RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PFKFB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000170525

Ensembl transcript IDs: ENST00000317350.8, ENST00000360521.7, ENST00000379775.9, ENST00000379785.5, ENST00000379789.8, ENST00000414237.5, ENST00000441697.1, ENST00000450232.1, ENST00000461744.5, ENST00000467491.5, ENST00000475881.5, ENST00000477914.5, ENST00000487989.1, ENST00000490474.5, ENST00000536985.6, ENST00000625260.2, ENST00000626882.2, ENST00000640683.1

Found 1058 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTaGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTT +
Preference number: 1 (lower is better)
Translates to: GPTAKGRAPGTHVAF*CPAAEGTQTVPSMV
Trigger: AACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR CCA 90 bp GCAGCCAGCCTGCCCTTGCACATCTTTGGAGGCAGGCCACAGGCCTaGAAGGTGTGTGGACCTGCAGGAGAGCCAGGGTGCGGACCACCC +
Preference number: 1 (lower is better)
Translates to: AASLPLHIFGGRPQA*KVCGPAGEPGCGPP
Trigger: GGGTGGTCCGCACCCTGGCTCTCCTGCAGGTCCACACACCTTCCAGGCCTGTGGCCTGCCTCCAAAGATGTGCAAGGGCAGGCTGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 90 bp GTGTGGACCTGCAGGAGAGCCAGGGTGCGGACCACCCAGCCAACTTaGGTCTCAGCTCAGGGACTTCCTGCAGAAGAGGCCTCAACCCAA +
Preference number: 1 (lower is better)
Translates to: VWTCRRARVRTTQPT*VSAQGLPAEEASTQ
Trigger: TTGGGTTGAGGCCTCTTCTGCAGGAAGTCCCTGAGCTGAGACGCAAGTTGGCTGGGTGGTCCGCACCCTGGCTCTCCTGCAGGTCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 90 bp ACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTT +
Preference number: 1 (lower is better)
Translates to: TDGAKHGSLRPRLPR*STPPSPEEVLRIRF
Trigger: AAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
3UTR GCA 90 bp TGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCA +
Preference number: 1 (lower is better)
Translates to: WNRHVCLSVSWRSQR*SGSLSCFVQAAAWA
Trigger: TGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475881.5
3UTR GCA 90 bp GGTGCGGACCACCCAGCCAACTTGCGTCTCAGCTCAGGGACTTCCTaGAGAAGAGGCCTCAACCCAACACCTGTCCAAGTTCGTTCCCAT +
Preference number: 1 (lower is better)
Translates to: GADHPANLRLSSGTS*RRGLNPTPVQVRSH
Trigger: ATGGGAACGAACTTGGACAGGTGTTGGGTTGAGGCCTCTTCTGCAGGAAGTCCCTGAGCTGAGACGCAAGTTGGCTGGGTGGTCCGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 90 bp TCTCATATTTCGGCAAAATACTTCCCTCTCCCCGTGCAGCCAGCCTaGCCTTGCACATCTTTGGAGGCAGGCCACAGGCCTGGAAGGTGT +
Preference number: 1 (lower is better)
Translates to: SHISAKYFPLPVQPA*PCTSLEAGHRPGRC
Trigger: ACACCTTCCAGGCCTGTGGCCTGCCTCCAAAGATGTGCAAGGGCAGGCTGGCTGCACGGGGAGAGGGAAGTATTTTGCCGAAATATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 90 bp TGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGTTCTCTCCCATTTCCAAAGCCAGTC +
Preference number: 1 (lower is better)
Translates to: WNRHVCLSVSWRSQR*SGSLSCSLPFPKPV
Trigger: GACTGGCTTTGGAAATGGGAGAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414237.5
3UTR TCA 90 bp CTGCAGAAGAGGCCTCAACCCAACACCTGTCCAAGTTCGTTCCCATaGGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAG +
Preference number: 1 (lower is better)
Translates to: LQKRPQPNTCPSSFP*GVFPGQDAPNSHVE
Trigger: CTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGAACGAACTTGGACAGGTGTTGGGTTGAGGCCTCTTCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR CCA 90 bp GTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAATaGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGA +
Preference number: 1 (lower is better)
Translates to: VLPRAEGRTQAKLQK*KWNGTDTSASVFPG
Trigger: TCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR CCA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTCTCCCA +
Preference number: 1 (lower is better)
Translates to: EMEMEWNRHVCLSVS*RSQRCSGSLSCSLP
Trigger: TGGGAGAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414237.5
3UTR CCA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACA +
Preference number: 1 (lower is better)
Translates to: EMEMEWNRHVCLSVS*RSQRCSGSLSCSST
Trigger: TGTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379785.5
3UTR CCA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAG +
Preference number: 1 (lower is better)
Translates to: EMEMEWNRHVCLSVS*RSQRCSGSLSCFVQ
Trigger: CTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475881.5
3UTR CCA 90 bp TCCCATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTaGAGGTTTTACACATTCCTTAACTTTCAGCAACTAGGAGCCTGC +
Preference number: 1 (lower is better)
Translates to: SHEASSQVKMHQTVT*RFYTFLNFQQLGAC
Trigger: GCAGGCTCCTAGTTGCTGAAAGTTAAGGAATGTGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 90 bp CACCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGGTCAAGATaGACCAAACAGTCACGTGGAGGTTTTACACATTCCTTAACTTTC +
Preference number: 1 (lower is better)
Translates to: HLSKFVPMRRLPRSR*TKQSRGGFTHSLTF
Trigger: GAAAGTTAAGGAATGTGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGAACGAACTTGGACAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR TCA 90 bp AGGCAGGAAAGAAAAGTGACCTTTGGCACAAGCTTTGAGACATCCTaGAAAGGGTCATTTGGACAAACTCTGCTGCCGAGTTTCCAAATG +
Preference number: 1 (lower is better)
Translates to: RQERKVTFGTSFETS*KGSFGQTLLPSFQM
Trigger: CATTTGGAAACTCGGCAGCAGAGTTTGTCCAAATGACCCTTTTCAGGATGTCTCAAAGCTTGTGCCAAAGGTCACTTTTCTTTCCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR CCA 90 bp ATCATCCATTGGAGACCTCTGTATTTTACACAACTGACACTGACCTaGGAAATCCCACATAACCACAGCATAAGGGAAGCTTCTCAGAGT +
Preference number: 1 (lower is better)
Translates to: IIHWRPLYFTQLTLT*EIPHNHSIREASQS
Trigger: ACTCTGAGAAGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAGAGGTCTCCAATGGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
3UTR CCA 90 bp TGCATCATTGTAAAGTGGAAGTGTCATAAACTACCCATCATCCATTaGAGACCTCTGTATTTTACACAACTGACACTGACCTGGGAAATC +
Preference number: 1 (lower is better)
Translates to: CIIVKWKCHKLPIIH*RPLYFTQLTLTWEI
Trigger: GATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAGAGGTCTCCAATGGATGATGGGTAGTTTATGACACTTCCACTTTACAATGATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
3UTR GCA 90 bp GAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTaGATCATTGTAAAGTGGAAGTGTCATAAACTACCCATCATCCAT +
Preference number: 1 (lower is better)
Translates to: ELEALFPLLQNAYLS*IIVKWKCHKLPIIH
Trigger: ATGGATGATGGGTAGTTTATGACACTTCCACTTTACAATGATGCAAGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
3UTR CCA 90 bp TTTCCACTTCTACAAAATGCGTATCTCTCTTGCATCATTGTAAAGTaGAAGTGTCATAAACTACCCATCATCCATTGGAGACCTCTGTAT +
Preference number: 1 (lower is better)
Translates to: FPLLQNAYLSCIIVK*KCHKLPIIHWRPLY
Trigger: ATACAGAGGTCTCCAATGGATGATGGGTAGTTTATGACACTTCCACTTTACAATGATGCAAGAGAGATACGCATTTTGTAGAAGTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
3UTR-3UTR CCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCTGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 2 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
3UTR-3UTR CCA 90 bp CAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCTGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 2 (lower is better)
Translates to: QACPSKGCPGSCVGTSGGCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
3UTR-3UTR CCA 90 bp CAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGTCCGGCCCTGGAGCTCCCTaGGAGCAGGAGGCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: QAALEEVAASEALLGPLSGPGAP*EQEAPV
Trigger: AACTGGGGCCTCCTGCTCCCAGGGAGCTCCAGGGCC...GGACAGTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR GCA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTACCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 2 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
3UTR-3UTR GCA 90 bp AACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 2 (lower is better)
Translates to: NKTAQCPQRPPVRTSTHHPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...GTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR-3UTR CCA 90 bp CAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGTCCCGCCAGGGACCCACGTaGCTTTCTGGTGTCCAGCGG +
Preference number: 2 (lower is better)
Translates to: QAALEEVAASEALLGPLSRQGPT*LSGVQR
Trigger: CCGCTGGACACCAGAAAGCCACGTGGGTCCCTGGCG...GGACAGTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR CCA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACCGCCAGGGACCCACGTaGCTTTCTGGTGTCCAGCGG +
Preference number: 2 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHRQGPT*LSGVQR
Trigger: CCGCTGGACACCAGAAAGCCACGTGGGTCCCTGGCG...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR CCA 90 bp GAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 2 (lower is better)
Translates to: EESALLREPFMFCPGSCVAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...CACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
3UTR CAA 90 bp TGTGTGGACCTGCAGGAGAGCCAGGGTGCGGACCACCCAGCCAACTaGCGTCTCAGCTCAGGGACTTCCTGCAGAAGAGGCCTCAACCCA +
Preference number: 2 (lower is better)
Translates to: CVDLQESQGADHPAN*RLSSGTSCRRGLNP
Trigger: TGGGTTGAGGCCTCTTCTGCAGGAAGTCCCTGAGCTGAGACGCAAGTTGGCTGGGTGGTCCGCACCCTGGCTCTCCTGCAGGTCCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR GCA 90 bp AGAAACGAAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 2 (lower is better)
Translates to: RNETKQHSVPSGLLSGPAPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...TGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTTCGTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR-3UTR GCA 90 bp TTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 2 (lower is better)
Translates to: FHVLSRQLRGHLRGQAAGWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...CCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
3UTR-3UTR CCA 90 bp AGCAGTGCAAGCAGCAGCGATGATCGGAGAGATACTTACAGACAGGCTTGCCCTGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: SSASSSDDRRDTYRQACPVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...AGGGCAAGCCTGTCTGTAAGTATCTCTCCGATCATCGCTGCTGCTTGCACTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461744.5
3UTR-3UTR TCA 90 bp TTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 2 (lower is better)
Translates to: FMFCPGSCVGTSGGRQLGAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
3UTR-3UTR GCA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACCCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR GCA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCAGGGGACACAGACGGTaGCAAGCATGGTTCTCTTCG +
Preference number: 2 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPRGHRR*QAWFSS
Trigger: CGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCT...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR-3UTR CCA 90 bp AGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGTGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 2 (lower is better)
Translates to: RSQRCSGSLSCFVQAAAWCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...CCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
3UTR CAA 90 bp TGCCAGGCACAAGGCAGATGCTCCAAGACAGTGTGCAGGCAGCTCTaGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGTCCC +
Preference number: 2 (lower is better)
Translates to: CQAQGRCSKTVCRQL*KKWLRVRPCLGHCP
Trigger: GGGACAGTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACACTGTCTTGGAGCATCTGCCTTGTGCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR GCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCATGGAACCGACACGTCTaGCTCAGTGTTTCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAWNRHV*LSVSWR
Trigger: CCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR CCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR CCA 90 bp AGAAACGAAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACGCCAGGGACCCACGTaGCTTTCTGGTGTCCAGCGG +
Preference number: 2 (lower is better)
Translates to: RNETKQHSVPSGLLSGPARQGPT*LSGVQR
Trigger: CCGCTGGACACCAGAAAGCCACGTGGGTCCCTGGCG...TGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTTCGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR-3UTR GCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTGGAACCGACACGTCTaGCTCAGTGTTTCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSWNRHV*LSVSWR
Trigger: CCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR GCA 90 bp CCCCCAGGGCAAGACACCCCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTCCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: PPGQDTPTSTFLKRRWDSPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...AGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGGGGTGTCTTGCCCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR GCA 90 bp TCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: SASVFPGGVSAAPGAFHVPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...AACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR GCA 90 bp AACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCACCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 2 (lower is better)
Translates to: NQQAETTGPMLSITTKVSPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...TGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR GCA 90 bp AGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 2 (lower is better)
Translates to: SPQDTFCLGRRAGHKLSCWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...GCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR GCA 90 bp TCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACATGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 2 (lower is better)
Translates to: SPEEVLRIRFASGGGQDTWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...TGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR CCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR CCA 90 bp TCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACATGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SPEEVLRIRFASGGGQDTCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...TGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR CCA 90 bp CTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAATGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: LRKKSSGYVLPRAEGRTQCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...TTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR GCA 90 bp CGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTTGGAACCGACACGTCTaGCTCAGTGTTTCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: RKKSSGYVLPRAEGRTQAWNRHV*LSVSWR
Trigger: CCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA...AGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR GCA 90 bp AGAAACGAAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: RNETKQHSVPSGLLSGPAPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...TGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTTCGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR-3UTR GCA 90 bp GCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 2 (lower is better)
Translates to: ASVFPGGVSAAPGAFHVLWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...CAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
3UTR-3UTR TCA 90 bp CCCCCAGGGCAAGACACCCCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTCCAAGTTCGTTCCCATaGGGCGTCTTCCCAGGTCAA +
Preference number: 2 (lower is better)
Translates to: PPGQDTPTSTFLKRRWDSPSSFP*GVFPGQ
Trigger: TTGACCTGGGAAGACGCCTCATGGGAACGAACTTGG...AGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGGGGTGTCTTGCCCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR GCA 90 bp TTCATGTTAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCATGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 2 (lower is better)
Translates to: FMLDRLALAKVVQAAAWAWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...TGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTAACATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
3UTR-3UTR CCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: RGDTIASHERVRSLLCILCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
3UTR-3UTR CCA 90 bp CCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACGAAATGGAAATGGAATaGAACCGACACGTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: PSPEEVLRIRFASGGGQDEMEME*NRHVCL
Trigger: GAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC...GTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR CCA 90 bp GTATCTCCCTCCCTGTCCAGATTCATGTTACCTCTCTCCCTATCTAGGCCCTTCGGCAGGCCACAGGCCTaGAAGGTGTGTGGACCTGCA +
Preference number: 2 (lower is better)
Translates to: VSPSLSRFMLPLSLSRPFGRPQA*KVCGPA
Trigger: TGCAGGTCCACACACCTTCCAGGCCTGTGGCCTGCC...GAAGGGCCTAGATAGGGAGAGAGGTAACATGAATCTGGACAGGGAGGGAGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR TCA 90 bp CCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTCAGGTCACACTTCTGCCACCTCCCAAGGCTTTGTaGAGGTCTCCGAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: PTSTFLKRRWDSQVTLLPPPKAL*RSPRLD
Trigger: GTCCAGCCTCGGAGACCTTCACAAAGCCTTGGGAGG...TGGCAGAAGTGTGACCTGAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR GCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCAAGGGGACACAGACGGTaGCAAGCATGGTTCTCTTCG +
Preference number: 2 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSRGHRR*QAWFSS
Trigger: CGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCT...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR-3UTR GCA 90 bp AATACAACCAAGTTAAGCACAATCATGCACCCGTGCACGTCCACCCCCTACCCACCCGTGCAGCCAGCCTaGCCTTGCACATCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: NTTKLSTIMHPCTSTPYPPVQPA*PCTSLE
Trigger: CTCCAAAGATGTGCAAGGGCAGGCTGGCTGCACGGG...TGGGTAGGGGGTGGACGTGCACGGGTGCATGATTGTGCTTAACTTGGTTGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR TCA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACACCTCCCAAGGCTTTGTaGAGGTCTCCGAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTPPKAL*RSPRLD
Trigger: GTCCAGCCTCGGAGACCTTCACAAAGCCTTGGGAGG...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR GCA 90 bp GGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACACATTCCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: GVFPGQDAPNSHVEVLHIPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...AATGTGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR CCA 90 bp CGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTGAAATGGAAATGGAATaGAACCGACACGTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: RKKSSGYVLPRAEGRTQAEMEME*NRHVCL
Trigger: GAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC...AGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR TCA 90 bp AATACAACCAAGTTAAGCACAATCATGCACCCGTGCACGTCCACCCCCTACCCACCAAGTTCGTTCCCATaGGGCGTCTTCCCAGGTCAA +
Preference number: 2 (lower is better)
Translates to: NTTKLSTIMHPCTSTPYPPSSFP*GVFPGQ
Trigger: TTGACCTGGGAAGACGCCTCATGGGAACGAACTTGG...TGGGTAGGGGGTGGACGTGCACGGGTGCATGATTGTGCTTAACTTGGTTGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR TCA 90 bp AGAGATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 2 (lower is better)
Translates to: RDTYRQACPSKGCPGSCVAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461744.5
3UTR-3UTR GCA 90 bp CCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTCAGGTCACACTTCTGCCAAGGGGACACAGACGGTaGCAAGCATGGTTCTCTTCG +
Preference number: 2 (lower is better)
Translates to: PTSTFLKRRWDSQVTLLPRGHRR*QAWFSS
Trigger: CGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCT...TGGCAGAAGTGTGACCTGAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR CCA 90 bp ATGAGGAGAAACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACACAGCTCTTGAAGAAGTaGCTGCGAGTGAGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: MRRNQQAETTGPMLSITTQLLKK*LRVRPC
Trigger: GCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTG...TGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGTTTCTCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR GCA 90 bp TCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAGGACACAAGCTAAGCTaGAGAAATGGAAATGGAATG +
Preference number: 2 (lower is better)
Translates to: SPEEVLRIRFASGGGQDTGHKLS*RNGNGM
Trigger: CATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCC...TGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
3UTR-3UTR CCA 90 bp CACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCACTCTTCAGACGGTGCCAAGCATaGTTCTCTTCGGCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: HKSVIDAMKGRPGQSPLFRRCQA*FSSAKA
Trigger: AGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCT...GAAGAGTGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR CCA 90 bp AGGAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCGAAGGTCTCCGAGGCTaGACATTCCTAGGAAACCCA +
Preference number: 2 (lower is better)
Translates to: RSLPPLILGFCHQCGLPSEGLRG*TFLGNP
Trigger: TGGGTTTCCTAGGAATGTCCAGCCTCGGAGACCTTC...GCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR CCA 90 bp AAAACTTTGAGAAAATGTGACAGACAGTTCGTAGACAGGCTTGCCCTAGCAAAGGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 2 (lower is better)
Translates to: KTLRKCDRQFVDRLALAKAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...CTTTGCTAGGGCAAGCCTGTCTACGAACTGTCTGTCACATTTTCTCAAAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
3UTR-3UTR GCA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAGGACACAAGCTAAGCTaGAGAAATGGAAATGGAATG +
Preference number: 2 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLGHKLS*RNGNGM
Trigger: CATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCC...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
3UTR-3UTR TCA 90 bp CACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCACTCTTCCAACATCTACGTTCCTaGAGAGAAGGTGGGACTCTC +
Preference number: 2 (lower is better)
Translates to: HKSVIDAMKGRPGQSPLFQHLRS*REGGTL
Trigger: GAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTG...GAAGAGTGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR TCA 90 bp AATACAACCAAGTTAAGCACAATCATGCACCCGTGCACGTCCACCCCCTACCCACTTTGGCACAAGCTTTaGGACATCCTGAAAAGGGTC +
Preference number: 2 (lower is better)
Translates to: NTTKLSTIMHPCTSTPYPLWHKL*DILKRV
Trigger: GACCCTTTTCAGGATGTCTCAAAGCTTGTGCCAAAG...TGGGTAGGGGGTGGACGTGCACGGGTGCATGATTGTGCTTAACTTGGTTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR TCA 90 bp CCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCGTAAGGAGAAAACTTTaGGAAAATGTGACAGACAGT +
Preference number: 2 (lower is better)
Translates to: PQCFLEESALLREPFMFFVRRKL*ENVTDS
Trigger: ACTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTAC...GAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
3UTR-3UTR CCA 90 bp TCTTCCACAGTTAGTAAGGAGAAAACTTTGAGAAAATGTGACAGACAGTTCGTATGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 2 (lower is better)
Translates to: SSTVSKEKTLRKCDRQFVCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...TACGAACTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTACTAACTGTGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000467491.5
3UTR CAA 90 bp TCCGGGAGCCTTTCATGTTCTTCCACAGTTAGTAAGGAGAAAACTTaGAGAAAATGTGACAGACAGTTCGTAGACAGGCTTGCCCTAGCA +
Preference number: 2 (lower is better)
Translates to: SGSLSCSSTVSKEKT*RKCDRQFVDRLALA
Trigger: TGCTAGGGCAAGCCTGTCTACGAACTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTACTAACTGTGGAAGAACATGAAAGGCTCCCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
3UTR-3UTR GCA 90 bp AGCCTTTCATGTTCTTCCACAGTTAGTAAGGAGAAAACTTTGAGAAAATGTGACTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 2 (lower is better)
Translates to: SLSCSSTVSKEKTLRKCDWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...GTCACATTTTCTCAAAGTTTTCTCCTTACTAACTGTGGAAGAACATGAAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
3UTR-3UTR CCA 90 bp GGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTGCATCAGCAGCTCAGGTTAATTaGTCTCTTTCAGCCAGGTAT +
Preference number: 2 (lower is better)
Translates to: GNSKHYFHFYKMRISLASAAQVN*SLSARY
Trigger: ATACCTGGCTGAAAGAGACCAATTAACCTGAGCTGC...TGATGCAAGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
3UTR-3UTR GCA 90 bp ACTGAAAGTGAAAAACAGAATGGTTGTATGGGAACTCGAAGCACTATTTCCACTAATGCGTATCTCTCTTaGATCATTGTAAAGTGGAAG +
Preference number: 2 (lower is better)
Translates to: TESEKQNGCMGTRSTISTNAYLS*IIVKWK
Trigger: CTTCCACTTTACAATGATGCAAGAGAGATACGCATT...AGTGGAAATAGTGCTTCGAGTTCCCATACAACCATTCTGTTTTTCACTTTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
3UTR CCA 72 bp GCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTaGCTTTCTGGTGTCCAGCGGCCGAGGGGACACAGA +
Preference number: 3 (lower is better)
Translates to: APRLKAGRQGPT*LSGVQRPRGHR
Trigger: TCTGTGTCCCCTCGGCCGCTGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR CCA 72 bp GTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATaGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCAC +
Preference number: 3 (lower is better)
Translates to: VQRPRGHRRCQA*FSSAKAPPLLH
Trigger: GTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR CCA 72 bp GCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTaGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCA +
Preference number: 3 (lower is better)
Translates to: AKGRAPGTHVAF*CPAAEGTQTVP
Trigger: TGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR-3UTR CAA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKALMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000475881.5
ENST00000477914.5
ENST00000490474.5
3UTR GCA 72 bp CTTTCTGGTGTCCAGCGGCCGAGGGGACACAGACGGTaGCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCG +
Preference number: 3 (lower is better)
Translates to: LSGVQRPRGHRR*QAWFSSAKAPP
Trigger: CGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAGAAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR-3UTR CAA 90 bp GTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: VSAAPGAFHVLSRQLRGHSSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...GTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475881.5
3UTR-3UTR CAA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSSSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
3UTR-3UTR CAA 90 bp CAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: QNSTVSPAASCQDQHSSPSSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...GGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR-3UTR CAA 90 bp AGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 3 (lower is better)
Translates to: RLALAKVVQAAAWAPPGASGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...TGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
3UTR-3UTR CAA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGCCCTTGCACATCTTaGGAGGCAGGCCACAGGCCT +
Preference number: 3 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHCPCTS*EAGHRP
Trigger: AGGCCTGTGGCCTGCCTCCAAAGATGTGCAAGGGCA...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 72 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGC +
Preference number: 3 (lower is better)
Translates to: PTLSGRSPQDTF*LGRRAGHKLSC
Trigger: GCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
3UTR GCA 72 bp TCGGCAAAATACTTCCCTCTCCCCGTGCAGCCAGCCTaGCCTTGCACATCTTTGGAGGCAGGCCACAGGCCT +
Preference number: 3 (lower is better)
Translates to: SAKYFPLPVQPA*PCTSLEAGHRP
Trigger: AGGCCTGTGGCCTGCCTCCAAAGATGTGCAAGGGCAGGCTGGCTGCACGGGGAGAGGGAAGTATTTTGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 72 bp GTCCACTCTTCCGACCTTCCCAAGGCACCGGCAGAGTaGCAGGCACAAGGCAGATGCTCCAAGACAGTGTGC +
Preference number: 3 (lower is better)
Translates to: VHSSDLPKAPAE*QAQGRCSKTVC
Trigger: GCACACTGTCTTGGAGCATCTGCCTTGTGCCTGGCACTCTGCCGGTGCCTTGGGAAGGTCGGAAGAGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 72 bp AGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGCTTaGCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGC +
Preference number: 3 (lower is better)
Translates to: SAAPGAFHVRQA*PSKGCPGSCVG
Trigger: GCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
3UTR-3UTR CAA 90 bp CAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: QCFLEESALLREPFMFFHSSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...GTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379785.5
3UTR-3UTR CAA 90 bp TTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCCGGGAGATCTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: FRILPPVWSSQLQTCREISSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...GATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR-3UTR CAA 90 bp GAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 3 (lower is better)
Translates to: EESALLREPFMFCPGSCVSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...CACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477914.5
3UTR-3UTR CAA 90 bp CAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: QCFLEESALLREPFMFFHLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...GTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
3UTR-3UTR CAA 90 bp TCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 3 (lower is better)
Translates to: SASVFPGGVSAAPGAFHVSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...AACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
3UTR GCA 72 bp CACCCAGCCAACTTGCGTCTCAGCTCAGGGACTTCCTaGAGAAGAGGCCTCAACCCAACACCTGTCCAAGTT +
Preference number: 3 (lower is better)
Translates to: HPANLRLSSGTS*RRGLNPTPVQV
Trigger: AACTTGGACAGGTGTTGGGTTGAGGCCTCTTCTGCAGGAAGTCCCTGAGCTGAGACGCAAGTTGGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 72 bp AGCAGCGATGATCGGAGAGATACTTACAGACAGGCTTaGCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGC +
Preference number: 3 (lower is better)
Translates to: SSDDRRDTYRQA*PSKGCPGSCVG
Trigger: GCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCTCCGATCATCGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
3UTR CCA 72 bp ATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGT +
Preference number: 3 (lower is better)
Translates to: MEWNRHVCLSVS*RSQRCSGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
3UTR-3UTR CAA 90 bp TGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACAGTAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 3 (lower is better)
Translates to: CFLEESALLREPFMFFHSSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...ACTGTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467491.5
3UTR-3UTR CAA 90 bp ACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATGACCACCCAGCCAACTaGCGTCTCAGCTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: TNRLRRQVPCFPSPQKCHDHPAN*RLSSGT
Trigger: AGTCCCTGAGCTGAGACGCAAGTTGGCTGGGTGGTC...ATGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR CAA 90 bp CACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCACTCTTCTGCCCTTGCACATCTTaGGAGGCAGGCCACAGGCCT +
Preference number: 3 (lower is better)
Translates to: HKSVIDAMKGRPGQSPLFCPCTS*EAGHRP
Trigger: AGGCCTGTGGCCTGCCTCCAAAGATGTGCAAGGGCA...GAAGAGTGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR CAA 90 bp CATCACCACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCATGCCCTTGCACATCTTaGGAGGCAGGCCACAGGCCT +
Preference number: 3 (lower is better)
Translates to: HHHKSVIDAMKGRPGQSPCPCTS*EAGHRP
Trigger: AGGCCTGTGGCCTGCCTCCAAAGATGTGCAAGGGCA...TGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 72 bp GCAACTAGGAGCCTGCCTCCTTTAATTTTAGGATTCTaGCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCC +
Preference number: 3 (lower is better)
Translates to: ATRSLPPLILGF*HQCGLPSSKRA
Trigger: GGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTCCTAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 72 bp ATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTaGCGGGAGATCACAGAAACGAAACAAAACAGCACA +
Preference number: 3 (lower is better)
Translates to: ILPPVWSSQLQT*REITETKQNST
Trigger: TGTGCTGTTTTGTTTCGTTTCTGTGATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
3UTR GCA 72 bp AAGTTCGTTCCCATGAGGCGTCTTCCCAGGTCAAGATaGACCAAACAGTCACGTGGAGGTTTTACACATTCC +
Preference number: 3 (lower is better)
Translates to: KFVPMRRLPRSR*TKQSRGGFTHS
Trigger: GGAATGTGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGAACGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR-3UTR CAA 90 bp CCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCAGTAAGGAGAAAACTTaGAGAAAATGTGACAGACAG +
Preference number: 3 (lower is better)
Translates to: PQCFLEESALLREPFMFFSKEKT*RKCDRQ
Trigger: CTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTACT...GAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
3UTR TCA 72 bp AGAAAAGTGACCTTTGGCACAAGCTTTGAGACATCCTaGAAAGGGTCATTTGGACAAACTCTGCTGCCGAGT +
Preference number: 3 (lower is better)
Translates to: RKVTFGTSFETS*KGSFGQTLLPS
Trigger: ACTCGGCAGCAGAGTTTGTCCAAATGACCCTTTTCAGGATGTCTCAAAGCTTGTGCCAAAGGTCACTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR GCA 72 bp AAAAATACAACCAAGTTAAGCACAATCATGCACCCGTaGACGTCCACCCCCTACCCACATATTCTGATGAGA +
Preference number: 3 (lower is better)
Translates to: KNTTKLSTIMHP*TSTPYPHILMR
Trigger: TCTCATCAGAATATGTGGGTAGGGGGTGGACGTGCACGGGTGCATGATTGTGCTTAACTTGGTTGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR CCA 72 bp GCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTaGAGGTTTTACACATTCCTTAACTTTCAGCAACTA +
Preference number: 3 (lower is better)
Translates to: ASSQVKMHQTVT*RFYTFLNFQQL
Trigger: TAGTTGCTGAAAGTTAAGGAATGTGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR CCA 72 bp TGGAGACCTCTGTATTTTACACAACTGACACTGACCTaGGAAATCCCACATAACCACAGCATAAGGGAAGCT +
Preference number: 3 (lower is better)
Translates to: WRPLYFTQLTLT*EIPHNHSIREA
Trigger: AGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAGAGGTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
3UTR CCA 72 bp GTAAAGTGGAAGTGTCATAAACTACCCATCATCCATTaGAGACCTCTGTATTTTACACAACTGACACTGACC +
Preference number: 3 (lower is better)
Translates to: VKWKCHKLPIIH*RPLYFTQLTLT
Trigger: GGTCAGTGTCAGTTGTGTAAAATACAGAGGTCTCCAATGGATGATGGGTAGTTTATGACACTTCCACTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
3UTR CCA 72 bp AACATTGTACTGAAAGTGAAAAACAGAATGGTTGTATaGGAACTCGAAGCACTATTTCCACTTCTACAAAAT +
Preference number: 3 (lower is better)
Translates to: NIVLKVKNRMVV*ELEALFPLLQN
Trigger: ATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAACCATTCTGTTTTTCACTTTCAGTACAATGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp GAGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGCCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: ESGGGGPTAKGRAPGTHVPAGQA*VAPDAA
Trigger: GGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGG...CACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTCCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCPAGQA*VAPDAA
Trigger: GGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGG...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCGATGCTCGGGCGCAGTaGCAGCCGCGCTCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGDARAQ*QPRSRH
Trigger: GTGGCGAGAGCGCGGCTGTCACTGCGCCCGAGCATC...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTCTCGCCACCAGGCCCTaGTGCTCGCCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKALATRP*CSPPLR
Trigger: CCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAG...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCGGTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGGCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACC...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTCCTCTCCGGCTTGGCTaGGATGCCCCGCGCACCGCC +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCPLRLG*DAPRTA
Trigger: GGCGGTGCGCGGGGCATCCCAGCCAAGCCGGAGAGG...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000475881.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp CTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGCCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: LSCFVQAAAWAPPGAGSWPAGQA*VAPDAA
Trigger: GGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGG...CCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCGGCTTGGCTGGGATaGCCCGCGCACCGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSPAWLG*PAHRRL
Trigger: AAGCCGGCGGTGCGCGGGGCATCCCAGCCAAGCCGG...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360521.7
CDS-3UTR GCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCGCGGGGCTCGACGTGTaGTGCGAGGGTAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGAGLDV*CEGSEA
Trigger: AGCCTCGCTACCCTCGCAGCACACGTCGAGCCCCGC...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTCCGGACCCTCGCCTGTaGGGGGCTCGACGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCPDPRL*GARRVL
Trigger: CAGCACACGTCGAGCCCCGCACAGGCGAGGGTCCGG...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCACCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LREPFMFCPGSCVGTSGGVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR TCA 90 bp CAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCGATGCTCGGGCGCAGTaGCAGCCGCGCTCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: QTVPSMVLFGQGSPAAPPDARAQ*QPRSRH
Trigger: GTGGCGAGAGCGCGGCTGTCACTGCGCCCGAGCATC...GGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp CTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGCCGGCTTGGCTGGGATaGCCCGCGCACCGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LSCFVQAAAWAPPGAGSWPAWLG*PAHRRL
Trigger: AAGCCGGCGGTGCGCGGGGCATCCCAGCCAAGCCGG...CCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp AGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCACTCGCCACCAGGCCCTaGTGCTCGCCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: RLALAKVVQAAAWAPPGALATRP*CSPPLR
Trigger: CCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAG...TGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR GCA 90 bp TTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCCTCGCCACCAGGCCCTaGTGCTCGCCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: FMFCPGSCVGTSGGRQLGLATRP*CSPPLR
Trigger: CCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAG...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTGCGGGGCTCGACGTGTaGTGCGAGGGTAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCAGLDV*CEGSEA
Trigger: AGCCTCGCTACCCTCGCAGCACACGTCGAGCCCCGC...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: QTVPSMVLFGQGSPAAPPPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...GGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCCCTCTCCGGCTTGGCTaGGATGCCCCGCGCACCGCC +
Preference number: 4 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPPLRLG*DAPRTA
Trigger: GGCGGTGCGCGGGGCATCCCAGCCAAGCCGGAGAGG...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360521.7
CDS-3UTR CCA 90 bp CTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGCCTCTCCGGCTTGGCTaGGATGCCCCGCGCACCGCC +
Preference number: 4 (lower is better)
Translates to: LSCFVQAAAWAPPGAGSWPLRLG*DAPRTA
Trigger: GGCGGTGCGCGGGGCATCCCAGCCAAGCCGGAGAGG...CCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CCA 90 bp TTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCGCCTCCTCTCCGGCTTaGCTGGGATGCCCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: FMFCPGSCVGTSGGRQLGASSPA*LGCPAH
Trigger: GTGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGC...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CCA 90 bp GCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCCGAGATCCCGACGCTaGCAGGAGAGCGGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: APGAFHVLSRQLRGHLRGPRSRR*QESGRR
Trigger: TCGGCGGCCGCTCTCCTGCCAGCGTCGGGATCTCGG...CCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGGCAACGAGGGCCTGTaGTCCACGGGCACCCAGATC +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKAGNEGL*STGTQI
Trigger: GATCTGGGTGCCCGTGGACCACAGGCCCTCGTTGCC...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCACTTCTTGCCCCGGCTaGACAGGCCTGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGTSCPG*TGLSRP
Trigger: GGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGT...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CCA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp AGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGGGCAGGCCACAGGCCTaGAAGGTGTGTGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: RVEVGAPRLKAGRQGPTWGRPQA*KVCGPA
Trigger: TGCAGGTCCACACACCTTCCAGGCCTGTGGCCTGCC...CCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACCCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHPAGQA*VAPDAA
Trigger: GGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGG...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGPAGQA*VAPDAA
Trigger: GGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGG...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp GAGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGCCTCCCAAGGCTTTGTaGAGGTCTCCGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ESGGGGPTAKGRAPGTHVPPKAL*RSPRLD
Trigger: GTCCAGCCTCGGAGACCTTCACAAAGCCTTGGGAGG...CACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCACGGCCCTGGAGGTTGTaGTCGTTCTCGCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: DGAKHGSLRPRLPRCSTPRPWRL*SFSPCR
Trigger: CCGGCACGGCGAGAACGAGCACAACCTCCAGGGCCG...TGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCGGCCCTGGAGGTTGTaGTCGTTCTCGCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSRPWRL*SFSPCR
Trigger: CCGGCACGGCGAGAACGAGCACAACCTCCAGGGCCG...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCACTGAGTCGCCCCCGATaGGGCCCTGGAGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPLSRPR*GPGGCA
Trigger: AGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAG...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTCTGAGTCGCCCCCGATaGGGCCCTGGAGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCLSRPR*GPGGCA
Trigger: AGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAG...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCAGCCAGCCTGCCCTTaGACATCTTTGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RVEVGAPRLKAGRQGPTWQPACP*TSLEAG
Trigger: GCCTGCCTCCAAAGATGTGCAAGGGCAGGCTGGCTG...CCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp GAGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGTTGGCCCACAGGATCTaGGCAACGAGGGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: ESGGGGPTAKGRAPGTHVLAHRI*ATRACG
Trigger: ACCACAGGCCCTCGTTGCCCAGATCCTGTGGGCCAA...CACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR CCA 90 bp GAGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGATGGTGCTCTTCAGCTaGCTGGTCCACACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ESGGGGPTAKGRAPGTHVMVLFS*LVHTRR
Trigger: CCTGCGCGTGTGGACCAGCCAGCTGAAGAGCACCAT...CACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp AGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGTGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: RVEVGAPRLKAGRQGPTWCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...CCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCGGCCCTGGAGCTCCCTaGGAGCAGGAGGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSGPGAP*EQEAPV
Trigger: AACTGGGGCCTCCTGCTCCCAGGGAGCTCCAGGGCC...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCGCCACCAGGCCCTGCTaGTCGCCTCCTCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLATRPC*SPPLRL
Trigger: AAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGC...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp TTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGGCCACCAGGCCCTGCTaGTCGCCTCCTCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: FHVLSRQLRGHLRGQAAGATRPC*SPPLRL
Trigger: AAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGC...CCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTCGGAAAGCTCTGGGATaGTCGGGCGCAGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCRKALG*SGAVTA
Trigger: GGCTGTCACTGCGCCCGAGCATCCCAGAGCTTTCCG...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCGGGGCTCGACGTGTaGTGCGAGGGTAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LSCFVQAAAWAPPGAGSWAGLDV*CEGSEA
Trigger: AGCCTCGCTACCCTCGCAGCACACGTCGAGCCCCGC...CCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp GTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCCGGACCCTCGCCTGTaGGGGGCTCGACGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSAAPGAFHVLSRQLRGHPDPRL*GARRVL
Trigger: CAGCACACGTCGAGCCCCGCACAGGCGAGGGTCCGG...GTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGGGCGTTTCCTGCGCTaGCAGGGGAAACGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKAGRFLR*QGKRAL
Trigger: CAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCC...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCGGGCGTTTCCTGCGCTaGCAGGGGAAACGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGGRFLR*QGKRAL
Trigger: CAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCC...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGGGCACCCAGATCTTCTaGACTCGGCTCTGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: RVEVGAPRLKAGRQGPTWGTQIF*TRLCVS
Trigger: ACTGACGCAGAGCCGAGTGCAGAAGATCTGGGTGCC...CCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTCACTGGCAAACTTCTTaGCCCGGCTGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKAHWQTS*PGWTGL
Trigger: CAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTG...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCACCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCAGCAGGAGAGCCAGGGTaGGGACCACCCAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPAGEPG*GPPSQL
Trigger: AAGTTGGCTGGGTGGTCCGCACCCTGGCTCTCCTGC...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp AGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGGGAGCTGCACGGGAATaGGGACAGAGACATCCTCTC +
Preference number: 4 (lower is better)
Translates to: RVEVGAPRLKAGRQGPTWGAARE*GQRHPL
Trigger: GAGAGGATGTCTCTGTCCGCATTCCCGTGCAGCTCC...CCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGCCTCCTCTCCGGCTTaGCTGGGATGCCCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAASSPA*LGCPAH
Trigger: GTGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGC...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR CCA 90 bp GACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCAACTTCTTGCCCCGGCTaGACAGGCCTGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: DGAKHGSLRPRLPRCSTPTSCPG*TGLSRP
Trigger: GGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGT...TGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTTGCTCTTCAGCTGGCTaGTCCACACGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKACSSAG*STRAGP
Trigger: AGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCA...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCATGGTGCTCTTCAGCTaGCTGGTCCACACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGMVLFS*LVHTRR
Trigger: CCTGCGCGTGTGGACCAGCCAGCTGAAGAGCACCAT...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCAAGCGCCTCGGCCGTCTaGATGGTGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPSASAV*MVLFSW
Trigger: CCAGCTGAAGAGCACCATCCAGACGGCCGAGGCGCT...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTAGCGCCTCGGCCGTCTaGATGGTGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCSASAV*MVLFSW
Trigger: CCAGCTGAAGAGCACCATCCAGACGGCCGAGGCGCT...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QNSTVSPAASCQDQHSSPVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...GGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGTCCGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QAALEEVAASEALLGPLSVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...GGACAGTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGAGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp AGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RVEVGAPRLKAGRQGPTWCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...CCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp ACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCACCGCCAGGGACCCACGTaGCTTTCTGGTGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: TVPSMVLFGQGSPAAPPHRQGPT*LSGVQR
Trigger: CCGCTGGACACCAGAAAGCCACGTGGGTCCCTGGCG...GTGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCGGCCCTGGAGCTCCCTaGGAGCAGGAGGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLGPGAP*EQEAPV
Trigger: AACTGGGGCCTCCTGCTCCCAGGGAGCTCCAGGGCC...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp AGAGGCCTCAACCCAACACCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGCCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: RGLNPTPVQVRSHEASSQPAGQA*VAPDAA
Trigger: GGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGG...CTGGGAAGACGCCTCATGGGAACGAACTTGGACAGGTGTTGGGTTGAGGCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCCTCGCCACCAGGCCCTaGTGCTCGCCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSLATRP*CSPPLR
Trigger: CCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAG...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp CAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCCCGGACCCTCGCCTGTaGGGGGCTCGACGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QNSTVSPAASCQDQHSSPPDPRL*GARRVL
Trigger: CAGCACACGTCGAGCCCCGCACAGGCGAGGGTCCGG...GGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACCGGACCCTCGCCTGTaGGGGGCTCGACGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGPDPRL*GARRVL
Trigger: CAGCACACGTCGAGCCCCGCACAGGCGAGGGTCCGG...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp GAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCCGGCCCTGGAGGTTGTaGTCGTTCTCGCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: ESALLREPFMFCPGSCVGRPWRL*SFSPCR
Trigger: CCGGCACGGCGAGAACGAGCACAACCTCCAGGGCCG...GCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKATSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000475881.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCCCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACCCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp ACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCACGCAGGAGAGCCAGGGTaGGGACCACCCAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: TVPSMVLFGQGSPAAPPHAGEPG*GPPSQL
Trigger: AAGTTGGCTGGGTGGTCCGCACCCTGGCTCTCCTGC...GTGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp AGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCGCCAGCCAAAGTGGGTaGAACGGGCGGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SGRGDTDGAKHGSLRPRLASQSG*NGRGGL
Trigger: AAGCCCTCCCCGCCCGTTGCACCCACTTTGGCTGGC...GAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCTTTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPFCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAA...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp TCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCATTTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SGSLSCFVQAAAWAPPGAFCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAA...TGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR GCA 90 bp TCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGCAGTGAGCCGTGACTaGGCCACCGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SGSLSCFVQAAAWAPPGAAVSRD*ATALQP
Trigger: AGGCTGGAGTGCGGTGGCGCAGTCACGGCTCACTGC...TGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475881.5
CDS-3UTR CCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACCGAGATCCCGACGCTaGCAGGAGAGCGGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGPRSRR*QESGRR
Trigger: TCGGCGGCCGCTCTCCTGCCAGCGTCGGGATCTCGG...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR CCA 90 bp GAGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTCCGGACTTTCATaGCTTCCTCATTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: ESGGGGPTAKGRAPGTHVASGLS*LPHCRG
Trigger: GCCCCGACAATGAGGAAGCCATGAAAGTCCGGAAGC...CACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCGCCGGCACAGGTAGATaGTACGCGGCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: QTVPSMVLFGQGSPAAPPAGTGR*YAAARG
Trigger: TCCACGTGCAGCCGCGTACCATCTACCTGTGCCGGC...GGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCGCCGGCACAGGTAGATaGTACGCGGCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSAGTGR*YAAARG
Trigger: TCCACGTGCAGCCGCGTACCATCTACCTGTGCCGGC...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCCCCGATGCGGCCCTaGAGGTTGTGCTCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LVSSGRGDTDGAKHGSLRPPMRP*RLCSFS
Trigger: CGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGG...CCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCCCCCGATGCGGCCCTaGAGGTTGTGCTCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLPPMRP*RLCSFS
Trigger: CGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGG...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp TTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCCCCCGATGCGGCCCTaGAGGTTGTGCTCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FHVLSRQLRGHLRGQAAGPPMRP*RLCSFS
Trigger: CGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGG...CCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTATGGTGCTCTTCAGCTaGCTGGTCCACACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCMVLFS*LVHTRR
Trigger: CCTGCGCGTGTGGACCAGCCAGCTGAAGAGCACCAT...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCATGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LSCFVQAAAWAPPGAGSWAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...CCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR CCA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRKKSSGYVLPRAEGRTQVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...TTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp GAGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGAGACGGTGCCAAGCATaGTTCTCTTCGGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ESGGGGPTAKGRAPGTHVRRCQA*FSSAKA
Trigger: AGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCT...CACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACAGGAAACCCAGAGAGTaGAGGTGGGGGCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: HRRCQAWFSSAKAPPLLHRKPRE*RWGPHG
Trigger: GCCGTGGGGCCCCCACCTCCACTCTCTGGGTTTCCT...GTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp AGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACACCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: SVSWRSQRCSGSLSCSSTPAGQA*VAPDAA
Trigger: GGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGG...TGTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR TCA 90 bp CAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCCAGGGTAGGTGTCCCTaGTCTCCTCGTAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: QACPSKGCPGSCVGTSGGQGRCP*SPRRSA
Trigger: AGCTGACCTACGAGGAGATCAGGGACACCTACCCTG...GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR TCA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCAGGACCTGTCCCTTaGGCTGGGAGGAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSPGPVP*AGRRIS
Trigger: TGAGATCCTCCTCCCAGCTCAAGGGACAGGTCCTGG...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTACTTTTGGCAGCCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCTFGSL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGGCTGCCAAAAGT...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTTTCGGGAACGCCATaGCAGAAAGTCACGCTCGGT +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKAVSGTP*QKVTLG
Trigger: ACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAAC...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGACTCGCCACCAGGCCCTaGTGCTCGCCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRLATRP*CSPPLR
Trigger: CCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAG...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp TTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCGGAAAGCTCTGGGATaGTCGGGCGCAGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: FHVLSRQLRGHLRGQAAGRKALG*SGAVTA
Trigger: GGCTGTCACTGCGCCCGAGCATCCCAGAGCTTTCCG...CCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCGCGGGGCTCGACGTGTaGTGCGAGGGTAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSAGLDV*CEGSEA
Trigger: AGCCTCGCTACCCTCGCAGCACACGTCGAGCCCCGC...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCCGGACCCTCGCCTGTaGGGGGCTCGACGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKPDPRL*GARRVL
Trigger: CAGCACACGTCGAGCCCCGCACAGGCGAGGGTCCGG...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCCTGCCAGGGGAAACGTaGTTTGGGCTAAGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGLPGET*FGLSSG
Trigger: TCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAG...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACCGGCCGGGCGTTTCCTaGGCTGCCAGGGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHRPGVS*AARGNV
Trigger: CACGTTTCCCCTGGCAGCGCAGGAAACGCCCGGCCG...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACGGCCCTGGAGGTTGTaGTCGTTCTCGCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTRPWRL*SFSPCR
Trigger: CCGGCACGGCGAGAACGAGCACAACCTCCAGGGCCG...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CTTTCTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTCGGCCCTGGAGGTTGTaGTCGTTCTCGCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LSGVQRPRGHRRCQAWFSRPWRL*SFSPCR
Trigger: CCGGCACGGCGAGAACGAGCACAACCTCCAGGGCCG...AGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GAGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTCCTCCACGAACTTaGTCAGAGCACTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: ESGGGGPTAKGRAPGTHVAPPRT*SEHWQT
Trigger: AGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGC...CACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGGGTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQGCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACC...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
CDS-3UTR GCA 90 bp GACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCACCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DGAKHGSLRPRLPRCSTPPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...TGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR GCA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCAGCCAGCCTGCCCTTaGACATCTTTGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSQPACP*TSLEAG
Trigger: GCCTGCCTCCAAAGATGTGCAAGGGCAGGCTGGCTG...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCAGGAGAGAGAGAAAACTaGGCGAGCCTGGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPGEREN*ASLELH
Trigger: GTGCAGCTCCAGGCTCGCGCAGTTTTCTCTCTCTCC...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GAGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGTCAAAGAATGAGGCCTaGGAGGGGGACACGAGAAAC +
Preference number: 4 (lower is better)
Translates to: ESGGGGPTAKGRAPGTHVSKNEA*EGDTRN
Trigger: GTTTCTCGTGTCCCCCTCGCAGGCCTCATTCTTTGA...CACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCTTAAAGAGTCCGGGCTaGCCGCAGACGCGTACGTCA +
Preference number: 4 (lower is better)
Translates to: QACPSKGCPGSCVGTSGGLKSPG*PQTRTS
Trigger: TGACGTACGCGTCTGCGGCCAGCCCGGACTCTTTAA...GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTAGGGGAAACGTGCTTTaGGCTAAGTTCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKARGNVL*AKFRTL
Trigger: GAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCT...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp AGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCCCGAGATCCCGACGCTaGCAGGAGAGCGGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: SPQDTFCLGRRAGHKLSCPRSRR*QESGRR
Trigger: TCGGCGGCCGCTCTCCTGCCAGCGTCGGGATCTCGG...GCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR CCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCGCTTCCGGACTTTCATaGCTTCCTCATTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGASGLS*LPHCRG
Trigger: GCCCCGACAATGAGGAAGCCATGAAAGTCCGGAAGC...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCACCCCCGATGCGGCCCTaGAGGTTGTGCTCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAPPMRP*RLCSFS
Trigger: CGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGG...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCTGCTCTTCAGCTGGCTaGTCCACACGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSCSSAG*STRAGP
Trigger: AGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCA...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp AGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCATGCTCTTCAGCTGGCTaGTCCACACGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RLALAKVVQAAAWAPPGACSSAG*STRAGP
Trigger: AGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCA...TGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAAGGAAACCCAGAGAGTaGAGGTGGGGGCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRARKPRE*RWGPHG
Trigger: GCCGTGGGGCCCCCACCTCCACTCTCTGGGTTTCCT...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp AGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGGAAGGTCTCCGAGGCTaGACATTCCTAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: RVEVGAPRLKAGRQGPTWEGLRG*TFLGNP
Trigger: TGGGTTTCCTAGGAATGTCCAGCCTCGGAGACCTTC...CCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGAGACGCCAGCCAAAGTaGGTGCAACGGGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQRRQPK*VQRAGR
Trigger: CCTCCCCGCCCGTTGCACCCACTTTGGCTGGCGTCT...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTCCACGTCAATCACCTTaGTCAGCGACAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKAPRQSP*SATSPC
Trigger: ACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGG...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKAAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000475881.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTGTTTCGGGAACGCCATaGCAGAAAGTCACGCTCGGT +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCVSGTP*QKVTLG
Trigger: ACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAAC...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTAGGCAGGAGGCCAAATaGGCAAGCAGGAAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKARQEAK*ASRKKA
Trigger: TGCTTTCTTCCTGCTTGCTCATTTGGCCTCCTGCCT...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR GCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAACCGGCTTGGCTGGGATaGCCCGCGCACCGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKPAWLG*PAHRRL
Trigger: AAGCCGGCGGTGCGCGGGGCATCCCAGCCAAGCCGG...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR GCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATCCGGCTTGGCTGGGATaGCCCGCGCACCGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHPAWLG*PAHRRL
Trigger: AAGCCGGCGGTGCGCGGGGCATCCCAGCCAAGCCGG...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGCCGGCTTGGCTGGGATaGCCCGCGCACCGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILPAWLG*PAHRRL
Trigger: AAGCCGGCGGTGCGCGGGGCATCCCAGCCAAGCCGG...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGCCGGACCCTCGCCTGTaGGGGGCTCGACGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QCFLEESALLREPFMLDRPDPRL*GARRVL
Trigger: CAGCACACGTCGAGCCCCGCACAGGCGAGGGTCCGG...CCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR GCA 90 bp CAGTTCGTAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACGGCCCTGGAGGTTGTaGTCGTTCTCGCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: QFVDRLALAKVVQAAAWARPWRL*SFSPCR
Trigger: CCGGCACGGCGAGAACGAGCACAACCTCCAGGGCCG...TGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTACGAACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR GCA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACCTGAGTCGCCCCCGATaGGGCCCTGGAGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHLSRPR*GPGGCA
Trigger: AGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAG...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACCTGAGTCGCCCCCGATaGGGCCCTGGAGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHLSRPR*GPGGCA
Trigger: AGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAG...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGRSFRF*SSTNLL
Trigger: GAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCT...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKARSFRF*SSTNLL
Trigger: GAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCT...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCAACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: DGAKHGSLRPRLPRCSTPTSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...TGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR GCA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAGGTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLGCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACC...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
CDS-3UTR GCA 90 bp CAGACAGTTCGTAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: QTVRRQACPSKGCPGSCVGCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACC...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTACGAACTGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR GCA 90 bp AGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCATGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: RLALAKVVQAAAWAPPGAWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...TGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467491.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTTGGAACCGACACGTCTaGCTCAGTGTTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCWNRHV*LSVSWR
Trigger: CCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475881.5
CDS-3UTR GCA 90 bp TCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SASVFPGGVSAAPGAFHVPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...AACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
CDS-3UTR GCA 90 bp CACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACAGTGCTGGGGAAGGATaGCAGGTGTTCCGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: HRRCQAWFSSAKAPPLLHSAGEG*QVFRSP
Trigger: TGGGGAGCGGAACACCTGGCATCCTTCCCCAGCACT...GTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAGCGCGAGCCTGGAGCTaGACGGGAATGCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTARAWS*TGMRTE
Trigger: CTCTGTCCGCATTCCCGTGCAGCTCCAGGCTCGCGC...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCGGCAGAGCCCCTGCTTaGTGGCTGTCACCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLGRAPA*WLSPSF
Trigger: GAAGGAAGGTGACAGCCAGCAAGCAGGGGCTCTGCC...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536985.6
CDS-3UTR CCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATCCTCTCCGGCTTGGCTaGGATGCCCCGCGCACCGCC +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHPLRLG*DAPRTA
Trigger: GGCGGTGCGCGGGGCATCCCAGCCAAGCCGGAGAGG...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACCCGAGATCCCGACGCTaGCAGGAGAGCGGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: QCFLEESALLREPFMFFHPRSRR*QESGRR
Trigger: TCGGCGGCCGCTCTCCTGCCAGCGTCGGGATCTCGG...GTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CCA 90 bp CTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTACCGAGATCCCGACGCTaGCAGGAGAGCGGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: LPQCFLEESALLREPFMLPRSRR*QESGRR
Trigger: TCGGCGGCCGCTCTCCTGCCAGCGTCGGGATCTCGG...TAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CCA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACGGCAACGAGGGCCTGTaGTCCACGGGCACCCAGATC +
Preference number: 4 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHGNEGL*STGTQI
Trigger: GATCTGGGTGCCCGTGGACCACAGGCCCTCGTTGCC...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR CCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACGGCAACGAGGGCCTGTaGTCCACGGGCACCCAGATC +
Preference number: 4 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHGNEGL*STGTQI
Trigger: GATCTGGGTGCCCGTGGACCACAGGCCCTCGTTGCC...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR CCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCAGGAGTTGGTCAGCTTTaGCCCACAGGATCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPGVGQL*PTGSGQ
Trigger: TTGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCC...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR CCA 90 bp GAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCGCCGGCACAGGTAGATaGTACGCGGCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: ESALLREPFMFCPGSCVGAGTGR*YAAARG
Trigger: TCCACGTGCAGCCGCGTACCATCTACCTGTGCCGGC...GCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACCCCCGATGCGGCCCTaGAGGTTGTGCTCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGPPMRP*RLCSFS
Trigger: CGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGG...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGAACTTCTTGCCCCGGCTaGACAGGCCTGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGTSCPG*TGLSRP
Trigger: GGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGT...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCTGCTCTTCAGCTGGCTaGTCCACACGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPCSSAG*STRAGP
Trigger: AGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCA...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp TCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCATGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: SGSLSCFVQAAAWAPPGACEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...TGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR CCA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACACCCACGTGGCTTTCTaGTGTCCAGCGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHTHVAF*CPAAEG
Trigger: CCCCTCGGCCGCTGGACACCAGAAAGCCACGTGGGT...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACCGCCAGGGACCCACGTaGCTTTCTGGTGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHRQGPT*LSGVQR
Trigger: CCGCTGGACACCAGAAAGCCACGTGGGTCCCTGGCG...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCCGCCAGGGACCCACGTaGCTTTCTGGTGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSRQGPT*LSGVQR
Trigger: CCGCTGGACACCAGAAAGCCACGTGGGTCCCTGGCG...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGGGCCCTGGAGCTCCCTaGGAGCAGGAGGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQGPGAP*EQEAPV
Trigger: AACTGGGGCCTCCTGCTCCCAGGGAGCTCCAGGGCC...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAAGATGCTCGGGCGCAGTaGCAGCCGCGCTCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKDARAQ*QPRSRH
Trigger: GTGGCGAGAGCGCGGCTGTCACTGCGCCCGAGCATC...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR TCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTCCACGTCAATCACCTTaGTCAGCGACAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCPRQSP*SATSPC
Trigger: ACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGG...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp CTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCAGGGTAGGTGTCCCTaGTCTCCTCGTAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LVSSGRGDTDGAKHGSLRQGRCP*SPRRSA
Trigger: AGCTGACCTACGAGGAGATCAGGGACACCTACCCTG...CCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp GACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCACCAAGTTCGTTCCCATaGGGCGTCTTCCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: DGAKHGSLRPRLPRCSTPPSSFP*GVFPGQ
Trigger: TTGACCTGGGAAGACGCCTCATGGGAACGAACTTGG...TGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp GAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGCCTGGGGAACAGACTaGGACCCTCTGACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: EESALLREPFMFCPGSCVAWGTD*DPLTSP
Trigger: GGGAGAGGTCAGAGGGTCTCAGTCTGTTCCCCAGGC...CACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475881.5
CDS-3UTR TCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGAGGTTGAGGCTGCAGTaGGCCGTGACTGCGCCACCG +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKRLRLQ*AVTAPP
Trigger: CGGTGGCGCAGTCACGGCTCACTGCAGCCTCAACCT...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475881.5
CDS-3UTR GCA 90 bp CCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCGCCACCAGGCCCTGCTaGTCGCCTCCTCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: PQCFLEESALLREPFMFFATRPC*SPPLRL
Trigger: AAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGC...GAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR GCA 90 bp TCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACTCGCCACCAGGCCCTaGTGCTCGCCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SVFPGGVSAAPGAFHVLPLATRP*CSPPLR
Trigger: CCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAG...TGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR GCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCGCAGCTAAGGCACATTaGTTCCGGACTTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGAAKAH*FRTFMA
Trigger: AGCCATGAAAGTCCGGAAGCAATGTGCCTTAGCTGC...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTACGGCCCTGGAGGTTGTaGTCGTTCTCGCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LPQCFLEESALLREPFMLRPWRL*SFSPCR
Trigger: CCGGCACGGCGAGAACGAGCACAACCTCCAGGGCCG...TAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR GCA 90 bp TCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACACTGAGTCGCCCCCGATaGGGCCCTGGAGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SPEEVLRIRFASGGGQDTLSRPR*GPGGCA
Trigger: AGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAG...TGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGCACTGGCAAACTTCTTaGCCCGGCTGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQHWQTS*PGWTGL
Trigger: CAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTG...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTGCTCCTCCACGAACTTaGTCAGAGCACTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCAPPRT*SEHWQT
Trigger: AGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGC...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLTSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR GCA 90 bp CACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: HRRCQAWFSSAKAPPLLHWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...GTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR GCA 90 bp CCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACCCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSPEEVLRIRFASGGGQDPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...GTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAACCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp GACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCATCCCAGCTCCAAACGTaGCGGGAGATCACAGAAACG +
Preference number: 4 (lower is better)
Translates to: DGAKHGSLRPRLPRCSTPSQLQT*REITET
Trigger: CGTTTCTGTGATCTCCCGGCACGTTTGGAGCTGGGA...TGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGGCCAGCCAAAGTGGGTaGAACGGGCGGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKASQSG*NGRGGL
Trigger: AAGCCCTCCCCGCCCGTTGCACCCACTTTGGCTGGC...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp ACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCGGAGCTGCACGGGAATaGGGACAGAGACATCCTCTC +
Preference number: 4 (lower is better)
Translates to: TDGAKHGSLRPRLPRCSTGAARE*GQRHPL
Trigger: GAGAGGATGTCTCTGTCCGCATTCCCGTGCAGCTCC...GGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCGGAGAGAGAGAAAACTaGGCGAGCCTGGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLGEREN*ASLELH
Trigger: GTGCAGCTCCAGGCTCGCGCAGTTTTCTCTCTCTCC...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCATCAAAGAATGAGGCCTaGGAGGGGGACACGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPSKNEA*EGDTRN
Trigger: GTTTCTCGTGTCCCCCTCGCAGGCCTCATTCTTTGA...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAACCGAGATCCCGACGCTaGCAGGAGAGCGGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKPRSRR*QESGRR
Trigger: TCGGCGGCCGCTCTCCTGCCAGCGTCGGGATCTCGG...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR CCA 90 bp CCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACTTGGCCCACAGGATCTaGGCAACGAGGGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PSPEEVLRIRFASGGGQDLAHRI*ATRACG
Trigger: ACCACAGGCCCTCGTTGCCCAGATCCTGTGGGCCAA...GTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR CCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCATACACGATGCGGCTCTaGATGTGGTCCTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAYTMRL*MWSCTR
Trigger: CCGGGTGCAGGACCACATCCAGAGCCGCATCGTGTA...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAAGCGCCTCGGCCGTCTaGATGGTGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTSASAV*MVLFSW
Trigger: CCAGCTGAAGAGCACCATCCAGACGGCCGAGGCGCT...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp CTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LRKKSSGYVLPRAEGRTQAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...TTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp AGAGATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RDTYRQACPSKGCPGSCVVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR CCA 90 bp CCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTCGGTCTGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PFFASCFGNAMTESHARSVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...AGACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSCFVQAAAWAPPGAGSWCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...CCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR CCA 90 bp CGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTCGCCAGGGACCCACGTaGCTTTCTGGTGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RKKSSGYVLPRAEGRTQARQGPT*LSGVQR
Trigger: CCGCTGGACACCAGAAAGCCACGTGGGTCCCTGGCG...AGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGTCCGGCAGGCCACAGGCCTaGAAGGTGTGTGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: QAALEEVAASEALLGPLSGRPQA*KVCGPA
Trigger: TGCAGGTCCACACACCTTCCAGGCCTGTGGCCTGCC...GGACAGTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCAGCTCTTGAAGAAGTaGCTGCGAGTGAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSQLLKK*LRVRPC
Trigger: GCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTG...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCACAGTGTTGTACTTTTaGCAGCCTCTGACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGTVLYF*QPLTSP
Trigger: GGGAGAGGTCAGAGGCTGCCAAAAGTACAACACTGT...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTACAGTGTTGTACTTTTaGCAGCCTCTGACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKATVLYF*QPLTSP
Trigger: GGGAGAGGTCAGAGGCTGCCAAAAGTACAACACTGT...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp TCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACGATGCTCGGGCGCAGTaGCAGCCGCGCTCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: SHERVRSLLCILFRERHDDARAQ*QPRSRH
Trigger: GTGGCGAGAGCGCGGCTGTCACTGCGCCCGAGCATC...GTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCCCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFPAGQA*VAPDAA
Trigger: GGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGG...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp CAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCTGCAAGCAGCAGCGATaGTCGGAGAGATACTTACAG +
Preference number: 4 (lower is better)
Translates to: QACPSKGCPGSCVGTSGGCKQQR*SERYLQ
Trigger: CTGTAAGTATCTCTCCGATCATCGCTGCTGCTTGCA...GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR TCA 90 bp CTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGTTCGTTCCCATaGGGCGTCTTCCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LVSSGRGDTDGAKHGSLRPSSFP*GVFPGQ
Trigger: TTGACCTGGGAAGACGCCTCATGGGAACGAACTTGG...CCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCTCGATGTTCAAAGAATaGGGCCTGCGAGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPSMFKE*GLRGGH
Trigger: GTGTCCCCCTCGCAGGCCTCATTCTTTGAACATCGA...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp TCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACACGGAAAGCTCTGGGATaGTCGGGCGCAGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: SPEEVLRIRFASGGGQDTRKALG*SGAVTA
Trigger: GGCTGTCACTGCGCCCGAGCATCCCAGAGCTTTCCG...TGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCCTGCCAGGGGAAACGTaGTTTGGGCTAAGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPLPGET*FGLSSG
Trigger: TCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAG...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGAGGGCGTTTCCTGCGCTaGCAGGGGAAACGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGGRFLR*QGKRAL
Trigger: CAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCC...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAACGGCCGGGCGTTTCCTaGGCTGCCAGGGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKRPGVS*AARGNV
Trigger: CACGTTTCCCCTGGCAGCGCAGGAAACGCCCGGCCG...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGCGGCCGGGCGTTTCCTaGGCTGCCAGGGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILRPGVS*AARGNV
Trigger: CACGTTTCCCCTGGCAGCGCAGGAAACGCCCGGCCG...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp TTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCCGGGAGATCCGGCCCTGGAGGTTGTaGTCGTTCTCGCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: FRILPPVWSSQLQTCREIRPWRL*SFSPCR
Trigger: CCGGCACGGCGAGAACGAGCACAACCTCCAGGGCCG...GATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCTGAGTCGCCCCCGATaGGGCCCTGGAGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PQCFLEESALLREPFMFFLSRPR*GPGGCA
Trigger: AGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAG...GAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR GCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCCACTGGCAAACTTCTTaGCCCGGCTGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSHWQTS*PGWTGL
Trigger: CAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTG...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCAGCTCCTCCACGAACTTaGTCAGAGCACTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: DGAKHGSLRPRLPRCSTPAPPRT*SEHWQT
Trigger: AGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGC...TGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp ACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCACAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: TVPSMVLFGQGSPAAPPHRSFRF*SSTNLL
Trigger: GAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCT...GTGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: PSPEEVLRIRFASGGGQDTSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...GTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRATSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQTSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp GAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: ESALLREPFMFCPGSCVGTSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...GCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR GCA 90 bp CTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCGAGGTGGAGGCCACATaGTCCTCAAAGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: LREPFMFCPGSCVGTSGGEVEAT*SSKLLM
Trigger: CATCAACAGCTTTGAGGAGCATGTGGCCTCCACCTC...GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR GCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCACTTACAGACAGGCTTaGCCTAGCAAAGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGTYRQA*PSKGCP
Trigger: TGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGT...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR GCA 90 bp CACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACTGGAACCGACACGTCTaGCTCAGTGTTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HRRCQAWFSSAKAPPLLHWNRHV*LSVSWR
Trigger: CCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA...GTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR GCA 90 bp ACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCTGGAACCGACACGTCTaGCTCAGTGTTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TDGAKHGSLRPRLPRCSTWNRHV*LSVSWR
Trigger: CCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA...GGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR GCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCCCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCAGGGGACACAGACGGTaGCAAGCATGGTTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLRGHRR*QAWFSS
Trigger: CGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCT...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCACTTCCCAGGTCAAGATaGACCAAACAGTCACGTGGA +
Preference number: 4 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPLPRSR*TKQSRG
Trigger: TCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAG...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCCCCGTGCAGCCAGCCTaGCCTTGCACATCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSPVQPA*PCTSLE
Trigger: CTCCAAAGATGTGCAAGGGCAGGCTGGCTGCACGGG...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACCCCGTGCAGCCAGCCTaGCCTTGCACATCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHPVQPA*PCTSLE
Trigger: CTCCAAAGATGTGCAAGGGCAGGCTGGCTGCACGGG...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCAGTGCTGGGGAAGGATaGCAGGTGTTCCGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QNSTVSPAASCQDQHSSPSAGEG*QVFRSP
Trigger: TGGGGAGCGGAACACCTGGCATCCTTCCCCAGCACT...GGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCATGCTCCAAGACAGTGTaGAGGCAGCTCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPCSKTV*RQLLKK
Trigger: CTTCTTCAAGAGCTGCCTGCACACTGTCTTGGAGCA...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CAAGCAGCAGCGATGATCGGAGAGATACTTACAGACAGGCTTGCCCTAGCAAAGCCTCTCCGGCTTGGCTaGGATGCCCCGCGCACCGCC +
Preference number: 4 (lower is better)
Translates to: QAAAMIGEILTDRLALAKPLRLG*DAPRTA
Trigger: GGCGGTGCGCGGGGCATCCCAGCCAAGCCGGAGAGG...CTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCTCCGATCATCGCTGCTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR CCA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAGGCAACGAGGGCCTGTaGTCCACGGGCACCCAGATC +
Preference number: 4 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLGNEGL*STGTQI
Trigger: GATCTGGGTGCCCGTGGACCACAGGCCCTCGTTGCC...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR CCA 90 bp CTTTCTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTTGGCCCACAGGATCTaGGCAACGAGGGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LSGVQRPRGHRRCQAWFSLAHRI*ATRACG
Trigger: ACCACAGGCCCTCGTTGCCCAGATCCTGTGGGCCAA...AGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR CCA 90 bp GAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGTTGGCCCACAGGATCTaGGCAACGAGGGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: EESALLREPFMFCPGSCVLAHRI*ATRACG
Trigger: ACCACAGGCCCTCGTTGCCCAGATCCTGTGGGCCAA...CACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CCA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCGGAGTTGGTCAGCTTTaGCCCACAGGATCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLGVGQL*PTGSGQ
Trigger: TTGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCC...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR CCA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCGCTTCCGGACTTTCATaGCTTCCTCATTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPASGLS*LPHCRG
Trigger: GCCCCGACAATGAGGAAGCCATGAAAGTCCGGAAGC...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGCTTGCCCTTACACGATGCGGCTCTaGATGTGGTCCTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: PGGVSAAPGAFHVRQACPYTMRL*MWSCTR
Trigger: CCGGGTGCAGGACCACATCCAGAGCCGCATCGTGTA...AGGGCAAGCCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CCA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACATACACGATGCGGCTCTaGATGTGGTCCTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTYTMRL*MWSCTR
Trigger: CCGGGTGCAGGACCACATCCAGAGCCGCATCGTGTA...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAGCCGGCACAGGTAGATaGTACGCGGCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRAGTGR*YAAARG
Trigger: TCCACGTGCAGCCGCGTACCATCTACCTGTGCCGGC...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp TGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTACTTCTTGCCCCGGCTaGACAGGCCTGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: CLSVSWRSQRCSGSLSCSTSCPG*TGLSRP
Trigger: GGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGT...AGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CCA 90 bp CCCCCAGGGCAAGACACCCCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTACTTCTTGCCCCGGCTaGACAGGCCTGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: PPGQDTPTSTFLKRRWDSTSCPG*TGLSRP
Trigger: GGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGT...AGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGGGGTGTCTTGCCCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACATGGTGCTCTTCAGCTaGCTGGTCCACACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHMVLFS*LVHTRR
Trigger: CCTGCGCGTGTGGACCAGCCAGCTGAAGAGCACCAT...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp GAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGATGGTGCTCTTCAGCTaGCTGGTCCACACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: EESALLREPFMFCPGSCVMVLFS*LVHTRR
Trigger: CCTGCGCGTGTGGACCAGCCAGCTGAAGAGCACCAT...CACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CCA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAGCGCCTCGGCCGTCTaGATGGTGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRSASAV*MVLFSW
Trigger: CCAGCTGAAGAGCACCATCCAGACGGCCGAGGCGCT...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp CAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGTCCTGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: QAALEEVAASEALLGPLSCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...GGACAGTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGATGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp CCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGCTTGCCCTTGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: PGGVSAAPGAFHVRQACPCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...AGGGCAAGCCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CCA 90 bp AAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: KSSGYVLPRAEGRTQAKLAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...CAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp GAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ESALLREPFMFCPGSCVGCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...GCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR CCA 90 bp ACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCAGACGGTGCCAAGCATaGTTCTCTTCGGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TDGAKHGSLRPRLPRCSTRRCQA*FSSAKA
Trigger: AGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCT...GGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp AACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACACCCACGTGGCTTTCTaGTGTCCAGCGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: NKTAQCPQRPPVRTSTHHTHVAF*CPAAEG
Trigger: CCCCTCGGCCGCTGGACACCAGAAAGCCACGTGGGT...GTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAGCCCTTGCACATCTTTaGAGGCAGGCCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTALAHL*RQATGL
Trigger: CAGGCCTGTGGCCTGCCTCCAAAGATGTGCAAGGGC...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp ACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCACCGGGGAGGGCTTGAATaGTTCAGCATGAAAATCCCC +
Preference number: 4 (lower is better)
Translates to: TVPSMVLFGQGSPAAPPHRGGLE*FSMKIP
Trigger: GGGGATTTTCATGCTGAACCATTCAAGCCCTCCCCG...GTGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp AGAGGCCTCAACCCAACACCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGAGACGCCAGCCAAAGTaGGTGCAACGGGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RGLNPTPVQVRSHEASSQRRQPK*VQRAGR
Trigger: CCTCCCCGCCCGTTGCACCCACTTTGGCTGGCGTCT...CTGGGAAGACGCCTCATGGGAACGAACTTGGACAGGTGTTGGGTTGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp AAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGAGACGCCAGCCAAAGTaGGTGCAACGGGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSSGYVLPRAEGRTQAKLRRQPK*VQRAGR
Trigger: CCTCCCCGCCCGTTGCACCCACTTTGGCTGGCGTCT...CAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCGATGCTCGGGCGCAGTaGCAGCCGCGCTCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: EPASFNFRILPPVWSSQLDARAQ*QPRSRH
Trigger: GTGGCGAGAGCGCGGCTGTCACTGCGCCCGAGCATC...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR TCA 90 bp ACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCACGTCAATCACCTTaGTCAGCGACAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TDGAKHGSLRPRLPRCSTPRQSP*SATSPC
Trigger: ACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGG...GGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCCAGGGTAGGTGTCCCTaGTCTCCTCGTAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSQGRCP*SPRRSA
Trigger: AGCTGACCTACGAGGAGATCAGGGACACCTACCCTG...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAGGGTAGGTGTCCCTaGTCTCCTCGTAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGQGRCP*SPRRSA
Trigger: AGCTGACCTACGAGGAGATCAGGGACACCTACCCTG...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp CAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCCAGGGTAGGTGTCCCTaGTCTCCTCGTAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: QNSTVSPAASCQDQHSSPQGRCP*SPRRSA
Trigger: AGCTGACCTACGAGGAGATCAGGGACACCTACCCTG...GGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp GAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGCAGGGTAGGTGTCCCTaGTCTCCTCGTAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: EESALLREPFMFCPGSCVQGRCP*SPRRSA
Trigger: AGCTGACCTACGAGGAGATCAGGGACACCTACCCTG...CACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR TCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCCTCCCAAGGCTTTGTaGAGGTCTCCGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKPPKAL*RSPRLD
Trigger: GTCCAGCCTCGGAGACCTTCACAAAGCCTTGGGAGG...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp AGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCAACTTTTGGCAGCCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SQRCSGSLSCFVQAAAWATFGSL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGGCTGCCAAAAGT...TGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR TCA 90 bp AGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCCAGACTGAGACCCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SPQDTFCLGRRAGHKLSCQTETL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGGGTCTCAGTCTG...GCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475881.5
CDS-3UTR GCA 90 bp CCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTCGGTCTGCCACCAGGCCCTGCTaGTCGCCTCCTCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: PFFASCFGNAMTESHARSATRPC*SPPLRL
Trigger: AAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGC...AGACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp TCCCATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTGCGGGGCTCGACGTGTaGTGCGAGGGTAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SHEASSQVKMHQTVTWRFAGLDV*CEGSEA
Trigger: AGCCTCGCTACCCTCGCAGCACACGTCGAGCCCCGC...AAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp CTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACCCGGACCCTCGCCTGTaGGGGGCTCGACGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LLRLMSGLGPFFASCFGNPDPRL*GARRVL
Trigger: CAGCACACGTCGAGCCCCGCACAGGCGAGGGTCCGG...GTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACCTGCCAGGGGAAACGTaGTTTGGGCTAAGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: PSPEEVLRIRFASGGGQDLPGET*FGLSSG
Trigger: TCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAG...GTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp AGAGATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGCGGCCGGGCGTTTCCTaGGCTGCCAGGGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: RDTYRQACPSKGCPGSCVRPGVS*AARGNV
Trigger: CACGTTTCCCCTGGCAGCGCAGGAAACGCCCGGCCG...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR GCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACGGCACCCAGATCTTCTaGACTCGGCTCTGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHGTQIF*TRLCVS
Trigger: ACTGACGCAGAGCCGAGTGCAGAAGATCTGGGTGCC...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCTGGCTTCTGCCGAGTTaGAGTCTTTGTAATCCGGGC +
Preference number: 4 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPWLLPS*SLCNPG
Trigger: GCCCGGATTACAAAGACTGCAACTCGGCAGAAGCCA...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp AGAGATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGCGGCCCTGGAGGTTGTaGTCGTTCTCGCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: RDTYRQACPSKGCPGSCVRPWRL*SFSPCR
Trigger: CCGGCACGGCGAGAACGAGCACAACCTCCAGGGCCG...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR GCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSTSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGCCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp TCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACACCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SPEEVLRIRFASGGGQDTPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...TGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp AGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCCCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SPQDTFCLGRRAGHKLSCPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...GCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp GAGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGTTAATTTTAGGATTCTaGCACCAGTGTGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ESGGGGPTAKGRAPGTHVLILGF*HQCGLP
Trigger: GGGAAGACCACACTGGTGGCAGAATCCTAAAATTAA...CACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAACAGCCAGCCTGCCCTTaGACATCTTTGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRKKSSGYVLPRAEGRTQQPACP*TSLEAG
Trigger: GCCTGCCTCCAAAGATGTGCAAGGGCAGGCTGGCTG...TTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGCCCGTGCAGCCAGCCTaGCCTTGCACATCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQPVQPA*PCTSLE
Trigger: CTCCAAAGATGTGCAAGGGCAGGCTGGCTGCACGGG...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAGTGCTGGGGAAGGATaGCAGGTGTTCCGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQSAGEG*QVFRSP
Trigger: TGGGGAGCGGAACACCTGGCATCCTTCCCCAGCACT...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp TTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCCGGGAGATCGCGCGAGCCTGGAGCTaGACGGGAATGCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: FRILPPVWSSQLQTCREIARAWS*TGMRTE
Trigger: CTCTGTCCGCATTCCCGTGCAGCTCCAGGCTCGCGC...GATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCTCAAAGAATGAGGCCTaGGAGGGGGACACGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLSKNEA*EGDTRN
Trigger: GTTTCTCGTGTCCCCCTCGCAGGCCTCATTCTTTGA...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp TTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCCGGGAGATCTTTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: FRILPPVWSSQLQTCREIFCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAA...GATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp AGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCGAGTGGCAGAGCCCCTaGTTGCTGGCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: SPQDTFCLGRRAGHKLSCEWQSP*LLAVTF
Trigger: GAAGGTGACAGCCAGCAAGCAGGGGCTCTGCCACTC...GCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536985.6
CDS-3UTR CCA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTCCTCTCCGGCTTGGCTaGGATGCCCCGCGCACCGCC +
Preference number: 4 (lower is better)
Translates to: EMEMEWNRHVCLSVSWRSPLRLG*DAPRTA
Trigger: GGCGGTGCGCGGGGCATCCCAGCCAAGCCGGAGAGG...ACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR CCA 90 bp CTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCTCCTCTCCGGCTTaGCTGGGATGCCCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: LLRLMSGLGPFFASCFGNASSPA*LGCPAH
Trigger: GTGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGC...GTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp GTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACAGGGGAAACGTGCTTTaGGCTAAGTTCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: VSAAPGAFHVLSRQLRGHRGNVL*AKFRTL
Trigger: GAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCT...GTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CCA 90 bp GACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGCCGAGATCCCGACGCTaGCAGGAGAGCGGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: DTIASHERVRSLLCILFRPRSRR*QESGRR
Trigger: TCGGCGGCCGCTCTCCTGCCAGCGTCGGGATCTCGG...CCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGGGCAACGAGGGCCTGTaGTCCACGGGCACCCAGATC +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILGNEGL*STGTQI
Trigger: GATCTGGGTGCCCGTGGACCACAGGCCCTCGTTGCC...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGCTTCCGGACTTTCATaGCTTCCTCATTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAASGLS*LPHCRG
Trigger: GCCCCGACAATGAGGAAGCCATGAAAGTCCGGAAGC...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTACACGATGCGGCTCTaGATGTGGTCCTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: LPQCFLEESALLREPFMFYTMRL*MWSCTR
Trigger: CCGGGTGCAGGACCACATCCAGAGCCGCATCGTGTA...GAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CCA 90 bp CAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACGCCGGCACAGGTAGATaGTACGCGGCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: QCFLEESALLREPFMFFHAGTGR*YAAARG
Trigger: TCCACGTGCAGCCGCGTACCATCTACCTGTGCCGGC...GTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CCA 90 bp TCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGCCCCCGATGCGGCCCTaGAGGTTGTGCTCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: SVFPGGVSAAPGAFHVRQPPMRP*RLCSFS
Trigger: CGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGG...CTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CCA 90 bp TTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCCGGGAGATCCCCCCGATGCGGCCCTaGAGGTTGTGCTCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FRILPPVWSSQLQTCREIPPMRP*RLCSFS
Trigger: CGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGG...GATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGACTTCTTGCCCCGGCTaGACAGGCCTGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILTSCPG*TGLSRP
Trigger: GGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGT...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTGCTCTTCAGCTGGCTaGTCCACACGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LPQCFLEESALLREPFMFCSSAG*STRAGP
Trigger: AGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCA...GAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CCA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAATGGTGCTCTTCAGCTaGCTGGTCCACACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRMVLFS*LVHTRR
Trigger: CCTGCGCGTGTGGACCAGCCAGCTGAAGAGCACCAT...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGATGGTGCTCTTCAGCTaGCTGGTCCACACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQMVLFS*LVHTRR
Trigger: CCTGCGCGTGTGGACCAGCCAGCTGAAGAGCACCAT...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp AGAGGCCTCAACCCAACACCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGAGCGCCTCGGCCGTCTaGATGGTGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGLNPTPVQVRSHEASSQSASAV*MVLFSW
Trigger: CCAGCTGAAGAGCACCATCCAGACGGCCGAGGCGCT...CTGGGAAGACGCCTCATGGGAACGAACTTGGACAGGTGTTGGGTTGAGGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGTAGGACTCCCCGGTaGGGTAGCGGTAATAGTACT +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAGRTPR*GSGNST
Trigger: AGTACTATTACCGCTACCCCACCGGGGAGTCCTACC...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp AGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACAGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SVSWRSQRCSGSLSCSSTAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...TGTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHAVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCAGAAATGGAAATGGAATaGAACCGACACGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPEMEME*NRHVCL
Trigger: GAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAAGACGGTGCCAAGCATaGTTCTCTTCGGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRARRCQA*FSSAKA
Trigger: AGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCT...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp TTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCCGGGAGATCACCCACGTGGCTTTCTaGTGTCCAGCGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: FRILPPVWSSQLQTCREITHVAF*CPAAEG
Trigger: CCCCTCGGCCGCTGGACACCAGAAAGCCACGTGGGT...GATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp AGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCGAAGGTCTCCGAGGCTaGACATTCCTAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: SGRGDTDGAKHGSLRPRLEGLRG*TFLGNP
Trigger: TGGGTTTCCTAGGAATGTCCAGCCTCGGAGACCTTC...GAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGCAGCTCTTGAAGAAGTaGCTGCGAGTGAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQQLLKK*LRVRPC
Trigger: GCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTG...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAAGAGCCCCTGCTTGCTaGCTGTCACCTTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTRAPAC*LSPSFW
Trigger: CCAGAAGGAAGGTGACAGCCAGCAAGCAGGGGCTCT...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536985.6
CDS-3UTR CCA 90 bp CTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAACAGCTGACAGAGGAGTaGCAGAGCCCCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LRKKSSGYVLPRAEGRTQQLTEE*QSPCLL
Trigger: CAGCAAGCAGGGGCTCTGCCACTCCTCTGTCAGCTG...TTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536985.6
CDS-3UTR TCA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACTTCTTTGCATCCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTLLCIL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGGATGCAAAGAAG...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000536985.6
CDS-3UTR TCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR TCA 90 bp ACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCAACATCTACGTTCCTaGAGAGAAGGTGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: TDGAKHGSLRPRLPRCSTQHLRS*REGGTL
Trigger: GAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTG...GGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp CCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACCTACCCCAGGGTTTaGGGCAATGAGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: PSPEEVLRIRFASGGGQDTYPRV*GNEEKP
Trigger: TGGTTTCTCCTCATTGCCTCAAACCCTGGGGTAGGT...GTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp ACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCACGGCAGGAAAGAAAAGTaGCCTTTGGCACAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: TVPSMVLFGQGSPAAPPHGRKEK*PLAQAL
Trigger: CAAAGCTTGTGCCAAAGGTCACTTTTCTTTCCTGCC...GTGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGATCGATGTTCAAAGAATaGGGCCTGCGAGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGSMFKE*GLRGGH
Trigger: GTGTCCCCCTCGCAGGCCTCATTCTTTGAACATCGA...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACGCCTTTCATGTTCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHAFHVL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGAACATGAAAGGC...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441697.1
ENST00000450232.1
CDS-3UTR TCA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCTCTAAGAGAAAGGTCTaGCTAGTACTAGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGSKRKV*LVLAQC
Trigger: ACACTGTGCTAGTACTAGTCAGACCTTTCTCTTAGA...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR TCA 90 bp AGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCAGTTTCGGGAACGCCATaGCAGAAAGTCACGCTCGGT +
Preference number: 4 (lower is better)
Translates to: SQRCSGSLSCFVQAAAWAVSGTP*QKVTLG
Trigger: ACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAAC...TGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR TCA 90 bp AAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGGGCGGGAGGATCACTTaGACCCAGGAGGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KSSGYVLPRAEGRTQAKLGGRIT*TQEVEA
Trigger: AGCCTCAACCTCCTGGGTTCAAGTGATCCTCCCGCC...CAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475881.5
CDS-3UTR GCA 90 bp GGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACACATTCTCGCCACCAGGCCCTaGTGCTCGCCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GVFPGQDAPNSHVEVLHILATRP*CSPPLR
Trigger: CCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAG...AATGTGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp AAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCGGAAAGCTCTGGGATaGTCGGGCGCAGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: KKSSGYVLPRAEGRTQAKRKALG*SGAVTA
Trigger: GGCTGTCACTGCGCCCGAGCATCCCAGAGCTTTCCG...CTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGCGGAAAGCTCTGGGATaGTCGGGCGCAGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILRKALG*SGAVTA
Trigger: GGCTGTCACTGCGCCCGAGCATCCCAGAGCTTTCCG...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp TCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTGGGCGTTTCCTGCGCTaGCAGGGGAAACGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SASVFPGGVSAAPGAFHVGRFLR*QGKRAL
Trigger: CAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCC...AACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379785.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCGGGCGTTTCCTGCGCTaGCAGGGGAAACGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PQCFLEESALLREPFMFFGRFLR*QGKRAL
Trigger: CAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCC...GAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR GCA 90 bp CCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTCAGGTCACACTTCTGCCACGGCCGGGCGTTTCCTaGGCTGCCAGGGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: PTSTFLKRRWDSQVTLLPRPGVS*AARGNV
Trigger: CACGTTTCCCCTGGCAGCGCAGGAAACGCCCGGCCG...TGGCAGAAGTGTGACCTGAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGATTCTGCACTCGGCTCTaGGTCAGTTCCAACGGCATC +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGFCTRL*VSSNGI
Trigger: GATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAA...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp GGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTTTCTGCACTCGGCTCTaGGTCAGTTCCAACGGCATC +
Preference number: 4 (lower is better)
Translates to: GGVSAAPGAFHVLSRQLRFCTRL*VSSNGI
Trigger: GATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAA...ACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp CCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGCTTGCCCTTTCTGCACTCGGCTCTaGGTCAGTTCCAACGGCATC +
Preference number: 4 (lower is better)
Translates to: PGGVSAAPGAFHVRQACPFCTRL*VSSNGI
Trigger: GATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAA...AGGGCAAGCCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR GCA 90 bp CTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: LVSSGRGDTDGAKHGSLRVVHGF*RVAVFV
Trigger: TACAAAGACTGCAACTCGGCAGAAGCCATGGACGAC...CCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp ACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: TDGAKHGSLRPRLPRCSTVVHGF*RVAVFV
Trigger: TACAAAGACTGCAACTCGGCAGAAGCCATGGACGAC...GGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp AAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCACTGGCAAACTTCTTaGCCCGGCTGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KSSGYVLPRAEGRTQAKLHWQTS*PGWTGL
Trigger: CAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTG...CAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp TCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCACTGGCAAACTTCTTaGCCCGGCTGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SASVFPGGVSAAPGAFHVHWQTS*PGWTGL
Trigger: CAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTG...AACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379785.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGCTCCTCCACGAACTTaGTCAGAGCACTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAAPPRT*SEHWQT
Trigger: AGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGC...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQRSFRF*SSTNLL
Trigger: GAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCT...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGAGGTGGAGGCCACATaGTCCTCAAAGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQEVEAT*SSKLLM
Trigger: CATCAACAGCTTTGAGGAGCATGTGGCCTCCACCTC...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp CAGAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGGTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: QKWKWNGTDTSASVFPGGGCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACC...TCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
CDS-3UTR GCA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFGCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACC...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTCCAAGGCTCCCCCGCTaGTCCACCCCACCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: EMEMEWNRHVCLSVSWRSPRLPR*STPPSP
Trigger: CGGAGAGGGTGGGGTGGAGCAGCGGGGGAGCCTTGG...ACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
CDS-3UTR GCA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAAGGGGACACAGACGGTaGCAAGCATGGTTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTRGHRR*QAWFSS
Trigger: CGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCT...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAGCTCAGGGACTTCCTaGAGAAGAGGCCTCAACCCA +
Preference number: 4 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHSSGTS*RRGLNP
Trigger: TGGGTTGAGGCCTCTTCTGCAGGAAGTCCCTGAGCT...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCTGCTCCAAGACAGTGTaGAGGCAGCTCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPCSKTV*RQLLKK
Trigger: CTTCTTCAAGAGCTGCCTGCACACTGTCTTGGAGCA...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAGGCACAAGGCAGATaGTCCAAGACAGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGQAQGR*SKTVCR
Trigger: CCTGCACACTGTCTTGGAGCATCTGCCTTGTGCCTG...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGACAATCATGCACCCGTaGACGTCCACCCCCTACCCA +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQTIMHP*TSTPYP
Trigger: TGGGTAGGGGGTGGACGTGCACGGGTGCATGATTGT...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp TCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACATTAAAGAGTCCGGGCTaGCCGCAGACGCGTACGTCA +
Preference number: 4 (lower is better)
Translates to: SPEEVLRIRFASGGGQDTLKSPG*PQTRTS
Trigger: TGACGTACGCGTCTGCGGCCAGCCCGGACTCTTTAA...TGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379785.5
CDS-3UTR CCA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGCCTCCTCTCCGGCTTaGCTGGGATGCCCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFASSPA*LGCPAH
Trigger: GTGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGC...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTGCCTCCTCTCCGGCTTaGCTGGGATGCCCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHAASSPA*LGCPAH
Trigger: GTGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGC...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp AACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACTACACGATGCGGCTCTaGATGTGGTCCTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: NKTAQCPQRPPVRTSTHHYTMRL*MWSCTR
Trigger: CCGGGTGCAGGACCACATCCAGAGCCGCATCGTGTA...GTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp TTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCCGGGAGATCGCCGGCACAGGTAGATaGTACGCGGCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: FRILPPVWSSQLQTCREIAGTGR*YAAARG
Trigger: TCCACGTGCAGCCGCGTACCATCTACCTGTGCCGGC...GATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTCGGTCTCCCCCGATGCGGCCCTaGAGGTTGTGCTCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PFFASCFGNAMTESHARSPPMRP*RLCSFS
Trigger: CGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGG...AGACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp TCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACACTTCTTGCCCCGGCTaGACAGGCCTGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SHERVRSLLCILFRERHDTSCPG*TGLSRP
Trigger: GGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGT...GTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp AACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACTGCTCTTCAGCTGGCTaGTCCACACGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: NKTAQCPQRPPVRTSTHHCSSAG*STRAGP
Trigger: AGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCA...GTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CCCCCAGGGCAAGACACCCCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTATGGTGCTCTTCAGCTaGCTGGTCCACACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPGQDTPTSTFLKRRWDSMVLFS*LVHTRR
Trigger: CCTGCGCGTGTGGACCAGCCAGCTGAAGAGCACCAT...AGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGGGGTGTCTTGCCCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCAAGCGCCTCGGCCGTCTaGATGGTGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSSASAV*MVLFSW
Trigger: CCAGCTGAAGAGCACCATCCAGACGGCCGAGGCGCT...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp TCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCAAGCGCCTCGGCCGTCTaGATGGTGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVFPGGVSAAPGAFHVLPSASAV*MVLFSW
Trigger: CCAGCTGAAGAGCACCATCCAGACGGCCGAGGCGCT...TGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATAGCGCCTCGGCCGTCTaGATGGTGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHSASAV*MVLFSW
Trigger: CCAGCTGAAGAGCACCATCCAGACGGCCGAGGCGCT...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGAGCGCCTCGGCCGTCTaGATGGTGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILSASAV*MVLFSW
Trigger: CCAGCTGAAGAGCACCATCCAGACGGCCGAGGCGCT...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp TCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGAGCGCCTCGGCCGTCTaGATGGTGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVFPGGVSAAPGAFHVRQSASAV*MVLFSW
Trigger: CCAGCTGAAGAGCACCATCCAGACGGCCGAGGCGCT...CTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CCA 90 bp TCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: SASVFPGGVSAAPGAFHVCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...AACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379785.5
ENST00000414237.5
ENST00000467491.5
ENST00000475881.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp AGCAGTGCAAGCAGCAGCGATGATCGGAGAGATACTTACAGACAGGCTTGCCCTGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SSASSSDDRRDTYRQACPAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...AGGGCAAGCCTGTCTGTAAGTATCTCTCCGATCATCGCTGCTGCTTGCACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR CCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp CGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RKKSSGYVLPRAEGRTQACLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...AGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp GACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCAGAAATGGAAATGGAATaGAACCGACACGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DGAKHGSLRPRLPRCSTPEMEME*NRHVCL
Trigger: GAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC...TGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAGACGGTGCCAAGCATaGTTCTCTTCGGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHRRCQA*FSSAKA
Trigger: AGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCT...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp CCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAAGGAAACCCAGAGAGTaGAGGTGGGGGCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: PVQVRSHEASSQVKMHQTRKPRE*RWGPHG
Trigger: GCCGTGGGGCCCCCACCTCCACTCTCTGGGTTTCCT...TGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGAACGAACTTGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACCAGCTCTTGAAGAAGTaGCTGCGAGTGAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHQLLKK*LRVRPC
Trigger: GCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTG...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGGAGTTGGTCAGCTTTaGCCCACAGGCTTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQGVGQL*PTGFPE
Trigger: TTCAGGAAAGCCTGTGGGCCAAAGCTGACCAACTCC...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379789.8
CDS-3UTR TCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACCACGTCAATCACCTTaGTCAGCGACAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGPRQSP*SATSPC
Trigger: ACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGG...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp CAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCCCACGTCAATCACCTTaGTCAGCGACAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: QNSTVSPAASCQDQHSSPPRQSP*SATSPC
Trigger: ACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGG...GGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp AACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCAGGGTAGGTGTCCCTaGTCTCCTCGTAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: NKTAQCPQRPPVRTSTHHQGRCP*SPRRSA
Trigger: AGCTGACCTACGAGGAGATCAGGGACACCTACCCTG...GTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTTCTTTGCATCCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKLLCIL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGGATGCAAAGAAG...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000536985.6
CDS-3UTR TCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCTCCCAAGGCTTTGTaGAGGTCTCCGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSPPKAL*RSPRLD
Trigger: GTCCAGCCTCGGAGACCTTCACAAAGCCTTGGGAGG...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp AGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCTTTGGCACAAGCTTTaGGACATCCTGAAAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SGRGDTDGAKHGSLRPRLLWHKL*DILKRV
Trigger: GACCCTTTTCAGGATGTCTCAAAGCTTGTGCCAAAG...GAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCAGGACCTGTCCCTTaGGCTGGGAGGAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSPGPVP*AGRRIS
Trigger: TGAGATCCTCCTCCCAGCTCAAGGGACAGGTCCTGG...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTAACTTTGAGAAAATGTaGCAGACAGTTCGTAGACAG +
Preference number: 4 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKANFEKM*QTVRRQ
Trigger: CTGTCTACGAACTGTCTGTCACATTTTCTCAAAGTT...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR TCA 90 bp CTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAACTTTTGGCAGCCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LPQCFLEESALLREPFMLTFGSL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGGCTGCCAAAAGT...TAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR GCA 90 bp CAGAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGCCACCAGGCCCTGCTaGTCGCCTCCTCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: QKWKWNGTDTSASVFPGGATRPC*SPPLRL
Trigger: AAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGC...TCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR GCA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGCCACCAGGCCCTGCTaGTCGCCTCCTCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFATRPC*SPPLRL
Trigger: AAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGC...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AGAGATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGCGGAAAGCTCTGGGATaGTCGGGCGCAGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: RDTYRQACPSKGCPGSCVRKALG*SGAVTA
Trigger: GGCTGTCACTGCGCCCGAGCATCCCAGAGCTTTCCG...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR GCA 90 bp CAGAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGCGGGGCTCGACGTGTaGTGCGAGGGTAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: QKWKWNGTDTSASVFPGGAGLDV*CEGSEA
Trigger: AGCCTCGCTACCCTCGCAGCACACGTCGAGCCCCGC...TCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR GCA 90 bp AAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGGGGCGTTTCCTGCGCTaGCAGGGGAAACGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: KKSSGYVLPRAEGRTQAKGRFLR*QGKRAL
Trigger: CAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCC...CTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTCGGCCGGGCGTTTCCTaGGCTGCCAGGGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHARPGVS*AARGNV
Trigger: CACGTTTCCCCTGGCAGCGCAGGAAACGCCCGGCCG...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCTTCTGCACTCGGCTCTaGGTCAGTTCCAACGGCATC +
Preference number: 4 (lower is better)
Translates to: SPQDTFCLGRRAGHKLSCFCTRL*VSSNGI
Trigger: GATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAA...GCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR GCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGCAGCTAAGGCACATTaGTTCCGGACTTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQAAKAH*FRTFMA
Trigger: AGCCATGAAAGTCCGGAAGCAATGTGCCTTAGCTGC...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTTGGCTTCTGCCGAGTTaGAGTCTTTGTAATCCGGGC +
Preference number: 4 (lower is better)
Translates to: GGVSAAPGAFHVLSRQLRWLLPS*SLCNPG
Trigger: GCCCGGATTACAAAGACTGCAACTCGGCAGAAGCCA...ACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp CTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCACTGGCAAACTTCTTaGCCCGGCTGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSVSWRSQRCSGSLSCFVHWQTS*PGWTGL
Trigger: CAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTG...GACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAACACTGGCAAACTTCTTaGCCCGGCTGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKHWQTS*PGWTGL
Trigger: CAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTG...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: QNSTVSPAASCQDQHSSPRSFRF*SSTNLL
Trigger: GAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCT...GGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CCCCCAGGGCAAGACACCCCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: PPGQDTPTSTFLKRRWDSTSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...AGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGGGGTGTCTTGCCCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp AAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: KSSGYVLPRAEGRTQAKLTSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...CAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp TGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: CLSVSWRSQRCSGSLSCSWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...AGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379785.5
ENST00000414237.5
ENST00000467491.5
CDS-3UTR GCA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTATGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGTGGAACCGACACGTCTaGCTCAGTGTTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQWNRHV*LSVSWR
Trigger: CCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGATGGAACCGACACGTCTaGCTCAGTGTTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRWNRHV*LSVSWR
Trigger: CCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp AAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KKSSGYVLPRAEGRTQAKPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...CTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp TTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCCGGGAGATCCCTCAGGATACGTTTTaGCTCGGGCGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FRILPPVWSSQLQTCREIPQDTF*LGRRAG
Trigger: TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG...GATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAGGGGACACAGACGGTaGCAAGCATGGTTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRRGHRR*QAWFSS
Trigger: CGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCT...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGAGCTCAGGGACTTCCTaGAGAAGAGGCCTCAACCCA +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKSSGTS*RRGLNP
Trigger: TGGGTTGAGGCCTCTTCTGCAGGAAGTCCCTGAGCT...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAACAGGCACAAGGCAGATaGTCCAAGACAGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRKKSSGYVLPRAEGRTQQAQGR*SKTVCR
Trigger: CCTGCACACTGTCTTGGAGCATCTGCCTTGTGCCTG...TTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp AGGAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCGCCAGCCAAAGTGGGTaGAACGGGCGGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RSLPPLILGFCHQCGLPSASQSG*NGRGGL
Trigger: AAGCCCTCCCCGCCCGTTGCACCCACTTTGGCTGGC...GCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTCAGGTCACACTTCTGCCAGCGCGAGCCTGGAGCTaGACGGGAATGCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PTSTFLKRRWDSQVTLLPARAWS*TGMRTE
Trigger: CTCTGTCCGCATTCCCGTGCAGCTCCAGGCTCGCGC...TGGCAGAAGTGTGACCTGAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp AGAGGCCTCAACCCAACACCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGGGAGAGAGAGAAAACTaGGCGAGCCTGGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RGLNPTPVQVRSHEASSQGEREN*ASLELH
Trigger: GTGCAGCTCCAGGCTCGCGCAGTTTTCTCTCTCTCC...CTGGGAAGACGCCTCATGGGAACGAACTTGGACAGGTGTTGGGTTGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAACAATCATGCACCCGTaGACGTCCACCCCCTACCCA +
Preference number: 4 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLTIMHP*TSTPYP
Trigger: TGGGTAGGGGGTGGACGTGCACGGGTGCATGATTGT...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp AGAGGCCTCAACCCAACACCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGACAATCATGCACCCGTaGACGTCCACCCCCTACCCA +
Preference number: 4 (lower is better)
Translates to: RGLNPTPVQVRSHEASSQTIMHP*TSTPYP
Trigger: TGGGTAGGGGGTGGACGTGCACGGGTGCATGATTGT...CTGGGAAGACGCCTCATGGGAACGAACTTGGACAGGTGTTGGGTTGAGGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCTTTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: EPASFNFRILPPVWSSQLFCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAA...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGTTAAAGAGTCCGGGCTaGCCGCAGACGCGTACGTCA +
Preference number: 4 (lower is better)
Translates to: QCFLEESALLREPFMLDRLKSPG*PQTRTS
Trigger: TGACGTACGCGTCTGCGGCCAGCCCGGACTCTTTAA...CCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CCA 90 bp CAAGCAGCAGCGATGATCGGAGAGATACTTACAGACAGGCTTGCCCTAGCAAAGGGCAACGAGGGCCTGTaGTCCACGGGCACCCAGATC +
Preference number: 4 (lower is better)
Translates to: QAAAMIGEILTDRLALAKGNEGL*STGTQI
Trigger: GATCTGGGTGCCCGTGGACCACAGGCCCTCGTTGCC...CTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCTCCGATCATCGCTGCTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR CCA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAGCTTCCGGACTTTCATaGCTTCCTCATTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRASGLS*LPHCRG
Trigger: GCCCCGACAATGAGGAAGCCATGAAAGTCCGGAAGC...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp TTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCCGGGAGATCTACACGATGCGGCTCTaGATGTGGTCCTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: FRILPPVWSSQLQTCREIYTMRL*MWSCTR
Trigger: CCGGGTGCAGGACCACATCCAGAGCCGCATCGTGTA...GATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATTACACGATGCGGCTCTaGATGTGGTCCTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHYTMRL*MWSCTR
Trigger: CCGGGTGCAGGACCACATCCAGAGCCGCATCGTGTA...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp AGAGATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGCCGGCACAGGTAGATaGTACGCGGCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: RDTYRQACPSKGCPGSCVAGTGR*YAAARG
Trigger: TCCACGTGCAGCCGCGTACCATCTACCTGTGCCGGC...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR CCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAATGCTCTTCAGCTGGCTaGTCCACACGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKCSSAG*STRAGP
Trigger: AGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCA...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCAATGGTGCTCTTCAGCTaGCTGGTCCACACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSMVLFS*LVHTRR
Trigger: CCTGCGCGTGTGGACCAGCCAGCTGAAGAGCACCAT...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGGGTAGGACTCCCCGGTaGGGTAGCGGTAATAGTACT +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQGRTPR*GSGNST
Trigger: AGTACTATTACCGCTACCCCACCGGGGAGTCCTACC...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp CAGTTCGTAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCAGGTAGGACTCCCCGGTaGGGTAGCGGTAATAGTACT +
Preference number: 4 (lower is better)
Translates to: QFVDRLALAKVVQAAAWAGRTPR*GSGNST
Trigger: AGTACTATTACCGCTACCCCACCGGGGAGTCCTACC...TGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTACGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR CCA 90 bp TTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCCGGGAGATCTGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: FRILPPVWSSQLQTCREICEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...GATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp GTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTCTCCCATTTCCAAAGCCAGTCATGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: VSAAPGAFHVLSHFQSQSCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...TGACTGGCTTTGGAAATGGGAGAGAACATGAAAGGCTCCCGGAGCAGCGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414237.5
CDS-3UTR CCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LLRLMSGLGPFFASCFGNAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...GTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCGAAATGGAAATGGAATaGAACCGACACGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLEMEME*NRHVCL
Trigger: GAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CCA 90 bp AGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCGAAATGGAAATGGAATaGAACCGACACGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SGRGDTDGAKHGSLRPRLEMEME*NRHVCL
Trigger: GAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC...GAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp AATACAACCAAGTTAAGCACAATCATGCACCCGTGCACGTCCACCCCCTACCCAACCCACGTGGCTTTCTaGTGTCCAGCGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: NTTKLSTIMHPCTSTPYPTHVAF*CPAAEG
Trigger: CCCCTCGGCCGCTGGACACCAGAAAGCCACGTGGGT...TGGGTAGGGGGTGGACGTGCACGGGTGCATGATTGTGCTTAACTTGGTTGTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGAGAAGGTCTCCGAGGCTaGACATTCCTAGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGEGLRG*TFLGNP
Trigger: TGGGTTTCCTAGGAATGTCCAGCCTCGGAGACCTTC...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAAGCCCTTGCACATCTTTaGAGGCAGGCCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKALAHL*RQATGL
Trigger: CAGGCCTGTGGCCTGCCTCCAAAGATGTGCAAGGGC...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCAAAAACTGCGCGAGCCTaGAGCTGCACGGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSKTARA*SCTGMR
Trigger: CCGCATTCCCGTGCAGCTCCAGGCTCGCGCAGTTTT...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR CAA 72 bp CAAGGCAGATGCTCCAAGACAGTGTGCAGGCAGCTCTaGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QGRCSKTVCRQL*KKWLRVRPCLG
Trigger: GCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACACTGTCTTGGAGCATCTGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
3UTR CAA 72 bp TTGGTGGGTTCGGGGCTGGCTAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LVGSGLASGVTL*RLMSGLGPFFA
Trigger: TGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCGCTAGCCAGCCCCGAACCCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp CTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCCCACGTCAATCACCTTaGTCAGCGACAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LPQCFLEESALLREPFMFPRQSP*SATSPC
Trigger: ACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGG...GAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR TCA 90 bp CTGTATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATACCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: LYFTQLTLTWEIPHNHSIPAGQA*VAPDAA
Trigger: GGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGG...TATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATCAGGGTAGGTGTCCCTaGTCTCCTCGTAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHQGRCP*SPRRSA
Trigger: AGCTGACCTACGAGGAGATCAGGGACACCTACCCTG...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp TGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACAGTCAGGGTAGGTGTCCCTaGTCTCCTCGTAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: CFLEESALLREPFMFFHSQGRCP*SPRRSA
Trigger: AGCTGACCTACGAGGAGATCAGGGACACCTACCCTG...ACTGTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR TCA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTACTTCTTTGCATCCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLLLCIL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGGATGCAAAGAAG...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000536985.6
CDS-3UTR TCA 90 bp TCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SPEEVLRIRFASGGGQDTAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...TGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR TCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR TCA 90 bp AGAGGCCTCAACCCAACACCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGTCGATGTTCAAAGAATaGGGCCTGCGAGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RGLNPTPVQVRSHEASSQSMFKE*GLRGGH
Trigger: GTGTCCCCCTCGCAGGCCTCATTCTTTGAACATCGA...CTGGGAAGACGCCTCATGGGAACGAACTTGGACAGGTGTTGGGTTGAGGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATACTTTTGGCAGCCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHTFGSL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGGCTGCCAAAAGT...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AATACAACCAAGTTAAGCACAATCATGCACCCGTGCACGTCCACCCCCTACCCACGGAAAGCTCTGGGATaGTCGGGCGCAGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: NTTKLSTIMHPCTSTPYPRKALG*SGAVTA
Trigger: GGCTGTCACTGCGCCCGAGCATCCCAGAGCTTTCCG...TGGGTAGGGGGTGGACGTGCACGGGTGCATGATTGTGCTTAACTTGGTTGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGGCACCCAGATCTTCTaGACTCGGCTCTGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHGTQIF*TRLCVS
Trigger: ACTGACGCAGAGCCGAGTGCAGAAGATCTGGGTGCC...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCGCAGCTAAGGCACATTaGTTCCGGACTTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: QNSTVSPAASCQDQHSSPAAKAH*FRTFMA
Trigger: AGCCATGAAAGTCCGGAAGCAATGTGCCTTAGCTGC...GGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGCAGCTAAGGCACATTaGTTCCGGACTTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: EESALLREPFMFCPGSCVAAKAH*FRTFMA
Trigger: AGCCATGAAAGTCCGGAAGCAATGTGCCTTAGCTGC...CACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACACTGAGTCGCCCCCGATaGGGCCCTGGAGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTLSRPR*GPGGCA
Trigger: AGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAG...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTCTGAGTCGCCCCCGATaGGGCCCTGGAGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHALSRPR*GPGGCA
Trigger: AGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAG...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCCTGAGTCGCCCCCGATaGGGCCCTGGAGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFLSRPR*GPGGCA
Trigger: AGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAG...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp TCCCATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTCACTGGCAAACTTCTTaGCCCGGCTGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SHEASSQVKMHQTVTWRFHWQTS*PGWTGL
Trigger: CAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTG...AAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp AGAGATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGCACTGGCAAACTTCTTaGCCCGGCTGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RDTYRQACPSKGCPGSCVHWQTS*PGWTGL
Trigger: CAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTG...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR GCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQRSFRF*SSTNLL
Trigger: GAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCT...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHTSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCGAGGTGGAGGCCACATaGTCCTCAAAGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: SPQDTFCLGRRAGHKLSCEVEAT*SSKLLM
Trigger: CATCAACAGCTTTGAGGAGCATGTGGCCTCCACCTC...GCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGGAGGTGGAGGCCACATaGTCCTCAAAGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQEVEAT*SSKLLM
Trigger: CATCAACAGCTTTGAGGAGCATGTGGCCTCCACCTC...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCATGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAATGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGTGGAACCGACACGTCTaGCTCAGTGTTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KSSGYVLPRAEGRTQAKLWNRHV*LSVSWR
Trigger: CCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA...CAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCGGACACAAGCTAAGCTaGAGAAATGGAAATGGAATG +
Preference number: 4 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSGHKLS*RNGNGM
Trigger: CATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCC...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCGGACACAAGCTAAGCTaGAGAAATGGAAATGGAATG +
Preference number: 4 (lower is better)
Translates to: QTVPSMVLFGQGSPAAPPGHKLS*RNGNGM
Trigger: CATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCC...GGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR GCA 90 bp AAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGTCCCAGCTCCAAACGTaGCGGGAGATCACAGAAACG +
Preference number: 4 (lower is better)
Translates to: KSSGYVLPRAEGRTQAKLSQLQT*REITET
Trigger: CGTTTCTGTGATCTCCCGGCACGTTTGGAGCTGGGA...CAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTCAGGTCACACTTCTGCCAGCAGGAGAGCCAGGGTaGGGACCACCCAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: PTSTFLKRRWDSQVTLLPAGEPG*GPPSQL
Trigger: AAGTTGGCTGGGTGGTCCGCACCCTGGCTCTCCTGC...TGGCAGAAGTGTGACCTGAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp ACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAATTTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TIASHERVRSLLCILFREFCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAA...TTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CCA 90 bp CTTTCAGCAACTAGGAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGCCTCCTCTCCGGCTTaGCTGGGATGCCCCGCGCAC +
Preference number: 4 (lower is better)
Translates to: LSATRSLPPLILGFCHQCASSPA*LGCPAH
Trigger: GTGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGC...ACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTCCTAGTTGCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360521.7
CDS-3UTR CCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTGGCAACGAGGGCCTGTaGTCCACGGGCACCCAGATC +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHAGNEGL*STGTQI
Trigger: GATCTGGGTGCCCGTGGACCACAGGCCCTCGTTGCC...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTCGGTCTTACACGATGCGGCTCTaGATGTGGTCCTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: PFFASCFGNAMTESHARSYTMRL*MWSCTR
Trigger: CCGGGTGCAGGACCACATCCAGAGCCGCATCGTGTA...AGACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp ACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACCCCCGATGCGGCCCTaGAGGTTGTGCTCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: TIASHERVRSLLCILFREPPMRP*RLCSFS
Trigger: CGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGG...TTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp ACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATACTTCTTGCCCCGGCTaGACAGGCCTGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: TNRLRRQVPCFPSPQKCHTSCPG*TGLSRP
Trigger: GGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGT...ATGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp GCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTCAGCCAGGTATCACTTCTTGCCCCGGCTaGACAGGCCTGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: ASQSPQQLRLIGLFQPGITSCPG*TGLSRP
Trigger: GGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGT...GATACCTGGCTGAAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp AGAGATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGTGCTCTTCAGCTGGCTaGTCCACACGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RDTYRQACPSKGCPGSCVCSSAG*STRAGP
Trigger: AGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCA...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR CCA 90 bp AGAGGCCTCAACCCAACACCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGGGTAGGACTCCCCGGTaGGGTAGCGGTAATAGTACT +
Preference number: 4 (lower is better)
Translates to: RGLNPTPVQVRSHEASSQGRTPR*GSGNST
Trigger: AGTACTATTACCGCTACCCCACCGGGGAGTCCTACC...CTGGGAAGACGCCTCATGGGAACGAACTTGGACAGGTGTTGGGTTGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CAGAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: QKWKWNGTDTSASVFPGGAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...TCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
CDS-3UTR CCA 90 bp TCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCATGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SVFPGGVSAAPGAFHVLPCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...TGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGAAATGGAAATGGAATaGAACCGACACGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAEMEME*NRHVCL
Trigger: GAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp CACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCACTCTTCAGGAAACCCAGAGAGTaGAGGTGGGGGCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: HKSVIDAMKGRPGQSPLFRKPRE*RWGPHG
Trigger: GCCGTGGGGCCCCCACCTCCACTCTCTGGGTTTCCT...GAAGAGTGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp AGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGACAGTGTTGTACTTTTaGCAGCCTCTGACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RSQRCSGSLSCFVQAAAWTVLYF*QPLTSP
Trigger: GGGAGAGGTCAGAGGCTGCCAAAAGTACAACACTGT...CCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCCTTTGGCCCACAGGCTaGATTAATGGAGACACCGAA +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSLWPTG*INGDTE
Trigger: TTCGGTGTCTCCATTAATCCAGCCTGTGGGCCAAAG...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536985.6
CDS-3UTR TCA 90 bp AAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTTCTTTGCATCCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: KKSSGYVLPRAEGRTQAKLLCIL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGGATGCAAAGAAG...CTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000536985.6
CDS-3UTR TCA 90 bp AAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KSSGYVLPRAEGRTQAKLAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...CAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR TCA 90 bp GTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VFPGGVSAAPGAFHVLSRAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...CCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR TCA 90 bp GCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ASVFPGGVSAAPGAFHVLAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...CAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR TCA 90 bp AGGAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCCCAGGACCTGTCCCTTaGGCTGGGAGGAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: RSLPPLILGFCHQCGLPSPGPVP*AGRRIS
Trigger: TGAGATCCTCCTCCCAGCTCAAGGGACAGGTCCTGG...GCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp AAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGGCCTTTCATGTTCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: KKSSGYVLPRAEGRTQAKAFHVL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGAACATGAAAGGC...CTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441697.1
ENST00000450232.1
CDS-3UTR GCA 90 bp CCTCTGTATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCGCCACCAGGCCCTGCTaGTCGCCTCCTCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: PLYFTQLTLTWEIPHNHSATRPC*SPPLRL
Trigger: AAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGC...GCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp TGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACAGTCTGCCAGGGGAAACGTaGTTTGGGCTAAGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: CFLEESALLREPFMFFHSLPGET*FGLSSG
Trigger: TCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAG...ACTGTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR GCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATCTGCCAGGGGAAACGTaGTTTGGGCTAAGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHLPGET*FGLSSG
Trigger: TCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAG...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp ATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCATTCTGCACTCGGCTCTaGGTCAGTTCCAACGGCATC +
Preference number: 4 (lower is better)
Translates to: ILTDRLALAKVVQAAAWAFCTRL*VSSNGI
Trigger: GATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAA...TGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR GCA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGGCAGCTAAGGCACATTaGTTCCGGACTTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQAAKAH*FRTFMA
Trigger: AGCCATGAAAGTCCGGAAGCAATGTGCCTTAGCTGC...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: RKKSSGYVLPRAEGRTQAVVHGF*RVAVFV
Trigger: TACAAAGACTGCAACTCGGCAGAAGCCATGGACGAC...AGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CCTCTGTATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCCGGCCCTGGAGGTTGTaGTCGTTCTCGCCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: PLYFTQLTLTWEIPHNHSRPWRL*SFSPCR
Trigger: CCGGCACGGCGAGAACGAGCACAACCTCCAGGGCCG...GCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLRSFRF*SSTNLL
Trigger: GAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCT...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTCTCCCATTTCCAAAGCGAGGTGGAGGCCACATaGTCCTCAAAGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: GGVSAAPGAFHVLSHFQSEVEAT*SSKLLM
Trigger: CATCAACAGCTTTGAGGAGCATGTGGCCTCCACCTC...GCTTTGGAAATGGGAGAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414237.5
CDS-3UTR GCA 90 bp CAGACAGTTCGTAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGAGGTGGAGGCCACATaGTCCTCAAAGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: QTVRRQACPSKGCPGSCVEVEAT*SSKLLM
Trigger: CATCAACAGCTTTGAGGAGCATGTGGCCTCCACCTC...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTACGAACTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR GCA 90 bp AGAAACGAAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCAAGGGGACACAGACGGTaGCAAGCATGGTTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: RNETKQHSVPSGLLSGPARGHRR*QAWFSS
Trigger: CGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCT...TGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTTCGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp CTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGTTAATTTTAGGATTCTaGCACCAGTGTGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LVSSGRGDTDGAKHGSLRLILGF*HQCGLP
Trigger: GGGAAGACCACACTGGTGGCAGAATCCTAAAATTAA...CCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCAAGCTCAGGGACTTCCTaGAGAAGAGGCCTCAACCCA +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSSSGTS*RRGLNP
Trigger: TGGGTTGAGGCCTCTTCTGCAGGAAGTCCCTGAGCT...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCAGACGACAGGTCCCATaGTTTCCATCACCACAAAAG +
Preference number: 4 (lower is better)
Translates to: QNSTVSPAASCQDQHSSPRRQVP*FPSPQK
Trigger: CTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCT...GGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp TCCCATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTGGAGCTGCACGGGAATaGGGACAGAGACATCCTCTC +
Preference number: 4 (lower is better)
Translates to: SHEASSQVKMHQTVTWRFGAARE*GQRHPL
Trigger: GAGAGGATGTCTCTGTCCGCATTCCCGTGCAGCTCC...AAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp TCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCAAGGGGAAACGTGCTTTaGGCTAAGTTCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: SVFPGGVSAAPGAFHVLPRGNVL*AKFRTL
Trigger: GAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCT...TGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGAGGGGAAACGTGCTTTaGGCTAAGTTCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILRGNVL*AKFRTL
Trigger: GAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCT...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGGAAGCTTCTGGCAACGAGGGCCTGTaGTCCACGGGCACCCAGATC +
Preference number: 4 (lower is better)
Translates to: QLTLTWEIPHNHSIREASGNEGL*STGTQI
Trigger: GATCTGGGTGCCCGTGGACCACAGGCCCTCGTTGCC...AGAAGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp CTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACTTGGCCCACAGGATCTaGGCAACGAGGGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LLRLMSGLGPFFASCFGNLAHRI*ATRACG
Trigger: ACCACAGGCCCTCGTTGCCCAGATCCTGTGGGCCAA...GTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp AGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACAGGAGTTGGTCAGCTTTaGCCCACAGGATCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SVSWRSQRCSGSLSCSSTGVGQL*PTGSGQ
Trigger: TTGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCC...TGTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGGCTTCCGGACTTTCATaGCTTCCTCATTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILASGLS*LPHCRG
Trigger: GCCCCGACAATGAGGAAGCCATGAAAGTCCGGAAGC...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CATCACCACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCAGCCGGCACAGGTAGATaGTACGCGGCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: HHHKSVIDAMKGRPGQSPAGTGR*YAAARG
Trigger: TCCACGTGCAGCCGCGTACCATCTACCTGTGCCGGC...TGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTGGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTGCCGGCACAGGTAGATaGTACGCGGCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHAAGTGR*YAAARG
Trigger: TCCACGTGCAGCCGCGTACCATCTACCTGTGCCGGC...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGGGTAGGACTCCCCGGTaGGGTAGCGGTAATAGTACT +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILGRTPR*GSGNST
Trigger: AGTACTATTACCGCTACCCCACCGGGGAGTCCTACC...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCGGTAGGACTCCCCGGTaGGGTAGCGGTAATAGTACT +
Preference number: 4 (lower is better)
Translates to: LSVSWRSQRCSGSLSCFVGRTPR*GSGNST
Trigger: AGTACTATTACCGCTACCCCACCGGGGAGTCCTACC...GACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGGTAGGACTCCCCGGTaGGGTAGCGGTAATAGTACT +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHGRTPR*GSGNST
Trigger: AGTACTATTACCGCTACCCCACCGGGGAGTCCTACC...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCAGGTAGGACTCCCCGGTaGGGTAGCGGTAATAGTACT +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSGRTPR*GSGNST
Trigger: AGTACTATTACCGCTACCCCACCGGGGAGTCCTACC...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CCA 90 bp ACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGGAAGCTGCAGGGCGGCCGAGGTaGAGGCCACATGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: TQLTLTWEIPHNHSIREAAGRPR*RPHAPQ
Trigger: TTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGC...AGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp TCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SHERVRSLLCILFRERHDCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...GTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACAGGCAGGCCACAGGCCTaGAAGGTGTGTGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTGRPQA*KVCGPA
Trigger: TGCAGGTCCACACACCTTCCAGGCCTGTGGCCTGCC...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp AACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCGGGGAGGGCTTGAATaGTTCAGCATGAAAATCCCC +
Preference number: 4 (lower is better)
Translates to: NKTAQCPQRPPVRTSTHHRGGLE*FSMKIP
Trigger: GGGGATTTTCATGCTGAACCATTCAAGCCCTCCCCG...GTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCAAAACTGCGCGAGCCTaGAGCTGCACGGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: EPASFNFRILPPVWSSQLKTARA*SCTGMR
Trigger: CCGCATTCCCGTGCAGCTCCAGGCTCGCGCAGTTTT...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGCGTTATTTTGTGGGGTaGAGAGTTGGAGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQRYFVG*RVGGIS
Trigger: ACTGATTCCTCCAACTCTCCACCCCACAAAATAACG...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp ACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGGAAGCTTCTCAGAGTTGCCCTTCAGGGGGCTaGACTGGTGGCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TLTWEIPHNHSIREASQSCPSGG*TGGSGS
Trigger: GGACCCTGAGCCACCAGTCCAGCCCCCTGAAGGGCA...ACTCTGAGAAGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp ATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCACGTCAATCACCTTaGTCAGCGACAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ILTDRLALAKVVQAAAWAPRQSP*SATSPC
Trigger: ACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGG...TGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR TCA 90 bp TCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGCCACGTCAATCACCTTaGTCAGCGACAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SVFPGGVSAAPGAFHVRQPRQSP*SATSPC
Trigger: ACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGG...CTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR TCA 90 bp TTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCAAACGTGCCGGGAGATCACCTACCCCAGGGTTTaGGGCAATGAGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: FRILPPVWSSQLQTCREITYPRV*GNEEKP
Trigger: TGGTTTCTCCTCATTGCCTCAAACCCTGGGGTAGGT...GATCTCCCGGCACGTTTGGAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp CCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAGCTTTGAGACATCCTaGAAAGGGTCATTTGGACAA +
Preference number: 4 (lower is better)
Translates to: PSPEEVLRIRFASGGGQDSFETS*KGSFGQ
Trigger: TTGTCCAAATGACCCTTTTCAGGATGTCTCAAAGCT...GTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp AGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCGGCAGGAAAGAAAAGTaGCCTTTGGCACAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: SPQDTFCLGRRAGHKLSCGRKEK*PLAQAL
Trigger: CAAAGCTTGTGCCAAAGGTCACTTTTCTTTCCTGCC...GCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp AGCAGTGCAAGCAGCAGCGATGATCGGAGAGATACTTACAGACAGGCTTGCCCTCTGCCAGGGGAAACGTaGTTTGGGCTAAGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SSASSSDDRRDTYRQACPLPGET*FGLSSG
Trigger: TCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAG...AGGGCAAGCCTGTCTGTAAGTATCTCTCCGATCATCGCTGCTGCTTGCACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR GCA 90 bp ACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAAGGGCGTTTCCTGCGCTaGCAGGGGAAACGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TIASHERVRSLLCILFREGRFLR*QGKRAL
Trigger: CAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCC...TTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGGCACCCAGATCTTCTaGACTCGGCTCTGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: DTIASHERVRSLLCILFRGTQIF*TRLCVS
Trigger: ACTGACGCAGAGCCGAGTGCAGAAGATCTGGGTGCC...CCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAATGGCTTCTGCCGAGTTaGAGTCTTTGTAATCCGGGC +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKWLLPS*SLCNPG
Trigger: GCCCGGATTACAAAGACTGCAACTCGGCAGAAGCCA...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCATGGCTTCTGCCGAGTTaGAGTCTTTGTAATCCGGGC +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSWLLPS*SLCNPG
Trigger: GCCCGGATTACAAAGACTGCAACTCGGCAGAAGCCA...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: VFPGGVSAAPGAFHVLSRVVHGF*RVAVFV
Trigger: TACAAAGACTGCAACTCGGCAGAAGCCATGGACGAC...CCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR GCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGGCTCCTCCACGAACTTaGTCAGAGCACTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILAPPRT*SEHWQT
Trigger: AGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGC...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGCTCCTCCACGAACTTaGTCAGAGCACTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: ASHERVRSLLCILFRERHAPPRT*SEHWQT
Trigger: AGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGC...ATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACGGACACAAGCTAAGCTaGAGAAATGGAAATGGAATG +
Preference number: 4 (lower is better)
Translates to: VSAAPGAFHVLSRQLRGHGHKLS*RNGNGM
Trigger: CATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCC...GTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475881.5
CDS-3UTR GCA 90 bp TCCCATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTCCCAGCTCCAAACGTaGCGGGAGATCACAGAAACG +
Preference number: 4 (lower is better)
Translates to: SHEASSQVKMHQTVTWRFSQLQT*REITET
Trigger: CGTTTCTGTGATCTCCCGGCACGTTTGGAGCTGGGA...AAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAGACGACAGGTCCCATaGTTTCCATCACCACAAAAG +
Preference number: 4 (lower is better)
Translates to: RKKSSGYVLPRAEGRTQARRQVP*FPSPQK
Trigger: CTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCT...AGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAGACGACAGGTCCCATaGTTTCCATCACCACAAAAG +
Preference number: 4 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRRRQVP*FPSPQK
Trigger: CTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCT...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCCATTTGGACAAACTCTaGTGCCGAGTTTCCAAATGG +
Preference number: 4 (lower is better)
Translates to: QNSTVSPAASCQDQHSSPHLDKL*CRVSKW
Trigger: CCATTTGGAAACTCGGCAGCAGAGTTTGTCCAAATG...GGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CTGTATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATACCGAGATCCCGACGCTaGCAGGAGAGCGGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: LYFTQLTLTWEIPHNHSIPRSRR*QESGRR
Trigger: TCGGCGGCCGCTCTCCTGCCAGCGTCGGGATCTCGG...TATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCTTGGCCCACAGGATCTaGGCAACGAGGGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFLAHRI*ATRACG
Trigger: ACCACAGGCCCTCGTTGCCCAGATCCTGTGGGCCAA...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTTTGGCCCACAGGATCTaGGCAACGAGGGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHALAHRI*ATRACG
Trigger: ACCACAGGCCCTCGTTGCCCAGATCCTGTGGGCCAA...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp AGAGATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGAGTTGGTCAGCTTTaGCCCACAGGATCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: RDTYRQACPSKGCPGSCVGVGQL*PTGSGQ
Trigger: TTGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCC...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR CCA 90 bp TCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACGGAGTTGGTCAGCTTTaGCCCACAGGATCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SHERVRSLLCILFRERHDGVGQL*PTGSGQ
Trigger: TTGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCC...GTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp TCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACGCTTCCGGACTTTCATaGCTTCCTCATTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SHERVRSLLCILFRERHDASGLS*LPHCRG
Trigger: GCCCCGACAATGAGGAAGCCATGAAAGTCCGGAAGC...GTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp ACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAATACACGATGCGGCTCTaGATGTGGTCCTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: TIASHERVRSLLCILFREYTMRL*MWSCTR
Trigger: CCGGGTGCAGGACCACATCCAGAGCCGCATCGTGTA...TTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp ACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATTGCTCTTCAGCTGGCTaGTCCACACGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TNRLRRQVPCFPSPQKCHCSSAG*STRAGP
Trigger: AGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCA...ATGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CAGAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGATGCTCTTCAGCTGGCTaGTCCACACGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QKWKWNGTDTSASVFPGGCSSAG*STRAGP
Trigger: AGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCA...TCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR CCA 90 bp ACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAAATGGTGCTCTTCAGCTaGCTGGTCCACACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: TIASHERVRSLLCILFREMVLFS*LVHTRR
Trigger: CCTGCGCGTGTGGACCAGCCAGCTGAAGAGCACCAT...TTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp ACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAATGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: TIASHERVRSLLCILFRECEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...TTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp CATAAACTACCCATCATCCATTGGAGACCTCTGTATTTTACACAACTGACACTGGTCCAGGCAGCTGCGTaGGCACCTCCGGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: HKLPIIHWRPLYFTQLTLVQAAA*APPGAG
Trigger: GCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGAC...CAGTGTCAGTTGTGTAAAATACAGAGGTCTCCAATGGATGATGGGTAGTTTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp TCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAGAAATGGAAATGGAATaGAACCGACACGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SPEEVLRIRFASGGGQDTEMEME*NRHVCL
Trigger: GAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC...TGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGGAAATGGAAATGGAATaGAACCGACACGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKEMEME*NRHVCL
Trigger: GAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CCA 90 bp ACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATAAAACTGCGCGAGCCTaGAGCTGCACGGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: TNRLRRQVPCFPSPQKCHKTARA*SCTGMR
Trigger: CCGCATTCCCGTGCAGCTCCAGGCTCGCGCAGTTTT...ATGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CCCCCAGGGCAAGACACCCCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTGTCCCCGTTATTTTGTaGGGTGGAGAGTTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PPGQDTPTSTFLKRRWDSVPVIL*GGELEE
Trigger: TTCCTCCAACTCTCCACCCCACAAAATAACGGGGAC...AGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGGGGTGTCTTGCCCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp AAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGGGAGTTGGTCAGCTTTaGCCCACAGGCTGGATTAAT +
Preference number: 4 (lower is better)
Translates to: KSSGYVLPRAEGRTQAKLGVGQL*PTGWIN
Trigger: ATTAATCCAGCCTGTGGGCCAAAGCTGACCAACTCC...CAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536985.6
CDS-3UTR CCA 90 bp ACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGGAAGCTTCTCAGAGTTTCAGGGGGCTGGACTaGTGGCTCAGGGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TLTWEIPHNHSIREASQSFRGLD*WLRVPS
Trigger: GGAAGGGACCCTGAGCCACCAGTCCAGCCCCCTGAA...ACTCTGAGAAGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGTTTTCTTTGGCAAAATaGAGGATCATGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQFSLAK*RIMCLL
Trigger: GAGGAGACACATGATCCTTCATTTTGCCAAAGAAAA...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCATTTTCTTTGGCAAAATaGAGGATCATGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAFSLAK*RIMCLL
Trigger: GAGGAGACACATGATCCTTCATTTTGCCAAAGAAAA...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp AGCCTTTCATGTTCTTCCACAGTTAGTAAGGAGAAAACTTTGAGAAAATGTGACCCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCC +
Preference number: 4 (lower is better)
Translates to: SLSCSSTVSKEKTLRKCDPAGQA*VAPDAA
Trigger: GGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGG...GTCACATTTTCTCAAAGTTTTCTCCTTACTAACTGTGGAAGAACATGAAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR TCA 90 bp CCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PVQVRSHEASSQVKMHQTAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...TGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGAACGAACTTGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp CCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAACTTTGAGAAAATGTaGCAGACAGTTCGTAGACAG +
Preference number: 4 (lower is better)
Translates to: PSPEEVLRIRFASGGGQDNFEKM*QTVRRQ
Trigger: CTGTCTACGAACTGTCTGTCACATTTTCTCAAAGTT...GTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379785.5
CDS-3UTR GCA 90 bp GAATGGTTGTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCCTCGCCACCAGGCCCTaGTGCTCGCCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: EWLYGNSKHYFHFYKMRILATRP*CSPPLR
Trigger: CCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAG...GATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAACCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp AGCATAAGGGAAGCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTCGGAAAGCTCTGGGATaGTCGGGCGCAGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: SIREASQSPQQLRLIGLFRKALG*SGAVTA
Trigger: GGCTGTCACTGCGCCCGAGCATCCCAGAGCTTTCCG...AAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGCTTCCCTTATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp CTGTATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATAGCGGGGCTCGACGTGTaGTGCGAGGGTAGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LYFTQLTLTWEIPHNHSIAGLDV*CEGSEA
Trigger: AGCCTCGCTACCCTCGCAGCACACGTCGAGCCCCGC...TATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCTGCCAGGGGAAACGTaGTTTGGGCTAAGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: EPASFNFRILPPVWSSQLLPGET*FGLSSG
Trigger: TCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAG...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp CAGCATAAGGGAAGCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTGGGCGTTTCCTGCGCTaGCAGGGGAAACGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: QHKGSFSESSAAQVNWSLGRFLR*QGKRAL
Trigger: CAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCC...AAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGCTTCCCTTATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp ACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATGGCACCCAGATCTTCTaGACTCGGCTCTGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: TNRLRRQVPCFPSPQKCHGTQIF*TRLCVS
Trigger: ACTGACGCAGAGCCGAGTGCAGAAGATCTGGGTGCC...ATGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTGGCACCCAGATCTTCTaGACTCGGCTCTGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHAGTQIF*TRLCVS
Trigger: ACTGACGCAGAGCCGAGTGCAGAAGATCTGGGTGCC...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGGCAGCTAAGGCACATTaGTTCCGGACTTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: RGDTIASHERVRSLLCILAAKAH*FRTFMA
Trigger: AGCCATGAAAGTCCGGAAGCAATGTGCCTTAGCTGC...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AGAAACGAAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCAGCAGCTAAGGCACATTaGTTCCGGACTTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: RNETKQHSVPSGLLSGPAAAKAH*FRTFMA
Trigger: AGCCATGAAAGTCCGGAAGCAATGTGCCTTAGCTGC...TGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTTCGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp AGCAGTGCAAGCAGCAGCGATGATCGGAGAGATACTTACAGACAGGCTTGCCCTTGGCTTCTGCCGAGTTaGAGTCTTTGTAATCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSASSSDDRRDTYRQACPWLLPS*SLCNPG
Trigger: GCCCGGATTACAAAGACTGCAACTCGGCAGAAGCCA...AGGGCAAGCCTGTCTGTAAGTATCTCTCCGATCATCGCTGCTGCTTGCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR GCA 90 bp TTCATGTTAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCAGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: FMLDRLALAKVVQAAAWAVVHGF*RVAVFV
Trigger: TACAAAGACTGCAACTCGGCAGAAGCCATGGACGAC...TGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTAACATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR GCA 90 bp ACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAAACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: TIASHERVRSLLCILFRETSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...TTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: NQQAETTGPMLSITTKVSWRSQR*SGSLSC
Trigger: ACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA...TGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp ATGAGGAGAAACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACATCCCAGCTCCAAACGTaGCGGGAGATCACAGAAACG +
Preference number: 4 (lower is better)
Translates to: MRRNQQAETTGPMLSITTSQLQT*REITET
Trigger: CGTTTCTGTGATCTCCCGGCACGTTTGGAGCTGGGA...TGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGTTTCTCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAACTTCCCAGGTCAAGATaGACCAAACAGTCACGTGGA +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKLPRSR*TKQSRG
Trigger: TCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAG...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCATGCTCCAAGACAGTGTaGAGGCAGCTCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSCSKTV*RQLLKK
Trigger: CTTCTTCAAGAGCTGCCTGCACACTGTCTTGGAGCA...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp ATGAGGAGAAACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACACAGGCACAAGGCAGATaGTCCAAGACAGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: MRRNQQAETTGPMLSITTQAQGR*SKTVCR
Trigger: CCTGCACACTGTCTTGGAGCATCTGCCTTGTGCCTG...TGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGTTTCTCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACTTGGACAAACTCTGCTaGCGAGTTTCCAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHLDKLC*RVSKWF
Trigger: AAACCATTTGGAAACTCGGCAGCAGAGTTTGTCCAA...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTTTAAAGAGTCCGGGCTaGCCGCAGACGCGTACGTCA +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHALKSPG*PQTRTS
Trigger: TGACGTACGCGTCTGCGGCCAGCCCGGACTCTTTAA...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp AGGAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCAGACGGTGCCAAGCATaGTTCTCTTCGGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: RSLPPLILGFCHQCGLPSRRCQA*FSSAKA
Trigger: AGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCT...GCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp AGAAACGAAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCAGTCCCCGTTATTTTGTaGGGTGGAGAGTTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RNETKQHSVPSGLLSGPAVPVIL*GGELEE
Trigger: TTCCTCCAACTCTCCACCCCACAAAATAACGGGGAC...TGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTTCGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTTTTCTTTGGCAAAATaGAGGATCATGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSFSLAK*RIMCLL
Trigger: GAGGAGACACATGATCCTTCATTTTGCCAAAGAAAA...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp CCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTCAGGTCACACTTCTGCCACCACGTCAATCACCTTaGTCAGCGACAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PTSTFLKRRWDSQVTLLPPRQSP*SATSPC
Trigger: ACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGG...TGGCAGAAGTGTGACCTGAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp CATCACCACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCACTTCTTTGCATCCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: HHHKSVIDAMKGRPGQSPLLCIL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGGATGCAAAGAAG...TGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTGGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp AAGGGAAGCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTCAGCCCTTCTTTGCATCCTCTaGCCTCTCCCGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: KGSFSESSAAQVNWSLSALLCIL*PLPVCA
Trigger: TGCACACACCGGGAGAGGTCAGAGGATGCAAAGAAG...GGCTGAAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGCTTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp GACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: DTIASHERVRSLLCILFRAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...CCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp CCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACACAACATCTACGTTCCTaGAGAGAAGGTGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: PVQVRSHEASSQVKMHQTQHLRS*REGGTL
Trigger: GAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTG...TGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGAACGAACTTGGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCACCTACCCCAGGGTTTaGGGCAATGAGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: EPASFNFRILPPVWSSQLTYPRV*GNEEKP
Trigger: TGGTTTCTCCTCATTGCCTCAAACCCTGGGGTAGGT...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp CAGTTCGTAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCATCTAAGAGAAAGGTCTaGCTAGTACTAGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: QFVDRLALAKVVQAAAWASKRKV*LVLAQC
Trigger: ACACTGTGCTAGTACTAGTCAGACCTTTCTCTTAGA...TGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTACGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR TCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTGTTTCGGGAACGCCATaGCAGAAAGTCACGCTCGGT +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHAVSGTP*QKVTLG
Trigger: ACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAAC...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTGCATCATTCCGGACCCTCGCCTGTaGGGGGCTCGACGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ELEALFPLLQNAYLSCIIPDPRL*GARRVL
Trigger: CAGCACACGTCGAGCCCCGCACAGGCGAGGGTCCGG...AATGATGCAAGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp GCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTCAGCCAGGTATCCTGCCAGGGGAAACGTaGTTTGGGCTAAGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: ASQSPQQLRLIGLFQPGILPGET*FGLSSG
Trigger: TCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAG...GATACCTGGCTGAAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp TGGTTGTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCGGCCGGGCGTTTCCTaGGCTGCCAGGGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: WLYGNSKHYFHFYKMRISRPGVS*AARGNV
Trigger: CACGTTTCCCCTGGCAGCGCAGGAAACGCCCGGCCG...AGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp ACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATTTCTGCACTCGGCTCTaGGTCAGTTCCAACGGCATC +
Preference number: 4 (lower is better)
Translates to: TNRLRRQVPCFPSPQKCHFCTRL*VSSNGI
Trigger: GATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAA...ATGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR GCA 90 bp CCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTCAGGTCACACTTCTGCCATGGCTTCTGCCGAGTTaGAGTCTTTGTAATCCGGGC +
Preference number: 4 (lower is better)
Translates to: PTSTFLKRRWDSQVTLLPWLLPS*SLCNPG
Trigger: GCCCGGATTACAAAGACTGCAACTCGGCAGAAGCCA...TGGCAGAAGTGTGACCTGAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGTGGCTTCTGCCGAGTTaGAGTCTTTGTAATCCGGGC +
Preference number: 4 (lower is better)
Translates to: DTIASHERVRSLLCILFRWLLPS*SLCNPG
Trigger: GCCCGGATTACAAAGACTGCAACTCGGCAGAAGCCA...CCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp CCTGTCCAAGTTCGTTCCCATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: PVQVRSHEASSQVKMHQTVVHGF*RVAVFV
Trigger: TACAAAGACTGCAACTCGGCAGAAGCCATGGACGAC...TGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGAACGAACTTGGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp TCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: SHERVRSLLCILFRERHDVVHGF*RVAVFV
Trigger: TACAAAGACTGCAACTCGGCAGAAGCCATGGACGAC...GTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp ATGAGGAGAAACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAGCTCCTCCACGAACTTaGTCAGAGCACTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: MRRNQQAETTGPMLSITTAPPRT*SEHWQT
Trigger: AGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGC...TGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGTTTCTCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: DTIASHERVRSLLCILFRRSFRF*SSTNLL
Trigger: GAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCT...CCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AGGAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCGAGGTGGAGGCCACATaGTCCTCAAAGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: RSLPPLILGFCHQCGLPSEVEAT*SSKLLM
Trigger: CATCAACAGCTTTGAGGAGCATGTGGCCTCCACCTC...GCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp ACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATTGGAACCGACACGTCTaGCTCAGTGTTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TNRLRRQVPCFPSPQKCHWNRHV*LSVSWR
Trigger: CCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA...ATGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCGGACACAAGCTAAGCTaGAGAAATGGAAATGGAATG +
Preference number: 4 (lower is better)
Translates to: LPQCFLEESALLREPFMFGHKLS*RNGNGM
Trigger: CATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCC...GAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000414237.5
CDS-3UTR GCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGGGACACAAGCTAAGCTaGAGAAATGGAAATGGAATG +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKGHKLS*RNGNGM
Trigger: CATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCC...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAGGACACAAGCTAAGCTaGAGAAATGGAAATGGAATG +
Preference number: 4 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRGHKLS*RNGNGM
Trigger: CATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCC...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR GCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACAAAATGAAGAGCTTTaGCCGTGGTCTCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSQNEEL*PWSQDR
Trigger: TCTGTCCTGAGACCACGGGCAAAGCTCTTCATTTTG...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp ACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATAGGGGAAACGTGCTTTaGGCTAAGTTCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: TNRLRRQVPCFPSPQKCHRGNVL*AKFRTL
Trigger: GAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCT...ATGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR CCA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTAGGGGAAACGTGCTTTaGGCTAAGTTCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: EMEMEWNRHVCLSVSWRSRGNVL*AKFRTL
Trigger: GAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCT...ACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR CCA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTGGAGTTGGTCAGCTTTaGCCCACAGGATCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: EMEMEWNRHVCLSVSWRSGVGQL*PTGSGQ
Trigger: TTGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCC...ACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR CCA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGAGTTGGTCAGCTTTaGCCCACAGGATCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFGVGQL*PTGSGQ
Trigger: TTGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCC...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACAGCTTCCGGACTTTCATaGCTTCCTCATTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTASGLS*LPHCRG
Trigger: GCCCCGACAATGAGGAAGCCATGAAAGTCCGGAAGC...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTGCTTCCGGACTTTCATaGCTTCCTCATTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHAASGLS*LPHCRG
Trigger: GCCCCGACAATGAGGAAGCCATGAAAGTCCGGAAGC...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CCA 90 bp ACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATGGTAGGACTCCCCGGTaGGGTAGCGGTAATAGTACT +
Preference number: 4 (lower is better)
Translates to: TNRLRRQVPCFPSPQKCHGRTPR*GSGNST
Trigger: AGTACTATTACCGCTACCCCACCGGGGAGTCCTACC...ATGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp TGGGAAATCCCACATAACCACAGCATAAGGGAAGCTTCTCAGAGTCCTCAGCAGGGTAGGACTCCCCGGTaGGGTAGCGGTAATAGTACT +
Preference number: 4 (lower is better)
Translates to: WEIPHNHSIREASQSPQQGRTPR*GSGNST
Trigger: AGTACTATTACCGCTACCCCACCGGGGAGTCCTACC...CTGCTGAGGACTCTGAGAAGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp TCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCAGAAATGGAAATGGAATaGAACCGACACGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SVFPGGVSAAPGAFHVLPEMEME*NRHVCL
Trigger: GAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC...TGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379785.5
CDS-3UTR TCA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGTTTTCTTTGGCAAAATaGAGGATCATGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKFSLAK*RIMCLL
Trigger: GAGGAGACACATGATCCTTCATTTTGCCAAAGAAAA...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR TCA 90 bp AGCATAAGGGAAGCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTCAGGGTAGGTGTCCCTaGTCTCCTCGTAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SIREASQSPQQLRLIGLFQGRCP*SPRRSA
Trigger: AGCTGACCTACGAGGAGATCAGGGACACCTACCCTG...AAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGCTTCCCTTATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp CATCACCACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCAGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: HHHKSVIDAMKGRPGQSPAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...TGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTGGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AGGAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCGCAGCTAAGGCACATTaGTTCCGGACTTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: RSLPPLILGFCHQCGLPSAAKAH*FRTFMA
Trigger: AGCCATGAAAGTCCGGAAGCAATGTGCCTTAGCTGC...GCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACACATTTGGCTTCTGCCGAGTTaGAGTCTTTGTAATCCGGGC +
Preference number: 4 (lower is better)
Translates to: GVFPGQDAPNSHVEVLHIWLLPS*SLCNPG
Trigger: GCCCGGATTACAAAGACTGCAACTCGGCAGAAGCCA...AATGTGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GTATCTCCCTCCCTGTCCAGATTCATGTTACCTCTCTCCCTATCTAGGCCCTTCGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: VSPSLSRFMLPLSLSRPFVVHGF*RVAVFV
Trigger: TACAAAGACTGCAACTCGGCAGAAGCCATGGACGAC...GAAGGGCCTAGATAGGGAGAGAGGTAACATGAATCTGGACAGGGAGGGAGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CATAAACTACCCATCATCCATTGGAGACCTCTGTATTTTACACAACTGACACTGCTGAGTCGCCCCCGATaGGGCCCTGGAGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: HKLPIIHWRPLYFTQLTLLSRPR*GPGGCA
Trigger: AGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAG...CAGTGTCAGTTGTGTAAAATACAGAGGTCTCCAATGGATGATGGGTAGTTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTGCTCCTCCACGAACTTaGTCAGAGCACTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: EMEMEWNRHVCLSVSWRSAPPRT*SEHWQT
Trigger: AGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGC...ACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR GCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTGCTCCTCCACGAACTTaGTCAGAGCACTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHAAPPRT*SEHWQT
Trigger: AGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGC...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTCAGCCAGGTATCGCTCCTCCACGAACTTaGTCAGAGCACTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: ASQSPQQLRLIGLFQPGIAPPRT*SEHWQT
Trigger: AGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGC...GATACCTGGCTGAAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp ACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAAGAGGTGGAGGCCACATaGTCCTCAAAGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: TIASHERVRSLLCILFREEVEAT*SSKLLM
Trigger: CATCAACAGCTTTGAGGAGCATGTGGCCTCCACCTC...TTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGAGGTGGAGGCCACATaGTCCTCAAAGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFEVEAT*SSKLLM
Trigger: CATCAACAGCTTTGAGGAGCATGTGGCCTCCACCTC...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCTTCCCAGGTCAAGATaGACCAAACAGTCACGTGGA +
Preference number: 4 (lower is better)
Translates to: EPASFNFRILPPVWSSQLLPRSR*TKQSRG
Trigger: TCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAG...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAACATTTGGACAAACTCTaGTGCCGAGTTTCCAAATGG +
Preference number: 4 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKHLDKL*CRVSKW
Trigger: CCATTTGGAAACTCGGCAGCAGAGTTTGTCCAAATG...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp ACTGAAAGTGAAAAACAGAATGGTTGTATGGGAACTCGAAGCACTATTTCCACTTCTTGTCCAGGCAGCTaGGTGGGCACCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TESEKQNGCMGTRSTISTSCPGS*VGTSGG
Trigger: GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAGA...AGTGGAAATAGTGCTTCGAGTTCCCATACAACCATTCTGTTTTTCACTTTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp GTTGTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTCTCCGGGATGCTTGGTaGAGCCCCGGGTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: VVWELEALFPLLQNAYLSLRDAW*SPGSTP
Trigger: AGGAGTGGACCCGGGGCTGCACCAAGCATCCCGGAG...AGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp ACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGGAAGCTAGGGGAAACGTGCTTTaGGCTAAGTTCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: TQLTLTWEIPHNHSIREARGNVL*AKFRTL
Trigger: GAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCT...AGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp TGGTTGTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCCCCCGATGCGGCCCTaGAGGTTGTGCTCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: WLYGNSKHYFHFYKMRISPPMRP*RLCSFS
Trigger: CGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGG...AGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp CACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCACTCTTCCGGGGAGGGCTTGAATaGTTCAGCATGAAAATCCCC +
Preference number: 4 (lower is better)
Translates to: HKSVIDAMKGRPGQSPLFRGGLE*FSMKIP
Trigger: GGGGATTTTCATGCTGAACCATTCAAGCCCTCCCCG...GAAGAGTGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CCAACATCTACGTTCCTGAAGAGAAGGTGGGACTCTCAGGTCACACTTCTGCCAGTCCCCGTTATTTTGTaGGGTGGAGAGTTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PTSTFLKRRWDSQVTLLPVPVIL*GGELEE
Trigger: TTCCTCCAACTCTCCACCCCACAAAATAACGGGGAC...TGGCAGAAGTGTGACCTGAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp GACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGACAGTGTTGTACTTTTaGCAGCCTCTGACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: DTIASHERVRSLLCILFRTVLYF*QPLTSP
Trigger: GGGAGAGGTCAGAGGCTGCCAAAAGTACAACACTGT...CCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp GTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGTTTTCTTTGGCAAAATaGAGGATCATGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VFPGGVSAAPGAFHVLSRFSLAK*RIMCLL
Trigger: GAGGAGACACATGATCCTTCATTTTGCCAAAGAAAA...CCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR TCA 90 bp ACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATCAACATCTACGTTCCTaGAGAGAAGGTGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: TNRLRRQVPCFPSPQKCHQHLRS*REGGTL
Trigger: GAGAGTCCCACCTTCTCTTCAGGAACGTAGATGTTG...ATGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp AAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGAGCTTTGAGACATCCTaGAAAGGGTCATTTGGACAA +
Preference number: 4 (lower is better)
Translates to: KKSSGYVLPRAEGRTQAKSFETS*KGSFGQ
Trigger: TTGTCCAAATGACCCTTTTCAGGATGTCTCAAAGCT...CTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCGGCAGGAAAGAAAAGTaGCCTTTGGCACAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: EPASFNFRILPPVWSSQLGRKEK*PLAQAL
Trigger: CAAAGCTTGTGCCAAAGGTCACTTTTCTTTCCTGCC...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp CGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTGTAAGGAGAAAACTTTaGGAAAATGTGACAGACAGT +
Preference number: 4 (lower is better)
Translates to: RKKSSGYVLPRAEGRTQAVRRKL*ENVTDS
Trigger: ACTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTAC...AGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379785.5
CDS-3UTR GCA 90 bp TCTTCCACAGTTAGTAAGGAGAAAACTTTGAGAAAATGTGACAGACAGTTCGTAGCCACCAGGCCCTGCTaGTCGCCTCCTCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: SSTVSKEKTLRKCDRQFVATRPC*SPPLRL
Trigger: AAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGC...TACGAACTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTACTAACTGTGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR GCA 90 bp AGCCTTTCATGTTCTTCCACAGTTAGTAAGGAGAAAACTTTGAGAAAATGTGACCGGCCGGGCGTTTCCTaGGCTGCCAGGGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: SLSCSSTVSKEKTLRKCDRPGVS*AARGNV
Trigger: CACGTTTCCCCTGGCAGCGCAGGAAACGCCCGGCCG...GTCACATTTTCTCAAAGTTTTCTCCTTACTAACTGTGGAAGAACATGAAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR GCA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: LGPFFASCFGNAMTESHAVVHGF*RVAVFV
Trigger: TACAAAGACTGCAACTCGGCAGAAGCCATGGACGAC...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCAGGACACAAGCTAAGCTaGAGAAATGGAAATGGAATG +
Preference number: 4 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSGHKLS*RNGNGM
Trigger: CATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCC...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp TGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTCTCCCATTTCCAAAGGGACACAAGCTAAGCTaGAGAAATGGAAATGGAATG +
Preference number: 4 (lower is better)
Translates to: WRSQRCSGSLSCSLPFPKGHKLS*RNGNGM
Trigger: CATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCC...CTTTGGAAATGGGAGAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414237.5
CDS-3UTR GCA 90 bp AGAAACGAAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCATTAATTTTAGGATTCTaGCACCAGTGTGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RNETKQHSVPSGLLSGPALILGF*HQCGLP
Trigger: GGGAAGACCACACTGGTGGCAGAATCCTAAAATTAA...TGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTTCGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR GCA 90 bp GTATCTCCCTCCCTGTCCAGATTCATGTTACCTCTCTCCCTATCTAGGCCCTTCCAAAATGAAGAGCTTTaGCCGTGGTCTCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: VSPSLSRFMLPLSLSRPFQNEEL*PWSQDR
Trigger: TCTGTCCTGAGACCACGGGCAAAGCTCTTCATTTTG...GAAGGGCCTAGATAGGGAGAGAGGTAACATGAATCTGGACAGGGAGGGAGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp ATGAGGAGAAACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACACAAAATGAAGAGCTTTaGCCGTGGTCTCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: MRRNQQAETTGPMLSITTQNEEL*PWSQDR
Trigger: TCTGTCCTGAGACCACGGGCAAAGCTCTTCATTTTG...TGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGTTTCTCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp AGCATAAGGGAAGCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTATCCAGAGAATGCTCTaGCCTTCAGGGGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SIREASQSPQQLRLIGLFIQRML*PSGGWT
Trigger: AGTCCAGCCCCCTGAAGGGCAGAGCATTCTCTGGAT...AAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGCTTCCCTTATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp AGCATAAGGGAAGCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTTCATTAGGAGCCGCTTaGCGCAGAGCCAGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SIREASQSPQQLRLIGLFSLGAA*RRARKV
Trigger: CACCTTTCTGGCTCTGCGGCAAGCGGCTCCTAATGA...AAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGCTTCCCTTATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp CTTTCAGCAACTAGGAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTAGGGGAAACGTGCTTTaGGCTAAGTTCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: LSATRSLPPLILGFCHQCRGNVL*AKFRTL
Trigger: GAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCT...ACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTCCTAGTTGCTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR CCA 90 bp GTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTGCTGCGAGGCTTTTTGGTaGGTTCGGGGCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: VWELEALFPLLQNAYLSCCEAFW*VRGWLA
Trigger: CGCTAGCCAGCCCCGAACCCACCAAAAAGCCTCGCA...GCAAGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp ACTGAAAGTGAAAAACAGAATGGTTGTATGGGAACTCGAAGCACTATTTCCACTAGGGGGCTGGACTGGTaGCTCAGGGTCCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TESEKQNGCMGTRSTISTRGLDW*LRVPSR
Trigger: CCTGGAAGGGACCCTGAGCCACCAGTCCAGCCCCCT...AGTGGAAATAGTGCTTCGAGTTCCCATACAACCATTCTGTTTTTCACTTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp CTGAAAGTGAAAAACAGAATGGTTGTATGGGAACTCGAAGCACTATTTCCACTTCCCCGGGTCCACTCCTaGATGCCACGGTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: LKVKNRMVVWELEALFPLPRVHS*MPRSPL
Trigger: GAGAGGTGACCGTGGCATCCAGGAGTGGACCCGGGG...AAGTGGAAATAGTGCTTCGAGTTCCCATACAACCATTCTGTTTTTCACTTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp ATACTTACAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCATTTTCTTTGGCAAAATaGAGGATCATGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ILTDRLALAKVVQAAAWAFSLAK*RIMCLL
Trigger: GAGGAGACACATGATCCTTCATTTTGCCAAAGAAAA...TGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTGTAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR TCA 90 bp TCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGTTTTCTTTGGCAAAATaGAGGATCATGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SVFPGGVSAAPGAFHVRQFSLAK*RIMCLL
Trigger: GAGGAGACACATGATCCTTCATTTTGCCAAAGAAAA...CTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR TCA 90 bp CATCACCACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCACTTTGGCACAAGCTTTaGGACATCCTGAAAAGGGTC +
Preference number: 4 (lower is better)
Translates to: HHHKSVIDAMKGRPGQSPLWHKL*DILKRV
Trigger: GACCCTTTTCAGGATGTCTCAAAGCTTGTGCCAAAG...TGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTGGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACACTTTGGCACAAGCTTTaGGACATCCTGAAAAGGGTC +
Preference number: 4 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTLWHKL*DILKRV
Trigger: GACCCTTTTCAGGATGTCTCAAAGCTTGTGCCAAAG...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp CCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTCGGTCTTCTAAGAGAAAGGTCTaGCTAGTACTAGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: PFFASCFGNAMTESHARSSKRKV*LVLAQC
Trigger: ACACTGTGCTAGTACTAGTCAGACCTTTCTCTTAGA...AGACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR GCA 90 bp GGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTGCATCATCACTGGCAAACTTCTTaGCCCGGCTGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GTRSTISTSTKCVSLLHHHWQTS*PGWTGL
Trigger: CAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTG...ATGATGCAAGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp CATCATCCATTGGAGACCTCTGTATTTTACACAACTGACACTGACCTGGGAAATACCTCTCCCGGTGTGTaGAGACGGACTCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: HHPLETSVFYTTDTDLGNTSPGV*RRTPRS
Trigger: TGAACGTGGAGTCCGTCTGCACACACCGGGAGAGGT...ATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAGAGGTCTCCAATGGATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp CCTCTGTATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCGAGGTGGAGGCCACATaGTCCTCAAAGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: PLYFTQLTLTWEIPHNHSEVEAT*SSKLLM
Trigger: CATCAACAGCTTTGAGGAGCATGTGGCCTCCACCTC...GCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp TCCCATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTTAATTTTAGGATTCTaGCACCAGTGTGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SHEASSQVKMHQTVTWRFLILGF*HQCGLP
Trigger: GGGAAGACCACACTGGTGGCAGAATCCTAAAATTAA...AAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp AATGCGTATCTCTCTTGCATCATTGTAAAGTGGAAGTGTCATAAACTACCCATCGGGTCCACTCCTGGATaGCACGGTCACCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NAYLSCIIVKWKCHKLPIGSTPG*HGHLSG
Trigger: CCCAGAGAGGTGACCGTGGCATCCAGGAGTGGACCC...GATGGGTAGTTTATGACACTTCCACTTTACAATGATGCAAGAGAGATACGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp CATAAACTACCCATCATCCATTGGAGACCTCTGTATTTTACACAACTGACACTGTTGGCCCACAGGATCTaGGCAACGAGGGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HKLPIIHWRPLYFTQLTLLAHRI*ATRACG
Trigger: ACCACAGGCCCTCGTTGCCCAGATCCTGTGGGCCAA...CAGTGTCAGTTGTGTAAAATACAGAGGTCTCCAATGGATGATGGGTAGTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp GAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTGCATCATTGCCGGCACAGGTAGATaGTACGCGGCTGCACGTGGA +
Preference number: 4 (lower is better)
Translates to: ELEALFPLLQNAYLSCIIAGTGR*YAAARG
Trigger: TCCACGTGCAGCCGCGTACCATCTACCTGTGCCGGC...AATGATGCAAGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp GTTGTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTATGGTGCTCTTCAGCTaGCTGGTCCACACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VVWELEALFPLLQNAYLSMVLFS*LVHTRR
Trigger: CCTGCGCGTGTGGACCAGCCAGCTGAAGAGCACCAT...AGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp ACTGAAAGTGAAAAACAGAATGGTTGTATGGGAACTCGAAGCACTATTTCCACTAGCGCCTCGGCCGTCTaGATGGTGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TESEKQNGCMGTRSTISTSASAV*MVLFSW
Trigger: CCAGCTGAAGAGCACCATCCAGACGGCCGAGGCGCT...AGTGGAAATAGTGCTTCGAGTTCCCATACAACCATTCTGTTTTTCACTTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp ATGAGGAGAAACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACACGTTATTTTGTGGGGTaGAGAGTTGGAGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: MRRNQQAETTGPMLSITTRYFVG*RVGGIS
Trigger: ACTGATTCCTCCAACTCTCCACCCCACAAAATAACG...TGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGTTTCTCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CCTCTGTATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCCCACGGTCACCTCTCTaGGTATCCAGAGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: PLYFTQLTLTWEIPHNHSPRSPL*VSRECS
Trigger: AGAGCATTCTCTGGATACCCAGAGAGGTGACCGTGG...GCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp AAAACTTTGAGAAAATGTGACAGACAGTTCGTAGACAGGCTTGCCCTAGCAAAGTTCTGCACTCGGCTCTaGGTCAGTTCCAACGGCATC +
Preference number: 4 (lower is better)
Translates to: KTLRKCDRQFVDRLALAKFCTRL*VSSNGI
Trigger: GATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAA...CTTTGCTAGGGCAAGCCTGTCTACGAACTGTCTGTCACATTTTCTCAAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR GCA 90 bp TATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGTTCTGCACTCGGCTCTaGGTCAGTTCCAACGGCATC +
Preference number: 4 (lower is better)
Translates to: YFTQLTLTWEIPHNHSIRFCTRL*VSSNGI
Trigger: GATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAA...CCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp CATAAACTACCCATCATCCATTGGAGACCTCTGTATTTTACACAACTGACACTGGGCACCCAGATCTTCTaGACTCGGCTCTGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: HKLPIIHWRPLYFTQLTLGTQIF*TRLCVS
Trigger: ACTGACGCAGAGCCGAGTGCAGAAGATCTGGGTGCC...CAGTGTCAGTTGTGTAAAATACAGAGGTCTCCAATGGATGATGGGTAGTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp CATCACCACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCACATTTGGACAAACTCTaGTGCCGAGTTTCCAAATGG +
Preference number: 4 (lower is better)
Translates to: HHHKSVIDAMKGRPGQSPHLDKL*CRVSKW
Trigger: CCATTTGGAAACTCGGCAGCAGAGTTTGTCCAAATG...TGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTGGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp CATCATCCATTGGAGACCTCTGTATTTTACACAACTGACACTGACCTGGGAAATGGAGTTGGTCAGCTTTaGCCCACAGGATCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: HHPLETSVFYTTDTDLGNGVGQL*PTGSGQ
Trigger: TTGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCC...ATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAGAGGTCTCCAATGGATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp CTGTATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATAGCTTCCGGACTTTCATaGCTTCCTCATTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LYFTQLTLTWEIPHNHSIASGLS*LPHCRG
Trigger: GCCCCGACAATGAGGAAGCCATGAAAGTCCGGAAGC...TATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp AATGCGTATCTCTCTTGCATCATTGTAAAGTGGAAGTGTCATAAACTACCCATCTACACGATGCGGCTCTaGATGTGGTCCTGCACCCGG +
Preference number: 4 (lower is better)
Translates to: NAYLSCIIVKWKCHKLPIYTMRL*MWSCTR
Trigger: CCGGGTGCAGGACCACATCCAGAGCCGCATCGTGTA...GATGGGTAGTTTATGACACTTCCACTTTACAATGATGCAAGAGAGATACGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp GAACATTGTACTGAAAGTGAAAAACAGAATGGTTGTATGGGAACTCGAAGCACTTGCTCTTCAGCTGGCTaGTCCACACGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EHCTESEKQNGCMGTRSTCSSAG*STRAGP
Trigger: AGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCA...AGTGCTTCGAGTTCCCATACAACCATTCTGTTTTTCACTTTCAGTACAATGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACACGTTATTTTGTGGGGTaGAGAGTTGGAGGAATCAGT +
Preference number: 4 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTRYFVG*RVGGIS
Trigger: ACTGATTCCTCCAACTCTCCACCCCACAAAATAACG...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CCA 90 bp GAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTGCATCATTGAAGCGAGACCAGTCTaGGCTCCGGGATGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ELEALFPLLQNAYLSCIIEARPV*APGCLV
Trigger: CACCAAGCATCCCGGAGCCCAGACTGGTCTCGCTTC...AATGATGCAAGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp GGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACACATTAGCTTTGAGACATCCTaGAAAGGGTCATTTGGACAA +
Preference number: 4 (lower is better)
Translates to: GVFPGQDAPNSHVEVLHISFETS*KGSFGQ
Trigger: TTGTCCAAATGACCCTTTTCAGGATGTCTCAAAGCT...AATGTGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp ACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAATCTAAGAGAAAGGTCTaGCTAGTACTAGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: TIASHERVRSLLCILFRESKRKV*LVLAQC
Trigger: ACACTGTGCTAGTACTAGTCAGACCTTTCTCTTAGA...TTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR TCA 90 bp CTGAAAGTGAAAAACAGAATGGTTGTATGGGAACTCGAAGCACTATTTCCACTTGCAGAGCCAGAAAGGTaGGGAAGCGAGACCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LKVKNRMVVWELEALFPLAEPER*GSETSL
Trigger: CAGACTGGTCTCGCTTCCTCACCTTTCTGGCTCTGC...AAGTGGAAATAGTGCTTCGAGTTCCCATACAACCATTCTGTTTTTCACTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp TATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGTGGCTTCTGCCGAGTTaGAGTCTTTGTAATCCGGGC +
Preference number: 4 (lower is better)
Translates to: YFTQLTLTWEIPHNHSIRWLLPS*SLCNPG
Trigger: GCCCGGATTACAAAGACTGCAACTCGGCAGAAGCCA...CCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp GTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTGCAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: VWELEALFPLLQNAYLSCRSFRF*SSTNLL
Trigger: GAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCT...GCAAGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp CAGAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGGACACAAGCTAAGCTaGAGAAATGGAAATGGAATG +
Preference number: 4 (lower is better)
Translates to: QKWKWNGTDTSASVFPGGGHKLS*RNGNGM
Trigger: CATTCCATTTCCATTTCTGCAGCTTAGCTTGTGTCC...TCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
CDS-3UTR GCA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACATTGGACAAACTCTGCTaGCGAGTTTCCAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTLDKLC*RVSKWF
Trigger: AAACCATTTGGAAACTCGGCAGCAGAGTTTGTCCAA...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp GAATGGTTGTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTGGGTATCCAGAGAATaGTCTGCCCTTCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: EWLYGNSKHYFHFYKMRIWVSRE*SALQGA
Trigger: AGCCCCCTGAAGGGCAGAGCATTCTCTGGATACCCA...GATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAACCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp ACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGGAAGCTTCTCAGAGTGCAGCTCAGGTTAATTaGTCTCTTTCAGCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: TLTWEIPHNHSIREASQSAAQVN*SLSARY
Trigger: ATACCTGGCTGAAAGAGACCAATTAACCTGAGCTGC...ACTCTGAGAAGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACATTTTCTTTGGCAAAATaGAGGATCATGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTFSLAK*RIMCLL
Trigger: GAGGAGACACATGATCCTTCATTTTGCCAAAGAAAA...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR TCA 90 bp GCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTCAGCCAGGTATCTTTTCTTTGGCAAAATaGAGGATCATGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASQSPQQLRLIGLFQPGIFSLAK*RIMCLL
Trigger: GAGGAGACACATGATCCTTCATTTTGCCAAAGAAAA...GATACCTGGCTGAAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp GGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTGCATCATGCTCCTCAAAGCTGTTaGTGCGAGGCTTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GTRSTISTSTKCVSLLHHAPQSC*CEAFWW
Trigger: CCACCAAAAAGCCTCGCATCAACAGCTTTGAGGAGC...ATGATGCAAGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp CTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGTAAGGAGAAAACTTTaGGAAAATGTGACAGACAGT +
Preference number: 4 (lower is better)
Translates to: LLRLMSGLGPFFASCFGNVRRKL*ENVTDS
Trigger: ACTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTAC...GTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR CCA 90 bp AGCCTTTCATGTTCTTCCACAGTTAGTAAGGAGAAAACTTTGAGAAAATGTGACTTAAAGAGTCCGGGCTaGCCGCAGACGCGTACGTCA +
Preference number: 4 (lower is better)
Translates to: SLSCSSTVSKEKTLRKCDLKSPG*PQTRTS
Trigger: TGACGTACGCGTCTGCGGCCAGCCCGGACTCTTTAA...GTCACATTTTCTCAAAGTTTTCTCCTTACTAACTGTGGAAGAACATGAAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR CCA 90 bp TCATGTTCTTCCACAGTTAGTAAGGAGAAAACTTTGAGAAAATGTGACAGACAGTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SCSSTVSKEKTLRKCDRQCLSVS*RSQRCS
Trigger: GGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCA...CTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTACTAACTGTGGAAGAACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR TCA 90 bp ACTGAAAGTGAAAAACAGAATGGTTGTATGGGAACTCGAAGCACTATTTCCACTCCACGTCAATCACCTTaGTCAGCGACAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TESEKQNGCMGTRSTISTPRQSP*SATSPC
Trigger: ACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGG...AGTGGAAATAGTGCTTCGAGTTCCCATACAACCATTCTGTTTTTCACTTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp CATAAACTACCCATCATCCATTGGAGACCTCTGTATTTTACACAACTGACACTGGCAGCTAAGGCACATTaGTTCCGGACTTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: HKLPIIHWRPLYFTQLTLAAKAH*FRTFMA
Trigger: AGCCATGAAAGTCCGGAAGCAATGTGCCTTAGCTGC...CAGTGTCAGTTGTGTAAAATACAGAGGTCTCCAATGGATGATGGGTAGTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp GGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTGCATCATGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: GTRSTISTSTKCVSLLHHVVHGF*RVAVFV
Trigger: TACAAAGACTGCAACTCGGCAGAAGCCATGGACGAC...ATGATGCAAGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp CTTTCAGCAACTAGGAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTTTGGACAAACTCTGCTaGCGAGTTTCCAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: LSATRSLPPLILGFCHQCLDKLC*RVSKWF
Trigger: AAACCATTTGGAAACTCGGCAGCAGAGTTTGTCCAA...ACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTCCTAGTTGCTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR GCA 90 bp CTGACCTGGGAAATCCCACATAACCACAGCATAAGGGAAGCTTCTCAGAGTCCTAATGCGTATCTCTCTTaGATCATTGTAAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LTWEIPHNHSIREASQSPNAYLS*IIVKWK
Trigger: CTTCCACTTTACAATGATGCAAGAGAGATACGCATT...AGGACTCTGAGAAGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp AGCCTTTCATGTTCTTCCACAGTTAGTAAGGAGAAAACTTTGAGAAAATGTGACAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLSCSSTVSKEKTLRKCDRSFRF*SSTNLL
Trigger: GAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCT...GTCACATTTTCTCAAAGTTTTCTCCTTACTAACTGTGGAAGAACATGAAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR GCA 90 bp TCATGTTCTTCCACAGTTAGTAAGGAGAAAACTTTGAGAAAATGTGACAGACAGGCAGCTAAGGCACATTaGTTCCGGACTTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: SCSSTVSKEKTLRKCDRQAAKAH*FRTFMA
Trigger: AGCCATGAAAGTCCGGAAGCAATGTGCCTTAGCTGC...CTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTACTAACTGTGGAAGAACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR CCA 90 bp GAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTGCATCATTCAACTGACACTGACCTaGGAAATCCCACATAACCAC +
Preference number: 4 (lower is better)
Translates to: ELEALFPLLQNAYLSCIIQLTLT*EIPHNH
Trigger: GTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTG...AATGATGCAAGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR TCA 90 bp AAAACTTTGAGAAAATGTGACAGACAGTTCGTAGACAGGCTTGCCCTAGCAAAGTTTTCTTTGGCAAAATaGAGGATCATGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KTLRKCDRQFVDRLALAKFSLAK*RIMCLL
Trigger: GAGGAGACACATGATCCTTCATTTTGCCAAAGAAAA...CTTTGCTAGGGCAAGCCTGTCTACGAACTGTCTGTCACATTTTCTCAAAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR CCA 90 bp CTGTATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATACTACCCATCATCCATTaGAGACCTCTGTATTTTACA +
Preference number: 4 (lower is better)
Translates to: LYFTQLTLTWEIPHNHSILPIIH*RPLYFT
Trigger: TGTAAAATACAGAGGTCTCCAATGGATGATGGGTAG...TATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CCA 90 bp TATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGTGCATCATTGTAAAGTaGAAGTGTCATAAACTACCC +
Preference number: 4 (lower is better)
Translates to: YFTQLTLTWEIPHNHSIRCIIVK*KCHKLP
Trigger: GGGTAGTTTATGACACTTCCACTTTACAATGATGCA...CCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR GCA 90 bp GTTGTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTCCACTTCTACAAAATaGGTATCTCTCTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: VVWELEALFPLLQNAYLSSTSTK*VSLLHH
Trigger: ATGATGCAAGAGAGATACGCATTTTGTAGAAGTGGA...AGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS CCA 90 bp CGGCTGCGCCCGACGGCCCGCCTCCCGGGGCCGAGATCCCGACGCTaGCAGGAGAGCGGCCGCCGACCCCCGGAACAAAGGAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: RLRPTARLPGPRSRR*QESGRRPPEQRRRG
Trigger: CCCTCTCCTCCTTTGTTCCGGGGGTCGGCGGCCGCTCTCCTGCCAGCGTCGGGATCTCGGCCCCGGGAGGCGGGCCGTCGGGCGCAGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 90 bp ATGCTCGGGCGCAGTGACAGCCGCGCTCTCGCCACCAGGCCCTGCTaGTCGCCTCCTCTCCGGCTTGGCTGGGATGCCCCGCGCACCGCC +
Preference number: 5 (lower is better)
Translates to: MLGRSDSRALATRPC*SPPLRLGWDAPRTA
Trigger: GGCGGTGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAGAGCGCGGCTGTCACTGCGCCCGAGCAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
CDS GCA 90 bp GGGATGCTCGGGCGCAGTGACAGCCGCGCTCTCGCCACCAGGCCCTaGTGCTCGCCTCCTCTCCGGCTTGGCTGGGATGCCCCGCGCACC +
Preference number: 5 (lower is better)
Translates to: GMLGRSDSRALATRP*CSPPLRLGWDAPRT
Trigger: GGTGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAGAGCGCGGCTGTCACTGCGCCCGAGCATCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
CDS GCA 90 bp GGGATGCCCGGCACGGCCGGCTCGTCCGCTCGGAAAGCTCTGGGATaGTCGGGCGCAGTGACAGCCGCGCTCTCGCCACCAGGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: GMPGTAGSSARKALG*SGAVTAALSPPGPA
Trigger: AGCAGGGCCTGGTGGCGAGAGCGCGGCTGTCACTGCGCCCGAGCATCCCAGAGCTTTCCGAGCGGACGAGCCGGCCGTGCCGGGCATCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 90 bp GCGCCGGCGCGCGGCCGGGCGTTTCCTGCGCTGCCAGGGGAAACGTaGTTTGGGCTAAGTTCCGGACCCTCGCCTGTGCGGGGCTCGACG +
Preference number: 5 (lower is better)
Translates to: APARGRAFPALPGET*FGLSSGPSPVRGST
Trigger: CGTCGAGCCCCGCACAGGCGAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCCGGCCGCGCGCCGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS TCA 90 bp CGGCCGGCTCGTCCGCTCGGAAAGCTCTGGGATGCTCGGGCGCAGTaGCAGCCGCGCTCTCGCCACCAGGCCCTGCTGCTCGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RPARPLGKLWDARAQ*QPRSRHQALLLASS
Trigger: AGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAGAGCGCGGCTGTCACTGCGCCCGAGCATCCCAGAGCTTTCCGAGCGGACGAGCCGGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 90 bp CGCCACCAGGCCCTGCTGCTCGCCTCCTCTCCGGCTTGGCTGGGATaGCCCGCGCACCGCCGGCTTTTAAAGAGTCCGGGCTGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: RHQALLLASSPAWLG*PAHRRLLKSPGWPQ
Trigger: CTGCGGCCAGCCCGGACTCTTTAAAAGCCGGCGGTGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317350.8
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
CDS GCA 90 bp CTTCTGCACTCGGCTCTGCGTCAGTTCCAACGGCATCTTCGCGGCTaGGCCCGACGGCCCGCCTCCCGGGGCCGAGATCCCGACGCTGGC +
Preference number: 5 (lower is better)
Translates to: LLHSALRQFQRHLRG*ARRPASRGRDPDAG
Trigger: GCCAGCGTCGGGATCTCGGCCCCGGGAGGCGGGCCGTCGGGCGCAGCCGCGAAGATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS CCA 90 bp CCGCGCTCTCGCCACCAGGCCCTGCTGCTCGCCTCCTCTCCGGCTTaGCTGGGATGCCCCGCGCACCGCCGGCTTTTAAAGAGTCCGGGC +
Preference number: 5 (lower is better)
Translates to: PRSRHQALLLASSPA*LGCPAHRRLLKSPG
Trigger: GCCCGGACTCTTTAAAAGCCGGCGGTGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAGAGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317350.8
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
CDS GCA 90 bp CTTTGGGCTAAGTTCCGGACCCTCGCCTGTGCGGGGCTCGACGTGTaGTGCGAGGGTAGCGAGGCTGGGGATGCCCGGCACGGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: LWAKFRTLACAGLDV*CEGSEAGDARHGRL
Trigger: GAGCCGGCCGTGCCGGGCATCCCCAGCCTCGCTACCCTCGCAGCACACGTCGAGCCCCGCACAGGCGAGGGTCCGGAACTTAGCCCAAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS CCA 90 bp GGCGCGCGGCCGGGCGTTTCCTGCGCTGCCAGGGGAAACGTGCTTTaGGCTAAGTTCCGGACCCTCGCCTGTGCGGGGCTCGACGTGTGC +
Preference number: 5 (lower is better)
Translates to: GARPGVSCAARGNVL*AKFRTLACAGLDVC
Trigger: GCACACGTCGAGCCCCGCACAGGCGAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCCGGCCGCGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 90 bp GAGGGCCTGTGGTCCACGGGCACCCAGATCTTCTGCACTCGGCTCTaGGTCAGTTCCAACGGCATCTTCGCGGCTGCGCCCGACGGCCCG +
Preference number: 5 (lower is better)
Translates to: EGLWSTGTQIFCTRL*VSSNGIFAAAPDGP
Trigger: CGGGCCGTCGGGCGCAGCCGCGAAGATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAAGATCTGGGTGCCCGTGGACCACAGGCCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS-3UTR CAA 90 bp GAGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ESGGGGPTAKGRAPGTHVSSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...CACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp GAGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGATGACGGTGGGGGAGTaGGTCAGCTTTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: ESGGGGPTAKGRAPGTHVMTVGE*VSFGPQ
Trigger: CTGTGGGCCAAAGCTGACCAACTCCCCCACCGTCAT...CACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCAGCTGCGAGTGAGGCCTaGCTTGGGCCACTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPAASEA*LGPLSP
Trigger: TGGGGACAGTGGCCCAAGCAAGGCCTCACTCGCAGC...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGGGAGTTGGTCAGCTTaGGCCCACAGGATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKAGSWSA*AHRIWA
Trigger: TGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCCC...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCACTGGCAAACTTCTaGCCCCGGCTGGACAGGCCT +
Preference number: 5 (lower is better)
Translates to: LAKVVQAAAWAPPGAGSWALANF*PRLDRP
Trigger: AGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTGC...CCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CAA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCSSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475881.5
CDS-3UTR CAA 90 bp CAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCGAGTGAGGCCTTGCTaGGGCCACTGTCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: QTVPSMVLFGQGSPAAPPRVRPC*GHCPHL
Trigger: CAGGTGGGGACAGTGGCCCAAGCAAGGCCTCACTCG...GGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS TCA 90 bp CTTGCTCAGAGCACTGGCAAACTTCTTGCCCCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCCCTGGAGGTTGTGCTCGTTCTCGCC +
Preference number: 5 (lower is better)
Translates to: LAQSTGKLLAPAGQA*VAPDAALEVVLVLA
Trigger: GGCGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTGCTCTGAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000536985.6
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS-3UTR CAA 90 bp CAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCGGGAGTTGGTCAGCTTaGGCCCACAGGATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QACPSKGCPGSCVGTSGGGSWSA*AHRIWA
Trigger: TGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCCC...GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CAA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTGGGAGTTGGTCAGCTTaGGCCCACAGGATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCGSWSA*AHRIWA
Trigger: TGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCCC...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCATGACGGTGGGGGAGTaGGTCAGCTTTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: QACPSKGCPGSCVGTSGGMTVGE*VSFGPQ
Trigger: CTGTGGGCCAAAGCTGACCAACTCCCCCACCGTCAT...GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QTVPSMVLFGQGSPAAPPSSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...GGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000450232.1
ENST00000536985.6
CDS-3UTR CAA 90 bp CACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCGAGTGAGGCCTTGCTaGGGCCACTGTCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: HRRCQAWFSSAKAPPLLHRVRPC*GHCPHL
Trigger: CAGGTGGGGACAGTGGCCCAAGCAAGGCCTCACTCG...GTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS GCA 90 bp GATCTGGGCAACGAGGGCCTGTGGTCCACGGGCACCCAGATCTTCTaGACTCGGCTCTGCGTCAGTTCCAACGGCATCTTCGCGGCTGCG +
Preference number: 5 (lower is better)
Translates to: DLGNEGLWSTGTQIF*TRLCVSSNGIFAAA
Trigger: CGCAGCCGCGAAGATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAAGATCTGGGTGCCCGTGGACCACAGGCCCTCGTTGCCCAGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 90 bp AGAAAGGTGAGGAAGCGAGACCAGTCTGGGCTCCGGGATGCTTGGTaGAGCCCCGGGTCCACTCCTGGATGCCACGGTCACCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RKVRKRDQSGLRDAW*SPGSTPGCHGHLSG
Trigger: CCCAGAGAGGTGACCGTGGCATCCAGGAGTGGACCCGGGGCTGCACCAAGCATCCCGGAGCCCAGACTGGTCTCGCTTCCTCACCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS GCA 90 bp CAGAGCCAGAAAGGTGAGGAAGCGAGACCAGTCTGGGCTCCGGGATaGTTGGTGCAGCCCCGGGTCCACTCCTGGATGCCACGGTCACCT +
Preference number: 5 (lower is better)
Translates to: QSQKGEEARPVWAPG*LVQPRVHSWMPRSP
Trigger: AGGTGACCGTGGCATCCAGGAGTGGACCCGGGGCTGCACCAAGCATCCCGGAGCCCAGACTGGTCTCGCTTCCTCACCTTTCTGGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp CAGACAGTTCGTAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGCGCCTCCTCTCCGGCTaGGCTGGGATGCCCCGCGCA +
Preference number: 5 (lower is better)
Translates to: QTVRRQACPSKGCPGSCVRLLSG*AGMPRA
Trigger: TGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGCG...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTACGAACTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR CAA 90 bp GTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCGCCTCCTCTCCGGCTaGGCTGGGATGCCCCGCGCA +
Preference number: 5 (lower is better)
Translates to: VFPGGVSAAPGAFHVLSRRLLSG*AGMPRA
Trigger: TGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGCG...CCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CAA 90 bp ACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCGCACTGGCAAACTTCTaGCCCCGGCTGGACAGGCCT +
Preference number: 5 (lower is better)
Translates to: TDGAKHGSLRPRLPRCSTALANF*PRLDRP
Trigger: AGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTGC...GGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCTGCTCCTCCACGAACTaGCTCAGAGCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGCSSTN*LRALAN
Trigger: GTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCA...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CAA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 5 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LAKVVQAAAWAPPGAGSWLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...CCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CAA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCGCAGCCAGCCTGCCCTaGCACATCTTTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLAASLP*HIFGGR
Trigger: CCTGCCTCCAAAGATGTGCAAGGGCAGGCTGGCTGC...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS CCA 90 bp TTGGTGCAGCCCCGGGTCCACTCCTGGATGCCACGGTCACCTCTCTaGGTATCCAGAGAATGCTCTGCCCTTCAGGGGGCTGGACTGGTG +
Preference number: 5 (lower is better)
Translates to: LVQPRVHSWMPRSPL*VSRECSALQGAGLV
Trigger: CACCAGTCCAGCCCCCTGAAGGGCAGAGCATTCTCTGGATACCCAGAGAGGTGACCGTGGCATCCAGGAGTGGACCCGGGGCTGCACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAACGCCTCCTCTCCGGCTaGGCTGGGATGCCCCGCGCA +
Preference number: 5 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKRLLSG*AGMPRA
Trigger: TGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGCG...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR CAA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGCGCCTCCTCTCCGGCTaGGCTGGGATGCCCCGCGCA +
Preference number: 5 (lower is better)
Translates to: RGDTIASHERVRSLLCILRLLSG*AGMPRA
Trigger: TGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGCG...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAAGTCCCTGTCGCATTaGTCGGGGTCGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PSPEEVLRIRFASGGGQDKSLSH*SGSRGW
Trigger: CCAGCCCCTCGACCCCGACAAATGCGACAGGGACTT...GTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCCCCACGTCAATCACCTaGATCAGCGACAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: QACPSKGCPGSCVGTSGGPTSIT*ISDKSL
Trigger: CAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGG...GCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGTCCATGCGGCCCTGGAGGTaGTGCTCGTTCTCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: QAALEEVAASEALLGPLSMRPWR*CSFSPC
Trigger: GCACGGCGAGAACGAGCACAACCTCCAGGGCCGCAT...GGACAGTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 5 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000475881.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCATCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRASSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CAA 90 bp TTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCGGAGCCTTTCATGTTTaGTCCAGGCAGCTGCGTGGG +
Preference number: 5 (lower is better)
Translates to: FMFCPGSCVGTSGGRQLGGAFHV*SRQLRG
Trigger: CCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCC...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR CAA 90 bp GACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCAGGAGCCTTTCATGTTTaGTCCAGGCAGCTGCGTGGG +
Preference number: 5 (lower is better)
Translates to: DGAKHGSLRPRLPRCSTPGAFHV*SRQLRG
Trigger: CCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCC...TGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS GCA 90 bp GTCCACTCCTGGATGCCACGGTCACCTCTCTGGGTATCCAGAGAATaGTCTGCCCTTCAGGGGGCTGGACTGGTGGCTCAGGGTCCCTTC +
Preference number: 5 (lower is better)
Translates to: VHSWMPRSPLWVSRE*SALQGAGLVAQGPF
Trigger: GAAGGGACCCTGAGCCACCAGTCCAGCCCCCTGAAGGGCAGAGCATTCTCTGGATACCCAGAGAGGTGACCGTGGCATCCAGGAGTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGGAGTTGGTCAGCTTaGGCCCACAGGATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAGSWSA*AHRIWA
Trigger: TGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCCC...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
CDS-3UTR CAA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCATTCATGGCTTCCTCATaGTCGGGGCGGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPFMASS*SGRKKL
Trigger: CAACTTCTTCCGCCCCGACAATGAGGAAGCCATGAA...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp GCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTGTTTCATGGCTTCCTCATaGTCGGGGCGGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: AGSWAGRPRWRPHAPQSCFMASS*SGRKKL
Trigger: CAACTTCTTCCGCCCCGACAATGAGGAAGCCATGAA...ACAGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGTTCATGGCTTCCTCATaGTCGGGGCGGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LAKVVQAAAWAPPGAGSWFMASS*SGRKKL
Trigger: CAACTTCTTCCGCCCCGACAATGAGGAAGCCATGAA...CCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CAA 90 bp AGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGGCATCGAAAACCGCAATTaGTCCCCCTTCTTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: SKGCPGSCVGTSGGRQLGIENRN*SPFFRQ
Trigger: CTGGCGAAAGAAGGGGGACAAATTGCGGTTTTCGAT...GCCCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAAAGTCCCTGTCGCATTaGTCGGGGTCGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTKSLSH*SGSRGW
Trigger: CCAGCCCCTCGACCCCGACAAATGCGACAGGGACTT...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp GAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGAAGTCCCTGTCGCATTaGTCGGGGTCGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: EESALLREPFMFCPGSCVKSLSH*SGSRGW
Trigger: CCAGCCCCTCGACCCCGACAAATGCGACAGGGACTT...CACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CAA 90 bp CTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAATGCGGCCCTGGAGGTaGTGCTCGTTCTCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: LRKKSSGYVLPRAEGRTQMRPWR*CSFSPC
Trigger: GCACGGCGAGAACGAGCACAACCTCCAGGGCCGCAT...TTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGTCCGCACTGGCAAACTTCTaGCCCCGGCTGGACAGGCCT +
Preference number: 5 (lower is better)
Translates to: QAALEEVAASEALLGPLSALANF*PRLDRP
Trigger: AGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTGC...GGACAGTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACGCACTGGCAAACTTCTaGCCCCGGCTGGACAGGCCT +
Preference number: 5 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHALANF*PRLDRP
Trigger: AGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTGC...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CTTTCTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTGCACTGGCAAACTTCTaGCCCCGGCTGGACAGGCCT +
Preference number: 5 (lower is better)
Translates to: LSGVQRPRGHRRCQAWFSALANF*PRLDRP
Trigger: AGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTGC...AGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp AGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACTGGCAAACTTCTaGCCCCGGCTGGACAGGCCT +
Preference number: 5 (lower is better)
Translates to: RSQRCSGSLSCFVQAAAWALANF*PRLDRP
Trigger: AGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTGC...CCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CAA 90 bp ACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: TDGAKHGSLRPRLPRCSTLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...GGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACCACCCAGCCAACTaGCGTCTCAGCTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQDHPAN*RLSSGT
Trigger: AGTCCCTGAGCTGAGACGCAAGTTGGCTGGGTGGTC...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCGCAGCCAGCCTGCCCTaGCACATCTTTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSAASLP*HIFGGR
Trigger: CCTGCCTCCAAAGATGTGCAAGGGCAGGCTGGCTGC...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGACGAGTGAGGCCTTGCTaGGGCCACTGTCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRRVRPC*GHCPHL
Trigger: CAGGTGGGGACAGTGGCCCAAGCAAGGCCTCACTCG...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp AGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCGTGTGCAGGCAGCTCTaGAAGAAGTGGCTGCGAGTG +
Preference number: 5 (lower is better)
Translates to: SGRGDTDGAKHGSLRPRLVCRQL*KKWLRV
Trigger: CACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC...GAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp AGAGTGGAGGTGGGGGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCCTTTGGCACAAGCTTaGAGACATCCTGAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: RVEVGAPRLKAGRQGPTWPLAQA*RHPEKG
Trigger: ACCCTTTTCAGGATGTCTCAAAGCTTGTGCCAAAGG...CCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCCCCCACCTCCACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCTTGTGGGGTGGAGAGTaGGAGGAATCAGTAGACGCC +
Preference number: 5 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSLWGGE*EESVDA
Trigger: GGCGTCTACTGATTCCTCCAACTCTCCACCCCACAA...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GGCCCCACGGCTAAAGGCAGGGCGCCAGGGACCCACGTGGCTTTCTGGTGTCCATTGGTCCCCGTTATTTaGTGGGGTGGAGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: GPTAKGRAPGTHVAFWCPLVPVI*WGGELE
Trigger: CTCCAACTCTCCACCCCACAAAATAACGGGGACCAA...TGGACACCAGAAAGCCACGTGGGTCCCTGGCGCCCTGCCTTTAGCCGTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS GCA 90 bp CTTGGGACTAAACGTGTCCAGCTGACAGAGGAGTGGCAGAGCCCCTaGTTGCTGGCTGTCACCTTCCTTCTGGCCACCCTCCCCCATCTC +
Preference number: 5 (lower is better)
Translates to: LGTKRVQLTEEWQSP*LLAVTFLLATLPHL
Trigger: GAGATGGGGGAGGGTGGCCAGAAGGAAGGTGACAGCCAGCAAGCAGGGGCTCTGCCACTCCTCTGTCAGCTGGACACGTTTAGTCCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536985.6
CDS-3UTR CAA 90 bp GTATCTCCCTCCCTGTCCAGATTCATGTTACCTCTCTCCCTATCTAGGCCCTTCCGCCTCCTCTCCGGCTaGGCTGGGATGCCCCGCGCA +
Preference number: 5 (lower is better)
Translates to: VSPSLSRFMLPLSLSRPFRLLSG*AGMPRA
Trigger: TGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGCG...GAAGGGCCTAGATAGGGAGAGAGGTAACATGAATCTGGACAGGGAGGGAGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360521.7
CDS-3UTR CAA 90 bp GAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGATGACGGTGGGGGAGTaGGTCAGCTTTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: EESALLREPFMFCPGSCVMTVGE*VSFGPQ
Trigger: CTGTGGGCCAAAGCTGACCAACTCCCCCACCGTCAT...CACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CAA 90 bp CTTTCTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTATGACGGTGGGGGAGTaGGTCAGCTTTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: LSGVQRPRGHRRCQAWFSMTVGE*VSFGPQ
Trigger: CTGTGGGCCAAAGCTGACCAACTCCCCCACCGTCAT...AGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAGTCCCTGTCGCATTaGTCGGGGTCGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQKSLSH*SGSRGW
Trigger: CCAGCCCCTCGACCCCGACAAATGCGACAGGGACTT...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCCCCACGTCAATCACCTaGATCAGCGACAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPPTSIT*ISDKSL
Trigger: CAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGG...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp GAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGCTTGCCCTAGCAAAGATGCGGCCCTGGAGGTaGTGCTCGTTCTCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: ESALLREPFMLDRLALAKMRPWR*CSFSPC
Trigger: GCACGGCGAGAACGAGCACAACCTCCAGGGCCGCAT...CTTTGCTAGGGCAAGCCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CAA 90 bp GGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCTGCTCCTCCACGAACTaGCTCAGAGCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: GHRRCQAWFSSAKAPPLLCSSTN*LRALAN
Trigger: GTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCA...GAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp AGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 5 (lower is better)
Translates to: SGRGDTDGAKHGSLRPRLSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...GAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp TCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SSGYVLPRAEGRTQAKLQSSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...CTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CAA 90 bp AGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SPQDTFCLGRRAGHKLSCSSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...GCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CAA 90 bp CAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGTCCGACCACCCAGCCAACTaGCGTCTCAGCTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: QAALEEVAASEALLGPLSDHPAN*RLSSGT
Trigger: AGTCCCTGAGCTGAGACGCAAGTTGGCTGGGTGGTC...GGACAGTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp ACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCTCCCTTGTGGGGTGGAGAGTaGGAGGAATCAGTAGACGCC +
Preference number: 5 (lower is better)
Translates to: TAQCPQRPPVRTSTHHPPLWGGE*EESVDA
Trigger: GGCGTCTACTGATTCCTCCAACTCTCCACCCCACAA...GGGAGGGTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTAGTACTAGCACAGTGTaGTACTTTTGGCAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKASTSTV*YFWQPL
Trigger: CAGAGGCTGCCAAAAGTACAACACTGTGCTAGTACT...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS GCA 90 bp TGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGTTCTCTGACCTCTCCCGGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: WNRHVCLSVSWRSQR*SGSLSCSLTSPGVC
Trigger: GCACACACCGGGAGAGGTCAGAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441697.1
ENST00000450232.1
CDS-3UTR CAA 90 bp CTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCAGGCAGCTGGTTCATGGCTTCCTCATaGTCGGGGCGGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LSCFVQAAAWAPPGAGSWFMASS*SGRKKL
Trigger: CAACTTCTTCCGCCCCGACAATGAGGAAGCCATGAA...CCAGCTGCCTGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CAA 90 bp ACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCCACATCGAAAACCGCAATTaGTCCCCCTTCTTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: TVPSMVLFGQGSPAAPPHIENRN*SPFFRQ
Trigger: CTGGCGAAAGAAGGGGGACAAATTGCGGTTTTCGAT...GTGGGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp GGGCAGGCAGCTGGGCAGGGCGGCCGAGGTGGAGGCCACATGCTCCTCAAAGCTTTAACTTCCATGATATaGGAGGCCACAACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: GQAAGQGGRGGGHMLLKALTSMI*EATTVG
Trigger: CCCTACAGTTGTGGCCTCCAATATCATGGAAGTTAA...AGCTTTGAGGAGCATGTGGCCTCCACCTCGGCCGCCCTGCCCAGCTGCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp AAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGATGCGGCCCTGGAGGTaGTGCTCGTTCTCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: KKSSGYVLPRAEGRTQAKMRPWR*CSFSPC
Trigger: GCACGGCGAGAACGAGCACAACCTCCAGGGCCGCAT...CTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAAATGCGGCCCTGGAGGTaGTGCTCGTTCTCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKMRPWR*CSFSPC
Trigger: GCACGGCGAGAACGAGCACAACCTCCAGGGCCGCAT...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp TCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SASVFPGGVSAAPGAFHVSSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...AACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
CDS-3UTR CAA 90 bp AAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: KSSGYVLPRAEGRTQAKLSSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...CAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000441697.1
ENST00000450232.1
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CAA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACAGTGTGCAGGCAGCTCTaGAAGAAGTGGCTGCGAGTG +
Preference number: 5 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTVCRQL*KKWLRV
Trigger: CACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACAGGCAGGTCACTGGCTaGCAAAGTAGGCAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: HRRCQAWFSSAKAPPLLHRQVTG*QSRQCS
Trigger: AGAACACTGCCTACTTTGCAAGCCAGTGACCTGCCT...GTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS GCA 90 bp GTGCTCTTCAGCTGGCTGGTCCACACGCGCAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTCAGAGCACTGGCAAACTTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: VLFSWLVHTRRSFRF*SSTNLLRALANFLP
Trigger: GGGCAAGAAGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCTGCGCGTGTGGACCAGCCAGCTGAAGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000536985.6
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS-3UTR CAA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAATGACGGTGGGGGAGTaGGTCAGCTTTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLMTVGE*VSFGPQ
Trigger: CTGTGGGCCAAAGCTGACCAACTCCCCCACCGTCAT...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp TCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTATGACGGTGGGGGAGTaGGTCAGCTTTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: SASVFPGGVSAAPGAFHVMTVGE*VSFGPQ
Trigger: CTGTGGGCCAAAGCTGACCAACTCCCCCACCGTCAT...AACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379785.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CCCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCATTCATGGCTTCCTCATaGTCGGGGCGGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PTLSGRSPQDTFCLGRRAFMASS*SGRKKL
Trigger: CAACTTCTTCCGCCCCGACAATGAGGAAGCCATGAA...TGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp AGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCACTCTCTCTAGTAGTATaGGTGGCATCGAAAACCGCA +
Preference number: 5 (lower is better)
Translates to: RLALAKVVQAAAWAPPGALSLVV*VASKTA
Trigger: TGCGGTTTTCGATGCCACCAATACTACTAGAGAGAG...TGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000490474.5
CDS-3UTR CAA 90 bp GCCTTTCATGTTAGACAGGCTTGCCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGAAGTCCCTGTCGCATTaGTCGGGGTCGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: AFHVRQACPSKGCPGSCVKSLSH*SGSRGW
Trigger: CCAGCCCCTCGACCCCGACAAATGCGACAGGGACTT...CACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTAACATGAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CAA 90 bp CTTTCTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTCCCACGTCAATCACCTaGATCAGCGACAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LSGVQRPRGHRRCQAWFSPTSIT*ISDKSL
Trigger: CAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGG...AGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTCGGTCTATGCGGCCCTGGAGGTaGTGCTCGTTCTCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: PFFASCFGNAMTESHARSMRPWR*CSFSPC
Trigger: GCACGGCGAGAACGAGCACAACCTCCAGGGCCGCAT...AGACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTGCTCCTCCACGAACTaGCTCAGAGCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: PEEVLRIRFASGGGQDTSCSSTN*LRALAN
Trigger: GTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCA...GCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACATGCTCCTCCACGAACTaGCTCAGAGCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: PLRKKSSGYVLPRAEGRTCSSTN*LRALAN
Trigger: GTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCA...TGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp GGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 5 (lower is better)
Translates to: GGVSAAPGAFHVLSRQLRSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...ACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR CAA 90 bp AGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 5 (lower is better)
Translates to: RSQRCSGSLSCFVQAAAWSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...CCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR CAA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGATTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CAA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAGACCACCCAGCCAACTaGCGTCTCAGCTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLDHPAN*RLSSGT
Trigger: AGTCCCTGAGCTGAGACGCAAGTTGGCTGGGTGGTC...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAGGAGCCTTTCATGTTTaGTCCAGGCAGCTGCGTGGG +
Preference number: 5 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRGAFHV*SRQLRG
Trigger: CCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCC...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379775.9
ENST00000379789.8
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CAA 90 bp TCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACACCGAAGACAGTGGCCTaGGGACTAAACGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SPEEVLRIRFASGGGQDTPKTVA*GLNVSS
Trigger: GCTGGACACGTTTAGTCCCAAGGCCACTGTCTTCGG...TGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536985.6
CDS-3UTR CAA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGGGGAGTTGGTCAGCTTaGGCCCACAGGATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RGDTIASHERVRSLLCILGSWSA*AHRIWA
Trigger: TGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCCC...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp AGAAACGAAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCAATGACGGTGGGGGAGTaGGTCAGCTTTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: RNETKQHSVPSGLLSGPAMTVGE*VSFGPQ
Trigger: CTGTGGGCCAAAGCTGACCAACTCCCCCACCGTCAT...TGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTTCGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CTTTCTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTTCATGGCTTCCTCATaGTCGGGGCGGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LSGVQRPRGHRRCQAWFSFMASS*SGRKKL
Trigger: CAACTTCTTCCGCCCCGACAATGAGGAAGCCATGAA...AGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp GTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACATCGAAAACCGCAATTaGTCCCCCTTCTTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: VSAAPGAFHVLSRQLRGHIENRN*SPFFRQ
Trigger: CTGGCGAAAGAAGGGGGACAAATTGCGGTTTTCGAT...GTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGAGCAGCGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CAA 90 bp CAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCCTTAACTTCCATGATATaGGAGGCCACAACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: QTVPSMVLFGQGSPAAPPLTSMI*EATTVG
Trigger: CCCTACAGTTGTGGCCTCCAATATCATGGAAGTTAA...GGGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTCGGTCTAAGTCCCTGTCGCATTaGTCGGGGTCGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PFFASCFGNAMTESHARSKSLSH*SGSRGW
Trigger: CCAGCCCCTCGACCCCGACAAATGCGACAGGGACTT...AGACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCATGCGGCCCTGGAGGTaGTGCTCGTTCTCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: EPASFNFRILPPVWSSQLMRPWR*CSFSPC
Trigger: GCACGGCGAGAACGAGCACAACCTCCAGGGCCGCAT...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGATGCGGCCCTGGAGGTaGTGCTCGTTCTCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: DTIASHERVRSLLCILFRMRPWR*CSFSPC
Trigger: GCACGGCGAGAACGAGCACAACCTCCAGGGCCGCAT...CCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTTGCTCCTCCACGAACTaGCTCAGAGCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: RKKSSGYVLPRAEGRTQACSSTN*LRALAN
Trigger: GTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCA...AGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGATGCTCCTCCACGAACTaGCTCAGAGCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: PQDTFCLGRRAGHKLSCRCSSTN*LRALAN
Trigger: GTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCA...TCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 5 (lower is better)
Translates to: LRKKSSGYVLPRAEGRTQSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...TTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CAA 90 bp GCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ASVFPGGVSAAPGAFHVLLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...CAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR CAA 90 bp GAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGCTTGCCCTAGCAAAGTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ESALLREPFMLDRLALAKLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...CTTTGCTAGGGCAAGCCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CAA 90 bp CTTTCTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTAGGCAGGTCACTGGCTaGCAAAGTAGGCAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: LSGVQRPRGHRRCQAWFSRQVTG*QSRQCS
Trigger: AGAACACTGCCTACTTTGCAAGCCAGTGACCTGCCT...AGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACTGTCCTTGGTCCCCGTTATTTaGTGGGGTGGAGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: QAALEEVAASEALLGPLSLVPVI*WGGELE
Trigger: CTCCAACTCTCCACCCCACAAAATAACGGGGACCAA...GGACAGTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp AACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACGGAGCCTTTCATGTTTaGTCCAGGCAGCTGCGTGGG +
Preference number: 5 (lower is better)
Translates to: NKTAQCPQRPPVRTSTHHGAFHV*SRQLRG
Trigger: CCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCC...GTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTTTCATGGCTTCCTCATaGTCGGGGCGGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: RKKSSGYVLPRAEGRTQAFMASS*SGRKKL
Trigger: CAACTTCTTCCGCCCCGACAATGAGGAAGCCATGAA...AGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp GTGTGCAGGCAGCTCTTGAAGAAGTGGCTGCGAGTGAGGCCTTGCTTGGGCCACATCGAAAACCGCAATTaGTCCCCCTTCTTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: VCRQLLKKWLRVRPCLGHIENRN*SPFFRQ
Trigger: CTGGCGAAAGAAGGGGGACAAATTGCGGTTTTCGAT...GTGGCCCAAGCAAGGCCTCACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp TCCGGGAGCCTTTCATGTTTTGTCCAGGCAGCTGCGTGGGCACCTCCGGGGGCATTAACTTCCATGATATaGGAGGCCACAACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: SGSLSCFVQAAAWAPPGALTSMI*EATTVG
Trigger: CCCTACAGTTGTGGCCTCCAATATCATGGAAGTTAA...TGCCCCCGGAGGTGCCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCCCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CAA 90 bp ACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCCCGCTGCTCCACCTTAACTTCCATGATATaGGAGGCCACAACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: TDGAKHGSLRPRLPRCSTLTSMI*EATTVG
Trigger: CCCTACAGTTGTGGCCTCCAATATCATGGAAGTTAA...GGTGGAGCAGCGGGGGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACAAGTCCCTGTCGCATTaGTCGGGGTCGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LLRLMSGLGPFFASCFGNKSLSH*SGSRGW
Trigger: CCAGCCCCTCGACCCCGACAAATGCGACAGGGACTT...GTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCCCACGTCAATCACCTaGATCAGCGACAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PQCFLEESALLREPFMFFPTSIT*ISDKSL
Trigger: CAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGG...GAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CAA 90 bp GCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGCCCACGTCAATCACCTaGATCAGCGACAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: ASVFPGGVSAAPGAFHVLPTSIT*ISDKSL
Trigger: CAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGG...CAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477914.5
CDS-3UTR CAA 90 bp AAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 5 (lower is better)
Translates to: KSSGYVLPRAEGRTQAKLSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...CAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000414237.5
ENST00000475881.5
ENST00000536985.6
CDS-3UTR CAA 90 bp GAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGCTTGCCCTAGCAAAGAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 5 (lower is better)
Translates to: ESALLREPFMLDRLALAKSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...CTTTGCTAGGGCAAGCCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CAA 90 bp TGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTCTCCCATTTCCAAAGTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: WRSQRCSGSLSCSLPFPKLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...CTTTGGAAATGGGAGAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414237.5
CDS-3UTR CAA 90 bp CTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTTTGTCTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LSVSWRSQRCSGSLSCFVLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...GACAAAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000475881.5
ENST00000477914.5
CDS-3UTR CAA 90 bp TCCCATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTGCCCTTGCACATCTTaGGAGGCAGGCCACAGGCCT +
Preference number: 5 (lower is better)
Translates to: SHEASSQVKMHQTVTWRFCPCTS*EAGHRP
Trigger: AGGCCTGTGGCCTGCCTCCAAAGATGTGCAAGGGCA...AAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACAGCTGCGAGTGAGGCCTaGCTTGGGCCACTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTAASEA*LGPLSP
Trigger: TGGGGACAGTGGCCCAAGCAAGGCCTCACTCGCAGC...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCACTCTTCGCTGCGAGTGAGGCCTaGCTTGGGCCACTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: HKSVIDAMKGRPGQSPLFAASEA*LGPLSP
Trigger: TGGGGACAGTGGCCCAAGCAAGGCCTCACTCGCAGC...GAAGAGTGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAATTGGTCCCCGTTATTTaGTGGGGTGGAGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LRKKSSGYVLPRAEGRTQLVPVI*WGGELE
Trigger: CTCCAACTCTCCACCCCACAAAATAACGGGGACCAA...TTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp AATACAACCAAGTTAAGCACAATCATGCACCCGTGCACGTCCACCCCCTACCCAGGGAGTTGGTCAGCTTaGGCCCACAGGATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: NTTKLSTIMHPCTSTPYPGSWSA*AHRIWA
Trigger: TGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCCC...TGGGTAGGGGGTGGACGTGCACGGGTGCATGATTGTGCTTAACTTGGTTGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR CAA 90 bp CAAGCAGCAGCGATGATCGGAGAGATACTTACAGACAGGCTTGCCCTAGCAAAGATGACGGTGGGGGAGTaGGTCAGCTTTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: QAAAMIGEILTDRLALAKMTVGE*VSFGPQ
Trigger: CTGTGGGCCAAAGCTGACCAACTCCCCCACCGTCAT...CTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCTCCGATCATCGCTGCTGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR CAA 90 bp CTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTATTCATGGCTTCCTCATaGTCGGGGCGGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LPQCFLEESALLREPFMLFMASS*SGRKKL
Trigger: CAACTTCTTCCGCCCCGACAATGAGGAAGCCATGAA...TAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CAA 90 bp AACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACTTCATGGCTTCCTCATaGTCGGGGCGGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: NKTAQCPQRPPVRTSTHHFMASS*SGRKKL
Trigger: CAACTTCTTCCGCCCCGACAATGAGGAAGCCATGAA...GTGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACTCTCTCTAGTAGTATaGGTGGCATCGAAAACCGCA +
Preference number: 5 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGLSLVV*VASKTA
Trigger: TGCGGTTTTCGATGCCACCAATACTACTAGAGAGAG...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CATCACCACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCAAAGTCCCTGTCGCATTaGTCGGGGTCGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HHHKSVIDAMKGRPGQSPKSLSH*SGSRGW
Trigger: CCAGCCCCTCGACCCCGACAAATGCGACAGGGACTT...TGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTGGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTAAGTCCCTGTCGCATTaGTCGGGGTCGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: EMEMEWNRHVCLSVSWRSKSLSH*SGSRGW
Trigger: CCAGCCCCTCGACCCCGACAAATGCGACAGGGACTT...ACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR CAA 90 bp AAACAAAACAGCACAGTGTCCCCAGCGGCCTCCTGTCAGGACCAGCACTCATCACCCACGTCAATCACCTaGATCAGCGACAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: KQNSTVSPAASCQDQHSSPTSIT*ISDKSL
Trigger: CAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGG...TGATGAGTGCTGGTCCTGACAGGAGGCCGCTGGGGACACTGTGCTGTTTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp AGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACACCCACGTCAATCACCTaGATCAGCGACAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SVSWRSQRCSGSLSCSSTPTSIT*ISDKSL
Trigger: CAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGG...TGTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CAA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGCACTGGCAAACTTCTaGCCCCGGCTGGACAGGCCT +
Preference number: 5 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFALANF*PRLDRP
Trigger: AGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTGC...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp TCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCATGCTCCTCCACGAACTaGCTCAGAGCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: SVFPGGVSAAPGAFHVLPCSSTN*LRALAN
Trigger: GTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCA...TGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CAA 90 bp TCAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGTGCTCCTCCACGAACTaGCTCAGAGCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: SVFPGGVSAAPGAFHVRQCSSTN*LRALAN
Trigger: GTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCA...CTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CAA 90 bp GGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACACATTTCCTCAGGATACGTTTaGCCTCGGGCGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GVFPGQDAPNSHVEVLHISSGYV*PRAEGR
Trigger: CCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGA...AATGTGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GTATCTCCCTCCCTGTCCAGATTCATGTTACCTCTCTCCCTATCTAGGCCCTTCTGCCCTTGCACATCTTaGGAGGCAGGCCACAGGCCT +
Preference number: 5 (lower is better)
Translates to: VSPSLSRFMLPLSLSRPFCPCTS*EAGHRP
Trigger: AGGCCTGTGGCCTGCCTCCAAAGATGTGCAAGGGCA...GAAGGGCCTAGATAGGGAGAGAGGTAACATGAATCTGGACAGGGAGGGAGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp AATACAACCAAGTTAAGCACAATCATGCACCCGTGCACGTCCACCCCCTACCCATGCCCTTGCACATCTTaGGAGGCAGGCCACAGGCCT +
Preference number: 5 (lower is better)
Translates to: NTTKLSTIMHPCTSTPYPCPCTS*EAGHRP
Trigger: AGGCCTGTGGCCTGCCTCCAAAGATGTGCAAGGGCA...TGGGTAGGGGGTGGACGTGCACGGGTGCATGATTGTGCTTAACTTGGTTGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACAGCAGCCAGCCTGCCCTaGCACATCTTTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTAASLP*HIFGGR
Trigger: CCTGCCTCCAAAGATGTGCAAGGGCAGGCTGGCTGC...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGCTTGCCCTAGTACTAGCACAGTGTaGTACTTTTGGCAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PGGVSAAPGAFHVRQACPSTSTV*YFWQPL
Trigger: CAGAGGCTGCCAAAAGTACAACACTGTGCTAGTACT...AGGGCAAGCCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS CCA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTaGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTCTGACC +
Preference number: 5 (lower is better)
Translates to: EMEMEWNRHVCLSVS*RSQRCSGSLSCSLT
Trigger: GGTCAGAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441697.1
ENST00000450232.1
CDS-3UTR CAA 90 bp AACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCAGGGAGTTGGTCAGCTTaGGCCCACAGGATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: NQQAETTGPMLSITTKVSGSWSA*AHRIWA
Trigger: TGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCCC...TGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379775.9
CDS-3UTR CAA 90 bp CACAAAAGTGTCATAGACGCCATGAAGGGAAGGCCAGGACAAAGTCCACTCTTCATGACGGTGGGGGAGTaGGTCAGCTTTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: HKSVIDAMKGRPGQSPLFMTVGE*VSFGPQ
Trigger: CTGTGGGCCAAAGCTGACCAACTCCCCCACCGTCAT...GAAGAGTGGACTTTGTCCTGGCCTTCCCTTCATGGCGTCTATGACACTTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTCTTCCACATCGAAAACCGCAATTaGTCCCCCTTCTTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: QCFLEESALLREPFMFFHIENRN*SPFFRQ
Trigger: CTGGCGAAAGAAGGGGGACAAATTGCGGTTTTCGAT...GTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379785.5
ENST00000467491.5
CDS-3UTR CAA 90 bp GGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAATCGAAAACCGCAATTaGTCCCCCTTCTTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: GRSPQDTFCLGRRAGHKLIENRN*SPFFRQ
Trigger: CTGGCGAAAGAAGGGGGACAAATTGCGGTTTTCGAT...TAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp TCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTCTCTCTAGTAGTATaGGTGGCATCGAAAACCGCA +
Preference number: 5 (lower is better)
Translates to: SGRSPQDTFCLGRRAGHKLSLVV*VASKTA
Trigger: TGCGGTTTTCGATGCCACCAATACTACTAGAGAGAG...CTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp ACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGATTAACTTCCATGATATaGGAGGCCACAACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: TLSGRSPQDTFCLGRRAGLTSMI*EATTVG
Trigger: CCCTACAGTTGTGGCCTCCAATATCATGGAAGTTAA...TCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACTTAACTTCCATGATATaGGAGGCCACAACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHLTSMI*EATTVG
Trigger: CCCTACAGTTGTGGCCTCCAATATCATGGAAGTTAA...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: EPASFNFRILPPVWSSQLLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp ATGAGGAGAAACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACATTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: MRRNQQAETTGPMLSITTLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...TGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGTTTCTCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTCCTTTGGCACAAGCTTaGAGACATCCTGAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: RKKSSGYVLPRAEGRTQAPLAQA*RHPEKG
Trigger: ACCCTTTTCAGGATGTCTCAAAGCTTGTGCCAAAGG...AGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCCAAGGCTCCCTCTACAGCTTTCTATaGTTTAGGCTCCTTATACAT +
Preference number: 5 (lower is better)
Translates to: AAEGTQTVPSMVLFGQGSLYSFL*FRLLIH
Trigger: ATGTATAAGGAGCCTAAACAATAGAAAGCTGTAGAG...GGAGCCTTGGCCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGCACAGTGTTGTACTTTaGGCAGCCTCTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: RGDTIASHERVRSLLCILHSVVL*AASDLS
Trigger: GGAGAGGTCAGAGGCTGCCAAAAGTACAACACTGTG...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS GCA 90 bp TGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTCAGCGCTaGTCCGGGAGCCTTTCATGTTCTTCCACAGTTAGTAAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: WNRHVCLSVSWRSQR*SGSLSCSSTVSKEK
Trigger: TTTCTCCTTACTAACTGTGGAAGAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379785.5
CDS-3UTR CAA 90 bp CAGCATAAGGGAAGCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTGGGAGTTGGTCAGCTTaGGCCCACAGGATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QHKGSFSESSAAQVNWSLGSWSA*AHRIWA
Trigger: TGCCCAGATCCTGTGGGCCAAAGCTGACCAACTCCC...AAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGCTTCCCTTATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp ACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGGAAGCTTCTCAGAGTATGACGGTGGGGGAGTaGGTCAGCTTTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: TLTWEIPHNHSIREASQSMTVGE*VSFGPQ
Trigger: CTGTGGGCCAAAGCTGACCAACTCCCCCACCGTCAT...ACTCTGAGAAGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp CAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGCTCTCTCTAGTAGTATaGGTGGCATCGAAAACCGCA +
Preference number: 5 (lower is better)
Translates to: QCFLEESALLREPFMLDRLSLVV*VASKTA
Trigger: TGCGGTTTTCGATGCCACCAATACTACTAGAGAGAG...CCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CAA 90 bp CGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTTTAACTTCCATGATATaGGAGGCCACAACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: RKKSSGYVLPRAEGRTQALTSMI*EATTVG
Trigger: CCCTACAGTTGTGGCCTCCAATATCATGGAAGTTAA...AGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp GTATCTCCCTCCCTGTCCAGATTCATGTTACCTCTCTCCCTATCTAGGCCCTTCCCCACGTCAATCACCTaGATCAGCGACAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VSPSLSRFMLPLSLSRPFPTSIT*ISDKSL
Trigger: CAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGG...GAAGGGCCTAGATAGGGAGAGAGGTAACATGAATCTGGACAGGGAGGGAGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CAAGCAGCAGCGATGATCGGAGAGATACTTACAGACAGGCTTGCCCTAGCAAAGCCCACGTCAATCACCTaGATCAGCGACAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: QAAAMIGEILTDRLALAKPTSIT*ISDKSL
Trigger: CAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGG...CTTTGCTAGGGCAAGCCTGTCTGTAAGTATCTCTCCGATCATCGCTGCTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461744.5
CDS-3UTR CAA 90 bp TTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LGPFFASCFGNAMTESHALMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...AGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp ACCAACAGGCTGAGACGACAGGTCCCATGCTTTCCATCACCACAAAAGTGTCATGTGTGCAGGCAGCTCTaGAAGAAGTGGCTGCGAGTG +
Preference number: 5 (lower is better)
Translates to: TNRLRRQVPCFPSPQKCHVCRQL*KKWLRV
Trigger: CACTCGCAGCCACTTCTTCAAGAGCTGCCTGCACAC...ATGACACTTTTGTGGTGATGGAAAGCATGGGACCTGTCGTCTCAGCCTGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCTTGTGGGGTGGAGAGTaGGAGGAATCAGTAGACGCC +
Preference number: 5 (lower is better)
Translates to: EPASFNFRILPPVWSSQLLWGGE*EESVDA
Trigger: GGCGTCTACTGATTCCTCCAACTCTCCACCCCACAA...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CTGGTGTCCAGCGGCCGAGGGGACACAGACGGTGCCAAGCATGGTTCTCTTCGGCTCTACAGCTTTCTATaGTTTAGGCTCCTTATACAT +
Preference number: 5 (lower is better)
Translates to: LVSSGRGDTDGAKHGSLRLYSFL*FRLLIH
Trigger: ATGTATAAGGAGCCTAAACAATAGAAAGCTGTAGAG...CCGAAGAGAACCATGCTTGGCACCGTCTGTGTCCCCTCGGCCGCTGGACACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTGGAGCCTTTCATGTTTaGTCCAGGCAGCTGCGTGGG +
Preference number: 5 (lower is better)
Translates to: EMEMEWNRHVCLSVSWRSGAFHV*SRQLRG
Trigger: CCCACGCAGCTGCCTGGACAAAACATGAAAGGCTCC...ACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475881.5
CDS-3UTR CAA 90 bp TCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACCACAGTGTTGTACTTTaGGCAGCCTCTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: SHERVRSLLCILFRERHDHSVVL*AASDLS
Trigger: GGAGAGGTCAGAGGCTGCCAAAAGTACAACACTGTG...GTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACAGAAAGTCACGCTCGGTCTCACAGTGTTGTACTTTaGGCAGCCTCTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: PFFASCFGNAMTESHARSHSVVL*AASDLS
Trigger: GGAGAGGTCAGAGGCTGCCAAAAGTACAACACTGTG...AGACCGAGCGTGACTTTCTGTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp TCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACAAGCTAAGCTGCAGAAACTCTCTCTAGTAGTATaGGTGGCATCGAAAACCGCA +
Preference number: 5 (lower is better)
Translates to: SGYVLPRAEGRTQAKLQKLSLVV*VASKTA
Trigger: TGCGGTTTTCGATGCCACCAATACTACTAGAGAGAG...TTTCTGCAGCTTAGCTTGTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000536985.6
CDS-3UTR CAA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGCTCTCTCTAGTAGTATaGGTGGCATCGAAAACCGCA +
Preference number: 5 (lower is better)
Translates to: RGDTIASHERVRSLLCILLSLVV*VASKTA
Trigger: TGCGGTTTTCGATGCCACCAATACTACTAGAGAGAG...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp CAGTGTTTCCTGGAGGAGTCAGCGCTGCTCCGGGAGCCTTTCATGTTAGACAGGTTAACTTCCATGATATaGGAGGCCACAACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: QCFLEESALLREPFMLDRLTSMI*EATTVG
Trigger: CCCTACAGTTGTGGCCTCCAATATCATGGAAGTTAA...CCTGTCTAACATGAAAGGCTCCCGGAGCAGCGCTGACTCCTCCAGGAAACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490474.5
CDS-3UTR CAA 90 bp AAGGGAAGCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTCAGCCCCCACGTCAATCACCTaGATCAGCGACAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: KGSFSESSAAQVNWSLSAPTSIT*ISDKSL
Trigger: CAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGG...GGCTGAAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGCTTCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp AAACTACCCATCATCCATTGGAGACCTCTGTATTTTACACAACTGACACTGACCATGCGGCCCTGGAGGTaGTGCTCGTTCTCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: KLPIIHWRPLYFTQLTLTMRPWR*CSFSPC
Trigger: GCACGGCGAGAACGAGCACAACCTCCAGGGCCGCAT...GGTCAGTGTCAGTTGTGTAAAATACAGAGGTCTCCAATGGATGATGGGTAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCTGCTCCTCCACGAACTaGCTCAGAGCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFCSSTN*LRALAN
Trigger: GTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCA...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 5 (lower is better)
Translates to: EMEMEWNRHVCLSVSWRSSGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...ACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360521.7
ENST00000379785.5
ENST00000414237.5
ENST00000475881.5
CDS-3UTR CAA 90 bp AAGGGAAGCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTCAGCCAGCGGGGTGACACTATaGCGTCTCATGAGCGGGTTA +
Preference number: 5 (lower is better)
Translates to: KGSFSESSAAQVNWSLSASGVTL*RLMSGL
Trigger: TAACCCGCTCATGAGACGCAATAGTGTCACCCCGCT...GGCTGAAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGCTTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp CCACCCTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGAGTAAGGAGAAAACTTaGAGAAAATGTGACAGACAG +
Preference number: 5 (lower is better)
Translates to: PPSPEEVLRIRFASGGGQSKEKT*RKCDRQ
Trigger: CTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTACT...CTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379785.5
CDS-3UTR CAA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACAAGGCAGGTCACTGGCTaGCAAAGTAGGCAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTRQVTG*QSRQCS
Trigger: AGAACACTGCCTACTTTGCAAGCCAGTGACCTGCCT...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp CTCTCCGGAAGAAGTCCTCAGGATACGTTTTGCCTCGGGCGGAGGGCAGGACACCTCTACAGCTTTCTATaGTTTAGGCTCCTTATACAT +
Preference number: 5 (lower is better)
Translates to: LSGRSPQDTFCLGRRAGHLYSFL*FRLLIH
Trigger: ATGTATAAGGAGCCTAAACAATAGAAAGCTGTAGAG...GTGTCCTGCCCTCCGCCCGAGGCAAAACGTATCCTGAGGACTTCTTCCGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp ACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGGAAGCTTTCATGGCTTCCTCATaGTCGGGGCGGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TQLTLTWEIPHNHSIREAFMASS*SGRKKL
Trigger: CAACTTCTTCCGCCCCGACAATGAGGAAGCCATGAA...AGCTTCCCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp GAAATGGAAATGGAATGGAACCGACACGTCTGCCTCAGTGTTTCCTGGAGGAGTATCGAAAACCGCAATTaGTCCCCCTTCTTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: EMEMEWNRHVCLSVSWRSIENRN*SPFFRQ
Trigger: CTGGCGAAAGAAGGGGGACAAATTGCGGTTTTCGAT...ACTCCTCCAGGAAACACTGAGGCAGACGTGTCGGTTCCATTCCATTTCCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360521.7
ENST00000379785.5
CDS-3UTR CAA 90 bp ATGAGGCGTCTTCCCAGGTCAAGATGCACCAAACAGTCACGTGGAGGTTTTACAATCGAAAACCGCAATTaGTCCCCCTTCTTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: MRRLPRSRCTKQSRGGFTIENRN*SPFFRQ
Trigger: CTGGCGAAAGAAGGGGGACAAATTGCGGTTTTCGAT...TGTAAAACCTCCACGTGACTGTTTGGTGCATCTTGACCTGGGAAGACGCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp GTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCATCGAAAACCGCAATTaGTCCCCCTTCTTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: VTLLRLMSGLGPFFASCFIENRN*SPFFRQ
Trigger: CTGGCGAAAGAAGGGGGACAAATTGCGGTTTTCGAT...GAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCTCTCTCTAGTAGTATaGGTGGCATCGAAAACCGCA +
Preference number: 5 (lower is better)
Translates to: EPASFNFRILPPVWSSQLLSLVV*VASKTA
Trigger: TGCGGTTTTCGATGCCACCAATACTACTAGAGAGAG...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp TCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAACGCCATGACTTAACTTCCATGATATaGGAGGCCACAACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: SHERVRSLLCILFRERHDLTSMI*EATTVG
Trigger: CCCTACAGTTGTGGCCTCCAATATCATGGAAGTTAA...GTCATGGCGTTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS-3UTR CAA 90 bp GTTGTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTAAGTCCCTGTCGCATTaGTCGGGGTCGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: VVWELEALFPLLQNAYLSKSLSH*SGSRGW
Trigger: CCAGCCCCTCGACCCCGACAAATGCGACAGGGACTT...AGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp TGGTTGTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTGCACTGGCAAACTTCTaGCCCCGGCTGGACAGGCCT +
Preference number: 5 (lower is better)
Translates to: WLYGNSKHYFHFYKMRISALANF*PRLDRP
Trigger: AGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTGC...AGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp GAGCCTGCCTCCTTTAATTTTAGGATTCTGCCACCAGTGTGGTCTTCCCAGCTCCCTTTGGCACAAGCTTaGAGACATCCTGAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: EPASFNFRILPPVWSSQLPLAQA*RHPEKG
Trigger: ACCCTTTTCAGGATGTCTCAAAGCTTGTGCCAAAGG...GAGCTGGGAAGACCACACTGGTGGCAGAATCCTAAAATTAAAGGAGGCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360521.7
ENST00000379775.9
ENST00000379789.8
CDS-3UTR CAA 90 bp AAGGGAAGCTTCTCAGAGTCCTCAGCAGCTCAGGTTAATTGGTCTCTTTCAGCCCTCTCTCTAGTAGTATaGGTGGCATCGAAAACCGCA +
Preference number: 5 (lower is better)
Translates to: KGSFSESSAAQVNWSLSALSLVV*VASKTA
Trigger: TGCGGTTTTCGATGCCACCAATACTACTAGAGAGAG...GGCTGAAAGAGACCAATTAACCTGAGCTGCTGAGGACTCTGAGAAGCTTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp ACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGTTTCGGGAAAGTACTAGCACAGTGTaGTACTTTTGGCAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: TIASHERVRSLLCILFRESTSTV*YFWQPL
Trigger: CAGAGGCTGCCAAAAGTACAACACTGTGCTAGTACT...TTCCCGAAACAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
CDS GCA 90 bp GGCTTCATAGCAACTGATCCTCTTCATGAAGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTAATCCGGGCTGGAGATTTTAACTTC +
Preference number: 5 (lower is better)
Translates to: GFIATDPLHEVVHGF*RVAVFVIRAGDFNF
Trigger: GAAGTTAAAATCTCCAGCCCGGATTACAAAGACTGCAACTCGGCAGAAGCCATGGACGACTTCATGAAGAGGATCAGTTGCTATGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000536985.6
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS-3UTR CAA 90 bp GTTGTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTTGATGCGAGGCTTTTaGGTGGGTTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: VVWELEALFPLLQNAYLSLMRGF*VGSGLA
Trigger: AGCCAGCCCCGAACCCACCAAAAAGCCTCGCATCAA...AGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp CGGGGTGACACTATTGCGTCTCATGAGCGGGTTAGGTCCCTTCTTTGCATCCTGAGTAAGGAGAAAACTTaGAGAAAATGTGACAGACAG +
Preference number: 5 (lower is better)
Translates to: RGDTIASHERVRSLLCILSKEKT*RKCDRQ
Trigger: CTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTACT...CAGGATGCAAAGAAGGGACCTAACCCGCTCATGAGACGCAATAGTGTCACCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR CAA 90 bp TATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATAAGGATCATTAGGAGCCGCTaGCCGCAGAGCCAGAAAGGT +
Preference number: 5 (lower is better)
Translates to: YFTQLTLTWEIPHNHSIRIIRSR*PQSQKG
Trigger: ACCTTTCTGGCTCTGCGGCAAGCGGCTCCTAATGAT...CCTTATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp AAAACTTTGAGAAAATGTGACAGACAGTTCGTAGACAGGCTTGCCCTAGCAAAGCACAGTGTTGTACTTTaGGCAGCCTCTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: KTLRKCDRQFVDRLALAKHSVVL*AASDLS
Trigger: GGAGAGGTCAGAGGCTGCCAAAAGTACAACACTGTG...CTTTGCTAGGGCAAGCCTGTCTACGAACTGTCTGTCACATTTTCTCAAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS-3UTR CAA 90 bp CTGTATTTTACACAACTGACACTGACCTGGGAAATCCCACATAACCACAGCATAATCGAAAACCGCAATTaGTCCCCCTTCTTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: LYFTQLTLTWEIPHNHSIIENRN*SPFFRQ
Trigger: CTGGCGAAAGAAGGGGGACAAATTGCGGTTTTCGAT...TATGCTGTGGTTATGTGGGATTTCCCAGGTCAGTGTCAGTTGTGTAAAATACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp GAACATTGTACTGAAAGTGAAAAACAGAATGGTTGTATGGGAACTCGAAGCACTTGCTCCTCCACGAACTaGCTCAGAGCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: EHCTESEKQNGCMGTRSTCSSTN*LRALAN
Trigger: GTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCA...AGTGCTTCGAGTTCCCATACAACCATTCTGTTTTTCACTTTCAGTACAATGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp GTTGTATGGGAACTCGAAGCACTATTTCCACTTCTACAAAATGCGTATCTCTCTTTAACTTCCATGATATaGGAGGCCACAACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: VVWELEALFPLLQNAYLSLTSMI*EATTVG
Trigger: CCCTACAGTTGTGGCCTCCAATATCATGGAAGTTAA...AGAGAGATACGCATTTTGTAGAAGTGGAAATAGTGCTTCGAGTTCCCATACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS-3UTR CAA 90 bp TCTTCCACAGTTAGTAAGGAGAAAACTTTGAGAAAATGTGACAGACAGTTCGTACTCTCTCTAGTAGTATaGGTGGCATCGAAAACCGCA +
Preference number: 5 (lower is better)
Translates to: SSTVSKEKTLRKCDRQFVLSLVV*VASKTA
Trigger: TGCGGTTTTCGATGCCACCAATACTACTAGAGAGAG...TACGAACTGTCTGTCACATTTTCTCAAAGTTTTCTCCTTACTAACTGTGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467491.5
CDS CCA 72 bp CCGACGGCCCGCCTCCCGGGGCCGAGATCCCGACGCTaGCAGGAGAGCGGCCGCCGACCCCCGGAACAAAGG +
Preference number: 6 (lower is better)
Translates to: PTARLPGPRSRR*QESGRRPPEQR
Trigger: CCTTTGTTCCGGGGGTCGGCGGCCGCTCTCCTGCCAGCGTCGGGATCTCGGCCCCGGGAGGCGGGCCGTCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS CAA 90 bp GCCGCGCTCTCGCCACCAGGCCCTGCTGCTCGCCTCCTCTCCGGCTaGGCTGGGATGCCCCGCGCACCGCCGGCTTTTAAAGAGTCCGGG +
Preference number: 6 (lower is better)
Translates to: AALSPPGPAARLLSG*AGMPRAPPAFKESG
Trigger: CCCGGACTCTTTAAAAGCCGGCGGTGCGCGGGGCATCCCAGCCAAGCCGGAGAGGAGGCGAGCAGCAGGGCCTGGTGGCGAGAGCGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000317350.8
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
CDS TCA 72 bp CGTCCGCTCGGAAAGCTCTGGGATGCTCGGGCGCAGTaGCAGCCGCGCTCTCGCCACCAGGCCCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: RPLGKLWDARAQ*QPRSRHQALLL
Trigger: GAGCAGCAGGGCCTGGTGGCGAGAGCGCGGCTGTCACTGCGCCCGAGCATCCCAGAGCTTTCCGAGCGGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 72 bp AAGTTCCGGACCCTCGCCTGTGCGGGGCTCGACGTGTaGTGCGAGGGTAGCGAGGCTGGGGATGCCCGGCAC +
Preference number: 6 (lower is better)
Translates to: KFRTLACAGLDV*CEGSEAGDARH
Trigger: GTGCCGGGCATCCCCAGCCTCGCTACCCTCGCAGCACACGTCGAGCCCCGCACAGGCGAGGGTCCGGAACTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 72 bp TCTTGCCCCGGCTGGACAGGCCTGAGTCGCCCCCGATaGGGCCCTGGAGGTTGTGCTCGTTCTCGCCGTGCC +
Preference number: 6 (lower is better)
Translates to: SCPGWTGLSRPR*GPGGCARSRRA
Trigger: GGCACGGCGAGAACGAGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000536985.6
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 72 bp CGCGGCCGGGCGTTTCCTGCGCTGCCAGGGGAAACGTaGTTTGGGCTAAGTTCCGGACCCTCGCCTGTGCGG +
Preference number: 6 (lower is better)
Translates to: RGRAFPALPGET*FGLSSGPSPVR
Trigger: CCGCACAGGCGAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCCGGCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS CCA 72 bp CCGGGCGTTTCCTGCGCTGCCAGGGGAAACGTGCTTTaGGCTAAGTTCCGGACCCTCGCCTGTGCGGGGCTC +
Preference number: 6 (lower is better)
Translates to: PGVSCAARGNVL*AKFRTLACAGL
Trigger: GAGCCCCGCACAGGCGAGGGTCCGGAACTTAGCCCAAAGCACGTTTCCCCTGGCAGCGCAGGAAACGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS TCA 72 bp AGCACTGGCAAACTTCTTGCCCCGGCTGGACAGGCCTaGGTCGCCCCCGATGCGGCCCTGGAGGTTGTGCTC +
Preference number: 6 (lower is better)
Translates to: STGKLLAPAGQA*VAPDAALEVVL
Trigger: GAGCACAACCTCCAGGGCCGCATCGGGGGCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGTTTGCCAGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000536985.6
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 72 bp AGGAAGCGAGACCAGTCTGGGCTCCGGGATGCTTGGTaGAGCCCCGGGTCCACTCCTGGATGCCACGGTCAC +
Preference number: 6 (lower is better)
Translates to: RKRDQSGLRDAW*SPGSTPGCHGH
Trigger: GTGACCGTGGCATCCAGGAGTGGACCCGGGGCTGCACCAAGCATCCCGGAGCCCAGACTGGTCTCGCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS GCA 72 bp TGGTCCACGGGCACCCAGATCTTCTGCACTCGGCTCTaGGTCAGTTCCAACGGCATCTTCGCGGCTGCGCCC +
Preference number: 6 (lower is better)
Translates to: WSTGTQIFCTRL*VSSNGIFAAAP
Trigger: GGGCGCAGCCGCGAAGATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAAGATCTGGGTGCCCGTGGACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 72 bp GGGCACTCGGGAGGGGCTCTGCCGCTGGCCACAGACTaGATCAGACCGGCCAGAGAGCCACGCAAAATCAAT +
Preference number: 6 (lower is better)
Translates to: GHSGGALPLATD*IRPAREPRKIN
Trigger: ATTGATTTTGCGTGGCTCTCTGGCCGGTCTGATGCAGTCTGTGGCCAGCGGCAGAGCCCCTCCCGAGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487989.1
CDS CCA 72 bp AGCTTTGGCCCACAGGATCTGGGCAACGAGGGCCTGTaGTCCACGGGCACCCAGATCTTCTGCACTCGGCTC +
Preference number: 6 (lower is better)
Translates to: SFGPQDLGNEGL*STGTQIFCTRL
Trigger: GAGCCGAGTGCAGAAGATCTGGGTGCCCGTGGACCACAGGCCCTCGTTGCCCAGATCCTGTGGGCCAAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS CCA 72 bp CCCCGGGTCCACTCCTGGATGCCACGGTCACCTCTCTaGGTATCCAGAGAATGCTCTGCCCTTCAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: PRVHSWMPRSPL*VSRECSALQGA
Trigger: AGCCCCCTGAAGGGCAGAGCATTCTCTGGATACCCAGAGAGGTGACCGTGGCATCCAGGAGTGGACCCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS GCA 72 bp AACGAGGGCCTGTGGTCCACGGGCACCCAGATCTTCTaGACTCGGCTCTGCGTCAGTTCCAACGGCATCTTC +
Preference number: 6 (lower is better)
Translates to: NEGLWSTGTQIF*TRLCVSSNGIF
Trigger: GAAGATGCCGTTGGAACTGACGCAGAGCCGAGTGCAGAAGATCTGGGTGCCCGTGGACCACAGGCCCTCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 72 bp CGCGCAGGTCCTTCAGGTTCTGCTCCTCCACGAACTTaGTCAGAGCACTGGCAAACTTCTTGCCCCGGCTGG +
Preference number: 6 (lower is better)
Translates to: RAGPSGSAPPRT*SEHWQTSCPGW
Trigger: CCAGCCGGGGCAAGAAGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCTGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000536985.6
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS GCA 72 bp AAACGTGTCCAGCTGACAGAGGAGTGGCAGAGCCCCTaGTTGCTGGCTGTCACCTTCCTTCTGGCCACCCTC +
Preference number: 6 (lower is better)
Translates to: KRVQLTEEWQSP*LLAVTFLLATL
Trigger: GAGGGTGGCCAGAAGGAAGGTGACAGCCAGCAAGCAGGGGCTCTGCCACTCCTCTGTCAGCTGGACACGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536985.6
CDS GCA 72 bp TGGATGCCACGGTCACCTCTCTGGGTATCCAGAGAATaGTCTGCCCTTCAGGGGGCTGGACTGGTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: WMPRSPLWVSRE*SALQGAGLVAQ
Trigger: CTGAGCCACCAGTCCAGCCCCCTGAAGGGCAGAGCATTCTCTGGATACCCAGAGAGGTGACCGTGGCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS GCA 72 bp AGCTGGCTGGTCCACACGCGCAGGTCCTTCAGGTTCTaGTCCTCCACGAACTTGCTCAGAGCACTGGCAAAC +
Preference number: 6 (lower is better)
Translates to: SWLVHTRRSFRF*SSTNLLRALAN
Trigger: GTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCTGCGCGTGTGGACCAGCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000536985.6
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS CAA 72 bp CGGTTCACCAGGAACCTCCGGCCCACGTCAATCACCTaGATCAGCGACAAGTCCCTGTCGCATTTGTCGGGG +
Preference number: 6 (lower is better)
Translates to: RFTRNLRPTSIT*ISDKSLSHLSG
Trigger: CCCCGACAAATGCGACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGGCCGGAGGTTCCTGGTGAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000536985.6
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS CAA 72 bp ACGCGCAGGTCCTTCAGGTTCTGCTCCTCCACGAACTaGCTCAGAGCACTGGCAAACTTCTTGCCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: TRRSFRFCSSTN*LRALANFLPRL
Trigger: CAGCCGGGGCAAGAAGTTTGCCAGTGCTCTGAGCAAGTTCGTGGAGGAGCAGAACCTGAAGGACCTGCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000536985.6
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS TCA 72 bp GGTTCACCAGGAACCTCCGGCCCACGTCAATCACCTTaGTCAGCGACAAGTCCCTGTCGCATTTGTCGGGGT +
Preference number: 6 (lower is better)
Translates to: GSPGTSGPRQSP*SATSPCRICRG
Trigger: ACCCCGACAAATGCGACAGGGACTTGTCGCTGATCAAGGTGATTGACGTGGGCCGGAGGTTCCTGGTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000536985.6
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS CCA 72 bp TATCCAGAGAATGCTCTGCCCTTCAGGGGGCTGGACTaGTGGCTCAGGGTCCCTTCCAGGAATTCCACTCTT +
Preference number: 6 (lower is better)
Translates to: YPENALPFRGLD*WLRVPSRNSTL
Trigger: AAGAGTGGAATTCCTGGAAGGGACCCTGAGCCACCAGTCCAGCCCCCTGAAGGGCAGAGCATTCTCTGGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS GCA 72 bp GCATTCCTCATCACACCTTTCCAGTTTAGACAGGCTTaGCCTAGCAAAGGTTGTCCAGGCAGCTGCGTGGGC +
Preference number: 6 (lower is better)
Translates to: AFLITPFQFRQA*PSKGCPGSCVG
Trigger: GCCCACGCAGCTGCCTGGACAACCTTTGCTAGGGCAAGCCTGTCTAAACTGGAAAGGTGTGATGAGGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414237.5
CDS GCA 72 bp TTGGTCTCTTTCAGCCAGGTATCATTAGGAGCCGCTTaGCGCAGAGCCAGAAAGGTGAGGAAGCGAGACCAG +
Preference number: 6 (lower is better)
Translates to: LVSFSQVSLGAA*RRARKVRKRDQ
Trigger: CTGGTCTCGCTTCCTCACCTTTCTGGCTCTGCGGCAAGCGGCTCCTAATGATACCTGGCTGAAAGAGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS CAA 90 bp CTCAGGTTAATTGGTCTCTTTCAGCCAGGTATCATTAGGAGCCGCTaGCCGCAGAGCCAGAAAGGTGAGGAAGCGAGACCAGTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: LRLIGLFQPGIIRSR*PQSQKGEEARPVWA
Trigger: AGCCCAGACTGGTCTCGCTTCCTCACCTTTCTGGCTCTGCGGCAAGCGGCTCCTAATGATACCTGGCTGAAAGAGACCAATTAACCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS CAA 72 bp ATTGGTCTCTTTCAGCCAGGTATCATTAGGAGCCGCTaGCCGCAGAGCCAGAAAGGTGAGGAAGCGAGACCA +
Preference number: 6 (lower is better)
Translates to: IGLFQPGIIRSR*PQSQKGEEARP
Trigger: TGGTCTCGCTTCCTCACCTTTCTGGCTCTGCGGCAAGCGGCTCCTAATGATACCTGGCTGAAAGAGACCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640683.1
CDS GCA 72 bp GCAACTGATCCTCTTCATGAAGTCGTCCATGGCTTCTaGCGAGTTGCAGTCTTTGTAATCCGGGCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: ATDPLHEVVHGF*RVAVFVIRAGD
Trigger: ATCTCCAGCCCGGATTACAAAGACTGCAACTCGGCAGAAGCCATGGACGACTTCATGAAGAGGATCAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000317350.8
ENST00000360521.7
ENST00000379775.9
ENST00000379785.5
ENST00000379789.8
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5
ENST00000536985.6
ENST00000625260.2
ENST00000626882.2
ENST00000640683.1
CDS TCA 72 bp ATGACAGAAAGTCACGCTCGGTCTAAGAGAAAGGTCTaGCTAGTACTAGCACAGTGTTGTACTTTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: MTESHARSKRKV*LVLAQCCTFGS
Trigger: GCTGCCAAAAGTACAACACTGTGCTAGTACTAGTCAGACCTTTCTCTTAGACCGAGCGTGACTTTCTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461744.5
ENST00000467491.5
ENST00000477914.5
ENST00000490474.5