RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PFKFB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000123836

Ensembl transcript IDs: ENST00000367079.3, ENST00000367080.8, ENST00000411990.6, ENST00000464777.5, ENST00000468857.1, ENST00000473310.5, ENST00000545806.5, ENST00000615360.4, ENST00000618513.4

Found 521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCTCCAAGTCACAGCCACAGCTCTCTCAAGGACTGTATCATGGTaGCAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAA +
Preference number: 1 (lower is better)
Translates to: ALQVTATALSRTVSW*QSPQRGVSPSTCSE
Trigger: TTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAGCTGTGGCTGTGACTTGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR TCA 90 bp TGCACTGAGGCGCTGGTCCATGACCCCGCCACCCTCACTTTTATATaGGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGG +
Preference number: 1 (lower is better)
Translates to: CTEALVHDPATLTFI*EISDHNSDQWPRGR
Trigger: CCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATATAAAAGTGAGGGTGGCGGGGTCATGGACCAGCGCCTCAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR CCA 90 bp TGTCTACTTGCAAGCTCCAGAATATTCTGTGGATGTCCTGTAGTCTaGGCTGGCCCTTACAGGACCTGGCTGGAGAGGAAGGGAGAAAGG +
Preference number: 1 (lower is better)
Translates to: CLLASSRIFCGCPVV*AGPYRTWLERKGER
Trigger: CCTTTCTCCCTTCCTCTCCAGCCAGGTCCTGTAAGGGCCAGCCCAGACTACAGGACATCCACAGAATATTCTGGAGCTTGCAAGTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 90 bp AAGAACTCTCACCCTATGTCTACTTGCAAGCTCCAGAATATTCTGTaGATGTCCTGTAGTCTGGGCTGGCCCTTACAGGACCTGGCTGGA +
Preference number: 1 (lower is better)
Translates to: KNSHPMSTCKLQNIL*MSCSLGWPLQDLAG
Trigger: TCCAGCCAGGTCCTGTAAGGGCCAGCCCAGACTACAGGACATCCACAGAATATTCTGGAGCTTGCAAGTAGACATAGGGTGAGAGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 90 bp GCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTGGACAATaGAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTC +
Preference number: 1 (lower is better)
Translates to: AHLGYRCHHPSKCGQ*NLVKVPNTPPQPYL
Trigger: GAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 90 bp ACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTaGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACC +
Preference number: 1 (lower is better)
Translates to: TECPFGLQMPPSKQM*TMQPCKSAKHASPT
Trigger: GGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 90 bp ACAGTGGAACTGAAGTCCTGCCCTAAAGCAGGGGACTGGATGAGATaGCTTCAAGTAAAGGTAACAACTCCAGGCTCTGAACAGGCATTC +
Preference number: 1 (lower is better)
Translates to: TVELKSCPKAGDWMR*LQVKVTTPGSEQAF
Trigger: GAATGCCTGTTCAGAGCCTGGAGTTGTTACCTTTACTTGAAGTCATCTCATCCAGTCCCCTGCTTTAGGGCAGGACTTCAGTTCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 90 bp CTGTTTCTCATGAAAGGAGGCAAGAACTCTCACCCTATGTCTACTTaGAAGCTCCAGAATATTCTGTGGATGTCCTGTAGTCTGGGCTGG +
Preference number: 1 (lower is better)
Translates to: LFLMKGGKNSHPMST*KLQNILWMSCSLGW
Trigger: CCAGCCCAGACTACAGGACATCCACAGAATATTCTGGAGCTTGCAAGTAGACATAGGGTGAGAGTTCTTGCCTCCTTTCATGAGAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 90 bp CTCATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTaGTTCACGCCGATACACCCCAAGATTAAACACTTTGGTGGGGAC +
Preference number: 1 (lower is better)
Translates to: LIVMPKEVVGLIGLD*FTPIHPKIKHFGGD
Trigger: GTCCCCACCAAAGTGTTTAATCTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464777.5
3UTR CCA 90 bp TTTCTCATGTCCTATCTGAGGATAAGACCACCTCAGCTCCTCTTCTaGAGAAAGCGAACTAGCACAGGTGAGAGTGGGGAAATAACAGCA +
Preference number: 1 (lower is better)
Translates to: FLMSYLRIRPPQLLF*RKRTSTGESGEITA
Trigger: TGCTGTTATTTCCCCACTCTCACCTGTGCTAGTTCGCTTTCTCCAGAAGAGGAGCTGAGGTGGTCTTATCCTCAGATAGGACATGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 90 bp AGTACAGTAGCTACAAAAGGGAACTTAGAAGATGGGTACCCATTTTaGGGAGTCTTGCAGTCAGATCCTGTCCTGAAGGGCCTGGAACAA +
Preference number: 1 (lower is better)
Translates to: STVATKGNLEDGYPF*GVLQSDPVLKGLEQ
Trigger: TTGTTCCAGGCCCTTCAGGACAGGATCTGACTGCAAGACTCCCCAAAATGGGTACCCATCTTCTAAGTTCCCTTTTGTAGCTACTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR TCA 90 bp TCTCCTGGACAGTATGGGTCTAAATTAAATCCCTGGACACAATTCTaGCATCTGTGTCACCTTCAGGGAAAGTCGATTCTACCCCACCAG +
Preference number: 1 (lower is better)
Translates to: SPGQYGSKLNPWTQF*HLCHLQGKSILPHQ
Trigger: CTGGTGGGGTAGAATCGACTTTCCCTGAAGGTGACACAGATGTCAGAATTGTGTCCAGGGATTTAATTTAGACCCATACTGTCCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 90 bp ATCATTATAGTACAGCATGCGGTAGGCAGCCAGATGAAAATCATCTaGTACAGGGTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGA +
Preference number: 1 (lower is better)
Translates to: IIIVQHAVGSQMKII*YRVRSLPEGSFVRR
Trigger: TCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTACCCTGTAGCAGATGATTTTCATCTGGCTGCCTACCGCATGCTGTACTATAATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR TCA 90 bp TCCTGGTATGACTCCCCACCAGGATATCGATACAGATACTTCTCTTaGTCTCGAAGTGCAAACTCTTCTGGGTACCGTTTCTCAATCTCT +
Preference number: 1 (lower is better)
Translates to: SWYDSPPGYRYRYFS*SRSANSSGYRFSIS
Trigger: AGAGATTGAGAAACGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTATCGATATCCTGGTGGGGAGTCATACCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR GCA 90 bp ACCTCACAGCAGAAGAAAAGACTGAATGCCCATTTGGGCTACAGATaGCACCATCCAAGCAAATGTGGACAATGCAACCTTGTAAAAGTG +
Preference number: 1 (lower is better)
Translates to: TSQQKKRLNAHLGYR*HHPSKCGQCNLVKV
Trigger: CACTTTTACAAGGTTGCATTGTCCACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTTCTGCTGTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 90 bp CTCCCCACCAGGATATCGATACAGATACTTCTCTTGATCTCGAAGTaGAAACTCTTCTGGGTACCGTTTCTCAATCTCTGCATAGGTCAT +
Preference number: 1 (lower is better)
Translates to: LPTRISIQILLLISK*KLFWVPFLNLCIGH
Trigger: ATGACCTATGCAGAGATTGAGAAACGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTATCGATATCCTGGTGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR CCA 90 bp ATGGTAACTGCTAGCATAAGTATATTAGACTCTAGCCTGCTCGCCTaGAACAGTGGCAGAGACCAGCTCTTACCTTCTCACTTGAAAAGT +
Preference number: 1 (lower is better)
Translates to: MVTASISILDSSLLA*NSGRDQLLPSHLKS
Trigger: ACTTTTCAAGTGAGAAGGTAAGAGCTGGTCTCTGCCACTGTTCCAGGCGAGCAGGCTAGAGTCTAATATACTTATGCTAGCAGTTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR TCA 90 bp AGTCTATCTATCAGTCAGCACACAGACACTACTACAGTCTGTCAGTaGCAAACAGATCCTACTAGAGTCAATCAGCACACAGATCCTCCT +
Preference number: 1 (lower is better)
Translates to: SLSISQHTDTTTVCQ*QTDPTRVNQHTDPP
Trigger: AGGAGGATCTGTGTGCTGATTGACTCTAGTAGGATCTGTTTGTCACTGACAGACTGTAGTAGTGTCTGTGTGCTGACTGATAGATAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 90 bp TTCATTAGGTCTGAATTACTCTTACCTCACAGCAGAAGAAAAGACTaGATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTG +
Preference number: 1 (lower is better)
Translates to: FIRSELLLPHSRRKD*MPIWATDATIQANV
Trigger: CACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTTCTGCTGTGAGGTAAGAGTAATTCAGACCTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 90 bp CAGCAGCCTGCCTTCCAGGGGGTTATATCATTTAACATTATGATCTaGTCAAACATCAAACCCAAAGAACTGTCCTTTCAGGACTATGAG +
Preference number: 1 (lower is better)
Translates to: QQPAFQGVISFNIMI*SNIKPKELSFQDYE
Trigger: CTCATAGTCCTGAAAGGACAGTTCTTTGGGTTTGATGTTTGAGCAGATCATAATGTTAAATGATATAACCCCCTGGAAGGCAGGCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 90 bp GGACTGGATGAGATGACTTCAAGTAAAGGTAACAACTCCAGGCTCTaGACAGGCATTCCCTTAGCTGAGTTCACAAAATACCATAAAAGT +
Preference number: 1 (lower is better)
Translates to: GLDEMTSSKGNNSRL*TGIPLAEFTKYHKS
Trigger: ACTTTTATGGTATTTTGTGAACTCAGCTAAGGGAATGCCTGTTCAGAGCCTGGAGTTGTTACCTTTACTTGAAGTCATCTCATCCAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 90 bp ACTGACACTGTTCTTCTATCAAGGCAGAGAAGATGTTTTAGGGACTaGATTTCTCAGAAGACCCTCCATTCACCTGGTGATTTGTCTCTT +
Preference number: 1 (lower is better)
Translates to: TDTVLLSRQRRCFRD*ISQKTLHSPGDLSL
Trigger: AAGAGACAAATCACCAGGTGAATGGAGGGTCTTCTGAGAAATTCAGTCCCTAAAACATCTTCTCTGCCTTGATAGAAGAACAGTGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR GCA 90 bp TGCAGAGAGAAATCCATATCACAACTAAATCATTATAGTACAGCATaGGGTAGGCAGCCAGATGAAAATCATCTGCTACAGGGTAAGGAG +
Preference number: 1 (lower is better)
Translates to: CREKSISQLNHYSTA*GRQPDENHLLQGKE
Trigger: CTCCTTACCCTGTAGCAGATGATTTTCATCTGGCTGCCTACCGCATGCTGTACTATAATGATTTAGTTGTGATATGGATTTCTCTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR CCA 90 bp GAAGACCAAATGTGGGTTGCAAAGAGGATTACCCAGATCCTCATATaGAATACTCACCCATTCAGTCTAGGGGTACAAATATATTGTGTC +
Preference number: 1 (lower is better)
Translates to: EDQMWVAKRITQILI*NTHPFSLGVQIYCV
Trigger: GACACAATATATTTGTACCCCTAGACTGAATGGGTGAGTATTCCATATGAGGATCTGGGTAATCCTCTTTGCAACCCACATTTGGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 90 bp AGCTACTTAAATACATGCATGTCCAGACCCAGATCCCAGAGATTCTaGGTCAGTATTAAGCATAAGGTGGACACAGGCATGTTTATGATT +
Preference number: 1 (lower is better)
Translates to: SYLNTCMSRPRSQRF*VSIKHKVDTGMFMI
Trigger: AATCATAAACATGCCTGTGTCCACCTTATGCTTAATACTGACTCAGAATCTCTGGGATCTGGGTCTGGACATGCATGTATTTAAGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 90 bp ATAGCCATAGGACAACAGAAAAGTCAGGAGAAGCGATGTGATGGTTaGACACTTCTAGACTCAGACTGTTGCTATATTGCAAATGTCCAT +
Preference number: 1 (lower is better)
Translates to: IAIGQQKSQEKRCDG*TLLDSDCCYIANVH
Trigger: ATGGACATTTGCAATATAGCAACAGTCTGAGTCTAGAAGTGTTCAACCATCACATCGCTTCTCCTGACTTTTCTGTTGTCCTATGGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 90 bp CAGAGATACATTCATACATTTGACAATCACTGGGGAAGAGTTATCTaGTTTGTCTGTAAGGAAAAGCGAATGACTAATGCACTGAGGCGC +
Preference number: 1 (lower is better)
Translates to: QRYIHTFDNHWGRVI*FVCKEKRMTNALRR
Trigger: GCGCCTCAGTGCATTAGTCATTCGCTTTTCCTTACAGACAAATCAGATAACTCTTCCCCAGTGATTGTCAAATGTATGAATGTATCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR GCA 90 bp TCATCCCATCTGAGAATCTGTCCTAAAAGACTCAATTTGCTAACTTaGCCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGT +
Preference number: 1 (lower is better)
Translates to: SSHLRICPKRLNLLT*PWVKRCFKLKNSLS
Trigger: ACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGGGCAAGTTAGCAAATTGAGTCTTTTAGGACAGATTCTCAGATGGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 90 bp TATCATATGTTTCTTCAAAATGCCAGTGTCTCTGAAGACCAAATGTaGGTTGCAAAGAGGATTACCCAGATCCTCATATGGAATACTCAC +
Preference number: 1 (lower is better)
Translates to: YHMFLQNASVSEDQM*VAKRITQILIWNTH
Trigger: GTGAGTATTCCATATGAGGATCTGGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAAGAAACATATGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 90 bp GATTCTGAGTCAGTATTAAGCATAAGGTGGACACAGGCATGTTTATaGTTCAACAATCCTAAAGGCAATTCTAAGGAATACTCCTGGATG +
Preference number: 1 (lower is better)
Translates to: DSESVLSIRWTQACL*FNNPKGNSKEYSWM
Trigger: CATCCAGGAGTATTCCTTAGAATTGCCTTTAGGATTGTTGAATCATAAACATGCCTGTGTCCACCTTATGCTTAATACTGACTCAGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 90 bp TATGATTCAACAATCCTAAAGGCAATTCTAAGGAATACTCCTGGATaGGAACCACAGCAAAAAGTCTTCCATTACCAAATGAAAACACCC +
Preference number: 1 (lower is better)
Translates to: YDSTILKAILRNTPG*EPQQKVFHYQMKTP
Trigger: GGGTGTTTTCATTTGGTAATGGAAGACTTTTTGCTGTGGTTCTCATCCAGGAGTATTCCTTAGAATTGCCTTTAGGATTGTTGAATCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTAGTCGTTTGGAGAGGTaGGGCCTGAACATCCACATC +
Preference number: 2 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSSRLER*GLNIHI
Trigger: GATGTGGATGTTCAGGCCTCACCTCTCCAAACGACT...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR TCA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTCTTCCCCAAGAGATTaGACTCGCTTTCTCCATGCC +
Preference number: 2 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSSSPRD*TRFLHA
Trigger: GGCATGGAGAAAGCGAGTTCAATCTCTTGGGGAAGA...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR GCA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTCTCTTGATCTCGAAGTaGAAACTCTTCTGGGTACCG +
Preference number: 2 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSLLISK*KLFWVP
Trigger: CGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAG...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR GCA 90 bp GGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGGGTAGTAGACTATCTTaGTCTGGATGTAGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: GRCGGASAHSQCGLCCSWGSRLS*SGCSPG
Trigger: TCCAGGACTACATCCAGAGCAAGATAGTCTACTACC...CCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR CCA 90 bp CGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGCTTATGGTCCTCTTCAACTaGCTTGTCCACACTTTGAGG +
Preference number: 2 (lower is better)
Translates to: RCGGASAHSQCGLCCSWLMVLFN*LVHTLR
Trigger: CCTCAAAGTGTGGACAAGCCAGTTGAAGAGGACCAT...AAGCCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR CCA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTTGACTAAAAATCGCTaGCCCACGTTTATCACCTTG +
Preference number: 2 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSLTKNR*PTFITL
Trigger: CAAGGTGATAAACGTGGGCCAGCGATTTTTAGTCAA...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR CCA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCAGGCCTCGTTTTGGTaGCCCCCAAAGTCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLQASFW*PPKSSS
Trigger: GGAACTGGACTTTGGGGGCCACCAAAACGAGGCCTG...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR CCA 90 bp CGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGCTTAAGTGCAAACTCTTCTaGGTACCGTTTCTCAATCTC +
Preference number: 2 (lower is better)
Translates to: RCGGASAHSQCGLCCSWLKCKLF*VPFLNL
Trigger: GAGATTGAGAAACGGTACCCAGAAGAGTTTGCACTT...AAGCCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR CCA 90 bp TGTAAGGAAAAGCGAATGACTAATGCACTGAGGCGCTGGTCCATGACCCCGCCAGCTCGCCTGGAACAGTaGCAGAGACCAGCTCTTACC +
Preference number: 2 (lower is better)
Translates to: CKEKRMTNALRRWSMTPPARLEQ*QRPALT
Trigger: GGTAAGAGCTGGTCTCTGCCACTGTTCCAGGCGAGC...TGGCGGGGTCATGGACCAGCGCCTCAGTGCATTAGTCATTCGCTTTTCCTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR CCA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTAGGCCCTTACAGGACCTaGCTGGAGAGGAAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLGPYRT*LERKGE
Trigger: TTCTCCCTTCCTCTCCAGCCAGGTCCTGTAAGGGCC...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTATCCTGTAGTCTGGGCTaGCCCTTACAGGACCTGGCT +
Preference number: 2 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLSCSLG*PLQDLA
Trigger: AGCCAGGTCCTGTAAGGGCCAGCCCAGACTACAGGA...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGCTCCAGGCCTCGTTTTaGTGGCCCCCAAAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRLQASF*WPPKSS
Trigger: ACTGGACTTTGGGGGCCACCAAAACGAGGCCTGGAG...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR TCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCGGGGAGGAAATATGGTaGCGTTTCTCCAGGCCTCGT +
Preference number: 2 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCGEEIW*RFSRPR
Trigger: ACGAGGCCTGGAGAAACGTCACCATATTTCCTCCCC...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR GCA 90 bp TCCTCCAGAAATTTCCTTAGAGCTTGGGCAAACTGCTTTCCCCGCACCGAGAGGCTTATAGGACTTGACTaGTTCACGCCGATACACCCC +
Preference number: 2 (lower is better)
Translates to: SSRNFLRAWANCFPRTERLIGLD*FTPIHP
Trigger: GGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAG...CCTCTCGGTGCGGGGAAAGCAGTTTGCCCAAGCTCTAAGGAAATTTCTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR CCA 90 bp TCCTCCAGAAATTTCCTTAGAGCTTGGGCAAACTGCTTTCCCCGCACCGAGAGGTCTCCCGGGTTGTATTaGTGGCATCAAACACCGCAA +
Preference number: 2 (lower is better)
Translates to: SSRNFLRAWANCFPRTERSPGLY*WHQTPQ
Trigger: TTGCGGTGTTTGATGCCACCAATACAACCCGGGAGA...CCTCTCGGTGCGGGGAAAGCAGTTTGCCCAAGCTCTAAGGAAATTTCTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR TCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCAGTCGTTTGGAGAGGTaGGGCCTGAACATCCACATC +
Preference number: 2 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCSRLER*GLNIHI
Trigger: GATGTGGATGTTCAGGCCTCACCTCTCCAAACGACT...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR TCA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGACATCAGCCCCATCTTaGTGCATGAGAGGCACATGC +
Preference number: 2 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRTSAPS*CMRGTC
Trigger: GCATGTGCCTCTCATGCATCAAGATGGGGCTGATGT...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR GCA 90 bp AAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTTTTTTGTCCCCCGACTaGTCACCCGCCCTCCATCCC +
Preference number: 2 (lower is better)
Translates to: KKRLNAHLGYRCHHPSKCFLSPD*SPALHP
Trigger: GGGATGGAGGGCGGGTGAGCAGTCGGGGGACAAAAA...ACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAAGAAGATCCAAGAGTGTaGGGCATGCTCAGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKEDPRV*GMLSPK
Trigger: CTTGGGGCTGAGCATGCCCCACACTCTTGGATCTTC...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCTTCTCACACTGGTGGTaGTGGGGGCATCCCCATCCC +
Preference number: 2 (lower is better)
Translates to: NPDTILLITGYFFPCPLAFSHWW*WGHPHP
Trigger: GGGATGGGGATGCCCCCACCACCACCAGTGTGAGAA...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGTCTAGCCTGCTCGCCTaGAACAGTGGCAGAGACCAG +
Preference number: 2 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMSSLLA*NSGRDQ
Trigger: CTGGTCTCTGCCACTGTTCCAGGCGAGCAGGCTAGA...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR CCA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGCTCTTGCTTCCAATGTaGCAAATGGTAACTGCTAGC +
Preference number: 2 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKLLLPM*QMVTAS
Trigger: GCTAGCAGTTACCATTTGCCACATTGGAAGCAAGAG...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR GCA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCCAAGAGTGTGGGGCATaGTCAGCCCCAAGGGAGTGT +
Preference number: 2 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPQECGA*SAPREC
Trigger: ACACTCCCTTGGGGCTGAGCATGCCCCACACTCTTG...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCGCAGGAGGCCAGGGCTaGAGGGAAACACACAGTTAC +
Preference number: 2 (lower is better)
Translates to: VRALFHSTFSWLLPARLLAGGQG*RETHSY
Trigger: GTAACTGTGTGTTTCCCTCCAGCCCTGGCCTCCTGC...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR GCA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTAGACACCACAATGCCATaGATTACACTGGACAATCCA +
Preference number: 2 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLDTTMP*ITLDNP
Trigger: TGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTC...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR GCA 90 bp TGTAAGGAAAAGCGAATGACTAATGCACTGAGGCGCTGGTCCATGACCCCGCCATGCATGAGAGGCACATaGATCAAGTCAAAAGTACAG +
Preference number: 2 (lower is better)
Translates to: CKEKRMTNALRRWSMTPPCMRGT*IKSKVQ
Trigger: CTGTACTTTTGACTTGATGCATGTGCCTCTCATGCA...TGGCGGGGTCATGGACCAGCGCCTCAGTGCATTAGTCATTCGCTTTTCCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR GCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCTGCTACTCACCCTTTTaGCCAGCAAGTGAGCATTTG +
Preference number: 2 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCCYSPF*PASEHL
Trigger: CAAATGCTCACTTGCTGGGCAAAAGGGTGAGTAGCA...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR CCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCTCATTCTCACACTGGTaGTGGTGGGGGCATCCCCAT +
Preference number: 2 (lower is better)
Translates to: VRALFHSTFSWLLPARLLSFSHW*WWGHPH
Trigger: ATGGGGATGCCCCCACCACCACCAGTGTGAGAATGA...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CAA 90 bp CCTGAATCTAACTGCCCTTCTAAACAGCCCCAGAGGATACTGGCTTaGGCAGGAAAAGTTGCTGTGATTGGCAAAGAACCTGAGAGTCAT +
Preference number: 2 (lower is better)
Translates to: PESNCPSKQPQRILA*AGKVAVIGKEPESH
Trigger: ATGACTCTCAGGTTCTTTGCCAATCACAGCAACTTTTCCTGCCAAAGCCAGTATCCTCTGGGGCTGTTTAGAAGGGCAGTTAGATTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CAA 90 bp AAGTACAGTAGCTACAAAAGGGAACTTAGAAGATGGGTACCCATTTaGGGGAGTCTTGCAGTCAGATCCTGTCCTGAAGGGCCTGGAACA +
Preference number: 2 (lower is better)
Translates to: KYSSYKRELRRWVPI*GSLAVRSCPEGPGT
Trigger: TGTTCCAGGCCCTTCAGGACAGGATCTGACTGCAAGACTCCCCAAAATGGGTACCCATCTTCTAAGTTCCCTTTTGTAGCTACTGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR TCA 90 bp AAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGAGGACTTATAGGACTTaGCTGCTTCACGCCGATACA +
Preference number: 2 (lower is better)
Translates to: KEVVGLIGLDCFTPIHPKRTYRT*LLHADT
Trigger: TGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCT...CTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411990.6
ENST00000464777.5
3UTR-3UTR TCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCAGATGTTTTAGGGACTaGATTTCTCAGAAGACCCTC +
Preference number: 2 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCRCFRD*ISQKTL
Trigger: GAGGGTCTTCTGAGAAATTCAGTCCCTAAAACATCT...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR GCA 90 bp GAAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGAAGACATTTCCCACATaGTCAGAGCCAGATTCTCCC +
Preference number: 2 (lower is better)
Translates to: EEKTECPFGLQMPPSKQMKTFPT*SEPDSP
Trigger: GGGAGAATCTGGCTCTGAGCATGTGGGAAATGTCTT...CATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR GCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTACTCCTGAATCTAACTaGCCTTCTAAACAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLITPESN*PSKQPQ
Trigger: CTGGGGCTGTTTAGAAGGGCAGTTAGATTCAGGAGT...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp AAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTAGCCCCAGAGGATACTaGCTTTGGCAGGAAAAGTTG +
Preference number: 2 (lower is better)
Translates to: KKRLNAHLGYRCHHPSKCSPRGY*LWQEKL
Trigger: CAACTTTTCCTGCCAAAGCCAGTATCCTCTGGGGCT...ACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCCAACCTTTATCATCCTaGCAGGGTCTGCACCTCTCT +
Preference number: 2 (lower is better)
Translates to: NPDTILLITGYFFPCPLAQPLSS*QGLHLS
Trigger: AGAGAGGTGCAGACCCTGCCAGGATGATAAAGGTTG...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp CTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGAGGTCGGTAGGTGTTTGCGGATCTTCATaGCCTCCTCATTGTCATGCC +
Preference number: 2 (lower is better)
Translates to: LDERKILVIVVWVKRSVGVCGSS*PPHCHA
Trigger: GGCATGACAATGAGGAGGCCATGAAGATCCGCAAAC...ACCTACCGACCTCTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR TCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCATGGGAGAAAAGACATaGCTGCTCTCTAAGAGCCCT +
Preference number: 2 (lower is better)
Translates to: VRALFHSTFSWLLPARLLMGEKT*LLSKSP
Trigger: AGGGCTCTTAGAGAGCAGTCATGTCTTTTCTCCCAT...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCCTCAAACATCAGTGGTaGCTCCTGAATCTAACTGCC +
Preference number: 2 (lower is better)
Translates to: NPDTILLITGYFFPCPLALKHQW*LLNLTA
Trigger: GGCAGTTAGATTCAGGAGTCACCACTGATGTTTGAG...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR GCA 90 bp AAGCAAATGTGGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCCTCAATTTGCTAACTTaGCCCTGGGTGAAAAGATGT +
Preference number: 2 (lower is better)
Translates to: KQMWTMQPCKSAKHASPTLNLLT*PWVKRC
Trigger: ACATCTTTTCACCCAGGGGCAAGTTAGCAAATTGAG...GGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR GCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTCTTCTCTGCCTCTTaGCTTGAGCAACTCAAACAT +
Preference number: 2 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLILFSAS*LEQLKH
Trigger: ATGTTTGAGTTGCTCAAGGCAAGAGGCAGAGAAGAG...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR GCA 90 bp AAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTGCAGCCTTTAGAAGCTaGCTATGGTATCCTACTTGG +
Preference number: 2 (lower is better)
Translates to: KKRLNAHLGYRCHHPSKCAAFRS*LWYPTW
Trigger: CCAAGTAGGATACCATAGGCAGCTTCTAAAGGCTGC...ACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTTGCCATGCATTACACTaGACAATCCAGAGGGGACAT +
Preference number: 2 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCCHALH*TIQRGH
Trigger: ATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCA...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCTTAATGACTCCTTGGTaGTTAGTGACAAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: VRALFHSTFSWLLPARLLLMTPW*LVTRAG
Trigger: TCCTGCCCTTGTCACTAATCACCAAGGAGTCATTAA...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTTCAGAATTCCTAGGCTaGCACTTTTGTCTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLISEFLG*HFCLRN
Trigger: GTTTCTCAGACAAAAGTGTCAGCCTAGGAATTCTGA...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTAAGCGATGTGATGGTTaGACACTTCTAGACTCAGAC +
Preference number: 2 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCKRCDG*TLLDSD
Trigger: GTCTGAGTCTAGAAGTGTTCAACCATCACATCGCTT...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp ACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTTCAGGAGAAGCGATGTaGTGGTTGAACACTTCTAGA +
Preference number: 2 (lower is better)
Translates to: TMQPCKSAKHASPTISHSSGEAM*WLNTSR
Trigger: TCTAGAAGTGTTCAACCATCACATCGCTTCTCCTGA...AGAATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCAGCAGAAGAAAAGACTaGATGCCCATTTGGGCTACA +
Preference number: 2 (lower is better)
Translates to: VRALFHSTFSWLLPARLLSRRKD*MPIWAT
Trigger: TGTAGCCCAAATGGGCATTCAGTCTTTTCTTCTGCT...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAACTAGGCTTCCCAATCTaGCCCATTCCCATTCAACCC +
Preference number: 2 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKLGFPI*PIPIQP
Trigger: GGGTTGAATGGGAATGGGTCAGATTGGGAAGCCTAG...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR GCA 90 bp AAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTAGACAGACACCACAATaGCATGCATTACACTGGACA +
Preference number: 2 (lower is better)
Translates to: KKRLNAHLGYRCHHPSKCRQTPQ*HALHWT
Trigger: TGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTCT...ACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR GCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCCATTTGGGCTACAGATaGCACCATCCAAGCAAATGT +
Preference number: 2 (lower is better)
Translates to: NPDTILLITGYFFPCPLAHLGYR*HHPSKC
Trigger: ACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATG...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTGCAGAAAGCATTAACTaGGCCAGACTTGTCTCTTGT +
Preference number: 2 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCAESIN*ARLVSC
Trigger: ACAAGAGACAAGTCTGGCCCAGTTAATGCTTTCTGC...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAGGATGTCCTGTAGTCTaGGCTGGCCCTTACAGGACC +
Preference number: 2 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKGCPVV*AGPYRT
Trigger: GGTCCTGTAAGGGCCAGCCCAGACTACAGGACATCC...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CAA 90 bp CCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATaGGCCACTCCAACCACCAATGAGTTTCTGTCAATTAAGATCTCC +
Preference number: 2 (lower is better)
Translates to: PDTILLITGYFFPCP*ATPTTNEFLSIKIS
Trigger: GGAGATCTTAATTGACAGAAACTCATTGGTGGTTGGAGTGGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAAAACAACTCCAGGCTCTaGACAGGCATTCCCTTAGCT +
Preference number: 2 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKNNSRL*TGIPLA
Trigger: AGCTAAGGGAATGCCTGTTCAGAGCCTGGAGTTGTT...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp CACGTTTATCACCTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGTCAAACACCGCAATCTaGCCATTCTCCTCAGTGAGA +
Preference number: 2 (lower is better)
Translates to: HVYHLDERKILVIVVWVKSNTAI*PFSSVR
Trigger: TCTCACTGAGGAGAATGGTCAGATTGCGGTGTTTGA...CTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAGGTGATAAACGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR GCA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTCACCCTATGTCTACTTaGAAGCTCCAGAATATTCTG +
Preference number: 2 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCHPMST*KLQNIL
Trigger: CAGAATATTCTGGAGCTTGCAAGTAGACATAGGGTG...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR GCA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTGTCTGTGGATCAAAGTaGTCCCTCTTCTCATTCATT +
Preference number: 2 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCVCGSK*SLFSFI
Trigger: AATGAATGAGAAGAGGGAGCACTTTGATCCACAGAC...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCAGATAACTTTAAGGTaGGGAGTCACCTATCTCTTT +
Preference number: 2 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLIQITLR*GVTYLF
Trigger: AAAGAGATAGGTGACTCCCCACCTTAAAGTTATCTG...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTCTATGGTATCCTACTTaGGACATACGAGTAAAGGAC +
Preference number: 2 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCLWYPT*DIRVKD
Trigger: GTCCTTTACTCGTATGTCCCAAGTAGGATACCATAG...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCACACAGGCATGTTTATaGTTCAACAATCCTAAAGGC +
Preference number: 2 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPTQACL*FNNPKG
Trigger: GCCTTTAGGATTGTTGAATCATAAACATGCCTGTGT...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTAGATCCCAGAGATTCTaGGTCAGTATTAAGCATAAG +
Preference number: 2 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCRSQRF*VSIKHK
Trigger: CTTATGCTTAATACTGACTCAGAATCTCTGGGATCT...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCGCTGACACTTTTGTCTaGGAAACTACTATCCAGTAT +
Preference number: 2 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPADTFV*ETTIQY
Trigger: ATACTGGATAGTAGTTTCTCAGACAAAAGTGTCAGC...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp TCTCAAGGAGCTTTCTTGACTTACTCACGTGATATAAATGGCACTCTACTTTTCCCTCCATTCACCTGGTaGTTTGTCTCTTGCTTCCAA +
Preference number: 2 (lower is better)
Translates to: SQGAFLTYSRDINGTLLFPPFTW*FVSCFQ
Trigger: TTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGG...GAAAAGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR CCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCTTGCTAACTTGCCCCTaGGTGAAAAGATGTTTCAAA +
Preference number: 2 (lower is better)
Translates to: NPDTILLITGYFFPCPLALLTCP*VKRCFK
Trigger: TTTGAAACATCTTTTCACCCAGGGGCAAGTTAGCAA...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CAA 90 bp ATATGTTTCTTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTaGCAAAGAGGATTACCCAGATCCTCATATGGAATACTCACCCAT +
Preference number: 2 (lower is better)
Translates to: ICFFKMPVSLKTKCG*QRGLPRSSYGILTH
Trigger: ATGGGTGAGTATTCCATATGAGGATCTGGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAAGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCAAAATAACCTTCCTCTaGACAAGGACCTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: NPDTILLITGYFFPCPLAKITFL*TRTFSS
Trigger: AGAAGAAAAGGTCCTTGTCCAGAGGAAGGTTATTTT...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAGCACACAGATCCTCCTaGTCTACCAGTTGGTCAACA +
Preference number: 2 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKAHRSS*STSWST
Trigger: TGTTGACCAACTGGTAGACCAGGAGGATCTGTGTGC...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGATGACAAAAAGTCACTaGTTCAGGTTGCTAAATGTT +
Preference number: 2 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMMTKSH*FRLLNV
Trigger: AACATTTAGCAACCTGAACCAGTGACTTTTTGTCAT...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR CAA 90 bp ACTGAATTTCTCAGAAGACCCTCCATTCACCTGGTGATTTGTCTCTaGCTTCCAATGTGGCAAATGGTAACTGCTAGCATAAGTATATTA +
Preference number: 2 (lower is better)
Translates to: TEFLRRPSIHLVICL*LPMWQMVTASISIL
Trigger: TAATATACTTATGCTAGCAGTTACCATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCTGAGAAATTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR CAA 90 bp TCCTTTCAGGACTATGAGGAATTCAGAATTCCTAGGCTGACACTTTaGTCTGAGAAACTACTATCCAGTATTTTTCCACCTAACTTCCTA +
Preference number: 2 (lower is better)
Translates to: SFQDYEEFRIPRLTL*SEKLLSSIFPPNFL
Trigger: TAGGAAGTTAGGTGGAAAAATACTGGATAGTAGTTTCTCAGACAAAAGTGTCAGCCTAGGAATTCTGAATTCCTCATAGTCCTGAAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAACAGGAAAAGTTGCTGTaGTTGGCAAAGAACCTGAGA +
Preference number: 2 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKQEKLL*LAKNLR
Trigger: TCTCAGGTTCTTTGCCAATCACAGCAACTTTTCCTG...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAATCTAAGGAATACTCCTaGATGAGAACCACAGCAAAA +
Preference number: 2 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKSKEYS*MRTTAK
Trigger: TTTTGCTGTGGTTCTCATCCAGGAGTATTCCTTAGA...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAATGCGTAGGTAAACATTaGTCACAGATATCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKCVGKH*SQISSE
Trigger: TTCACTGGATATCTGTGACCAATGTTTACCTACGCA...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR TCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAACTACAGTCTGTCAGTaGCAAACAGATCCTACTAGA +
Preference number: 2 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKTTVCQ*QTDPTR
Trigger: TCTAGTAGGATCTGTTTGTCACTGACAGACTGTAGT...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAATTTGGCAGGAAAAGTTaGTGTGATTGGCAAAGAACC +
Preference number: 2 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKFGRKS*CDWQRT
Trigger: GGTTCTTTGCCAATCACAGCAACTTTTCCTGCCAAA...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CAA 90 bp TTGCCCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTaGTCCTATAAACACATAACCTCATGTTCTGTGTTAAGATTAATG +
Preference number: 2 (lower is better)
Translates to: LPLGEKMFQTEEQLK*SYKHITSCSVLRLM
Trigger: CATTAATCTTAACACAGAACATGAGGTTATGTGTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGGGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAATTTAGAAGCTGCCTATaGTATCCTACTTGGGACATA +
Preference number: 2 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKFRSCL*YPTWDI
Trigger: TATGTCCCAAGTAGGATACCATAGGCAGCTTCTAAA...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR GCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAACTTAAAATCCCCAGCTaGTCTCTAGAGACAATTATT +
Preference number: 2 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKLKIPS*SLETII
Trigger: AATAATTGTCTCTAGAGAGCAGCTGGGGATTTTAAG...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CAA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTCTCTCCCGGGTTGTATaGGTGGCATCAAACACCGCA +
Preference number: 3 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSLSRVV*VASNTA
Trigger: TGCGGTGTTTGATGCCACCAATACAACCCGGGAGAG...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR CAA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTATCTTCCCCAAGAGATaGAACTCGCTTTCTCCATGC +
Preference number: 3 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSIFPKR*NSLSPC
Trigger: GCATGGAGAAAGCGAGTTCAATCTCTTGGGGAAGAT...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR CAA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGCTTGTCCACACTTaGAGGTCTGTTATTTCCTGT +
Preference number: 3 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSWLVHT*RSVISC
Trigger: ACAGGAAATAACAGACCTCAAAGTGTGGACAAGCCA...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR TCA 72 bp GTCACAGCCACAGCTCTCTCAAGGACTGTATCATGGTaGCAGAGCCCACAGAGGGGCGTGTCTCCTTCCACC +
Preference number: 3 (lower is better)
Translates to: VTATALSRTVSW*QSPQRGVSPST
Trigger: GGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAGCTGTGGCTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR CAA 90 bp CGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGCTTTTAACCTCCAGAATATaGGCAGCAATGACATCAGGA +
Preference number: 3 (lower is better)
Translates to: RCGGASAHSQCGLCCSWLLTSRI*AAMTSG
Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTTAA...AAGCCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR TCA 72 bp GGTGGGCATAGAGGGAGGAAGTTAATGACTCCTTGGTaGTTAGTGACAAGGGCAGGAGGCCAGGGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: GGHRGRKLMTPW*LVTRAGGQGWR
Trigger: CCTCCAGCCCTGGCCTCCTGCCCTTGTCACTAATCACCAAGGAGTCATTAACTTCCTCCCTCTATGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 72 bp GCAAGCTCCAGAATATTCTGTGGATGTCCTGTAGTCTaGGCTGGCCCTTACAGGACCTGGCTGGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: ASSRIFCGCPVV*AGPYRTWLERK
Trigger: CTTCCTCTCCAGCCAGGTCCTGTAAGGGCCAGCCCAGACTACAGGACATCCACAGAATATTCTGGAGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CAA 90 bp TCCTCCAGAAATTTCCTTAGAGCTTGGGCAAACTGCTTTCCCCGCACCGAGAGGACCAGAGCACACTGTTaGCGGATCTTCATGGCCTCC +
Preference number: 3 (lower is better)
Translates to: SSRNFLRAWANCFPRTERTRAHC*RIFMAS
Trigger: GGAGGCCATGAAGATCCGCAAACAGTGTGCTCTGGT...CCTCTCGGTGCGGGGAAAGCAGTTTGCCCAAGCTCTAAGGAAATTTCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR GCA 72 bp GATCAGAGTCGGGGAGTTGGTCATGTAGGAGGCCCATaGTATAGTCCCAGCTACTCAGGAGGATTGCTTGAG +
Preference number: 3 (lower is better)
Translates to: DQSRGVGHVGGP*YSPSYSGGLLE
Trigger: CTCAAGCAATCCTCCTGAGTAGCTGGGACTATAGCATGGGCCTCCTACATGACCAACTCCCCGACTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464777.5
3UTR GCA 72 bp GAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTaGTGGATGCTGAACCGCCTGCAGCCCAGCTTATCA +
Preference number: 3 (lower is better)
Translates to: EGSFVRRKAAPS*WMLNRLQPSLS
Trigger: TGATAAGCTGGGCTGCAGGCGGTTCAGCATCCAGCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR CCA 72 bp GGAGGAAATATGGTGACGTTTCTCCAGGCCTCGTTTTaGTGGCCCCCAAAGTCCAGTTCCCACTTAACTTCC +
Preference number: 3 (lower is better)
Translates to: GGNMVTFLQASF*WPPKSSSHLTS
Trigger: GGAAGTTAAGTGGGAACTGGACTTTGGGGGCCACCAAAACGAGGCCTGGAGAAACGTCACCATATTTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR CAA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTATTTTTCCCGTGCCCATaGGCCACTCCAACCACCAAT +
Preference number: 3 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLFFPCP*ATPTTN
Trigger: ATTGGTGGTTGGAGTGGCCAATGGGCACGGGAAAAA...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CAA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTAGTCACTGGTTCAGGTaGCTAAATGTTTTGAGGCAC +
Preference number: 3 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLSHWFR*LNVLRH
Trigger: GTGCCTCAAAACATTTAGCAACCTGAACCAGTGACT...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR CAA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGCTGGTGATTTGTCTCTaGCTTCCAATGTGGCAAATG +
Preference number: 3 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKLVICL*LPMWQM
Trigger: CATTTGCCACATTGGAAGCAAGAGACAAATCACCAG...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR CAA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGCCATTTTGGGGAGTCTaGCAGTCAGATCCTGTCCTG +
Preference number: 3 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRPFWGV*QSDPVL
Trigger: CAGGACAGGATCTGACTGCAAGACTCCCCAAAATGG...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR TCA 72 bp ATCTACAGTAGAACTCTCTTCCTAGGCTTCCCAATCTaGCCCATTCCCATTCAACCCAGAGGTGCTCAGCCC +
Preference number: 3 (lower is better)
Translates to: IYSRTLFLGFPI*PIPIQPRGAQP
Trigger: GGGCTGAGCACCTCTGGGTTGAATGGGAATGGGTCAGATTGGGAAGCCTAGGAAGAGAGTTCTACTGTAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 72 bp GTACAGCATGCGGTAGGCAGCCAGATGAAAATCATCTaGTACAGGGTAAGGAGCCTTCCTGAAGGCAGCTTT +
Preference number: 3 (lower is better)
Translates to: VQHAVGSQMKII*YRVRSLPEGSF
Trigger: AAAGCTGCCTTCAGGAAGGCTCCTTACCCTGTAGCAGATGATTTTCATCTGGCTGCCTACCGCATGCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR CCA 72 bp GGAAATATGGTGACGTTTCTCCAGGCCTCGTTTTGGTaGCCCCCAAAGTCCAGTTCCCACTTAACTTCCTGT +
Preference number: 3 (lower is better)
Translates to: GNMVTFLQASFW*PPKSSSHLTSC
Trigger: ACAGGAAGTTAAGTGGGAACTGGACTTTGGGGGCCACCAAAACGAGGCCTGGAGAAACGTCACCATATTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR TCA 72 bp TCTGCCTCTTGCCTTGAGCAACTCAAACATCAGTGGTaGCTCCTGAATCTAACTGCCCTTCTAAACAGCCCC +
Preference number: 3 (lower is better)
Translates to: SASCLEQLKHQW*LLNLTALLNSP
Trigger: GGGGCTGTTTAGAAGGGCAGTTAGATTCAGGAGTCACCACTGATGTTTGAGTTGCTCAAGGCAAGAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 72 bp TCCCAACCACCCAGGAGAACCACATCAGCCCCATCTTaGTGCATGAGAGGCACATGCATCAAGTCAAAAGTA +
Preference number: 3 (lower is better)
Translates to: SQPPRRTTSAPS*CMRGTCIKSKV
Trigger: TACTTTTGACTTGATGCATGTGCCTCTCATGCATCAAGATGGGGCTGATGTGGTTCTCCTGGGTGGTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR GCA 72 bp GTCAATCACCCCTTCCTTCCTAGACAGACACCACAATaGCATGCATTACACTGGACAATCCAGAGGGGACAT +
Preference number: 3 (lower is better)
Translates to: VNHPFLPRQTPQ*HALHWTIQRGH
Trigger: ATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTCTAGGAAGGAAGGGGTGATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 72 bp CTTCCTAGACAGACACCACAATGCCATGCATTACACTaGACAATCCAGAGGGGACATGAAAGTGGGGGAAGA +
Preference number: 3 (lower is better)
Translates to: LPRQTPQCHALH*TIQRGHESGGR
Trigger: TCTTCCCCCACTTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTCTAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 72 bp GCTAGCATAAGTATATTAGACTCTAGCCTGCTCGCCTaGAACAGTGGCAGAGACCAGCTCTTACCTTCTCAC +
Preference number: 3 (lower is better)
Translates to: ASISILDSSLLA*NSGRDQLLPSH
Trigger: GTGAGAAGGTAAGAGCTGGTCTCTGCCACTGTTCCAGGCGAGCAGGCTAGAGTCTAATATACTTATGCTAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR CAA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTAGGTTGCTAAATGTTTaGAGGCACAGGGAAGTTAAA +
Preference number: 3 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLRLLNV*RHREVK
Trigger: TTTAACTTCCCTGTGCCTCAAAACATTTAGCAACCT...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR TCA 72 bp CCAAGCTTTTCAGTAGATCCCAGTCGTTTGGAGAGGTaGGGCCTGAACATCCACATCATTAGCAAGGCAACA +
Preference number: 3 (lower is better)
Translates to: PSFSVDPSRLER*GLNIHIISKAT
Trigger: TGTTGCCTTGCTAATGATGTGGATGTTCAGGCCTCACCTCTCCAAACGACTGGGATCTACTGAAAAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR GCA 72 bp GCAACTCAAACATCAGTGGTGACTCCTGAATCTAACTaGCCTTCTAAACAGCCCCAGAGGATACTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: ATQTSVVTPESN*PSKQPQRILAL
Trigger: CAAAGCCAGTATCCTCTGGGGCTGTTTAGAAGGGCAGTTAGATTCAGGAGTCACCACTGATGTTTGAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 72 bp CCAGATCCATTTAGACCCACTGCAGAAAGCATTAACTaGGCCAGACTTGTCTCTTGTCAATCACCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: PDPFRPTAESIN*ARLVSCQSPLP
Trigger: AGGAAGGGGTGATTGACAAGAGACAAGTCTGGCCCAGTTAATGCTTTCTGCAGTGGGTCTAAATGGATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 72 bp CCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTaGACAATGCAACCTTGTAAAAGTGCCAAACACGCC +
Preference number: 3 (lower is better)
Translates to: PFGLQMPPSKQM*TMQPCKSAKHA
Trigger: GGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 72 bp AGTTCAAAATCATGTCCCTCCTCTCCCGGGTTGTATTaGTGGCATCAAACACCGCAATCTGACCATTCTCCT +
Preference number: 3 (lower is better)
Translates to: SSKSCPSSPGLY*WHQTPQSDHSP
Trigger: AGGAGAATGGTCAGATTGCGGTGTTTGATGCCACCAATACAACCCGGGAGAGGAGGGACATGATTTTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR-3UTR CAA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAACCTAAAAGACTCAATTaGCTAACTTGCCCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKPKRLN*LTCPWV
Trigger: CACCCAGGGGCAAGTTAGCAAATTGAGTCTTTTAGG...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CAA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGCATTCACCTGGTGATTaGTCTCTTGCTTCCAATGTG +
Preference number: 3 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRHSPGD*SLASNV
Trigger: CACATTGGAAGCAAGAGACAAATCACCAGGTGAATG...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR-3UTR CAA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTTTAACTGGGCCAGACTaGTCTCTTGTCAATCACCCC +
Preference number: 3 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCLTGPD*SLVNHP
Trigger: GGGGTGATTGACAAGAGACAAGTCTGGCCCAGTTAA...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 72 bp GACTCCCCACCAGGATATCGATACAGATACTTCTCTTaGTCTCGAAGTGCAAACTCTTCTGGGTACCGTTTC +
Preference number: 3 (lower is better)
Translates to: DSPPGYRYRYFS*SRSANSSGYRF
Trigger: GAAACGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTATCGATATCCTGGTGGGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR TCA 72 bp CACGTTCTCTCTGTTCCTTTCAGGATAGTCAGGGCTTaGTACCTTAACCTCCAGAATATTGGCAGCAATGAC +
Preference number: 3 (lower is better)
Translates to: HVLSVPFRIVRA*YLNLQNIGSND
Trigger: GTCATTGCTGCCAATATTCTGGAGGTTAAGGTATCAAGCCCTGACTATCCTGAAAGGAACAGAGAGAACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR GCA 72 bp CAGAAGAAAAGACTGAATGCCCATTTGGGCTACAGATaGCACCATCCAAGCAAATGTGGACAATGCAACCTT +
Preference number: 3 (lower is better)
Translates to: QKKRLNAHLGYR*HHPSKCGQCNL
Trigger: AAGGTTGCATTGTCCACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 72 bp CACCTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTaGAACCCGACTCAGTTGTTACATATTTTCAATAAG +
Preference number: 3 (lower is better)
Translates to: HLQGKSILPHQC*NPTQLLHIFNK
Trigger: CTTATTGAAAATATGTAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 72 bp TGTCACCTTCAGGGAAAGTCGATTCTACCCCACCAGTaGTGCAACCCGACTCAGTTGTTACATATTTTCAAT +
Preference number: 3 (lower is better)
Translates to: CHLQGKSILPHQ*CNPTQLLHIFN
Trigger: ATTGAAAATATGTAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAGGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CAA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCGAAGTTAATGACTCCTaGGTGATTAGTGACAAGGGC +
Preference number: 3 (lower is better)
Translates to: NPDTILLITGYFFPCPLAEVNDS*VISDKG
Trigger: GCCCTTGTCACTAATCACCAAGGAGTCATTAACTTC...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CAA 90 bp AAGCAAATGTGGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATGAGAACCCTAAACTaGCCTCTCAGAAAAACATAC +
Preference number: 3 (lower is better)
Translates to: KQMWTMQPCKSAKHASPTMRTLN*PLRKTY
Trigger: GTATGTTTTTCTGAGAGGCAAGTTTAGGGTTCTCAT...GGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CAA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCCCTATGGTATCCTACTaGGGACATACGAGTAAAGGA +
Preference number: 3 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPPMVSY*GHTSKG
Trigger: TCCTTTACTCGTATGTCCCAAGTAGGATACCATAGG...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CAA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCAGGATGCTGAAGCCCTaGCTTGCCAAATTCCAATTT +
Preference number: 3 (lower is better)
Translates to: VRALFHSTFSWLLPARLLRMLKP*LAKFQF
Trigger: AAATTGGAATTTGGCAAGCAAGGGCTTCAGCATCCT...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 72 bp ATGAAAGGAGGCAAGAACTCTCACCCTATGTCTACTTaGAAGCTCCAGAATATTCTGTGGATGTCCTGTAGT +
Preference number: 3 (lower is better)
Translates to: MKGGKNSHPMST*KLQNILWMSCS
Trigger: ACTACAGGACATCCACAGAATATTCTGGAGCTTGCAAGTAGACATAGGGTGAGAGTTCTTGCCTCCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 72 bp GATACAATTCTTCTGATTACTGGATACTTTTTCCCGTaGCCATTGGCCACTCCAACCACCAATGAGTTTCTG +
Preference number: 3 (lower is better)
Translates to: DTILLITGYFFP*PLATPTTNEFL
Trigger: CAGAAACTCATTGGTGGTTGGAGTGGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 72 bp ATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTaGTTCACGCCGATACACCCCAAGATTAAACACTTT +
Preference number: 3 (lower is better)
Translates to: MPKEVVGLIGLD*FTPIHPKIKHF
Trigger: AAAGTGTTTAATCTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464777.5
3UTR-3UTR CAA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTTCACCCTATGTCTACTaGCAAGCTCCAGAATATTCT +
Preference number: 3 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCSPYVY*QAPEYS
Trigger: AGAATATTCTGGAGCTTGCAAGTAGACATAGGGTGA...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 72 bp GGACAACAGAAAAGTCAGGAGAAGCGATGTGATGGTTaGACACTTCTAGACTCAGACTGTTGCTATATTGCA +
Preference number: 3 (lower is better)
Translates to: GQQKSQEKRCDG*TLLDSDCCYIA
Trigger: TGCAATATAGCAACAGTCTGAGTCTAGAAGTGTTCAACCATCACATCGCTTCTCCTGACTTTTCTGTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 72 bp AGGATATCGATACAGATACTTCTCTTGATCTCGAAGTaGAAACTCTTCTGGGTACCGTTTCTCAATCTCTGC +
Preference number: 3 (lower is better)
Translates to: RISIQILLLISK*KLFWVPFLNLC
Trigger: GCAGAGATTGAGAAACGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTATCGATATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR CCA 72 bp ATGTGGGTTGCAAAGAGGATTACCCAGATCCTCATATaGAATACTCACCCATTCAGTCTAGGGGTACAAATA +
Preference number: 3 (lower is better)
Translates to: MWVAKRITQILI*NTHPFSLGVQI
Trigger: TATTTGTACCCCTAGACTGAATGGGTGAGTATTCCATATGAGGATCTGGGTAATCCTCTTTGCAACCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 72 bp TTTCTTCAAAATGCCAGTGTCTCTGAAGACCAAATGTaGGTTGCAAAGAGGATTACCCAGATCCTCATATGG +
Preference number: 3 (lower is better)
Translates to: FLQNASVSEDQM*VAKRITQILIW
Trigger: CCATATGAGGATCTGGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 72 bp CACCTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTaGGTCAAGAGGTCGGTAGGTAACTTTGTAGCATTC +
Preference number: 3 (lower is better)
Translates to: HLDERKILVIVV*VKRSVGNFVAF
Trigger: GAATGCTACAAAGTTACCTACCGACCTCTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR TCA 72 bp CAGTATGGGTCTAAATTAAATCCCTGGACACAATTCTaGCATCTGTGTCACCTTCAGGGAAAGTCGATTCTA +
Preference number: 3 (lower is better)
Translates to: QYGSKLNPWTQF*HLCHLQGKSIL
Trigger: TAGAATCGACTTTCCCTGAAGGTGACACAGATGTCAGAATTGTGTCCAGGGATTTAATTTAGACCCATACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CAA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCGAAGAACAGCTTAAGTaGTCCTATAAACACATAACC +
Preference number: 3 (lower is better)
Translates to: VRALFHSTFSWLLPARLLEEQLK*SYKHIT
Trigger: GGTTATGTGTTTATAGGACAACTTAAGCTGTTCTTC...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CAA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAACCTAGGCTGACACTTTaGTCTGAGAAACTACTATCC +
Preference number: 3 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKPRLTL*SEKLLS
Trigger: GGATAGTAGTTTCTCAGACAAAAGTGTCAGCCTAGG...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR GCA 72 bp GCCTTCCAGGGGGTTATATCATTTAACATTATGATCTaGTCAAACATCAAACCCAAAGAACTGTCCTTTCAG +
Preference number: 3 (lower is better)
Translates to: AFQGVISFNIMI*SNIKPKELSFQ
Trigger: CTGAAAGGACAGTTCTTTGGGTTTGATGTTTGAGCAGATCATAATGTTAAATGATATAACCCCCTGGAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR-3UTR CAA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAACTCAATTTGCTAACTaGCCCCTGGGTGAAAAGATG +
Preference number: 3 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKTQFAN*PLGEKM
Trigger: CATCTTTTCACCCAGGGGCAAGTTAGCAAATTGAGT...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 72 bp ACAATCCTAAAGGCAATTCTAAGGAATACTCCTGGATaGGAACCACAGCAAAAAGTCTTCCATTACCAAATG +
Preference number: 3 (lower is better)
Translates to: TILKAILRNTPG*EPQQKVFHYQM
Trigger: CATTTGGTAATGGAAGACTTTTTGCTGTGGTTCTCATCCAGGAGTATTCCTTAGAATTGCCTTTAGGATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CCA 72 bp GCAATTCAGATACAAAAACATTGCGTAGGTAAACATTaGTCACAGATATCCAGTGAAAGGCTTACTGGAAAA +
Preference number: 3 (lower is better)
Translates to: AIQIQKHCVGKH*SQISSERLTGK
Trigger: TTTTCCAGTAAGCCTTTCACTGGATATCTGTGACCAATGTTTACCTACGCAATGTTTTTGTATCTGAATTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 72 bp TCAGTATTAAGCATAAGGTGGACACAGGCATGTTTATaGTTCAACAATCCTAAAGGCAATTCTAAGGAATAC +
Preference number: 3 (lower is better)
Translates to: SVLSIRWTQACL*FNNPKGNSKEY
Trigger: GTATTCCTTAGAATTGCCTTTAGGATTGTTGAATCATAAACATGCCTGTGTCCACCTTATGCTTAATACTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR TCA 72 bp ATTCATACATTTGACAATCACTGGGGAAGAGTTATCTaGTTTGTCTGTAAGGAAAAGCGAATGACTAATGCA +
Preference number: 3 (lower is better)
Translates to: IHTFDNHWGRVI*FVCKEKRMTNA
Trigger: TGCATTAGTCATTCGCTTTTCCTTACAGACAAATCAGATAACTCTTCCCCAGTGATTGTCAAATGTATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTCAGCCTGGTGGGAGATaGCGAGGACATTGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSQPGGR*RGHCPD
Trigger: GTCAGGGCAATGTCCTCGTCATCTCCCACCAGGCTG...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp GGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGCGCTGCACCAGGTCCTaGTATGACTCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GRCGGASAHSQCGLCCSWRCTRS*YDSPPG
Trigger: TCCTGGTGGGGAGTCATACCAGGACCTGGTGCAGCG...CCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp CGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGCTTTCCAGCTTGTGCCCCTaGGATGAGACGCCTCATAGC +
Preference number: 4 (lower is better)
Translates to: RCGGASAHSQCGLCCSWLSSLCP*DETPHS
Trigger: GCTATGAGGCGTCTCATCTCAGGGGCACAAGCTGGA...AAGCCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTCAGTGTGGTCTCTGCTaGAGTTGGCTTGTCACGGTG +
Preference number: 4 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSQCGLC*SWLVTV
Trigger: CACCGTGACAAGCCAACTGCAGCAGAGACCACACTG...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTCAGAGTCGGGGAGTTaGTCATGTAGGAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSSESGS*SCRRPM
Trigger: CATGGGCCTCCTACATGACCAACTCCCCGACTCTGA...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp CGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGCTTGCCGGCAAAGGTAAATaGTGCGAGGCTGGACGTGGA +
Preference number: 4 (lower is better)
Translates to: RCGGASAHSQCGLCCSWLAGKGK*CEAGRG
Trigger: TCCACGTCCAGCCTCGCACCATTTACCTTTGCCGGC...AAGCCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp CGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGCTTACGAGGACATTGCCCTaGCGTTCCAGCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: RCGGASAHSQCGLCCSWLTRTLP*RSSSMM
Trigger: CATCATGGAGCTGGAACGTCAGGGCAATGTCCTCGT...AAGCCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp TGTAAGGAAAAGCGAATGACTAATGCACTGAGGCGCTGGTCCATGACCCCGCCAGATCCCTCCCTGCCTTaGCCCCGGCGCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CKEKRMTNALRRWSMTPPDPSLP*PRRLPC
Trigger: ACAGGGCAGGCGCCGGGGCCAAGGCAGGGAGGGATC...TGGCGGGGTCATGGACCAGCGCCTCAGTGCATTAGTCATTCGCTTTTCCTTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp GGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGAAGATGCCCCAGACATaGCAGCTCTTCAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: GRCGGASAHSQCGLCCSWKMPQT*QLFRCQ
Trigger: CTGACATCTGAAGAGCTGCCATGTCTGGGGCATCTT...CCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTGTTGTTGTTCTGTTCTaGGGAAGATGCCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSVVVLF*GRCPRH
Trigger: ATGTCTGGGGCATCTTCCTCAGAACAGAACAACAAC...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCAACATGAGGGACGCTaGGGAGGGGCGTCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLQHEGR*GGASAH
Trigger: GTGCGCAGACGCCCCTCCGCAGCGTCCCTCATGTTG...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTATGGTCCTCTTCAACTaGCTTGTCCACACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSMVLFN*LVHTLR
Trigger: CCTCAAAGTGTGGACAAGCCAGTTGAAGAGGACCAT...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTTGTTTCTTGGCCTTTaGTGGGGACTCCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSLFLGL*WGLQSS
Trigger: ACTGGATTGGAGTCCCCACCAAAGGCCAAGAAACAA...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTGGCTTGTCCACACTTTaGGGTCTGTTATTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSGLSTL*GLLFPV
Trigger: AACAGGAAATAACAGACCTCAAAGTGTGGACAAGCC...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp CGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGCTTGGTTTTACCCCGGGCTaGCAAACCAATCATAACGAT +
Preference number: 4 (lower is better)
Translates to: RCGGASAHSQCGLCCSWLGFTPG*QTNHND
Trigger: ATCGTTATGATTGGTTTGCCAGCCCGGGGTAAAACC...AAGCCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp GTGACGTTTCTCCAGGCCTCGTTTTGGTGGCCCCCAAAGTCCAGTTCCCACTTAAATGCACTGAGGCGCTaGTCCATGACCCCGCCACCC +
Preference number: 4 (lower is better)
Translates to: VTFLQASFWWPPKSSSHLNALRR*SMTPPP
Trigger: GGGTGGCGGGGTCATGGACCAGCGCCTCAGTGCATT...TAAGTGGGAACTGGACTTTGGGGGCCACCAAAACGAGGCCTGGAGAAACGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCAGCCTGGTGGGAGATaGCGAGGACATTGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLQPGGR*RGHCPD
Trigger: GTCAGGGCAATGTCCTCGTCATCTCCCACCAGGCTG...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGCTAGTTGCTGGATGCTaGACCGCCTGCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKLVAGC*TACSPA
Trigger: AGCTGGGCTGCAGGCGGTTCAGCATCCAGCAACTAG...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp ATAGGACTTGACTGCTTCACGCCGATACACCCCAAGATTAAACACTTTGGTGGGGATCCCTCCCTGCCTTaGCCCCGGCGCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: IGLDCFTPIHPKIKHFGGDPSLP*PRRLPC
Trigger: ACAGGGCAGGCGCCGGGGCCAAGGCAGGGAGGGATC...CCCACCAAAGTGTTTAATCTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS-3UTR CCA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCGCTGCACCAGGTCCTaGTATGACTCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLRCTRS*YDSPPG
Trigger: TCCTGGTGGGGAGTCATACCAGGACCTGGTGCAGCG...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp ATAGGACTTGACTGCTTCACGCCGATACACCCCAAGATTAAACACTTTGGTGGGCTTGGCCCCGGCGCCTaGCCTGTAACGCGACCGAAC +
Preference number: 4 (lower is better)
Translates to: IGLDCFTPIHPKIKHFGGLGPGA*PVTRPN
Trigger: GTTCGGTCGCGTTACAGGGCAGGCGCCGGGGCCAAG...CCCACCAAAGTGTTTAATCTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS-3UTR GCA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGCTGCGGAGGGGCGTCTaGGCACAGCCAGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRLRRGV*AQPVWS
Trigger: AGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAG...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp GTGACGTTTCTCCAGGCCTCGTTTTGGTGGCCCCCAAAGTCCAGTTCCCACTTAGCCGGCAAAGGTAAATaGTGCGAGGCTGGACGTGGA +
Preference number: 4 (lower is better)
Translates to: VTFLQASFWWPPKSSSHLAGKGK*CEAGRG
Trigger: TCCACGTCCAGCCTCGCACCATTTACCTTTGCCGGC...TAAGTGGGAACTGGACTTTGGGGGCCACCAAAACGAGGCCTGGAGAAACGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp GGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGAGTTTGAAGATGGTATaGAGAGGGCATCTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: GRCGGASAHSQCGLCCSWSLKMV*RGHLKY
Trigger: ATACTTGAGATGCCCTCTCCATACCATCTTCAAACT...CCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCTCCAGGCCTCGTTTTaGTGGCCCCCAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLLQASF*WPPKSS
Trigger: ACTGGACTTTGGGGGCCACCAAAACGAGGCCTGGAG...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCGATCCCTCCCTGCCTTaGCCCCGGCGCCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLADPSLP*PRRLPC
Trigger: ACAGGGCAGGCGCCGGGGCCAAGGCAGGGAGGGATC...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GTGACGTTTCTCCAGGCCTCGTTTTGGTGGCCCCCAAAGTCCAGTTCCCACTTAGGTCTCTGCTGCAGTTaGCTTGTCACGGTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: VTFLQASFWWPPKSSSHLGLCCS*LVTVRV
Trigger: AACACGCACCGTGACAAGCCAACTGCAGCAGAGACC...TAAGTGGGAACTGGACTTTGGGGGCCACCAAAACGAGGCCTGGAGAAACGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp TGTAAGGAAAAGCGAATGACTAATGCACTGAGGCGCTGGTCCATGACCCCGCCAACGAGGACATTGCCCTaGCGTTCCAGCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: CKEKRMTNALRRWSMTPPTRTLP*RSSSMM
Trigger: CATCATGGAGCTGGAACGTCAGGGCAATGTCCTCGT...TGGCGGGGTCATGGACCAGCGCCTCAGTGCATTAGTCATTCGCTTTTCCTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp TTCCCATTAGGCAGGAGGGGAGGAAATATGGTGACGTTTCTCCAGGCCTCGTTTAGGACTGTATCATGGTaGCAGAGCCCACAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FPLGRRGGNMVTFLQASFRTVSW*QSPQRG
Trigger: GCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCT...AAACGAGGCCTGGAGAAACGTCACCATATTTCCTCCCCTCCTGCCTAATGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCCTTGGCCCCGGCGCCTaGCCTGTAACGCGACCGAAC +
Preference number: 4 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPLGPGA*PVTRPN
Trigger: GTTCGGTCGCGTTACAGGGCAGGCGCCGGGGCCAAG...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GGACACGTAGGTTTTACCCCGGGCTGGCAAACCAATCATAACGATCAGAGTCGGGCCACCAGAGCACATTaGGGATCTTCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GHVGFTPGWQTNHNDQSRATRAH*GSSWPP
Trigger: AGGAGGCCATGAAGATCCGCAATGTGCTCTGGTGGC...CCGACTCTGATCGTTATGATTGGTTTGCCAGCCCGGGGTAAAACCTACGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS-3UTR TCA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGTCTTCCCCAAGAGATTaGACTCGCTTTCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKSSPRD*TRFLHA
Trigger: GGCATGGAGAAAGCGAGTTCAATCTCTTGGGGAAGA...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp TTCCCATTAGGCAGGAGGGGAGGAAATATGGTGACGTTTCTCCAGGCCTCGTTTGGGGAGGAAATATGGTaGCGTTTCTCCAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: FPLGRRGGNMVTFLQASFGEEIW*RFSRPR
Trigger: ACGAGGCCTGGAGAAACGTCACCATATTTCCTCCCC...AAACGAGGCCTGGAGAAACGTCACCATATTTCCTCCCCTCCTGCCTAATGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp TCCTCAGTGAGATACGCCTTAACATCTTCCAGCGCCACCAGAGCACACTGTTTGTCGAAGGAGGAGTCTTaGATCCAGCTTGTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SSVRYALTSSSATRAHCLSKEES*IQLVPL
Trigger: CAGGGGCACAAGCTGGATTCAAGACTCCTCCTTCGA...CAAACAGTGTGCTCTGGTGGCGCTGGAAGATGTTAAGGCGTATCTCACTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGGTTGGCTTGTCACGGTaGGTGTTCACAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRVGLSR*VFTAST
Trigger: CGTGGAGGCTGTGAACACGCACCGTGACAAGCCAAC...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp TGCACCAGGTCCTGGTATGACTCCCCACCAGGATATCGATACAGATACTTCTCTGTTGGCTTGTCACGGTaGGTGTTCACAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: CTRSWYDSPPGYRYRYFSVGLSR*VFTAST
Trigger: CGTGGAGGCTGTGAACACGCACCGTGACAAGCCAAC...AGAGAAGTATCTGTATCGATATCCTGGTGGGGAGTCATACCAGGACCTGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp CTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGAGGTCGGTAGGTCAACATGAGGGACGCTaGGGAGGGGCGTCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: LDERKILVIVVWVKRSVGQHEGR*GGASAH
Trigger: GTGCGCAGACGCCCCTCCGCAGCGTCCCTCATGTTG...ACCTACCGACCTCTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTAAGATGCCCCAGACATaGCAGCTCTTCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLKMPQT*QLFRCP
Trigger: AGGACATCTGAAGAGCTGCCATGTCTGGGGCATCTT...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp GTTGGTCATGTAGGAGGCCCATGCTATAGTCCCAGCTACTCAGGAGGATTGCTTTCAGAGTCGGGGAGTTaGTCATGTAGGAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: VGHVGGPCYSPSYSGGLLSESGS*SCRRPM
Trigger: CATGGGCCTCCTACATGACCAACTCCCCGACTCTGA...AAGCAATCCTCCTGAGTAGCTGGGACTATAGCATGGGCCTCCTACATGACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS-3UTR CCA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTATCATTCTCACACTGGTaGTGGTGGGGGCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLSFSHW*WWGHPH
Trigger: ATGGGGATGCCCCCACCACCACCAGTGTGAGAATGA...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGGCTCGCCTGGAACAGTaGCAGAGACCAGCTCTTACC +
Preference number: 4 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRARLEQ*QRPALT
Trigger: GGTAAGAGCTGGTCTCTGCCACTGTTCCAGGCGAGC...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGTCTAGCCTGCTCGCCTaGAACAGTGGCAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRSSLLA*NSGRDQ
Trigger: CTGGTCTCTGCCACTGTTCCAGGCGAGCAGGCTAGA...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR CAA 72 bp GGGAGGAAATATGGTGACGTTTCTCCAGGCCTCGTTTaGGTGGCCCCCAAAGTCCAGTTCCCACTTAACTTC +
Preference number: 4 (lower is better)
Translates to: GRKYGDVSPGLV*VAPKVQFPLNF
Trigger: GAAGTTAAGTGGGAACTGGACTTTGGGGGCCACCAAAACGAGGCCTGGAGAAACGTCACCATATTTCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp GTGACGTTTCTCCAGGCCTCGTTTTGGTGGCCCCCAAAGTCCAGTTCCCACTTAGTTGTTGTTCTGTTCTaGGGAAGATGCCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: VTFLQASFWWPPKSSSHLVVVLF*GRCPRH
Trigger: ATGTCTGGGGCATCTTCCTCAGAACAGAACAACAAC...TAAGTGGGAACTGGACTTTGGGGGCCACCAAAACGAGGCCTGGAGAAACGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp AGTCGGGGAGTTGGTCATGTAGGAGGCCCATGCTATAGTCCCAGCTACTCAGGAGTTGTTGTTCTGTTCTaGGGAAGATGCCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: SRGVGHVGGPCYSPSYSGVVVLF*GRCPRH
Trigger: ATGTCTGGGGCATCTTCCTCAGAACAGAACAACAAC...TCCTGAGTAGCTGGGACTATAGCATGGGCCTCCTACATGACCAACTCCCCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS-3UTR TCA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGTCAAACACCGCAATCTaGCCATTCTCCTCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKSNTAI*PFSSVR
Trigger: TCTCACTGAGGAGAATGGTCAGATTGCGGTGTTTGA...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp ATTCTCCTCAGTGAGATACGCCTTAACATCTTCCAGCGCCACCAGAGCACACTGAGTCGTTTGGAGAGGTaGGGCCTGAACATCCACATC +
Preference number: 4 (lower is better)
Translates to: ILLSEIRLNIFQRHQSTLSRLER*GLNIHI
Trigger: GATGTGGATGTTCAGGCCTCACCTCTCCAAACGACT...CAGTGTGCTCTGGTGGCGCTGGAAGATGTTAAGGCGTATCTCACTGAGGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp TGTAAGGAAAAGCGAATGACTAATGCACTGAGGCGCTGGTCCATGACCCCGCCACCCCATCTTGATGCATaGGAGGCACATGCATCAAGT +
Preference number: 4 (lower is better)
Translates to: CKEKRMTNALRRWSMTPPPHLDA*EAHASS
Trigger: ACTTGATGCATGTGCCTCTCATGCATCAAGATGGGG...TGGCGGGGTCATGGACCAGCGCCTCAGTGCATTAGTCATTCGCTTTTCCTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGCAGTGTGGTCTCTGCTaGAGTTGGCTTGTCACGGTG +
Preference number: 4 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRQCGLC*SWLVTV
Trigger: CACCGTGACAAGCCAACTGCAGCAGAGACCACACTG...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCAGCCAGTGTGGTCTCTaGTGCAGTTGGCTTGTCACG +
Preference number: 4 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCSQCGL*CSWLVT
Trigger: CGTGACAAGCCAACTGCAGCAGAGACCACACTGGCT...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTTGCTACTCACCCTTTTaGCCAGCAAGTGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLCYSPF*PASEHL
Trigger: CAAATGCTCACTTGCTGGGCAAAAGGGTGAGTAGCA...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp TGTAAGGAAAAGCGAATGACTAATGCACTGAGGCGCTGGTCCATGACCCCGCCATCTCCCGGGTTGTATTaGTGGCATCAAACACCGCAA +
Preference number: 4 (lower is better)
Translates to: CKEKRMTNALRRWSMTPPSPGLY*WHQTPQ
Trigger: TTGCGGTGTTTGATGCCACCAATACAACCCGGGAGA...TGGCGGGGTCATGGACCAGCGCCTCAGTGCATTAGTCATTCGCTTTTCCTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAAGCCGGCAAAGGTAAATaGTGCGAGGCTGGACGTGGA +
Preference number: 4 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKAGKGK*CEAGRG
Trigger: TCCACGTCCAGCCTCGCACCATTTACCTTTGCCGGC...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGATGGTCCTCTTCAACTaGCTTGTCCACACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKMVLFN*LVHTLR
Trigger: CCTCAAAGTGTGGACAAGCCAGTTGAAGAGGACCAT...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp AAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGTGCGCACAGCCAGTGTaGTCTCTGCTGCAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: KEVVGLIGLDCFTPIHPKCAQPV*SLLQLA
Trigger: AGCCAACTGCAGCAGAGACCACACTGGCTGTGCGCA...CTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp TCCTCCAGAAATTTCCTTAGAGCTTGGGCAAACTGCTTTCCCCGCACCGAGAGGGATGGCCCCACCAAATaGGACTTGTTTCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SSRNFLRAWANCFPRTERDGPTK*DLFLGL
Trigger: AAGGCCAAGAAACAAGTCCCATTTGGTGGGGCCATC...CCTCTCGGTGCGGGGAAAGCAGTTTGCCCAAGCTCTAAGGAAATTTCTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp TTCCCATTAGGCAGGAGGGGAGGAAATATGGTGACGTTTCTCCAGGCCTCGTTTAGTCCTGGACTCTGTTaGCTAAAAATCGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FPLGRRGGNMVTFLQASFSPGLC*LKIAGP
Trigger: TGGGCCAGCGATTTTTAGTCAACAGAGTCCAGGACT...AAACGAGGCCTGGAGAAACGTCACCATATTTCCTCCCCTCCTGCCTAATGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp TCCTCAGTGAGATACGCCTTAACATCTTCCAGCGCCACCAGAGCACACTGTTTGAGTCCTGGACTCTGTTaGCTAAAAATCGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSVRYALTSSSATRAHCLSPGLC*LKIAGP
Trigger: TGGGCCAGCGATTTTTAGTCAACAGAGTCCAGGACT...CAAACAGTGTGCTCTGGTGGCGCTGGAAGATGTTAAGGCGTATCTCACTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp ACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTCAGCCTGGTGGGAGATaGCGAGGACATTGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: TMQPCKSAKHASPTISHSQPGGR*RGHCPD
Trigger: GTCAGGGCAATGTCCTCGTCATCTCCCACCAGGCTG...AGAATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp ATTCTCCTCAGTGAGATACGCCTTAACATCTTCCAGCGCCACCAGAGCACACTGTGGAGAGGTGAGGCCTaGACATCCACATCATTAGCA +
Preference number: 4 (lower is better)
Translates to: ILLSEIRLNIFQRHQSTLWRGEA*TSTSLA
Trigger: TGCTAATGATGTGGATGTTCAGGCCTCACCTCTCCA...CAGTGTGCTCTGGTGGCGCTGGAAGATGTTAAGGCGTATCTCACTGAGGAGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCACATCAGCCCCATCTTaGTGCATGAGAGGCACATGC +
Preference number: 4 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCTSAPS*CMRGTC
Trigger: GCATGTGCCTCTCATGCATCAAGATGGGGCTGATGT...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCCCAGAGCACACTGTTTaGGGATCTTCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCPEHTV*GSSWPP
Trigger: AGGAGGCCATGAAGATCCGCAAACAGTGTGCTCTGG...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp ATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGAGCCAGTGTGGTCTCTaGTGCAGTTGGCTTGTCACG +
Preference number: 4 (lower is better)
Translates to: IVMPKEVVGLIGLDCFTPSQCGL*CSWLVT
Trigger: CGTGACAAGCCAACTGCAGCAGAGACCACACTGGCT...CGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp ACATCAGGATCATCACAGACGGATTCCACAAAGAATACCTTGAAGGAATTCTGTCTGCGGAGGGGCGTCTaGGCACAGCCAGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: TSGSSQTDSTKNTLKEFCLRRGV*AQPVWS
Trigger: AGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAG...ACAGAATTCCTTCAAGGTATTCTTTGTGGAATCCGTCTGTGATGATCCTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCGTATCAGGAGACTACTaGCCTCCAAGTCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCVSGDY*PPSHSH
Trigger: GTGGCTGTGACTTGGAGGGCAGTAGTCTCCTGATAC...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp TGTAAGGAAAAGCGAATGACTAATGCACTGAGGCGCTGGTCCATGACCCCGCCACTTGTCATAGTTGTCTaGGTCAAGAGGTCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: CKEKRMTNALRRWSMTPPLVIVV*VKRSVG
Trigger: ACCTACCGACCTCTTGACCCAGACAACTATGACAAG...TGGCGGGGTCATGGACCAGCGCCTCAGTGCATTAGTCATTCGCTTTTCCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp TCCTCCAGAAATTTCCTTAGAGCTTGGGCAAACTGCTTTCCCCGCACCGAGAGGAATTTCCTTAGAGCTTaGGCAAACTGCTTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: SSRNFLRAWANCFPRTERNFLRA*ANCFPR
Trigger: GCGGGGAAAGCAGTTTGCCCAAGCTCTAAGGAAATT...CCTCTCGGTGCGGGGAAAGCAGTTTGCCCAAGCTCTAAGGAAATTTCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGATTCAGCAGTCTGTATaGTCCTCTTCAACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKIQQSV*SSSTGL
Trigger: CAAGCCAGTTGAAGAGGACCATACAGACTGCTGAAT...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp AAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTCGCTGCACCAGGTCCTaGTATGACTCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: KKRLNAHLGYRCHHPSKCRCTRS*YDSPPG
Trigger: TCCTGGTGGGGAGTCATACCAGGACCTGGTGCAGCG...ACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTGCAGGAGGCCAGGGCTaGAGGGAAACACACAGTTAC +
Preference number: 4 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLIAGGQG*RETHSY
Trigger: GTAACTGTGTGTTTCCCTCCAGCCCTGGCCTCCTGC...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp AAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGGGTCTCTGCTGCAGTTaGCTTGTCACGGTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: KEVVGLIGLDCFTPIHPKGLCCS*LVTVRV
Trigger: AACACGCACCGTGACAAGCCAACTGCAGCAGAGACC...CTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGTGCGCACAGCCAGTGTaGTCTCTGCTGCAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMCAQPV*SLLQLA
Trigger: AGCCAACTGCAGCAGAGACCACACTGGCTGTGCGCA...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp TTCCCATTAGGCAGGAGGGGAGGAAATATGGTGACGTTTCTCCAGGCCTCGTTTCACAATAGTGACCAGTaGCCAAGAGGCAGGTATCAG +
Preference number: 4 (lower is better)
Translates to: FPLGRRGGNMVTFLQASFHNSDQ*PRGRYQ
Trigger: CTGATACCTGCCTCTTGGCCACTGGTCACTATTGTG...AAACGAGGCCTGGAGAAACGTCACCATATTTCCTCCCCTCCTGCCTAATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp CAAACCAATCATAACGATCAGAGTCGGGGAGTTGGTCATGTAGGAGGCCCATGCCATTGCGGATCTTCATaGCCTCCTCATTGTCATGCC +
Preference number: 4 (lower is better)
Translates to: QTNHNDQSRGVGHVGGPCHCGSS*PPHCHA
Trigger: GGCATGACAATGAGGAGGCCATGAAGATCCGCAATG...GCATGGGCCTCCTACATGACCAACTCCCCGACTCTGATCGTTATGATTGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS-3UTR TCA 90 bp TGCACCAGGTCCTGGTATGACTCCCCACCAGGATATCGATACAGATACTTCTCTTCTTCCCCAAGAGATTaGACTCGCTTTCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: CTRSWYDSPPGYRYRYFSSSPRD*TRFLHA
Trigger: GGCATGGAGAAAGCGAGTTCAATCTCTTGGGGAAGA...AGAGAAGTATCTGTATCGATATCCTGGTGGGGAGTCATACCAGGACCTGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp GAAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGACACCACCGGAATGCTaGCTTGGGTCTTCGGCTAGT +
Preference number: 4 (lower is better)
Translates to: EEKTECPFGLQMPPSKQMTPPEC*LGSSAS
Trigger: ACTAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGT...CATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp AAGCAAATGTGGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCCCAGAGCACACTGTTTaGGGATCTTCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KQMWTMQPCKSAKHASPTPEHTV*GSSWPP
Trigger: AGGAGGCCATGAAGATCCGCAAACAGTGTGCTCTGG...GGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp AAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTGTTGGCTTGTCACGGTaGGTGTTCACAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: KKRLNAHLGYRCHHPSKCVGLSR*VFTAST
Trigger: CGTGGAGGCTGTGAACACGCACCGTGACAAGCCAAC...ACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp ATAGAGAAATACAAACAGTTACGAGCTAGATCCCACAGGGTTCCAAGGACTTCTTTTTTGTCCCCCGACTaGTCACCCGCCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: IEKYKQLRARSHRVPRTSFLSPD*SPALHP
Trigger: GGGATGGAGGGCGGGTGAGCAGTCGGGGGACAAAAA...AGAAGTCCTTGGAACCCTGTGGGATCTAGCTCGTAACTGTTTGTATTTCTCTAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTAGCAGCCTTTAGAAGCTaGCTATGGTATCCTACTTGG +
Preference number: 4 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLAAFRS*LWYPTW
Trigger: CCAAGTAGGATACCATAGGCAGCTTCTAAAGGCTGC...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTGTGGAACTGAAGTCCTaGCCTAAAGCAGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLIVELKS*PKAGDW
Trigger: CCAGTCCCCTGCTTTAGGGCAGGACTTCAGTTCCAC...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GAAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTCAGAGTCGGGGAGTTaGTCATGTAGGAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: EEKTECPFGLQMPPSKQMSESGS*SCRRPM
Trigger: CATGGGCCTCCTACATGACCAACTCCCCGACTCTGA...CATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTAGGTTTTACCCCGGGCTaGCAAACCAATCATAACGAT +
Preference number: 4 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLGFTPG*QTNHND
Trigger: ATCGTTATGATTGGTTTGCCAGCCCGGGGTAAAACC...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GGTAGCGTGTTAGTTTCTTGGACACGTAGGTTTTACCCCGGGCTGGCAAACCAAGGTTTTACCCCGGGCTaGCAAACCAATCATAACGAT +
Preference number: 4 (lower is better)
Translates to: GSVLVSWTRRFYPGLANQGFTPG*QTNHND
Trigger: ATCGTTATGATTGGTTTGCCAGCCCGGGGTAAAACC...TTGGTTTGCCAGCCCGGGGTAAAACCTACGTGTCCAAGAAACTAACACGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS-3UTR CCA 90 bp GGACACGTAGGTTTTACCCCGGGCTGGCAAACCAATCATAACGATCAGAGTCGGAGCGTGTTAGTTTCTTaGACACGTAGGTTTTACCCC +
Preference number: 4 (lower is better)
Translates to: GHVGFTPGWQTNHNDQSRSVLVS*TRRFYP
Trigger: GGGGTAAAACCTACGTGTCCAAGAAACTAACACGCT...CCGACTCTGATCGTTATGATTGGTTTGCCAGCCCGGGGTAAAACCTACGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS-3UTR CCA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGGTTTGCGGATCTTCATaGCCTCCTCATTGTCATGCC +
Preference number: 4 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRVCGSS*PPHCHA
Trigger: GGCATGACAATGAGGAGGCCATGAAGATCCGCAAAC...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTTTGACTAAAAATCGCTaGCCCACGTTTATCACCTTG +
Preference number: 4 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLLTKNR*PTFITL
Trigger: CAAGGTGATAAACGTGGGCCAGCGATTTTTAGTCAA...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGAAGTGCAAACTCTTCTaGGTACCGTTTCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKKCKLF*VPFLNL
Trigger: GAGATTGAGAAACGGTACCCAGAAGAGTTTGCACTT...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCGGATGTCCTGTAGTCTaGGCTGGCCCTTACAGGACC +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLAGCPVV*AGPYRT
Trigger: GGTCCTGTAAGGGCCAGCCCAGACTACAGGACATCC...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp ATAGAGAAATACAAACAGTTACGAGCTAGATCCCACAGGGTTCCAAGGACTTCTTTCTCACACTGGTGGTaGTGGGGGCATCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: IEKYKQLRARSHRVPRTSFSHWW*WGHPHP
Trigger: GGGATGGGGATGCCCCCACCACCACCAGTGTGAGAA...AGAAGTCCTTGGAACCCTGTGGGATCTAGCTCGTAACTGTTTGTATTTCTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CAA 72 bp TTCCCAACCACCCAGGAGAACCACATCAGCCCCATCTaGATGCATGAGAGGCACATGCATCAAGTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: FPTTQENHISPI*MHERHMHQVKS
Trigger: ACTTTTGACTTGATGCATGTGCCTCTCATGCATCAAGATGGGGCTGATGTGGTTCTCCTGGGTGGTTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTAGATTGGCAAAGAACCTaGGAGTCATGGGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLDWQRT*ESWEKR
Trigger: TCTTTTCTCCCATGACTCTCAGGTTCTTTGCCAATC...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp AAGCAAATGTGGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCCCCTGGACACAATTCTaGCATCTGTGTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: KQMWTMQPCKSAKHASPTPWTQF*HLCHLQ
Trigger: CTGAAGGTGACACAGATGTCAGAATTGTGTCCAGGG...GGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp TGTAAGGAAAAGCGAATGACTAATGCACTGAGGCGCTGGTCCATGACCCCGCCAAGATGTTTTAGGGACTaGATTTCTCAGAAGACCCTC +
Preference number: 4 (lower is better)
Translates to: CKEKRMTNALRRWSMTPPRCFRD*ISQKTL
Trigger: GAGGGTCTTCTGAGAAATTCAGTCCCTAAAACATCT...TGGCGGGGTCATGGACCAGCGCCTCAGTGCATTAGTCATTCGCTTTTCCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTACCCCACCAGTGCTaGAACCCGACTCAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLILPHQC*NPTQLL
Trigger: TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAG...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGAAAGCAGCTCCTAGTTaGTGGATGCTGAACCGCCTG +
Preference number: 4 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMKAAPS*WMLNRL
Trigger: CAGGCGGTTCAGCATCCAGCAACTAGGAGCTGCTTT...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAAAAGATGCCCCAGACATaGCAGCTCTTCAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKKMPQT*QLFRCP
Trigger: AGGACATCTGAAGAGCTGCCATGTCTGGGGCATCTT...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCGGTTTTACCCCGGGCTaGCAAACCAATCATAACGAT +
Preference number: 4 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCGFTPG*QTNHND
Trigger: ATCGTTATGATTGGTTTGCCAGCCCGGGGTAAAACC...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp ATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGGTTTGCGGATCTTCATaGCCTCCTCATTGTCATGCC +
Preference number: 4 (lower is better)
Translates to: IVMPKEVVGLIGLDCFTPVCGSS*PPHCHA
Trigger: GGCATGACAATGAGGAGGCCATGAAGATCCGCAAAC...CGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp ATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGTCTCCCGGGTTGTATTaGTGGCATCAAACACCGCAA +
Preference number: 4 (lower is better)
Translates to: IVMPKEVVGLIGLDCFTPSPGLY*WHQTPQ
Trigger: TTGCGGTGTTTGATGCCACCAATACAACCCGGGAGA...CGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCAATTTCCTTAGAGCTTaGGCAAACTGCTTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCNFLRA*ANCFPR
Trigger: GCGGGGAAAGCAGTTTGCCCAAGCTCTAAGGAAATT...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp TCCTCAGTGAGATACGCCTTAACATCTTCCAGCGCCACCAGAGCACACTGTTTGATTCAGCAGTCTGTATaGTCCTCTTCAACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSVRYALTSSSATRAHCLIQQSV*SSSTGL
Trigger: CAAGCCAGTTGAAGAGGACCATACAGACTGCTGAAT...CAAACAGTGTGCTCTGGTGGCGCTGGAAGATGTTAAGGCGTATCTCACTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp TCCTCCAGAAATTTCCTTAGAGCTTGGGCAAACTGCTTTCCCCGCACCGAGAGGAAGTGCAAACTCTTCTaGGTACCGTTTCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: SSRNFLRAWANCFPRTERKCKLF*VPFLNL
Trigger: GAGATTGAGAAACGGTACCCAGAAGAGTTTGCACTT...CCTCTCGGTGCGGGGAAAGCAGTTTGCCCAAGCTCTAAGGAAATTTCTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTAGTTTGAAGATGGTATaGAGAGGGCATCTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLSLKMV*RGHLKY
Trigger: ATACTTGAGATGCCCTCTCCATACCATCTTCAAACT...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp ATAGAGAAATACAAACAGTTACGAGCTAGATCCCACAGGGTTCCAAGGACTTCTTCCTGTAGTCTGGGCTaGCCCTTACAGGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: IEKYKQLRARSHRVPRTSSCSLG*PLQDLA
Trigger: AGCCAGGTCCTGTAAGGGCCAGCCCAGACTACAGGA...AGAAGTCCTTGGAACCCTGTGGGATCTAGCTCGTAACTGTTTGTATTTCTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp ATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGCAGATGTCAGAACCGTaGTCCCAGCAGACAACTCTT +
Preference number: 4 (lower is better)
Translates to: IVMPKEVVGLIGLDCFTPQMSEP*SQQTTL
Trigger: AAGAGTTGTCTGCTGGGACCACGGTTCTGACATCTG...CGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR CAA 72 bp AGCTACAAAAGGGAACTTAGAAGATGGGTACCCATTTaGGGGAGTCTTGCAGTCAGATCCTGTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SYKRELRRWVPI*GSLAVRSCPEG
Trigger: CCCTTCAGGACAGGATCTGACTGCAAGACTCCCCAAAATGGGTACCCATCTTCTAAGTTCCCTTTTGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp ATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGTCAAACACCGCAATCTaGCCATTCTCCTCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: IVMPKEVVGLIGLDCFTPSNTAI*PFSSVR
Trigger: TCTCACTGAGGAGAATGGTCAGATTGCGGTGTTTGA...CGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCAGGATAGTCAGGGCTTaGTACCTTAACCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCRIVRA*YLNLQN
Trigger: ATTCTGGAGGTTAAGGTATCAAGCCCTGACTATCCT...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp TGCACCAGGTCCTGGTATGACTCCCCACCAGGATATCGATACAGATACTTCTCTAGGATAGTCAGGGCTTaGTACCTTAACCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: CTRSWYDSPPGYRYRYFSRIVRA*YLNLQN
Trigger: ATTCTGGAGGTTAAGGTATCAAGCCCTGACTATCCT...AGAGAAGTATCTGTATCGATATCCTGGTGGGGAGTCATACCAGGACCTGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTTCTTCCCCAAGAGATTaGACTCGCTTTCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLISSPRD*TRFLHA
Trigger: GGCATGGAGAAAGCGAGTTCAATCTCTTGGGGAAGA...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp TGTAAGGAAAAGCGAATGACTAATGCACTGAGGCGCTGGTCCATGACCCCGCCATGGGGAAGAGTTATCTaGTTTGTCTGTAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: CKEKRMTNALRRWSMTPPWGRVI*FVCKEK
Trigger: CTTTTCCTTACAGACAAATCAGATAACTCTTCCCCA...TGGCGGGGTCATGGACCAGCGCCTCAGTGCATTAGTCATTCGCTTTTCCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp ATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGCTCTTGATCTCGAAGTaGAAACTCTTCTGGGTACCG +
Preference number: 4 (lower is better)
Translates to: IVMPKEVVGLIGLDCFTPLLISK*KLFWVP
Trigger: CGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAG...CGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCATTCTACCCCACCAGTaGTGCAACCCGACTCAGTTG +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLILPHQ*CNPTQL
Trigger: CAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAAT...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTTATCATTACTTTTCTTaGTACTCACCCTTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLYHYFS*YSPFCP
Trigger: TGGGCAAAAGGGTGAGTAGCAAGAAAAGTAATGATA...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGAGCGTGTTAGTTTCTTaGACACGTAGGTTTTACCCC +
Preference number: 4 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRSVLVS*TRRFYP
Trigger: GGGGTAAAACCTACGTGTCCAAGAAACTAACACGCT...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp AAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGCTTGTCATAGTTGTCTaGGTCAAGAGGTCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: KEVVGLIGLDCFTPIHPKLVIVV*VKRSVG
Trigger: ACCTACCGACCTCTTGACCCAGACAACTATGACAAG...CTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTAGCCCCAGAGGATACTaGCTTTGGCAGGAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLISPRGY*LWQEKL
Trigger: CAACTTTTCCTGCCAAAGCCAGTATCCTCTGGGGCT...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTATCTGAAGACCAAATGTaGGTTGCAAAGAGGATTACC +
Preference number: 4 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLSEDQM*VAKRIT
Trigger: GGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGA...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCCTCTTGCTTCCAATGTaGCAAATGGTAACTGCTAGC +
Preference number: 4 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCLLLPM*QMVTAS
Trigger: GCTAGCAGTTACCATTTGCCACATTGGAAGCAAGAG...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCAGGGAACTTAGAAGATaGGTACCCATTTTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCRELRR*VPILGS
Trigger: ACTCCCCAAAATGGGTACCCATCTTCTAAGTTCCCT...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGCCTCCATTCACCTGGTaGTTTGTCTCTTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMPPFTW*FVSCFQ
Trigger: TTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGG...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp TGTAAGGAAAAGCGAATGACTAATGCACTGAGGCGCTGGTCCATGACCCCGCCAATACATTCATACATTTaGCAATCACTGGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: CKEKRMTNALRRWSMTPPIHSYI*QSLGKS
Trigger: ACTCTTCCCCAGTGATTGTCAAATGTATGAATGTAT...TGGCGGGGTCATGGACCAGCGCCTCAGTGCATTAGTCATTCGCTTTTCCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp ATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGAGCAGCAAAATAATATaGTGGCCCCACCAAATGGGA +
Preference number: 4 (lower is better)
Translates to: IVMPKEVVGLIGLDCFTPSSKII*WPHQMG
Trigger: TCCCATTTGGTGGGGCCATCATATTATTTTGCTGCT...CGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp CTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGAGGTCGGTAGGTCTTATAGGACTTGACTaGTTCACGCCGATACACCCC +
Preference number: 4 (lower is better)
Translates to: LDERKILVIVVWVKRSVGLIGLD*FTPIHP
Trigger: GGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAG...ACCTACCGACCTCTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp AAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGGGTAGTAGACTATCTTaGTCTGGATGTAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KEVVGLIGLDCFTPIHPKGSRLS*SGCSPG
Trigger: TCCAGGACTACATCCAGAGCAAGATAGTCTACTACC...CTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGCTCTTGATCTCGAAGTaGAAACTCTTCTGGGTACCG +
Preference number: 4 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMLLISK*KLFWVP
Trigger: CGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAG...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp CCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTTGTCCTATAAACCAAGAGTGTGGGGCATaGTCAGCCCCAAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: PWVKRCFKLKNSLSCPINQECGA*SAPREC
Trigger: ACACTCCCTTGGGGCTGAGCATGCCCCACACTCTTG...GTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp AAGCAAATGTGGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCGACACCACAATGCCATaGATTACACTGGACAATCCA +
Preference number: 4 (lower is better)
Translates to: KQMWTMQPCKSAKHASPTDTTMP*ITLDNP
Trigger: TGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTC...GGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCCAGATGAAAATCATCTaGTACAGGGTAAGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCQMKII*YRVRSL
Trigger: AAGGCTCCTTACCCTGTAGCAGATGATTTTCATCTG...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp AAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGCCAGCAGACAACTCTTaGCTCTTTACTAGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: KEVVGLIGLDCFTPIHPKPADNS*LFTSVY
Trigger: GTACACACTAGTAAAGAGGCAAGAGTTGTCTGCTGG...CTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTGTTTGCGGATCTTCATaGCCTCCTCATTGTCATGCC +
Preference number: 4 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCVCGSS*PPHCHA
Trigger: GGCATGACAATGAGGAGGCCATGAAGATCCGCAAAC...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCTCTCCCGGGTTGTATTaGTGGCATCAAACACCGCAA +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLASPGLY*WHQTPQ
Trigger: TTGCGGTGTTTGATGCCACCAATACAACCCGGGAGA...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp AAGCAAATGTGGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATTCAGCAGTCTGTATaGTCCTCTTCAACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: KQMWTMQPCKSAKHASPTIQQSV*SSSTGL
Trigger: CAAGCCAGTTGAAGAGGACCATACAGACTGCTGAAT...GGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCGGGGAAGTTGTTAGTTaGCTTGTCACGGTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPGEVVS*LVTVRV
Trigger: AACACGCACCGTGACAAGCCAACTAACAACTTCCCC...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTTGTCCTATAAACGGCCCTTACAGGACCTaGCTGGAGAGGAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PWVKRCFKLKNSLSCPINGPYRT*LERKGE
Trigger: TTCTCCCTTCCTCTCCAGCCAGGTCCTGTAAGGGCC...GTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCCAGAACAGGGTAAGCTaGGGACACAGAAGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLAQNRVS*GHRSFR
Trigger: TCTGAAGCTTCTGTGTCCCCAGCTTACCCTGTTCTG...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp TCTCAAGGAGCTTTCTTGACTTACTCACGTGATATAAATGGCACTCTACTTTTCCAGGCCTCGTTTTGGTaGCCCCCAAAGTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SQGAFLTYSRDINGTLLFQASFW*PPKSSS
Trigger: GGAACTGGACTTTGGGGGCCACCAAAACGAGGCCTG...GAAAAGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367079.3
3UTR CAA 72 bp CTTACCTCACAGCAGAAGAAAAGACTGAATGCCCATTaGGGCTACAGATGCCACCATCCAAGCAAATGTGGA +
Preference number: 4 (lower is better)
Translates to: LTSQQKKRLNAH*GYRCHHPSKCG
Trigger: TCCACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTTCTGCTGTGAGGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCGTTGTTGTTCTGTTCTaGGGAAGATGCCCCAGACAT +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLAVVVLF*GRCPRH
Trigger: ATGTCTGGGGCATCTTCCTCAGAACAGAACAACAAC...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTAGGATAGTCAGGGCTTaGTACCTTAACCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLIRIVRA*YLNLQN
Trigger: ATTCTGGAGGTTAAGGTATCAAGCCCTGACTATCCT...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGGGCTTGTCCACACTTTaGGGTCTGTTATTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMGLSTL*GLLFPV
Trigger: AACAGGAAATAACAGACCTCAAAGTGTGGACAAGCC...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp GAAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGGGCTTGTCCACACTTTaGGGTCTGTTATTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: EEKTECPFGLQMPPSKQMGLSTL*GLLFPV
Trigger: AACAGGAAATAACAGACCTCAAAGTGTGGACAAGCC...CATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCAAATGCCAGTGTCTCTaGAGACCAAATGTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLKCQCL*RPNVGC
Trigger: GCAACCCACATTTGGTCTTCAGAGACACTGGCATTT...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp CACGTTTATCACCTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGCCAGAGCACACTGTTTaGGGATCTTCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HVYHLDERKILVIVVWVKPEHTV*GSSWPP
Trigger: AGGAGGCCATGAAGATCCGCAAACAGTGTGCTCTGG...CTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAGGTGATAAACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGGGTAGTAGACTATCTTaGTCTGGATGTAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMGSRLS*SGCSPG
Trigger: TCCAGGACTACATCCAGAGCAAGATAGTCTACTACC...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAACCGTTTCTCAATCTCTaGATAGGTCATCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKPFLNL*IGHLFT
Trigger: TGTGAAGAGATGACCTATGCAGAGATTGAGAAACGG...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp AAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTCTCTTGATCTCGAAGTaGAAACTCTTCTGGGTACCG +
Preference number: 4 (lower is better)
Translates to: KKRLNAHLGYRCHHPSKCLLISK*KLFWVP
Trigger: CGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAG...ACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCAAGACATTTCCCACATaGTCAGAGCCAGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLKTFPT*SEPDSP
Trigger: GGGAGAATCTGGCTCTGAGCATGTGGGAAATGTCTT...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCACTCCTGAATCTAACTaGCCTTCTAAACAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLTPESN*PSKQPQ
Trigger: CTGGGGCTGTTTAGAAGGGCAGTTAGATTCAGGAGT...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GAAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGCATTTGGGCTACAGATaGCACCATCCAAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: EEKTECPFGLQMPPSKQMHLGYR*HHPSKC
Trigger: ACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATG...CATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp TCTCAAGGAGCTTTCTTGACTTACTCACGTGATATAAATGGCACTCTACTTTTCTCAGAGTCGGGGAGTTaGTCATGTAGGAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: SQGAFLTYSRDINGTLLFSESGS*SCRRPM
Trigger: CATGGGCCTCCTACATGACCAACTCCCCGACTCTGA...GAAAAGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCCTTGTCATAGTTGTCTaGGTCAAGAGGTCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLLVIVV*VKRSVG
Trigger: ACCTACCGACCTCTTGACCCAGACAACTATGACAAG...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCATGGTCCTCTTCAACTaGCTTGTCCACACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLMVLFN*LVHTLR
Trigger: CCTCAAAGTGTGGACAAGCCAGTTGAAGAGGACCAT...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCTGCCATGCATTACACTaGACAATCCAGAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLACHALH*TIQRGH
Trigger: ATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCA...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp ATAGAGAAATACAAACAGTTACGAGCTAGATCCCACAGGGTTCCAAGGACTTCTCAACCTTTATCATCCTaGCAGGGTCTGCACCTCTCT +
Preference number: 4 (lower is better)
Translates to: IEKYKQLRARSHRVPRTSQPLSS*QGLHLS
Trigger: AGAGAGGTGCAGACCCTGCCAGGATGATAAAGGTTG...AGAAGTCCTTGGAACCCTGTGGGATCTAGCTCGTAACTGTTTGTATTTCTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAACATTCTACATTCTCCTaGCTTCTTCCTGCTAGACTT +
Preference number: 4 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKHSTFS*LLPARL
Trigger: AAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATG...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp AAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTCTATATTGCCCAGGCTaGTCTCAAGTGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KKRLNAHLGYRCHHPSKCLYCPG*SQVILL
Trigger: CAGGAGAATCACTTGAGACCAGCCTGGGCAATATAG...ACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAATCCTGGTCTACCAGTTaGTCAACATATAGACACTAC +
Preference number: 4 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKSWSTS*STYRHY
Trigger: GTAGTGTCTATATGTTGACCAACTGGTAGACCAGGA...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGAGGTCGGTAGGTCCGTCTTGGAGGCTATaGAGCTGGATCAACTTCATT +
Preference number: 4 (lower is better)
Translates to: LDERKILVIVVWVKRSVGPSWRL*SWINFI
Trigger: AATGAAGTTGATCCAGCTCCATAGCCTCCAAGACGG...ACCTACCGACCTCTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR CAA 72 bp CTCAGAAGACCCTCCATTCACCTGGTGATTTGTCTCTaGCTTCCAATGTGGCAAATGGTAACTGCTAGCATA +
Preference number: 4 (lower is better)
Translates to: LRRPSIHLVICL*LPMWQMVTASI
Trigger: TATGCTAGCAGTTACCATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp ATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGTACAGATACTTCTCTTaGTCTCGAAGTGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: IVMPKEVVGLIGLDCFTPYRYFS*SRSANS
Trigger: AGAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTA...CGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCCAGGAAAAGTTGCTGTaGTTGGCAAAGAACCTGAGA +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLQEKLL*LAKNLR
Trigger: TCTCAGGTTCTTTGCCAATCACAGCAACTTTTCCTG...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp ATAGAGAAATACAAACAGTTACGAGCTAGATCCCACAGGGTTCCAAGGACTTCTCTCAAACATCAGTGGTaGCTCCTGAATCTAACTGCC +
Preference number: 4 (lower is better)
Translates to: IEKYKQLRARSHRVPRTSLKHQW*LLNLTA
Trigger: GGCAGTTAGATTCAGGAGTCACCACTGATGTTTGAG...AGAAGTCCTTGGAACCCTGTGGGATCTAGCTCGTAACTGTTTGTATTTCTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTTCAGGAGAAGCGATGTaGTGGTTGAACACTTCTAGA +
Preference number: 4 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCSGEAM*WLNTSR
Trigger: TCTAGAAGTGTTCAACCATCACATCGCTTCTCCTGA...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp ACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTAGCAGAAGAAAAGACTaGATGCCCATTTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: TMQPCKSAKHASPTISHSSRRKD*MPIWAT
Trigger: TGTAGCCCAAATGGGCATTCAGTCTTTTCTTCTGCT...AGAATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCCCTGCTAGACTTCTCTaGAGGGATCTTGCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLAPARLL*RDLALE
Trigger: TTCTAAAGCAAGATCCCTTCAGAGAAGTCTAGCAGG...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCGGGGACTGGATGAGATaGCTTCAAGTAAAGGTAACA +
Preference number: 4 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPGDWMR*LQVKVT
Trigger: TGTTACCTTTACTTGAAGTCATCTCATCCAGTCCCC...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp ACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTCAGAAGCTTCAGAAATaGACAGTGGAACTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TMQPCKSAKHASPTISHSQKLQK*TVELKS
Trigger: GGACTTCAGTTCCACTGTTCATTTCTGAAGCTTCTG...AGAATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp CCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTTGTCCTATAAACCTAGGCTTCCCAATCTaGCCCATTCCCATTCAACCC +
Preference number: 4 (lower is better)
Translates to: PWVKRCFKLKNSLSCPINLGFPI*PIPIQP
Trigger: GGGTTGAATGGGAATGGGTCAGATTGGGAAGCCTAG...GTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGCCGTTTCTCAATCTCTaGATAGGTCATCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMPFLNL*IGHLFT
Trigger: TGTGAAGAGATGACCTATGCAGAGATTGAGAAACGG...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTCAATTTGCTAACTTaGCCCTGGGTGAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLILNLLT*PWVKRC
Trigger: ACATCTTTTCACCCAGGGGCAAGTTAGCAAATTGAG...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCAGACAGACACCACAATaGCATGCATTACACTGGACA +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLRQTPQ*HALHWT
Trigger: TGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTCT...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTGAGAAAAGACATGACTaGTCTCTAAGAGCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCEKRHD*SLRALQ
Trigger: TTGCAGGGCTCTTAGAGAGCAGTCATGTCTTTTCTC...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAACATTCAACCCAGAGGTaGTCAGCCCCACACCATCCC +
Preference number: 4 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKHSTQR*SAPHHP
Trigger: GGGATGGTGTGGGGCTGAGCACCTCTGGGTTGAATG...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGACTTCTCCAGAGAAATaGATCTCTTGGTTTACACTT +
Preference number: 4 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRTSPEK*ISWFTL
Trigger: AAGTGTAAACCAAGAGATGCATTTCTCTGGAGAAGT...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp ATAGAGAAATACAAACAGTTACGAGCTAGATCCCACAGGGTTCCAAGGACTTCTAATTTCCTTAGAGCTTaGGCAAACTGCTTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: IEKYKQLRARSHRVPRTSNFLRA*ANCFPR
Trigger: GCGGGGAAAGCAGTTTGCCCAAGCTCTAAGGAAATT...AGAAGTCCTTGGAACCCTGTGGGATCTAGCTCGTAACTGTTTGTATTTCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp AAGCAAATGTGGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCAGTTTGAAGATGGTATaGAGAGGGCATCTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: KQMWTMQPCKSAKHASPTSLKMV*RGHLKY
Trigger: ATACTTGAGATGCCCTCTCCATACCATCTTCAAACT...GGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTAAACACTGTAATTTCTTaGACGCCTTATTGTATTCGA +
Preference number: 4 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLNTVIS*TPYCIR
Trigger: TCGAATACAATAAGGCGTCCAAGAAATTACAGTGTT...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTAACTCCTTCTCACTaGTTACCTCTAAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLILTPSH*LPLKDQ
Trigger: CTGGTCTTTTAGAGGTAACCAGTGAGAAGGAGTTAG...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CACGTTTATCACCTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGATGGGACTTGTTTCTTaGCCTTTGGTGGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: HVYHLDERKILVIVVWVKMGLVS*PLVGTP
Trigger: TGGAGTCCCCACCAAAGGCCAAGAAACAAGTCCCAT...CTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAGGTGATAAACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR TCA 90 bp CCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTTGTCCTATAAACAGTCCTGGACTCTGTTaGCTAAAAATCGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PWVKRCFKLKNSLSCPINSPGLC*LKIAGP
Trigger: TGGGCCAGCGATTTTTAGTCAACAGAGTCCAGGACT...GTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTTACAGATACTTCTCTTaGTCTCGAAGTGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLIYRYFS*SRSANS
Trigger: AGAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTA...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAACGAGGACATTGCCCTaGCGTTCCAGCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKTRTLP*RSSSMM
Trigger: CATCATGGAGCTGGAACGTCAGGGCAATGTCCTCGT...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTAGATCCCAGAGATTCTaGGTCAGTATTAAGCATAAG +
Preference number: 4 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLIRSQRF*VSIKHK
Trigger: CTTATGCTTAATACTGACTCAGAATCTCTGGGATCT...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCTCAGAATTCCTAGGCTaGCACTTTTGTCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLASEFLG*HFCLRN
Trigger: GTTTCTCAGACAAAAGTGTCAGCCTAGGAATTCTGA...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCACTACAGTCTGTCAGTaGCAAACAGATCCTACTAGA +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLATTVCQ*QTDPTR
Trigger: TCTAGTAGGATCTGTTTGTCACTGACAGACTGTAGT...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp TCTCAAGGAGCTTTCTTGACTTACTCACGTGATATAAATGGCACTCTACTTTTCTGGAGAGGTGAGGCCTaGACATCCACATCATTAGCA +
Preference number: 4 (lower is better)
Translates to: SQGAFLTYSRDINGTLLFWRGEA*TSTSLA
Trigger: TGCTAATGATGTGGATGTTCAGGCCTCACCTCTCCA...GAAAAGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp TCTCAAGGAGCTTTCTTGACTTACTCACGTGATATAAATGGCACTCTACTTTTCCTTATAGGACTTGACTaGTTCACGCCGATACACCCC +
Preference number: 4 (lower is better)
Translates to: SQGAFLTYSRDINGTLLFLIGLD*FTPIHP
Trigger: GGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAG...GAAAAGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR GCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAACTTATAGGACTTGACTaGTTCACGCCGATACACCCC +
Preference number: 4 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKLIGLD*FTPIHP
Trigger: GGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAG...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp CTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGAGGTCGGTAGGTCCGTTTCTCAATCTCTaGATAGGTCATCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LDERKILVIVVWVKRSVGPFLNL*IGHLFT
Trigger: TGTGAAGAGATGACCTATGCAGAGATTGAGAAACGG...ACCTACCGACCTCTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR GCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCCACCCTATGTCTACTTaGAAGCTCCAGAATATTCTG +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLHPMST*KLQNIL
Trigger: CAGAATATTCTGGAGCTTGCAAGTAGACATAGGGTG...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCTTTGGCAGGAAAAGTTaGTGTGATTGGCAAAGAACC +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLFGRKS*CDWQRT
Trigger: GGTTCTTTGCCAATCACAGCAACTTTTCCTGCCAAA...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp AAGCAAATGTGGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCCTAGACTCAGACTGTTaGTATATTGCAAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: KQMWTMQPCKSAKHASPTLDSDC*YIANVH
Trigger: ATGGACATTTGCAATATAGCAACAGTCTGAGTCTAG...GGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCGTCTGTGGATCAAAGTaGTCCCTCTTCTCATTCATT +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLVCGSK*SLFSFI
Trigger: AATGAATGAGAAGAGGGAGCACTTTGATCCACAGAC...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCAGACCAAATGTGGGTTaGAAAGAGGATTACCCAGAT +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLARPNVG*KEDYPD
Trigger: ATCTGGGTAATCCTCTTTGCAACCCACATTTGGTCT...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCTTGACTAAAAATCGCTaGCCCACGTTTATCACCTTG +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLLTKNR*PTFITL
Trigger: CAAGGTGATAAACGTGGGCCAGCGATTTTTAGTCAA...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGAGGTCGGTAGGTTTGACTAAAAATCGCTaGCCCACGTTTATCACCTTG +
Preference number: 4 (lower is better)
Translates to: LDERKILVIVVWVKRSVGLTKNR*PTFITL
Trigger: CAAGGTGATAAACGTGGGCCAGCGATTTTTAGTCAA...ACCTACCGACCTCTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCATCCTTACAGGGGTTTaGTTCTTGGGGAAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLILTGV*FLGKLL
Trigger: TAACAACTTCCCCAAGAACCAAACCCCTGTAAGGAT...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAGAAGATCCAAGAGTGTaGGGCATGCTCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKEDPRV*GMLSPK
Trigger: CTTGGGGCTGAGCATGCCCCACACTCTTGGATCTTC...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp ACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTAGCAGCCCTGTCCAATaGAATACAACATTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: TMQPCKSAKHASPTISHSSSPVQ*NTTFQN
Trigger: GTTCTGAAATGTTGTATTCCATTGGACAGGGCTGCT...AGAATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp TCTCAAGGAGCTTTCTTGACTTACTCACGTGATATAAATGGCACTCTACTTTTCAGGACTTATAGGACTTaGCTGCTTCACGCCGATACA +
Preference number: 4 (lower is better)
Translates to: SQGAFLTYSRDINGTLLFRTYRT*LLHADT
Trigger: TGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCT...GAAAAGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp CCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTTGTCCTATAAACTCAAACACCGCAATCTaGCCATTCTCCTCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: PWVKRCFKLKNSLSCPINSNTAI*PFSSVR
Trigger: TCTCACTGAGGAGAATGGTCAGATTGCGGTGTTTGA...GTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAAATGGGAGAAAAGACATaGCTGCTCTCTAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKMGEKT*LLSKSP
Trigger: AGGGCTCTTAGAGAGCAGTCATGTCTTTTCTCCCAT...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCACACAGGCATGTTTATaGTTCAACAATCCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLTQACL*FNNPKG
Trigger: GCCTTTAGGATTGTTGAATCATAAACATGCCTGTGT...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp GTAAGAGCTCTTTTCCATTCTACATTCTCCTGGCTTCTTCCTGCTAGACTTCTCGCTGACACTTTTGTCTaGGAAACTACTATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: VRALFHSTFSWLLPARLLADTFV*ETTIQY
Trigger: ATACTGGATAGTAGTTTCTCAGACAAAAGTGTCAGC...GAGAAGTCTAGCAGGAAGAAGCCAGGAGAATGTAGAATGGAAAAGAGCTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAAAATGAACAGTGGAACTaGAGTCCTGCCCTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKNEQWN*SPALKQ
Trigger: CTGCTTTAGGGCAGGACTTCAGTTCCACTGTTCATT...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAGGATACTTTTTCCCGTaGCCATTGGCCACTCCAACC +
Preference number: 4 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKGYFFP*PLATPT
Trigger: GGTTGGAGTGGCCAATGGGCACGGGAAAAAGTATCC...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CACGTTTATCACCTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGAGCGTGTTAGTTTCTTaGACACGTAGGTTTTACCCC +
Preference number: 4 (lower is better)
Translates to: HVYHLDERKILVIVVWVKSVLVS*TRRFYP
Trigger: GGGGTAAAACCTACGTGTCCAAGAAACTAACACGCT...CTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAGGTGATAAACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CCA 90 bp ACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTCAGATAACTTTAAGGTaGGGAGTCACCTATCTCTTT +
Preference number: 4 (lower is better)
Translates to: TMQPCKSAKHASPTISHSQITLR*GVTYLF
Trigger: AAAGAGATAGGTGACTCCCCACCTTAAAGTTATCTG...AGAATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp ACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTTTTAGAAGCTGCCTATaGTATCCTACTTGGGACATA +
Preference number: 4 (lower is better)
Translates to: TMQPCKSAKHASPTISHSFRSCL*YPTWDI
Trigger: TATGTCCCAAGTAGGATACCATAGGCAGCTTCTAAA...AGAATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp ACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTTGCGTAGGTAAACATTaGTCACAGATATCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: TMQPCKSAKHASPTISHSCVGKH*SQISSE
Trigger: TTCACTGGATATCTGTGACCAATGTTTACCTACGCA...AGAATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp TCTCAAGGAGCTTTCTTGACTTACTCACGTGATATAAATGGCACTCTACTTTTCGATGGGTACCCATTTTaGGGAGTCTTGCAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: SQGAFLTYSRDINGTLLFDGYPF*GVLQSD
Trigger: ATCTGACTGCAAGACTCCCCAAAATGGGTACCCATC...GAAAAGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp ACATCAGGATCATCACAGACGGATTCCACAAAGAATACCTTGAAGGAATTCTGTTGGAGGCTATGGAGCTaGATCAACTTCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: TSGSSQTDSTKNTLKEFCWRLWS*INFIDF
Trigger: GAAGTCAATGAAGTTGATCCAGCTCCATAGCCTCCA...ACAGAATTCCTTCAAGGTATTCTTTGTGGAATCCGTCTGTGATGATCCTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
3UTR CAA 72 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTaGCAAAGAGGATTACCCAGATCCTCATATGGAATA +
Preference number: 4 (lower is better)
Translates to: FKMPVSLKTKCG*QRGLPRSSYGI
Trigger: TATTCCATATGAGGATCTGGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAATTAATGACTCCTTGGTaGTTAGTGACAAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKLMTPW*LVTRAG
Trigger: TCCTGCCCTTGTCACTAATCACCAAGGAGTCATTAA...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp CCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTTGTCCTATAAACGGTAGTAGACTATCTTaGTCTGGATGTAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PWVKRCFKLKNSLSCPINGSRLS*SGCSPG
Trigger: TCCAGGACTACATCCAGAGCAAGATAGTCTACTACC...GTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp CCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTTGTCCTATAAACCTCTTCTCTGCCTCTTaGCTTGAGCAACTCAAACAT +
Preference number: 4 (lower is better)
Translates to: PWVKRCFKLKNSLSCPINLFSAS*LEQLKH
Trigger: ATGTTTGAGTTGCTCAAGGCAAGAGGCAGAGAAGAG...GTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp ACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTCTTAAAATCCCCAGCTaGTCTCTAGAGACAATTATT +
Preference number: 4 (lower is better)
Translates to: TMQPCKSAKHASPTISHSLKIPS*SLETII
Trigger: AATAATTGTCTCTAGAGAGCAGCTGGGGATTTTAAG...AGAATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCTACAGATTACCAACATaGATTCAAGTAAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLAYRLPT*IQVRPG
Trigger: TCCTGGTCTTACTTGAATGCATGTTGGTAATCTGTA...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGAAAGACAGTTTTCGATaGAGAGAGAAATCCATATCA +
Preference number: 4 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMKDSFR*REKSIS
Trigger: TGATATGGATTTCTCTCTGCATCGAAAACTGTCTTT...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAAAGCGTGTTAGTTTCTTaGACACGTAGGTTTTACCCC +
Preference number: 4 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKSVLVS*TRRFYP
Trigger: GGGGTAAAACCTACGTGTCCAAGAAACTAACACGCT...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAAGCAGAAAGCATTAACTaGGCCAGACTTGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKAESIN*ARLVSC
Trigger: ACAAGAGACAAGTCTGGCCCAGTTAATGCTTTCTGC...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCAAAATAACCTTCCTCTaGACAAGGACCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPKITFL*TRTFSS
Trigger: AGAAGAAAAGGTCCTTGTCCAGAGGAAGGTTATTTT...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp ATAGAGAAATACAAACAGTTACGAGCTAGATCCCACAGGGTTCCAAGGACTTCTCCATCCAAGCAAATGTaGACAATGCAACCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: IEKYKQLRARSHRVPRTSPSKQM*TMQPCK
Trigger: TTTACAAGGTTGCATTGTCCACATTTGCTTGGATGG...AGAAGTCCTTGGAACCCTGTGGGATCTAGCTCGTAACTGTTTGTATTTCTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp ATAGAGAAATACAAACAGTTACGAGCTAGATCCCACAGGGTTCCAAGGACTTCTAATTCTTCTGATTACTaGATACTTTTTCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: IEKYKQLRARSHRVPRTSNSSDY*ILFPVP
Trigger: GGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATT...AGAAGTCCTTGGAACCCTGTGGGATCTAGCTCGTAACTGTTTGTATTTCTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCGTACATACACTTCAATaGATACAATCAGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: NPDTILLITGYFFPCPLAVHTLQ*IQSESR
Trigger: CCTGCTTTCTGATTGTATCCATTGAAGTGTATGTAC...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCAGATCCCTAGCACAATaGAAGTTTTTAGAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPRSLAQ*KFLEAF
Trigger: AAAAGCTTCTAAAAACTTGCATTGTGCTAGGGATCT...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAAAAGTGCAAACTCTTCTaGGTACCGTTTCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKKCKLF*VPFLNL
Trigger: GAGATTGAGAAACGGTACCCAGAAGAGTTTGCACTT...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAACACAACATGGCTTCTaGGCTTGGCAAAGACAATGG +
Preference number: 4 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKTQHGF*AWQRQW
Trigger: CCATTGTCTTTGCCAAGCCCAGAAGCCATGTTGTGT...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp TCTCAAGGAGCTTTCTTGACTTACTCACGTGATATAAATGGCACTCTACTTTTCTACAGATACTTCTCTTaGTCTCGAAGTGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: SQGAFLTYSRDINGTLLFYRYFS*SRSANS
Trigger: AGAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTA...GAAAAGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR TCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAAAGCGATGTGATGGTTaGACACTTCTAGACTCAGAC +
Preference number: 4 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKKRCDG*TLLDSD
Trigger: GTCTGAGTCTAGAAGTGTTCAACCATCACATCGCTT...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR TCA 90 bp TCTCAAGGAGCTTTCTTGACTTACTCACGTGATATAAATGGCACTCTACTTTTCCTTGACTTACTCACGTaGTATAAATGGCACTCTACT +
Preference number: 4 (lower is better)
Translates to: SQGAFLTYSRDINGTLLFLDLLT*YKWHST
Trigger: AGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAG...GAAAAGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CCA 90 bp CCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTTGTCCTATAAACTTGCTAACTTGCCCCTaGGTGAAAAGATGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: PWVKRCFKLKNSLSCPINLLTCP*VKRCFK
Trigger: TTTGAAACATCTTTTCACCCAGGGGCAAGTTAGCAA...GTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CAA 72 bp GACTATGAGGAATTCAGAATTCCTAGGCTGACACTTTaGTCTGAGAAACTACTATCCAGTATTTTTCCACCT +
Preference number: 4 (lower is better)
Translates to: DYEEFRIPRLTL*SEKLLSSIFPP
Trigger: AGGTGGAAAAATACTGGATAGTAGTTTCTCAGACAAAAGTGTCAGCCTAGGAATTCTGAATTCCTCATAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAGAAGAAAAGACTGAATaGCCATTTGGGCTACAGATG +
Preference number: 4 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKEEKTE*PFGLQM
Trigger: CATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTTC...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAAGCTTGGCAAAGACAATaGAATGTGCATAAGATTACA +
Preference number: 4 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKAWQRQ*NVHKIT
Trigger: TGTAATCTTATGCACATTCCATTGTCTTTGCCAAGC...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR GCA 90 bp CCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTTGTCCTATAAACCAGATACAAAAACATTaGGTAGGTAAACATTGGTCA +
Preference number: 4 (lower is better)
Translates to: PWVKRCFKLKNSLSCPINQIQKH*VGKHWS
Trigger: TGACCAATGTTTACCTACGCAATGTTTTTGTATCTG...GTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAATCTAAGGAATACTCCTaGATGAGAACCACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKSKEYS*MRTTAK
Trigger: TTTTGCTGTGGTTCTCATCCAGGAGTATTCCTTAGA...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CCA 90 bp CAGAATGTTGCTAAAGACTTATGTTCCTATTTCAACAGAGCAGTGCCTAGGAAATTAAATGGATCTGAGTaGCATACTTTGTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: QNVAKDLCSYFNRAVPRKLNGSE*HTLLSV
Trigger: CACTGATAACAAAGTATGCCACTCAGATCCATTTAA...TTTCCTAGGCACTGCTCTGTTGAAATAGGAACATAAGTCTTTAGCAACATTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
3UTR CAA 72 bp GGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTaGTCCTATAAACACATAACCTCATGTTCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: GEKMFQTEEQLK*SYKHITSCSVL
Trigger: TAACACAGAACATGAGGTTATGTGTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS GCA 90 bp CCTACGATCTCTCCTAAGATCCCTCCCTGCCTTGGCCCCGGCGCCTaGCCTGTAACGCGACCGAACCGAGCCGACAGCTTGTGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: PTISPKIPPCLGPGA*PVTRPNRADSLWPG
Trigger: TCCCGGCCACAAGCTGTCGGCTCGGTTCGGTCGCGTTACAGGGCAGGCGCCGGGGCCAAGGCAGGGAGGGATCTTAGGAGAGATCGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367080.8
ENST00000464777.5
CDS GCA 90 bp TGGCAGCTCTTCAGATGTCCTACGATCTCTCCTAAGATCCCTCCCTaGCTTGGCCCCGGCGCCTGCCCTGTAACGCGACCGAACCGAGCC +
Preference number: 5 (lower is better)
Translates to: WQLFRCPTISPKIPP*LGPGACPVTRPNRA
Trigger: GGCTCGGTTCGGTCGCGTTACAGGGCAGGCGCCGGGGCCAAGGCAGGGAGGGATCTTAGGAGAGATCGTAGGACATCTGAAGAGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367080.8
ENST00000464777.5
ENST00000468857.1
CDS-3UTR CAA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTCTTGTTTCTTGGCCTTaGGTGGGGACTCCAATCCAG +
Preference number: 5 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSLVSWP*VGTPIQ
Trigger: CTGGATTGGAGTCCCCACCAAAGGCCAAGAAACAAG...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS TCA 90 bp GAGGCCAGGGCTGGAGGGAAACACACAGTTACACCACCGGAATGCTaGCTTGGGTCTTCGGCTAGTCGGCCCCTTCTTGCATGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: EARAGGKHTVTPPEC*LGSSASRPLLACPG
Trigger: CCCAGGACATGCAAGAAGGGGCCGACTAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCCCTCCAGCCCTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp GGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGATCTTCCCCAAGAGATaGAACTCGCTTTCTCCATGC +
Preference number: 5 (lower is better)
Translates to: GRCGGASAHSQCGLCCSWIFPKR*NSLSPC
Trigger: GCATGGAGAAAGCGAGTTCAATCTCTTGGGGAAGAT...CCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp GAGGGACGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTGCTGGATCAACTTCATaGACTTCATCCATGGGTGTG +
Preference number: 5 (lower is better)
Translates to: EGRCGGASAHSQCGLCCSAGSTS*TSSMGV
Trigger: CACACCCATGGATGAAGTCAATGAAGTTGATCCAGC...ACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTTGGTCTCTGCTGCAGTaGGCTTGTCACGGTGCGTGT +
Preference number: 5 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLWSLLQ*ACHGAC
Trigger: ACACGCACCGTGACAAGCCAACTGCAGCAGAGACCA...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp CGCTGCGGAGGGGCGTCTGCGCACAGCCAGTGTGGTCTCTGCTGCAGTTGGCTTTCCACAAAGAATACCTaGAAGGAATTCTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: RCGGASAHSQCGLCCSWLSTKNT*KEFCSA
Trigger: TGCTGAACAGAATTCCTTCAAGGTATTCTTTGTGGA...AAGCCAACTGCAGCAGAGACCACACTGGCTGTGCGCAGACGCCCCTCCGCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGCCATTTTGGGGAGTCTaGCAGTCAGATCCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKPFWGV*QSDPVL
Trigger: CAGGACAGGATCTGACTGCAAGACTCCCCAAAATGG...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCACATCAGCCCCATCTaGATGCATGAGAGGCACATG +
Preference number: 5 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLHISPI*MHERHM
Trigger: CATGTGCCTCTCATGCATCAAGATGGGGCTGATGTG...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp TCCTCCAGAAATTTCCTTAGAGCTTGGGCAAACTGCTTTCCCCGCACCGAGAGGGTCGAAGGAGGAGTCTaGAATCCAGCTTGTGCCCCT +
Preference number: 5 (lower is better)
Translates to: SSRNFLRAWANCFPRTERVEGGV*NPACAP
Trigger: AGGGGCACAAGCTGGATTCAAGACTCCTCCTTCGAC...CCTCTCGGTGCGGGGAAAGCAGTTTGCCCAAGCTCTAAGGAAATTTCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS CCA 90 bp AGGGCTGAGGGGCTTGAGGGGCCGGCTCCCAACACTGTAATTTCTTaGACGCCTTATTGTATTCGAACTGGACAGAGGCGTAAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: RAEGLEGPAPNTVIS*TPYCIRTGQRRKAV
Trigger: AACAGCTTTACGCCTCTGTCCAGTTCGAATACAATAAGGCGTCCAAGAAATTACAGTGTTGGGAGCCGGCCCCTCAAGCCCCTCAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp TTCCCATTAGGCAGGAGGGGAGGAAATATGGTGACGTTTCTCCAGGCCTCGTTTTCTGCTGCAGTTGGCTaGTCACGGTGCGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: FPLGRRGGNMVTFLQASFSAAVG*SRCVFT
Trigger: TGTGAACACGCACCGTGACAAGCCAACTGCAGCAGA...AAACGAGGCCTGGAGAAACGTCACCATATTTCCTCCCCTCCTGCCTAATGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGAGATGGGTACCCATTTaGGGGAGTCTTGCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKRWVPI*GSLAVR
Trigger: TCTGACTGCAAGACTCCCCAAAATGGGTACCCATCT...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCCTCTCCCGGGTTGTATaGGTGGCATCAAACACCGCA +
Preference number: 5 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCLSRVV*VASNTA
Trigger: TGCGGTGTTTGATGCCACCAATACAACCCGGGAGAG...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCCTAGTCGGCCCCTTCTaGCATGTCCTGGGCACGGAG +
Preference number: 5 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPLVGPF*HVLGTE
Trigger: CTCCGTGCCCAGGACATGCAAGAAGGGGCCGACTAG...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp ATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGTGGTCTCTGCTGCAGTaGGCTTGTCACGGTGCGTGT +
Preference number: 5 (lower is better)
Translates to: IVMPKEVVGLIGLDCFTPWSLLQ*ACHGAC
Trigger: ACACGCACCGTGACAAGCCAACTGCAGCAGAGACCA...CGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp TCCTCAGTGAGATACGCCTTAACATCTTCCAGCGCCACCAGAGCACACTGTTTGCCCACCAAATGGGACTaGTTTCTTGGCCTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: SSVRYALTSSSATRAHCLPTKWD*FLGLWW
Trigger: CCACCAAAGGCCAAGAAACAAGTCCCATTTGGTGGG...CAAACAGTGTGCTCTGGTGGCGCTGGAAGATGTTAAGGCGTATCTCACTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp GTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGATTAAACACCGCCACCAGAGCACATaGCGGATCTTCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VGLIGLDCFTPIHPKIKHRHQST*RIFMAS
Trigger: GGAGGCCATGAAGATCCGCAATGTGCTCTGGTGGCG...GTGTTTAATCTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS GCA 90 bp GGCAGCTCTTCAGATGTCAGAACCGTGGTCCCAGCAGACAACTCTTaGCTCTTTACTAGTGTGTACTATGTCGTCGAAGGAGGAGTCTTG +
Preference number: 5 (lower is better)
Translates to: GSSSDVRTVVPADNS*LFTSVYYVVEGGVL
Trigger: CAAGACTCCTCCTTCGACGACATAGTACACACTAGTAAAGAGGCAAGAGTTGTCTGCTGGGACCACGGTTCTGACATCTGAAGAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411990.6
ENST00000618513.4
CDS-3UTR CAA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTATTCATGGCCTCCTCATaGTCATGCCGAAAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLFMASS*SCRKKS
Trigger: CGACTTCTTTCGGCATGACAATGAGGAGGCCATGAA...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp GGTAGCGTGTTAGTTTCTTGGACACGTAGGTTTTACCCCGGGCTGGCAAACCAATTCATGGCCTCCTCATaGTCATGCCGAAAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: GSVLVSWTRRFYPGLANQFMASS*SCRKKS
Trigger: CGACTTCTTTCGGCATGACAATGAGGAGGCCATGAA...TTGGTTTGCCAGCCCGGGGTAAAACCTACGTGTCCAAGAAACTAACACGCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS-3UTR CAA 90 bp AAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGACCAGAGCACACTGTTaGCGGATCTTCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: KEVVGLIGLDCFTPIHPKTRAHC*RIFMAS
Trigger: GGAGGCCATGAAGATCCGCAAACAGTGTGCTCTGGT...CTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp AAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGCTCTCCCGGGTTGTATaGGTGGCATCAAACACCGCA +
Preference number: 5 (lower is better)
Translates to: KEVVGLIGLDCFTPIHPKLSRVV*VASNTA
Trigger: TGCGGTGTTTGATGCCACCAATACAACCCGGGAGAG...CTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp TTCCCATTAGGCAGGAGGGGAGGAAATATGGTGACGTTTCTCCAGGCCTCGTTTGCCACAGGAGTAAGTTaGAAGATGGTATGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: FPLGRRGGNMVTFLQASFATGVS*KMVWRG
Trigger: CCCTCTCCATACCATCTTCAAACTTACTCCTGTGGC...AAACGAGGCCTGGAGAAACGTCACCATATTTCCTCCCCTCCTGCCTAATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCCACCGGAATGCTGACTaGGGTCTTCGGCTAGTCGGC +
Preference number: 5 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPHRNAD*GLRLVG
Trigger: GCCGACTAGCCGAAGACCCAAGTCAGCATTCCGGTG...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp AAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGTCTGCTGCAGTTGGCTaGTCACGGTGCGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: KEVVGLIGLDCFTPIHPKSAAVG*SRCVFT
Trigger: TGTGAACACGCACCGTGACAAGCCAACTGCAGCAGA...CTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp GTGACGTTTCTCCAGGCCTCGTTTTGGTGGCCCCCAAAGTCCAGTTCCCACTTAAGTCACTGGTTCAGGTaGCTAAATGTTTTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: VTFLQASFWWPPKSSSHLSHWFR*LNVLRH
Trigger: GTGCCTCAAAACATTTAGCAACCTGAACCAGTGACT...TAAGTGGGAACTGGACTTTGGGGGCCACCAAAACGAGGCCTGGAGAAACGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGCATTCACCTGGTGATTaGTCTCTTGCTTCCAATGTG +
Preference number: 5 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKHSPGD*SLASNV
Trigger: CACATTGGAAGCAAGAGACAAATCACCAGGTGAATG...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS TCA 90 bp GTACTATGTCGTCGAAGGAGGAGTCTTGAATCCAGCTTGTGCCCCTaGGATGAGACGCCTCATAGCACAAATTGTAGCAAGCGATCCAGA +
Preference number: 5 (lower is better)
Translates to: VLCRRRRSLESSLCP*DETPHSTNCSKRSR
Trigger: TCTGGATCGCTTGCTACAATTTGTGCTATGAGGCGTCTCATCTCAGGGGCACAAGCTGGATTCAAGACTCCTCCTTCGACGACATAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411990.6
ENST00000615360.4
ENST00000618513.4
CDS GCA 90 bp ACTTTGCCTGTGCTTACCAGAACCGTGGTCCCAGCAGACAACTCTTaGCTCTTTACTAGTGTGTACTATGTCGTCGAAGGAGGAGTCTTG +
Preference number: 5 (lower is better)
Translates to: TLPVLTRTVVPADNS*LFTSVYYVVEGGVL
Trigger: CAAGACTCCTCCTTCGACGACATAGTACACACTAGTAAAGAGGCAAGAGTTGTCTGCTGGGACCACGGTTCTGGTAAGCACAGGCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615360.4
CDS-3UTR CAA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCTTCATGGCCTCCTCATaGTCATGCCGAAAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCFMASS*SCRKKS
Trigger: CGACTTCTTTCGGCATGACAATGAGGAGGCCATGAA...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGACCAGAGCACACTGTTaGCGGATCTTCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMTRAHC*RIFMAS
Trigger: GGAGGCCATGAAGATCCGCAAACAGTGTGCTCTGGT...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp TATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTCCACCTGTTCTGAAGTTAACCTCCAGAATATaGGCAGCAATGACATCAGGA +
Preference number: 5 (lower is better)
Translates to: YHGDRAHRGACLLPPVLKLTSRI*AAMTSG
Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTTAA...CTTCAGAACAGGTGGAAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp TTCCCATTAGGCAGGAGGGGAGGAAATATGGTGACGTTTCTCCAGGCCTCGTTTATCTTCCCCAAGAGATaGAACTCGCTTTCTCCATGC +
Preference number: 5 (lower is better)
Translates to: FPLGRRGGNMVTFLQASFIFPKR*NSLSPC
Trigger: GCATGGAGAAAGCGAGTTCAATCTCTTGGGGAAGAT...AAACGAGGCCTGGAGAAACGTCACCATATTTCCTCCCCTCCTGCCTAATGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTAAAGTTGTTAGTTGGCTaGTCACGGTGCGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLKLLVG*SRCVFT
Trigger: TGTGAACACGCACCGTGACAAGCCAACTAACAACTT...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAATTTTTCCCGTGCCCATaGGCCACTCCAACCACCAAT +
Preference number: 5 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKFFPCP*ATPTTN
Trigger: ATTGGTGGTTGGAGTGGCCAATGGGCACGGGAAAAA...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp GGACACGTAGGTTTTACCCCGGGCTGGCAAACCAATCATAACGATCAGAGTCGGCTGACATTCGAAGATTaGGGGTTTTGGTTTCATAGC +
Preference number: 5 (lower is better)
Translates to: GHVGFTPGWQTNHNDQSRLTFED*GFWFHS
Trigger: GCTATGAAACCAAAACCCCAAATCTTCGAATGTCAG...CCGACTCTGATCGTTATGATTGGTTTGCCAGCCCGGGGTAAAACCTACGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS-3UTR CAA 90 bp ACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTCTACCAGAGCACACTGTTaGCGGATCTTCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: TMQPCKSAKHASPTISHSTRAHC*RIFMAS
Trigger: GGAGGCCATGAAGATCCGCAAACAGTGTGCTCTGGT...AGAATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCCTCTCCCGGGTTGTATaGGTGGCATCAAACACCGCA +
Preference number: 5 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPLSRVV*VASNTA
Trigger: TGCGGTGTTTGATGCCACCAATACAACCCGGGAGAG...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp TTCCCATTAGGCAGGAGGGGAGGAAATATGGTGACGTTTCTCCAGGCCTCGTTTTGGCTTGTCCACACTTaGAGGTCTGTTATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: FPLGRRGGNMVTFLQASFWLVHT*RSVISC
Trigger: ACAGGAAATAACAGACCTCAAAGTGTGGACAAGCCA...AAACGAGGCCTGGAGAAACGTCACCATATTTCCTCCCCTCCTGCCTAATGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp ATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGGCCACAGGAGTAAGTTaGAAGATGGTATGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: IVMPKEVVGLIGLDCFTPATGVS*KMVWRG
Trigger: CCCTCTCCATACCATCTTCAAACTTACTCCTGTGGC...CGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAATGGTTCTTGGGGAAGTaGTTAGTTGGCTTGTCACGG +
Preference number: 5 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKWFLGK*LVGLSR
Trigger: CCGTGACAAGCCAACTAACAACTTCCCCAAGAACCA...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp CTCTCTCAAGGACTGTATCATGGTGACAGAGCCCACAGAGGGGCGTGTCTCCTTGATACATTCATACATTaGACAATCACTGGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LSQGLYHGDRAHRGACLLDTFIH*TITGEE
Trigger: CTCTTCCCCAGTGATTGTCAAATGTATGAATGTATC...AAGGAGACACGCCCCTCTGTGGGCTCTGTCACCATGATACAGTCCTTGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCTTCCTGAAGGCAGCTTaGTACGTAGAAAAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCFLKAA*YVEKQL
Trigger: GAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAA...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp CTTCAGGGAAAGTCGATTCTACCCCACCAGTGCTGCAACCCGACTCAGTTGTTACTGACATTCGAAGATTaGGGGTTTTGGTTTCATAGC +
Preference number: 5 (lower is better)
Translates to: LQGKSILPHQCCNPTQLLLTFED*GFWFHS
Trigger: GCTATGAAACCAAAACCCCAAATCTTCGAATGTCAG...TAACAACTGAGTCGGGTTGCAGCACTGGTGGGGTAGAATCGACTTTCCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAACATCCTTACAGGGGTTaGGTTCTTGGGGAAGTTGTT +
Preference number: 5 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKHPYRG*VLGEVV
Trigger: AACAACTTCCCCAAGAACCAAACCCCTGTAAGGATG...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCCTGGTGATTTGTCTCTaGCTTCCAATGTGGCAAATG +
Preference number: 5 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCLVICL*LPMWQM
Trigger: CATTTGCCACATTGGAAGCAAGAGACAAATCACCAG...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp GTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGATTAAACACAGCTACTCAGGAGGATaGCTTGAGCTCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: VGLIGLDCFTPIHPKIKHSYSGG*LELRSS
Trigger: TGAACTCCTGAGCTCAAGCAATCCTCCTGAGTAGCT...GTGTTTAATCTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS TCA 90 bp CACTTTGCACCCTCCCCACCAGGATATCGATACAGATACTTCTCTTaGTCTCGAAGTGCAAACTCTTCTGGGTACCGTTTCTCAATCTCT +
Preference number: 5 (lower is better)
Translates to: HFAPSPPGYRYRYFS*SRSANSSGYRFSIS
Trigger: AGAGATTGAGAAACGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTATCGATATCCTGGTGGGGAGGGTGCAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473310.5
CDS-3UTR CAA 90 bp TATGAGAGATCAGTGACCACAATAGTGACCAGTGGCCAAGAGGCAGGTATCAGGCTGACATTCGAAGATTaGGGGTTTTGGTTTCATAGC +
Preference number: 5 (lower is better)
Translates to: YERSVTTIVTSGQEAGIRLTFED*GFWFHS
Trigger: GCTATGAAACCAAAACCCCAAATCTTCGAATGTCAG...CCTGATACCTGCCTCTTGGCCACTGGTCACTATTGTGGTCACTGATCTCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp TGCACCAGGTCCTGGTATGACTCCCCACCAGGATATCGATACAGATACTTCTCTCTGACATTCGAAGATTaGGGGTTTTGGTTTCATAGC +
Preference number: 5 (lower is better)
Translates to: CTRSWYDSPPGYRYRYFSLTFED*GFWFHS
Trigger: GCTATGAAACCAAAACCCCAAATCTTCGAATGTCAG...AGAGAAGTATCTGTATCGATATCCTGGTGGGGAGTCATACCAGGACCTGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGCCAAGATTAAACACTTaGGTGGGGACTCCAATCCAG +
Preference number: 5 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMPRLNT*VGTPIQ
Trigger: CTGGATTGGAGTCCCCACCAAAGTGTTTAATCTTGG...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp CTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGAGGTCGGTAGGTTTCATGGCCTCCTCATaGTCATGCCGAAAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: LDERKILVIVVWVKRSVGFMASS*SCRKKS
Trigger: CGACTTCTTTCGGCATGACAATGAGGAGGCCATGAA...ACCTACCGACCTCTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAATGGCTTGTCCACACTTaGAGGTCTGTTATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKWLVHT*RSVISC
Trigger: ACAGGAAATAACAGACCTCAAAGTGTGGACAAGCCA...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp TTCCCATTAGGCAGGAGGGGAGGAAATATGGTGACGTTTCTCCAGGCCTCGTTTATACAGATACTTCTCTaGATCTCGAAGTGCAAACTC +
Preference number: 5 (lower is better)
Translates to: FPLGRRGGNMVTFLQASFIQILL*ISKCKL
Trigger: GAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTAT...AAACGAGGCCTGGAGAAACGTCACCATATTTCCTCCCCTCCTGCCTAATGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCGCCACAGGAGTAAGTTaGAAGATGGTATGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPATGVS*KMVWRG
Trigger: CCCTCTCCATACCATCTTCAAACTTACTCCTGTGGC...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp TTCAAAATGCCAGTGTCTCTGAAGACCAAATGTGGGTTGCAAAGAGGATTACCCTTAACTGGGCCAGACTaGTCTCTTGTCAATCACCCC +
Preference number: 5 (lower is better)
Translates to: FKMPVSLKTKCGLQRGLPLTGPD*SLVNHP
Trigger: GGGGTGATTGACAAGAGACAAGTCTGGCCCAGTTAA...GGGTAATCCTCTTTGCAACCCACATTTGGTCTTCAGAGACACTGGCATTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp AAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGTAGACTGAATGCCCATTaGGGCTACAGATGCCACCAT +
Preference number: 5 (lower is better)
Translates to: KKRLNAHLGYRCHHPSKCRLNAH*GYRCHH
Trigger: ATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCT...ACATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS TCA 90 bp CAAGCGATCCAGACTTCTATAGTGAGGCAATACTGTAAAATGTGGTaGAAAACAGGTTTGATGGCCGTCTTGGAGGCTATGGAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: QAIQTSIVRQYCKMW*KTGLMAVLEAMELD
Trigger: ATCCAGCTCCATAGCCTCCAAGACGGCCATCAAACCTGTTTTTCACCACATTTTACAGTATTGCCTCACTATAGAAGTCTGGATCGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS TCA 90 bp ATGGCAGCTCTTCAGATGTCTGTAAAATGTGGTGAAAAACAGGTTTaGTGGCCGTCTTGGAGGCTATGGAGCTGGATCAACTTCATTGAC +
Preference number: 5 (lower is better)
Translates to: MAALQMSVKCGEKQV*WPSWRLWSWINFID
Trigger: GTCAATGAAGTTGATCCAGCTCCATAGCCTCCAAGACGGCCATCAAACCTGTTTTTCACCACATTTTACAGACATCTGAAGAGCTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545806.5
CDS GCA 90 bp CTCATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTaGTTCACGCCGATACACCCCAAGATTAAACACTGTAGAAGACAC +
Preference number: 5 (lower is better)
Translates to: LIVMPKEVVGLIGLD*FTPIHPKIKHCRRH
Trigger: GTGTCTTCTACAGTGTTTAATCTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp AAGCAAATGTGGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCTTAACCTCCAGAATATaGGCAGCAATGACATCAGGA +
Preference number: 5 (lower is better)
Translates to: KQMWTMQPCKSAKHASPTLTSRI*AAMTSG
Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTTAA...GGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp ATTGTCATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGTTAACCTCCAGAATATaGGCAGCAATGACATCAGGA +
Preference number: 5 (lower is better)
Translates to: IVMPKEVVGLIGLDCFTPLTSRI*AAMTSG
Trigger: TCCTGATGTCATTGCTGCCAATATTCTGGAGGTTAA...CGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCATGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp ATAGAGAAATACAAACAGTTACGAGCTAGATCCCACAGGGTTCCAAGGACTTCTACAGGGGTTTGGTTCTaGGGGAAGTTGTTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: IEKYKQLRARSHRVPRTSTGVWF*GKLLVG
Trigger: GCCAACTAACAACTTCCCCAAGAACCAAACCCCTGT...AGAAGTCCTTGGAACCCTGTGGGATCTAGCTCGTAACTGTTTGTATTTCTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp GAAGAAAAGACTGAATGCCCATTTGGGCTACAGATGCCACCATCCAAGCAAATGCCTATGGTATCCTACTaGGGACATACGAGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: EEKTECPFGLQMPPSKQMPMVSY*GHTSKG
Trigger: TCCTTTACTCGTATGTCCCAAGTAGGATACCATAGG...CATTTGCTTGGATGGTGGCATCTGTAGCCCAAATGGGCATTCAGTCTTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGATGAGATTGACCAACTaGGACCAAACTCAGCACAGA +
Preference number: 5 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMMRLTN*DQTQHR
Trigger: TCTGTGCTGAGTTTGGTCCAAGTTGGTCAATCTCAT...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp ACATCAGGATCATCACAGACGGATTCCACAAAGAATACCTTGAAGGAATTCTGTAATGGGACTTGTTTCTaGGCCTTTGGTGGGGACTCC +
Preference number: 5 (lower is better)
Translates to: TSGSSQTDSTKNTLKEFCNGTCF*AFGGDS
Trigger: GGAGTCCCCACCAAAGGCCAAGAAACAAGTCCCATT...ACAGAATTCCTTCAAGGTATTCTTTGTGGAATCCGTCTGTGATGATCCTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp AAGCAAATGTGGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATACAGATACTTCTCTaGATCTCGAAGTGCAAACTC +
Preference number: 5 (lower is better)
Translates to: KQMWTMQPCKSAKHASPTIQILL*ISKCKL
Trigger: GAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTAT...GGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCCACATTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp AAAGAAGTCGTAGGACTTATAGGACTTGACTGCTTCACGCCGATACACCCCAAGATACAGATACTTCTCTaGATCTCGAAGTGCAAACTC +
Preference number: 5 (lower is better)
Translates to: KEVVGLIGLDCFTPIHPKIQILL*ISKCKL
Trigger: GAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTAT...CTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTTTCTTGGACGCCTTATaGTATTCGAACTGGACAGAG +
Preference number: 5 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCFLDAL*YSNWTE
Trigger: CTCTGTCCAGTTCGAATACAATAAGGCGTCCAAGAA...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCACTCAATTTGCTAACTaGCCCCTGGGTGAAAAGATG +
Preference number: 5 (lower is better)
Translates to: NPDTILLITGYFFPCPLATQFAN*PLGEKM
Trigger: CATCTTTTCACCCAGGGGCAAGTTAGCAAATTGAGT...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp GACAGACACCACAATGCCATGCATTACACTGGACAATCCAGAGGGGACATGAAAATGAGAACCCTAAACTaGCCTCTCAGAAAAACATAC +
Preference number: 5 (lower is better)
Translates to: DRHHNAMHYTGQSRGDMKMRTLN*PLRKTY
Trigger: GTATGTTTTTCTGAGAGGCAAGTTTAGGGTTCTCAT...TTTCATGTCCCCTCTGGATTGTCCAGTGTAATGCATGGCATTGTGGTGTCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp GTAAGGAGCCTTCCTGAAGGCAGCTTTGTACGTAGAAAAGCAGCTCCTAGTTGCGAAGAGTTATCTGATTaGTCTGTAAGGAAAAGCGAA +
Preference number: 5 (lower is better)
Translates to: VRSLPEGSFVRRKAAPSCEELSD*SVRKSE
Trigger: TTCGCTTTTCCTTACAGACAAATCAGATAACTCTTC...GCAACTAGGAGCTGCTTTTCTACGTACAAAGCTGCCTTCAGGAAGGCTCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS TCA 90 bp ATGACCTATATCAACCAGGAAGTCTTATTCTTTCAGGCTTTTGACTaGCTTTGGAAATCCTCCCTTTTCTGTAGTCCAGGCCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: MTYINQEVLFFQAFD*LWKSSLFCSPGLLS
Trigger: GGAAAGGAGGCCTGGACTACAGAAAAGGGAGGATTTCCAAAGTCAGTCAAAAGCCTGAAAGAATAAGACTTCCTGGTTGATATAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615360.4
ENST00000618513.4
CDS-3UTR CAA 90 bp ATAGAGAAATACAAACAGTTACGAGCTAGATCCCACAGGGTTCCAAGGACTTCTGAAGTTAATGACTCCTaGGTGATTAGTGACAAGGGC +
Preference number: 5 (lower is better)
Translates to: IEKYKQLRARSHRVPRTSEVNDS*VISDKG
Trigger: GCCCTTGTCACTAATCACCAAGGAGTCATTAACTTC...AGAAGTCCTTGGAACCCTGTGGGATCTAGCTCGTAACTGTTTGTATTTCTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCTCACCCTATGTCTACTaGCAAGCTCCAGAATATTCT +
Preference number: 5 (lower is better)
Translates to: NPDTILLITGYFFPCPLASPYVY*QAPEYS
Trigger: AGAATATTCTGGAGCTTGCAAGTAGACATAGGGTGA...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp AGAAGACCCTCCATTCACCTGGTGATTTGTCTCTTGCTTCCAATGTGGCAAATGTCTCAAGGAGCTTTCTaGACTTACTCACGTGATATA +
Preference number: 5 (lower is better)
Translates to: RRPSIHLVICLLLPMWQMSQGAF*TYSRDI
Trigger: TATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA...CATTTGCCACATTGGAAGCAAGAGACAAATCACCAGGTGAATGGAGGGTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp AACCCAGATACAATTCTTCTGATTACTGGATACTTTTTCCCGTGCCCATTGGCCTCCACAAAGAATACCTaGAAGGAATTCTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: NPDTILLITGYFFPCPLASTKNT*KEFCSA
Trigger: TGCTGAACAGAATTCCTTCAAGGTATTCTTTGTGGA...GGCCAATGGGCACGGGAAAAAGTATCCAGTAATCAGAAGAATTGTATCTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp CACGTTTATCACCTTGATGAAAGAAAGATCCTTGTCATAGTTGTCTGGGTCAAGTGGCTTGTCCACACTTaGAGGTCTGTTATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: HVYHLDERKILVIVVWVKWLVHT*RSVISC
Trigger: ACAGGAAATAACAGACCTCAAAGTGTGGACAAGCCA...CTTGACCCAGACAACTATGACAAGGATCTTTCTTTCATCAAGGTGATAAACGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS-3UTR CAA 90 bp GGACAATGCAACCTTGTAAAAGTGCCAAACACGCCTCCCCAACCATATCTCATTGAAGAACAGCTTAAGTaGTCCTATAAACACATAACC +
Preference number: 5 (lower is better)
Translates to: GQCNLVKVPNTPPQPYLIEEQLK*SYKHIT
Trigger: GGTTATGTGTTTATAGGACAACTTAAGCTGTTCTTC...AATGAGATATGGTTGGGGAGGCGTGTTTGGCACTTTTACAAGGTTGCATTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTTCTAGACTCAGACTGTaGCTATATTGCAAATGTCCA +
Preference number: 5 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCSRLRL*LYCKCP
Trigger: TGGACATTTGCAATATAGCAACAGTCTGAGTCTAGA...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp ACAGATCCTCCTGGTCTACCAGTTGGTCAACATATAGACACTACTAGAGTCTGTTGCAACCCGACTCAGTaGTTACATATTTTCAATAAG +
Preference number: 5 (lower is better)
Translates to: TDPPGLPVGQHIDTTRVCCNPTQ*LHIFNK
Trigger: CTTATTGAAAATATGTAACAACTGAGTCGGGTTGCA...ACAGACTCTAGTAGTGTCTATATGTTGACCAACTGGTAGACCAGGAGGATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp ATAGAGAAATACAAACAGTTACGAGCTAGATCCCACAGGGTTCCAAGGACTTCTCCATACCAGCATAAGTaGATCTTCTTGTTAGGTCAA +
Preference number: 5 (lower is better)
Translates to: IEKYKQLRARSHRVPRTSPYQHK*IFLLGQ
Trigger: TTGACCTAACAAGAAGATCAACTTATGCTGGTATGG...AGAAGTCCTTGGAACCCTGTGGGATCTAGCTCGTAACTGTTTGTATTTCTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp CCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTTGTCCTATAAACTCTGAGTGGCATACTTaGTTATCAGTGTCACCCGAT +
Preference number: 5 (lower is better)
Translates to: PWVKRCFKLKNSLSCPINSEWHT*LSVSPD
Trigger: ATCGGGTGACACTGATAACAAAGTATGCCACTCAGA...GTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAATCTTCCCCAAGAGATaGAACTCGCTTTCTCCATGC +
Preference number: 5 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKIFPKR*NSLSPC
Trigger: GCATGGAGAAAGCGAGTTCAATCTCTTGGGGAAGAT...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp TCTCAAGGAGCTTTCTTGACTTACTCACGTGATATAAATGGCACTCTACTTTTCTCCACAAAGAATACCTaGAAGGAATTCTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: SQGAFLTYSRDINGTLLFSTKNT*KEFCSA
Trigger: TGCTGAACAGAATTCCTTCAAGGTATTCTTTGTGGA...GAAAAGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS-3UTR CAA 90 bp CCCTGGGTGAAAAGATGTTTCAAACTGAAGAACAGCTTAAGTTGTCCTATAAACCAACACTGTAATTTCTaGGACGCCTTATTGTATTCG +
Preference number: 5 (lower is better)
Translates to: PWVKRCFKLKNSLSCPINQHCNF*DALLYS
Trigger: CGAATACAATAAGGCGTCCAAGAAATTACAGTGTTG...GTTTATAGGACAACTTAAGCTGTTCTTCAGTTTGAAACATCTTTTCACCCAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp GGTTCAAGTTACTCAACAATTTTATTTACCCATTCTACACACACGCACACAAAAAGGATGCTGAAGCCCTaGCTTGCCAAATTCCAATTT +
Preference number: 5 (lower is better)
Translates to: GSSYSTILFTHSTHTHTKRMLKP*LAKFQF
Trigger: AAATTGGAATTTGGCAAGCAAGGGCTTCAGCATCCT...TTTTGTGTGCGTGTGTGTAGAATGGGTAAATAAAATTGTTGAGTAACTTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS-3UTR CAA 90 bp TCTCAAGGAGCTTTCTTGACTTACTCACGTGATATAAATGGCACTCTACTTTTCAGGTTGCTAAATGTTTaGAGGCACAGGGAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: SQGAFLTYSRDINGTLLFRLLNV*RHREVK
Trigger: TTTAACTTCCCTGTGCCTCAAAACATTTAGCAACCT...GAAAAGTAGAGTGCCATTTATATCACGTGAGTAAGTCAAGAAAGCTCCTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367079.3
CDS GCA 72 bp TCTCCTAAGATCCCTCCCTGCCTTGGCCCCGGCGCCTaGCCTGTAACGCGACCGAACCGAGCCGACAGCTTG +
Preference number: 6 (lower is better)
Translates to: SPKIPPCLGPGA*PVTRPNRADSL
Trigger: CAAGCTGTCGGCTCGGTTCGGTCGCGTTACAGGGCAGGCGCCGGGGCCAAGGCAGGGAGGGATCTTAGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367080.8
ENST00000464777.5
ENST00000468857.1
CDS CAA 90 bp CCAGGGCTGGAGGGAAACACACAGTTACACCACCGGAATGCTGACTaGGGTCTTCGGCTAGTCGGCCCCTTCTTGCATGTCCTGGGCACG +
Preference number: 6 (lower is better)
Translates to: PGLEGNTQLHHRNAD*GLRLVGPFLHVLGT
Trigger: CGTGCCCAGGACATGCAAGAAGGGGCCGACTAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCCCTCCAGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS TCA 72 bp GCTGGAGGGAAACACACAGTTACACCACCGGAATGCTaGCTTGGGTCTTCGGCTAGTCGGCCCCTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: AGGKHTVTPPEC*LGSSASRPLLA
Trigger: TGCAAGAAGGGGCCGACTAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCCCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS CAA 72 bp GAGGGAAACACACAGTTACACCACCGGAATGCTGACTaGGGTCTTCGGCTAGTCGGCCCCTTCTTGCATGTC +
Preference number: 6 (lower is better)
Translates to: EGNTQLHHRNAD*GLRLVGPFLHV
Trigger: GACATGCAAGAAGGGGCCGACTAGCCGAAGACCCAAGTCAGCATTCCGGTGGTGTAACTGTGTGTTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS CCA 72 bp GGGCTTGAGGGGCCGGCTCCCAACACTGTAATTTCTTaGACGCCTTATTGTATTCGAACTGGACAGAGGCGT +
Preference number: 6 (lower is better)
Translates to: GLEGPAPNTVIS*TPYCIRTGQRR
Trigger: ACGCCTCTGTCCAGTTCGAATACAATAAGGCGTCCAAGAAATTACAGTGTTGGGAGCCGGCCCCTCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS CAA 72 bp GGCCGTCTTGGAGGCTATGGAGCTGGATCAACTTCATaGACTTCATCCATGGGTGTGACTCTGGTTGCACTG +
Preference number: 6 (lower is better)
Translates to: GRLGGYGAGSTS*TSSMGVTLVAL
Trigger: CAGTGCAACCAGAGTCACACCCATGGATGAAGTCAATGAAGTTGATCCAGCTCCATAGCCTCCAAGACGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545806.5
CDS TCA 72 bp CGTCGAAGGAGGAGTCTTGAATCCAGCTTGTGCCCCTaGGATGAGACGCCTCATAGCACAAATTGTAGCAAG +
Preference number: 6 (lower is better)
Translates to: RRRRSLESSLCP*DETPHSTNCSK
Trigger: CTTGCTACAATTTGTGCTATGAGGCGTCTCATCTCAGGGGCACAAGCTGGATTCAAGACTCCTCCTTCGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411990.6
ENST00000615360.4
ENST00000618513.4
CDS CAA 90 bp ACTGGACAGAGGCGTAAAGCTGTTCCTTCTCATCCTTACAGGGGTTaGGTTCTTGGGGAAGTTGTTAGTTGGCTTGTCACGGTGCGTGTT +
Preference number: 6 (lower is better)
Translates to: TGQRRKAVPSHPYRG*VLGEVVSWLVTVRV
Trigger: AACACGCACCGTGACAAGCCAACTAACAACTTCCCCAAGAACCAAACCCCTGTAAGGATGAGAAGGAACAGCTTTACGCCTCTGTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367080.8
CDS GCA 72 bp GTGCTTACCAGAACCGTGGTCCCAGCAGACAACTCTTaGCTCTTTACTAGTGTGTACTATGTCGTCGAAGGA +
Preference number: 6 (lower is better)
Translates to: VLTRTVVPADNS*LFTSVYYVVEG
Trigger: TCCTTCGACGACATAGTACACACTAGTAAAGAGGCAAGAGTTGTCTGCTGGGACCACGGTTCTGGTAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615360.4
CDS CAA 72 bp TTTACTAGTGTGTACTATGTCGTCGAAGGAGGAGTCTaGAATCCAGCTTGTGCCCCTGAGATGAGACGCCTC +
Preference number: 6 (lower is better)
Translates to: FTSVYYVVEGGV*NPACAPEMRRL
Trigger: GAGGCGTCTCATCTCAGGGGCACAAGCTGGATTCAAGACTCCTCCTTCGACGACATAGTACACACTAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411990.6
ENST00000615360.4
ENST00000618513.4
CDS CAA 90 bp TCTTGCCTCTTTACTAGTGTGTACTATGTCGTCGAAGGAGGAGTCTaGAATCCAGCTTGTGCCCCTGAGATGAGACGCCTCATAGCACAA +
Preference number: 6 (lower is better)
Translates to: SCLFTSVYYVVEGGV*NPACAPEMRRLIAQ
Trigger: TTGTGCTATGAGGCGTCTCATCTCAGGGGCACAAGCTGGATTCAAGACTCCTCCTTCGACGACATAGTACACACTAGTAAAGAGGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411990.6
ENST00000615360.4
ENST00000618513.4
CDS TCA 72 bp CCCTCCCCACCAGGATATCGATACAGATACTTCTCTTaGTCTCGAAGTGCAAACTCTTCTGGGTACCGTTTC +
Preference number: 6 (lower is better)
Translates to: PSPPGYRYRYFS*SRSANSSGYRF
Trigger: GAAACGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTATCGATATCCTGGTGGGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473310.5
CDS GCA 72 bp TCAGATGTCAGAACCGTGGTCCCAGCAGACAACTCTTaGCTCTTTACTAGTGTGTACTATGTCGTCGAAGGA +
Preference number: 6 (lower is better)
Translates to: SDVRTVVPADNS*LFTSVYYVVEG
Trigger: TCCTTCGACGACATAGTACACACTAGTAAAGAGGCAAGAGTTGTCTGCTGGGACCACGGTTCTGACATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411990.6
ENST00000618513.4
CDS CAA 90 bp CCACTTTGCACCCTCCCCACCAGGATATCGATACAGATACTTCTCTaGATCTCGAAGTGCAAACTCTTCTGGGTACCGTTTCTCAATCTC +
Preference number: 6 (lower is better)
Translates to: PLCTLPTRISIQILL*ISKCKLFWVPFLNL
Trigger: GAGATTGAGAAACGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTATCGATATCCTGGTGGGGAGGGTGCAAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473310.5
CDS CAA 72 bp ACCCTCCCCACCAGGATATCGATACAGATACTTCTCTaGATCTCGAAGTGCAAACTCTTCTGGGTACCGTTT +
Preference number: 6 (lower is better)
Translates to: TLPTRISIQILL*ISKCKLFWVPF
Trigger: AAACGGTACCCAGAAGAGTTTGCACTTCGAGATCAAGAGAAGTATCTGTATCGATATCCTGGTGGGGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473310.5
CDS TCA 72 bp CTTCAGATGTCTGTAAAATGTGGTGAAAAACAGGTTTaGTGGCCGTCTTGGAGGCTATGGAGCTGGATCAAC +
Preference number: 6 (lower is better)
Translates to: LQMSVKCGEKQV*WPSWRLWSWIN
Trigger: GTTGATCCAGCTCCATAGCCTCCAAGACGGCCATCAAACCTGTTTTTCACCACATTTTACAGACATCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545806.5
CDS GCA 72 bp ATGCCGAAAGAAGTCGTAGGACTTATAGGACTTGACTaGTTCACGCCGATACACCCCAAGATTAAACACTGT +
Preference number: 6 (lower is better)
Translates to: MPKEVVGLIGLD*FTPIHPKIKHC
Trigger: ACAGTGTTTAATCTTGGGGTGTATCGGCGTGAAGCAGTCAAGTCCTATAAGTCCTACGACTTCTTTCGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411990.6
CDS CAA 90 bp CCGTCACTGCACTCCAGCAACATTTCTTCTCTGACATTCGAAGATTaGGGGTTTTGGTTTCATAGCTGTTGTTGTTCTGTTCTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: PSLHSSNISSLTFED*GFWFHSCCCSVLRK
Trigger: CTTCCTCAGAACAGAACAACAACAGCTATGAAACCAAAACCCCAAATCTTCGAATGTCAGAGAAGAAATGTTGCTGGAGTGCAGTGACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464777.5
CDS TCA 72 bp ATCAACCAGGAAGTCTTATTCTTTCAGGCTTTTGACTaGCTTTGGAAATCCTCCCTTTTCTGTAGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: INQEVLFFQAFD*LWKSSLFCSPG
Trigger: GCCTGGACTACAGAAAAGGGAGGATTTCCAAAGTCAGTCAAAAGCCTGAAAGAATAAGACTTCCTGGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615360.4
ENST00000618513.4
CDS CAA 90 bp TCATGTAGGAGGCCCATGAACATTTCTTCTCTGACATTCGAAGATTaGGGGTTTTGGTTTCATAGCTGTTGTTGTTCTGTTCTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: SCRRPMNISSLTFED*GFWFHSCCCSVLRK
Trigger: CTTCCTCAGAACAGAACAACAACAGCTATGAAACCAAAACCCCAAATCTTCGAATGTCAGAGAAGAAATGTTCATGGGCCTCCTACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367079.3
ENST00000367080.8
ENST00000411990.6
ENST00000545806.5
ENST00000618513.4
CDS CAA 90 bp CTCTCTGCCAGAACTCACAACATTTCTTCTCTGACATTCGAAGATTaGGGGTTTTGGTTTCATAGCTGTTGTTGTTCTGTTCTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: LSARTHNISSLTFED*GFWFHSCCCSVLRK
Trigger: CTTCCTCAGAACAGAACAACAACAGCTATGAAACCAAAACCCCAAATCTTCGAATGTCAGAGAAGAAATGTTGTGAGTTCTGGCAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468857.1