RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PFKL (Homo sapiens)

Ensembl gene IDs: ENSG00000141959

Ensembl transcript IDs: ENST00000349048.9, ENST00000397961.6, ENST00000460020.5, ENST00000460521.5, ENST00000466134.5, ENST00000467315.5, ENST00000474114.5, ENST00000495274.1, ENST00000496824.5, ENST00000498841.5

Found 442 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATaGCAGCCGCCGGGGCCCCCACATTCAGGATGGCCAGGGAGAAGT +
Preference number: 1 (lower is better)
Translates to: HGRCRSAPPSARPHS*QPPGPPHSGWPGRS
Trigger: ACTTCTCCCTGGCCATCCTGAATGTGGGGGCCCCGGCGGCTGGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR TCA 90 bp TCCGCTCTCCAGCTTGGCGTGGGGCTCAGCAGCAGGGAGCAGGTGTaGGGTGAGGTGCCACGCCTCTGGCAGGCAGCAGCTGAGGCAGGG +
Preference number: 1 (lower is better)
Translates to: SALQLGVGLSSREQV*GEVPRLWQAAAEAG
Trigger: CCCTGCCTCAGCTGCTGCCTGCCAGAGGCGTGGCACCTCACCTCACACCTGCTCCCTGCTGCTGAGCCCCACGCCAAGCTGGAGAGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 90 bp GGCGTGGGCATGGCTGGCCTCAGAAGCCCTTGTCCATGCTCAGGGTaGGGCGGGTCACGTGCTCCAGCTCCCCTGACACGTAGGCGGCCA +
Preference number: 1 (lower is better)
Translates to: GVGMAGLRSPCPCSG*GGSRAPAPLTRRRP
Trigger: TGGCCGCCTACGTGTCAGGGGAGCTGGAGCACGTGACCCGCCGCACCCTGAGCATGGACAAGGGCTTCTGAGGCCAGCCATGCCCACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 90 bp GAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTaGCAGGTGGCCAGGGATAGAGGCAGGGGATGGGCTGAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: EGLAGWSQDTSPREA*QVARDRGRGWAEQG
Trigger: TCCCTGCTCAGCCCATCCCCTGCCTCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR CCA 90 bp CCCTGGGCAGGAAGGTGGATGCCCCAGGGCACTCTGTCCTCCTGCTaGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGG +
Preference number: 1 (lower is better)
Translates to: PWAGRWMPQGTLSSC*RAWQAGLKTPARGR
Trigger: CCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGACAGAGTGCCCTGGGGCATCCACCTTCCTGCCCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR CCA 90 bp GCAGGAGCAGCGCACCCAGGCCACCGTCCAACCACAGGGCCTCTCTaGTCTCCCCAGCTCCAGGCGGAGTCAATGTGCCACTGGGCGGGT +
Preference number: 1 (lower is better)
Translates to: AGAAHPGHRPTTGPL*SPQLQAESMCHWAG
Trigger: ACCCGCCCAGTGGCACATTGACTCCGCCTGGAGCTGGGGAGACCAGAGAGGCCCTGTGGTTGGACGGTGGCCTGGGTGCGCTGCTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 90 bp TTGCTGCTCAGGATCCGGTCGAAGGCAGAGGGCGTCCCTCCCCGCTaGACGTGGCCCAGCACAGTTACACGGGTGTCGAAGCCCAGCCTC +
Preference number: 1 (lower is better)
Translates to: LLLRIRSKAEGVPPR*TWPSTVTRVSKPSL
Trigger: GAGGCTGGGCTTCGACACCCGTGTAACTGTGCTGGGCCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCTGAGCAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 90 bp CTTCGAAGCCATCGTGCACCACGTATACTGTGTGTCCATGGGAGATaGCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCAGCCG +
Preference number: 1 (lower is better)
Translates to: LRSHRAPRILCVHGR*RSAPPSARPHSCQP
Trigger: CGGCTGGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACACACAGTATACGTGGTGCACGATGGCTTCGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 90 bp GAAGGCCACCGCCTTCTTCTTCAGGCCGATCACGCAGGCCGAGTCTaGGGCATTGGCGAACACCCGTCCCTTGCGGTAAACCTCGCGCAG +
Preference number: 1 (lower is better)
Translates to: EGHRLLLQADHAGRV*GIGEHPSLAVNLAQ
Trigger: CTGCGCGAGGTTTACCGCAAGGGACGGGTGTTCGCCAATGCCCCAGACTCGGCCTGCGTGATCGGCCTGAAGAAGAAGGCGGTGGCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 90 bp GCTAGGCCTTCGAAGCCATCGTGCACCACGTATACTGTGTGTCCATaGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATG +
Preference number: 1 (lower is better)
Translates to: ARPSKPSCTTYTVCP*EMPVRTAERTAAFM
Trigger: CATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACACACAGTATACGTGGTGCACGATGGCTTCGAAGGCCTAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 90 bp GGAGACCCCCACGAGAGGACTCTCGACCTCTACCCTGGTTACACATaGTTCTCATCCGCTCTCCAGCTTGGCGTGGGGCTCAGCAGCAGG +
Preference number: 1 (lower is better)
Translates to: GDPHERTLDLYPGYT*FSSALQLGVGLSSR
Trigger: CCTGCTGCTGAGCCCCACGCCAAGCTGGAGAGCGGATGAGAAGCATGTGTAACCAGGGTAGAGGTCGAGAGTCCTCTCGTGGGGGTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR TCA 90 bp CTTGTCCATGCTCAGGGTGCGGCGGGTCACGTGCTCCAGCTCCCCTaGCACGTAGGCGGCCATACTGATGCGGTATTGTGCCAGCATCTT +
Preference number: 1 (lower is better)
Translates to: LVHAQGAAGHVLQLP*HVGGHTDAVLCQHL
Trigger: AAGATGCTGGCACAATACCGCATCAGTATGGCCGCCTACGTGTCAGGGGAGCTGGAGCACGTGACCCGCCGCACCCTGAGCATGGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 90 bp GTCCCTTGCGGTAAACCTCGCGCAGCTTCTCCGACAACCACAGCATaGCCTTCACCCCCAGCTTGGTCCCATAGTTCCGGTCAAAGGGGG +
Preference number: 1 (lower is better)
Translates to: VPCGKPRAASPTTTA*PSPPAWSHSSGQRG
Trigger: CCCCCTTTGACCGGAACTATGGGACCAAGCTGGGGGTGAAGGCCATGCTGTGGTTGTCGGAGAAGCTGCGCGAGGTTTACCGCAAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 90 bp AGGCCTCAAACCCACCGACCACCAGCAGGGCGTGAATACCATAGATaGGGATGTTCTCCACAATGGACTCCAGCTGGCCCTTGGGCAGGG +
Preference number: 1 (lower is better)
Translates to: RPQTHRPPAGREYHR*GCSPQWTPAGPWAG
Trigger: CCCTGCCCAAGGGCCAGCTGGAGTCCATTGTGGAGAACATCCGCATCTATGGTATTCACGCCCTGCTGGTGGTCGGTGGGTTTGAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 90 bp CCACCAGCAGGGCGTGAATACCATAGATGCGGATGTTCTCCACAATaGACTCCAGCTGGCCCTTGGGCAGGGTCCTCTTGGTCCCCAGCA +
Preference number: 1 (lower is better)
Translates to: PPAGREYHRCGCSPQ*TPAGPWAGSSWSPA
Trigger: TGCTGGGGACCAAGAGGACCCTGCCCAAGGGCCAGCTGGAGTCCATTGTGGAGAACATCCGCATCTATGGTATTCACGCCCTGCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR TCA 90 bp GAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCAGCCCAGGCCCCATCTaGGCCCTGGCGCTGCGCTGG +
Preference number: 2 (lower is better)
Translates to: EGPWGAKARGQQPPNTDSSPGPI*ALALRW
Trigger: CCAGCGCAGCGCCAGGGCTCAGATGGGGCCTGGGCT...GCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR GCA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCAGCACGGCCGCATTCATaGCAGCCGCCGGGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPARPHS*QPPGPP
Trigger: TGGGGGCCCCGGCGGCTGGCATGAATGCGGCCGTGC...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR TCA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACAGGCAGGGGATGGGCTaGGCAGGGACGCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHRQGMG*AGTQPP
Trigger: TGGGGGCTGCGTCCCTGCTCAGCCCATCCCCTGCCT...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR TCA 90 bp CAGTCGGCCCCTGAGGCCAGTGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGAGGCAGGGGATGGGCTaGGCAGGGACGCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: QSAPEASADTSARYPQCRRQGMG*AGTQPP
Trigger: TGGGGGCTGCGTCCCTGCTCAGCCCATCCCCTGCCT...CCGGCACTGCGGGTACCTGGCGCTGGTATCTGCACTGGCCTCAGGGGCCGACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp GTGTCCATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCGGGAGGCCTGGCAGGTaGCCAGGGATAGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: VSMGDAGPHRRAHGRIHAGRPGR*PGIEAG
Trigger: CCCTGCCTCTATCCCTGGCCACCTGCCAGGCCTCCC...GGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACAGCGCCACGTCCCCTaGGCAGGAAGGTGGATGCCC +
Preference number: 2 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPQRHVP*AGRWMP
Trigger: GGGCATCCACCTTCCTGCCCAGGGGACGTGGCGCTG...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR CCA 90 bp GACGCTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCCCCTGGGCAGGAAGGTaGATGCCCCAGGGCACTCTG +
Preference number: 2 (lower is better)
Translates to: DAEGPWGAKARGQQPPNTPWAGR*MPQGTL
Trigger: CAGAGTGCCCTGGGGCATCCACCTTCCTGCCCAGGG...GGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR TCA 90 bp CGCCGGGGCCCCCACATTCAGGATGGCCAGGGAGAAGTTAGACTTCTCCTTGGGAGCCCAGGCCCCATCTaGGCCCTGGCGCTGCGCTGG +
Preference number: 2 (lower is better)
Translates to: RRGPHIQDGQGEVRLLLGSPGPI*ALALRW
Trigger: CCAGCGCAGCGCCAGGGCTCAGATGGGGCCTGGGCT...CCCAAGGAGAAGTCTAACTTCTCCCTGGCCATCCTGAATGTGGGGGCCCCGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR GCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGACGCAGCCCCCACCTaGCTGCAGGCTCCAGACACA +
Preference number: 2 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQDAAPT*LQAPDT
Trigger: TGTGTCTGGAGCCTGCAGGCAGGTGGGGGCTGCGTC...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR GCA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCAGGGCAGGAAGGTGGATaGCCCAGGGCACTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPGQEGG*PRALCP
Trigger: AGGACAGAGTGCCCTGGGGCATCCACCTTCCTGCCC...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR GCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTCAGGTTGTAGGCCGCTaGCCGGCGCCCCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDAQVVGR*PAPLPG
Trigger: ACCAGGGAGGGGCGCCGGGCAGCGGCCTACAACCTG...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGGATAGAGGCAGGGGATaGGCTGAGCAGGGACGCAGC +
Preference number: 2 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKDRGRG*AEQGRS
Trigger: GCTGCGTCCCTGCTCAGCCCATCCCCTGCCTCTATC...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR GCA 90 bp GTGTCCATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCTCTTTCCTGTCCCCTTaGCCTCGGCTCCCAGGACTG +
Preference number: 2 (lower is better)
Translates to: VSMGDAGPHRRAHGRIHASFLSP*PRLPGL
Trigger: CAGTCCTGGGAGCCGAGGGCAAGGGGACAGGAAAGA...GGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR GCA 90 bp GAAGTTCTCCCAGCCGTCCTCGGGTGGAGCCTCGGGGATGAACAGCCAGTCGGCGCCAGGTACCCGCAGTaGCGGCCCATCACTTCCAGC +
Preference number: 2 (lower is better)
Translates to: EVLPAVLGWSLGDEQPVGARYPQ*RPITSS
Trigger: GCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGC...GCCGACTGGCTGTTCATCCCCGAGGCTCCACCCGAGGACGGCTGGGAGAACTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGATAGAGGCAGGGGATaGGCTGAGCAGGGACGCAGC +
Preference number: 2 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQDRGRG*AEQGRS
Trigger: GCTGCGTCCCTGCTCAGCCCATCCCCTGCCTCTATC...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR CCA 90 bp TGCTGCTCAGGATCCGGTCGAAGGCAGAGGGCGTCCCTCCCCGCTGCACGTGGCGACAGGTGCTGCACGTaGGCAGGAGCAGGTCACAGT +
Preference number: 2 (lower is better)
Translates to: CCSGSGRRQRASLPAARGDRCCT*AGAGHS
Trigger: ACTGTGACCTGCTCCTGCCCACGTGCAGCACCTGTC...GCCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCTGAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCAACGAAGGTCCTCTGGTaGCTCTGGGCAGTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPTKVLW*LWAVVV
Trigger: CACCACCACTGCCCAGAGCCACCAGAGGACCTTCGT...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp CAGCGCCATCACCGCCTCCATGCCCATCTTGCTGCTCAGGATCCGGTCGAAGGCAGCCCGAGGGAGGCCTaGCAGGTGGCCAGGGATAGA +
Preference number: 2 (lower is better)
Translates to: QRHHRLHAHLAAQDPVEGSPREA*QVARDR
Trigger: TCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCT...GCCTTCGACCGGATCCTGAGCAGCAAGATGGGCATGGAGGCGGTGATGGCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp CAGCGCCATCACCGCCTCCATGCCCATCTTGCTGCTCAGGATCCGGTCGAAGGCGAGGGCCTGGCAGGCTaGTCTCAAGACACCAGCCCG +
Preference number: 2 (lower is better)
Translates to: QRHHRLHAHLAAQDPVEGEGLAG*SQDTSP
Trigger: CGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTC...GCCTTCGACCGGATCCTGAGCAGCAAGATGGGCATGGAGGCGGTGATGGCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp GAAGTTCTCCCAGCCGTCCTCGGGTGGAGCCTCGGGGATGAACAGCCAGTCGGCATCCGCTCTCCAGCTTaGCGTGGGGCTCAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: EVLPAVLGWSLGDEQPVGIRSPA*RGAQQQ
Trigger: CTGCTGCTGAGCCCCACGCCAAGCTGGAGAGCGGAT...GCCGACTGGCTGTTCATCCCCGAGGCTCCACCCGAGGACGGCTGGGAGAACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp ATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCAGCCGCAGAAGTCGTTATCGATaGAGCCCACTAGGCCCGCGA +
Preference number: 2 (lower is better)
Translates to: MGDAGPHRRAHGRIHASRRSRYR*SPLGPR
Trigger: TCGCGGGCCTAGTGGGCTCCATCGATAACGACTTCT...GCGGCTGGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR GCA 90 bp TGGTCCCATAGTTCCGGTCAAAGGGGGTTGGAGCGCCACCCTGCTGCAGGTGGCAGGTGTGAGGTGAGGTaGCACGCCTCTGGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: WSHSSGQRGLERHPAAGGRCEVR*HASGRQ
Trigger: CTGCCTGCCAGAGGCGTGGCACCTCACCTCACACCT...GCCACCTGCAGCAGGGTGGCGCTCCAACCCCCTTTGACCGGAACTATGGGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp CTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGTAGAGCAAGGGCTGAGCCCGAGGGAGGCCTaGCAGGTGGCCAGGGATAGA +
Preference number: 2 (lower is better)
Translates to: LSTQPRRQQPTGQVEQGLSPREA*QVARDR
Trigger: TCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCT...CAGCCCTTGCTCTACCTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR CCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTCCACCCTGCTGCAGGTaGCCCAGGACATTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDAPPCCR*PRTLVL
Trigger: CAGGACCAATGTCCTGGGCCACCTGCAGCAGGGTGG...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTTCCTGCTGGAGGGCCTaGCAGGCTGGTCTCAAGACA +
Preference number: 2 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDASCWRA*QAGLKT
Trigger: TGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGA...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR TCA 90 bp CAGCGCCATCACCGCCTCCATGCCCATCTTGCTGCTCAGGATCCGGTCGAAGGCCCAGCCTCTCACACATaGAGTTCTCCCAGCCGTCCT +
Preference number: 2 (lower is better)
Translates to: QRHHRLHAHLAAQDPVEGPASHT*SSPSRP
Trigger: AGGACGGCTGGGAGAACTTCATGTGTGAGAGGCTGG...GCCTTCGACCGGATCCTGAGCAGCAAGATGGGCATGGAGGCGGTGATGGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp TACCGGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGATCCTGCTGGAGGGCCTaGCAGGCTGGTCTCAAGACA +
Preference number: 2 (lower is better)
Translates to: YRPGRARAGPCSEPSMGRSCWRA*QAGLKT
Trigger: TGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGA...TCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCCGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR CCA 90 bp CGCCGGGGCCCCCACATTCAGGATGGCCAGGGAGAAGTTAGACTTCTCCTTGGGGTCCTCTGGTGGCTCTaGGCAGTGGTGGTGATGGCA +
Preference number: 2 (lower is better)
Translates to: RRGPHIQDGQGEVRLLLGVLWWL*AVVVMA
Trigger: TGCCATCACCACCACTGCCCAGAGCCACCAGAGGAC...CCCAAGGAGAAGTCTAACTTCTCCCTGGCCATCCTGAATGTGGGGGCCCCGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CAA 90 bp TCGACCTCTACCCTGGTTACACATGCTTCTCATCCGCTCTCCAGCTaGGCGTGGGGCTCAGCAGCAGGGAGCAGGTGTGAGGTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: STSTLVTHASHPLSS*AWGSAAGSRCEVRC
Trigger: GCACCTCACCTCACACCTGCTCCCTGCTGCTGAGCCCCACGCCAAGCTGGAGAGCGGATGAGAAGCATGTGTAACCAGGGTAGAGGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR TCA 90 bp AGCCACCACGCCCCAACCAGCCGGCCACGTCGTGCCAGCCTACTTCTTGCACCTCTCCCAGGACTGCAGTaGAAGAAACAGTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: SHHAPTSRPRRASLLLAPLPGLQ*KKQSVP
Trigger: TGGGACAGACTGTTTCTTTCACTGCAGTCCTGGGAG...AGGTGCAAGAAGTAGGCTGGCACGACGTGGCCGGCTGGTTGGGGCGTGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR TCA 90 bp CGCCGGGGCCCCCACATTCAGGATGGCCAGGGAGAAGTTAGACTTCTCCTTGGGCCGGGCTGTAGTCTCTaGGATCTTACCTTCCGCCAC +
Preference number: 2 (lower is better)
Translates to: RRGPHIQDGQGEVRLLLGPGCSL*DLTFRH
Trigger: GTGGCGGAAGGTAAGATCTCAGAGACTACAGCCCGG...CCCAAGGAGAAGTCTAACTTCTCCCTGGCCATCCTGAATGTGGGGGCCCCGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR GCA 90 bp CCAGCACAGTTACACGGGTGTCGAAGCCCAGCCTCTGAACCACCAGGTCCTTCAGGCTGCCCCACTCGCTaGGGAAGATGTTGGCACCTG +
Preference number: 2 (lower is better)
Translates to: PAQLHGCRSPASEPPGPSGCPTR*GRCWHL
Trigger: CAGGTGCCAACATCTTCCGCAGCGAGTGGGGCAGCC...TGAAGGACCTGGTGGTTCAGAGGCTGGGCTTCGACACCCGTGTAACTGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp AGCAGGCTGCCCCACTCGCTGCGGAAGATGTTGGCACCTGTGAGGCTGCCATCCATAGTGCCGCCCAGCTaGATGATGTTGGAGACGCTC +
Preference number: 2 (lower is better)
Translates to: SRLPHSLRKMLAPVRLPSIVPPS*MMLETL
Trigger: GAGCGTCTCCAACATCATCCAGCTGGGCGGCACTAT...GGATGGCAGCCTCACAGGTGCCAACATCTTCCGCAGCGAGTGGGGCAGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR TCA 90 bp CGAGAGGACTCTCGACCTCTACCCTGGTTACACATGCTTCTCATCCGCTCTCCAAGCAGGGAGCAGGTGTaGGGTGAGGTGCCACGCCTC +
Preference number: 2 (lower is better)
Translates to: REDSRPLPWLHMLLIRSPSREQV*GEVPRL
Trigger: GAGGCGTGGCACCTCACCTCACACCTGCTCCCTGCT...TGGAGAGCGGATGAGAAGCATGTGTAACCAGGGTAGAGGTCGAGAGTCCTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR GCA 90 bp GAAGTTCTCCCAGCCGTCCTCGGGTGGAGCCTCGGGGATGAACAGCCAGTCGGCTACCCTGGTTACACATaGTTCTCATCCGCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: EVLPAVLGWSLGDEQPVGYPGYT*FSSALQ
Trigger: CTGGAGAGCGGATGAGAAGCATGTGTAACCAGGGTA...GCCGACTGGCTGTTCATCCCCGAGGCTCCACCCGAGGACGGCTGGGAGAACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp AGCCACCACGCCCCAACCAGCCGGCCACGTCGTGCCAGCCTACTTCTTGCACCTCTTTCTGCACTTCCTTaGTCATCTGCACGCACTCCA +
Preference number: 2 (lower is better)
Translates to: SHHAPTSRPRRASLLLAPLSALP*SSARTP
Trigger: TGGAGTGCGTGCAGATGACCAAGGAAGTGCAGAAAG...AGGTGCAAGAAGTAGGCTGGCACGACGTGGCCGGCTGGTTGGGGCGTGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR TCA 90 bp GGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGGCCAGGGATAGAGGCATTAAGTCGTGGATGTTaGAAGGGTCCTCGAAGACGT +
Preference number: 2 (lower is better)
Translates to: GLKTPARGRPGRWPGIEALSRGC*KGPRRR
Trigger: ACGTCTTCGAGGACCCTTTCAACATCCACGACTTAA...TGCCTCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTGACGCTGAGGGCCCATaGGGCGCCAAAGCCAGGGGG +
Preference number: 2 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGDAEGP*GAKARG
Trigger: CCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR CCA 90 bp AGCCACCACGCCCCAACCAGCCGGCCACGTCGTGCCAGCCTACTTCTTGCACCTTCTCGACCTCTACCCTaGTTACACATGCTTCTCATC +
Preference number: 2 (lower is better)
Translates to: SHHAPTSRPRRASLLLAPSRPLP*LHMLLI
Trigger: GATGAGAAGCATGTGTAACCAGGGTAGAGGTCGAGA...AGGTGCAAGAAGTAGGCTGGCACGACGTGGCCGGCTGGTTGGGGCGTGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR GCA 90 bp GTGCCAGGGACGTTGTTGCTGATGGTGGCTGGGATGACACACATGACGATGCAGAGATGGGCTTCCCGTTaGGGTCAATGGCACCCTCAG +
Preference number: 2 (lower is better)
Translates to: VPGTLLLMVAGMTHMTMQRWASR*GQWHPQ
Trigger: CTGAGGGTGCCATTGACCGCAACGGGAAGCCCATCT...CTGCATCGTCATGTGTGTCATCCCAGCCACCATCAGCAACAACGTCCCTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTCAGCGCCACGTCCCCTaGGCAGGAAGGTGGATGCCC +
Preference number: 2 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGQRHVP*AGRWMP
Trigger: GGGCATCCACCTTCCTGCCCAGGGGACGTGGCGCTG...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR GCA 90 bp CAGGGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGACGCAGCCCCCACCTaGCTGCAGGCTCCAGACACA +
Preference number: 2 (lower is better)
Translates to: QGDFISRKGDRCCTWAGADAAPT*LQAPDT
Trigger: TGTGTCTGGAGCCTGCAGGCAGGTGGGGGCTGCGTC...TGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR GCA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTCAGGCGGAGTCAATGTaGCACTGGGCGGGTCAGCCC +
Preference number: 2 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGQAESM*HWAGQP
Trigger: GGGCTGACCCGCCCAGTGGCACATTGACTCCGCCTG...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CCA 90 bp CAGGGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGAGGGCCTGGCAGGCTaGTCTCAAGACACCAGCCCG +
Preference number: 2 (lower is better)
Translates to: QGDFISRKGDRCCTWAGAEGLAG*SQDTSP
Trigger: CGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTC...TGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR GCA 90 bp CAGGGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGGCAGGAAGGTGGATaGCCCAGGGCACTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: QGDFISRKGDRCCTWAGAGQEGG*PRALCP
Trigger: AGGACAGAGTGCCCTGGGGCATCCACCTTCCTGCCC...TGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR CCA 90 bp GCTTCTCCGACAACCACAGCATGGCCTTCACCCCCAGCTTGGTCCCATAGTTCCTGTACAGGAACTCCGTaGTGTAGTAGTCATGGCACT +
Preference number: 2 (lower is better)
Translates to: ASPTTTAWPSPPAWSHSSCTGTP*CSSHGT
Trigger: AGTGCCATGACTACTACACCACGGAGTTCCTGTACA...GGAACTATGGGACCAAGCTGGGGGTGAAGGCCATGCTGTGGTTGTCGGAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR GCA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTGCAAAGCCAGTTTCCTaGTGGGGGCTCCTGCTCAAG +
Preference number: 2 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGAKPVS*WGLLLK
Trigger: CTTGAGCAGGAGCCCCCAGCAGGAAACTGGCTTTGC...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 72 bp TGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATaGCAGCCGCCGGGGCCCCCACATTCAGGATGGCCA +
Preference number: 3 (lower is better)
Translates to: CRSAPPSARPHS*QPPGPPHSGWP
Trigger: TGGCCATCCTGAATGTGGGGGCCCCGGCGGCTGGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CAA 90 bp ATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCAGCCGCCCGATGACGCACAGGTaGGTGATGCCGTGCTGGACC +
Preference number: 3 (lower is better)
Translates to: MGDAGPHRRAHGRIHASRPMTHR*VMPCWT
Trigger: GGTCCAGCACGGCATCACCAACCTGTGCGTCATCGG...GCGGCTGGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 72 bp GGCGTGGGCATGGCTGGCCTCAGAAGCCCTTGTCCATaGTCAGGGTGCGGCGGGTCACGTGCTCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: GVGMAGLRSPCP*SGCGGSRAPAP
Trigger: GGGAGCTGGAGCACGTGACCCGCCGCACCCTGAGCATGGACAAGGGCTTCTGAGGCCAGCCATGCCCACGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR TCA 72 bp CAGCTTGGCGTGGGGCTCAGCAGCAGGGAGCAGGTGTaGGGTGAGGTGCCACGCCTCTGGCAGGCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: QLGVGLSSREQV*GEVPRLWQAAA
Trigger: AGCTGCTGCCTGCCAGAGGCGTGGCACCTCACCTCACACCTGCTCCCTGCTGCTGAGCCCCACGCCAAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp GCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTaGGCAGGAAGGTGGATGCCCCAGGGCACTCTGTCC +
Preference number: 3 (lower is better)
Translates to: AAASKHRQRHVP*AGRWMPQGTLS
Trigger: GGACAGAGTGCCCTGGGGCATCCACCTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR GCA 72 bp AGGATCCGGTCGAAGGCAGAGGGCGTCCCTCCCCGCTaGACGTGGCCCAGCACAGTTACACGGGTGTCGAAG +
Preference number: 3 (lower is better)
Translates to: RIRSKAEGVPPR*TWPSTVTRVSK
Trigger: CTTCGACACCCGTGTAACTGTGCTGGGCCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp AAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGGTaGATGCCCCAGGGCACTCTGTCCTCCTGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: KHRQRHVPWAGR*MPQGTLSSCWR
Trigger: CCTCCAGCAGGAGGACAGAGTGCCCTGGGGCATCCACCTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR-3UTR CAA 90 bp GGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGGCCAGGGATAGAGGCAGCCTCCATGCCCATCTaGCTGCTCAGGATCCGGTCG +
Preference number: 3 (lower is better)
Translates to: GLKTPARGRPGRWPGIEAASMPI*LLRIRS
Trigger: CGACCGGATCCTGAGCAGCAAGATGGGCATGGAGGC...TGCCTCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR TCA 72 bp ACCCACGGCTCCGAGTCTCACCCAGCCTCTCACACATaGAGTTCTCCCAGCCGTCCTCGGGTGGAGCCTCGG +
Preference number: 3 (lower is better)
Translates to: THGSESHPASHT*SSPSRPRVEPR
Trigger: CCGAGGCTCCACCCGAGGACGGCTGGGAGAACTTCATGTGTGAGAGGCTGGGTGAGACTCGGAGCCGTGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 72 bp CAGGCGTGGCTTCCAGCAGCGCCATCACCGCCTCCATaGCCATCTTGCTGCTCAGGATCCGGTCGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: QAWLPAAPSPPP*PSCCSGSGRRQ
Trigger: CTGCCTTCGACCGGATCCTGAGCAGCAAGATGGGCATGGAGGCGGTGATGGCGCTGCTGGAAGCCACGCCTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp TCGAAGCCATCGTGCACCACGTATACTGTGTGTCCATaGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCC +
Preference number: 3 (lower is better)
Translates to: SKPSCTTYTVCP*EMPVRTAERTA
Trigger: GGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACACACAGTATACGTGGTGCACGATGGCTTCGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CAA 90 bp TGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCCCATCACTTCCAGCACGAAGCCTCGGCAGCTCCCTaGAACATGGAGACCCCCACG +
Preference number: 3 (lower is better)
Translates to: CRYQRQVPAVPAHHFQHEASAAP*NMETPT
Trigger: CGTGGGGGTCTCCATGTTCAAGGGAGCTGCCGAGGC...TTCGTGCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGCGCTGGTATCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CAA 90 bp TGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCCCATCACTTCCAGCACGAAGTCCCAGCGGGGGCCTaGGCAAAGCCAGTTTCCTGC +
Preference number: 3 (lower is better)
Translates to: CRYQRQVPAVPAHHFQHEVPAGA*AKPVSC
Trigger: GCAGGAAACTGGCTTTGCCAAGGCCCCCGCTGGGAC...TTCGTGCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGCGCTGGTATCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 72 bp CATCGTGCACCACGTATACTGTGTGTCCATGGGAGATaGCGGTCCGCACCGCCGAGCGCACGGCCGCATTCA +
Preference number: 3 (lower is better)
Translates to: HRAPRILCVHGR*RSAPPSARPHS
Trigger: TGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACACACAGTATACGTGGTGCACGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR TCA 72 bp TTCCTGTCCCCTTGCCCTCGGCTCCCAGGACTGCAGTaGAAGAAACAGTCTGTCCCAGCGGGGGCCTTGGCA +
Preference number: 3 (lower is better)
Translates to: FLSPCPRLPGLQ*KKQSVPAGALA
Trigger: TGCCAAGGCCCCCGCTGGGACAGACTGTTTCTTTCACTGCAGTCCTGGGAGCCGAGGGCAAGGGGACAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 72 bp CGCCACCCTGCTGCAGGTGGCCCAGGACATTGGTCCTaGAGTCGAAGACGCCCTTGCCCTCTGATGAGTACA +
Preference number: 3 (lower is better)
Translates to: RHPAAGGPGHWS*SRRRPCPLMST
Trigger: TGTACTCATCAGAGGGCAAGGGCGTCTTCGACTGCAGGACCAATGTCCTGGGCCACCTGCAGCAGGGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp CCCTGGTTACACATGCTTCTCATCCGCTCTCCAGCTTaGCGTGGGGCTCAGCAGCAGGGAGCAGGTGTGAGG +
Preference number: 3 (lower is better)
Translates to: PWLHMLLIRSPA*RGAQQQGAGVR
Trigger: CCTCACACCTGCTCCCTGCTGCTGAGCCCCACGCCAAGCTGGAGAGCGGATGAGAAGCATGTGTAACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp CGCCTTCTTCTTCAGGCCGATCACGCAGGCCGAGTCTaGGGCATTGGCGAACACCCGTCCCTTGCGGTAAAC +
Preference number: 3 (lower is better)
Translates to: RLLLQADHAGRV*GIGEHPSLAVN
Trigger: GTTTACCGCAAGGGACGGGTGTTCGCCAATGCCCCAGACTCGGCCTGCGTGATCGGCCTGAAGAAGAAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp AGCCCAGCCTCTGAACCACCAGGTCCTTCACGTAGCTaGACGAGATGGGCTTCCCGTTGCGGTCAATGGCAC +
Preference number: 3 (lower is better)
Translates to: SPASEPPGPSRS*TRWASRCGQWH
Trigger: GTGCCATTGACCGCAACGGGAAGCCCATCTCGTCCAGCTACGTGAAGGACCTGGTGGTTCAGAGGCTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CAA 90 bp TGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCCCATCACTTCCAGCACGAAGAGACGCTCAGCCAGTaGGCCTGCTTGATGTTCTCA +
Preference number: 3 (lower is better)
Translates to: CRYQRQVPAVPAHHFQHEETLSQ*ACLMFS
Trigger: TGAGAACATCAAGCAGGCCAACTGGCTGAGCGTCTC...TTCGTGCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGCGCTGGTATCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 72 bp CACGAGAGGACTCTCGACCTCTACCCTGGTTACACATaGTTCTCATCCGCTCTCCAGCTTGGCGTGGGGCTC +
Preference number: 3 (lower is better)
Translates to: HERTLDLYPGYT*FSSALQLGVGL
Trigger: GAGCCCCACGCCAAGCTGGAGAGCGGATGAGAAGCATGTGTAACCAGGGTAGAGGTCGAGAGTCCTCTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 72 bp AGCATCTTCAGCATGAGCCGCAGGCTCAGCCACCACTaGTCCCGTGGCATGCGGTGCTCGAAATCAGTGTCT +
Preference number: 3 (lower is better)
Translates to: SIFSMSRRLSHH*SRGMRCSKSVS
Trigger: AGACACTGATTTCGAGCACCGCATGCCACGGGAGCAGTGGTGGCTGAGCCTGCGGCTCATGCTGAAGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp TGCAGTGAAAGAAACAGTCTGTCCCAGCGGGGGCCTTaGCAAAGCCAGTTTCCTGCTGGGGGCTCCTGCTCA +
Preference number: 3 (lower is better)
Translates to: CSERNSLSQRGP*QSQFPAGGSCS
Trigger: TGAGCAGGAGCCCCCAGCAGGAAACTGGCTTTGCCAAGGCCCCCGCTGGGACAGACTGTTTCTTTCACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp TCTGAACCACCAGGTCCTTCACGTAGCTGGACGAGATaGGCTTCCCGTTGCGGTCAATGGCACCCTCAGCGA +
Preference number: 3 (lower is better)
Translates to: SEPPGPSRSWTR*ASRCGQWHPQR
Trigger: TCGCTGAGGGTGCCATTGACCGCAACGGGAAGCCCATCTCGTCCAGCTACGTGAAGGACCTGGTGGTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp GGTAAACCTCGCGCAGCTTCTCCGACAACCACAGCATaGCCTTCACCCCCAGCTTGGTCCCATAGTTCCGGT +
Preference number: 3 (lower is better)
Translates to: GKPRAASPTTTA*PSPPAWSHSSG
Trigger: ACCGGAACTATGGGACCAAGCTGGGGGTGAAGGCCATGCTGTGGTTGTCGGAGAAGCTGCGCGAGGTTTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp CAGCATGAGCCGCAGGCTCAGCCACCACTGCTCCCGTaGCATGCGGTGCTCGAAATCAGTGTCTTTCTTGAG +
Preference number: 3 (lower is better)
Translates to: QHEPQAQPPLLP*HAVLEISVFLE
Trigger: CTCAAGAAAGACACTGATTTCGAGCACCGCATGCCACGGGAGCAGTGGTGGCTGAGCCTGCGGCTCATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CAA 90 bp GTAGCTGGACGAGATGGGCTTCCCGTTGCGGTCAATGGCACCCTCAGCGATGATAGCCAGTTGGCCTGCTaGATGTTCTCACCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: VAGRDGLPVAVNGTLSDDSQLAC*MFSPPS
Trigger: GGAGGGAGGTGAGAACATCAAGCAGGCCAACTGGCT...ATCATCGCTGAGGGTGCCATTGACCGCAACGGGAAGCCCATCTCGTCCAGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR-3UTR CAA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTAAATCAGTGTCTTTCTaGAGCTCAGTGACGGGGCTG +
Preference number: 3 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDAKSVSF*SSVTGL
Trigger: CAGCCCCGTCACTGAGCTCAAGAAAGACACTGATTT...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 72 bp AGCTGGATGATGTTGGAGACGCTCAGCCAGTTGGCCTaGTTGATGTTCTCACCTCCCTCCACGAGGCCCTCA +
Preference number: 3 (lower is better)
Translates to: SWMMLETLSQLA*LMFSPPSTRPS
Trigger: TGAGGGCCTCGTGGAGGGAGGTGAGAACATCAAGCAGGCCAACTGGCTGAGCGTCTCCAACATCATCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR GCA 72 bp ACCCACCGACCACCAGCAGGGCGTGAATACCATAGATaGGGATGTTCTCCACAATGGACTCCAGCTGGCCCT +
Preference number: 3 (lower is better)
Translates to: THRPPAGREYHR*GCSPQWTPAGP
Trigger: AGGGCCAGCTGGAGTCCATTGTGGAGAACATCCGCATCTATGGTATTCACGCCCTGCTGGTGGTCGGTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp TGGAGACCCCCACGAGAGGACTCTCGACCTCTACCCTaGTTACACATGCTTCTCATCCGCTCTCCAGCTTGG +
Preference number: 3 (lower is better)
Translates to: WRPPREDSRPLP*LHMLLIRSPAW
Trigger: CCAAGCTGGAGAGCGGATGAGAAGCATGTGTAACCAGGGTAGAGGTCGAGAGTCCTCTCGTGGGGGTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CCA 72 bp TCCAGTTGTTCTCGAAGCTCCCACCACGGAGCTGGGTaGCCTCGTCAAACCTCTTGTCATCCATGGCTTTCT +
Preference number: 3 (lower is better)
Translates to: SSCSRSSHHGAG*PRQTSCHPWLS
Trigger: AGAAAGCCATGGATGACAAGAGGTTTGACGAGGCCACCCAGCTCCGTGGTGGGAGCTTCGAGAACAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp CTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAAGCCCAGGCCCCATCTaGGCCCTGGCGCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LRAHGAPKPGGSSLQTPTSPGPI*ALALRW
Trigger: CCAGCGCAGCGCCAGGGCTCAGATGGGGCCTGGGCT...TGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GTCCTCCTGCTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCACGGCCGCATTCATaGCAGCCGCCGGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VLLLEGLAGWSQDTSPREARPHS*QPPGPP
Trigger: TGGGGGCCCCGGCGGCTGGCATGAATGCGGCCGTGC...CTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GTCCTCCTGCTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGGTCCACCGCGGCCATaGCGGCGGCCGAAACACGGG +
Preference number: 4 (lower is better)
Translates to: VLLLEGLAGWSQDTSPREGPPRP*RRPKHG
Trigger: CCCGTGTTTCGGCCGCCGCCATGGCCGCGGTGGACC...CTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCTGGTCAGGACGCCGATaGCCTTGCCCGCGCCCGACG +
Preference number: 4 (lower is better)
Translates to: EGPWGAKARGQQPPNTDSWSGRR*PCPRPT
Trigger: CGTCGGGCGCGGGCAAGGCCATCGGCGTCCTGACCA...GCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGACGCTGAGGGCCCATaGGGCGCCAAAGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GGPGRLVSRHQPEGGLAGDAEGP*GAKARG
Trigger: CCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC...ACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
3UTR CAA 72 bp GGGGAGGGGCGTGGGCATGGCTGGCCTCAGAAGCCCTaGTCCATGCTCAGGGTGCGGCGGGTCACGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GEGRGHGWPQKP*SMLRVRRVTCS
Trigger: GGAGCACGTGACCCGCCGCACCCTGAGCATGGACAAGGGCTTCTGAGGCCAGCCATGCCCACGCCCCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp GACGCTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGTGGAGCCTCGGGGATaGACAGCCAGTCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: DAEGPWGAKARGQQPPNTVEPRG*TASRPL
Trigger: CAGGGGCCGACTGGCTGTTCATCCCCGAGGCTCCAC...GGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGAGGGGCAGCCGCACTaGCTGGTTCCCCGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHEGQPH*LVPREG
Trigger: ACCCTCTCGGGGAACCAGTCAGTGCGGCTGCCCCTC...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGGCAGCGTTCATGCCTTaGGCGTCGCCGCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKAAFMP*ASPPLV
Trigger: GACCAGCGGCGGCGACGCGCAAGGCATGAACGCTGC...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349048.9
CDS-3UTR GCA 90 bp CGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGGCGTCCCTCCCCGCTaGACGTGGCCCAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: RQSQGAAASKHRQRHVPWGVPPR*TWPSTV
Trigger: AACTGTGCTGGGCCACGTGCAGCGGGGAGGGACGCC...CCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGGCGTCCCTCCCCGCTaGACGTGGCCCAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: EGPWGAKARGQQPPNTDSGVPPR*TWPSTV
Trigger: AACTGTGCTGGGCCACGTGCAGCGGGGAGGGACGCC...GCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGCCTGCTGGGGGCTCCTaGTCAAGCCTCGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKPAGGS*SSLGSS
Trigger: GGAGCTGCCGAGGCTTGAGCAGGAGCCCCCAGCAGG...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp GGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGGCCAGGGATAGAGGCAGGTCCACCGCGGCCATaGCGGCGGCCGAAACACGGG +
Preference number: 4 (lower is better)
Translates to: GLKTPARGRPGRWPGIEAGPPRP*RRPKHG
Trigger: CCCGTGTTTCGGCCGCCGCCATGGCCGCGGTGGACC...TGCCTCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCAGGCTGGGGAGGGGCGTaGGCATGGCTGGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPGWGGA*AWLASE
Trigger: TTCTGAGGCCAGCCATGCCCACGCCCCTCCCCAGCC...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp TGCTGCTCAGGATCCGGTCGAAGGCAGAGGGCGTCCCTCCCCGCTGCACGTGGCGCTCCTCCAGCAGGCTaGCCCACTCGCTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: CCSGSGRRQRASLPAARGAPPAG*PTRCGR
Trigger: TCTTCCGCAGCGAGTGGGGCAGCCTGCTGGAGGAGC...GCCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCTGAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGTGTGTCCATGGGAGATaGCGGTCCGCACCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKCVHGR*RSAPPS
Trigger: GCTCGGCGGTGCGGACCGGCATCTCCCATGGACACA...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACTGTGTCCATGGGAGATaGCGGTCCGCACCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHCVHGR*RSAPPS
Trigger: GCTCGGCGGTGCGGACCGGCATCTCCCATGGACACA...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGCGGCCCCCACAGCAATaGCAGTCACGGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKRPPQQ*QSRWPG
Trigger: ACCTGGCCACCGTGACTGGCATTGCTGTGGGGGCCG...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACCGGCCCCCACAGCAATaGCAGTCACGGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHRPPQQ*QSRWPG
Trigger: ACCTGGCCACCGTGACTGGCATTGCTGTGGGGGCCG...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGGAGCGCCACCCTGCTaGAGGTGGCCCAGGACATTG +
Preference number: 4 (lower is better)
Translates to: LEGLAGWSQDTSPREAWQGAPPC*RWPRTL
Trigger: CAATGTCCTGGGCCACCTGCAGCAGGGTGGCGCTCC...CTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCAGTTGGAGCGCCACCCTaGTGCAGGTGGCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPVGAPP*CRWPRT
Trigger: TGTCCTGGGCCACCTGCAGCAGGGTGGCGCTCCAAC...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGAGGCTCAGCCACCACTaGTCCCGTGGCATGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LEGLAGWSQDTSPREAWQRLSHH*SRGMRC
Trigger: GCACCGCATGCCACGGGAGCAGTGGTGGCTGAGCCT...CTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp ATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCAGCCGCTGTCCATGCTCAGGGTaGGGCGGGTCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: MGDAGPHRRAHGRIHASRCPCSG*GGSRAP
Trigger: TGGAGCACGTGACCCGCCGCACCCTGAGCATGGACA...GCGGCTGGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp ATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCAGCCGCGGGCAGGAAGGTGGATaGCCCAGGGCACTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: MGDAGPHRRAHGRIHASRGQEGG*PRALCP
Trigger: AGGACAGAGTGCCCTGGGGCATCCACCTTCCTGCCC...GCGGCTGGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp CAGTCGGCCCCTGAGGCCAGTGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCAGGCGGAGTCAATGTaGCACTGGGCGGGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QSAPEASADTSARYPQCRQAESM*HWAGQP
Trigger: GGGCTGACCCGCCCAGTGGCACATTGACTCCGCCTG...CCGGCACTGCGGGTACCTGGCGCTGGTATCTGCACTGGCCTCAGGGGCCGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp GGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGGCCAGGGATAGAGGCATGGTCAGGACGCCGATaGCCTTGCCCGCGCCCGACG +
Preference number: 4 (lower is better)
Translates to: GLKTPARGRPGRWPGIEAWSGRR*PCPRPT
Trigger: CGTCGGGCGCGGGCAAGGCCATCGGCGTCCTGACCA...TGCCTCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GACGCTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCCCTCCCCGCTGCACGTaGCCCAGCACAGTTACACGG +
Preference number: 4 (lower is better)
Translates to: DAEGPWGAKARGQQPPNTPPRCT*PSTVTR
Trigger: CCGTGTAACTGTGCTGGGCCACGTGCAGCGGGGAGG...GGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGCCTCCCCGCTGCACGTaGCCCAGCACAGTTACACGG +
Preference number: 4 (lower is better)
Translates to: LEGLAGWSQDTSPREAWQPPRCT*PSTVTR
Trigger: CCGTGTAACTGTGCTGGGCCACGTGCAGCGGGGAGG...CTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GACGCTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCCCGGCGTGTCAGGCGTaGCTTCCAGCAGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: DAEGPWGAKARGQQPPNTPACQA*LPAAPS
Trigger: TGATGGCGCTGCTGGAAGCCACGCCTGACACGCCGG...GGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCAGGCAGCCGCACTGACTaGTTCCCCGAGAGGGTGACC +
Preference number: 4 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPGSRTD*FPERVT
Trigger: GGTCACCCTCTCGGGGAACCAGTCAGTGCGGCTGCC...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCCCGGTCAAAGGGGGTTaGAGCGCCACCCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGPVKGG*SATLLQ
Trigger: CTGCAGCAGGGTGGCGCTCCAACCCCCTTTGACCGG...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACCACGCAGGCCGAGTCTaGGGCATTGGCGAACACCCG +
Preference number: 4 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHHAGRV*GIGEHP
Trigger: CGGGTGTTCGCCAATGCCCCAGACTCGGCCTGCGTG...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGGGCGTGGGCATGGCTaGCCTCAGAAGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EGPWGAKARGQQPPNTDSGRGHG*PQKPLS
Trigger: GGACAAGGGCTTCTGAGGCCAGCCATGCCCACGCCC...GCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGGAGGGGCGTGGGCATaGCTGGCCTCAGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: RQSQGAAASKHRQRHVPWGGAWA*LASEAL
Trigger: AAGGGCTTCTGAGGCCAGCCATGCCCACGCCCCTCC...CCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCAGCCCGAGGGAGGCCTaGCAGGTGGCCAGGGATAGA +
Preference number: 4 (lower is better)
Translates to: EGPWGAKARGQQPPNTDSSPREA*QVARDR
Trigger: TCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCT...GCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGAGGGCCTGGCAGGCTaGTCTCAAGACACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHEGLAG*SQDTSP
Trigger: CGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTC...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCCCCTGGGCAGGAAGGTaGATGCCCCAGGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGPWAGR*MPQGTL
Trigger: CAGAGTGCCCTGGGGCATCCACCTTCCTGCCCAGGG...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACACAGCGCCACGTCCCCTaGGCAGGAAGGTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: LRAHGAPKPGGSSLQTPTQRHVP*AGRWMP
Trigger: GGGCATCCACCTTCCTGCCCAGGGGACGTGGCGCTG...TGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp CTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGAGATGTTGGCACCTGTaGGGCTGCCATCCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: LEGLAGWSQDTSPREAWQRCWHL*GCHPRR
Trigger: TCGGCGGGGATGGCAGCCTCACAGGTGCCAACATCT...CTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACCAGCATCTTCAGCATaGGCCGCAGGCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPPASSA*AAGSAT
Trigger: GGTGGCTGAGCCTGCGGCTCATGCTGAAGATGCTGG...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp CAGTCGGCCCCTGAGGCCAGTGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCCAGCATCTTCAGCATaGGCCGCAGGCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: QSAPEASADTSARYPQCRPASSA*AAGSAT
Trigger: GGTGGCTGAGCCTGCGGCTCATGCTGAAGATGCTGG...CCGGCACTGCGGGTACCTGGCGCTGGTATCTGCACTGGCCTCAGGGGCCGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp TGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCCCATCACTTCCAGCACGAAAGCCCAGGCCCCATCTaGGCCCTGGCGCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CRYQRQVPAVPAHHFQHESPGPI*ALALRW
Trigger: CCAGCGCAGCGCCAGGGCTCAGATGGGGCCTGGGCT...TTCGTGCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGCGCTGGTATCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGCTCCTCCAGCAGGCTaGCCCACTCGCTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQAPPAG*PTRCGR
Trigger: TCTTCCGCAGCGAGTGGGGCAGCCTGCTGGAGGAGC...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGCCAGGTACCCGCAGTaGCGGCCCATCACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQARYPQ*RPITSS
Trigger: GCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGC...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGCAGCCGGCCACGTCGTaGCAGCCTACTTCTTGCACC +
Preference number: 4 (lower is better)
Translates to: LEGLAGWSQDTSPREAWQQPATS*QPTSCT
Trigger: GGTGCAAGAAGTAGGCTGGCACGACGTGGCCGGCTG...CTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGTGTCCATGCTCAGGGTaGGGCGGGTCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKCPCSG*GGSRAP
Trigger: TGGAGCACGTGACCCGCCGCACCCTGAGCATGGACA...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGGGGCAGGAAGGTGGATaGCCCAGGGCACTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKGQEGG*PRALCP
Trigger: AGGACAGAGTGCCCTGGGGCATCCACCTTCCTGCCC...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp TGCTGCTCAGGATCCGGTCGAAGGCAGAGGGCGTCCCTCCCCGCTGCACGTGGCAGGTGTGAGGTGAGGTaGCACGCCTCTGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CCSGSGRRQRASLPAARGRCEVR*HASGRQ
Trigger: CTGCCTGCCAGAGGCGTGGCACCTCACCTCACACCT...GCCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCTGAGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp CTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACACCAGCCGTCCTCGGGTaGAGCCTCGGGGATGAACAG +
Preference number: 4 (lower is better)
Translates to: LRAHGAPKPGGSSLQTPTPAVLG*SLGDEQ
Trigger: CTGTTCATCCCCGAGGCTCCACCCGAGGACGGCTGG...TGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGCCAGCCGTCCTCGGGTaGAGCCTCGGGGATGAACAG +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQPAVLG*SLGDEQ
Trigger: CTGTTCATCCCCGAGGCTCCACCCGAGGACGGCTGG...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCCTCCCACCACGGAGCTaGGTGGCCTCGTCAAACCTC +
Preference number: 4 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGLPPRS*VASSNL
Trigger: GAGGTTTGACGAGGCCACCCAGCTCCGTGGTGGGAG...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CAGTCGGCCCCTGAGGCCAGTGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCTCCCACCACGGAGCTaGGTGGCCTCGTCAAACCTC +
Preference number: 4 (lower is better)
Translates to: QSAPEASADTSARYPQCRLPPRS*VASSNL
Trigger: GAGGTTTGACGAGGCCACCCAGCTCCGTGGTGGGAG...CCGGCACTGCGGGTACCTGGCGCTGGTATCTGCACTGGCCTCAGGGGCCGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp GAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCTCTTGGTCCCCAGCATaGAGCCACCACGCCCCAACC +
Preference number: 4 (lower is better)
Translates to: EGPWGAKARGQQPPNTDSSWSPA*SHHAPT
Trigger: GGTTGGGGCGTGGTGGCTCCATGCTGGGGACCAAGA...GCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GACGCTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCACTCCAGCTGGCCCTTaGGCAGGGTCCTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: DAEGPWGAKARGQQPPNTTPAGP*AGSSWS
Trigger: GGACCAAGAGGACCCTGCCCAAGGGCCAGCTGGAGT...GGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGCCGGTCAAAGGGGGTTaGAGCGCCACCCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQPVKGG*SATLLQ
Trigger: CTGCAGCAGGGTGGCGCTCCAACCCCCTTTGACCGG...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GTGTCCATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCCCGAGTCTGGGGCATTaGCGAACACCCGTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VSMGDAGPHRRAHGRIHAPSLGH*RTPVPC
Trigger: GCAAGGGACGGGTGTTCGCCAATGCCCCAGACTCGG...GGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGATAGAGGCAGGGGATaGGCTGAGCAGGGACGCAGC +
Preference number: 4 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHDRGRG*AEQGRS
Trigger: GCTGCGTCCCTGCTCAGCCCATCCCCTGCCTCTATC...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GTCCTCCTGCTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGCCCTGGGCAGGAAGGTaGATGCCCCAGGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: VLLLEGLAGWSQDTSPREPWAGR*MPQGTL
Trigger: CAGAGTGCCCTGGGGCATCCACCTTCCTGCCCAGGG...CTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGGAGTCAATGTGCCACTaGGCGGGTCAGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKESMCH*AGQPRV
Trigger: GACCCTGGGCTGACCCGCCCAGTGGCACATTGACTC...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGTGCCGCCCAGCTGGATaGTGTTGGAGACGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQCRPAG*CWRRSA
Trigger: GGCTGAGCGTCTCCAACATCATCCAGCTGGGCGGCA...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp GGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTTCGAAGCCCAGCCTCTaGACCACCAGGTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: GGPGRLVSRHQPEGGLAGSKPSL*TTRSFT
Trigger: CGTGAAGGACCTGGTGGTTCAGAGGCTGGGCTTCGA...ACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp GAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCCCATGGTCTCCACGATaGACACACGGCGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: EGPWGAKARGQQPPNTDSPWSPR*THGAWS
Trigger: GGACCAAGCGCCGTGTGTTCATCGTGGAGACCATGG...GCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp CGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGCCATGGTCTCCACGATaGACACACGGCGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: RQSQGAAASKHRQRHVPWPWSPR*THGAWS
Trigger: GGACCAAGCGCCGTGTGTTCATCGTGGAGACCATGG...CCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp CTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGTAGAGCAAGGGCTGAGGCAGGGGATGGGCTaGGCAGGGACGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LSTQPRRQQPTGQVEQGLRQGMG*AGTQPP
Trigger: TGGGGGCTGCGTCCCTGCTCAGCCCATCCCCTGCCT...CAGCCCTTGCTCTACCTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGCAGCCGGCCACGTCGTaGCAGCCTACTTCTTGCACC +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQQPATS*QPTSCT
Trigger: GGTGCAAGAAGTAGGCTGGCACGACGTGGCCGGCTG...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGCGAACACCCGTCCCTTaGGGTAAACCTCGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LEGLAGWSQDTSPREAWQRTPVP*GKPRAA
Trigger: AGCTGCGCGAGGTTTACCGCAAGGGACGGGTGTTCG...CTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp TGCTGCTCAGGATCCGGTCGAAGGCAGAGGGCGTCCCTCCCCGCTGCACGTGGCCGAACACCCGTCCCTTaGGGTAAACCTCGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: CCSGSGRRQRASLPAARGRTPVP*GKPRAA
Trigger: AGCTGCGCGAGGTTTACCGCAAGGGACGGGTGTTCG...GCCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCTGAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTGTGCGGCGGGTCACGTaGTCCAGCTCCCCTGACACG +
Preference number: 4 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDAVRRVT*SSSPDT
Trigger: CGTGTCAGGGGAGCTGGAGCACGTGACCCGCCGCAC...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGGCCAGGGATAGAGGCAGACGCAGCCCCCACCTaGCTGCAGGCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: GLKTPARGRPGRWPGIEADAAPT*LQAPDT
Trigger: TGTGTCTGGAGCCTGCAGGCAGGTGGGGGCTGCGTC...TGCCTCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGTCCTCTGGTGGCTCTaGGCAGTGGTGGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: RQSQGAAASKHRQRHVPWVLWWL*AVVVMA
Trigger: TGCCATCACCACCACTGCCCAGAGCCACCAGAGGAC...CCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACACGAAGGTCCTCTGGTaGCTCTGGGCAGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHTKVLW*LWAVVV
Trigger: CACCACCACTGCCCAGAGCCACCAGAGGACCTTCGT...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTAGCACGAAGGTCCTCTaGTGGCTCTGGGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: GGPGRLVSRHQPEGGLAGSTKVL*WLWAVV
Trigger: CACCACTGCCCAGAGCCACCAGAGGACCTTCGTGCT...ACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGGCCAGGGATAGAGGCACCGGCGTGTCAGGCGTaGCTTCCAGCAGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: GLKTPARGRPGRWPGIEAPACQA*LPAAPS
Trigger: TGATGGCGCTGCTGGAAGCCACGCCTGACACGCCGG...TGCCTCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGTGGGCAGGGTCCTCTTaGTCCCCAGCATGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQWAGSS*SPAWSH
Trigger: GTGGCTCCATGCTGGGGACCAAGAGGACCCTGCCCA...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GACGCTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCACAATGGACTCCAGCTaGCCCTTGGGCAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: DAEGPWGAKARGQQPPNTTMDSS*PLGRVL
Trigger: GAGGACCCTGCCCAAGGGCCAGCTGGAGTCCATTGT...GGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GACGCTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGGTGGCCCAGGACATTaGTCCTGCAGTCGAAGACGC +
Preference number: 4 (lower is better)
Translates to: DAEGPWGAKARGQQPPNTGGPGH*SCSRRR
Trigger: GCGTCTTCGACTGCAGGACCAATGTCCTGGGCCACC...GGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CAGTCGGCCCCTGAGGCCAGTGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGGGTGGCCCAGGACATTaGTCCTGCAGTCGAAGACGC +
Preference number: 4 (lower is better)
Translates to: QSAPEASADTSARYPQCRGGPGH*SCSRRR
Trigger: GCGTCTTCGACTGCAGGACCAATGTCCTGGGCCACC...CCGGCACTGCGGGTACCTGGCGCTGGTATCTGCACTGGCCTCAGGGGCCGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp GACGCTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCCCGACAACCACAGCATaGCCTTCACCCCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: DAEGPWGAKARGQQPPNTPTTTA*PSPPAW
Trigger: CCAAGCTGGGGGTGAAGGCCATGCTGTGGTTGTCGG...GGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GAAGTTCTCCCAGCCGTCCTCGGGTGGAGCCTCGGGGATGAACAGCCAGTCGGCGGAGGGGCGTGGGCATaGCTGGCCTCAGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: EVLPAVLGWSLGDEQPVGGGAWA*LASEAL
Trigger: AAGGGCTTCTGAGGCCAGCCATGCCCACGCCCCTCC...GCCGACTGGCTGTTCATCCCCGAGGCTCCACCCGAGGACGGCTGGGAGAACTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTGGCTGGGGAGGGGCGTaGGCATGGCTGGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDAGWGGA*AWLASE
Trigger: TTCTGAGGCCAGCCATGCCCACGCCCCTCCCCAGCC...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGTCCTGCTGGAGGGCCTaGCAGGCTGGTCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: LEGLAGWSQDTSPREAWQSCWRA*QAGLKT
Trigger: TGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGA...CTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGTAGAGCAAGGGCTGGACGCTGAGGGCCCATaGGGCGCCAAAGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSTQPRRQQPTGQVEQGLDAEGP*GAKARG
Trigger: CCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC...CAGCCCTTGCTCTACCTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGACAGGTGCTGCACGTaGGCAGGAGCAGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: GGPGRLVSRHQPEGGLAGDRCCT*AGAGHS
Trigger: ACTGTGACCTGCTCCTGCCCACGTGCAGCACCTGTC...ACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCGCCAGTTGGCCTGCTTaGTGTTCTCACCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGASWPA*CSHLPP
Trigger: TGGAGGGAGGTGAGAACATCAAGCAGGCCAACTGGC...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp GAAGTTCTCCCAGCCGTCCTCGGGTGGAGCCTCGGGGATGAACAGCCAGTCGGCAGATGTTGGCACCTGTaGGGCTGCCATCCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: EVLPAVLGWSLGDEQPVGRCWHL*GCHPRR
Trigger: TCGGCGGGGATGGCAGCCTCACAGGTGCCAACATCT...GCCGACTGGCTGTTCATCCCCGAGGCTCCACCCGAGGACGGCTGGGAGAACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp CGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGCCGGGCTGTAGTCTCTaGGATCTTACCTTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: RQSQGAAASKHRQRHVPWPGCSL*DLTFRH
Trigger: GTGGCGGAAGGTAAGATCTCAGAGACTACAGCCCGG...CCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGCCAGCCTCTCACACATaGAGTTCTCCCAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKPASHT*SSPSRP
Trigger: AGGACGGCTGGGAGAACTTCATGTGTGAGAGGCTGG...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp GGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTCCTACTTCTTGCACCTaGCCCTTGGCTAGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: GGPGRLVSRHQPEGGLAGPTSCT*PLARPS
Trigger: CGAAGGCCTAGCCAAGGGTCAGGTGCAAGAAGTAGG...ACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp GGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTCCGAGGCAGACTGTTTaGTGCGGTCACAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GGPGRLVSRHQPEGGLAGPRQTV*CGHSSP
Trigger: TGGAGAGCTGTGACCGCATCAAACAGTCTGCCTCGG...ACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCCGTAGGCGGCCATACTaGTGCGGTATTGTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGRRRPY*CGIVPA
Trigger: TGCTGGCACAATACCGCATCAGTATGGCCGCCTACG...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGTAGAGCAAGGGCTGGGACAGCAGCGTTCATaGCTTGCGCGTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LSTQPRRQQPTGQVEQGLGQQRS*LARRRR
Trigger: GCGGCGGCGACGCGCAAGGCATGAACGCTGCTGTCC...CAGCCCTTGCTCTACCTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349048.9
CDS-3UTR GCA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCCCACATAAATGCCCATaGGCGTCACAGCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGPHKCP*ASQPGQ
Trigger: CTGTCCGGGCTGTGACGCGCATGGGCATTTATGTGG...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp AGCCACCACGCCCCAACCAGCCGGCCACGTCGTGCCAGCCTACTTCTTGCACCTGGCTGCCCCACTCGCTaGGGAAGATGTTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: SHHAPTSRPRRASLLLAPGCPTR*GRCWHL
Trigger: CAGGTGCCAACATCTTCCGCAGCGAGTGGGGCAGCC...AGGTGCAAGAAGTAGGCTGGCACGACGTGGCCGGCTGGTTGGGGCGTGGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTGCCAGGTACCCGCAGTaGCGGCCCATCACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDAARYPQ*RPITSS
Trigger: GCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGC...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCAGATGGGCTTCCCGTTaGGGTCAATGGCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: EGPWGAKARGQQPPNTDSRWASR*GQWHPQ
Trigger: CTGAGGGTGCCATTGACCGCAACGGGAAGCCCATCT...GCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACCCATCACCGCCTCCATaGCCATCTTGCTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHPSPPP*PSCCSG
Trigger: TCCTGAGCAGCAAGATGGGCATGGAGGCGGTGATGG...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GTGTCCATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCCCATCACCGCCTCCATaGCCATCTTGCTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VSMGDAGPHRRAHGRIHAPSPPP*PSCCSG
Trigger: TCCTGAGCAGCAAGATGGGCATGGAGGCGGTGATGG...GGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACCAGGACATTGGTCCTaGAGTCGAAGACGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPPGHWS*SRRRPC
Trigger: GCAAGGGCGTCTTCGACTGCAGGACCAATGTCCTGG...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGCCAGGACATTGGTCCTaGAGTCGAAGACGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: RQSQGAAASKHRQRHVPWPGHWS*SRRRPC
Trigger: GCAAGGGCGTCTTCGACTGCAGGACCAATGTCCTGG...CCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp TACCGGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGAGTGCGGCGGGTCACGTaGTCCAGCTCCCCTGACACG +
Preference number: 4 (lower is better)
Translates to: YRPGRARAGPCSEPSMGRVRRVT*SSSPDT
Trigger: CGTGTCAGGGGAGCTGGAGCACGTGACCCGCCGCAC...TCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCCGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTGACGCAGCCCCCACCTaGCTGCAGGCTCCAGACACA +
Preference number: 4 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDADAAPT*LQAPDT
Trigger: TGTGTCTGGAGCCTGCAGGCAGGTGGGGGCTGCGTC...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GTCCTCCTGCTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGTCCTCTGGTGGCTCTaGGCAGTGGTGGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: VLLLEGLAGWSQDTSPREVLWWL*AVVVMA
Trigger: TGCCATCACCACCACTGCCCAGAGCCACCAGAGGAC...CTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGGTCCTTCACGTAGCTaGACGAGATGGGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHGPSRS*TRWASR
Trigger: ACGGGAAGCCCATCTCGTCCAGCTACGTGAAGGACC...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp AGCCACCACGCCCCAACCAGCCGGCCACGTCGTGCCAGCCTACTTCTTGCACCTACTCCAGCTGGCCCTTaGGCAGGGTCCTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SHHAPTSRPRRASLLLAPTPAGP*AGSSWS
Trigger: GGACCAAGAGGACCCTGCCCAAGGGCCAGCTGGAGT...AGGTGCAAGAAGTAGGCTGGCACGACGTGGCCGGCTGGTTGGGGCGTGGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp TACCGGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGAGGGAGGCCTGGCAGGTaGCCAGGGATAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YRPGRARAGPCSEPSMGRGRPGR*PGIEAG
Trigger: CCCTGCCTCTATCCCTGGCCACCTGCCAGGCCTCCC...TCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCCGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp TGGTCCCATAGTTCCGGTCAAAGGGGGTTGGAGCGCCACCCTGCTGCAGGTGGCAGCCCGAGGGAGGCCTaGCAGGTGGCCAGGGATAGA +
Preference number: 4 (lower is better)
Translates to: WSHSSGQRGLERHPAAGGSPREA*QVARDR
Trigger: TCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCT...GCCACCTGCAGCAGGGTGGCGCTCCAACCCCCTTTGACCGGAACTATGGGACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGAAGCCAGTTTCCTGCTaGGGGCTCCTGCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKKPVSC*GLLLKP
Trigger: AGGCTTGAGCAGGAGCCCCCAGCAGGAAACTGGCTT...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp TACACATGCTTCTCATCCGCTCTCCAGCTTGGCGTGGGGCTCAGCAGCAGGGAGGAGGGGCAGCCGCACTaGCTGGTTCCCCGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: YTCFSSALQLGVGLSSREEGQPH*LVPREG
Trigger: ACCCTCTCGGGGAACCAGTCAGTGCGGCTGCCCCTC...CTCCCTGCTGCTGAGCCCCACGCCAAGCTGGAGAGCGGATGAGAAGCATGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGCCACATAAATGCCCATaGGCGTCACAGCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQPHKCP*ASQPGQ
Trigger: CTGTCCGGGCTGTGACGCGCATGGGCATTTATGTGG...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GCTTCTCCGACAACCACAGCATGGCCTTCACCCCCAGCTTGGTCCCATAGTTCCCAGGTTGTAGGCCGCTaGCCGGCGCCCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ASPTTTAWPSPPAWSHSSQVVGR*PAPLPG
Trigger: ACCAGGGAGGGGCGCCGGGCAGCGGCCTACAACCTG...GGAACTATGGGACCAAGCTGGGGGTGAAGGCCATGCTGTGGTTGTCGGAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGACTTCCTTGGTCATCTaGACGCACTCCATGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKTSLVI*THSMRG
Trigger: GCCCCTCATGGAGTGCGTGCAGATGACCAAGGAAGT...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCACTTCCTTGGTCATCTaGACGCACTCCATGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGTSLVI*THSMRG
Trigger: GCCCCTCATGGAGTGCGTGCAGATGACCAAGGAAGT...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GTGCCAGGGACGTTGTTGCTGATGGTGGCTGGGATGACACACATGACGATGCAGGCACGGCCGCATTCATaGCAGCCGCCGGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VPGTLLLMVAGMTHMTMQARPHS*QPPGPP
Trigger: TGGGGGCCCCGGCGGCTGGCATGAATGCGGCCGTGC...CTGCATCGTCATGTGTGTCATCCCAGCCACCATCAGCAACAACGTCCCTGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp CTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGTAGAGCAAGGGCTGGTTGGAGCGCCACCCTaGTGCAGGTGGCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LSTQPRRQQPTGQVEQGLVGAPP*CRWPRT
Trigger: TGTCCTGGGCCACCTGCAGCAGGGTGGCGCTCCAAC...CAGCCCTTGCTCTACCTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGAGAAGTCGTTATCGATaGAGCCCACTAGGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: RQSQGAAASKHRQRHVPWRSRYR*SPLGPR
Trigger: TCGCGGGCCTAGTGGGCTCCATCGATAACGACTTCT...CCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GTCCTCCTGCTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGCGTAGCTGGACGAGATaGGCTTCCCGTTGCGGTCAA +
Preference number: 4 (lower is better)
Translates to: VLLLEGLAGWSQDTSPRERSWTR*ASRCGQ
Trigger: TTGACCGCAACGGGAAGCCCATCTCGTCCAGCTACG...CTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGCGTAGCTGGACGAGATaGGCTTCCCGTTGCGGTCAA +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQRSWTR*ASRCGQ
Trigger: TTGACCGCAACGGGAAGCCCATCTCGTCCAGCTACG...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACTTGCACCTGACCCTTaGCTAGGCCTTCGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPLAPDP*LGLRSH
Trigger: ATGGCTTCGAAGGCCTAGCCAAGGGTCAGGTGCAAG...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCGGATGTTCTCCACAATaGACTCCAGCTGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGGCSPQ*TPAGPW
Trigger: CCAAGGGCCAGCTGGAGTCCATTGTGGAGAACATCC...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCAGGATGTTCTCCACAATaGACTCCAGCTGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPGCSPQ*TPAGPW
Trigger: CCAAGGGCCAGCTGGAGTCCATTGTGGAGAACATCC...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGGCCAGGGATAGAGGCAGACAGGTGCTGCACGTaGGCAGGAGCAGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: GLKTPARGRPGRWPGIEADRCCT*AGAGHS
Trigger: ACTGTGACCTGCTCCTGCCCACGTGCAGCACCTGTC...TGCCTCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp GTGTCCATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCCATAGCCCTCGTAGATaGGGAAGACTTTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: VSMGDAGPHRRAHGRIHAHSPRR*GRLWHP
Trigger: TGGGTGCCAAAGTCTTCCTCATCTACGAGGGCTATG...GGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp AGCCACCACGCCCCAACCAGCCGGCCACGTCGTGCCAGCCTACTTCTTGCACCTCCGGGCTGTAGTCTCTaGGATCTTACCTTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SHHAPTSRPRRASLLLAPPGCSL*DLTFRH
Trigger: GTGGCGGAAGGTAAGATCTCAGAGACTACAGCCCGG...AGGTGCAAGAAGTAGGCTGGCACGACGTGGCCGGCTGGTTGGGGCGTGGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp AGCCACCACGCCCCAACCAGCCGGCCACGTCGTGCCAGCCTACTTCTTGCACCTCGTAGGCGGCCATACTaGTGCGGTATTGTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SHHAPTSRPRRASLLLAPRRRPY*CGIVPA
Trigger: TGCTGGCACAATACCGCATCAGTATGGCCGCCTACG...AGGTGCAAGAAGTAGGCTGGCACGACGTGGCCGGCTGGTTGGGGCGTGGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp GTGTCCATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCCTCCCAGGACTGCAGTaGAAGAAACAGTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: VSMGDAGPHRRAHGRIHALPGLQ*KKQSVP
Trigger: TGGGACAGACTGTTTCTTTCACTGCAGTCCTGGGAG...GGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp CTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGAGTCGAAGACGCCCTTaGCCTCTGATGAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: LEGLAGWSQDTSPREAWQSRRRP*PLMSTG
Trigger: ACCTGTACTCATCAGAGGGCAAGGGCGTCTTCGACT...CTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTAGAAGCCCTTGTCCATaGTCAGGGTGCGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDARSPCP*SGCGGS
Trigger: TGACCCGCCGCACCCTGAGCATGGACAAGGGCTTCT...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GTCCTCCTGCTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGAGAAAAGGTGACAGGTaGTGCACGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VLLLEGLAGWSQDTSPRERKGDR*CTWAGA
Trigger: TGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCT...CTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp ATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCAGCCGCTACCCTGGTTACACATaGTTCTCATCCGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: MGDAGPHRRAHGRIHASRYPGYT*FSSALQ
Trigger: CTGGAGAGCGGATGAGAAGCATGTGTAACCAGGGTA...GCGGCTGGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACCTCGGCTCCCAGGACTaGAGTGAAAGAAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHLGSQD*SERNSL
Trigger: CAGACTGTTTCTTTCACTGCAGTCCTGGGAGCCGAG...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGATAGTGCCGCCCAGCTaGATGATGTTGGAGACGCTC +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQIVPPS*MMLETL
Trigger: GAGCGTCTCCAACATCATCCAGCTGGGCGGCACTAT...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAAGAAGTCGTTATCGATaGAGCCCACTAGGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: LRAHGAPKPGGSSLQTPTRSRYR*SPLGPR
Trigger: TCGCGGGCCTAGTGGGCTCCATCGATAACGACTTCT...TGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp TGGTCCCATAGTTCCGGTCAAAGGGGGTTGGAGCGCCACCCTGCTGCAGGTGGCAGCACGAAGGTCCTCTaGTGGCTCTGGGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: WSHSSGQRGLERHPAAGGSTKVL*WLWAVV
Trigger: CACCACTGCCCAGAGCCACCAGAGGACCTTCGTGCT...GCCACCTGCAGCAGGGTGGCGCTCCAACCCCCTTTGACCGGAACTATGGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp AGCCACCACGCCCCAACCAGCCGGCCACGTCGTGCCAGCCTACTTCTTGCACCTGGTCCTTCACGTAGCTaGACGAGATGGGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SHHAPTSRPRRASLLLAPGPSRS*TRWASR
Trigger: ACGGGAAGCCCATCTCGTCCAGCTACGTGAAGGACC...AGGTGCAAGAAGTAGGCTGGCACGACGTGGCCGGCTGGTTGGGGCGTGGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp GTCCTCCTGCTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGTATACTGTGTGTCCATaGGAGATGCCGGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: VLLLEGLAGWSQDTSPREYTVCP*EMPVRT
Trigger: GGTGCGGACCGGCATCTCCCATGGACACACAGTATA...CTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GTCCTCCTGCTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGCTTGCACCTGACCCTTaGCTAGGCCTTCGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VLLLEGLAGWSQDTSPRELAPDP*LGLRSH
Trigger: ATGGCTTCGAAGGCCTAGCCAAGGGTCAGGTGCAAG...CTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTCCGACAACCACAGCATaGCCTTCACCCCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDAPTTTA*PSPPAW
Trigger: CCAAGCTGGGGGTGAAGGCCATGCTGTGGTTGTCGG...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTCCACCACTGCTCCCGTaGCATGCGGTGCTCGAAATC +
Preference number: 4 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDAPPLLP*HAVLEI
Trigger: GATTTCGAGCACCGCATGCCACGGGAGCAGTGGTGG...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGTAGAGCAAGGGCTGGATAGAGGCAGGGGATaGGCTGAGCAGGGACGCAGC +
Preference number: 4 (lower is better)
Translates to: LSTQPRRQQPTGQVEQGLDRGRG*AEQGRS
Trigger: GCTGCGTCCCTGCTCAGCCCATCCCCTGCCTCTATC...CAGCCCTTGCTCTACCTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GTAGCTGGACGAGATGGGCTTCCCGTTGCGGTCAATGGCACCCTCAGCGATGATGGGAGGCCTGGCAGGTaGCCAGGGATAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VAGRDGLPVAVNGTLSDDGRPGR*PGIEAG
Trigger: CCCTGCCTCTATCCCTGGCCACCTGCCAGGCCTCCC...ATCATCGCTGAGGGTGCCATTGACCGCAACGGGAAGCCCATCTCGTCCAGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp AGCAGGCTGCCCCACTCGCTGCGGAAGATGTTGGCACCTGTGAGGCTGCCATCCTCCCAGCGGGGGCCTTaGCAAAGCCAGTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SRLPHSLRKMLAPVRLPSSQRGP*QSQFPA
Trigger: AGCAGGAAACTGGCTTTGCCAAGGCCCCCGCTGGGA...GGATGGCAGCCTCACAGGTGCCAACATCTTCCGCAGCGAGTGGGGCAGCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGCATAGCCCTCGTAGATaGGGAAGACTTTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQHSPRR*GRLWHP
Trigger: TGGGTGCCAAAGTCTTCCTCATCTACGAGGGCTATG...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp GTGCCAGGGACGTTGTTGCTGATGGTGGCTGGGATGACACACATGACGATGCAGGTGGAGCCTCGGGGATaGACAGCCAGTCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VPGTLLLMVAGMTHMTMQVEPRG*TASRPL
Trigger: CAGGGGCCGACTGGCTGTTCATCCCCGAGGCTCCAC...CTGCATCGTCATGTGTGTCATCCCAGCCACCATCAGCAACAACGTCCCTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp AGCAGGCTGCCCCACTCGCTGCGGAAGATGTTGGCACCTGTGAGGCTGCCATCCCCAGCCTCTCACACATaGAGTTCTCCCAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SRLPHSLRKMLAPVRLPSPASHT*SSPSRP
Trigger: AGGACGGCTGGGAGAACTTCATGTGTGAGAGGCTGG...GGATGGCAGCCTCACAGGTGCCAACATCTTCCGCAGCGAGTGGGGCAGCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp TACCGGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGATCGAAGCCCAGCCTCTaGACCACCAGGTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: YRPGRARAGPCSEPSMGRSKPSL*TTRSFT
Trigger: CGTGAAGGACCTGGTGGTTCAGAGGCTGGGCTTCGA...TCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCCGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CAGTCGGCCCCTGAGGCCAGTGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCCTTCGAAGCCATCGTaGACCACGTATACTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QSAPEASADTSARYPQCRPSKPS*TTYTVC
Trigger: ACACACAGTATACGTGGTGCACGATGGCTTCGAAGG...CCGGCACTGCGGGTACCTGGCGCTGGTATCTGCACTGGCCTCAGGGGCCGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp CCAGCACAGTTACACGGGTGTCGAAGCCCAGCCTCTGAACCACCAGGTCCTTCAGGAGCGCCACCCTGCTaGAGGTGGCCCAGGACATTG +
Preference number: 4 (lower is better)
Translates to: PAQLHGCRSPASEPPGPSGAPPC*RWPRTL
Trigger: CAATGTCCTGGGCCACCTGCAGCAGGGTGGCGCTCC...TGAAGGACCTGGTGGTTCAGAGGCTGGGCTTCGACACCCGTGTAACTGTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp ATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCAGCCGCACTGATGCGGTATTGTaGCAGCATCTTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: MGDAGPHRRAHGRIHASRTDAVL*QHLQHE
Trigger: CTCATGCTGAAGATGCTGGCACAATACCGCATCAGT...GCGGCTGGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp CAGCGCCATCACCGCCTCCATGCCCATCTTGCTGCTCAGGATCCGGTCGAAGGCGCAAAGCCAGTTTCCTaGTGGGGGCTCCTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: QRHHRLHAHLAAQDPVEGAKPVS*WGLLLK
Trigger: CTTGAGCAGGAGCCCCCAGCAGGAAACTGGCTTTGC...GCCTTCGACCGGATCCTGAGCAGCAAGATGGGCATGGAGGCGGTGATGGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp CCAGCACAGTTACACGGGTGTCGAAGCCCAGCCTCTGAACCACCAGGTCCTTCAGGCAGCCGCACTGACTaGTTCCCCGAGAGGGTGACC +
Preference number: 4 (lower is better)
Translates to: PAQLHGCRSPASEPPGPSGSRTD*FPERVT
Trigger: GGTCACCCTCTCGGGGAACCAGTCAGTGCGGCTGCC...TGAAGGACCTGGTGGTTCAGAGGCTGGGCTTCGACACCCGTGTAACTGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGCTTTCTGCACTTCCTTaGTCATCTGCACGCACTCCA +
Preference number: 4 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKLSALP*SSARTP
Trigger: TGGAGTGCGTGCAGATGACCAAGGAAGTGCAGAAAG...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp TGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCCCATCACTTCCAGCACGAAACAATGGACTCCAGCTaGCCCTTGGGCAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CRYQRQVPAVPAHHFQHETMDSS*PLGRVL
Trigger: GAGGACCCTGCCCAAGGGCCAGCTGGAGTCCATTGT...TTCGTGCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGCGCTGGTATCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCGTTGCTGATGGTGGCTaGGATGACACACATGACGAT +
Preference number: 4 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGVADGG*DDTHDD
Trigger: ATCGTCATGTGTGTCATCCCAGCCACCATCAGCAAC...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CGCCGGGGCCCCCACATTCAGGATGGCCAGGGAGAAGTTAGACTTCTCCTTGGGCCACCACTGCTCCCGTaGCATGCGGTGCTCGAAATC +
Preference number: 4 (lower is better)
Translates to: RRGPHIQDGQGEVRLLLGPPLLP*HAVLEI
Trigger: GATTTCGAGCACCGCATGCCACGGGAGCAGTGGTGG...CCCAAGGAGAAGTCTAACTTCTCCCTGGCCATCCTGAATGTGGGGGCCCCGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp TACCGGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGAGCCAGTTGGCCTGCTTaGTGTTCTCACCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: YRPGRARAGPCSEPSMGRASWPA*CSHLPP
Trigger: TGGAGGGAGGTGAGAACATCAAGCAGGCCAACTGGC...TCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCCGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GTGCCAGGGACGTTGTTGCTGATGGTGGCTGGGATGACACACATGACGATGCAGAGGCTCAGCCACCACTaGTCCCGTGGCATGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VPGTLLLMVAGMTHMTMQRLSHH*SRGMRC
Trigger: GCACCGCATGCCACGGGAGCAGTGGTGGCTGAGCCT...CTGCATCGTCATGTGTGTCATCCCAGCCACCATCAGCAACAACGTCCCTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp CGAGAGGACTCTCGACCTCTACCCTGGTTACACATGCTTCTCATCCGCTCTCCACTTGTCAGGGGACCTTaGGCGTCGCCGCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: REDSRPLPWLHMLLIRSPLVRGP*ASPPLV
Trigger: GACCAGCGGCGGCGACGCGCAAGGTCCCCTGACAAG...TGGAGAGCGGATGAGAAGCATGTGTAACCAGGGTAGAGGTCGAGAGTCCTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp TACACATGCTTCTCATCCGCTCTCCAGCTTGGCGTGGGGCTCAGCAGCAGGGAGTCTTTCCTGTCCCCTTaGCCTCGGCTCCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: YTCFSSALQLGVGLSSRESFLSP*PRLPGL
Trigger: CAGTCCTGGGAGCCGAGGGCAAGGGGACAGGAAAGA...CTCCCTGCTGCTGAGCCCCACGCCAAGCTGGAGAGCGGATGAGAAGCATGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp CTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACACTTTCTGCACTTCCTTaGTCATCTGCACGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LRAHGAPKPGGSSLQTPTLSALP*SSARTP
Trigger: TGGAGTGCGTGCAGATGACCAAGGAAGTGCAGAAAG...TGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GTAGCTGGACGAGATGGGCTTCCCGTTGCGGTCAATGGCACCCTCAGCGATGATTGGGCAGGGTCCTCTTaGTCCCCAGCATGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VAGRDGLPVAVNGTLSDDWAGSS*SPAWSH
Trigger: GTGGCTCCATGCTGGGGACCAAGAGGACCCTGCCCA...ATCATCGCTGAGGGTGCCATTGACCGCAACGGGAAGCCCATCTCGTCCAGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp TGGAGACCCCCACGAGAGGACTCTCGACCTCTACCCTGGTTACACATGCTTCTCGGGCGTGGGCATGGCTaGCCTCAGAAGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: WRPPREDSRPLPWLHMLLGRGHG*PQKPLS
Trigger: GGACAAGGGCTTCTGAGGCCAGCCATGCCCACGCCC...GAGAAGCATGTGTAACCAGGGTAGAGGTCGAGAGTCCTCTCGTGGGGGTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp CGAGAGGACTCTCGACCTCTACCCTGGTTACACATGCTTCTCATCCGCTCTCCACAGCGCCACGTCCCCTaGGCAGGAAGGTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: REDSRPLPWLHMLLIRSPQRHVP*AGRWMP
Trigger: GGGCATCCACCTTCCTGCCCAGGGGACGTGGCGCTG...TGGAGAGCGGATGAGAAGCATGTGTAACCAGGGTAGAGGTCGAGAGTCCTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp GTGTCCATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCTCTCGACCTCTACCCTaGTTACACATGCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: VSMGDAGPHRRAHGRIHASRPLP*LHMLLI
Trigger: GATGAGAAGCATGTGTAACCAGGGTAGAGGTCGAGA...GGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CAA 72 bp ACCCTGGTTACACATGCTTCTCATCCGCTCTCCAGCTaGGCGTGGGGCTCAGCAGCAGGGAGCAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: TLVTHASHPLSS*AWGSAAGSRCE
Trigger: CTCACACCTGCTCCCTGCTGCTGAGCCCCACGCCAAGCTGGAGAGCGGATGAGAAGCATGTGTAACCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CAA 72 bp CCGCCCAGCTGGATGATGTTGGAGACGCTCAGCCAGTaGGCCTGCTTGATGTTCTCACCTCCCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: PPSWMMLETLSQ*ACLMFSPPSTR
Trigger: CCTCGTGGAGGGAGGTGAGAACATCAAGCAGGCCAACTGGCTGAGCGTCTCCAACATCATCCAGCTGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp CTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGTAGAGCAAGGGCTGCTCAGCCAGTTGGCCTaGTTGATGTTCTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: LSTQPRRQQPTGQVEQGLLSQLA*LMFSPP
Trigger: GGGAGGTGAGAACATCAAGCAGGCCAACTGGCTGAG...CAGCCCTTGCTCTACCTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGTCATCCATGGCTTTCTaGACTTCCTTGGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQSSMAF*TSLVIC
Trigger: GCAGATGACCAAGGAAGTGCAGAAAGCCATGGATGA...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGCGTGAATACCATAGATaGGGATGTTCTCCACAATGG +
Preference number: 4 (lower is better)
Translates to: RQSQGAAASKHRQRHVPWREYHR*GCSPQW
Trigger: CCATTGTGGAGAACATCCGCATCTATGGTATTCACG...CCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGATCTTCTCCGTCATGTaGTCCACGTTGACCTTTAAG +
Preference number: 4 (lower is better)
Translates to: RQSQGAAASKHRQRHVPWIFSVM*STLTFK
Trigger: CTTAAAGGTCAACGTGGAGCACATGACGGAGAAGAT...CCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp TGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCCCATCACTTCCAGCACGAAAGAAAAGGTGACAGGTaGTGCACGTGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CRYQRQVPAVPAHHFQHERKGDR*CTWAGA
Trigger: TGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCT...TTCGTGCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGCGCTGGTATCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp GTGTCCATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCTTGACCTTTAAGTCGTaGATGTTGAAAGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: VSMGDAGPHRRAHGRIHALTFKS*MLKGSS
Trigger: CGAGGACCCTTTCAACATCCACGACTTAAAGGTCAA...GGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp CTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACATGTACAGGAACTCCGTaGTGTAGTAGTCATGGCACT +
Preference number: 4 (lower is better)
Translates to: LRAHGAPKPGGSSLQTPTCTGTP*CSSHGT
Trigger: AGTGCCATGACTACTACACCACGGAGTTCCTGTACA...TGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GTGCCAGGGACGTTGTTGCTGATGGTGGCTGGGATGACACACATGACGATGCAGCCACCCTGCTGCAGGTaGCCCAGGACATTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VPGTLLLMVAGMTHMTMQPPCCR*PRTLVL
Trigger: CAGGACCAATGTCCTGGGCCACCTGCAGCAGGGTGG...CTGCATCGTCATGTGTGTCATCCCAGCCACCATCAGCAACAACGTCCCTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp CGAGAGGACTCTCGACCTCTACCCTGGTTACACATGCTTCTCATCCGCTCTCCACACGCAGGCCGAGTCTaGGGCATTGGCGAACACCCG +
Preference number: 4 (lower is better)
Translates to: REDSRPLPWLHMLLIRSPHAGRV*GIGEHP
Trigger: CGGGTGTTCGCCAATGCCCCAGACTCGGCCTGCGTG...TGGAGAGCGGATGAGAAGCATGTGTAACCAGGGTAGAGGTCGAGAGTCCTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
3UTR CAA 72 bp TCCCGTGGCATGCGGTGCTCGAAATCAGTGTCTTTCTaGAGCTCAGTGACGGGGCTGAAGGCCACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SRGMRCSKSVSF*SSVTGLKATAF
Trigger: GAAGGCGGTGGCCTTCAGCCCCGTCACTGAGCTCAAGAAAGACACTGATTTCGAGCACCGCATGCCACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp CCAGCACAGTTACACGGGTGTCGAAGCCCAGCCTCTGAACCACCAGGTCCTTCACCTACTTCTTGCACCTaGCCCTTGGCTAGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: PAQLHGCRSPASEPPGPSPTSCT*PLARPS
Trigger: CGAAGGCCTAGCCAAGGGTCAGGTGCAAGAAGTAGG...TGAAGGACCTGGTGGTTCAGAGGCTGGGCTTCGACACCCGTGTAACTGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp GCTTCTCCGACAACCACAGCATGGCCTTCACCCCCAGCTTGGTCCCATAGTTCCCCGAGGCAGACTGTTTaGTGCGGTCACAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ASPTTTAWPSPPAWSHSSPRQTV*CGHSSP
Trigger: TGGAGAGCTGTGACCGCATCAAACAGTCTGCCTCGG...GGAACTATGGGACCAAGCTGGGGGTGAAGGCCATGCTGTGGTTGTCGGAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTCAGGTTGTAGGCCGCTaGCCGGCGCCCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGQVVGR*PAPLPG
Trigger: ACCAGGGAGGGGCGCCGGGCAGCGGCCTACAACCTG...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTCCTTCGAAGCCATCGTaGACCACGTATACTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDAPSKPS*TTYTVC
Trigger: ACACACAGTATACGTGGTGCACGATGGCTTCGAAGG...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp CGCCGGGGCCCCCACATTCAGGATGGCCAGGGAGAAGTTAGACTTCTCCTTGGGAGTCGAAGACGCCCTTaGCCTCTGATGAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: RRGPHIQDGQGEVRLLLGSRRRP*PLMSTG
Trigger: ACCTGTACTCATCAGAGGGCAAGGGCGTCTTCGACT...CCCAAGGAGAAGTCTAACTTCTCCCTGGCCATCCTGAATGTGGGGGCCCCGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp CTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACATTGACCTTTAAGTCGTaGATGTTGAAAGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LRAHGAPKPGGSSLQTPTLTFKS*MLKGSS
Trigger: CGAGGACCCTTTCAACATCCACGACTTAAAGGTCAA...TGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CGAGAGGACTCTCGACCTCTACCCTGGTTACACATGCTTCTCATCCGCTCTCCAATCCGCTCTCCAGCTTaGCGTGGGGCTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: REDSRPLPWLHMLLIRSPIRSPA*RGAQQQ
Trigger: CTGCTGCTGAGCCCCACGCCAAGCTGGAGAGCGGAT...TGGAGAGCGGATGAGAAGCATGTGTAACCAGGGTAGAGGTCGAGAGTCCTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR TCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTTTAAGTCGTGGATGTTaGAAGGGTCCTCGAAGACGT +
Preference number: 4 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDALSRGC*KGPRRR
Trigger: ACGTCTTCGAGGACCCTTTCAACATCCACGACTTAA...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp TGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCCCATCACTTCCAGCACGAATTAAGTCGTGGATGTTaGAAGGGTCCTCGAAGACGT +
Preference number: 4 (lower is better)
Translates to: CRYQRQVPAVPAHHFQHELSRGC*KGPRRR
Trigger: ACGTCTTCGAGGACCCTTTCAACATCCACGACTTAA...TTCGTGCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGCGCTGGTATCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp CTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGTAGAGCAAGGGCTGTCATCCATGGCTTTCTaGACTTCCTTGGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: LSTQPRRQQPTGQVEQGLSSMAF*TSLVIC
Trigger: GCAGATGACCAAGGAAGTGCAGAAAGCCATGGATGA...CAGCCCTTGCTCTACCTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTATCTTCTCCGTCATGTaGTCCACGTTGACCTTTAAG +
Preference number: 4 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDAIFSVM*STLTFK
Trigger: CTTAAAGGTCAACGTGGAGCACATGACGGAGAAGAT...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp TACCGGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGAACTGATGCGGTATTGTaGCAGCATCTTCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: YRPGRARAGPCSEPSMGRTDAVL*QHLQHE
Trigger: CTCATGCTGAAGATGCTGGCACAATACCGCATCAGT...TCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp CAGGGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCACCTCGGCAGCTCCCTTaGACATGGAGACCCCCACGA +
Preference number: 4 (lower is better)
Translates to: QGDFISRKGDRCCTWAGAPRQLP*TWRPPR
Trigger: TCGTGGGGGTCTCCATGTTCAAGGGAGCTGCCGAGG...TGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR GCA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTGGCTGCCCCACTCGCTaGGGAAGATGTTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGGCPTR*GRCWHL
Trigger: CAGGTGCCAACATCTTCCGCAGCGAGTGGGGCAGCC...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp TACCGGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGTGAATACCATAGATaGGGATGTTCTCCACAATGG +
Preference number: 4 (lower is better)
Translates to: YRPGRARAGPCSEPSMGRREYHR*GCSPQW
Trigger: CCATTGTGGAGAACATCCGCATCTATGGTATTCACG...TCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCCGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CAGGGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCATCTTGGTCCCCAGCATaGAGCCACCACGCCCCAACC +
Preference number: 4 (lower is better)
Translates to: QGDFISRKGDRCCTWAGASWSPA*SHHAPT
Trigger: GGTTGGGGCGTGGTGGCTCCATGCTGGGGACCAAGA...TGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CAGGGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCACCACCCTGCTGCAGGTaGCCCAGGACATTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: QGDFISRKGDRCCTWAGAPPCCR*PRTLVL
Trigger: CAGGACCAATGTCCTGGGCCACCTGCAGCAGGGTGG...TGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTCCGAGTCTGGGGCATTaGCGAACACCCGTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGPSLGH*RTPVPC
Trigger: GCAAGGGACGGGTGTTCGCCAATGCCCCAGACTCGG...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR GCA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTAGAAGCCCTTGTCCATaGTCAGGGTGCGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGRSPCP*SGCGGS
Trigger: TGACCCGCCGCACCCTGAGCATGGACAAGGGCTTCT...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp TGGAGACCCCCACGAGAGGACTCTCGACCTCTACCCTGGTTACACATGCTTCTCGTTGCTGATGGTGGCTaGGATGACACACATGACGAT +
Preference number: 4 (lower is better)
Translates to: WRPPREDSRPLPWLHMLLVADGG*DDTHDD
Trigger: ATCGTCATGTGTGTCATCCCAGCCACCATCAGCAAC...GAGAAGCATGTGTAACCAGGGTAGAGGTCGAGAGTCCTCTCGTGGGGGTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CCA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTCACCACGGAGCTGGGTaGCCTCGTCAAACCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGHHGAG*PRQTSC
Trigger: ACAAGAGGTTTGACGAGGCCACCCAGCTCCGTGGTG...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp CAGGGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCACACCACGGAGCTGGGTaGCCTCGTCAAACCTCTTGT +
Preference number: 4 (lower is better)
Translates to: QGDFISRKGDRCCTWAGAHHGAG*PRQTSC
Trigger: ACAAGAGGTTTGACGAGGCCACCCAGCTCCGTGGTG...TGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CCA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTTATACTGTGTGTCCATaGGAGATGCCGGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGYTVCP*EMPVRT
Trigger: GGTGCGGACCGGCATCTCCCATGGACACACAGTATA...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR TCA 90 bp CAGGGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAAGCACCAGGCCCCTCTaGATGTCTGTCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: QGDFISRKGDRCCTWAGASTRPL*MSVFIF
Trigger: GAAGATGAAGACAGACATTCAGAGGGGCCTGGTGCT...TGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS GCA 90 bp CATCCCCTCGCCATGCCCAGATCCCTGTGCACTGGGCCCTGCCCGTaGCACCGCCCAGGGTCTCCTGTGGTACCACACCTCCCAGCCCGC +
Preference number: 5 (lower is better)
Translates to: HPLAMPRSLCTGPCP*HRPGSPVVPHLPAR
Trigger: GCGGGCTGGGAGGTGTGGTACCACAGGAGACCCTGGGCGGTGGCACGGGCAGGGCCCAGTGCACAGGGATCTGGGCATGGCGAGGGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS GCA 90 bp GAGGACCCTGCCTGCTCTCTCCAGCTCCAAGTCCAGGCCAGAAGCTaGCTCCCGAGGCCGGCAGTCGGCTGCCCCTGCTGCAGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: EDPACSLQLQVQARS*LPRPAVGCPCCRWP
Trigger: GGGCCACCTGCAGCAGGGGCAGCCGACTGCCGGCCTCGGGAGGCAGCTTCTGGCCTGGACTTGGAGCTGGAGAGAGCAGGCAGGGTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS GCA 90 bp CACCTAGATACAGGCCTCGGTCCCCTCACTGGGGAAGGGCACACGTaGCCGAGGGCCTGCCGGGAGTGCCCGTGGGTGCCCGTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: HLDTGLGPLTGEGHT*PRACRECPWVPVRA
Trigger: AGCCCTCACGGGCACCCACGGGCACTCCCGGCAGGCCCTCGGGCACGTGTGCCCTTCCCCAGTGAGGGGACCGAGGCCTGTATCTAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474114.5
ENST00000495274.1
ENST00000498841.5
CDS CCA 90 bp GTCCAGGCCAGAAGCTGCCTCCCGAGGCCGGCAGTCGGCTGCCCCTaGCCAAGTCAAGTGACTCCTGGGCCCTGCATCGGCAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: VQARSCLPRPAVGCP*PSQVTPGPCIGSQR
Trigger: CCGCTGGCTGCCGATGCAGGGCCCAGGAGTCACTTGACTTGGCCAGGGGCAGCCGACTGCCGGCCTCGGGAGGCAGCTTCTGGCCTGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474114.5
ENST00000498841.5
CDS-3UTR CAA 90 bp CCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGGGGGCCTGGTGGGCTaGTCAGGGGACCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: PMGRQSQGAAASKHRQRHGGLVG*SGDLAR
Trigger: ACGCGCAAGGTCCCCTGACAAGCCCACCAGGCCCCC...GTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS GCA 90 bp CCCTTGTGTCTGGTGAAGCCTTCCAGGCGGGAAGACGCACAGGGCTaGAGCTCCACGGGGCACAGGGCAGAGGGGCCTGCCCGGGCTAGC +
Preference number: 5 (lower is better)
Translates to: PLCLVKPSRREDAQG*SSTGHRAEGPARAS
Trigger: GCTAGCCCGGGCAGGCCCCTCTGCCCTGTGCCCCGTGGAGCTGCAGCCCTGTGCGTCTTCCCGCCTGGAAGGCTTCACCAGACACAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS GCA 90 bp CCCAGGACGCGGGCTTCCTGCAGGGCCACCATAAGGCAGGGAGCATaGGGGGATCTAGGTGAGGGGTTCGGCGGAAGTGGCCGCGGGAGG +
Preference number: 5 (lower is better)
Translates to: PRTRASCRATIRQGA*GDLGEGFGGSGRGR
Trigger: CCTCCCGCGGCCACTTCCGCCGAACCCCTCACCTAGATCCCCGCATGCTCCCTGCCTTATGGTGGCCCTGCAGGAAGCCCGCGTCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474114.5
ENST00000495274.1
ENST00000498841.5
CDS-3UTR CAA 90 bp ATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCAGCCGCTCCGGTCAAAGGGGGTaGGAGCGCCACCCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: MGDAGPHRRAHGRIHASRSGQRG*ERHPAA
Trigger: TGCAGCAGGGTGGCGCTCCAACCCCCTTTGACCGGA...GCGGCTGGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS GCA 90 bp AAGGGAGGACCAGACTCAGGCTGGGCCACGCTGTCTGCCCCGGCCTaGAGCTCCGGCTGTGGCTCAAGGGGCTTGGGAGCCAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: KGGPDSGWATLSAPA*SSGCGSRGLGARTS
Trigger: TGAGGTCCTGGCTCCCAAGCCCCTTGAGCCACAGCCGGAGCTGCAGGCCGGGGCAGACAGCGTGGCCCAGCCTGAGTCTGGTCCTCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS GCA 90 bp GACCCACGGCTCCGAGTCTGGGTCAAAGACACGACAGGGCTCAGCTaGCAGGCAGGGAAACCTGCCCCGGACACAGCCCCCGGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: DPRLRVWVKDTTGLS*QAGKPAPDTAPGCQ
Trigger: CTGGCACCCGGGGGCTGTGTCCGGGGCAGGTTTCCCTGCCTGGCAGCTGAGCCCTGTCGTGTCTTTGACCCAGACTCGGAGCCGTGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS CCA 90 bp GGGCCTCTCTGGTCTCCCCAGCTCCAGGCGGAGTCAATGTGCCACTaGGCGGGTCAGCCCAGGGTCACAGCCATCTCAGCAGGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GPLWSPQLQAESMCH*AGQPRVTAISAGGL
Trigger: CAGGCCCCCTGCTGAGATGGCTGTGACCCTGGGCTGACCCGCCCAGTGGCACATTGACTCCGCCTGGAGCTGGGGAGACCAGAGAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397961.6
ENST00000496824.5
CDS CCA 90 bp AGCGCCACCCTGGAAACAGGTGAGGCCCGGTTCCCTGGACTCCCCTaGGCTGCCTGGGCCAAGGCCAACGCCAGTGCAGACAGGATCCCC +
Preference number: 5 (lower is better)
Translates to: SATLETGEARFPGLP*AAWAKANASADRIP
Trigger: GGGGATCCTGTCTGCACTGGCGTTGGCCTTGGCCCAGGCAGCCCAGGGGAGTCCAGGGAACCGGGCCTCACCTGTTTCCAGGGTGGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS-3UTR CAA 90 bp GTGTCCATGGGAGATGCCGGTCCGCACCGCCGAGCGCACGGCCGCATTCATGCCGACTCCAGCTGGCCCTaGGGCAGGGTCCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: VSMGDAGPHRRAHGRIHADSSWP*GRVLLV
Trigger: GACCAAGAGGACCCTGCCCAAGGGCCAGCTGGAGTC...GGCATGAATGCGGCCGTGCGCTCGGCGGTGCGGACCGGCATCTCCCATGGACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp GACGCTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCTCCGGTCAAAGGGGGTaGGAGCGCCACCCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: DAEGPWGAKARGQQPPNTSGQRG*ERHPAA
Trigger: TGCAGCAGGGTGGCGCTCCAACCCCCTTTGACCGGA...GGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGGCCGAGTCTGGGGCATaGGCGAACACCCGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKAESGA*ANTRPL
Trigger: CAAGGGACGGGTGTTCGCCAATGCCCCAGACTCGGC...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CAGTCGGCCCCTGAGGCCAGTGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGGCCGAGTCTGGGGCATaGGCGAACACCCGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: QSAPEASADTSARYPQCRAESGA*ANTRPL
Trigger: CAAGGGACGGGTGTTCGCCAATGCCCCAGACTCGGC...CCGGCACTGCGGGTACCTGGCGCTGGTATCTGCACTGGCCTCAGGGGCCGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS TCA 90 bp CTGGGCCCAGCACACACACAGCTGGGGCTGGGCCCTTGTGTCTGGTaGAGCCTTCCAGGCGGGAAGACGCACAGGGCTGCAGCTCCACGG +
Preference number: 5 (lower is better)
Translates to: LGPAHTQLGLGPCVW*SLPGGKTHRAAAPR
Trigger: CCGTGGAGCTGCAGCCCTGTGCGTCTTCCCGCCTGGAAGGCTTCACCAGACACAAGGGCCCAGCCCCAGCTGTGTGTGTGCTGGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS GCA 90 bp GCAGCAGACACCGCGCATGCCAGGCAGGGCACCTTCCACAGAAGGTaGGAGACCCCCAACACAACACGAGGCCACGCCAGCCCGTGCAGC +
Preference number: 5 (lower is better)
Translates to: AADTAHARQGTFHRR*ETPNTTRGHASPCS
Trigger: GCTGCACGGGCTGGCGTGGCCTCGTGTTGTGTTGGGGGTCTCGCACCTTCTGTGGAAGGTGCCCTGCCTGGCATGCGCGGTGTCTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460020.5
ENST00000466134.5
ENST00000467315.5
ENST00000474114.5
ENST00000498841.5
CDS CCA 90 bp GCTAGAGCCACGGGGGCCCCTGGCCTTGCCCTGCATGGTCGGGTGTaGGCGAAGGACAGCCTGAATGGCCCGTGCCTCTGGTCCACCATT +
Preference number: 5 (lower is better)
Translates to: ARATGAPGLALHGRV*AKDSLNGPCLWSTI
Trigger: AATGGTGGACCAGAGGCACGGGCCATTCAGGCTGTCCTTCGCCCACACCCGACCATGCAGGGCAAGGCCAGGGGCCCCCGTGGCTCTAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS CCA 90 bp GCTCAAGGGAGGGTTGGCCACCTTGGTAGCGGGTGGAGGCACGCATaGGAACCCAGACGTCCAATCCAGCCTGACCCGGCCGCCAGGACG +
Preference number: 5 (lower is better)
Translates to: AQGRVGHLGSGWRHA*EPRRPIQPDPAART
Trigger: CGTCCTGGCGGCCGGGTCAGGCTGGATTGGACGTCTGGGTTCCCATGCGTGCCTCCACCCGCTACCAAGGTGGCCAACCCTCCCTTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS-3UTR CAA 90 bp GAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCCCGATGACGCACAGGTaGGTGATGCCGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: EGPWGAKARGQQPPNTDSPMTHR*VMPCWT
Trigger: GGTCCAGCACGGCATCACCAACCTGTGCGTCATCGG...GCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGCCTCCATGCCCATCTaGCTGCTCAGGATCCGGTCG +
Preference number: 5 (lower is better)
Translates to: LEGLAGWSQDTSPREAWQASMPI*LLRIRS
Trigger: CGACCGGATCCTGAGCAGCAAGATGGGCATGGAGGC...CTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GACGCTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCTGGCCTCAGAAGCCCTaGTCCATGCTCAGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: DAEGPWGAKARGQQPPNTWPQKP*SMLRVR
Trigger: CCGCACCCTGAGCATGGACAAGGGCTTCTGAGGCCA...GGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GTCCTCCTGCTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGTCCCAGCGGGGGCCTaGGCAAAGCCAGTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: VLLLEGLAGWSQDTSPREVPAGA*AKPVSC
Trigger: GCAGGAAACTGGCTTTGCCAAGGCCCCCGCTGGGAC...CTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS TCA 90 bp GTGACGGCCGCCACCACCTCCCCTCCACCCACCGTGCTGAGGCTCTaGACCTGGCGTGCACCTGTCACGTGCAGCACATCCCACTTGGCA +
Preference number: 5 (lower is better)
Translates to: VTAATTSPPPTVLRL*TWRAPVTCSTSHLA
Trigger: TGCCAAGTGGGATGTGCTGCACGTGACAGGTGCACGCCAGGTTCAGAGCCTCAGCACGGTGGGTGGAGGGGAGGTGGTGGCGGCCGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS TCA 90 bp CCAGGAGGCTGGTCACAGGCACACGGCCCGATGGAAGCTCAGCCATaGGGCAGCAGACACCGCGCATGCCAGGCAGGGCACCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: PGGWSQAHGPMEAQP*GSRHRACQAGHLPQ
Trigger: CTGTGGAAGGTGCCCTGCCTGGCATGCGCGGTGTCTGCTGCCTCATGGCTGAGCTTCCATCGGGCCGTGTGCCTGTGACCAGCCTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460020.5
ENST00000466134.5
ENST00000467315.5
ENST00000474114.5
ENST00000498841.5
CDS GCA 90 bp ACCACAGGGCCTCTCTGGTCTCCCCAGCTCCAGGCGGAGTCAATGTaGCACTGGGCGGGTCAGCCCAGGGTCACAGCCATCTCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: TTGPLWSPQLQAESM*HWAGQPRVTAISAG
Trigger: CCCTGCTGAGATGGCTGTGACCCTGGGCTGACCCGCCCAGTGGCACATTGACTCCGCCTGGAGCTGGGGAGACCAGAGAGGCCCTGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397961.6
ENST00000496824.5
CDS CCA 90 bp GGCCGGCATCCAGCTCAAGGGAGGGTTGGCCACCTTGGTAGCGGGTaGAGGCACGCATGGGAACCCAGACGTCCAATCCAGCCTGACCCG +
Preference number: 5 (lower is better)
Translates to: GRHPAQGRVGHLGSG*RHAWEPRRPIQPDP
Trigger: CGGGTCAGGCTGGATTGGACGTCTGGGTTCCCATGCGTGCCTCCACCCGCTACCAAGGTGGCCAACCCTCCCTTGAGCTGGATGCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS-3UTR CAA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTAGCAGCGTTCATGCCTaGCGCGTCGCCGCCGCTGGT +
Preference number: 5 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDASSVHA*RVAAAG
Trigger: ACCAGCGGCGGCGACGCGCAAGGCATGAACGCTGCT...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349048.9
CDS-3UTR CAA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCAGAGATGGGCTTCCCGTaGCGGTCAATGGCACCCTCA +
Preference number: 5 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPEMGFP*RSMAPS
Trigger: TGAGGGTGCCATTGACCGCAACGGGAAGCCCATCTC...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGGTGCCAGGGACGTTGTaGCTGATGGTGGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKVPGTL*LMVAGM
Trigger: CATCCCAGCCACCATCAGCAACAACGTCCCTGGCAC...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGCCCGAGGCAGACTGTTaGATGCGGTCACAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RQSQGAAASKHRQRHVPWPEADC*MRSQLS
Trigger: GGAGAGCTGTGACCGCATCAAACAGTCTGCCTCGGG...CCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GACGCTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCCCCGAGGCAGACTGTTaGATGCGGTCACAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: DAEGPWGAKARGQQPPNTPEADC*MRSQLS
Trigger: GGAGAGCTGTGACCGCATCAAACAGTCTGCCTCGGG...GGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCATGAACACACGGCGCTaGGTCCCCGAGGCAGACTGT +
Preference number: 5 (lower is better)
Translates to: EGPWGAKARGQQPPNTDSMNTRR*VPEADC
Trigger: ACAGTCTGCCTCGGGGACCAAGCGCCGTGTGTTCAT...GCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTAGGTGGCCCAGGACATaGGTCCTGCAGTCGAAGACG +
Preference number: 5 (lower is better)
Translates to: GGPGRLVSRHQPEGGLAGRWPRT*VLQSKT
Trigger: CGTCTTCGACTGCAGGACCAATGTCCTGGGCCACCT...ACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGAGGTGGCCCAGGACATaGGTCCTGCAGTCGAAGACG +
Preference number: 5 (lower is better)
Translates to: RQSQGAAASKHRQRHVPWRWPRT*VLQSKT
Trigger: CGTCTTCGACTGCAGGACCAATGTCCTGGGCCACCT...CCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS TCA 90 bp CCGCATCGCTGGCACCAGCCAGGGCTCCCCGGACACCCTGCACCCTaGAGCCACTGTGGGTCCACACTGGTGCACATAGGACACACCATC +
Preference number: 5 (lower is better)
Translates to: PHRWHQPGLPGHPAP*SHCGSTLVHIGHTI
Trigger: GATGGTGTGTCCTATGTGCACCAGTGTGGACCCACAGTGGCTTCAGGGTGCAGGGTGTCCGGGGAGCCCTGGCTGGTGCCAGCGATGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS GCA 90 bp CATAGCCACATGGCCCCACTGGGTCCTGGTACGAGCCAGCCCTGCTaGCCACAAAGCCAGTCACGCCCCTGCCAGGTTCTGGGTTCGTGG +
Preference number: 5 (lower is better)
Translates to: HSHMAPLGPGTSQPC*PQSQSRPCQVLGSW
Trigger: CCACGAACCCAGAACCTGGCAGGGGCGTGACTGGCTTTGTGGGCAGCAGGGCTGGCTCGTACCAGGACCCAGTGGGGCCATGTGGCTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS GCA 90 bp CTCCATAGCCACATGGCCCCACTGGGTCCTGGTACGAGCCAGCCCTaGTGCCCACAAAGCCAGTCACGCCCCTGCCAGGTTCTGGGTTCG +
Preference number: 5 (lower is better)
Translates to: LHSHMAPLGPGTSQP*CPQSQSRPCQVLGS
Trigger: CGAACCCAGAACCTGGCAGGGGCGTGACTGGCTTTGTGGGCAGCAGGGCTGGCTCGTACCAGGACCCAGTGGGGCCATGTGGCTATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS GCA 90 bp CACCACCTCCCCTCCACCCACCGTGCTGAGGCTCTGAACCTGGCGTaGACCTGTCACGTGCAGCACATCCCACTTGGCAGCAGCCACACC +
Preference number: 5 (lower is better)
Translates to: HHLPSTHRAEALNLA*TCHVQHIPLGSSHT
Trigger: GGTGTGGCTGCTGCCAAGTGGGATGTGCTGCACGTGACAGGTGCACGCCAGGTTCAGAGCCTCAGCACGGTGGGTGGAGGGGAGGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS GCA 90 bp AGAAGGTGCGAGACCCCCAACACAACACGAGGCCACGCCAGCCCGTaGAGCAAAGCACGTGGCCGGCATCCAGCTCAAGGGAGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: RRCETPNTTRGHASP*SKARGRHPAQGRVG
Trigger: GCCAACCCTCCCTTGAGCTGGATGCCGGCCACGTGCTTTGCTGCACGGGCTGGCGTGGCCTCGTGTTGTGTTGGGGGTCTCGCACCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS GCA 90 bp CAACCCGTGCACCGTTCCCGTCTGTTCCCGATCGAGGACCCTGCCTaGTCTCTCCAGCTCCAAGTCCAGGCCAGAAGCTGCCTCCCGAGG +
Preference number: 5 (lower is better)
Translates to: QPVHRSRLFPIEDPA*SLQLQVQARSCLPR
Trigger: CCTCGGGAGGCAGCTTCTGGCCTGGACTTGGAGCTGGAGAGAGCAGGCAGGGTCCTCGATCGGGAACAGACGGGAACGGTGCACGGGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS CCA 90 bp ATCCACAGCTTCTCATCCCCTCGCCATGCCCAGATCCCTGTGCACTaGGCCCTGCCCGTGCCACCGCCCAGGGTCTCCTGTGGTACCACA +
Preference number: 5 (lower is better)
Translates to: IHSFSSPRHAQIPVH*ALPVPPPRVSCGTT
Trigger: TGTGGTACCACAGGAGACCCTGGGCGGTGGCACGGGCAGGGCCCAGTGCACAGGGATCTGGGCATGGCGAGGGGATGAGAAGCTGTGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS-3UTR CAA 90 bp GCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACCCAGCTGGATGATGTaGGAGACGCTCAGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: AHGAPKPGGSSLQTPTAPPSWMM*ETLSQL
Trigger: CAACTGGCTGAGCGTCTCCAACATCATCCAGCTGGG...TGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGGCCAGGGATAGAGGCACCGATGACGCACAGGTaGGTGATGCCGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: GLKTPARGRPGRWPGIEAPMTHR*VMPCWT
Trigger: GGTCCAGCACGGCATCACCAACCTGTGCGTCATCGG...TGCCTCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCAGGAAGCAGTCGAAGACGCCCTaGCCCTCTGATGAGTACAGG +
Preference number: 5 (lower is better)
Translates to: PGGSSLQTPTAPRPLGRKQSKTP*PSDEYR
Trigger: CCTGTACTCATCAGAGGGCAAGGGCGTCTTCGACTG...CTTCCTGCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS GCA 90 bp CTTGTATCCACAGCTTCTCATCCCCTCGCCATGCCCAGATCCCTGTaGACTGGGCCCTGCCCGTGCCACCGCCCAGGGTCTCCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: LVSTASHPLAMPRSL*TGPCPCHRPGSPVV
Trigger: TACCACAGGAGACCCTGGGCGGTGGCACGGGCAGGGCCCAGTGCACAGGGATCTGGGCATGGCGAGGGGATGAGAAGCTGTGGATACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS GCA 90 bp CTTCCAACCCGTGCACCGTTCCCGTCTGTTCCCGATCGAGGACCCTaGCTGCTCTCTCCAGCTCCAAGTCCAGGCCAGAAGCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LPTRAPFPSVPDRGP*LLSPAPSPGQKLPP
Trigger: GGGAGGCAGCTTCTGGCCTGGACTTGGAGCTGGAGAGAGCAGGCAGGGTCCTCGATCGGGAACAGACGGGAACGGTGCACGGGTTGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS CCA 90 bp CAGGGATACCGTGTCAGTCCCAAACCCACCCTCTGCCCCCAGGGCTaGTTCCAGTGGTCCTGCCTCAGCCTCAGCGCACAGAGGACAGAG +
Preference number: 5 (lower is better)
Translates to: QGYRVSPKPTLCPQG*FQWSCLSLSAQRTE
Trigger: CTCTGTCCTCTGTGCGCTGAGGCTGAGGCAGGACCACTGGAACCAGCCCTGGGGGCAGAGGGTGGGTTTGGGACTGACACGGTATCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS CCA 90 bp GGCCTTCACCCCCAGCTTGGTCCCATAGTTCCGGTCAAAGGGGGTTaGAGCGCCACCCTGGAAACAGGTGAGGCCCGGTTCCCTGGACTC +
Preference number: 5 (lower is better)
Translates to: GLHPQLGPIVPVKGG*SATLETGEARFPGL
Trigger: GAGTCCAGGGAACCGGGCCTCACCTGTTTCCAGGGTGGCGCTCCAACCCCCTTTGACCGGAACTATGGGACCAAGCTGGGGGTGAAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS-3UTR CAA 90 bp GTCCTCCTGCTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGAGCCAGTTGGCCTGCTaGATGTTCTCACCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: VLLLEGLAGWSQDTSPRESQLAC*MFSPPS
Trigger: GGAGGGAGGTGAGAACATCAAGCAGGCCAACTGGCT...CTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGAGCCAGTTGGCCTGCTaGATGTTCTCACCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQSQLAC*MFSPPS
Trigger: GGAGGGAGGTGAGAACATCAAGCAGGCCAACTGGCT...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCGAGACGCTCAGCCAGTaGGCCTGCTTGATGTTCTCA +
Preference number: 5 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGETLSQ*ACLMFS
Trigger: TGAGAACATCAAGCAGGCCAACTGGCTGAGCGTCTC...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGGCCAGGGATAGAGGCACTGGTGGTAAAGGCCTaGCAGCGAGCGCTGCCAATG +
Preference number: 5 (lower is better)
Translates to: GLKTPARGRPGRWPGIEALVVKA*QRALPM
Trigger: CATTGGCAGCGCTCGCTGCAAGGCCTTTACCACCAG...TGCCTCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTGGCCAGGGATAGAGGCATCGCTGCGGAAGATGTaGGCACCTGTGAGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GLKTPARGRPGRWPGIEASLRKM*APVRLP
Trigger: TGGCAGCCTCACAGGTGCCAACATCTTCCGCAGCGA...TGCCTCTATCCCTGGCCACCTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GAAGTTCTCCCAGCCGTCCTCGGGTGGAGCCTCGGGGATGAACAGCCAGTCGGCTCGCTGCGGAAGATGTaGGCACCTGTGAGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: EVLPAVLGWSLGDEQPVGSLRKM*APVRLP
Trigger: TGGCAGCCTCACAGGTGCCAACATCTTCCGCAGCGA...GCCGACTGGCTGTTCATCCCCGAGGCTCCACCCGAGGACGGCTGGGAGAACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp TACCGGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGAGACTCCAGCTGGCCCTaGGGCAGGGTCCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: YRPGRARAGPCSEPSMGRDSSWP*GRVLLV
Trigger: GACCAAGAGGACCCTGCCCAAGGGCCAGCTGGAGTC...TCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCCGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp AGCAGGCTGCCCCACTCGCTGCGGAAGATGTTGGCACCTGTGAGGCTGCCATCCTCGGTGCCAGGGACGTaGTTGCTGATGGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SRLPHSLRKMLAPVRLPSSVPGT*LLMVAG
Trigger: CCCAGCCACCATCAGCAACAACGTCCCTGGCACCGA...GGATGGCAGCCTCACAGGTGCCAACATCTTCCGCAGCGAGTGGGGCAGCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp CGCCGGGGCCCCCACATTCAGGATGGCCAGGGAGAAGTTAGACTTCTCCTTGGGGCCTCGGCAGCTCCCTaGAACATGGAGACCCCCACG +
Preference number: 5 (lower is better)
Translates to: RRGPHIQDGQGEVRLLLGASAAP*NMETPT
Trigger: CGTGGGGGTCTCCATGTTCAAGGGAGCTGCCGAGGC...CCCAAGGAGAAGTCTAACTTCTCCCTGGCCATCCTGAATGTGGGGGCCCCGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS TCA 90 bp CTGGCACGCAGGCAACAGAGGAGGCAGAAGGGGCGAGCACTGTTGTaGAGCCAGGCTTGCGGGCGGGAACACAGGTCAGTGCCCACACAA +
Preference number: 5 (lower is better)
Translates to: LARRQQRRQKGRALL*SQACGREHRSVPTQ
Trigger: TTGTGTGGGCACTGACCTGTGTTCCCGCCCGCAAGCCTGGCTTCACAACAGTGCTCGCCCCTTCTGCCTCCTCTGTTGCCTGCGTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS TCA 90 bp GCCAGTGCAGACAGGATCCCCACGGGGAGCCTCCCAGGCAGCTTGTaGACACCCATTCCTTCCAACCCGTGCACCGTTCCCGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: ASADRIPTGSLPGSL*TPIPSNPCTVPVCS
Trigger: GGAACAGACGGGAACGGTGCACGGGTTGGAAGGAATGGGTGTTCACAAGCTGCCTGGGAGGCTCCCCGTGGGGATCCTGTCTGCACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS GCA 90 bp CAGGTTCTGGAAAAAGGGGCCAGGCCCTGCCAGCAGCCTGGACGCTaGCCAGCACACCGCCCAACTGCCCTGGGAATACGGTATCTGTTC +
Preference number: 5 (lower is better)
Translates to: QVLEKGARPCQQPGR*PAHRPTALGIRYLF
Trigger: GAACAGATACCGTATTCCCAGGGCAGTTGGGCGGTGTGCTGGGCAGCGTCCAGGCTGCTGGCAGGGCCTGGCCCCTTTTTCCAGAACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS-3UTR CAA 90 bp CAGCGCCATCACCGCCTCCATGCCCATCTTGCTGCTCAGGATCCGGTCGAAGGCCTGGTGGTAAAGGCCTaGCAGCGAGCGCTGCCAATG +
Preference number: 5 (lower is better)
Translates to: QRHHRLHAHLAAQDPVEGLVVKA*QRALPM
Trigger: CATTGGCAGCGCTCGCTGCAAGGCCTTTACCACCAG...GCCTTCGACCGGATCCTGAGCAGCAAGATGGGCATGGAGGCGGTGATGGCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCGCCTCGTCAAACCTCTaGTCATCCATGGCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGASSNL*SSMAFC
Trigger: GCAGAAAGCCATGGATGACAAGAGGTTTGACGAGGC...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGTAGAGCAAGGGCTGTCGGTGCCAGGGACGTaGTTGCTGATGGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSTQPRRQQPTGQVEQGLSVPGT*LLMVAG
Trigger: CCCAGCCACCATCAGCAACAACGTCCCTGGCACCGA...CAGCCCTTGCTCTACCTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GTGCCAGGGACGTTGTTGCTGATGGTGGCTGGGATGACACACATGACGATGCAGGCTTGTCAGGGGACCTaGCGCGTCGCCGCCGCTGGT +
Preference number: 5 (lower is better)
Translates to: VPGTLLLMVAGMTHMTMQACQGT*RVAAAG
Trigger: ACCAGCGGCGGCGACGCGCAAGGTCCCCTGACAAGC...CTGCATCGTCATGTGTGTCATCCCAGCCACCATCAGCAACAACGTCCCTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS CCA 90 bp AGCCTCCCCACCCTCTCCTGCTTCCGGGACCTCCTGTCCACCCTGTaGCTACAGCCACGTTCCGACACATCTTTCCAGCCTAGAACCCAC +
Preference number: 5 (lower is better)
Translates to: SLPTLSCFRDLLSTL*LQPRSDTSFQPRTH
Trigger: GTGGGTTCTAGGCTGGAAAGATGTGTCGGAACGTGGCTGTAGCCACAGGGTGGACAGGAGGTCCCGGAAGCAGGAGAGGGTGGGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS-3UTR CAA 90 bp CGCCGGGGCCCCCACATTCAGGATGGCCAGGGAGAAGTTAGACTTCTCCTTGGGGAGATGGGCTTCCCGTaGCGGTCAATGGCACCCTCA +
Preference number: 5 (lower is better)
Translates to: RRGPHIQDGQGEVRLLLGEMGFP*RSMAPS
Trigger: TGAGGGTGCCATTGACCGCAACGGGAAGCCCATCTC...CCCAAGGAGAAGTCTAACTTCTCCCTGGCCATCCTGAATGTGGGGGCCCCGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp GCCAGGGGCATCCCCCTCTCAACACAACCTAGGCGCCAGCAGCCTACCGGCCAGGCCTCGTCAAACCTCTaGTCATCCATGGCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: ARGIPLSTQPRRQQPTGQASSNL*SSMAFC
Trigger: GCAGAAAGCCATGGATGACAAGAGGTTTGACGAGGC...CTGGCCGGTAGGCTGCTGGCGCCTAGGTTGTGTTGAGAGGGGGATGCCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGGCCTGGCAGGTCATGTGCTCCACGTaGACCTTTAAGTCGTGGATG +
Preference number: 5 (lower is better)
Translates to: LEGLAGWSQDTSPREAWQVMCST*TFKSWM
Trigger: CATCCACGACTTAAAGGTCAACGTGGAGCACATGAC...CTGCCAGGCCTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCGTCATGTGCTCCACGTaGACCTTTAAGTCGTGGATG +
Preference number: 5 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGVMCST*TFKSWM
Trigger: CATCCACGACTTAAAGGTCAACGTGGAGCACATGAC...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp TGGTCCCATAGTTCCGGTCAAAGGGGGTTGGAGCGCCACCCTGCTGCAGGTGGCCAGTCGAAGACGCCCTaGCCCTCTGATGAGTACAGG +
Preference number: 5 (lower is better)
Translates to: WSHSSGQRGLERHPAAGGQSKTP*PSDEYR
Trigger: CCTGTACTCATCAGAGGGCAAGGGCGTCTTCGACTG...GCCACCTGCAGCAGGGTGGCGCTCCAACCCCCTTTGACCGGAACTATGGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp TGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCCCATCACTTCCAGCACGAACCCAGCTGGATGATGTaGGAGACGCTCAGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: CRYQRQVPAVPAHHFQHEPSWMM*ETLSQL
Trigger: CAACTGGCTGAGCGTCTCCAACATCATCCAGCTGGG...TTCGTGCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGCGCTGGTATCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp GGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGACGCTGCTTTCTGCACTTCCTaGGTCATCTGCACGCACTCC +
Preference number: 5 (lower is better)
Translates to: GQVEQGLAHVVSPAWGDAAFCTS*VICTHS
Trigger: GGAGTGCGTGCAGATGACCAAGGAAGTGCAGAAAGC...AGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACAGCGCCACGTCCCCTGGGCTTTAAGTCGTGGATGTaGAAAGGGTCCTCGAAGACG +
Preference number: 5 (lower is better)
Translates to: PKPGGSSLQTPTAPRPLGFKSWM*KGSSKT
Trigger: CGTCTTCGAGGACCCTTTCAACATCCACGACTTAAA...GCCCAGGGGACGTGGCGCTGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp CTGAGGGCCCATGGGGCGCCAAAGCCAGGGGGCAGCAGCCTCCAAACACCGACATCTGATGAGTACAGGTaGTACAGGAACTCCGTGGTG +
Preference number: 5 (lower is better)
Translates to: LRAHGAPKPGGSSLQTPTSDEYR*YRNSVV
Trigger: CACCACGGAGTTCCTGTACAACCTGTACTCATCAGA...TGTCGGTGTTTGGAGGCTGCTGCCCCCTGGCTTTGGCGCCCCATGGGCCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GTCCTCCTGCTGGAGGGCCTGGCAGGCTGGTCTCAAGACACCAGCCCGAGGGAGAAATCAGTGTCTTTCTaGAGCTCAGTGACGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VLLLEGLAGWSQDTSPREKSVSF*SSVTGL
Trigger: CAGCCCCGTCACTGAGCTCAAGAAAGACACTGATTT...CTCCCTCGGGCTGGTGTCTTGAGACCAGCCTGCCAGGCCCTCCAGCAGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS GCA 90 bp CAGCCAACATTTGTGGGACTCGCTCTGAGCCACAAGCCCCATGTTTaGCCACCACGGGCCACAATGCCTCCTACAGGGACAGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: QPTFVGLALSHKPHV*PPRATMPPTGTGLE
Trigger: CTCCAACCCTGTCCCTGTAGGAGGCATTGTGGCCCGTGGTGGGCAAACATGGGGCTTGTGGCTCAGAGCGAGTCCCACAAATGTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS CCA 90 bp GAGTGCAGGGGTCTGCTGAGGGGGCTTACCCACCACGGAGCTGGGTaGCCTCGTCAAACCTCTTGTCATCCATGGCTTTCTGCACTTCCT +
Preference number: 5 (lower is better)
Translates to: ECRGLLRGLTHHGAG*PRQTSCHPWLSALP
Trigger: AGGAAGTGCAGAAAGCCATGGATGACAAGAGGTTTGACGAGGCCACCCAGCTCCGTGGTGGGTAAGCCCCCTCAGCAGACCCCTGCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS-3UTR CAA 90 bp CGCCGGGGCCCCCACATTCAGGATGGCCAGGGAGAAGTTAGACTTCTCCTTGGGGAGACGCTCAGCCAGTaGGCCTGCTTGATGTTCTCA +
Preference number: 5 (lower is better)
Translates to: RRGPHIQDGQGEVRLLLGETLSQ*ACLMFS
Trigger: TGAGAACATCAAGCAGGCCAACTGGCTGAGCGTCTC...CCCAAGGAGAAGTCTAACTTCTCCCTGGCCATCCTGAATGTGGGGGCCCCGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp TACCGGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGAGCTTTCTGCACTTCCTaGGTCATCTGCACGCACTCC +
Preference number: 5 (lower is better)
Translates to: YRPGRARAGPCSEPSMGRAFCTS*VICTHS
Trigger: GGAGTGCGTGCAGATGACCAAGGAAGTGCAGAAAGC...TCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCCGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GTGCCAGGGACGTTGTTGCTGATGGTGGCTGGGATGACACACATGACGATGCAGTGGCCTCAGAAGCCCTaGTCCATGCTCAGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: VPGTLLLMVAGMTHMTMQWPQKP*SMLRVR
Trigger: CCGCACCCTGAGCATGGACAAGGGCTTCTGAGGCCA...CTGCATCGTCATGTGTGTCATCCCAGCCACCATCAGCAACAACGTCCCTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS TCA 90 bp TGTACAGGAACTCCGTGGTGTAGTAGTCATGGCACTTCTCGTTCCTaGGAGGGGCAGCAGGGCCTGAGTCGGCGGGAACGAGTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: CTGTPWCSSHGTSRS*EGQQGLSRRERVQV
Trigger: GACCTGAACTCGTTCCCGCCGACTCAGGCCCTGCTGCCCCTCTCAGGAACGAGAAGTGCCATGACTACTACACCACGGAGTTCCTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474114.5
ENST00000498841.5
CDS CCA 90 bp GGTGGGCGAGGAGCTTGTAAATGTTCCAGTTGTTCTCGAAGCTCCTaGAAGGGATTCGGGTCACACCATGCACAGCCCTGCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: GGRGACKCSSCSRSS*KGFGSHHAQPCSAT
Trigger: CGTGGCGCTGCAGGGCTGTGCATGGTGTGACCCGAATCCCTTCCAGGAGCTTCGAGAACAACTGGAACATTTACAAGCTCCTCGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460020.5
ENST00000466134.5
ENST00000467315.5
ENST00000474114.5
ENST00000498841.5
CDS CCA 90 bp GTAAGAGTGCAGGGGTCTGCTGAGGGGGCTTACCCACCACGGAGCTaGGTGGCCTCGTCAAACCTCTTGTCATCCATGGCTTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: VRVQGSAEGAYPPRS*VASSNLLSSMAFCT
Trigger: AGTGCAGAAAGCCATGGATGACAAGAGGTTTGACGAGGCCACCCAGCTCCGTGGTGGGTAAGCCCCCTCAGCAGACCCCTGCACTCTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS-3UTR CAA 90 bp TGGAGACCCCCACGAGAGGACTCTCGACCTCTACCCTGGTTACACATGCTTCTCATGAACACACGGCGCTaGGTCCCCGAGGCAGACTGT +
Preference number: 5 (lower is better)
Translates to: WRPPREDSRPLPWLHMLLMNTRR*VPEADC
Trigger: ACAGTCTGCCTCGGGGACCAAGCGCCGTGTGTTCAT...GAGAAGCATGTGTAACCAGGGTAGAGGTCGAGAGTCCTCTCGTGGGGGTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp CAGCGCCATCACCGCCTCCATGCCCATCTTGCTGCTCAGGATCCGGTCGAAGGCAAATCAGTGTCTTTCTaGAGCTCAGTGACGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QRHHRLHAHLAAQDPVEGKSVSF*SSVTGL
Trigger: CAGCCCCGTCACTGAGCTCAAGAAAGACACTGATTT...GCCTTCGACCGGATCCTGAGCAGCAAGATGGGCATGGAGGCGGTGATGGCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp TACCGGCCAGGTAGAGCAAGGGCTGGCCCATGTAGTGAGCCCAGCATGGGGAGATCTGATGAGTACAGGTaGTACAGGAACTCCGTGGTG +
Preference number: 5 (lower is better)
Translates to: YRPGRARAGPCSEPSMGRSDEYR*YRNSVV
Trigger: CACCACGGAGTTCCTGTACAACCTGTACTCATCAGA...TCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTACCTGGCCGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp TGCAGATACCAGCGCCAGGTACCCGCAGTGCCGGCCCATCACTTCCAGCACGAACATACTGATGCGGTATaGTGCCAGCATCTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: CRYQRQVPAVPAHHFQHEHTDAV*CQHLQH
Trigger: ATGCTGAAGATGCTGGCACAATACCGCATCAGTATG...TTCGTGCTGGAAGTGATGGGCCGGCACTGCGGGTACCTGGCGCTGGTATCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTGCCTCCATGCCCATCTaGCTGCTCAGGATCCGGTCG +
Preference number: 5 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGASMPI*LLRIRS
Trigger: CGACCGGATCCTGAGCAGCAAGATGGGCATGGAGGC...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS TCA 90 bp CTGCCCTGGGAATACGGTATCTGTTCTAATTCCAGAAGATTCTGGTaGAGACCAAAAGAGACACGGTGCAAGCCTGGCCCCCTGGCACGC +
Preference number: 5 (lower is better)
Translates to: LPWEYGICSNSRRFW*RPKETRCKPGPLAR
Trigger: GCGTGCCAGGGGGCCAGGCTTGCACCGTGTCTCTTTTGGTCTTCACCAGAATCTTCTGGAATTAGAACAGATACCGTATTCCCAGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS-3UTR CAA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTGTGCCAGGGACGTTGTaGCTGATGGTGGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGVPGTL*LMVAGM
Trigger: CATCCCAGCCACCATCAGCAACAACGTCCCTGGCAC...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS-3UTR CAA 90 bp GCTTCTCCGACAACCACAGCATGGCCTTCACCCCCAGCTTGGTCCCATAGTTCCTTTAAGTCGTGGATGTaGAAAGGGTCCTCGAAGACG +
Preference number: 5 (lower is better)
Translates to: ASPTTTAWPSPPAWSHSSFKSWM*KGSSKT
Trigger: CGTCTTCGAGGACCCTTTCAACATCCACGACTTAAA...GGAACTATGGGACCAAGCTGGGGGTGAAGGCCATGCTGTGGTTGTCGGAGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397961.6
CDS-3UTR CAA 90 bp GGTGATTTTATTTCTAGAAAAGGTGACAGGTGCTGCACGTGGGCAGGAGCAGGTCATACTGATGCGGTATaGTGCCAGCATCTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: GDFISRKGDRCCTWAGAGHTDAV*CQHLQH
Trigger: ATGCTGAAGATGCTGGCACAATACCGCATCAGTATG...ACCTGCTCCTGCCCACGTGCAGCACCTGTCACCTTTTCTAGAAATAAAATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349048.9
ENST00000397961.6
CDS GCA 72 bp ACAGGCCTCGGTCCCCTCACTGGGGAAGGGCACACGTaGCCGAGGGCCTGCCGGGAGTGCCCGTGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: TGLGPLTGEGHT*PRACRECPWVP
Trigger: GGGCACCCACGGGCACTCCCGGCAGGCCCTCGGGCACGTGTGCCCTTCCCCAGTGAGGGGACCGAGGCCTGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474114.5
ENST00000495274.1
ENST00000498841.5
CDS GCA 72 bp CCAGACTCAGGCTGGGCCACGCTGTCTGCCCCGGCCTaGAGCTCCGGCTGTGGCTCAAGGGGCTTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: PDSGWATLSAPA*SSGCGSRGLGA
Trigger: GGCTCCCAAGCCCCTTGAGCCACAGCCGGAGCTGCAGGCCGGGGCAGACAGCGTGGCCCAGCCTGAGTCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS CCA 72 bp CTGGGCCCTGCCCGTGCCACCGCCCAGGGTCTCCTGTaGTACCACACCTCCCAGCCCGCCTCCTGTACCACC +
Preference number: 6 (lower is better)
Translates to: LGPARATAQGLL*YHTSQPASCTT
Trigger: GGTGGTACAGGAGGCGGGCTGGGAGGTGTGGTACCACAGGAGACCCTGGGCGGTGGCACGGGCAGGGCCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS CCA 72 bp GGCAGTCGGCTGCCCCTGGCCAAGTCAAGTGACTCCTaGGCCCTGCATCGGCAGCCAGCGGCCCCACCTCGG +
Preference number: 6 (lower is better)
Translates to: GSRLPLAKSSDS*ALHRQPAAPPR
Trigger: CCGAGGTGGGGCCGCTGGCTGCCGATGCAGGGCCCAGGAGTCACTTGACTTGGCCAGGGGCAGCCGACTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474114.5
ENST00000498841.5
CDS GCA 72 bp CTGGTGAAGCCTTCCAGGCGGGAAGACGCACAGGGCTaGAGCTCCACGGGGCACAGGGCAGAGGGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: LVKPSRREDAQG*SSTGHRAEGPA
Trigger: GGCAGGCCCCTCTGCCCTGTGCCCCGTGGAGCTGCAGCCCTGTGCGTCTTCCCGCCTGGAAGGCTTCACCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS CCA 72 bp AGCCCAGGGTCACAGCCATCTCAGCAGGGGGCCTGGTaGGCTTGTCAGGGGACCTTGCGCGTCGCCGCCGCT +
Preference number: 6 (lower is better)
Translates to: SPGSQPSQQGAW*ACQGTLRVAAA
Trigger: AGCGGCGGCGACGCGCAAGGTCCCCTGACAAGCCCACCAGGCCCCCTGCTGAGATGGCTGTGACCCTGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397961.6
ENST00000496824.5
CDS CCA 72 bp ACGGGGGCCCCTGGCCTTGCCCTGCATGGTCGGGTGTaGGCGAAGGACAGCCTGAATGGCCCGTGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: TGAPGLALHGRV*AKDSLNGPCLW
Trigger: CCAGAGGCACGGGCCATTCAGGCTGTCCTTCGCCCACACCCGACCATGCAGGGCAAGGCCAGGGGCCCCCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS CAA 90 bp GCCCTCGGGGCTGGGCCCAGCACACACACAGCTGGGGCTGGGCCCTaGTGTCTGGTGAAGCCTTCCAGGCGGGAAGACGCACAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: ALGAGPSTHTAGAGP*CLVKPSRREDAQGC
Trigger: GCAGCCCTGTGCGTCTTCCCGCCTGGAAGGCTTCACCAGACACAAGGGCCCAGCCCCAGCTGTGTGTGTGCTGGGCCCAGCCCCGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS TCA 72 bp GGCCACCATAAGGCAGGGAGCATGCGGGGATCTAGGTaGGGGGTTCGGCGGAAGTGGCCGCGGGAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: GHHKAGSMRGSR*GVRRKWPREAW
Trigger: CCAGGCCTCCCGCGGCCACTTCCGCCGAACCCCTCACCTAGATCCCCGCATGCTCCCTGCCTTATGGTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474114.5
ENST00000495274.1
ENST00000498841.5
CDS GCA 72 bp TGTGAAGCCAGGCTTGCGGGCGGGAACACAGGTCAGTaGCCACACAAGGGGCTGGCAGCGGGCGGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: CEARLAGGNTGQ*PHKGLAAGGRV
Trigger: CACCCTCCCGCCCGCTGCCAGCCCCTTGTGTGGGCACTGACCTGTGTTCCCGCCCGCAAGCCTGGCTTCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS CCA 72 bp AGAAGCTGCCTCCCGAGGCCGGCAGTCGGCTGCCCCTaGCCAAGTCAAGTGACTCCTGGGCCCTGCATCGGC +
Preference number: 6 (lower is better)
Translates to: RSCLPRPAVGCP*PSQVTPGPCIG
Trigger: GCCGATGCAGGGCCCAGGAGTCACTTGACTTGGCCAGGGGCAGCCGACTGCCGGCCTCGGGAGGCAGCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474114.5
ENST00000498841.5
CDS GCA 72 bp GAAAAAGGGGCCAGGCCCTGCCAGCAGCCTGGACGCTaGCCAGCACACCGCCCAACTGCCCTGGGAATACGG +
Preference number: 6 (lower is better)
Translates to: EKGARPCQQPGR*PAHRPTALGIR
Trigger: CCGTATTCCCAGGGCAGTTGGGCGGTGTGCTGGGCAGCGTCCAGGCTGCTGGCAGGGCCTGGCCCCTTTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS GCA 72 bp ACAGCTTCTCATCCCCTCGCCATGCCCAGATCCCTGTaGACTGGGCCCTGCCCGTGCCACCGCCCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: TASHPLAMPRSL*TGPCPCHRPGS
Trigger: AGACCCTGGGCGGTGGCACGGGCAGGGCCCAGTGCACAGGGATCTGGGCATGGCGAGGGGATGAGAAGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS CCA 72 bp GAGACCTCACCTAGATACAGGCCTCGGTCCCCTCACTaGGGAAGGGCACACGTGCCCGAGGGCCTGCCGGGA +
Preference number: 6 (lower is better)
Translates to: ETSPRYRPRSPH*GRAHVPEGLPG
Trigger: TCCCGGCAGGCCCTCGGGCACGTGTGCCCTTCCCCAGTGAGGGGACCGAGGCCTGTATCTAGGTGAGGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474114.5
ENST00000495274.1
ENST00000498841.5
CDS CAA 90 bp GCCCGTGCAGCAAAGCACGTGGCCGGCATCCAGCTCAAGGGAGGGTaGGCCACCTTGGTAGCGGGTGGAGGCACGCATGGGAACCCAGAC +
Preference number: 6 (lower is better)
Translates to: ARAAKHVAGIQLKGG*ATLVAGGGTHGNPD
Trigger: GTCTGGGTTCCCATGCGTGCCTCCACCCGCTACCAAGGTGGCCAACCCTCCCTTGAGCTGGATGCCGGCCACGTGCTTTGCTGCACGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS TCA 72 bp GCTGGACGGCACCCACCTCACCCAGCCTCTCACACATaGAGTTCTCCCAGCCGTCCTCGGGTGGAGCCTCGG +
Preference number: 6 (lower is better)
Translates to: AGRHPPHPASHT*SSPSRPRVEPR
Trigger: CCGAGGCTCCACCCGAGGACGGCTGGGAGAACTTCATGTGTGAGAGGCTGGGTGAGGTGGGTGCCGTCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS TCA 72 bp AGCCACGGGGCCAGCGTGAAGAGGCTGCAGAATAACTaGGCCCGTTCCTCCCTCTGTGGGCGCCGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: SHGASVKRLQNN*ARSSLCGRRSL
Trigger: CAGGGAGCGGCGCCCACAGAGGGAGGAACGGGCTCAGTTATTCTGCAGCCTCTTCACGCTGGCCCCGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474114.5
CDS GCA 72 bp ATGGCCCCACTGGGTCCTGGTACGAGCCAGCCCTGCTaGCCACAAAGCCAGTCACGCCCCTGCCAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: MAPLGPGTSQPC*PQSQSRPCQVL
Trigger: CAGAACCTGGCAGGGGCGTGACTGGCTTTGTGGGCAGCAGGGCTGGCTCGTACCAGGACCCAGTGGGGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS GCA 72 bp ACCGCGCATGCCAGGCAGGGCACCTTCCACAGAAGGTaGGAGACCCCCAACACAACACGAGGCCACGCCAGC +
Preference number: 6 (lower is better)
Translates to: TAHARQGTFHRR*ETPNTTRGHAS
Trigger: GCTGGCGTGGCCTCGTGTTGTGTTGGGGGTCTCGCACCTTCTGTGGAAGGTGCCCTGCCTGGCATGCGCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460020.5
ENST00000466134.5
ENST00000467315.5
ENST00000474114.5
ENST00000498841.5
CDS GCA 72 bp GGTCGGGTGTGGGCGAAGGACAGCCTGAATGGCCCGTaGCTCTGGTCCACCATTGAGCCCCACCCCACCAAG +
Preference number: 6 (lower is better)
Translates to: GRVWAKDSLNGP*LWSTIEPHPTK
Trigger: CTTGGTGGGGTGGGGCTCAATGGTGGACCAGAGGCACGGGCCATTCAGGCTGTCCTTCGCCCACACCCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS GCA 72 bp GAGACCCCCAACACAACACGAGGCCACGCCAGCCCGTaGAGCAAAGCACGTGGCCGGCATCCAGCTCAAGGG +
Preference number: 6 (lower is better)
Translates to: ETPNTTRGHASP*SKARGRHPAQG
Trigger: CCCTTGAGCTGGATGCCGGCCACGTGCTTTGCTGCACGGGCTGGCGTGGCCTCGTGTTGTGTTGGGGGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS GCA 72 bp CGGGCTTCCTGCAGGGCCACCATAAGGCAGGGAGCATaGGGGGATCTAGGTGAGGGGTTCGGCGGAAGTGGC +
Preference number: 6 (lower is better)
Translates to: RASCRATIRQGA*GDLGEGFGGSG
Trigger: GCCACTTCCGCCGAACCCCTCACCTAGATCCCCGCATGCTCCCTGCCTTATGGTGGCCCTGCAGGAAGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474114.5
ENST00000495274.1
ENST00000498841.5
CDS CCA 72 bp CAAAGATGTCCATGGAAGGGAGGACCAGACTCAGGCTaGGCCACGCTGTCTGCCCCGGCCTGCAGCTCCGGC +
Preference number: 6 (lower is better)
Translates to: QRCPWKGGPDSG*ATLSAPACSSG
Trigger: GCCGGAGCTGCAGGCCGGGGCAGACAGCGTGGCCCAGCCTGAGTCTGGTCCTCCCTTCCATGGACATCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS CCA 72 bp GCTGCCCACAAAGCCAGTCACGCCCCTGCCAGGTTCTaGGTTCGTGGAGACCAGGTTGCCCCACCACGGAGG +
Preference number: 6 (lower is better)
Translates to: AAHKASHAPARF*VRGDQVAPPRR
Trigger: CCTCCGTGGTGGGGCAACCTGGTCTCCACGAACCCAGAACCTGGCAGGGGCGTGACTGGCTTTGTGGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS CCA 72 bp CGTGTCAGTCCCAAACCCACCCTCTGCCCCCAGGGCTaGTTCCAGTGGTCCTGCCTCAGCCTCAGCGCACAG +
Preference number: 6 (lower is better)
Translates to: RVSPKPTLCPQG*FQWSCLSLSAQ
Trigger: CTGTGCGCTGAGGCTGAGGCAGGACCACTGGAACCAGCCCTGGGGGCAGAGGGTGGGTTTGGGACTGACACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS CCA 72 bp AGGGTTGGCCACCTTGGTAGCGGGTGGAGGCACGCATaGGAACCCAGACGTCCAATCCAGCCTGACCCGGCC +
Preference number: 6 (lower is better)
Translates to: RVGHLGSGWRHA*EPRRPIQPDPA
Trigger: GGCCGGGTCAGGCTGGATTGGACGTCTGGGTTCCCATGCGTGCCTCCACCCGCTACCAAGGTGGCCAACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS CCA 72 bp AACACGAGGCCACGCCAGCCCGTGCAGCAAAGCACGTaGCCGGCATCCAGCTCAAGGGAGGGTTGGCCACCT +
Preference number: 6 (lower is better)
Translates to: NTRPRQPVQQST*PASSSREGWPP
Trigger: AGGTGGCCAACCCTCCCTTGAGCTGGATGCCGGCCACGTGCTTTGCTGCACGGGCTGGCGTGGCCTCGTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS CAA 72 bp GTGGCCGGCATCCAGCTCAAGGGAGGGTTGGCCACCTaGGTAGCGGGTGGAGGCACGCATGGGAACCCAGAC +
Preference number: 6 (lower is better)
Translates to: VAGIQLKGGLAT*VAGGGTHGNPD
Trigger: GTCTGGGTTCCCATGCGTGCCTCCACCCGCTACCAAGGTGGCCAACCCTCCCTTGAGCTGGATGCCGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS CAA 72 bp GCAAAGCACGTGGCCGGCATCCAGCTCAAGGGAGGGTaGGCCACCTTGGTAGCGGGTGGAGGCACGCATGGG +
Preference number: 6 (lower is better)
Translates to: AKHVAGIQLKGG*ATLVAGGGTHG
Trigger: CCCATGCGTGCCTCCACCCGCTACCAAGGTGGCCAACCCTCCCTTGAGCTGGATGCCGGCCACGTGCTTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS CAA 90 bp CATGTTTGCCCACCACGGGCCACAATGCCTCCTACAGGGACAGGGTaGGAGCAGCTCAGACAGGGCCCGGGTGTGGTGGGAGTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: HVCPPRATMPPTGTG*EQLRQGPGVVGVEG
Trigger: GCCCTCCACTCCCACCACACCCGGGCCCTGTCTGAGCTGCTCCAACCCTGTCCCTGTAGGAGGCATTGTGGCCCGTGGTGGGCAAACATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS TCA 72 bp TTGCCCTGCATGGTCGGGTGTGGGCGAAGGACAGCCTaGATGGCCCGTGCCTCTGGTCCACCATTGAGCCCC +
Preference number: 6 (lower is better)
Translates to: LPCMVGCGRRTA*MARASGPPLSP
Trigger: GGGGCTCAATGGTGGACCAGAGGCACGGGCCATTCAGGCTGTCCTTCGCCCACACCCGACCATGCAGGGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS GCA 72 bp CCCTCCACCCACCGTGCTGAGGCTCTGAACCTGGCGTaGACCTGTCACGTGCAGCACATCCCACTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: PSTHRAEALNLA*TCHVQHIPLGS
Trigger: GCTGCCAAGTGGGATGTGCTGCACGTGACAGGTGCACGCCAGGTTCAGAGCCTCAGCACGGTGGGTGGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS GCA 72 bp CTGGGCTTGTATCCACAGCTTCTCATCCCCTCGCCATaGCCAGATCCCTGTGCACTGGGCCCTGCCCGTGCC +
Preference number: 6 (lower is better)
Translates to: LGLYPQLLIPSP*PDPCALGPARA
Trigger: GGCACGGGCAGGGCCCAGTGCACAGGGATCTGGGCATGGCGAGGGGATGAGAAGCTGTGGATACAAGCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS CCA 72 bp TGGTCTCCCCAGCTCCAGGCGGAGTCAATGTGCCACTaGGCGGGTCAGCCCAGGGTCACAGCCATCTCAGCA +
Preference number: 6 (lower is better)
Translates to: WSPQLQAESMCH*AGQPRVTAISA
Trigger: TGCTGAGATGGCTGTGACCCTGGGCTGACCCGCCCAGTGGCACATTGACTCCGCCTGGAGCTGGGGAGACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397961.6
ENST00000496824.5
CDS CCA 72 bp CAAAGCCAGTCACGCCCCTGCCAGGTTCTGGGTTCGTaGAGACCAGGTTGCCCCACCACGGAGGGTAGAGCC +
Preference number: 6 (lower is better)
Translates to: QSQSRPCQVLGS*RPGCPTTEGRA
Trigger: GGCTCTACCCTCCGTGGTGGGGCAACCTGGTCTCCACGAACCCAGAACCTGGCAGGGGCGTGACTGGCTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS CAA 90 bp GCAACAGAGGAGGCAGAAGGGGCGAGCACTGTTGTGAAGCCAGGCTaGCGGGCGGGAACACAGGTCAGTGCCCACACAAGGGGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: ATEEAEGASTVVKPG*RAGTQVSAHTRGWQ
Trigger: CTGCCAGCCCCTTGTGTGGGCACTGACCTGTGTTCCCGCCCGCAAGCCTGGCTTCACAACAGTGCTCGCCCCTTCTGCCTCCTCTGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS CAA 90 bp GCAAAGCACGTGGCCGGCATCCAGCTCAAGGGAGGGTTGGCCACCTaGGTAGCGGGTGGAGGCACGCATGGGAACCCAGACGTCCAATCC +
Preference number: 6 (lower is better)
Translates to: AKHVAGIQLKGGLAT*VAGGGTHGNPDVQS
Trigger: GGATTGGACGTCTGGGTTCCCATGCGTGCCTCCACCCGCTACCAAGGTGGCCAACCCTCCCTTGAGCTGGATGCCGGCCACGTGCTTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS TCA 72 bp GACAGGATCCCCACGGGGAGCCTCCCAGGCAGCTTGTaGACACCCATTCCTTCCAACCCGTGCACCGTTCCC +
Preference number: 6 (lower is better)
Translates to: DRIPTGSLPGSL*TPIPSNPCTVP
Trigger: GGGAACGGTGCACGGGTTGGAAGGAATGGGTGTTCACAAGCTGCCTGGGAGGCTCCCCGTGGGGATCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS CCA 72 bp CCAGCTCAAGGGAGGGTTGGCCACCTTGGTAGCGGGTaGAGGCACGCATGGGAACCCAGACGTCCAATCCAG +
Preference number: 6 (lower is better)
Translates to: PAQGRVGHLGSG*RHAWEPRRPIQ
Trigger: CTGGATTGGACGTCTGGGTTCCCATGCGTGCCTCCACCCGCTACCAAGGTGGCCAACCCTCCCTTGAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS CCA 72 bp CCCCAGCTTGGTCCCATAGTTCCGGTCAAAGGGGGTTaGAGCGCCACCCTGGAAACAGGTGAGGCCCGGTTC +
Preference number: 6 (lower is better)
Translates to: PQLGPIVPVKGG*SATLETGEARF
Trigger: GAACCGGGCCTCACCTGTTTCCAGGGTGGCGCTCCAACCCCCTTTGACCGGAACTATGGGACCAAGCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000466134.5
ENST00000474114.5
ENST00000498841.5
CDS CAA 72 bp GAGGCAGAAGGGGCGAGCACTGTTGTGAAGCCAGGCTaGCGGGCGGGAACACAGGTCAGTGCCCACACAAGG +
Preference number: 6 (lower is better)
Translates to: EAEGASTVVKPG*RAGTQVSAHTR
Trigger: CCTTGTGTGGGCACTGACCTGTGTTCCCGCCCGCAAGCCTGGCTTCACAACAGTGCTCGCCCCTTCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS TCA 72 bp AGGCAACAGAGGAGGCAGAAGGGGCGAGCACTGTTGTaGAGCCAGGCTTGCGGGCGGGAACACAGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: RQQRRQKGRALL*SQACGREHRSV
Trigger: CACTGACCTGTGTTCCCGCCCGCAAGCCTGGCTTCACAACAGTGCTCGCCCCTTCTGCCTCCTCTGTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS GCA 72 bp GCTGCCCCTGCTGCAGGTGGCCCAGGACATTGGTCCTaGAGTCGAAGACGCCCTTGCCCTCTGATGAGTACA +
Preference number: 6 (lower is better)
Translates to: AAPAAGGPGHWS*SRRRPCPLMST
Trigger: TGTACTCATCAGAGGGCAAGGGCGTCTTCGACTGCAGGACCAATGTCCTGGGCCACCTGCAGCAGGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS CAA 72 bp ACCTGGCGTGCACCTGTCACGTGCAGCACATCCCACTaGGCAGCAGCCACACCCAAGGGCTCCATAGCCACA +
Preference number: 6 (lower is better)
Translates to: TWRAPVTCSTSH*AAATPKGSIAT
Trigger: TGTGGCTATGGAGCCCTTGGGTGTGGCTGCTGCCAAGTGGGATGTGCTGCACGTGACAGGTGCACGCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS TCA 72 bp ACTCCGTGGTGTAGTAGTCATGGCACTTCTCGTTCCTaGGAGGGGCAGCAGGGCCTGAGTCGGCGGGAACGA +
Preference number: 6 (lower is better)
Translates to: TPWCSSHGTSRS*EGQQGLSRRER
Trigger: TCGTTCCCGCCGACTCAGGCCCTGCTGCCCCTCTCAGGAACGAGAAGTGCCATGACTACTACACCACGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474114.5
ENST00000498841.5
CDS GCA 72 bp CCCACACCTGCTGCAGGTGGCCCAGGACATTGGTCCTaGAGTCGAAGACGCCCTTGCCCTCTGATGAGTACA +
Preference number: 6 (lower is better)
Translates to: PTPAAGGPGHWS*SRRRPCPLMST
Trigger: TGTACTCATCAGAGGGCAAGGGCGTCTTCGACTGCAGGACCAATGTCCTGGGCCACCTGCAGCAGGTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474114.5
ENST00000495274.1
ENST00000498841.5
CDS CCA 72 bp ACCCTCTCCTGCTTCCGGGACCTCCTGTCCACCCTGTaGCTACAGCCACGTTCCGACACATCTTTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: TLSCFRDLLSTL*LQPRSDTSFQP
Trigger: AGGCTGGAAAGATGTGTCGGAACGTGGCTGTAGCCACAGGGTGGACAGGAGGTCCCGGAAGCAGGAGAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS CAA 90 bp CCAGCCAACATTTGTGGGACTCGCTCTGAGCCACAAGCCCCATGTTaGCCCACCACGGGCCACAATGCCTCCTACAGGGACAGGGTTGGA +
Preference number: 6 (lower is better)
Translates to: PANICGTRSEPQAPC*PTTGHNASYRDRVG
Trigger: TCCAACCCTGTCCCTGTAGGAGGCATTGTGGCCCGTGGTGGGCAAACATGGGGCTTGTGGCTCAGAGCGAGTCCCACAAATGTTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS TCA 72 bp CACCACACACCAGCCGCGGCCCAGCTCTCTGGGAACTaGAAGAGCTTTTCGGCCGTCCACTTCAATGACCCA +
Preference number: 6 (lower is better)
Translates to: HHTPAAAQLSGN*KSFSAVHFNDP
Trigger: TGGGTCATTGAAGTGGACGGCCGAAAAGCTCTTTCAGTTCCCAGAGAGCTGGGCCGCGGCTGGTGTGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS GCA 72 bp TTTGTGGGACTCGCTCTGAGCCACAAGCCCCATGTTTaGCCACCACGGGCCACAATGCCTCCTACAGGGACA +
Preference number: 6 (lower is better)
Translates to: FVGLALSHKPHV*PPRATMPPTGT
Trigger: TGTCCCTGTAGGAGGCATTGTGGCCCGTGGTGGGCAAACATGGGGCTTGTGGCTCAGAGCGAGTCCCACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS CCA 72 bp GGTCTGCTGAGGGGGCTTACCCACCACGGAGCTGGGTaGCCTCGTCAAACCTCTTGTCATCCATGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: GLLRGLTHHGAG*PRQTSCHPWLS
Trigger: AGAAAGCCATGGATGACAAGAGGTTTGACGAGGCCACCCAGCTCCGTGGTGGGTAAGCCCCCTCAGCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466134.5
ENST00000474114.5
CDS CAA 72 bp ATTTGTGGGACTCGCTCTGAGCCACAAGCCCCATGTTaGCCCACCACGGGCCACAATGCCTCCTACAGGGAC +
Preference number: 6 (lower is better)
Translates to: ICGTRSEPQAPC*PTTGHNASYRD
Trigger: GTCCCTGTAGGAGGCATTGTGGCCCGTGGTGGGCAAACATGGGGCTTGTGGCTCAGAGCGAGTCCCACAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS TCA 72 bp GCCCCCAAGGGGCACCTGCAGCTGCTGATGAACCCATaGGTGATAGATGAGTTGGTCAAGGCTGGTCCCAAA +
Preference number: 6 (lower is better)
Translates to: APKGHLQLLMNP*VIDELVKAGPK
Trigger: TTTGGGACCAGCCTTGACCAACTCATCTATCACTCATGGGTTCATCAGCAGCTGCAGGTGCCCCTTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466134.5
CDS CCA 72 bp AGCCTGGACGCTGCCCAGCACACCGCCCAACTGCCCTaGGAATACGGTATCTGTTCTAATTCCAGAAGATTC +
Preference number: 6 (lower is better)
Translates to: SLDAAQHTAQLP*EYGICSNSRRF
Trigger: GAATCTTCTGGAATTAGAACAGATACCGTATTCCCAGGGCAGTTGGGCGGTGTGCTGGGCAGCGTCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460521.5
ENST00000474114.5
CDS CCA 72 bp GGAGCTTGTAAATGTTCCAGTTGTTCTCGAAGCTCCTaGAAGGGATTCGGGTCACACCATGCACAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: GACKCSSCSRSS*KGFGSHHAQPC
Trigger: GCAGGGCTGTGCATGGTGTGACCCGAATCCCTTCCAGGAGCTTCGAGAACAACTGGAACATTTACAAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460020.5
ENST00000466134.5
ENST00000467315.5
ENST00000474114.5
ENST00000498841.5