Preference number: 4 (lower is better)
Translates to: EKVHKGVPRLPALIQETPTDSPR*LQAHAG
Trigger: GCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGT...TGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTACAGACAGTCCACGGTaGCTGCAGGCACATGCAGGC +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTTDSPR*LQAHAG
Trigger: GCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGT...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCAACAGACAGCACGCACTaGAGCAGGTGGGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: KVHKGVPRLPALIQETPSTDSTH*SRWGRW
Trigger: CCATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGT...TGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp GTCAGGTGCTCCACGTTGGACTGCAGATCCCTGATGTCGAAGGGCTCTTCGAAAACAGACAGCACGCACTaGAGCAGGTGGGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: VRCSTLDCRSLMSKGSSKTDSTH*SRWGRW
Trigger: CCATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGT...TTTCGAAGAGCCCTTCGACATCAGGGATCTGCAGTCCAACGTGGAGCACCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGTCCTCTGGTGGCTCTaGGCCGTGGTCATGATGGCG +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRVLWWL*AVVMMA
Trigger: CGCCATCATGACCACGGCCCAGAGCCACCAGAGGAC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTACGAAGGTCCTCTGGTaGCTCTGGGCCGTGGTCATG +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTTKVLW*LWAVVM
Trigger: CATGACCACGGCCCAGAGCCACCAGAGGACCTTCGT...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTAGAACGAAGGTCCTCTaGTGGCTCTGGGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTRTKVL*WLWAVV
Trigger: GACCACGGCCCAGAGCCACCAGAGGACCTTCGTTCT...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp TCCCTGATGTCGAAGGGCTCTTCGAAAATGTATGCGGCATCAGCTCCGGCCGCGCTCTGGTGGAGATTCTaGAAGGAACACCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: SLMSKGSSKMYAASAPAALWWRF*KEHPVR
Trigger: GCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAG...CGCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAGCCCTTCGACATCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGCACGTGCCCGAGGATaGTCACACGTGTGTCATAGC +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADARARG*SHVCHS
Trigger: GCTATGACACACGTGTGACCATCCTCGGGCACGTGC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCCAGCTACGTTGCAATTaGTCTTTGGGATCTGATCAT +
Preference number: 4 (lower is better)
Translates to: SGVASSKAMTASTPMRLAQLRCN*SLGSDH
Trigger: ATGATCAGATCCCAAAGACCAATTGCAACGTAGCTG...GGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGATGGCGAGCATCCTGTaGCCGTCGGCAATGCCCACG +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRMASIL*PSAMPT
Trigger: CGTGGGCATTGCCGACGGCCACAGGATGCTCGCCAT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CTTCCTCTGGTGGAGATTCTGGAAGGAACACCCAGTCCGCACCGCAGGCCAAGGCAAAGCCATCATAGATaGCGAGCATCCTGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LPLVEILEGTPSPHRRPRQSHHR*RASCGR
Trigger: ACGGCCACAGGATGCTCGCCATCTATGATGGCTTTG...CCTTGGCCTGCGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAAGTCGTCCGCGTCCATaGCGAGGAGGCCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGASRPRP*RGGRGE
Trigger: CTCCCCTCGGCCTCCTCGCCATGGACGCGGACGACT...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381125.9
3UTR CAA 72 bp GCCCGCAAAGCTCCTCCCTCGGAGTCGAACCGCATCTaGAAATCTCCTCTCGTCCATCGCCTTCTGCACATC +
Preference number: 4 (lower is better)
Translates to: ARKAPPSESNRI*KSPLVHRLLHI
Trigger: GATGTGCAGAAGGCGATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTCCGAGGGAGGAGCTTTGCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
3UTR CAA 72 bp GTGTCTGCCCCGATGCTGAAATCGGAACCCGGCACATaGTTGGACACAGTAGCGGGAACCATGACCATGGGG +
Preference number: 4 (lower is better)
Translates to: VSAPMLKSEPGT*LDTVAGTMTMG
Trigger: CCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTCCGATTTCAGCATCGGGGCAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TCCCTGATGTCGAAGGGCTCTTCGAAAATGTATGCGGCATCAGCTCCGGCCGCGTGCAGCTCTCATTTCTaGGCACAAGGCCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLMSKGSSKMYAASAPAACSSHF*AQGLSG
Trigger: TCCAGAGAGGCCTTGTGCTCAGAAATGAGAGCTGCA...CGCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAGCCCTTCGACATCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATATGTTCCAGCTGGCCTaGGTCCGACACGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADMFQLA*VRHVIA
Trigger: AGCTATGACGTGTCGGACTCAGGCCAGCTGGAACAT...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCGCTCATATGCACATCTaGAAGCATGAGACACACTCC +
Preference number: 4 (lower is better)
Translates to: GCPTSACADSGNSITPRPAHMHI*KHETHS
Trigger: GGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGC...GGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp ATGCCGAAGGGGTCCCTCCTCTCTGCACGTGCCCGAGGATGGTCACACGTGTGTGCTCATATGCACATCTaGAAGCATGAGACACACTCC +
Preference number: 4 (lower is better)
Translates to: MPKGSLLSARARGWSHVCAHMHI*KHETHS
Trigger: GGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGC...ACACACGTGTGACCATCCTCGGGCACGTGCAGAGAGGAGGGACCCCTTCGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGGGTTCTCCGAGAGTTTaGCACACATCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWGSPRV*HTSAPP
Trigger: GGGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACC...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGGTTCTCCGAGAGTTTaGCACACATCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADGSPRV*HTSAPP
Trigger: GGGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCCTCTAGCAAGGCGATaGCTGCCTCCACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRPLARR*LPPLPC
Trigger: GCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGTGGTTCCCGTTCAGTaGCACGACGCAAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRVVPVQ*HDASWG
Trigger: ACCCCAGCTTGCGTCGTGTCACTGAACGGGAACCAC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGTGGTTCCCGTTCAGTaGCACGACGCAAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGVVPVQ*HDASWG
Trigger: ACCCCAGCTTGCGTCGTGTCACTGAACGGGAACCAC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CTTGGCGAAGCCGTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCAGTCGAACCGCATCTTaGAATCTCCTCTCGTCCATC +
Preference number: 4 (lower is better)
Translates to: LGEAVKAIIDGEHPVAVGSRTAS*NLLSSI
Trigger: GATGGACGAGAGGAGATTTCAAGATGCGGTTCGACT...GCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGATCATCCGGCAGCTTaGTGGCAAGTCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADDHPAA*WQVACR
Trigger: CCTACAAGCGACTTGCCATCAAGCTGCCGGATGATC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACGATCATCCGGCAGCTTaGTGGCAAGTCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: VHKGVPRLPALIQETPSHDHPAA*WQVACR
Trigger: CCTACAAGCGACTTGCCATCAAGCTGCCGGATGATC...GTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp TGGCAGAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTCGCTGGCGGACTGCTTaGTGCGGTCGCAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: WQRFWFQSFYQMERVPHPRWRTA*CGRRCR
Trigger: CCGACACCTGCGACCGCATCAAGCAGTCCGCCAGCG...AGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCACGTCTGCCTGCGCTaGTTCAGGAAACTCCATCAC +
Preference number: 4 (lower is better)
Translates to: VHKGVPRLPALIQETPSHHVCLR*FRKLHH
Trigger: GTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTG...GTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR GCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCTCTTCGAAAATGTATaGGGCATCAGCTCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADLFENV*GISSGR
Trigger: GCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGATTTTCTCCGTCAGGTaGTCCACGTTGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: VKAIIDGEHPVAVGNAHAIFSVR*STLDCR
Trigger: TCTGCAGTCCAACGTGGAGCACCTGACGGAGAAAAT...CGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGATCAAATGGAGAGGGTaGCCCACCCTGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWIKWRG*PTLLHV
Trigger: CACATGCAGCAGGGTGGGGCACCCTCTCCATTTGAT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATATCAAATGGAGAGGGTaGCCCACCCTGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADIKWRG*PTLLHV
Trigger: CACATGCAGCAGGGTGGGGCACCCTCTCCATTTGAT...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTGGCCTCCTTGAGTTTTaGAGTGATCCACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: TSACADSGNSITPRPWGSGLLEF*SDPLHS
Trigger: GCTATGGAGTGGATCACTGCAAAACTCAAGGAGGCC...ACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR GCA 90 bp GTCAGGTGCTCCACGTTGGACTGCAGATCCCTGATGTCGAAGGGCTCTTCGAAACAGACACTCCAGGGCTaGACATGTTCCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VRCSTLDCRSLMSKGSSKQTLQG*TCSSWP
Trigger: AGGCCAGCTGGAACATGTGCAGCCCTGGAGTGTCTG...TTTCGAAGAGCCCTTCGACATCAGGGATCTGCAGTCCAACGTGGAGCACCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AATGAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTGTGGCTGCAGGCACATaGAGGCGGGACTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: NEKVHKGVPRLPALIQETVAAGT*RRDWVR
Trigger: TCTGACCCAGTCCCGCCTGCATGTGCCTGCAGCCAC...AGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGAGCCTCCGTCCACCATaGCCTGGTAGCCCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRSLRPP*PGSPRR
Trigger: TCTACGAGGGCTACCAGGGCATGGTGGACGGAGGCT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCGCCCACTTGCAGGATaGTGGAGACACTCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTRPLAG*WRHSPS
Trigger: ACTGGGAGAGTGTCTCCAGCATCCTGCAAGTGGGCG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCACGCGCTGCAGCAGGTTaGAAGCAGCCTTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGARAAAG*KQPSGG
Trigger: GCCGCCTGAAGGCTGCTTGCAACCTGCTGCAGCGCG...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ATCAGCAGCGCGTTGATGCTGTGCGTGCGCATCTGTGTGGCGATCTCTTCCAAGCAAGATCCTGTCGAATaGCGAAGGGGTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISSALMLCVRICVAISSKQDPVE*RRGPSS
Trigger: AGAGGAGGGACCCCTTCGGCATTCGACAGGATCTTG...CTTGGAAGAGATCGCCACACAGATGCGCACGCACAGCATCAACGCGCTGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCTGCCTCCACTCCCATaGGGCTGGCCAAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRLPPLP*GWPRSC
Trigger: ACAGGATCTTGGCCAGCCGCATGGGAGTGGAGGCAG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCTGTGGCCGTCGGCAATaGCCACGCGCACAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: EILVPKFLSNGEGAPPCCCGRRQ*PRAQLS
Trigger: GCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACA...GCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGAGCGCGTTGATGCTGTaGGTGCGCATCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRSALML*VRICVA
Trigger: CGCCACACAGATGCGCACGCACAGCATCAACGCGCT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTAGCGCGTTGATGCTGTaGGTGCGCATCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGSALML*VRICVA
Trigger: CGCCACACAGATGCGCACGCACAGCATCAACGCGCT...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCAGTTCAGGGCGGTGTCTaGCCCGATGCTGAAATCGGA +
Preference number: 4 (lower is better)
Translates to: KVHKGVPRLPALIQETPSVQGGV*PDAEIG
Trigger: TCCGATTTCAGCATCGGGGCAGACACCGCCCTGAAC...TGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGCACAGTCGGCAGCTaGTGTCGACAGCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAGTVGS*CRQPRL
Trigger: CAGCCGTGGCTGTCGACAGCAGCTGCCGACTGTGCC...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp AAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCAACGTTGGACACCTTCTaGCTGCCTGTGCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: KVHKGVPRLPALIQETPSTLDTF*LPVPGH
Trigger: GTGTCCTGGCACAGGCAGGCAGAAGGTGTCCAACGT...TGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp GTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACTCTGCGCTCTCCAGTTaGACGTTGGACACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VHKGVPRLPALIQETPSHSALSS*TLDTFC
Trigger: GCAGAAGGTGTCCAACGTGCAACTGGAGAGCGCAGA...GTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp TGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGCTAAGGCAAACGCTATaGAGTAGCCTTCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: CPTSACADSGNSITPRPWLRQTL*SSLPDS
Trigger: GGAGTCTGGAAGGCTACTGCATAGCGTTTGCCTTAG...CCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp CCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGGTCTCAAAATCCGTTTaGTTCTTCAGCTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: PTSACADSGNSITPRPWGVSKSV*FFSSAT
Trigger: TGTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGAC...CCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433193.2
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCCGACACGTCATAGCTaGCCTTGTACTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADPTRHS*PCTWPG
Trigger: TCCTGGCCAAGTACAAGGCCAGCTATGACGTGTCGG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGTGCACATGTTCCAGCTaGCCTGAGTCCGACACGTCA +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWCTCSS*PESDTS
Trigger: TGACGTGTCGGACTCAGGCCAGCTGGAACATGTGCA...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATTGCACATGTTCCAGCTaGCCTGAGTCCGACACGTCA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADCTCSS*PESDTS
Trigger: TGACGTGTCGGACTCAGGCCAGCTGGAACATGTGCA...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TCGAATCCACCGATGATCAGCAGCGCGTTGATGCTGTGCGTGCGCATCTGTGTGTGCACATGTTCCAGCTaGCCTGAGTCCGACACGTCA +
Preference number: 4 (lower is better)
Translates to: SNPPMISSALMLCVRICVCTCSS*PESDTS
Trigger: TGACGTGTCGGACTCAGGCCAGCTGGAACATGTGCA...CACACAGATGCGCACGCACAGCATCAACGCGCTGCTGATCATCGGTGGATTCGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGACATGCAGGCGGGACTaGGTCAGACACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRTCRRD*VRHSRA
Trigger: AGCCCTGGAGTGTCTGACCCAGTCCCGCCTGCATGT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAACGCACTGGAGCAGGTaGGGCAGATGGGCACTCGCC +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGATHWSR*GRWALA
Trigger: GGCGAGTGCCCATCTGCCCCACCTGCTCCAGTGCGT...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTACAGACAGCACGCACTaGAGCAGGTGGGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGTDSTH*SRWGRW
Trigger: CCATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGT...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTTGATCTGGCCCTTGGCGAAGCCGTCAAAGCCATCATAGATGGCGAGCATCCTACGAAGGTCCTCTGGTaGCTCTGGGCCGTGGTCATG +
Preference number: 4 (lower is better)
Translates to: FDLALGEAVKAIIDGEHPTKVLW*LWAVVM
Trigger: CATGACCACGGCCCAGAGCCACCAGAGGACCTTCGT...AGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTAGAACGAAGGTCCTCTaGTGGCTCTGGGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGRTKVL*WLWAVV
Trigger: GACCACGGCCCAGAGCCACCAGAGGACCTTCGTTCT...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGAGAACGAAGGTCCTCTaGTGGCTCTGGGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRRTKVL*WLWAVV
Trigger: GACCACGGCCCAGAGCCACCAGAGGACCTTCGTTCT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp GCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGCCAGCCTTCCTCTGGTaGAGATTCTGGAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: AQGCPTSACADSGNSITPPAFLW*RFWKEH
Trigger: GTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGG...CGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGCACGTGCCCGAGGATaGTCACACGTGTGTCATAGC +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTARARG*SHVCHS
Trigger: GCTATGACACACGTGTGACCATCCTCGGGCACGTGC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCAGCACGTGCCCGAGGATaGTCACACGTGTGTCATAGC +
Preference number: 4 (lower is better)
Translates to: KVHKGVPRLPALIQETPSARARG*SHVCHS
Trigger: GCTATGACACACGTGTGACCATCCTCGGGCACGTGC...TGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp CAGCAGCCGTGTCTACTCTGGCAGGAGTCTTCCGGAGAGTTCCAACCTAGGTCCCCGATTTCTTTGATCTaGCCCTTGGCGAAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: QQPCLLWQESSGEFQPRSPISLI*PLAKPS
Trigger: TGACGGCTTCGCCAAGGGCCAGATCAAAGAAATCGG...GGACCTAGGTTGGAACTCTCCGGAAGACTCCTGCCAGAGTAGACACGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGGTTTTGTCCCAAGAATaGAGCCTCCTTGGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWVLSQE*SLLGRS
Trigger: GGACCGGCCAAGGAGGCTCCATTCTTGGGACAAAAC...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATTCTCCAGTTGCACGTTaGACACCTTCTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADSPVAR*TPSACL
Trigger: CAGGCAGGCAGAAGGTGTCCAACGTGCAACTGGAGA...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp GAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCACAGCCGTGTCTACTCTaGCAGGAGTCTTCCGGAGAG +
Preference number: 4 (lower is better)
Translates to: EKVHKGVPRLPALIQETPQPCLL*QESSGE
Trigger: CTCTCCGGAAGACTCCTGCCAGAGTAGACACGGCTG...TGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR CAA 72 bp TCTGCCCCGATGCTGAAATCGGAACCCGGCACATTGTaGGACACAGTAGCGGGAACCATGACCATGGGGACA +
Preference number: 4 (lower is better)
Translates to: SAPMLKSEPGTL*DTVAGTMTMGT
Trigger: TGTCCCCATGGTCATGGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTCCGATTTCAGCATCGGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGTGCAGCTCTCATTTCTaGGCACAAGGCCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWCSSHF*AQGLSG
Trigger: TCCAGAGAGGCCTTGTGCTCAGAAATGAGAGCTGCA...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATTGCAGCTCTCATTTCTaGGCACAAGGCCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADCSSHF*AQGLSG
Trigger: TCCAGAGAGGCCTTGTGCTCAGAAATGAGAGCTGCA...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTTGGCTGTCGGACTCTGATATGTTCCAGCTGGCCTaGGTCCGACACGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: EPERKASALALSWLSDSDMFQLA*VRHVIA
Trigger: AGCTATGACGTGTCGGACTCAGGCCAGCTGGAACAT...ATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCACGTTTTCTTTCTCTaGGAACCCAGCCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADHVFFL*EPSPSA
Trigger: AGCGGAAGGGCTGGGTTCTCAGAGAAAGAAAACGTG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381075.7
ENST00000678206.1
CDS-3UTR TCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGTAGCCCTCGTAGATaGAGTACACCTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGGSPRR*STPWPP
Trigger: TGGGGGCCAAGGTGTACTTCATCTACGAGGGCTACC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TTTGATCTGGCCCTTGGCGAAGCCGTCAAAGCCATCATAGATGGCGAGCATCCTGGTAGCCCTCGTAGATaGAGTACACCTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FDLALGEAVKAIIDGEHPGSPRR*STPWPP
Trigger: TGGGGGCCAAGGTGTACTTCATCTACGAGGGCTACC...AGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGCCTCTGCGATGTTTaGGCCTCCGTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAGLCDV*ASVHHA
Trigger: GGCATGGTGGACGGAGGCTCAAACATCGCAGAGGCC...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGCCTTCTGCACATCCTaGGTCATCTGCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRAFCTS*VICTHS
Trigger: GGAGTGCGTGCAGATGACTCAGGATGTGCAGAAGGC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
CDS-3UTR TCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGTGTCTGCCCCGATGCTaGAATCGGAACCCGGCACAT +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRCLPRC*NRNPAH
Trigger: ATGTGCCGGGTTCCGATTTCAGCATCGGGGCAGACA...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp AAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCATGGCTATCAGATTTTTaGACCCACCTCCGCCCCACC +
Preference number: 4 (lower is better)
Translates to: KVHKGVPRLPALIQETPSWLSDF*THLRPT
Trigger: GGTGGGGCGGAGGTGGGTTCAAAAATCTGATAGCCA...TGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCTCTTCGAAAATGTATaGGGCATCAGCTCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTLFENV*GISSGR
Trigger: GCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGCAGCCGTGTCTACTCTGGCAGGAGTCTTCCGGAGAGTTCCAACCTAGGTCCCATTTTCTCCGTCAGGTaGTCCACGTTGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSRVYSGRSLPESSNLGPIFSVR*STLDCR
Trigger: TCTGCAGTCCAACGTGGAGCACCTGACGGAGAAAAT...GGGACCTAGGTTGGAACTCTCCGGAAGACTCCTGCCAGAGTAGACACGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp CTGCTTGATGCGGTCGCAGGTGTCGGTGATAGTGTTCAGGGCGGTGTCTGCCCCAGTCAAACACGCCTTTaGCCTCTTCTGAATACAGCT +
Preference number: 4 (lower is better)
Translates to: LLDAVAGVGDSVQGGVCPSQTRL*PLLNTA
Trigger: AGCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACT...GGGGCAGACACCGCCCTGAACACTATCACCGACACCTGCGACCGCATCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCCAGCACGTTCTTCCTaGAGTCAAACACGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWPARSS*SQTRLC
Trigger: GCAAAGGCGTGTTTGACTGCAGGAAGAACGTGCTGG...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCCAGCACGTTCTTCCTaGAGTCAAACACGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: VHKGVPRLPALIQETPSHPARSS*SQTRLC
Trigger: GCAAAGGCGTGTTTGACTGCAGGAAGAACGTGCTGG...GTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR GCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCCAGCACGTTCTTCCTaGAGTCAAACACGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADPARSS*SQTRLC
Trigger: GCAAAGGCGTGTTTGACTGCAGGAAGAACGTGCTGG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTATCAAATGGAGAGGGTaGCCCACCCTGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTIKWRG*PTLLHV
Trigger: CACATGCAGCAGGGTGGGGCACCCTCTCCATTTGAT...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCAATCAAATGGAGAGGGTaGCCCACCCTGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: KVHKGVPRLPALIQETPSIKWRG*PTLLHV
Trigger: CACATGCAGCAGGGTGGGGCACCCTCTCCATTTGAT...TGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR GCA 90 bp TCCACCCAGCTCTCTGCCCCCATTTCTGAGGCGCAGCTGTTCTCTCTTGCAGACGGCCTCCTTGAGTTTTaGAGTGATCCACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: STQLSAPISEAQLFSLADGLLEF*SDPLHS
Trigger: GCTATGGAGTGGATCACTGCAAAACTCAAGGAGGCC...GTCTGCAAGAGAGAACAGCTGCGCCTCAGAAATGGGGGCAGAGAGCTGGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp CATAGATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGCACAGCTGAGCTCTTTGGGAATCCTGTaGTCAAAATCCGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: HRWRASCGRRQCPRAQLSSLGIL*SKSVCF
Trigger: GAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGA...GCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCAGACACTCCAGGGCTaGACATGTTCCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGQTLQG*TCSSWP
Trigger: AGGCCAGCTGGAACATGTGCAGCCCTGGAGTGTCTG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGCTACGTTGCAATTGGTCTTTGGGATCTGATCATCCGGCAGCTTGATGGCAAGGTGGCTGCAGGCACATaGAGGCGGGACTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SYVAIGLWDLIIRQLDGKVAAGT*RRDWVR
Trigger: TCTGACCCAGTCCCGCCTGCATGTGCCTGCAGCCAC...CTTGCCATCAAGCTGCCGGATGATCAGATCCCAAAGACCAATTGCAACGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GGTCACACGTGTGTCATAGCCCAGCTGCGTGACGACAAGCTCTTTGATTTTCTCAGCCTCCGTCCACCATaGCCTGGTAGCCCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: GHTCVIAQLRDDKLFDFLSLRPP*PGSPRR
Trigger: TCTACGAGGGCTACCAGGGCATGGTGGACGGAGGCT...GAGAAAATCAAAGAGCTTGTCGTCACGCAGCTGGGCTATGACACACGTGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGATCGTCCCGCCCACTTaGAGGATGCTGGAGACACTC +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRIVPPT*RMLETL
Trigger: GAGTGTCTCCAGCATCCTGCAAGTGGGCGGGACGAT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTTCTGAGGCGCAGCTGTTCTCTCTTGCAGACTAGAGCTAAGAGGCAGAAACGCCCTCCTCTCTGCACGTaGCCGAGGATGGTCACACGT +
Preference number: 4 (lower is better)
Translates to: FLRRSCSLLQTRAKRQKRPPLCT*PRMVTR
Trigger: ACGTGTGACCATCCTCGGGCACGTGCAGAGAGGAGG...GCGTTTCTGCCTCTTAGCTCTAGTCTGCAAGAGAGAACAGCTGCGCCTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp CCAGCCGATTTCTTTGATCTGGCCCTTGGCGAAGCCGTCAAAGCCATCATAGATCCTCCTCTCTGCACGTaGCCGAGGATGGTCACACGT +
Preference number: 4 (lower is better)
Translates to: PADFFDLALGEAVKAIIDPPLCT*PRMVTR
Trigger: ACGTGTGACCATCCTCGGGCACGTGCAGAGAGGAGG...ATCTATGATGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCAAGATCCTGTCGAATaGCGAAGGGGTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTQDPVE*RRGPSS
Trigger: AGAGGAGGGACCCCTTCGGCATTCGACAGGATCTTG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AATGAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCTGCCTCCACTCCCATaGGGCTGGCCAAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: NEKVHKGVPRLPALIQETLPPLP*GWPRSC
Trigger: ACAGGATCTTGGCCAGCCGCATGGGAGTGGAGGCAG...AGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp AAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCATGTAGGTGTTCAGGTTaGCCGCAAAGCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KVHKGVPRLPALIQETPSCRCSG*PQSSSL
Trigger: GAGGGAGGAGCTTTGCGGGCAACCTGAACACCTACA...TGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTTGTAGGTGTTCAGGTTaGCCGCAAAGCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTCRCSG*PQSSSL
Trigger: GAGGGAGGAGCTTTGCGGGCAACCTGAACACCTACA...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGGGTTGGGGTGAGTAAGCGCTTGCTTCATCGTTACAGAGCCAGAAAGGAAAGCACACAGAACTCCTCGTaGTTCTCCCGGGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: WVGVSKRLLHRYRARKESTQNSS*FSRAAD
Trigger: GTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGT...GCTTTCCTTTCTGGCTCTGTAACGATGAAGCAAGCGCTTACTCACCCCAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGTTCAGGGCGGTGTCTaGCCCGATGCTGAAATCGGA +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGVQGGV*PDAEIG
Trigger: TCCGATTTCAGCATCGGGGCAGACACCGCCCTGAAC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGTTCCGCTGGCGGACTaGTTGATGCGGTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAVPLAD*LMRSQV
Trigger: CACCTGCGACCGCATCAAGCAGTCCGCCAGCGGAAC...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATGTCCCACGTCTGCCTaGGCTGATTCAGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: EKVHKGVPRLPALIQETPCPTSA*ADSGNS
Trigger: GGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACA...TGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR GCA 90 bp AGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTGCACCACTTGCAGGATaGTGGAGACACTCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SFYQMERVPHPAACDPARAPLAG*WRHSPS
Trigger: ACTGGGAGAGTGTCTCCAGCATCCTGCAAGTGGTGC...ACGTGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR CCA 90 bp GAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTTGGCTGTCGGACTCTGATTGCACATGTTCCAGCTaGCCTGAGTCCGACACGTCA +
Preference number: 4 (lower is better)
Translates to: EPERKASALALSWLSDSDCTCSS*PESDTS
Trigger: TGACGTGTCGGACTCAGGCCAGCTGGAACATGTGCA...ATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp GTCAGGTGCTCCACGTTGGACTGCAGATCCCTGATGTCGAAGGGCTCTTCGAAATGCACATGTTCCAGCTaGCCTGAGTCCGACACGTCA +
Preference number: 4 (lower is better)
Translates to: VRCSTLDCRSLMSKGSSKCTCSS*PESDTS
Trigger: TGACGTGTCGGACTCAGGCCAGCTGGAACATGTGCA...TTTCGAAGAGCCCTTCGACATCAGGGATCTGCAGTCCAACGTGGAGCACCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCCACTTGCAGGATGCTaGAGACACTCTCCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGPLAGC*RHSPSR
Trigger: CCGACTGGGAGAGTGTCTCCAGCATCCTGCAAGTGG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGTCCTCTGGTGGCTCTaGGCCGTGGTCATGATGGCG +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAVLWWL*AVVMMA
Trigger: CGCCATCATGACCACGGCCCAGAGCCACCAGAGGAC...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp AGTAGCGGGAACCATGACCATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGTTGCAATTGGTCTTTaGGATCTGATCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SSGNHDHGDTELLVLLPGVAIGL*DLIIRQ
Trigger: CTGCCGGATGATCAGATCCCAAAGACCAATTGCAAC...GCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCATGGTCATGGTTCCCGCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCAAAGCCATCATAGATaGCGAGCATCCTGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADQSHHR*RASCGR
Trigger: ACGGCCACAGGATGCTCGCCATCTATGATGGCTTTG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCCGATTTCTTTGATCTaGCCCTTGGCGAAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADPISLI*PLAKPS
Trigger: TGACGGCTTCGCCAAGGGCCAGATCAAAGAAATCGG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CATGTTCCAGCTGGCCTGAGTCCGACACGTCATAGCTGGCCTTGTACTTGGCCAGCGTGCGCATCTGTGTaGCGATCTCTTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: HVPAGLSPTRHSWPCTWPACASV*RSLPST
Trigger: AGTACTTGGAAGAGATCGCCACACAGATGCGCACGC...TGGCCAAGTACAAGGCCAGCTATGACGTGTCGGACTCAGGCCAGCTGGAACATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TCTCTCTTGCAGACTAGAGCTAAGAGGCAGAAACGCTGTCCCTACAGGAGGGGGAGGTCCTCTGGTGGCTaGAAGAGAAACAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLQTRAKRQKRCPYRRGRSSGG*KRNRGS
Trigger: GCTCCCTCTGTTTCTCTTCCAGCCACCAGAGGACCT...CCCCCTCCTGTAGGGACAGCGTTTCTGCCTCTTAGCTCTAGTCTGCAAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp CAGCAGCCGTGTCTACTCTGGCAGGAGTCTTCCGGAGAGTTCCAACCTAGGTCCAGAACGAAGGTCCTCTaGTGGCTGGAAGAGAAACAG +
Preference number: 4 (lower is better)
Translates to: QQPCLLWQESSGEFQPRSRTKVL*WLEEKQ
Trigger: CTGTTTCTCTTCCAGCCACCAGAGGACCTTCGTTCT...GGACCTAGGTTGGAACTCTCCGGAAGACTCCTGCCAGAGTAGACACGGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp GGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGCCTTTGCCCTCTTCTaGATACAGCTGGTAAATGAA +
Preference number: 4 (lower is better)
Translates to: GVPRLPALIQETPSHRGPAFALF*IQLVNE
Trigger: TTCATTTACCAGCTGTATTCAGAAGAGGGCAAAGGC...AGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR TCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGGCACATCTGAAAGCATaGGACACACTCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWAHLKA*DTLHRQ
Trigger: CTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGC...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGCACATCTGAAAGCATaGGACACACTCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADAHLKA*DTLHRQ
Trigger: CTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGGCAGAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGGCCTCTGCGATGTTTaGGCCTCCGTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: WQRFWFQSFYQMERVPHPGLCDV*ASVHHA
Trigger: GGCATGGTGGACGGAGGCTCAAACATCGCAGAGGCC...AGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GCTTGCTTCATCGTTACAGAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTGCCTTCTGCACATCCTaGGTCATCTGCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: ACFIVTEPERKASALALSAFCTS*VICTHS
Trigger: GGAGTGCGTGCAGATGACTCAGGATGTGCAGAAGGC...AGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTCTGTAACGATGAAGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGATCATCCGGCAGCTTaGTGGCAAGTCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRDHPAA*WQVACR
Trigger: CCTACAAGCGACTTGCCATCAAGCTGCCGGATGATC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GCTTGCTTCATCGTTACAGAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTCTCTGCCCCCATTTCTaGGGCGCAGCTGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ACFIVTEPERKASALALSLCPHF*GAAVLS
Trigger: AGAGAGAACAGCTGCGCCTCAGAAATGGGGGCAGAG...AGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTCTGTAACGATGAAGCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATATTTTCTCCGTCAGGTaGTCCACGTTGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADIFSVR*STLDCR
Trigger: TCTGCAGTCCAACGTGGAGCACCTGACGGAGAAAAT...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGATTTTCTCCGTCAGGTaGTCCACGTTGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWIFSVR*STLDCR
Trigger: TCTGCAGTCCAACGTGGAGCACCTGACGGAGAAAAT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCCAGCACGTTCTTCCTaGAGTCAAACACGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTPARSS*SQTRLC
Trigger: GCAAAGGCGTGTTTGACTGCAGGAAGAACGTGCTGG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTTGGCTGTCGGACTCTGATCCAGCACGTTCTTCCTaGAGTCAAACACGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: EPERKASALALSWLSDSDPARSS*SQTRLC
Trigger: GCAAAGGCGTGTTTGACTGCAGGAAGAACGTGCTGG...ATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGGCCTCCTTGAGTTTTaGAGTGATCCACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADGLLEF*SDPLHS
Trigger: GCTATGGAGTGGATCACTGCAAAACTCAAGGAGGCC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGTGCTCAAAATCCGTTTaGTTCTTCAGCTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: CPTSACADSGNSITPRPWCSKSV*FFSSAT
Trigger: TGTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGCA...CCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp CCAGCCGATTTCTTTGATCTGGCCCTTGGCGAAGCCGTCAAAGCCATCATAGATCAGACACTCCAGGGCTaGACATGTTCCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PADFFDLALGEAVKAIIDQTLQG*TCSSWP
Trigger: AGGCCAGCTGGAACATGTGCAGCCCTGGAGTGTCTG...ATCTATGATGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCAAGATCCTGTCGAATaGCGAAGGGGTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGQDPVE*RRGPSS
Trigger: AGAGGAGGGACCCCTTCGGCATTCGACAGGATCTTG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AATGAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTAGGGTCCCGGCCTGCTaGTGTGGATGGAAACTGACA +
Preference number: 4 (lower is better)
Translates to: NEKVHKGVPRLPALIQETRVPAC*CGWKLT
Trigger: TGTCAGTTTCCATCCACAGCAGCAGGCCGGGACCCT...AGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp TGGCAGAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTCCCTTGGCCATGGGCTaGCCACTCACCATCTGCACG +
Preference number: 4 (lower is better)
Translates to: WQRFWFQSFYQMERVPHPPLAMG*PLTICT
Trigger: CGTGCAGATGGTGAGTGGGCAGCCCATGGCCAAGGG...AGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR GCA 90 bp TCTCCTCTCGTCCATCGCCTTCTGCACATCCTGAGTCATCTGCACGCACTCCATCCTTACAGCACCACTTaGAGGATGCTGGAGACACTC +
Preference number: 4 (lower is better)
Translates to: SPLVHRLLHILSHLHALHPYSTT*RMLETL
Trigger: GAGTGTCTCCAGCATCCTGCAAGTGGTGCTGTAAGG...ATGGAGTGCGTGCAGATGACTCAGGATGTGCAGAAGGCGATGGACGAGAGGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGGGCCTCTCTGGATGGTaGTCTTCATTTTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWGLSGW*SSFSPS
Trigger: TGACGGAGAAAATGAAGACCACCATCCAGAGAGGCC...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGGCCTCTCTGGATGGTaGTCTTCATTTTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADGLSGW*SSFSPS
Trigger: TGACGGAGAAAATGAAGACCACCATCCAGAGAGGCC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCAAGGCCTCTCTGGATaGTGGTCTTCATTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADQGLSG*WSSFSP
Trigger: CGGAGAAAATGAAGACCACCATCCAGAGAGGCCTTG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ACGTGTGTCATAGCCCAGCTGCGTGACGACAAGCTCTTTGATTTTCTCAGAGGTACAGACAGTCCACGGTaGCTGCAGGCACATGCAGGC +
Preference number: 4 (lower is better)
Translates to: TCVIAQLRDDKLFDFLRGTDSPR*LQAHAG
Trigger: GCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGT...ACCTCTGAGAAAATCAAAGAGCTTGTCGTCACGCAGCTGGGCTATGACACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGAGAAATCATTGTCGATaGAGCCCACCATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWRNHCR*SPPCPP
Trigger: TGGTGGGCATGGTGGGCTCCATCGACAATGATTTCT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATAGAAATCATTGTCGATaGAGCCCACCATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADRNHCR*SPPCPP
Trigger: TGGTGGGCATGGTGGGCTCCATCGACAATGATTTCT...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAACGAAGGTCCTCTGGTaGCTCTGGGCCGTGGTCATG +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGATKVLW*LWAVVM
Trigger: CATGACCACGGCCCAGAGCCACCAGAGGACCTTCGT...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCTCTGGTGGAGATTCTaGAAGGAACACCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGLWWRF*KEHPVR
Trigger: GCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TCCACCCAGCTCTCTGCCCCCATTTCTGAGGCGCAGCTGTTCTCTCTTGCAGACGTTGCAATTGGTCTTTaGGATCTGATCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: STQLSAPISEAQLFSLADVAIGL*DLIIRQ
Trigger: CTGCCGGATGATCAGATCCCAAAGACCAATTGCAAC...GTCTGCAAGAGAGAACAGCTGCGCCTCAGAAATGGGGGCAGAGAGCTGGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCAAAGCCATCATAGATaGCGAGCATCCTGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTQSHHR*RASCGR
Trigger: ACGGCCACAGGATGCTCGCCATCTATGATGGCTTTG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTTGGCTGTCGGACTCTGATGCGTGCGCATCTGTGTaGCGATCTCTTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: EPERKASALALSWLSDSDACASV*RSLPST
Trigger: AGTACTTGGAAGAGATCGCCACACAGATGCGCACGC...ATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp AGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTGCGTGCGCATCTGTGTaGCGATCTCTTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: SFYQMERVPHPAACDPARACASV*RSLPST
Trigger: AGTACTTGGAAGAGATCGCCACACAGATGCGCACGC...ACGTGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AATGAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCCGGCCTGCTGCTGTaGATGGAAACTGACACATGG +
Preference number: 4 (lower is better)
Translates to: NEKVHKGVPRLPALIQETPGLLL*METDTW
Trigger: CCATGTGTCAGTTTCCATCCACAGCAGCAGGCCGGG...AGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGTCCTGAGAAGCAAGTaGGTTGGGGTGAGTAAGCGC +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRVLRSK*VGVSKR
Trigger: GCGCTTACTCACCCCAACCCACTTGCTTCTCAGGAC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp AATGAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTACCGCGGCGGCTGCATaGAAACCGTCTCAAAATCCG +
Preference number: 4 (lower is better)
Translates to: NEKVHKGVPRLPALIQETTAAAA*KPSQNP
Trigger: CGGATTTTGAGACGGTTTCCATGCAGCCGCCGCGGT...AGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433193.2
CDS-3UTR TCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTTGCAGCTCTCATTTCTaGGCACAAGGCCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGCSSHF*AQGLSG
Trigger: TCCAGAGAGGCCTTGTGCTCAGAAATGAGAGCTGCA...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGGTGGCTCTGGGCCGTGGTCATGATGGCGTCGACGACCTCGATGATCCTGTGCAATACAGCTGGTAAATaGAGTCGGTGGTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: WWLWAVVMMASTTSMILCNTAGK*SRWCSF
Trigger: AAAACTACACCACCGACTTCATTTACCAGCTGTATT...GCACAGGATCATCGAGGTCGTCGACGCCATCATGACCACGGCCCAGAGCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR TCA 90 bp TCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTTTTCTTTCTCTaGGAACCCAGCCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SKVSIKWRGCPTLLHVTQHVFFL*EPSPSA
Trigger: AGCGGAAGGGCTGGGTTCTCAGAGAAAGAAAACGTG...CTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR TCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTAGCCCTCGTAGATaGAGTACACCTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAGSPRR*STPWPP
Trigger: TGGGGGCCAAGGTGTACTTCATCTACGAGGGCTACC...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGTTGGCTGTCGGACTCTaGTTTCCCAAACAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWLAVGL*FPKQSL
Trigger: CAAACTCTGTTTGGGAAATCAGAGTCCGACAGCCAA...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTATTTTCTCCGTCAGGTaGTCCACGTTGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTIFSVR*STLDCR
Trigger: TCTGCAGTCCAACGTGGAGCACCTGACGGAGAAAAT...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGTCTTTGGGAATCCTGTaGTCAAAATCCGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VKAIIDGEHPVAVGNAHASLGIL*SKSVCF
Trigger: GAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGA...CGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCACAGACACTCCAGGGCTaGACATGTTCCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAQTLQG*TCSSWP
Trigger: AGGCCAGCTGGAACATGTGCAGCCCTGGAGTGTCTG...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATCGTCCCGCCCACTTaGAGGATGCTGGAGACACTC +
Preference number: 4 (lower is better)
Translates to: EILVPKFLSNGEGAPPCCIVPPT*RMLETL
Trigger: GAGTGTCTCCAGCATCCTGCAAGTGGGCGGGACGAT...GCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTAGTTTGACACACATCTaGTCCTCCCAGCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTSLTHI*SSQPSS
Trigger: AGAGGAAGGCTGGGAGGAGCAGATGTGTGTCAAACT...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTAGTTTGACACACATCTaGTCCTCCCAGCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFYQMERVPHPAACDPARSLTHI*SSQPSS
Trigger: AGAGGAAGGCTGGGAGGAGCAGATGTGTGTCAAACT...ACGTGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CTTGAGCCACCACTGTTCTTTGGGAATCCTGTGCTCAAAATCCGTTTGCTTCTTGTTCCGCTGGCGGACTaGTTGATGCGGTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LEPPLFFGNPVLKIRLLLVPLAD*LMRSQV
Trigger: CACCTGCGACCGCATCAAGCAGTCCGCCAGCGGAAC...AAGAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCCTCTCTGGATGGTaGTCTTCATTTTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTGLSGW*SSFSPS
Trigger: TGACGGAGAAAATGAAGACCACCATCCAGAGAGGCC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCAAGGCCTCTCTGGATaGTGGTCTTCATTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTQGLSG*WSSFSP
Trigger: CGGAGAAAATGAAGACCACCATCCAGAGAGGCCTTG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GCAGTGATCCACTCCATAGCTCTGGCAGAGATTTTGGTTCCAAAGTTTCTATCACGATCTGGCCGTTCCTaGCCAGCTCCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AVIHSIALAEILVPKFLSRSGRS*PAPPAA
Trigger: GGCTGCTGGAGGAGCTGGCCAGGAACGGCCAGATCG...TGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGCTATGGAGTGGATCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCCAGCCTTCCTCTGGTaGAGATTCTGGAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGPAFLW*RFWKEH
Trigger: GTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCCAGCCTTCCTCTGGTaGAGATTCTGGAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRPAFLW*RFWKEH
Trigger: GTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCTCCCAGCCTTCCTCTaGTGGAGATTCTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRLPAFL*WRFWKE
Trigger: TTCCTTCCAGAATCTCCACCAGAGGAAGGCTGGGAG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AGCTACGTTGCAATTGGTCTTTGGGATCTGATCATCCGGCAGCTTGATGGCAAGGCACGTGCCCGAGGATaGTCACACGTGTGTCATAGC +
Preference number: 4 (lower is better)
Translates to: SYVAIGLWDLIIRQLDGKARARG*SHVCHS
Trigger: GCTATGACACACGTGTGACCATCCTCGGGCACGTGC...CTTGCCATCAAGCTGCCGGATGATCAGATCCCAAAGACCAATTGCAACGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGGTTGCAATTGGTCTTTaGGATCTGATCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWVAIGL*DLIIRQ
Trigger: CTGCCGGATGATCAGATCCCAAAGACCAATTGCAAC...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ATCAGCAGCGCGTTGATGCTGTGCGTGCGCATCTGTGTGGCGATCTCTTCCAAGGTTGCAATTGGTCTTTaGGATCTGATCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: ISSALMLCVRICVAISSKVAIGL*DLIIRQ
Trigger: CTGCCGGATGATCAGATCCCAAAGACCAATTGCAAC...CTTGGAAGAGATCGCCACACAGATGCGCACGCACAGCATCAACGCGCTGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CTTGGCGAAGCCGTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCCAGCTACGTTGCAATTaGTCTTTGGGATCTGATCAT +
Preference number: 4 (lower is better)
Translates to: LGEAVKAIIDGEHPVAVGQLRCN*SLGSDH
Trigger: ATGATCAGATCCCAAAGACCAATTGCAACGTAGCTG...GCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCAAAGCCATCATAGATaGCGAGCATCCTGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGQSHHR*RASCGR
Trigger: ACGGCCACAGGATGCTCGCCATCTATGATGGCTTTG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCCGATTTCTTTGATCTaGCCCTTGGCGAAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGPISLI*PLAKPS
Trigger: TGACGGCTTCGCCAAGGGCCAGATCAAAGAAATCGG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACCGATTTCTTTGATCTaGCCCTTGGCGAAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: QSFYQMERVPHPAACDPAPISLI*PLAKPS
Trigger: TGACGGCTTCGCCAAGGGCCAGATCAAAGAAATCGG...TGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCAAGATACCTTCTCTATTaGGCACAGTCGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KVHKGVPRLPALIQETPSRYLLY*AQSAAA
Trigger: AGCAGCTGCCGACTGTGCCCAATAGAGAAGGTATCT...TGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGCCTGTGTGAACTCCTaGCTTTGTTCTCCTTGTATG +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADACVNS*LCSPCM
Trigger: CATACAAGGAGAACAAAGCCAGGAGTTCACACAGGC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGCGCTAGCTCTTTCTTaGCTGTCGGACTCTGATTTC +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTALALS*LSDSDF
Trigger: GAAATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
3UTR CAA 72 bp GTCCTGAGAAGCAAGTGGGTTGGGGTGAGTAAGCGCTaGCTTCATCGTTACAGAGCCAGAAAGGAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VLRSKWVGVSKR*LHRYRARKESL
Trigger: GAGGCTTTCCTTTCTGGCTCTGTAACGATGAAGCAAGCGCTTACTCACCCCAACCCACTTGCTTCTCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGCCTTTGCCCTCTTCTaGATACAGCTGGTAAATGAA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADAFALF*IQLVNE
Trigger: TTCATTTACCAGCTGTATTCAGAAGAGGGCAAAGGC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACGCCTTTGCCCTCTTCTaGATACAGCTGGTAAATGAA +
Preference number: 4 (lower is better)
Translates to: VHKGVPRLPALIQETPSHAFALF*IQLVNE
Trigger: TTCATTTACCAGCTGTATTCAGAAGAGGGCAAAGGC...GTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR TCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAATGTTCCAGCTGGCCTaGGTCCGACACGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAMFQLA*VRHVIA
Trigger: AGCTATGACGTGTCGGACTCAGGCCAGCTGGAACAT...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTAGTCGAACCGCATCTTaGAATCTCCTCTCGTCCATC +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGSRTAS*NLLSSI
Trigger: GATGGACGAGAGGAGATTTCAAGATGCGGTTCGACT...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGATTTTCTCCGTCAGGTaGTCCACGTTGGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRIFSVR*STLDCR
Trigger: TCTGCAGTCCAACGTGGAGCACCTGACGGAGAAAAT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGAGTCAAACACGCCTTTaGCCTCTTCTGAATACAGCT +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWSQTRL*PLLNTA
Trigger: AGCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGCCTCCTTGAGTTTTaGAGTGATCCACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGGLLEF*SDPLHS
Trigger: GCTATGGAGTGGATCACTGCAAAACTCAAGGAGGCC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GGGTGCCCCCACGTTGATGACAGCTACGTTGCAATTGGTCTTTGGGATCTGATCGGCCTCCTTGAGTTTTaGAGTGATCCACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: GCPHVDDSYVAIGLWDLIGLLEF*SDPLHS
Trigger: GCTATGGAGTGGATCACTGCAAAACTCAAGGAGGCC...GATCAGATCCCAAAGACCAATTGCAACGTAGCTGTCATCAACGTGGGGGCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTTTGCTTCTTCAGCTCTaGCACAGGTTGAAAAATAAC +
Preference number: 4 (lower is better)
Translates to: TSACADSGNSITPRPWGSLLLQL*HRLKNN
Trigger: GTTATTTTTCAACCTGTGGCAGAGCTGAAGAAGCAA...ACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR GCA 90 bp TCCTCTGGTGGAGATTCTGGAAGGAACACCCAGTCCGCACCGCAGGCCAAGGCATTGCTTCTTCAGCTCTaGCACAGGTTGAAAAATAAC +
Preference number: 4 (lower is better)
Translates to: SSGGDSGRNTQSAPQAKALLLQL*HRLKNN
Trigger: GTTATTTTTCAACCTGTGGCAGAGCTGAAGAAGCAA...TGCCTTGGCCTGCGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGTGCTCAAAATCCGTTTaGTTCTTCAGCTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWCSKSV*FFSSAT
Trigger: TGTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGCA...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCGCGCTGCAGCAGGTTaGAAGCAGCCTTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCRAAAG*KQPSGG
Trigger: GCCGCCTGAAGGCTGCTTGCAACCTGCTGCAGCGCG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTAGTTTGACACACATCTaGTCCTCCCAGCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGSLTHI*SSQPSS
Trigger: AGAGGAAGGCTGGGAGGAGCAGATGTGTGTCAAACT...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GCGGGAACCATGACCATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTATTTTGGGTATCAATTaGTCCTTCAGCCACAATAAT +
Preference number: 4 (lower is better)
Translates to: AGTMTMGTQNSSCFSRAAILGIN*SFSHNN
Trigger: ATTATTGTGGCTGAAGGAGCAATTGATACCCAAAAT...AGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCATGGTCATGGTTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGGGGTCCCTCCTCTCTaGACGTGCCCGAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCGVPPL*TCPRMV
Trigger: GACCATCCTCGGGCACGTGCAGAGAGGAGGGACCCC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTTTTGCAGTGATCCACTCCATAGCTCTGGCAGAGATTTTGGTTCCAAAGTTTGGGGTCCCTCCTCTCTaGACGTGCCCGAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: SFAVIHSIALAEILVPKFGVPPL*TCPRMV
Trigger: GACCATCCTCGGGCACGTGCAGAGAGGAGGGACCCC...AAACTTTGGAACCAAAATCTCTGCCAGAGCTATGGAGTGGATCACTGCAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCACAAGATCCTGTCGAATaGCGAAGGGGTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAQDPVE*RRGPSS
Trigger: AGAGGAGGGACCCCTTCGGCATTCGACAGGATCTTG...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCATGTAGGTGTTCAGGTTaGCCGCAAAGCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGACRCSG*PQSSSL
Trigger: GAGGGAGGAGCTTTGCGGGCAACCTGAACACCTACA...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCATCCCAGCCGCGGGTaGCCCCACGTTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCHPSRG*PHVDDS
Trigger: GCTGTCATCAACGTGGGGGCACCCGCGGCTGGGATG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACATCCCAGCCGCGGGTaGCCCCACGTTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAHPSRG*PHVDDS
Trigger: GCTGTCATCAACGTGGGGGCACCCGCGGCTGGGATG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCTGTGGCCGTCGGCAATaGCCACGCGCACAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCCGRRQ*PRAQLS
Trigger: GCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACA...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCATGTGGCCGTCGGCAATaGCCACGCGCACAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTACGRRQ*PRAQLS
Trigger: GCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACA...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACCGGCCCCGGAGAGGTaGTCCAGGAACTTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAPAPER*SRNFRK
Trigger: CTTGCGGAAGTTCCTGGAGCACCTCTCCGGGGCCGG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS-3UTR CCA 90 bp CAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCAGGCCTCTCTGGATGGTaGTCTTCATTTTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: QSFYQMERVPHPAACDPAGLSGW*SSFSPS
Trigger: TGACGGAGAAAATGAAGACCACCATCCAGAGAGGCC...TGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCAAGGCCTCTCTGGATaGTGGTCTTCATTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGQGLSG*WSSFSP
Trigger: CGGAGAAAATGAAGACCACCATCCAGAGAGGCCTTG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCAAGGCCTCTCTGGATaGTGGTCTTCATTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRQGLSG*WSSFSP
Trigger: CGGAGAAAATGAAGACCACCATCCAGAGAGGCCTTG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTAAAGTTTCTATCAAATaGAGAGGGTGCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTKVSIK*RGCPTL
Trigger: CAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTT...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCACGTAAAGTTTCTATCAAATaGAGAGGGTGCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: SFYQMERVPHPAACDPARKVSIK*RGCPTL
Trigger: CAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTT...ACGTGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCACCGACACGTCATAGCTaGCCTTGTACTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAPTRHS*PCTWPG
Trigger: TCCTGGCCAAGTACAAGGCCAGCTATGACGTGTCGG...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AGCTACGTTGCAATTGGTCTTTGGGATCTGATCATCCGGCAGCTTGATGGCAAGCCGACACGTCATAGCTaGCCTTGTACTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SYVAIGLWDLIIRQLDGKPTRHS*PCTWPG
Trigger: TCCTGGCCAAGTACAAGGCCAGCTATGACGTGTCGG...CTTGCCATCAAGCTGCCGGATGATCAGATCCCAAAGACCAATTGCAACGTAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCACGCACTGGAGCAGGTaGGGCAGATGGGCACTCGCC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCTHWSR*GRWALA
Trigger: GGCGAGTGCCCATCTGCCCCACCTGCTCCAGTGCGT...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCGATCTGGCCGTTCCTaGCCAGCTCCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCRSGRS*PAPPAA
Trigger: GGCTGCTGGAGGAGCTGGCCAGGAACGGCCAGATCG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTAGAAATCATTGTCGATaGAGCCCACCATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGRNHCR*SPPCPP
Trigger: TGGTGGGCATGGTGGGCTCCATCGACAATGATTTCT...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR CCA 90 bp TTTGATCTGGCCCTTGGCGAAGCCGTCAAAGCCATCATAGATGGCGAGCATCCTAGAAATCATTGTCGATaGAGCCCACCATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: FDLALGEAVKAIIDGEHPRNHCR*SPPCPP
Trigger: TGGTGGGCATGGTGGGCTCCATCGACAATGATTTCT...AGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR CCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCACTCTGGTGGAGATTCTaGAAGGAACACCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGALWWRF*KEHPVR
Trigger: GCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAG...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GGTCACACGTGTGTCATAGCCCAGCTGCGTGACGACAAGCTCTTTGATTTTCTCCCAGCCTTCCTCTGGTaGAGATTCTGGAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: GHTCVIAQLRDDKLFDFLPAFLW*RFWKEH
Trigger: GTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGG...GAGAAAATCAAAGAGCTTGTCGTCACGCAGCTGGGCTATGACACACGTGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGGCAGGCGCACGGCGTaGTTCCCGTTCAGTGACACG +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAGRRTA*FPFSDT
Trigger: CGTGTCACTGAACGGGAACCACGCCGTGCGCCTGCC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CCAGCCGATTTCTTTGATCTGGCCCTTGGCGAAGCCGTCAAAGCCATCATAGATCAAAGCCATCATAGATaGCGAGCATCCTGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PADFFDLALGEAVKAIIDQSHHR*RASCGR
Trigger: ACGGCCACAGGATGCTCGCCATCTATGATGGCTTTG...ATCTATGATGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCGTTTTGTCCCAAGAATaGAGCCTCCTTGGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: EILVPKFLSNGEGAPPCCVLSQE*SLLGRS
Trigger: GGACCGGCCAAGGAGGCTCCATTCTTGGGACAAAAC...GCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCTCTGGTGGCGTTCCTaGCCAGCTCCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCLWWRS*PAPPAA
Trigger: GGCTGCTGGAGGAGCTGGCCAGGAACGCCACCAGAG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR TCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCATGCAGCTCTCATTTCTaGGCACAAGGCCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGACSSHF*AQGLSG
Trigger: TCCAGAGAGGCCTTGTGCTCAGAAATGAGAGCTGCA...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp AATGAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTGCACATCTGAAAGCATaGGACACACTCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: NEKVHKGVPRLPALIQETAHLKA*DTLHRQ
Trigger: CTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGC...AGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGCTCATATGCACATCTaGAAGCATGAGACACACTCC +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGAHMHI*KHETHS
Trigger: GGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGCTCATATGCACATCTaGAAGCATGAGACACACTCC +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRAHMHI*KHETHS
Trigger: GGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGGCCTCTGCGATGTTTaGGCCTCCGTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAGLCDV*ASVHHA
Trigger: GGCATGGTGGACGGAGGCTCAAACATCGCAGAGGCC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCACCGCGCACTGCCAATaGTCGTCCCGCCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCTAHCQ*SSRPLA
Trigger: TGCAAGTGGGCGGGACGATCATTGGCAGTGCGCGGT...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCATCTGGGCCGTGGTCATaGTGGCGTCGACGACCTCGA +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTASGPWS*WRRRPR
Trigger: TCGAGGTCGTCGACGCCATCATGACCACGGCCCAGA...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR TCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGCAGCGTTCATACCTTaGGCATCCCCGCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCAAFIP*ASPPLV
Trigger: GACCAGCGGCGGGGATGCTCAAGGTATGAACGCTGC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTAGTCAAACACGCCTTTaGCCTCTTCTGAATACAGCT +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTSQTRL*PLLNTA
Trigger: AGCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACT...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCACCAGCACGTTCTTCCTaGAGTCAAACACGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAPARSS*SQTRLC
Trigger: GCAAAGGCGTGTTTGACTGCAGGAAGAACGTGCTGG...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTTGCTCAAAATCCGTTTaGTTCTTCAGCTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTCSKSV*FFSSAT
Trigger: TGTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGCA...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGTCTTTGGGAATCCTGTaGTCAAAATCCGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWSLGIL*SKSVCF
Trigger: GAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGA...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGTGGCTGCAGGCACATaGAGGCGGGACTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCVAAGT*RRDWVR
Trigger: TCTGACCCAGTCCCGCCTGCATGTGCCTGCAGCCAC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAACAGTCCACGGTGGCTaGAGGCACATGCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTATVHGG*RHMQAG
Trigger: TCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCACAGTCCACGGTGGCTaGAGGCACATGCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCTVHGG*RHMQAG
Trigger: TCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGT...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ATGCCGAAGGGGTCCCTCCTCTCTGCACGTGCCCGAGGATGGTCACACGTGTGTTTAATTCTGCTCATATaGACATCTGAAAGCATGAGA +
Preference number: 4 (lower is better)
Translates to: MPKGSLLSARARGWSHVCLILLI*TSESMR
Trigger: TCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA...ACACACGTGTGACCATCCTCGGGCACGTGCAGAGAGGAGGGACCCCTTCGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACCACGTAGATACCCATaGGCACCACGGCACGGACGG +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAPRRYP*APRHGR
Trigger: CCGTCCGTGCCGTGGTGCGCATGGGTATCTACGTGG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAAGTTTGACACACATCTaGTCCTCCCAGCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FQSFYQMERVPHPAACDPSLTHI*SSQPSS
Trigger: AGAGGAAGGCTGGGAGGAGCAGATGTGTGTCAAACT...TGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGTTCCGCTGGCGGACTaGTTGATGCGGTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCVPLAD*LMRSQV
Trigger: CACCTGCGACCGCATCAAGCAGTCCGCCAGCGGAAC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGTTCCGCTGGCGGACTaGTTGATGCGGTCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAVPLAD*LMRSQV
Trigger: CACCTGCGACCGCATCAAGCAGTCCGCCAGCGGAAC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGAAAGTTTCTATCAAATaGAGAGGGTGCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRKVSIK*RGCPTL
Trigger: CAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTGTCCTCTGGCAGAGATTTTaGTTCCAAAGTTTCTATCAA +
Preference number: 4 (lower is better)
Translates to: SACADSGNSITPRPWGSVLWQRF*FQSFYQ
Trigger: TTGATAGAAACTTTGGAACCAAAATCTCTGCCAGAG...GACACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR CCA 90 bp GATTTTCTCAGAGGTGATGGGTTTATTTTGGGTATCAATTGCTCCTTCAGCCACGTCCTCTGGTGGCTCTaGGCCGTGGTCATGATGGCG +
Preference number: 4 (lower is better)
Translates to: DFLRGDGFILGINCSFSHVLWWL*AVVMMA
Trigger: CGCCATCATGACCACGGCCCAGAGCCACCAGAGGAC...GTGGCTGAAGGAGCAATTGATACCCAAAATAAACCCATCACCTCTGAGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR CCA 90 bp ACGTGTGTCATAGCCCAGCTGCGTGACGACAAGCTCTTTGATTTTCTCAGAGGTCTCCCAGCCTTCCTCTaGTGGAGATTCTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: TCVIAQLRDDKLFDFLRGLPAFL*WRFWKE
Trigger: TTCCTTCCAGAATCTCCACCAGAGGAAGGCTGGGAG...ACCTCTGAGAAAATCAAAGAGCTTGTCGTCACGCAGCTGGGCTATGACACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAATGGCGAGCATCCTGTaGCCGTCGGCAATGCCCACG +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAMASIL*PSAMPT
Trigger: CGTGGGCATTGCCGACGGCCACAGGATGCTCGCCAT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGCGTGCGCATCTGTGTaGCGATCTCTTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAACASV*RSLPST
Trigger: AGTACTTGGAAGAGATCGCCACACAGATGCGCACGC...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATAATACAGCTGGTAAATaGAGTCGGTGGTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADNTAGK*SRWCSF
Trigger: AAAACTACACCACCGACTTCATTTACCAGCTGTATT...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGCCTTTGCCCTCTTCTaGATACAGCTGGTAAATGAA +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGAFALF*IQLVNE
Trigger: TTCATTTACCAGCTGTATTCAGAAGAGGGCAAAGGC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TTTGATCTGGCCCTTGGCGAAGCCGTCAAAGCCATCATAGATGGCGAGCATCCTGCCTTTGCCCTCTTCTaGATACAGCTGGTAAATGAA +
Preference number: 4 (lower is better)
Translates to: FDLALGEAVKAIIDGEHPAFALF*IQLVNE
Trigger: TTCATTTACCAGCTGTATTCAGAAGAGGGCAAAGGC...AGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCAGCCTTTGCCCTCTTCTaGATACAGCTGGTAAATGAA +
Preference number: 4 (lower is better)
Translates to: QSFYQMERVPHPAACDPAAFALF*IQLVNE
Trigger: TTCATTTACCAGCTGTATTCAGAAGAGGGCAAAGGC...TGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCCTCTAGCAAGGCGATaGCTGCCTCCACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCPLARR*LPPLPC
Trigger: GCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGTGGTTCCCGTTCAGTaGCACGACGCAAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCVVPVQ*HDASWG
Trigger: ACCCCAGCTTGCGTCGTGTCACTGAACGGGAACCAC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp AATGAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTGCTGTGGATGGAAACTaGCACATGGCAGATATGGAA +
Preference number: 4 (lower is better)
Translates to: NEKVHKGVPRLPALIQETAVDGN*HMADME
Trigger: TTCCATATCTGCCATGTGTCAGTTTCCATCCACAGC...AGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp TGGCAGAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCCTTCTGCACATCCTaGGTCTCCTTCTCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: WQRFWFQSFYQMERVPHPAFCTS*VSFSER
Trigger: CCTTTCTGAGAAGGAGACTCAGGATGTGCAGAAGGC...AGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR GCA 90 bp ACGTGTGTCATAGCCCAGCTGCGTGACGACAAGCTCTTTGATTTTCTCAGAGGTGGCCTCCTTGAGTTTTaGAGTGATCCACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: TCVIAQLRDDKLFDFLRGGLLEF*SDPLHS
Trigger: GCTATGGAGTGGATCACTGCAAAACTCAAGGAGGCC...ACCTCTGAGAAAATCAAAGAGCTTGTCGTCACGCAGCTGGGCTATGACACACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATTTGCTTCTTCAGCTCTaGCACAGGTTGAAAAATAAC +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADLLLQL*HRLKNN
Trigger: GTTATTTTTCAACCTGTGGCAGAGCTGAAGAAGCAA...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GGGTGCCCCCACGTTGATGACAGCTACGTTGCAATTGGTCTTTGGGATCTGATCTGCTCAAAATCCGTTTaGTTCTTCAGCTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: GCPHVDDSYVAIGLWDLICSKSV*FFSSAT
Trigger: TGTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGCA...GATCAGATCCCAAAGACCAATTGCAACGTAGCTGTCATCAACGTGGGGGCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAGCCAGAAAGGAAAGCCTCCGCGCTAGCTCTTTCTTGGCTGTCGGACTCTGATTCTTTGGGAATCCTGTaGTCAAAATCCGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: EPERKASALALSWLSDSDSLGIL*SKSVCF
Trigger: GAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGA...ATCAGAGTCCGACAGCCAAGAAAGAGCTAGCGCGGAGGCTTTCCTTTCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCAGCCTCCGTCCACCATaGCCTGGTAGCCCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCSLRPP*PGSPRR
Trigger: TCTACGAGGGCTACCAGGGCATGGTGGACGGAGGCT...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GATTTTCTCAGAGGTGATGGGTTTATTTTGGGTATCAATTGCTCCTTCAGCCACCTGCCTCCACTCCCATaGGGCTGGCCAAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: DFLRGDGFILGINCSFSHLPPLP*GWPRSC
Trigger: ACAGGATCTTGGCCAGCCGCATGGGAGTGGAGGCAG...GTGGCTGAAGGAGCAATTGATACCCAAAATAAACCCATCACCTCTGAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCAGCGCGTTGATGCTGTaGGTGCGCATCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCSALML*VRICVA
Trigger: CGCCACACAGATGCGCACGCACAGCATCAACGCGCT...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAACACAGAACTCCTCGTaGTTCTCCCGGGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTATQNSS*FSRAAD
Trigger: GTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGCCTTTCCACGCATCTaGGGCAGGAGGAACCGGGAA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCAFPRI*GRRNRE
Trigger: TTCCCGGTTCCTCCTGCCGCAGATGCGTGGAAAGGC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676796.1
CDS-3UTR CCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCACAAGGCCTCTCTGGATaGTGGTCTTCATTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAQGLSG*WSSFSP
Trigger: CGGAGAAAATGAAGACCACCATCCAGAGAGGCCTTG...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TCCCTGATGTCGAAGGGCTCTTCGAAAATGTATGCGGCATCAGCTCCGGCCGCGCTCTGGCAGAGATTTTaGTTCCAAAGTTTCTATCAA +
Preference number: 4 (lower is better)
Translates to: SLMSKGSSKMYAASAPAALWQRF*FQSFYQ
Trigger: TTGATAGAAACTTTGGAACCAAAATCTCTGCCAGAG...CGCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAGCCCTTCGACATCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCACATGCAGGCGGGACTaGGTCAGACACTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCTCRRD*VRHSRA
Trigger: AGCCCTGGAGTGTCTGACCCAGTCCCGCCTGCATGT...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAACAGACAGTCCACGGTaGCTGCAGGCACATGCAGGC +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTATDSPR*LQAHAG
Trigger: GCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCAGCTACGTTGCAATTaGTCTTTGGGATCTGATCAT +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTQLRCN*SLGSDH
Trigger: ATGATCAGATCCCAAAGACCAATTGCAACGTAGCTG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
3UTR CAA 72 bp TTCATGAGGGGCCGTAGCTTGAGCCACCACTGTTCTTaGGGAATCCTGTGCTCAAAATCCGTTTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FMRGRSLSHHCS*GILCSKSVCFF
Trigger: GAAGAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCTCAAGCTACGGCCCCTCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACCATGCCCACCACGTTaGGGTAGGCGTACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAPCPPR*GRRTSA
Trigger: TGCAGAAGTACGCCTACCTCAACGTGGTGGGCATGG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR TCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCCATGCCCACCACGTTaGGGTAGGCGTACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCPCPPR*GRRTSA
Trigger: TGCAGAAGTACGCCTACCTCAACGTGGTGGGCATGG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
CDS-3UTR TCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGCCTTCTGCACATCCTaGGTCATCTGCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAAFCTS*VICTHS
Trigger: GGAGTGCGTGCAGATGACTCAGGATGTGCAGAAGGC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
CDS-3UTR TCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCTGTCTGCCCCGATGCTaGAATCGGAACCCGGCACAT +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCCLPRC*NRNPAH
Trigger: ATGTGCCGGGTTCCGATTTCAGCATCGGGGCAGACA...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp GTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACAAAACAGAAGTAAAATaGAAAGGTGCACAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VHKGVPRLPALIQETPSHKTEVK*KGAQGC
Trigger: ACACCCTTGTGCACCTTTTCATTTTACTTCTGTTTT...GTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR GCA 90 bp AATGAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTAGTCAAACACGCCTTTaGCCTCTTCTGAATACAGCT +
Preference number: 4 (lower is better)
Translates to: NEKVHKGVPRLPALIQETSQTRL*PLLNTA
Trigger: AGCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACT...AGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGTCTTTGGGAATCCTGTaGTCAAAATCCGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRSLGIL*SKSVCF
Trigger: GAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGA...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCCCACTTGCAGGATaGTGGAGACACTCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTARPLAG*WRHSPS
Trigger: ACTGGGAGAGTGTCTCCAGCATCCTGCAAGTGGGCG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCATCGTCCCGCCCACTTaGAGGATGCTGGAGACACTC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCIVPPT*RMLETL
Trigger: GAGTGTCTCCAGCATCCTGCAAGTGGGCGGGACGAT...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GCAGTGATCCACTCCATAGCTCTGGCAGAGATTTTGGTTCCAAAGTTTCTATCATGTAGGTGTTCAGGTTaGCCGCAAAGCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AVIHSIALAEILVPKFLSCRCSG*PQSSSL
Trigger: GAGGGAGGAGCTTTGCGGGCAACCTGAACACCTACA...TGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGCTATGGAGTGGATCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGTTCAGGGCGGTGTCTaGCCCGATGCTGAAATCGGA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCVQGGV*PDAEIG
Trigger: TCCGATTTCAGCATCGGGGCAGACACCGCCCTGAAC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGTTCAGGGCGGTGTCTaGCCCGATGCTGAAATCGGA +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAVQGGV*PDAEIG
Trigger: TCCGATTTCAGCATCGGGGCAGACACCGCCCTGAAC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGCTGTGGATGGAAACTGACACATGGCAGATATGGAATGGTGAGTAAACGTGGCCAAGGCCTCTCTGGATaGTGGTCTTCATTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: CCGWKLTHGRYGMVSKRGQGLSG*WSSFSP
Trigger: CGGAGAAAATGAAGACCACCATCCAGAGAGGCCTTG...GCCACGTTTACTCACCATTCCATATCTGCCATGTGTCAGTTTCCATCCACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAAAAGTTTCTATCAAATaGAGAGGGTGCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAKVSIK*RGCPTL
Trigger: CAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTT...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCTCTGGCAGAGATTTTaGTTCCAAAGTTTCTATCAA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADLWQRF*FQSFYQ
Trigger: TTGATAGAAACTTTGGAACCAAAATCTCTGCCAGAG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCTCTGGCAGAGATTTTaGTTCCAAAGTTTCTATCAA +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWLWQRF*FQSFYQ
Trigger: TTGATAGAAACTTTGGAACCAAAATCTCTGCCAGAG...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CATGTTCCAGCTGGCCTGAGTCCGACACGTCATAGCTGGCCTTGTACTTGGCCACTCTGGCAGAGATTTTaGTTCCAAAGTTTCTATCAA +
Preference number: 4 (lower is better)
Translates to: HVPAGLSPTRHSWPCTWPLWQRF*FQSFYQ
Trigger: TTGATAGAAACTTTGGAACCAAAATCTCTGCCAGAG...TGGCCAAGTACAAGGCCAGCTATGACGTGTCGGACTCAGGCCAGCTGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACCACTTGCAGGATGCTaGAGACACTCTCCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAPLAGC*RHSPSR
Trigger: CCGACTGGGAGAGTGTCTCCAGCATCCTGCAAGTGG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCCACTTGCAGGATGCTaGAGACACTCTCCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCPLAGC*RHSPSR
Trigger: CCGACTGGGAGAGTGTCTCCAGCATCCTGCAAGTGG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGTGATGGGTTTATTTTaGGTATCAATTGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ESMRHTPQTARTGAGGADVMGLF*VSIAPS
Trigger: TGAAGGAGCAATTGATACCCAAAATAAACCCATCAC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGCACGTGCCCGAGGATaGTCACACGTGTGTCATAGC +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAARARG*SHVCHS
Trigger: GCTATGACACACGTGTGACCATCCTCGGGCACGTGC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AGTTTTGCAGTGATCCACTCCATAGCTCTGGCAGAGATTTTGGTTCCAAAGTTTGCACGTGCCCGAGGATaGTCACACGTGTGTCATAGC +
Preference number: 4 (lower is better)
Translates to: SFAVIHSIALAEILVPKFARARG*SHVCHS
Trigger: GCTATGACACACGTGTGACCATCCTCGGGCACGTGC...AAACTTTGGAACCAAAATCTCTGCCAGAGCTATGGAGTGGATCACTGCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCAGCTACGTTGCAATTaGTCTTTGGGATCTGATCAT +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGQLRCN*SLGSDH
Trigger: ATGATCAGATCCCAAAGACCAATTGCAACGTAGCTG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CTTGAGCCACCACTGTTCTTTGGGAATCCTGTGCTCAAAATCCGTTTGCTTCTTCCGATTTCTTTGATCTaGCCCTTGGCGAAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LEPPLFFGNPVLKIRLLLPISLI*PLAKPS
Trigger: TGACGGCTTCGCCAAGGGCCAGATCAAAGAAATCGG...AAGAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTAATACAGCTGGTAAATaGAGTCGGTGGTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGNTAGK*SRWCSF
Trigger: AAAACTACACCACCGACTTCATTTACCAGCTGTATT...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAATGTTCCAGCTGGCCTaGGTCCGACACGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAMFQLA*VRHVIA
Trigger: AGCTATGACGTGTCGGACTCAGGCCAGCTGGAACAT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGGTTCTCCGAGAGTTTaGCACACATCTGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCGSPRV*HTSAPP
Trigger: GGGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGATCATCCGGCAGCTTaGTGGCAAGTCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCDHPAA*WQVACR
Trigger: CCTACAAGCGACTTGCCATCAAGCTGCCGGATGATC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACTCTTCGAAAATGTATaGGGCATCAGCTCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTALFENV*GISSGR
Trigger: GCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GATTTTCTCAGAGGTGATGGGTTTATTTTGGGTATCAATTGCTCCTTCAGCCACCTCTTCGAAAATGTATaGGGCATCAGCTCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: DFLRGDGFILGINCSFSHLFENV*GISSGR
Trigger: GCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAG...GTGGCTGAAGGAGCAATTGATACCCAAAATAAACCCATCACCTCTGAGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAAGTCAAACACGCCTTTaGCCTCTTCTGAATACAGCT +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGASQTRL*PLLNTA
Trigger: AGCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACT...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAATCAAATGGAGAGGGTaGCCCACCCTGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAIKWRG*PTLLHV
Trigger: CACATGCAGCAGGGTGGGGCACCCTCTCCATTTGAT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGATTTTGGGTATCAATTaGTCCTTCAGCCACAATAAT +
Preference number: 4 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWILGIN*SFSHNN
Trigger: ATTATTGTGGCTGAAGGAGCAATTGATACCCAAAAT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCATGTAGGTGTTCAGGTTaGCCGCAAAGCTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTACRCSG*PQSSSL
Trigger: GAGGGAGGAGCTTTGCGGGCAACCTGAACACCTACA...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCTGCACATGTTCCAGCTaGCCTGAGTCCGACACGTCA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCCTCSS*PESDTS
Trigger: TGACGTGTCGGACTCAGGCCAGCTGGAACATGTGCA...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCTCTGGTGGAGATTCTaGAAGGAACACCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCLWWRF*KEHPVR
Trigger: GCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGTGATGGGTTTATTTTaGGTATCAATTGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTVMGLF*VSIAPS
Trigger: TGAAGGAGCAATTGATACCCAAAATAAACCCATCAC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGTTTTGTCCCAAGAATaGAGCCTCCTTGGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAVLSQE*SLLGRS
Trigger: GGACCGGCCAAGGAGGCTCCATTCTTGGGACAAAAC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGTTTTGTCCCAAGAATaGAGCCTCCTTGGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCVLSQE*SLLGRS
Trigger: GGACCGGCCAAGGAGGCTCCATTCTTGGGACAAAAC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp GAAAAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCAAAAACAGAGGACTGTTaGAGTCATAGGCAAATGTTT +
Preference number: 4 (lower is better)
Translates to: EKVHKGVPRLPALIQETPKTEDC*SHRQMF
Trigger: AAACATTTGCCTATGACTCCAACAGTCCTCTGTTTT...TGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTTTAATTCTGCTCATATaGACATCTGAAAGCATGAGA +
Preference number: 4 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTLILLI*TSESMR
Trigger: TCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCTCTGGCAGAGATTTTaGTTCCAAAGTTTCTATCAA +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGLWQRF*FQSFYQ
Trigger: TTGATAGAAACTTTGGAACCAAAATCTCTGCCAGAG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACTCCCAGCCTTCCTCTaGTGGAGATTCTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTALPAFL*WRFWKE
Trigger: TTCCTTCCAGAATCTCCACCAGAGGAAGGCTGGGAG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGTGATGGGTTTATTTTaGGTATCAATTGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CTSESMRHTPQTARTGAGVMGLF*VSIAPS
Trigger: TGAAGGAGCAATTGATACCCAAAATAAACCCATCAC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACAAAGCCATCATAGATaGCGAGCATCCTGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAQSHHR*RASCGR
Trigger: ACGGCCACAGGATGCTCGCCATCTATGATGGCTTTG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCCGATTTCTTTGATCTaGCCCTTGGCGAAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCPISLI*PLAKPS
Trigger: TGACGGCTTCGCCAAGGGCCAGATCAAAGAAATCGG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGCGTGCGCATCTGTGTaGCGATCTCTTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCACASV*RSLPST
Trigger: AGTACTTGGAAGAGATCGCCACACAGATGCGCACGC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAACGAAGGTCCTCTGGTaGCTGGAAGAGAAACAGAGG +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTATKVLW*LEEKQR
Trigger: CCTCTGTTTCTCTTCCAGCCACCAGAGGACCTTCGT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR TCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGCACATCTGAAAGCATaGGACACACTCCACAGACAG +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCAHLKA*DTLHRQ
Trigger: CTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCAGTCGAACCGCATCTTaGAATCTCCTCTCGTCCATC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCSRTAS*NLLSSI
Trigger: GATGGACGAGAGGAGATTTCAAGATGCGGTTCGACT...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TGCTGTGGATGGAAACTGACACATGGCAGATATGGAATGGTGAGTAAACGTGGCTTTGTTCTCCTTGTATaGCGTGTGCATAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: CCGWKLTHGRYGMVSKRGFVLLV*RVHSSV
Trigger: CACTGAACTATGCACACGTCATACAAGGAGAACAAA...GCCACGTTTACTCACCATTCCATATCTGCCATGTGTCAGTTTCCATCCACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAAGTTTGACACACATCTaGTCCTCCCAGCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTASLTHI*SSQPSS
Trigger: AGAGGAAGGCTGGGAGGAGCAGATGTGTGTCAAACT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGATTTTGGGTATCAATTaGTCCTTCAGCCACAATAAT +
Preference number: 4 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRILGIN*SFSHNN
Trigger: ATTATTGTGGCTGAAGGAGCAATTGATACCCAAAAT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGATTTTGGGTATCAATTaGTCCTTCAGCCACAATAAT +
Preference number: 4 (lower is better)
Translates to: SKVSIKWRGCPTLLHVTQILGIN*SFSHNN
Trigger: ATTATTGTGGCTGAAGGAGCAATTGATACCCAAAAT...CTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGCAGCTGTTCTCTCTTaGAGACTAGAGCTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAAAVLS*RLELRG
Trigger: GCCTCTTAGCTCTAGTCTGCAAGAGAGAACAGCTGC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGGCCTCTCTGGATGGTaGTCTTCATTTTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAGLSGW*SSFSPS
Trigger: TGACGGAGAAAATGAAGACCACCATCCAGAGAGGCC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
3UTR CAA 72 bp TTTGCAGTGATCCACTCCATAGCTCTGGCAGAGATTTaGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: FAVIHSIALAEI*VPKFLSNGEGA
Trigger: GGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGCTATGGAGTGGATCACTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGTGATGGGTTTATTTTaGGTATCAATTGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAVMGLF*VSIAPS
Trigger: TGAAGGAGCAATTGATACCCAAAATAAACCCATCAC...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp ACGTGTGTCATAGCCCAGCTGCGTGACGACAAGCTCTTTGATTTTCTCAGAGGTGTGATGGGTTTATTTTaGGTATCAATTGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TCVIAQLRDDKLFDFLRGVMGLF*VSIAPS
Trigger: TGAAGGAGCAATTGATACCCAAAATAAACCCATCAC...ACCTCTGAGAAAATCAAAGAGCTTGTCGTCACGCAGCTGGGCTATGACACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGTTGCAATTGGTCTTTaGGATCTGATCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAVAIGL*DLIIRQ
Trigger: CTGCCGGATGATCAGATCCCAAAGACCAATTGCAAC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGCCTTTGCCCTCTTCTaGATACAGCTGGTAAATGAA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCAFALF*IQLVNE
Trigger: TTCATTTACCAGCTGTATTCAGAAGAGGGCAAAGGC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAAGTCAAACACGCCTTTaGCCTCTTCTGAATACAGCT +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTASQTRL*PLLNTA
Trigger: AGCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCATGCTCAAAATCCGTTTaGTTCTTCAGCTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTACSKSV*FFSSAT
Trigger: TGTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGCA...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp GAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCTTAATTCTGCTCATATaGACATCTGAAAGCATGAGA +
Preference number: 4 (lower is better)
Translates to: EILVPKFLSNGEGAPPCCLILLI*TSESMR
Trigger: TCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA...GCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAATTTTGGGTATCAATTaGTCCTTCAGCCACAATAAT +
Preference number: 4 (lower is better)
Translates to: ICTSESMRHTPQTARTGAILGIN*SFSHNN
Trigger: ATTATTGTGGCTGAAGGAGCAATTGATACCCAAAAT...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
3UTR CAA 72 bp CACCCACCCCTTGGTGGTTTTAACATGCAGCTAGGATaGCAATCAAGAGGACAAGTAACTAAGATTCATGTT +
Preference number: 4 (lower is better)
Translates to: HPPLGGFNMQLG*QSRGQVTKIHV
Trigger: AACATGAATCTTAGTTACTTGTCCTCTTGATTGCAATCCTAGCTGCATGTTAAAACCACCAAGGGGTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCTCTTTGGGAATCCTGTaGTCAAAATCCGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCSLGIL*SKSVCF
Trigger: GAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGA...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCAGCTACGTTGCAATTaGTCTTTGGGATCTGATCAT +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCQLRCN*SLGSDH
Trigger: ATGATCAGATCCCAAAGACCAATTGCAACGTAGCTG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCTTGCTTCTTCAGCTCTaGCACAGGTTGAAAAATAAC +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCLLLQL*HRLKNN
Trigger: GTTATTTTTCAACCTGTGGCAGAGCTGAAGAAGCAA...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR TCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAAAAACAGAAGTAAAATaGAAAGGTGCACAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAKTEVK*KGAQGC
Trigger: ACACCCTTGTGCACCTTTTCATTTTACTTCTGTTTT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGTGATGGGTTTATTTTaGGTATCAATTGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCVMGLF*VSIAPS
Trigger: TGAAGGAGCAATTGATACCCAAAATAAACCCATCAC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCATTAATTCTGCTCATATaGACATCTGAAAGCATGAGA +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTALILLI*TSESMR
Trigger: TCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCTTAATTCTGCTCATATaGACATCTGAAAGCATGAGA +
Preference number: 4 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCLILLI*TSESMR
Trigger: TCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR GCA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAATTTTGGGTATCAATTaGTCCTTCAGCCACAATAAT +
Preference number: 4 (lower is better)
Translates to: LILLICTSESMRHTPQTAILGIN*SFSHNN
Trigger: ATTATTGTGGCTGAAGGAGCAATTGATACCCAAAAT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS CCA 90 bp ACTTCCGCAAGGAGCCCTTGGGGGCCCGGGAGTCGTCCGCGTCCATaGCGAGGAGGCCGAGGGGAGCCGCACGTCCGGGTGCGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TSARSPWGPGSRPRP*RGGRGEPHVRVRSR
Trigger: CCTGCTGCGCACCCGGACGTGCGGCTCCCCTCGGCCTCCTCGCCATGGACGCGGACGACTCCCGGGCCCCCAAGGGCTCCTTGCGGAAGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS CCA 90 bp TGCCGGCCCCGGAGAGGTGCTCCAGGAACTTCCGCAAGGAGCCCTTaGGGGCCCGGGAGTCGTCCGCGTCCATGGCGAGGAGGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: CRPRRGAPGTSARSP*GPGSRPRPWRGGRG
Trigger: CCCTCGGCCTCCTCGCCATGGACGCGGACGACTCCCGGGCCCCCAAGGGCTCCTTGCGGAAGTTCCTGGAGCACCTCTCCGGGGCCGGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS CCA 90 bp CACTCCATCATCCGGGCACCGGCGCCCCCACGTGCACCCGGGGCCTaGGGCGCGCCGAGTCTCCGCCACCTTCCGCTCTTCAATGTTAAA +
Preference number: 5 (lower is better)
Translates to: HSIIRAPAPPRAPGA*GAPSLRHLPLFNVK
Trigger: TTTAACATTGAAGAGCGGAAGGTGGCGGAGACTCGGCGCGCCCCAGGCCCCGGGTGCACGTGGGGGCGCCGGTGCCCGGATGATGGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS CCA 90 bp CAGTGCTCAGAAGGCCGCCGCACACAGCGGCACACAGCATCATCATaGGAGCTAGAGCACCGCCTTCCCTGCGCGGGGCTGGGACGAGGC +
Preference number: 5 (lower is better)
Translates to: QCSEGRRTQRHTASS*ELEHRLPCAGLGRG
Trigger: GCCTCGTCCCAGCCCCGCGCAGGGAAGGCGGTGCTCTAGCTCCCATGATGATGCTGTGTGCCGCTGTGTGCGGCGGCCTTCTGAGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS TCA 90 bp CGTCCCGCCCACCAGAGCATGCCGGCCAGGACAAGGGAAGCGGTGTaGCCAGCAGCCAGGCTTCTCCCTCCAGTCACCCCTTACAGCACC +
Preference number: 5 (lower is better)
Translates to: RPAHQSMPARTREAV*PAARLLPPVTPYST
Trigger: GGTGCTGTAAGGGGTGACTGGAGGGAGAAGCCTGGCTGCTGGTCACACCGCTTCCCTTGTCCTGGCCGGCATGCTCTGGTGGGCGGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS GCA 90 bp GAGCCACCTCTGCGCTCTCCAGTTGCACGTTGGACACCTTCTGCCTaGCTGTGCCAGGACACACTCACACTCCCCGGCCCCGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: EPPLRSPVARWTPSA*LCQDTLTLPGPVLG
Trigger: GCCCAGCACGGGGCCGGGGAGTGTGAGTGTGTCCTGGCACAGGCAGGCAGAAGGTGTCCAACGTGCAACTGGAGAGCGCAGAGGTGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS CCA 90 bp CCGCCTTCCCACCCATACATCAGTCCGGCTGCAACGCCCTCTTCCTaGGCCTCAGCTCCCACCCCGGGACCCTCCAATCCGTTCACACAG +
Preference number: 5 (lower is better)
Translates to: PPSHPYISPAATPSS*ASAPTPGPSNPFTQ
Trigger: CTGTGTGAACGGATTGGAGGGTCCCGGGGTGGGAGCTGAGGCCCAGGAAGAGGGCGTTGCAGCCGGACTGATGTATGGGTGGGAAGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS-3UTR CAA 90 bp GGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGGCGGGTGCCCCCACGTaGATGACAGCTACGTTGCAA +
Preference number: 5 (lower is better)
Translates to: GVSGVASSKAMTASTPMRAGAPT*MTATLQ
Trigger: TTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGC...CCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCATGGAAACCGTCCTGAGAAGCCGCTGGCGGACTGCTaGATGCGGTCGCAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: CPPDGSSPRRLHGNRPEKPLADC*MRSQVS
Trigger: CGACACCTGCGACCGCATCAAGCAGTCCGCCAGCGG...CTTCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS GCA 90 bp CGGCACCACACACAGGGGGATGCAAAGCTCCTGGTGGCGGCCTCGTaGCTCGGCCATGTCGCACGCACTCTTGTAAGCCTCGAATCCACC +
Preference number: 5 (lower is better)
Translates to: RHHTQGDAKLLVAAS*LGHVARTLVSLEST
Trigger: GGTGGATTCGAGGCTTACAAGAGTGCGTGCGACATGGCCGAGGCACGAGGCCGCCACCAGGAGCTTTGCATCCCCCTGTGTGTGGTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413079.1
CDS-3UTR CAA 90 bp GGCCGTCGGCAATGCCCACGCGCACAGCTGAGCGTACGGCTGCGTTCATCCCAGGTCAGGTGCTCCACGTaGGACTGCAGATCCCTGATG +
Preference number: 5 (lower is better)
Translates to: GRRQCPRAQLSVRLRSSQVRCST*DCRSLM
Trigger: CATCAGGGATCTGCAGTCCAACGTGGAGCACCTGAC...CTGGGATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGCATTGCCGACGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CATAGATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGCACAGCTGAGCCGGCCTCTGCGATGTTaGAGCCTCCGTCCACCATGC +
Preference number: 5 (lower is better)
Translates to: HRWRASCGRRQCPRAQLSRPLRC*SLRPPC
Trigger: GCATGGTGGACGGAGGCTCAAACATCGCAGAGGCCG...GCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATCTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGTCGGAACCCGGCACATaGTTGGACACAGTAGCGGGA +
Preference number: 5 (lower is better)
Translates to: GVSGVASSKAMTASTPMRSEPGT*LDTVAG
Trigger: TCCCGCTACTGTGTCCAACAATGTGCCGGGTTCCGA...CCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TCCTCTGGTGGAGATTCTGGAAGGAACACCCAGTCCGCACCGCAGGCCAAGGCACCGCTGGCGGACTGCTaGATGCGGTCGCAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: SSGGDSGRNTQSAPQAKAPLADC*MRSQVS
Trigger: CGACACCTGCGACCGCATCAAGCAGTCCGCCAGCGG...TGCCTTGGCCTGCGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AGGCCGTGTAATGCATCGTGCACCGACGAGACACCCAAGGTGCCCAGGCTGGCCGATCGTCCCGCCCACTaGCAGGATGCTGGAGACACT +
Preference number: 5 (lower is better)
Translates to: RPCNASCTDETPKVPRLADRPAH*QDAGDT
Trigger: AGTGTCTCCAGCATCCTGCAAGTGGGCGGGACGATC...GGCCAGCCTGGGCACCTTGGGTGTCTCGTCGGTGCACGATGCATTACACGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR CAA 90 bp GGCCGTCGGCAATGCCCACGCGCACAGCTGAGCGTACGGCTGCGTTCATCCCAGTCTTTGATCTGGCCCTaGGCGAAGCCGTCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: GRRQCPRAQLSVRLRSSQSLIWP*AKPSKP
Trigger: TGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAAGA...CTGGGATGAACGCAGCCGTACGCTCAGCTGTGCGCGTGGGCATTGCCGACGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGGTCCAGCCGATTTCTTaGATCTGGCCCTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: GVSGVASSKAMTASTPMRVQPIS*IWPLAK
Trigger: CTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGGAC...CCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGCGAGGAAGGGGACTaGAGCCACCTCTGCGCTCTC +
Preference number: 5 (lower is better)
Translates to: GCPTSACADSGNSITPRPCEEGD*SHLCAL
Trigger: GAGAGCGCAGAGGTGGCTCAAGTCCCCTTCCTCGCA...GGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp GTCCAGCCCCCGACATCTGTCCAGCCGATTTCTTTGATCTGGCCCTTGGCGAAGCAGCCCCGCCAGGGATaGCACGGATCGGGACACTCC +
Preference number: 5 (lower is better)
Translates to: VQPPTSVQPISLIWPLAKQPRQG*HGSGHS
Trigger: GGAGTGTCCCGATCCGTGCAATCCCTGGCGGGGCTG...CTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGGACAGATGTCGGGGGCTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR CAA 90 bp GCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGATGAACACGCGCCGCTaGGTTCCGCTGGCGGACTGC +
Preference number: 5 (lower is better)
Translates to: AQGCPTSACADSGNSITPMNTRR*VPLADC
Trigger: GCAGTCCGCCAGCGGAACCAAGCGGCGCGTGTTCAT...CGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp CTTGGCGAAGCCGTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCCGGCCTCTGCGATGTTaGAGCCTCCGTCCACCATGC +
Preference number: 5 (lower is better)
Translates to: LGEAVKAIIDGEHPVAVGRPLRC*SLRPPC
Trigger: GCATGGTGGACGGAGGCTCAAACATCGCAGAGGCCG...GCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGACGGCTTCGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AGTAGCGGGAACCATGACCATGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCCCGATCACACACAGGTaGGTGATGCCGCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SSGNHDHGDTELLVLLPGPITHR*VMPRCS
Trigger: GCTGCAGCGCGGCATCACCAACCTGTGTGTGATCGG...GCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCATGGTCATGGTTCCCGCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGCTTGATGCGGTCGCAGGTGTCGGTGATAGTGTTCAGGGCGGTGTCTGCCCCGGCGGGTGCCCCCACGTaGATGACAGCTACGTTGCAA +
Preference number: 5 (lower is better)
Translates to: CLMRSQVSVIVFRAVSAPAGAPT*MTATLQ
Trigger: TTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGC...CGGGGCAGACACCGCCCTGAACACTATCACCGACACCTGCGACCGCATCAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GGTTCCCGTTCAGTGACACGACGCAAGCTGGGGTGTCCGGGGTGGCCTCTAGCAGAACCCGGCACATTGTaGGACACAGTAGCGGGAACC +
Preference number: 5 (lower is better)
Translates to: GSRSVTRRKLGCPGWPLAEPGTL*DTVAGT
Trigger: GGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC...TGCTAGAGGCCACCCCGGACACCCCAGCTTGCGTCGTGTCACTGAACGGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTCTCGGAACCCGGCACATaGTTGGACACAGTAGCGGGA +
Preference number: 5 (lower is better)
Translates to: WGHRTPRASPGRLTAPGVSEPGT*LDTVAG
Trigger: TCCCGCTACTGTGTCCAACAATGTGCCGGGTTCCGA...GACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CATGTTCCAGCTGGCCTGAGTCCGACACGTCATAGCTGGCCTTGTACTTGGCCACCGCTGGCGGACTGCTaGATGCGGTCGCAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: HVPAGLSPTRHSWPCTWPPLADC*MRSQVS
Trigger: CGACACCTGCGACCGCATCAAGCAGTCCGCCAGCGG...TGGCCAAGTACAAGGCCAGCTATGACGTGTCGGACTCAGGCCAGCTGGAACATG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS TCA 90 bp GCACCTGGGGAAGTCTTCCAGATGCACAGGCATCGGATCCCAGAGTaGAATGTCTGCCATCCGCCCTCCATGAGGACCCAAGCTCGGCGG +
Preference number: 5 (lower is better)
Translates to: APGEVFQMHRHRIPE*NVCHPPSMRTQARR
Trigger: CCGCCGAGCTTGGGTCCTCATGGAGGGCGGATGGCAGACATTTCACTCTGGGATCCGATGCCTGTGCATCTGGAAGACTTCCCCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS GCA 90 bp AGTAGCCTTCCAGACTCCTGCGAGGAAGGGGACTTGAGCCACCTCTaGGCTCTCCAGTTGCACGTTGGACACCTTCTGCCTGCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SSLPDSCEEGDLSHL*ALQLHVGHLLPACA
Trigger: GGCACAGGCAGGCAGAAGGTGTCCAACGTGCAACTGGAGAGCGCAGAGGTGGCTCAAGTCCCCTTCCTCGCAGGAGTCTGGAAGGCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS CCA 90 bp TGGGAGCTAGAGCACCGCCTTCCCTGCGCGGGGCTGGGACGAGGCTaGACAGGTTTCAGGAATTACTTAGGCAAGAGGCATCCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: WELEHRLPCAGLGRG*TGFRNYLGKRHPKP
Trigger: TGGCTTGGGATGCCTCTTGCCTAAGTAATTCCTGAAACCTGTCCAGCCTCGTCCCAGCCCCGCGCAGGGAAGGCGGTGCTCTAGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS-3UTR CAA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGATGAACACGCGCCGCTaGGTTCCGCTGGCGGACTGC +
Preference number: 5 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWMNTRR*VPLADC
Trigger: GCAGTCCGCCAGCGGAACCAAGCGGCGCGTGTTCAT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TCCGGGGTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCGTGCTCAAAATCCGTTaGCTTCTTCAGCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: SGVASSKAMTASTPMRLAVLKIR*LLQLCH
Trigger: GTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGCAC...GGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCACCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTCATGAGGGGCCGTAGCTaGAGCCACCACTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: WGHRTPRASPGRLTAPGVMRGRS*SHHCSL
Trigger: CAAAGAACAGTGGTGGCTCAAGCTACGGCCCCTCAT...GACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp ACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTGCGGGTGCCCCCACGTaGATGACAGCTACGTTGCAA +
Preference number: 5 (lower is better)
Translates to: TSACADSGNSITPRPWGSAGAPT*MTATLQ
Trigger: TTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGC...ACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp TGTCCACCAGACGGGAGTTCACCGCGGCGGCTGCATGGAAACCGTCCTGAGAAGCCGGGAGAACGCGTTTaGTCCCAAGAATGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: CPPDGSSPRRLHGNRPEKPGERV*SQEWSL
Trigger: GAGGCTCCATTCTTGGGACAAAACGCGTTCTCCCGG...CTTCTCAGGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp GCGTACTTCTGCACGGCCTCCTTATCGATCTGGCCGTTCCTGGCCAGCTCCTCCCCGGGAGAACGCGTTTaGTCCCAAGAATGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: AYFCTASLSIWPFLASSSPGERV*SQEWSL
Trigger: GAGGCTCCATTCTTGGGACAAAACGCGTTCTCCCGG...GGAGGAGCTGGCCAGGAACGGCCAGATCGATAAGGAGGCCGTGCAGAAGTACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGTTCCGCAAGGAGCCCTaGGGGGCCCGGGAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRFRKEP*GARESS
Trigger: GGACGACTCCCGGGCCCCCAAGGGCTCCTTGCGGAA...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS-3UTR CAA 90 bp GGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCCTCTGCGCTCTCCAGTaGCACGTTGGACACCTTCTG +
Preference number: 5 (lower is better)
Translates to: GCPTSACADSGNSITPRPLCALQ*HVGHLL
Trigger: CAGAAGGTGTCCAACGTGCAACTGGAGAGCGCAGAG...GGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp TGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGAACGTGGCCTTCCCCTaGGCCTGTGTGAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: CPTSACADSGNSITPRPWNVAFP*ACVNSW
Trigger: CCAGGAGTTCACACAGGCCAAGGGGAAGGCCACGTT...CCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGGCTAAGGCTCCCAGGTaGCGTTCGCCTGGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWAKAPR*RSPGKR
Trigger: GCGCTTCCCAGGCGAACGCAACCTGGGAGCCTTAGC...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676796.1
CDS GCA 90 bp CAGCGGCACACAGCATCATCATGGGAGCTAGAGCACCGCCTTCCCTaGGCGGGGCTGGGACGAGGCTGGACAGGTTTCAGGAATTACTTA +
Preference number: 5 (lower is better)
Translates to: QRHTASSWELEHRLP*AGLGRGWTGFRNYL
Trigger: TAAGTAATTCCTGAAACCTGTCCAGCCTCGTCCCAGCCCCGCGCAGGGAAGGCGGTGCTCTAGCTCCCATGATGATGCTGTGTGCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS-3UTR CAA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTATGAACACGCGCCGCTaGGTTCCGCTGGCGGACTGC +
Preference number: 5 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTMNTRR*VPLADC
Trigger: GCAGTCCGCCAGCGGAACCAAGCGGCGCGTGTTCAT...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCGGCCTCTGCGATGTTaGAGCCTCCGTCCACCATGC +
Preference number: 5 (lower is better)
Translates to: ESMRHTPQTARTGAGGADRPLRC*SLRPPC
Trigger: GCATGGTGGACGGAGGCTCAAACATCGCAGAGGCCG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCCGATCACACACAGGTaGGTGATGCCGCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWPITHR*VMPRCS
Trigger: GCTGCAGCGCGGCATCACCAACCTGTGTGTGATCGG...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp ATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGCACAGCTGAGCGTACGCGTTGCAATTGGTCTTaGGGATCTGATCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: MASILWPSAMPTRTAERTRCNWS*GSDHPA
Trigger: TGCCGGATGATCAGATCCCAAAGACCAATTGCAACG...CGTACGCTCAGCTGTGCGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GTGGCCTCTAGCAAGGCGATGACTGCCTCCACTCCCATGCGGCTGGCCAAGATCTCTTTGATCTGGCCCTaGGCGAAGCCGTCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: VASSKAMTASTPMRLAKISLIWP*AKPSKP
Trigger: TGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAAGA...GATCTTGGCCAGCCGCATGGGAGTGGAGGCAGTCATCGCCTTGCTAGAGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp ACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTATGATCAGCAGCGCGTaGATGCTGTGCGTGCGCATC +
Preference number: 5 (lower is better)
Translates to: TSACADSGNSITPRPWGSMISSA*MLCVRI
Trigger: GATGCGCACGCACAGCATCAACGCGCTGCTGATCAT...ACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp TCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTGTCGAACCCGGCACATTGTaGGACACAGTAGCGGGAACC +
Preference number: 5 (lower is better)
Translates to: SACADSGNSITPRPWGSVEPGTL*DTVAGT
Trigger: GGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC...GACACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTCCGCTGGCGGACTGCTaGATGCGGTCGCAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: CTSESMRHTPQTARTGAGPLADC*MRSQVS
Trigger: CGACACCTGCGACCGCATCAAGCAGTCCGCCAGCGG...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAAGCACGCCGATGGCCTaGCCGGCCCCGGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: ICTSESMRHTPQTARTGASTPMA*PAPERC
Trigger: GCACCTCTCCGGGGCCGGCAAGGCCATCGGCGTGCT...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS-3UTR CAA 90 bp GGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCCAGATACCTTCTCTATaGGGCACAGTCGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GCPTSACADSGNSITPRPQIPSL*GTVGSC
Trigger: GCAGCTGCCGACTGTGCCCAATAGAGAAGGTATCTG...GGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp TTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGTCTCCGCCCTGCCCTaGGCCATGGGCTGCCCACTC +
Preference number: 5 (lower is better)
Translates to: FQSFYQMERVPHPAACDPVSALP*AMGCPL
Trigger: GAGTGGGCAGCCCATGGCCAAGGGCAGGGCGGAGAC...TGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS TCA 90 bp ACGGAAAAGACGACCCCACAAGCCAGCTCACTCCACGCTGCTCTGTaGCTGTCCCTGCTGAAGCCGCTTTCACCGGACACAGACACCGTT +
Preference number: 5 (lower is better)
Translates to: TEKTTPQASSLHAAL*LSLLKPLSPDTDTV
Trigger: AACGGTGTCTGTGTCCGGTGAAAGCGGCTTCAGCAGGGACAGTCACAGAGCAGCGTGGAGTGAGCTGGCTTGTGGGGTCGTCTTTTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS GCA 90 bp CTCCATGAGGACCCAAGCTCGGCGGGGAGAAAAATGGCAAAGAAATaGATCGGCCGCCTTCCCACCCATACATCAGTCCGGCTGCAACGC +
Preference number: 5 (lower is better)
Translates to: LHEDPSSAGRKMAKK*IGRLPTHTSVRLQR
Trigger: GCGTTGCAGCCGGACTGATGTATGGGTGGGAAGGCGGCCGATGCATTTCTTTGCCATTTTTCTCCCCGCCGAGCTTGGGTCCTCATGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS CCA 90 bp TACATCCAATGCACTGTGCGGTTGCCCATCCACAGCTTAACAGCCTaGTGCCAGTTACCCTGCGATGGGAGAGGGGGCAGCCCCCATAGA +
Preference number: 5 (lower is better)
Translates to: YIQCTVRLPIHSLTA*CQLPCDGRGGSPHR
Trigger: TCTATGGGGGCTGCCCCCTCTCCCATCGCAGGGTAACTGGCACCAGGCTGTTAAGCTGTGGATGGGCAACCGCACAGTGCATTGGATGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607886.5
CDS-3UTR CAA 90 bp CAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCATGTGACCCAGCAATGAACACGCGCCGCTaGGTTCCGCTGGCGGACTGC +
Preference number: 5 (lower is better)
Translates to: QSFYQMERVPHPAACDPAMNTRR*VPLADC
Trigger: GCAGTCCGCCAGCGGAACCAAGCGGCGCGTGTTCAT...TGCTGGGTCACATGCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTCGGCCTCTGCGATGTTaGAGCCTCCGTCCACCATGC +
Preference number: 5 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTRPLRC*SLRPPC
Trigger: GCATGGTGGACGGAGGCTCAAACATCGCAGAGGCCG...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGATCGTCCCGCCCACTaGCAGGATGCTGGAGACACT +
Preference number: 5 (lower is better)
Translates to: ESMRHTPQTARTGAGGADDRPAH*QDAGDT
Trigger: AGTGTCTCCAGCATCCTGCAAGTGGGCGGGACGATC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GTCAAAGCCATCATAGATGGCGAGCATCCTGTGGCCGTCGGCAATGCCCACGCGCGGTTCTCCGAGAGTTaGACACACATCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VKAIIDGEHPVAVGNAHARFSES*THICSS
Trigger: GGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACCG...CGCGTGGGCATTGCCGACGGCCACAGGATGCTCGCCATCTATGATGGCTTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGGGGACACAGAACTCCTCGTGCTTCTCCCGGGCGGCTGACAGCTCCAGGAGTCGAGTCGAACCGCATCTaGAAATCTCCTCTCGTCCAT +
Preference number: 5 (lower is better)
Translates to: WGHRTPRASPGRLTAPGVESNRI*KSPLVH
Trigger: ATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTC...GACTCCTGGAGCTGTCAGCCGCCCGGGAGAAGCACGAGGAGTTCTGTGTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGCGGGTGCCCCCACGTaGATGACAGCTACGTTGCAA +
Preference number: 5 (lower is better)
Translates to: ESMRHTPQTARTGAGGADAGAPT*MTATLQ
Trigger: TTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTTCTTTGATCTGGCCCTaGGCGAAGCCGTCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: GVPRLPALIQETPSHRGPSLIWP*AKPSKP
Trigger: TGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAAGA...AGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp TGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGTCCAGCCGATTTCTTaGATCTGGCCCTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: CPTSACADSGNSITPRPWVQPIS*IWPLAK
Trigger: CTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGGAC...CCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS TCA 90 bp TTGCAGGATGCTGGAGACACTCTCCCAGTCGGCCTCTGCGATGTTTaGGCCTCCGTCCACCATGCCCTGGTAGCCCTCGTAGATGAAGTA +
Preference number: 5 (lower is better)
Translates to: LQDAGDTLPVGLCDV*ASVHHALVALVDEV
Trigger: TACTTCATCTACGAGGGCTACCAGGGCATGGTGGACGGAGGCTCAAACATCGCAGAGGCCGACTGGGAGAGTGTCTCCAGCATCCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000407806.2
ENST00000421751.1
ENST00000607886.5
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS TCA 90 bp AAACGCTATGCAGTAGCCTTCCAGACTCCTGCGAGGAAGGGGACTTaGGCCACCTCTGCGCTCTCCAGTTGCACGTTGGACACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: KRYAVAFQTPARKGT*ATSALSSCTLDTFC
Trigger: GCAGAAGGTGTCCAACGTGCAACTGGAGAGCGCAGAGGTGGCTCAAGTCCCCTTCCTCGCAGGAGTCTGGAAGGCTACTGCATAGCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp GGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCCAGTCAAACACGCCTTaGCCCTCTTCTGAATACAGC +
Preference number: 5 (lower is better)
Translates to: GCPTSACADSGNSITPRPQSNTP*PSSEYS
Trigger: GCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACTG...GGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR CAA 90 bp AGTGACACGACGCAAGCTGGGGTGTCCGGGGTGGCCTCTAGCAAGGCGATGACTCAGTCAAACACGCCTTaGCCCTCTTCTGAATACAGC +
Preference number: 5 (lower is better)
Translates to: SDTTQAGVSGVASSKAMTQSNTP*PSSEYS
Trigger: GCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACTG...AGTCATCGCCTTGCTAGAGGCCACCCCGGACACCCCAGCTTGCGTCGTGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTGCTTGATGCGGTCGCAGGTGTCGGTGATAGTGTTCAGGGCGGTGTCTGCCCCGTGCTCAAAATCCGTTaGCTTCTTCAGCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLDAVAGVGDSVQGGVCPVLKIR*LLQLCH
Trigger: GTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGCAC...GGGGCAGACACCGCCCTGAACACTATCACCGACACCTGCGACCGCATCAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGATCGTCCCGCCCACTaGCAGGATGCTGGAGACACT +
Preference number: 5 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTDRPAH*QDAGDT
Trigger: AGTGTCTCCAGCATCCTGCAAGTGGGCGGGACGATC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCCGATCACACACAGGTaGGTGATGCCGCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRPITHR*VMPRCS
Trigger: GCTGCAGCGCGGCATCACCAACCTGTGTGTGATCGG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp ATGCATCGTGCACCGACGAGACACCCAAGGTGCCCAGGCTGGCCTGACAAGCAGGAGTCGAACCGCATCTaGAAATCTCCTCTCGTCCAT +
Preference number: 5 (lower is better)
Translates to: MHRAPTRHPRCPGWPDKQESNRI*KSPLVH
Trigger: ATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTC...CTGCTTGTCAGGCCAGCCTGGGCACCTTGGGTGTCTCGTCGGTGCACGATGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR CAA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGATGATCAGCAGCGCGTaGATGCTGTGCGTGCGCATC +
Preference number: 5 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWMISSA*MLCVRI
Trigger: GATGCGCACGCACAGCATCAACGCGCTGCTGATCAT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TCGAATCCACCGATGATCAGCAGCGCGTTGATGCTGTGCGTGCGCATCTGTGTGATGATCAGCAGCGCGTaGATGCTGTGCGTGCGCATC +
Preference number: 5 (lower is better)
Translates to: SNPPMISSALMLCVRICVMISSA*MLCVRI
Trigger: GATGCGCACGCACAGCATCAACGCGCTGCTGATCAT...CACACAGATGCGCACGCACAGCATCAACGCGCTGCTGATCATCGGTGGATTCGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGTCGGAACCCGGCACATaGTTGGACACAGTAGCGGGA +
Preference number: 5 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWSEPGT*LDTVAG
Trigger: TCCCGCTACTGTGTCCAACAATGTGCCGGGTTCCGA...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCTCTCCAGTTGCACGTaGGACACCTTCTGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWLSSCT*DTFCLP
Trigger: AGGCAGGCAGAAGGTGTCCAACGTGCAACTGGAGAG...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp GCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGCAGAGAAAAGGGGCTTaGACAGCCGAGTTAGCCAGG +
Preference number: 5 (lower is better)
Translates to: AQGCPTSACADSGNSITPQRKGA*TAELAR
Trigger: CCTGGCTAACTCGGCTGTCAAAGCCCCTTTTCTCTG...CGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp TCCCTGATGTCGAAGGGCTCTTCGAAAATGTATGCGGCATCAGCTCCGGCCGCGCCCTTACAGCACCACTaGCAGGATGCTGGAGACACT +
Preference number: 5 (lower is better)
Translates to: SLMSKGSSKMYAASAPAAPLQHH*QDAGDT
Trigger: AGTGTCTCCAGCATCCTGCAAGTGGTGCTGTAAGGG...CGCGGCCGGAGCTGATGCCGCATACATTTTCGAAGAGCCCTTCGACATCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS GCA 90 bp CAAAGGGAAACATGGCTTAGAAAGCAGACAGGGGAAACCTGCCAGTaGTCAGAAGGCCGCCGCACACAGCGGCACACAGCATCATCATGG +
Preference number: 5 (lower is better)
Translates to: QRETWLRKQTGETCQ*SEGRRTQRHTASSW
Trigger: CCATGATGATGCTGTGTGCCGCTGTGTGCGGCGGCCTTCTGAGCACTGGCAGGTTTCCCCTGTCTGCTTTCTAAGCCATGTTTCCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS-3UTR CAA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAATGAACACGCGCCGCTaGGTTCCGCTGGCGGACTGC +
Preference number: 5 (lower is better)
Translates to: ICTSESMRHTPQTARTGAMNTRR*VPLADC
Trigger: GCAGTCCGCCAGCGGAACCAAGCGGCGCGTGTTCAT...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGTCAGGTGCTCCACGTaGGACTGCAGATCCCTGATG +
Preference number: 5 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTVRCST*DCRSLM
Trigger: CATCAGGGATCTGCAGTCCAACGTGGAGCACCTGAC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GTCAGGTGCTCCACGTTGGACTGCAGATCCCTGATGTCGAAGGGCTCTTCGAAAGTCAGGTGCTCCACGTaGGACTGCAGATCCCTGATG +
Preference number: 5 (lower is better)
Translates to: VRCSTLDCRSLMSKGSSKVRCST*DCRSLM
Trigger: CATCAGGGATCTGCAGTCCAACGTGGAGCACCTGAC...TTTCGAAGAGCCCTTCGACATCAGGGATCTGCAGTCCAACGTGGAGCACCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATATGAGGGGCCGTAGCTaGAGCCACCACTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: ESMRHTPQTARTGAGGADMRGRS*SHHCSL
Trigger: CAAAGAACAGTGGTGGCTCAAGCTACGGCCCCTCAT...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CATGTTCCAGCTGGCCTGAGTCCGACACGTCATAGCTGGCCTTGTACTTGGCCAATGAGGGGCCGTAGCTaGAGCCACCACTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: HVPAGLSPTRHSWPCTWPMRGRS*SHHCSL
Trigger: CAAAGAACAGTGGTGGCTCAAGCTACGGCCCCTCAT...TGGCCAAGTACAAGGCCAGCTATGACGTGTCGGACTCAGGCCAGCTGGAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGATCGTCCCGCCCACTaGCAGGATGCTGGAGACACT +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRDRPAH*QDAGDT
Trigger: AGTGTCTCCAGCATCCTGCAAGTGGGCGGGACGATC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000676796.1
ENST00000678206.1
CDS-3UTR CAA 90 bp ATCAGCAGCGCGTTGATGCTGTGCGTGCGCATCTGTGTGGCGATCTCTTCCAAGCGGTTCTCCGAGAGTTaGACACACATCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ISSALMLCVRICVAISSKRFSES*THICSS
Trigger: GGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACCG...CTTGGAAGAGATCGCCACACAGATGCGCACGCACAGCATCAACGCGCTGCTGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TCCTCCCAGCCTTCCTCTGGTGGAGATTCTGGAAGGAACACCCAGTCCGCACCGCGTTGCAATTGGTCTTaGGGATCTGATCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: SSQPSSGGDSGRNTQSAPRCNWS*GSDHPA
Trigger: TGCCGGATGATCAGATCCCAAAGACCAATTGCAACG...CGGTGCGGACTGGGTGTTCCTTCCAGAATCTCCACCAGAGGAAGGCTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGCGGGTGCCCCCACGTaGATGACAGCTACGTTGCAA +
Preference number: 5 (lower is better)
Translates to: CTSESMRHTPQTARTGAGAGAPT*MTATLQ
Trigger: TTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGCGGGTGCCCCCACGTaGATGACAGCTACGTTGCAA +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRAGAPT*MTATLQ
Trigger: TTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGAACCCGGCACATTGTaGGACACAGTAGCGGGAACC +
Preference number: 5 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTEPGTL*DTVAGT
Trigger: GGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTTCGGAACCCGGCACATaGTTGGACACAGTAGCGGGA +
Preference number: 5 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTSEPGT*LDTVAG
Trigger: TCCCGCTACTGTGTCCAACAATGTGCCGGGTTCCGA...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGTCAGGTGCTCCACGTaGGACTGCAGATCCCTGATG +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRVRCST*DCRSLM
Trigger: CATCAGGGATCTGCAGTCCAACGTGGAGCACCTGAC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGGCTCTGGCAGAGATTTaGGTTCCAAAGTTTCTATCA +
Preference number: 5 (lower is better)
Translates to: PTSACADSGNSITPRPWGALAEI*VPKFLS
Trigger: TGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGC...CCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR CAA 90 bp TCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTGTCAGCCACCACTGTTCTTaGGGAATCCTGTGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: SACADSGNSITPRPWGSVSHHCS*GILCSK
Trigger: TTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCT...GACACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp AAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCAATGAGGGGCCGTAGCTaGAGCCACCACTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: KVHKGVPRLPALIQETPSMRGRS*SHHCSL
Trigger: CAAAGAACAGTGGTGGCTCAAGCTACGGCCCCTCAT...TGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp GAGATTTTGGTTCCAAAGTTTCTATCAAATGGAGAGGGTGCCCCACCCTGCTGCAGAGCAGCTTCCACATaGCAGGGCAGGGAAGCCCGG +
Preference number: 5 (lower is better)
Translates to: EILVPKFLSNGEGAPPCCRAAST*QGREAR
Trigger: CCGGGCTTCCCTGCCCTGCAATGTGGAAGCTGCTCT...GCAGCAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTGGAACCAAAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678206.1
CDS-3UTR CAA 90 bp GCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGCGTTGCAATTGGTCTTaGGGATCTGATCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: AQGCPTSACADSGNSITPRCNWS*GSDHPA
Trigger: TGCCGGATGATCAGATCCCAAAGACCAATTGCAACG...CGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGTCCAGCCGATTTCTTaGATCTGGCCCTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTVQPIS*IWPLAK
Trigger: CTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGGAC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCCGGGAGAACGCGTTTaGTCCCAAGAATGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRPGERV*SQEWSL
Trigger: GAGGCTCCATTCTTGGGACAAAACGCGTTCTCCCGG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGATGATCAGCAGCGCGTaGATGCTGTGCGTGCGCATC +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRMISSA*MLCVRI
Trigger: GATGCGCACGCACAGCATCAACGCGCTGCTGATCAT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGAACCCGGCACATTGTaGGACACAGTAGCGGGAACC +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRREPGTL*DTVAGT
Trigger: GGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGTCGGAACCCGGCACATaGTTGGACACAGTAGCGGGA +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRSEPGT*LDTVAG
Trigger: TCCCGCTACTGTGTCCAACAATGTGCCGGGTTCCGA...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS TCA 90 bp ACAGGCATCGGATCCCAGAGTGAAATGTCTGCCATCCGCCCTCCATaGGGACCCAAGCTCGGCGGGGAGAAAAATGGCAAAGAAATGCAT +
Preference number: 5 (lower is better)
Translates to: TGIGSQSEMSAIRPP*GPKLGGEKNGKEMH
Trigger: ATGCATTTCTTTGCCATTTTTCTCCCCGCCGAGCTTGGGTCCTCATGGAGGGCGGATGGCAGACATTTCACTCTGGGATCCGATGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS GCA 90 bp CATTTTCTACTAAGGCAAACGCTATGCAGTAGCCTTCCAGACTCCTaGGAGGAAGGGGACTTGAGCCACCTCTGCGCTCTCCAGTTGCAC +
Preference number: 5 (lower is better)
Translates to: HFLLRQTLCSSLPDS*EEGDLSHLCALQLH
Trigger: GTGCAACTGGAGAGCGCAGAGGTGGCTCAAGTCCCCTTCCTCGCAGGAGTCTGGAAGGCTACTGCATAGCGTTTGCCTTAGTAGAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGCAGTCAAACACGCCTTaGCCCTCTTCTGAATACAGC +
Preference number: 5 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWQSNTP*PSSEYS
Trigger: GCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACTG...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GCCGCGGGTGCCCCCACGTTGATGACAGCTACGTTGCAATTGGTCTTTGGGATCAGCCACCACTGTTCTTaGGGAATCCTGTGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: AAGAPTLMTATLQLVFGISHHCS*GILCSK
Trigger: TTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCT...GATCCCAAAGACCAATTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTATGAGGGGCCGTAGCTaGAGCCACCACTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: CTSESMRHTPQTARTGAGMRGRS*SHHCSL
Trigger: CAAAGAACAGTGGTGGCTCAAGCTACGGCCCCTCAT...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCGGTTCTCCGAGAGTTaGACACACATCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRRFSES*THICSS
Trigger: GGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACCG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGGAGTCGAACCGCATCTaGAAATCTCCTCTCGTCCAT +
Preference number: 5 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWESNRI*KSPLVH
Trigger: ATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTC...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATCGTTGCAATTGGTCTTaGGGATCTGATCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: ESMRHTPQTARTGAGGADRCNWS*GSDHPA
Trigger: TGCCGGATGATCAGATCCCAAAGACCAATTGCAACG...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAAACAGAGTTTGTTTTaGGCCTCTCCTCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: AQGCPTSACADSGNSITPKQSLF*ASPLPP
Trigger: TGGAGGGAGAGGAGAGGCCAAAAACAAACTCTGTTT...CGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp ACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGGGGAGTGCTCTGGCAGAGATTTaGGTTCCAAAGTTTCTATCA +
Preference number: 5 (lower is better)
Translates to: TSACADSGNSITPRPWGSALAEI*VPKFLS
Trigger: TGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGC...ACTCCCCCAGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415005.6
ENST00000433193.2
CDS-3UTR CAA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGTGCTCAAAATCCGTTaGCTTCTTCAGCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTVLKIR*LLQLCH
Trigger: GTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGCAC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AAGGTGCACAAGGGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCAGTGCTCAAAATCCGTTaGCTTCTTCAGCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: KVHKGVPRLPALIQETPSVLKIR*LLQLCH
Trigger: GTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGCAC...TGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACCCTTGTGCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATAGCCACCACTGTTCTTaGGGAATCCTGTGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: ESMRHTPQTARTGAGGADSHHCS*GILCSK
Trigger: TTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCT...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGGAGCCACCACTGTTCTTaGGGAATCCTGTGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: CYKNRQSTVAAGTCRRDWSHHCS*GILCSK
Trigger: TTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCT...CCAGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GGTGTCCCACGTCTGCCTGCGCTGATTCAGGAAACTCCATCACACCGAGGCCCTGGTGATGGGTTTATTTaGGGTATCAATTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GVPRLPALIQETPSHRGPGDGFI*GINCSF
Trigger: GAAGGAGCAATTGATACCCAAAATAAACCCATCACC...AGGGCCTCGGTGTGATGGAGTTTCCTGAATCAGCGCAGGCAGACGTGGGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGAGTCGAACCGCATCTaGAAATCTCCTCTCGTCCAT +
Preference number: 5 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTESNRI*KSPLVH
Trigger: ATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCACCGGGAGAACGCGTTTaGTCCCAAGAATGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: ICTSESMRHTPQTARTGAPGERV*SQEWSL
Trigger: GAGGCTCCATTCTTGGGACAAAACGCGTTCTCCCGG...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACCGCTGGCGGACTGCTaGATGCGGTCGCAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: LILLICTSESMRHTPQTAPLADC*MRSQVS
Trigger: CGACACCTGCGACCGCATCAAGCAGTCCGCCAGCGG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCCGCTGGCGGACTGCTaGATGCGGTCGCAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCPLADC*MRSQVS
Trigger: CGACACCTGCGACCGCATCAAGCAGTCCGCCAGCGG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AGCAGCCGTGTCTACTCTGGCAGGAGTCTTCCGGAGAGTTCCAACCTAGGTCCCTTTCCCAAACAGAGTTaGTTTTTGGCCTCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: SSRVYSGRSLPESSNLGPFPKQS*FLASPL
Trigger: GAGAGGAGAGGCCAAAAACAAACTCTGTTTGGGAAA...GGGACCTAGGTTGGAACTCTCCGGAAGACTCCTGCCAGAGTAGACACGGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp TGGGTTGGGGTGAGTAAGCGCTTGCTTCATCGTTACAGAGCCAGAAAGGAAAGCGGGGTGAGTAAGCGCTaGCTTCATCGTTACAGAGCC +
Preference number: 5 (lower is better)
Translates to: WVGVSKRLLHRYRARKESGVSKR*LHRYRA
Trigger: GGCTCTGTAACGATGAAGCAAGCGCTTACTCACCCC...GCTTTCCTTTCTGGCTCTGTAACGATGAAGCAAGCGCTTACTCACCCCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS CCA 90 bp GAAACTCTACTCAAAGGCAGATGGTGGTTCTTAGACCCAGGCACCTaGGGAAGTCTTCCAGATGCACAGGCATCGGATCCCAGAGTGAAA +
Preference number: 5 (lower is better)
Translates to: ETLLKGRWWFLDPGT*GSLPDAQASDPRVK
Trigger: TTTCACTCTGGGATCCGATGCCTGTGCATCTGGAAGACTTCCCCAGGTGCCTGGGTCTAAGAACCACCATCTGCCTTTGAGTAGAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS-3UTR CAA 90 bp GTCCAGCCCCCGACATCTGTCCAGCCGATTTCTTTGATCTGGCCCTTGGCGAAGGCTCTGGCAGAGATTTaGGTTCCAAAGTTTCTATCA +
Preference number: 5 (lower is better)
Translates to: VQPPTSVQPISLIWPLAKALAEI*VPKFLS
Trigger: TGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGC...CTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGGACAGATGTCGGGGGCTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGTGCTCAAAATCCGTTaGCTTCTTCAGCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: CTSESMRHTPQTARTGAGVLKIR*LLQLCH
Trigger: GTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGCAC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTAGCCACCACTGTTCTTaGGGAATCCTGTGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTSHHCS*GILCSK
Trigger: TTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCT...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCACGGTTCTCCGAGAGTTaGACACACATCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ICTSESMRHTPQTARTGARFSES*THICSS
Trigger: GGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACCG...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GTCCAGCCCCCGACATCTGTCCAGCCGATTTCTTTGATCTGGCCCTTGGCGAAGGGTGATGGGTTTATTTaGGGTATCAATTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VQPPTSVQPISLIWPLAKGDGFI*GINCSF
Trigger: GAAGGAGCAATTGATACCCAAAATAAACCCATCACC...CTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGGACAGATGTCGGGGGCTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGCGTTGCAATTGGTCTTaGGGATCTGATCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRRCNWS*GSDHPA
Trigger: TGCCGGATGATCAGATCCCAAAGACCAATTGCAACG...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCATCTTTGATCTGGCCCTaGGCGAAGCCGTCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: ICTSESMRHTPQTARTGASLIWP*AKPSKP
Trigger: TGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAAGA...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGTCCAGCCGATTTCTTaGATCTGGCCCTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: ICTSESMRHTPQTARTGAVQPIS*IWPLAK
Trigger: CTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGGAC...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TTTCTGAGGCGCAGCTGTTCTCTCTTGCAGACTAGAGCTAAGAGGCAGAAACGCCAGTCAAACACGCCTTaGCCCTCTTCTGAATACAGC +
Preference number: 5 (lower is better)
Translates to: FLRRSCSLLQTRAKRQKRQSNTP*PSSEYS
Trigger: GCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACTG...GCGTTTCTGCCTCTTAGCTCTAGTCTGCAAGAGAGAACAGCTGCGCCTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCAGAGCAGCTTCCACATaGCAGGGCAGGGAAGCCCGG +
Preference number: 5 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCRAAST*QGREAR
Trigger: CCGGGCTTCCCTGCCCTGCAATGTGGAAGCTGCTCT...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381075.7
ENST00000678206.1
CDS-3UTR CAA 90 bp GAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGGGCAGATGGTGATGGGTTTATTTaGGGTATCAATTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ESMRHTPQTARTGAGGADGDGFI*GINCSF
Trigger: GAAGGAGCAATTGATACCCAAAATAAACCCATCACC...ATCTGCCCCACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TTTCTGAGGCGCAGCTGTTCTCTCTTGCAGACTAGAGCTAAGAGGCAGAAACGCGAGTCGAACCGCATCTaGAAATCTCCTCTCGTCCAT +
Preference number: 5 (lower is better)
Translates to: FLRRSCSLLQTRAKRQKRESNRI*KSPLVH
Trigger: ATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTC...GCGTTTCTGCCTCTTAGCTCTAGTCTGCAAGAGAGAACAGCTGCGCCTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp CTTGAGCCACCACTGTTCTTTGGGAATCCTGTGCTCAAAATCCGTTTGCTTCTTGAACCCGGCACATTGTaGGACACAGTAGCGGGAACC +
Preference number: 5 (lower is better)
Translates to: LEPPLFFGNPVLKIRLLLEPGTL*DTVAGT
Trigger: GGTTCCCGCTACTGTGTCCAACAATGTGCCGGGTTC...AAGAAGCAAACGGATTTTGAGCACAGGATTCCCAAAGAACAGTGGTGGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGGCAGCGTTCATACCTaGAGCATCCCCGCCGCTGGT +
Preference number: 5 (lower is better)
Translates to: LILLICTSESMRHTPQTAGSVHT*SIPAAG
Trigger: ACCAGCGGCGGGGATGCTCAAGGTATGAACGCTGCC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGTGTGAACTCCTGGCTTaGTTCTCCTTGTATGACGTG +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRCELLA*FSLYDV
Trigger: CACGTCATACAAGGAGAACAAAGCCAGGAGTTCACA...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp ATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCACAGTCAAACACGCCTTaGCCCTCTTCTGAATACAGC +
Preference number: 5 (lower is better)
Translates to: ICTSESMRHTPQTARTGAQSNTP*PSSEYS
Trigger: GCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACTG...TGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGACTGCTCTGGCAGAGATTTaGGTTCCAAAGTTTCTATCA +
Preference number: 5 (lower is better)
Translates to: SVTKTDSPRWLQAHAGGTALAEI*VPKFLS
Trigger: TGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGC...AGTCCCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GTCAGGTGCTCCACGTTGGACTGCAGATCCCTGATGTCGAAGGGCTCTTCGAAAGGTGATGGGTTTATTTaGGGTATCAATTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VRCSTLDCRSLMSKGSSKGDGFI*GINCSF
Trigger: GAAGGAGCAATTGATACCCAAAATAAACCCATCACC...TTTCGAAGAGCCCTTCGACATCAGGGATCTGCAGTCCAACGTGGAGCACCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GCAGTGATCCACTCCATAGCTCTGGCAGAGATTTTGGTTCCAAAGTTTCTATCACCGGGAGAACGCGTTTaGTCCCAAGAATGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: AVIHSIALAEILVPKFLSPGERV*SQEWSL
Trigger: GAGGCTCCATTCTTGGGACAAAACGCGTTCTCCCGG...TGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGCTATGGAGTGGATCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGGCTCTGGCAGAGATTTaGGTTCCAAAGTTTCTATCA +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRALAEI*VPKFLS
Trigger: TGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGC...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGCACTGGAGCAGGTGGTGATGGGTTTATTTaGGGTATCAATTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: CTSESMRHTPQTARTGAGGDGFI*GINCSF
Trigger: GAAGGAGCAATTGATACCCAAAATAAACCCATCACC...ACCTGCTCCAGTGCGTGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACCGGGAGAACGCGTTTaGTCCCAAGAATGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: LILLICTSESMRHTPQTAPGERV*SQEWSL
Trigger: GAGGCTCCATTCTTGGGACAAAACGCGTTCTCCCGG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCATGATCAGCAGCGCGTaGATGCTGTGCGTGCGCATC +
Preference number: 5 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCMISSA*MLCVRI
Trigger: GATGCGCACGCACAGCATCAACGCGCTGCTGATCAT...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp GATTTTCTCAGAGGTGATGGGTTTATTTTGGGTATCAATTGCTCCTTCAGCCACATGATCAGCAGCGCGTaGATGCTGTGCGTGCGCATC +
Preference number: 5 (lower is better)
Translates to: DFLRGDGFILGINCSFSHMISSA*MLCVRI
Trigger: GATGCGCACGCACAGCATCAACGCGCTGCTGATCAT...GTGGCTGAAGGAGCAATTGATACCCAAAATAAACCCATCACCTCTGAGAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCATCGGAACCCGGCACATaGTTGGACACAGTAGCGGGA +
Preference number: 5 (lower is better)
Translates to: LILLICTSESMRHTPQTASEPGT*LDTVAG
Trigger: TCCCGCTACTGTGTCCAACAATGTGCCGGGTTCCGA...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CTTAAGTGTTACAAAAACAGACAGTCCACGGTGGCTGCAGGCACATGCAGGCGGAACATGCAGCTAGGATaGCAATCAAGAGGACAAGTA +
Preference number: 5 (lower is better)
Translates to: LKCYKNRQSTVAAGTCRRNMQLG*QSRGQV
Trigger: TACTTGTCCTCTTGATTGCAATCCTAGCTGCATGTT...CCGCCTGCATGTGCCTGCAGCCACCGTGGACTGTCTGTTTTTGTAACACTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS-3UTR CAA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAATGAGGGGCCGTAGCTaGAGCCACCACTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LILLICTSESMRHTPQTAMRGRS*SHHCSL
Trigger: CAAAGAACAGTGGTGGCTCAAGCTACGGCCCCTCAT...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCGGTTCTCCGAGAGTTaGACACACATCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCRFSES*THICSS
Trigger: GGAGGAGCAGATGTGTGTCAAACTCTCGGAGAACCG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCATCTTTGATCTGGCCCTaGGCGAAGCCGTCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: LILLICTSESMRHTPQTASLIWP*AKPSKP
Trigger: TGGCTTTGACGGCTTCGCCAAGGGCCAGATCAAAGA...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp AGTTTTGCAGTGATCCACTCCATAGCTCTGGCAGAGATTTTGGTTCCAAAGTTTGTCCAGCCGATTTCTTaGATCTGGCCCTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: SFAVIHSIALAEILVPKFVQPIS*IWPLAK
Trigger: CTTCGCCAAGGGCCAGATCAAAGAAATCGGCTGGAC...AAACTTTGGAACCAAAATCTCTGCCAGAGCTATGGAGTGGATCACTGCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCCAGTCAAACACGCCTTaGCCCTCTTCTGAATACAGC +
Preference number: 5 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCQSNTP*PSSEYS
Trigger: GCTGTATTCAGAAGAGGGCAAAGGCGTGTTTGACTG...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGTGCTCAAAATCCGTTaGCTTCTTCAGCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: LILLICTSESMRHTPQTAVLKIR*LLQLCH
Trigger: GTGGCAGAGCTGAAGAAGCAAACGGATTTTGAGCAC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCAGAGTCGAACCGCATCTaGAAATCTCCTCTCGTCCAT +
Preference number: 5 (lower is better)
Translates to: LILLICTSESMRHTPQTAESNRI*KSPLVH
Trigger: ATGGACGAGAGGAGATTTCAAGATGCGGTTCGACTC...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS-3UTR CAA 90 bp TTAATTCTGCTCATATGCACATCTGAAAGCATGAGACACACTCCACAGACAGCACGTTGCAATTGGTCTTaGGGATCTGATCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: LILLICTSESMRHTPQTARCNWS*GSDHPA
Trigger: TGCCGGATGATCAGATCCCAAAGACCAATTGCAACG...TGCTGTCTGTGGAGTGTGTCTCATGCTTTCAGATGTGCATATGAGCAGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS CCA 90 bp GAAAAGCTCCCTGTGATTTTAGAGGTGCGGCCATCTTCCATCCATTaGCGAATGTTACATTTATGGAAACTCTACTCAAAGGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: EKLPVILEVRPSSIH*RMLHLWKLYSKADG
Trigger: ACCATCTGCCTTTGAGTAGAGTTTCCATAAATGTAACATTCGCCAATGGATGGAAGATGGCCGCACCTCTAAAATCACAGGGAGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS-3UTR CAA 90 bp CAGATGGGCACTCGCCGATTAGGTATTAATGTCAATAATACGTGCATAAAGTGCGCTCTGGCAGAGATTTaGGTTCCAAAGTTTCTATCA +
Preference number: 5 (lower is better)
Translates to: QMGTRRLGINVNNTCIKCALAEI*VPKFLS
Trigger: TGATAGAAACTTTGGAACCAAAATCTCTGCCAGAGC...GCACTTTATGCACGTATTATTGACATTAATACCTAATCGGCGAGTGCCCATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000415005.6
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS CCA 90 bp TCCTTTCAAATACTTTTTAGTCTTAAGTTGCCAGGACTTCAAAAGTaGCAGACAGGGAGTCACTCCTGCTATTTAACACATCAGCAGACA +
Preference number: 5 (lower is better)
Translates to: SFQILFSLKLPGLQK*QTGSHSCYLTHQQT
Trigger: TGTCTGCTGATGTGTTAAATAGCAGGAGTGACTCCCTGTCTGCCACTTTTGAAGTCCTGGCAACTTAAGACTAAAAAGTATTTGAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS CCA 72 bp ATCCGGGCACCGGCGCCCCCACGTGCACCCGGGGCCTaGGGCGCGCCGAGTCTCCGCCACCTTCCGCTCTTC +
Preference number: 6 (lower is better)
Translates to: IRAPAPPRAPGA*GAPSLRHLPLF
Trigger: GAAGAGCGGAAGGTGGCGGAGACTCGGCGCGCCCCAGGCCCCGGGTGCACGTGGGGGCGCCGGTGCCCGGAT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS CCA 72 bp AGGAGCCCTTGGGGGCCCGGGAGTCGTCCGCGTCCATaGCGAGGAGGCCGAGGGGAGCCGCACGTCCGGGTG +
Preference number: 6 (lower is better)
Translates to: RSPWGPGSRPRP*RGGRGEPHVRV
Trigger: CACCCGGACGTGCGGCTCCCCTCGGCCTCCTCGCCATGGACGCGGACGACTCCCGGGCCCCCAAGGGCTCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS CAA 90 bp TTGCCGGCCCCGGAGAGGTGCTCCAGGAACTTCCGCAAGGAGCCCTaGGGGGCCCGGGAGTCGTCCGCGTCCATGGCGAGGAGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: LPAPERCSRNFRKEP*GARESSASMARRPR
Trigger: CCTCGGCCTCCTCGCCATGGACGCGGACGACTCCCGGGCCCCCAAGGGCTCCTTGCGGAAGTTCCTGGAGCACCTCTCCGGGGCCGGCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS CAA 72 bp CCGGAGAGGTGCTCCAGGAACTTCCGCAAGGAGCCCTaGGGGGCCCGGGAGTCGTCCGCGTCCATGGCGAGG +
Preference number: 6 (lower is better)
Translates to: PERCSRNFRKEP*GARESSASMAR
Trigger: CCTCGCCATGGACGCGGACGACTCCCGGGCCCCCAAGGGCTCCTTGCGGAAGTTCCTGGAGCACCTCTCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS CCA 72 bp CGGAGAGGTGCTCCAGGAACTTCCGCAAGGAGCCCTTaGGGGCCCGGGAGTCGTCCGCGTCCATGGCGAGGA +
Preference number: 6 (lower is better)
Translates to: RRGAPGTSARSP*GPGSRPRPWRG
Trigger: TCCTCGCCATGGACGCGGACGACTCCCGGGCCCCCAAGGGCTCCTTGCGGAAGTTCCTGGAGCACCTCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381125.9
CDS CCA 72 bp GCCGGCACCACACACAGGGGGATGCAAAGCTCCTGGTaGCGGCCTCGTGCCTCGGCCATGTCGCACGCACTC +
Preference number: 6 (lower is better)
Translates to: AGTTHRGMQSSW*RPRASAMSHAL
Trigger: GAGTGCGTGCGACATGGCCGAGGCACGAGGCCGCCACCAGGAGCTTTGCATCCCCCTGTGTGTGGTGCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413079.1
CDS CCA 72 bp GTGGCCGGCACCACACACAGGGGGATGCAAAGCTCCTaGTGGCGGCCTCGTGCCTCGGCCATGTCGCACGCA +
Preference number: 6 (lower is better)
Translates to: VAGTTHRGMQSS*WRPRASAMSHA
Trigger: TGCGTGCGACATGGCCGAGGCACGAGGCCGCCACCAGGAGCTTTGCATCCCCCTGTGTGTGGTGCCGGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413079.1
CDS TCA 72 bp CCCGCGTGCGGAAGGCCTGGCACCGCGCACTGCCAATaGTCGTCCCGCCCACTTGCAGGATGCTGGAGACAC +
Preference number: 6 (lower is better)
Translates to: PACGRPGTAHCQ*SSRPLAGCWRH
Trigger: GTGTCTCCAGCATCCTGCAAGTGGGCGGGACGATCATTGGCAGTGCGCGGTGCCAGGCCTTCCGCACGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000407806.2
ENST00000421751.1
ENST00000607886.5
ENST00000676796.1
ENST00000678206.1
CDS GCA 72 bp TCAAAACCCAGCTCGGGGCGCGCCGCGTCTCCAGCCTaGGCGATCGCTAAGGCTCCCAGGTTGCGTTCGCCT +
Preference number: 6 (lower is better)
Translates to: SKPSSGRAASPA*AIAKAPRLRSP
Trigger: AGGCGAACGCAACCTGGGAGCCTTAGCGATCGCGCAGGCTGGAGACGCGGCGCGCCCCGAGCTGGGTTTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676796.1
CDS CCA 72 bp GAAGGCCGCCGCACACAGCGGCACACAGCATCATCATaGGAGCTAGAGCACCGCCTTCCCTGCGCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: EGRRTQRHTASS*ELEHRLPCAGL
Trigger: CAGCCCCGCGCAGGGAAGGCGGTGCTCTAGCTCCCATGATGATGCTGTGTGCCGCTGTGTGCGGCGGCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS TCA 72 bp GTGTGCAGCAGCCAGGATGTGCCCTCGGAGTGGGTGTaGACGTGGTCCCCCGCAACCCCACCATGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: VCSSQDVPSEWV*TWSPATPPWQP
Trigger: TGGCTGCCATGGTGGGGTTGCGGGGGACCACGTTCACACCCACTCCGAGGGCACATCCTGGCTGCTGCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS TCA 72 bp CACCAGAGCATGCCGGCCAGGACAAGGGAAGCGGTGTaGCCAGCAGCCAGGCTTCTCCCTCCAGTCACCCCT +
Preference number: 6 (lower is better)
Translates to: HQSMPARTREAV*PAARLLPPVTP
Trigger: AGGGGTGACTGGAGGGAGAAGCCTGGCTGCTGGTCACACCGCTTCCCTTGTCCTGGCCGGCATGCTCTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678089.1
CDS CCA 72 bp TCAATGTTAAATATCCTCCCGGCGCGCCCGCGTCCGTaGGCCCAGCCTCGGGCCCCTCCTAGAGAGCAGCTT +
Preference number: 6 (lower is better)
Translates to: SMLNILPARPRP*AQPRAPPREQL
Trigger: AAGCTGCTCTCTAGGAGGGGCCCGAGGCTGGGCCCACGGACGCGGGCGCGCCGGGAGGATATTTAACATTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381075.7
ENST00000677351.1
ENST00000678206.1
CDS GCA 72 bp ACACAGGGGGATGCAAAGCTCCTGGTGGCGGCCTCGTaGCTCGGCCATGTCGCACGCACTCTTGTAAGCCTC +
Preference number: 6 (lower is better)
Translates to: TQGDAKLLVAAS*LGHVARTLVSL
Trigger: GAGGCTTACAAGAGTGCGTGCGACATGGCCGAGGCACGAGGCCGCCACCAGGAGCTTTGCATCCCCCTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413079.1
CDS GCA 72 bp ACAGCATCATCATGGGAGCTAGAGCACCGCCTTCCCTaGGCGGGGCTGGGACGAGGCTGGACAGGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: TASSWELEHRLP*AGLGRGWTGFR
Trigger: CCTGAAACCTGTCCAGCCTCGTCCCAGCCCCGCGCAGGGAAGGCGGTGCTCTAGCTCCCATGATGATGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS TCA 72 bp GCTGGAGACACTCTCCCAGTCGGCCTCTGCGATGTTTaGGCCTCCGTCCACCATGCCCTGGTAGCCCTCGTA +
Preference number: 6 (lower is better)
Translates to: AGDTLPVGLCDV*ASVHHALVALV
Trigger: TACGAGGGCTACCAGGGCATGGTGGACGGAGGCTCAAACATCGCAGAGGCCGACTGGGAGAGTGTCTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000407806.2
ENST00000421751.1
ENST00000607886.5
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS CCA 72 bp TGCACTGTGCGGTTGCCCATCCACAGCTTAACAGCCTaGTGCCAGTTACCCTGCGATGGGAGAGGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: CTVRLPIHSLTA*CQLPCDGRGGS
Trigger: GCTGCCCCCTCTCCCATCGCAGGGTAACTGGCACCAGGCTGTTAAGCTGTGGATGGGCAACCGCACAGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607886.5
CDS CAA 72 bp TGCTGGAGACACTCTCCCAGTCGGCCTCTGCGATGTTaGAGCCTCCGTCCACCATGCCCTGGTAGCCCTCGT +
Preference number: 6 (lower is better)
Translates to: CWRHSPSRPLRC*SLRPPCPGSPR
Trigger: ACGAGGGCTACCAGGGCATGGTGGACGGAGGCTCAAACATCGCAGAGGCCGACTGGGAGAGTGTCTCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000381075.7
ENST00000381125.9
ENST00000407806.2
ENST00000421751.1
ENST00000607886.5
ENST00000676796.1
ENST00000678089.1
ENST00000678206.1
CDS CAA 90 bp GACTCCTGCGAGGAAGGGGACTTGAGCCACCTCTGCGCTCTCCAGTaGCACGTTGGACACCTTCTGCCTGCCTGTGCCAGGACACACTCA +
Preference number: 6 (lower is better)
Translates to: DSCEEGDLSHLCALQ*HVGHLLPACARTHS
Trigger: TGAGTGTGTCCTGGCACAGGCAGGCAGAAGGTGTCCAACGTGCAACTGGAGAGCGCAGAGGTGGCTCAAGTCCCCTTCCTCGCAGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS TCA 72 bp ACGACCCCACAAGCCAGCTCACTCCACGCTGCTCTGTaGCTGTCCCTGCTGAAGCCGCTTTCACCGGACACA +
Preference number: 6 (lower is better)
Translates to: TTPQASSLHAAL*LSLLKPLSPDT
Trigger: TGTGTCCGGTGAAAGCGGCTTCAGCAGGGACAGTCACAGAGCAGCGTGGAGTGAGCTGGCTTGTGGGGTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS TCA 72 bp GCAGTAGCCTTCCAGACTCCTGCGAGGAAGGGGACTTaGGCCACCTCTGCGCTCTCCAGTTGCACGTTGGAC +
Preference number: 6 (lower is better)
Translates to: AVAFQTPARKGT*ATSALSSCTLD
Trigger: GTCCAACGTGCAACTGGAGAGCGCAGAGGTGGCTCAAGTCCCCTTCCTCGCAGGAGTCTGGAAGGCTACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS GCA 72 bp CCAGACTCCTGCGAGGAAGGGGACTTGAGCCACCTCTaGGCTCTCCAGTTGCACGTTGGACACCTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: PDSCEEGDLSHL*ALQLHVGHLLP
Trigger: AGGCAGAAGGTGTCCAACGTGCAACTGGAGAGCGCAGAGGTGGCTCAAGTCCCCTTCCTCGCAGGAGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS GCA 72 bp CAGGGCCAGGTACCTAACGCCAGGTATGAAGCGGGATaGCGGCCCCTTCAGGACTTTCCACGGGAGCATTCA +
Preference number: 6 (lower is better)
Translates to: QGQVPNARYEAG*RPLQDFPREHS
Trigger: TGAATGCTCCCGTGGAAAGTCCTGAAGGGGCCGGCATCCCGCTTCATACCTGGCGTTAGGTACCTGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460445.1
CDS CCA 72 bp GGACTTGAGCCACCTCTGCGCTCTCCAGTTGCACGTTaGACACCTTCTGCCTGCCTGTGCCAGGACACACTC +
Preference number: 6 (lower is better)
Translates to: GLEPPLRSPVAR*TPSACLCQDTL
Trigger: GAGTGTGTCCTGGCACAGGCAGGCAGAAGGTGTCCAACGTGCAACTGGAGAGCGCAGAGGTGGCTCAAGTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS CCA 72 bp GAGCACCGCCTTCCCTGCGCGGGGCTGGGACGAGGCTaGACAGGTTTCAGGAATTACTTAGGCAAGAGGCAT +
Preference number: 6 (lower is better)
Translates to: EHRLPCAGLGRG*TGFRNYLGKRH
Trigger: ATGCCTCTTGCCTAAGTAATTCCTGAAACCTGTCCAGCCTCGTCCCAGCCCCGCGCAGGGAAGGCGGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS CAA 72 bp ATGAACACGCGCCGCTTGGTTCCGCTGGCGGACTGCTaGATGCGGTCGCAGGTCTGGTCACAGAGAAGCGAT +
Preference number: 6 (lower is better)
Translates to: MNTRRLVPLADC*MRSQVWSQRSD
Trigger: ATCGCTTCTCTGTGACCAGACCTGCGACCGCATCAAGCAGTCCGCCAGCGGAACCAAGCGGCGCGTGTTCAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS CAA 90 bp GTCTCGATGATGAACACGCGCCGCTTGGTTCCGCTGGCGGACTGCTaGATGCGGTCGCAGGTCTGGTCACAGAGAAGCGATCAGTCACTC +
Preference number: 6 (lower is better)
Translates to: VSMMNTRRLVPLADC*MRSQVWSQRSDQSL
Trigger: GAGTGACTGATCGCTTCTCTGTGACCAGACCTGCGACCGCATCAAGCAGTCCGCCAGCGGAACCAAGCGGCGCGTGTTCATCATCGAGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS TCA 72 bp CCAGCTCACTCCACGCTGCTCTGTGACTGTCCCTGCTaGAGCCGCTTTCACCGGACACAGACACCGTTAGGT +
Preference number: 6 (lower is better)
Translates to: PAHSTLLCDCPC*SRFHRTQTPLG
Trigger: ACCTAACGGTGTCTGTGTCCGGTGAAAGCGGCTTCAGCAGGGACAGTCACAGAGCAGCGTGGAGTGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS GCA 72 bp GGAAAAGACGACCCCACAAGCCAGCTCACTCCACGCTaGTCTGTGACTGTCCCTGCTGAAGCCGCTTTCACC +
Preference number: 6 (lower is better)
Translates to: GKDDPTSQLTPR*SVTVPAEAAFT
Trigger: GGTGAAAGCGGCTTCAGCAGGGACAGTCACAGAGCAGCGTGGAGTGAGCTGGCTTGTGGGGTCGTCTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS GCA 72 bp TCCCAGATACCTTCTCTATTGGGCACAGTCGGCAGCTaGTGTCGACAGCCACGGCTGGATCTCTCCCACGGA +
Preference number: 6 (lower is better)
Translates to: SQIPSLLGTVGS*CRQPRLDLSHG
Trigger: TCCGTGGGAGAGATCCAGCCGTGGCTGTCGACAGCAGCTGCCGACTGTGCCCAATAGAGAAGGTATCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS GCA 72 bp ACATGGCTTAGAAAGCAGACAGGGGAAACCTGCCAGTaGTCAGAAGGCCGCCGCACACAGCGGCACACAGCA +
Preference number: 6 (lower is better)
Translates to: TWLRKQTGETCQ*SEGRRTQRHTA
Trigger: TGCTGTGTGCCGCTGTGTGCGGCGGCCTTCTGAGCACTGGCAGGTTTCCCCTGTCTGCTTTCTAAGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS GCA 72 bp AGGGAAACATGGCTTAGAAAGCAGACAGGGGAAACCTaGCAGTGCTCAGAAGGCCGCCGCACACAGCGGCAC +
Preference number: 6 (lower is better)
Translates to: RETWLRKQTGET*QCSEGRRTQRH
Trigger: GTGCCGCTGTGTGCGGCGGCCTTCTGAGCACTGGCAGGTTTCCCCTGTCTGCTTTCTAAGCCATGTTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS CAA 72 bp ATGAACACGCGCCGCTTGGTTCCGCTGGCGGACTGCTaGATGCGGTCGCAGGTCTCAACAACAGCATTCAGG +
Preference number: 6 (lower is better)
Translates to: MNTRRLVPLADC*MRSQVSTTAFR
Trigger: CCTGAATGCTGTTGTTGAGACCTGCGACCGCATCAAGCAGTCCGCCAGCGGAACCAAGCGGCGCGTGTTCAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413079.1
CDS CAA 72 bp TGCAGTAGCCTTCCAGACTCCTGCGAGGAAGGGGACTaGAGCCACCTCTGCGCTCTCCAGTTGCACGTTGGA +
Preference number: 6 (lower is better)
Translates to: CSSLPDSCEEGD*SHLCALQLHVG
Trigger: TCCAACGTGCAACTGGAGAGCGCAGAGGTGGCTCAAGTCCCCTTCCTCGCAGGAGTCTGGAAGGCTACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS CAA 90 bp CAAACGCTATGCAGTAGCCTTCCAGACTCCTGCGAGGAAGGGGACTaGAGCCACCTCTGCGCTCTCCAGTTGCACGTTGGACACCTTCTG +
Preference number: 6 (lower is better)
Translates to: QTLCSSLPDSCEEGD*SHLCALQLHVGHLL
Trigger: CAGAAGGTGTCCAACGTGCAACTGGAGAGCGCAGAGGTGGCTCAAGTCCCCTTCCTCGCAGGAGTCTGGAAGGCTACTGCATAGCGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS GCA 72 bp GACCCAAGCTCGGCGGGGAGAAAAATGGCAAAGAAATaGATCGGCCGCCTTCCCACCCATACATCAGTCCGG +
Preference number: 6 (lower is better)
Translates to: DPSSAGRKMAKK*IGRLPTHTSVR
Trigger: CCGGACTGATGTATGGGTGGGAAGGCGGCCGATGCATTTCTTTGCCATTTTTCTCCCCGCCGAGCTTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS GCA 72 bp CTAAGGCAAACGCTATGCAGTAGCCTTCCAGACTCCTaGGAGGAAGGGGACTTGAGCCACCTCTGCGCTCTC +
Preference number: 6 (lower is better)
Translates to: LRQTLCSSLPDS*EEGDLSHLCAL
Trigger: GAGAGCGCAGAGGTGGCTCAAGTCCCCTTCCTCGCAGGAGTCTGGAAGGCTACTGCATAGCGTTTGCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415005.6
CDS GCA 72 bp GGGAGTGTCCACCAGACGGGAGTTCACCGCGGCGGCTaGATGGAAACCGTCTCAAAATCCGTTTGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: GSVHQTGVHRGG*METVSKSVCFF
Trigger: GAAGAAGCAAACGGATTTTGAGACGGTTTCCATGCAGCCGCCGCGGTGAACTCCCGTCTGGTGGACACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433193.2
CDS TCA 72 bp GGATCCCAGAGTGAAATGTCTGCCATCCGCCCTCCATaGGGACCCAAGCTCGGCGGGGAGAAAAATGGCAAA +
Preference number: 6 (lower is better)
Translates to: GSQSEMSAIRPP*GPKLGGEKNGK
Trigger: TTTGCCATTTTTCTCCCCGCCGAGCTTGGGTCCTCATGGAGGGCGGATGGCAGACATTTCACTCTGGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS CCA 72 bp CTCAAAGGCAGATGGTGGTTCTTAGACCCAGGCACCTaGGGAAGTCTTCCAGATGCACAGGCATCGGATCCC +
Preference number: 6 (lower is better)
Translates to: LKGRWWFLDPGT*GSLPDAQASDP
Trigger: GGGATCCGATGCCTGTGCATCTGGAAGACTTCCCCAGGTGCCTGGGTCTAAGAACCACCATCTGCCTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS TCA 72 bp GAAGTCTTCCAGATGCACAGGCATCGGATCCCAGAGTaGAATGTCTGCCATCCGCCCTCCATGAGGACCCAA +
Preference number: 6 (lower is better)
Translates to: EVFQMHRHRIPE*NVCHPPSMRTQ
Trigger: TTGGGTCCTCATGGAGGGCGGATGGCAGACATTTCACTCTGGGATCCGATGCCTGTGCATCTGGAAGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS TCA 72 bp CGCTTTCACCGGACACAGACACCGTTAGGTGTTAGCTaGGATGTTAGGGGACTGTCCCCTGCCAGCTTAGTC +
Preference number: 6 (lower is better)
Translates to: RFHRTQTPLGVS*DVRGLSPASLV
Trigger: GACTAAGCTGGCAGGGGACAGTCCCCTAACATCTCAGCTAACACCTAACGGTGTCTGTGTCCGGTGAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS CAA 72 bp GGACGGCAGCGTTCATACATCCAATGCACTGTGCGGTaGCCCATCCACAGCTTAACAGCCTGGTGCCAGTTA +
Preference number: 6 (lower is better)
Translates to: GRQRSYIQCTVR*PIHSLTAWCQL
Trigger: TAACTGGCACCAGGCTGTTAAGCTGTGGATGGGCAACCGCACAGTGCATTGGATGTATGAACGCTGCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607886.5
CDS TCA 72 bp TTCCATCTACTCATGAGACTGAGGCAGAAAATTGCTTaGACCCAGCAGGTTGCAGTGAGCCAAGATCGTGCC +
Preference number: 6 (lower is better)
Translates to: FHLLMRLRQKIA*TQQVAVSQDRA
Trigger: GGCACGATCTTGGCTCACTGCAACCTGCTGGGTTCAAGCAATTTTCTGCCTCAGTCTCATGAGTAGATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS CAA 72 bp ATTCCATCTACTCATGAGACTGAGGCAGAAAATTGCTaGAACCCAGCAGGTTGCAGTGAGCCAAGATCGTGC +
Preference number: 6 (lower is better)
Translates to: IPSTHETEAENC*NPAGCSEPRSC
Trigger: GCACGATCTTGGCTCACTGCAACCTGCTGGGTTCAAGCAATTTTCTGCCTCAGTCTCATGAGTAGATGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS CCA 72 bp AATGTTACATTTATGGAAACTCTACTCAAAGGCAGATaGTGGTTCTTAGACCCAGGCACCTGGGGAAGTCTT +
Preference number: 6 (lower is better)
Translates to: NVTFMETLLKGR*WFLDPGTWGSL
Trigger: AAGACTTCCCCAGGTGCCTGGGTCTAAGAACCACCATCTGCCTTTGAGTAGAGTTTCCATAAATGTAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS CCA 72 bp CCTGTGATTTTAGAGGTGCGGCCATCTTCCATCCATTaGCGAATGTTACATTTATGGAAACTCTACTCAAAG +
Preference number: 6 (lower is better)
Translates to: PVILEVRPSSIH*RMLHLWKLYSK
Trigger: CTTTGAGTAGAGTTTCCATAAATGTAACATTCGCCAATGGATGGAAGATGGCCGCACCTCTAAAATCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS CAA 72 bp CCCTGTGATTTTAGAGGTGCGGCCATCTTCCATCCATaGGCGAATGTTACATTTATGGAAACTCTACTCAAA +
Preference number: 6 (lower is better)
Translates to: PCDFRGAAIFHP*ANVTFMETLLK
Trigger: TTTGAGTAGAGTTTCCATAAATGTAACATTCGCCAATGGATGGAAGATGGCCGCACCTCTAAAATCACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381072.5
CDS CAA 72 bp TTGGTGCCTTCCTTTCAAATACTTTTTAGTCTTAAGTaGCCAGGACTTCAAAAGTGGCAGACAGGGAGTCAC +
Preference number: 6 (lower is better)
Translates to: LVPSFQILFSLK*PGLQKWQTGSH
Trigger: GTGACTCCCTGTCTGCCACTTTTGAAGTCCTGGCAACTTAAGACTAAAAAGTATTTGAAAGGAAGGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS CAA 72 bp ATAAATGATGAGACATCAATTCAACAAGACAGTATGTaGACATTTAAAGCAACAGTTGGCTGGGCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: INDETSIQQDSM*TFKATVGWARR
Trigger: CCGCCGCGCCCAGCCAACTGTTGCTTTAAATGTCAACATACTGTCTTGTTGAATTGATGTCTCATCATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677351.1
CDS CAA 90 bp CAAACTCTATTGGTGCCTTCCTTTCAAATACTTTTTAGTCTTAAGTaGCCAGGACTTCAAAAGTGGCAGACAGGGAGTCACTCCTGCTAT +
Preference number: 6 (lower is better)
Translates to: QTLLVPSFQILFSLK*PGLQKWQTGSHSCY
Trigger: ATAGCAGGAGTGACTCCCTGTCTGCCACTTTTGAAGTCCTGGCAACTTAAGACTAAAAAGTATTTGAAAGGAAGGCACCAATAGAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677351.1