RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PFAS (Homo sapiens)

Ensembl gene IDs: ENSG00000178921

Ensembl transcript IDs: ENST00000314666.11, ENST00000546020.2, ENST00000578979.5, ENST00000580251.1, ENST00000580356.5, ENST00000581242.3, ENST00000583059.1, ENST00000584044.5, ENST00000585183.5, ENST00000625942.1

Found 790 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACACGGGCAGCACGGCGCCCTCCATCCCTCGCAGCATCAGGGCTaGCCCAGGCCCCACACGCACGCTGGCCCAGCGAGACTCGTAGCG +
Preference number: 1 (lower is better)
Translates to: PHGQHGALHPSQHQG*PRPHTHAGPARLVA
Trigger: CGCTACGAGTCTCGCTGGGCCAGCGTGCGTGTGGGGCCTGGGCCAGCCCTGATGCTGCGAGGGATGGAGGGCGCCGTGCTGCCCGTGTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CCATCCCTCGCAGCATCAGGGCTGGCCCAGGCCCCACACGCACGCTaGCCCAGCGAGACTCGTAGCGCCCAGACAGGTTGTGGCGTAGCA +
Preference number: 1 (lower is better)
Translates to: PSLAASGLAQAPHAR*PSETRSAQTGCGVA
Trigger: TGCTACGCCACAACCTGTCTGGGCGCTACGAGTCTCGCTGGGCCAGCGTGCGTGTGGGGCCTGGGCCAGCCCTGATGCTGCGAGGGATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 90 bp AGCAATAGCCGGCAGTGCCAGCCACCACGTGGGCCCCGCGGCCTGTaGACTGGACATCTCGAATCCGGCCCCCTGTGCCAGTGGTTGCAC +
Preference number: 1 (lower is better)
Translates to: SNSRQCQPPRGPRGL*TGHLESGPLCQWLH
Trigger: GTGCAACCACTGGCACAGGGGGCCGGATTCGAGATGTCCAGTGCACAGGCCGCGGGGCCCACGTGGTGGCTGGCACTGCCGGCTATTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CATCGGCCATCTCCCGGTCTCCATTACTGCCCTCCTCTCGCAAGATaGCGACTCGGGGGCTGGGACCACCAGGCTCACGGGGCACGGAGG +
Preference number: 1 (lower is better)
Translates to: HRPSPGLHYCPPLAR*RLGGWDHQAHGARR
Trigger: CCTCCGTGCCCCGTGAGCCTGGTGGTCCCAGCCCCCGAGTCGCCATCTTGCGAGAGGAGGGCAGTAATGGAGACCGGGAGATGGCCGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 90 bp ACCCAGGAGCCCGCACGGTCTCAGTGCCAACCCGAGCAGCCATGCTaGGGGAGTCCTTGCCACCATCCACTGCCACACCCAGGGCTGCCA +
Preference number: 1 (lower is better)
Translates to: TQEPARSQCQPEQPC*GSPCHHPLPHPGLP
Trigger: TGGCAGCCCTGGGTGTGGCAGTGGATGGTGGCAAGGACTCCCTCAGCATGGCTGCTCGGGTTGGCACTGAGACCGTGCGGGCTCCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CGCCCAGACAGGTTGTGGCGTAGCAGAAGGCCTGGCCGGGCTGGCTaGGAGTCAGGGCCCATCTCTGCAGCATCCTCATTGGGGTCGCCT +
Preference number: 1 (lower is better)
Translates to: RPDRLWRSRRPGRAG*ESGPISAASSLGSP
Trigger: AGGCGACCCCAATGAGGATGCTGCAGAGATGGGCCCTGACTCCCAGCCAGCCCGGCCAGGCCTTCTGCTACGCCACAACCTGTCTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp TCCTCCTCTGCCACACAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTaGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGC +
Preference number: 1 (lower is better)
Translates to: SSSATQRGSACSRSS*KLVSSQRARSSPTG
Trigger: GCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTGTGTGGCAGAGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
3UTR CCA 90 bp AACATGATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTaGAGGCCCAAGGAGCGGGCGAAGCCAGCCAGCACTGGTTCCCCA +
Preference number: 1 (lower is better)
Translates to: NMMGLIHSRRWPSGS*RPKERAKPASTGSP
Trigger: TGGGGAACCAGTGCTGGCTGGCTTCGCCCGCTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGGCCGTCTaGGAGCTGGAGGCCCAAGGAGCGGGCGAAGCCAGCCAGCACTGG +
Preference number: 1 (lower is better)
Translates to: PTKHDGLDPLTPLAV*ELEAQGAGEASQHW
Trigger: CCAGTGCTGGCTGGCTTCGCCCGCTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTaGCCGTCTGGGAGCTGGAGGCCCAAGGAGCGGGCGAAGCCAGCC +
Preference number: 1 (lower is better)
Translates to: PMPPLNMMGLIHSRR*PSGSWRPKERAKPA
Trigger: GGCTGGCTTCGCCCGCTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CCTGGTGCACGCTCAGCCCTGGGGGCAAGGCCAGAGGCTGCAGCATaGGGGGCTTCCTCTGCAGGAAGAACTCCTTCCGAGGCATCTTGC +
Preference number: 1 (lower is better)
Translates to: PGARSALGARPEAAA*GASSAGRTPSEASC
Trigger: GCAAGATGCCTCGGAAGGAGTTCTTCCTGCAGAGGAAGCCCCCCATGCTGCAGCCTCTGGCCTTGCCCCCAGGGCTGAGCGTGCACCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTaGCTCCTCAGCGAACAGCACAGACAGGACATCAACCCTGGGGAC +
Preference number: 1 (lower is better)
Translates to: QHLGQVWLLHLQHEA*LLSEQHRQDINPGD
Trigger: GTCCCCAGGGTTGATGTCCTGTCTGTGCTGTTCGCTGAGGAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 90 bp AGCCGAGCAGAGCCAGCAGTTGACAGCCATTACACACGCCCAGGCTaGAGGTGTCTGGCCGCTTCCGGAAGCGCCTCAGCTCAGCCCCAG +
Preference number: 1 (lower is better)
Translates to: SRAEPAVDSHYTRPG*RCLAASGSASAQPQ
Trigger: CTGGGGCTGAGCTGAGGCGCTTCCGGAAGCGGCCAGACACCTTCAGCCTGGGCGTGTGTAATGGCTGTCAACTGCTGGCTCTGCTCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 90 bp GAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATaGCCACTGCCAAGGCCTAACGGCCCGCTCAGGGTGAGGCATGAC +
Preference number: 1 (lower is better)
Translates to: EPGGGGQSIKWRGSP*PLPRPNGPLRVRHD
Trigger: GTCATGCCTCACCCTGAGCGGGCCGTTAGGCCTTGGCAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR GCA 90 bp TCCTCATGGCTCAGTGCCACAACCGCTACATCTGCCAGAGGAGTTTaGAGGGGCCCCACGCACTGCTGCTGGGCCACCAGGCCTCCCACA +
Preference number: 1 (lower is better)
Translates to: SSWLSATTATSARGV*RGPTHCCWATRPPT
Trigger: TGTGGGAGGCCTGGTGGCCCAGCAGCAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGATGTAGCGGTTGTGGCACTGAGCCATGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTaGCTCCTCAGCGAACAGCACAGACAGGACTGGGAGAGCAATGTG +
Preference number: 1 (lower is better)
Translates to: QHLGQVWLLHLQHEA*LLSEQHRQDWESNV
Trigger: CACATTGCTCTCCCAGTCCTGTCTGTGCTGTTCGCTGAGGAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR TCA 90 bp TCCTCATTGGGGTCGCCTCCCACCCAGCCGAGCAGAGCCAGCAGTTaGCAGCCATTACACACGCCCAGGCTGAAGGTGTCTGGCCGCTTC +
Preference number: 1 (lower is better)
Translates to: SSLGSPPTQPSRASS*QPLHTPRLKVSGRF
Trigger: GAAGCGGCCAGACACCTTCAGCCTGGGCGTGTGTAATGGCTGTCAACTGCTGGCTCTGCTCGGCTGGGTGGGAGGCGACCCCAATGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 90 bp CTCACAGGCATCCGCCAAAGCTGCGCCCTCCCCTGGGAGCTTGGCTaGCCACATCCAGTTCCCGCTACACTTCACATCCCGGAGGTCAGT +
Preference number: 1 (lower is better)
Translates to: LTGIRQSCALPWELG*PHPVPATLHIPEVS
Trigger: ACTGACCTCCGGGATGTGAAGTGTAGCGGGAACTGGATGTGGGCAGCCAAGCTCCCAGGGGAGGGCGCAGCTTTGGCGGATGCCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 90 bp ACCCAGCTAAGTGGAAGGCATCGGCCATCTCCCGGTCTCCATTACTaGCCTCCTCTCGCAAGATGGCGACTCGGGGGCTGGGACCACCAG +
Preference number: 1 (lower is better)
Translates to: TQLSGRHRPSPGLHY*PPLARWRLGGWDHQ
Trigger: CTGGTGGTCCCAGCCCCCGAGTCGCCATCTTGCGAGAGGAGGGCAGTAATGGAGACCGGGAGATGGCCGATGCCTTCCACTTAGCTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CCTGGCTCCTCAGCGAACAGCACAGACAGGACTGGGAGAGCAATGTaGGGAGTCAGGGGGATGCAAGAAGGGCCAAGGGAGTTGGGGCGG +
Preference number: 1 (lower is better)
Translates to: PGSSANSTDRTGRAM*GVRGMQEGPRELGR
Trigger: CCGCCCCAACTCCCTTGGCCCTTCTTGCATCCCCCTGACTCCCCACATTGCTCTCCCAGTCCTGTCTGTGCTGTTCGCTGAGGAGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR GCA 90 bp CATGCTGAGGGAGTCCTTGCCACCATCCACTGCCACACCCAGGGCTaGCATCACTGCCACCATAGCCTCACAGGCATCCGCCAAAGCTGC +
Preference number: 1 (lower is better)
Translates to: HAEGVLATIHCHTQG*HHCHHSLTGIRQSC
Trigger: GCAGCTTTGGCGGATGCCTGTGAGGCTATGGTGGCAGTGATGGCAGCCCTGGGTGTGGCAGTGGATGGTGGCAAGGACTCCCTCAGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CTCCAGCACGAGGCCTGGCTCCTCAGCGAACAGCACAGACAGGACTaGGAGAGCAATGTGGGGAGTCAGGGGGATGCAAGAAGGGCCAAG +
Preference number: 1 (lower is better)
Translates to: LQHEAWLLSEQHRQD*ESNVGSQGDARRAK
Trigger: CTTGGCCCTTCTTGCATCCCCCTGACTCCCCACATTGCTCTCCCAGTCCTGTCTGTGCTGTTCGCTGAGGAGCCAGGCCTCGTGCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR CCA 90 bp TGCCACCATAGCCTCACAGGCATCCGCCAAAGCTGCGCCCTCCCCTaGGAGCTTGGCTGCCCACATCCAGTTCCCGCTACACTTCACATC +
Preference number: 1 (lower is better)
Translates to: CHHSLTGIRQSCALP*ELGCPHPVPATLHI
Trigger: GATGTGAAGTGTAGCGGGAACTGGATGTGGGCAGCCAAGCTCCCAGGGGAGGGCGCAGCTTTGGCGGATGCCTGTGAGGCTATGGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp ATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATaGAGGGGGTCGCCATGCCCACTGCCAAGGCCTAACGGCCCGCTC +
Preference number: 1 (lower is better)
Translates to: IDKELEPGGGGQSIK*RGSPCPLPRPNGPL
Trigger: GAGCGGGCCGTTAGGCCTTGGCAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR CCA 90 bp AGTGATGCTGAAGGCCCGCACCAAGTTCTCAGGAAGGTCCAGGTCTaGAGGGTGTTCCCCAAGCTGGGAGAAGCACTGGGCCAGAGCTGT +
Preference number: 1 (lower is better)
Translates to: SDAEGPHQVLRKVQV*RVFPKLGEALGQSC
Trigger: ACAGCTCTGGCCCAGTGCTTCTCCCAGCTTGGGGAACACCCTCCAGACCTGGACCTTCCTGAGAACTTGGTGCGGGCCTTCAGCATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 90 bp ACAGTGAGTGCACCAGCTTCTGCCCATCCACGTGGAGCTGGCCCTTaGAGAACCAGTGTCGGCTGTGCTCGCTATTGGACTGCGCCAAGT +
Preference number: 1 (lower is better)
Translates to: TVSAPASAHPRGAGP*RTSVGCARYWTAPS
Trigger: ACTTGGCGCAGTCCAATAGCGAGCACAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAAGCTGGTGCACTCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 90 bp GAAGGCTGCAGATGGGGTTTCCCTTGGGGGCCTCCACACAAGCCCTaGTCACACGGTTCATCTTCTGTTCCATCTCCGGGTCTCCTCGCT +
Preference number: 1 (lower is better)
Translates to: EGCRWGFPWGPPHKP*SHGSSSVPSPGLLA
Trigger: AGCGAGGAGACCCGGAGATGGAACAGAAGATGAACCGTGTGATCAGGGCTTGTGTGGAGGCCCCCAAGGGAAACCCCATCTGCAGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 90 bp ATGGTGCCCACGAAGCAAGCCGGGCAACGTTCACGGGCACTGACATaGGTCAGGAAGTCCCGGTTGGGGGACCTCAGCAGAAGAGCATTT +
Preference number: 1 (lower is better)
Translates to: MVPTKQAGQRSRALT*VRKSRLGDLSRRAF
Trigger: AAATGCTCTTCTGCTGAGGTCCCCCAACCGGGACTTCCTGACTCATGTCAGTGCCCGTGAACGTTGCCCGGCTTGCTTCGTGGGCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 90 bp GGCTGTGCTCGCTATTGGACTGCGCCAAGTCAAAGGCCTCCACAGTaGTCGGGTTCCGCTGTAGCTCCTGGAAGCGCTTGGTGTAGAAGT +
Preference number: 1 (lower is better)
Translates to: GCARYWTAPSQRPPQ*SGSAVAPGSAWCRS
Trigger: ACTTCTACACCAAGCGCTTCCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTGACTTGGCGCAGTCCAATAGCGAGCACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTaGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGC +
Preference number: 1 (lower is better)
Translates to: QQLPSRVQFRALIKS*SQGEVVRVSNGGGR
Trigger: GCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR GCA 90 bp TCCTGGGTGCTCATGATGGACTCAAACAGTGAGTGCACCAGCTTCTaGCCATCCACGTGGAGCTGGCCCTTGAAGAACCAGTGTCGGCTG +
Preference number: 1 (lower is better)
Translates to: SWVLMMDSNSECTSF*PSTWSWPLKNQCRL
Trigger: CAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATCATGAGCACCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 90 bp GCCTGTGCACTGGACATCTCGAATCCGGCCCCCTGTGCCAGTGGTTaGACCACTAAAGGGGCATACTCCTGTGGGAAAGTTGTGAGTCTC +
Preference number: 1 (lower is better)
Translates to: ACALDISNPAPCASG*TTKGAYSCGKVVSL
Trigger: GAGACTCACAACTTTCCCACAGGAGTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGGGGCCGGATTCGAGATGTCCAGTGCACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp GACTCAAACAGTGAGTGCACCAGCTTCTGCCCATCCACGTGGAGCTaGCCCTTGAAGAACCAGTGTCGGCTGTGCTCGCTATTGGACTGC +
Preference number: 1 (lower is better)
Translates to: DSNSECTSFCPSTWS*PLKNQCRLCSLLDC
Trigger: GCAGTCCAATAGCGAGCACAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 90 bp GAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACACCGGTaGTCACTGGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGG +
Preference number: 1 (lower is better)
Translates to: ERKTSLRAKEAIAHR*SLGVVKWATEAPVR
Trigger: CCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR TCA 90 bp GTTGGGGTTCGAGGATTCCTGGGTGCTCATGATGGACTCAAACAGTaGGTGCACCAGCTTCTGCCCATCCACGTGGAGCTGGCCCTTGAA +
Preference number: 1 (lower is better)
Translates to: VGVRGFLGAHDGLKQ*VHQLLPIHVELALE
Trigger: TTCAAGGGCCAGCTCCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 90 bp GGGTTCGAGGATTCCTGGGTGCTCATGATGGACTCAAACAGTGAGTaGACCAGCTTCTGCCCATCCACGTGGAGCTGGCCCTTGAAGAAC +
Preference number: 1 (lower is better)
Translates to: GFEDSWVLMMDSNSE*TSFCPSTWSWPLKN
Trigger: GTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 90 bp CTTCCTTTCCCTGGATTGCACTGTGGACATACCCGTCATGGACCTTaGTTCCTTTCTGGGACCTACACTAACCCAACCAGGGCCTGGGGC +
Preference number: 1 (lower is better)
Translates to: LPFPGLHCGHTRHGP*FLSGTYTNPTRAWG
Trigger: GCCCCAGGCCCTGGTTGGGTTAGTGTAGGTCCCAGAAAGGAAGCAAGGTCCATGACGGGTATGTCCACAGTGCAATCCAGGGAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 90 bp CTGATCACACGGTTCATCTTCTGTTCCATCTCCGGGTCTCCTCGCTaGACAGCCCCAAAGTCCAGGTCACTGGTGTTATCTCCCTGCACC +
Preference number: 1 (lower is better)
Translates to: LITRFIFCSISGSPR*TAPKSRSLVLSPCT
Trigger: GGTGCAGGGAGATAACACCAGTGACCTGGACTTTGGGGCTGTGCAGCGAGGAGACCCGGAGATGGAACAGAAGATGAACCGTGTGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 90 bp CCAAGGAGCGGGCGAAGCCAGCCAGCACTGGTTCCCCAAACTTGTTaGCATAGTCAGAAGCTCCATTACTGGCTTCAATGGCAACCTCCA +
Preference number: 1 (lower is better)
Translates to: PRSGRSQPALVPQTC*HSQKLHYWLQWQPP
Trigger: TGGAGGTTGCCATTGAAGCCAGTAATGGAGCTTCTGACTATGGCAACAAGTTTGGGGAACCAGTGCTGGCTGGCTTCGCCCGCTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp ATGATGGACTCAAACAGTGAGTGCACCAGCTTCTGCCCATCCACGTaGAGCTGGCCCTTGAAGAACCAGTGTCGGCTGTGCTCGCTATTG +
Preference number: 1 (lower is better)
Translates to: MMDSNSECTSFCPST*SWPLKNQCRLCSLL
Trigger: CAATAGCGAGCACAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp ACCTTTACAACTTCCATGCCTGGCTCTGGGGCCTCCTTGCTTATGTaGTCAGCTTCCATGGACCCAATGCCCCCACTAAACATGATGGGC +
Preference number: 1 (lower is better)
Translates to: TFTTSMPGSGASLLM*SASMDPMPPLNMMG
Trigger: GCCCATCATGTTTAGTGGGGGCATTGGGTCCATGGAAGCTGACCACATAAGCAAGGAGGCCCCAGAGCCAGGCATGGAAGTTGTAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 90 bp CTGTTATCACAGAATTTGAGGACGTTGTTGGGGTTCGAGGATTCCTaGGTGCTCATGATGGACTCAAACAGTGAGTGCACCAGCTTCTGC +
Preference number: 1 (lower is better)
Translates to: LLSQNLRTLLGFEDS*VLMMDSNSECTSFC
Trigger: GCAGAAGCTGGTGCACTCACTGTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 90 bp GAGAAATCCAGAAAGTTTCAGTTCCAGATGAGAACAATGAGGTGGTaGGGGGCTGATCTGCATACTATTGCTGAATTTGTCTGCACCCGC +
Preference number: 1 (lower is better)
Translates to: EKSRKFQFQMRTMRW*GADLHTIAEFVCTR
Trigger: GCGGGTGCAGACAAATTCAGCAATAGTATGCAGATCAGCCCCTCACCACCTCATTGTTCTCATCTGGAACTGAAACTTTCTGGATTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR GCA 90 bp AGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCAGTaGAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAG +
Preference number: 1 (lower is better)
Translates to: RNAEKLPQATIPYIQ*SVALQEKSRKFQFQ
Trigger: CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR CCA 90 bp AGCGAGACTCGTAGCGCCCAGACAGGTTGTGGCGTAGCAGAAGGCCTGGCCGGGGTGCCAGCCACCACGTaGGCCCCGCGGCCTGTGCAC +
Preference number: 2 (lower is better)
Translates to: SETRSAQTGCGVAEGLAGVPATT*APRPVH
Trigger: GTGCACAGGCCGCGGGGCCCACGTGGTGGCTGGCAC...CCCGGCCAGGCCTTCTGCTACGCCACAACCTGTCTGGGCGCTACGAGTCTCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp TTCAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTGGCTCCACGGCCCGCTCAGGGTaGGGCATGACAGCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: FSTWARSGSCTSSTRPGSTARSG*GMTARW
Trigger: CCACCTGGCTGTCATGCCTCACCCTGAGCGGGCCGT...GGAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CACAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGACTGACACCCGGACCATaGCGTGGGGCCCGGCCTCGC +
Preference number: 2 (lower is better)
Translates to: HSEALPVAGPAGNSSPPRLTPGP*RGARPR
Trigger: GCGAGGCCGGGCCCCACGCCATGGTCCGGGTGTCAG...TCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
3UTR-3UTR CCA 90 bp TGCGCACTCCACACGGGCAGCACGGCGCCCTCCATCCCTCGCAGCATCAGGGCTCAGGCTGAAGGTGTCTaGCCGCTTCCGGAAGCGCCT +
Preference number: 2 (lower is better)
Translates to: CALHTGSTAPSIPRSIRAQAEGV*PLPEAP
Trigger: AGGCGCTTCCGGAAGCGGCCAGACACCTTCAGCCTG...AGCCCTGATGCTGCGAGGGATGGAGGGCGCCGTGCTGCCCGTGTGGAGTGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CAA 90 bp CTCCTCATGGCTCAGTGCCACAACCGCTACATCTGCCAGAGGAGTTaGCAGGGGCCCCACGCACTGCTGCTGGGCCACCAGGCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: LLMAQCHNRYICQRS*QGPHALLLGHQASH
Trigger: GTGGGAGGCCTGGTGGCCCAGCAGCAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGATGTAGCGGTTGTGGCACTGAGCCATGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CAA 90 bp CGCACGGTCTCAGTGCCAACCCGAGCAGCCATGCTGAGGGAGTCCTaGCCACCATCCACTGCCACACCCAGGGCTGCCATCACTGCCACC +
Preference number: 2 (lower is better)
Translates to: RTVSVPTRAAMLRES*PPSTATPRAAITAT
Trigger: GGTGGCAGTGATGGCAGCCCTGGGTGTGGCAGTGGATGGTGGCAAGGACTCCCTCAGCATGGCTGCTCGGGTTGGCACTGAGACCGTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp CAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGCATCACAGGAGCAGATaGCAGCCACGCCCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: QRGSACSRSSWKLVSSQRHHRSR*QPRPLG
Trigger: CCCCAGGGGGCGTGGCTGGCATCTGCTCCTGTGATG...CCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp TCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCTGGAGGGGGTCGCCATaGCCACTGCCAAGGCCTAAC +
Preference number: 2 (lower is better)
Translates to: SQRARSSPTGSSRTTAPFWRGSP*PLPRPN
Trigger: GTTAGGCCTTGGCAGTGGGCATGGCGACCCCCTCCA...GAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCGGCATGACAGCCAGGTaGCGGCCATCACAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: RSSWKLVSSQRARSSPTGGMTAR*RPSQEQ
Trigger: CTGCTCCTGTGATGGCCGCCACCTGGCTGTCATGCC...GCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp GCCGCCCACGAAGGCCACGCCACGGAAAGTGTCCAGCCCAATTGCCCCAGAGCACCAGGTGAGCCCCTGTaGCCAGTCAGCAGCTCCCTT +
Preference number: 2 (lower is better)
Translates to: AAHEGHATESVQPNCPRAPGEPL*PVSSSL
Trigger: AAGGGAGCTGCTGACTGGCCACAGGGGCTCACCTGG...TGCTCTGGGGCAATTGGGCTGGACACTTTCCGTGGCGTGGCCTTCGTGGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CCGAGGCATCTTGCCCAGCACCCATTCGAGCTCCAGGTCCACAGGGGTTGGCAGAGCGGCTTGGCCGTGTaGGGTCCTCAGGCCGTAGGA +
Preference number: 2 (lower is better)
Translates to: PRHLAQHPFELQVHRGWQSGLAV*GPQAVG
Trigger: TCCTACGGCCTGAGGACCCCACACGGCCAAGCCGCT...CTGCCAACCCCTGTGGACCTGGAGCTCGAATGGGTGCTGGGCAAGATGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGATCCACTCACGCCGCTaGCCGTCTGGGAGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: QRGSACSRSSWKLVSSQRIHSRR*PSGSWR
Trigger: CCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGAT...CCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp AGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGCGCCCCACACGCACGCTaGCCCAGCGAGACTCGTAGC +
Preference number: 2 (lower is better)
Translates to: SQGEVVRVSNGGGRHAHCAPHAR*PSETRS
Trigger: GCTACGAGTCTCGCTGGGCCAGCGTGCGTGTGGGGC...GCAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp CGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCCAGGACCCACTTAGGTaGAAAGCCATGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: RSSWKLVSSQRARSSPTGQDPLR*KAMGPR
Trigger: CCTGGGCCCCATGGCTTTTCACCTAAGTGGGTCCTG...GCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp CAGCTCCAGGCAATGGAGGCCAGCATCCCGGTAACGCTTCAGCACCTGGGCCAGAGGGATCAGGGAGGATaGGGGCTAGGACGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: QLQAMEASIPVTLQHLGQRDQGG*GLGRQD
Trigger: GTCCTGCCGTCCTAGCCCTCATCCTCCCTGATCCCT...CTGGCCCAGGTGCTGAAGCGTTACCGGGATGCTGGCCTCCATTGCCTGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR-3UTR GCA 90 bp CACAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGCCAGGTCTGGCTCCTaGACCTCCAGCACGAGGCCT +
Preference number: 2 (lower is better)
Translates to: HSEALPVAGPAGNSSPPRARSGS*TSSTRP
Trigger: AGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGC...TCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
3UTR-3UTR GCA 90 bp ATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGGAGGCCCAAGGAGCTCAGCCCTTGCTGTTaGTGGAAGCGGCTTGGCCGT +
Preference number: 2 (lower is better)
Translates to: MGLIHSRRWPSGSWRPKELSPCC*WKRLGR
Trigger: ACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGAG...CTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CAGCTCCAGGCAATGGAGGCCAGCATCCCGGTAACGCTTCAGCACCTGGGCCAGCTCCAGCACGAGGCCTaGCTCCTCAGCGAACAGCAC +
Preference number: 2 (lower is better)
Translates to: QLQAMEASIPVTLQHLGQLQHEA*LLSEQH
Trigger: GTGCTGTTCGCTGAGGAGCCAGGCCTCGTGCTGGAG...CTGGCCCAGGTGCTGAAGCGTTACCGGGATGCTGGCCTCCATTGCCTGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
3UTR CAA 90 bp CTACACTTCACATCCCGGAGGTCAGTGACCAGAGCAAACACCAGGTaGGTGAGGGCTTCGGCCACGGCCAGCCGGGCGGCGACTTTTGGG +
Preference number: 2 (lower is better)
Translates to: LHFTSRRSVTRANTR*VRASATASRAATFG
Trigger: CCCAAAAGTCGCCGCCCGGCTGGCCGTGGCCGAAGCCCTCACCAACCTGGTGTTTGCTCTGGTCACTGACCTCCGGGATGTGAAGTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp GCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCACGTGGAGCTGGCCCTTaGAGAACCAGTGTCGGCTGT +
Preference number: 2 (lower is better)
Translates to: ALPVAGPAGNSSPPRGLARGAGP*RTSVGC
Trigger: ACAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACG...TGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp CAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGTCTTTCAGCAGCCCCTaGGTGATGCTGAAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: QRGSACSRSSWKLVSSQRSFSSP*VMLKAR
Trigger: GCGGGCCTTCAGCATCACTCAGGGGCTGCTGAAAGA...CCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp AGAAGAAAATGCTACGTAACCTTCCCCGTGCGCACTCCACACGGGCAGCACGGCGGTCGCCATGCCCACTaGCAAGGCCTAACGGCCCGC +
Preference number: 2 (lower is better)
Translates to: RRKCYVTFPVRTPHGQHGGRHAH*QGLTAR
Trigger: GCGGGCCGTTAGGCCTTGGCAGTGGGCATGGCGACC...GCCGTGCTGCCCGTGTGGAGTGCGCACGGGGAAGGTTACGTAGCATTTTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp ATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGGAGGCCCAAGGAGCAAAGGCCTCCACAGTaGTCGGGTTCCGCTGTAGCT +
Preference number: 2 (lower is better)
Translates to: MGLIHSRRWPSGSWRPKEQRPPQ*SGSAVA
Trigger: AGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTG...CTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp TTCAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTGGCTCCGGAGCCAGGGGGAGGTaGTCAGAGTATCAAATGGAG +
Preference number: 2 (lower is better)
Translates to: FSTWARSGSCTSSTRPGSGARGR*SEYQME
Trigger: CTCCATTTGATACTCTGACCACCTCCCCCTGGCTCC...GGAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CTGATCACACGGTTCATCTTCTGTTCCATCTCCGGGTCTCCTCGCTGCACAGCCAACCCAACCAGGGCCTaGGGCCTCCCCTCCCCGGGT +
Preference number: 2 (lower is better)
Translates to: LITRFIFCSISGSPRCTANPTRA*GLPSPG
Trigger: ACCCGGGGAGGGGAGGCCCCAGGCCCTGGTTGGGTT...GGCTGTGCAGCGAGGAGACCCGGAGATGGAACAGAAGATGAACCGTGTGATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp TCTCGAATCCGGCCCCCTGTGCCAGTGGTTGCACCACTAAAGGGGCATACTCCTCACAGCCCCGTTCACTaGCACCCGGACCATGGCGTG +
Preference number: 2 (lower is better)
Translates to: SRIRPPVPVVAPLKGHTPHSPVH*HPDHGV
Trigger: CACGCCATGGTCCGGGTGTCAGTGAACGGGGCTGTG...AGGAGTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGGGGCCGGATTCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp CCTCATTGGGGTCGCCTCCCACCCAGCCGAGCAGAGCCAGCAGTTGACAGCCATCATCCCGGAGGTCAGTaGCCAGAGCAAACACCAGGT +
Preference number: 2 (lower is better)
Translates to: PHWGRLPPSRAEPAVDSHHPGGQ*PEQTPG
Trigger: ACCTGGTGTTTGCTCTGGTCACTGACCTCCGGGATG...ATGGCTGTCAACTGCTGGCTCTGCTCGGCTGGGTGGGAGGCGACCCCAATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp TCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCGAAGTCTCAGAGGGGTaGAGTCAGGAACATGGTGGG +
Preference number: 2 (lower is better)
Translates to: SQRARSSPTGSSRTTAPFEVSEG*SQEHGG
Trigger: CCCACCATGTTCCTGACTGCACCCCTCTGAGACTTC...GAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR-3UTR CCA 90 bp CCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACGAGGGTACTGCTCTGTaGGGTTCCCGTCATCATCAG +
Preference number: 2 (lower is better)
Translates to: PEGSQLPNRLLQNHSPVHEGTAL*GSRHHQ
Trigger: CTGATGATGACGGGAACCCCACAGAGCAGTACCCTC...GTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGTGTAGCCGGTCCAGCTaGAAACTCGTCTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: QRGSACSRSSWKLVSSQRCSRSS*KLVSSQ
Trigger: CTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACA...CCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
3UTR-3UTR CCA 90 bp CCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACGGCTGTGCTCGCTATTaGACTGCGCCAAGTCAAAGG +
Preference number: 2 (lower is better)
Translates to: PEGSQLPNRLLQNHSPVHGCARY*TAPSQR
Trigger: CCTTTGACTTGGCGCAGTCCAATAGCGAGCACAGCC...GTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp AGGACACTCCCGATCGTCCACCAGCACTATTCTCCGGTCTCCAGTGATGGTGCCCCGCGGCCTGTGCACTaGACATCTCGAATCCGGCCC +
Preference number: 2 (lower is better)
Translates to: RTLPIVHQHYSPVSSDGAPRPVH*TSRIRP
Trigger: GGGCCGGATTCGAGATGTCCAGTGCACAGGCCGCGG...GGCACCATCACTGGAGACCGGAGAATAGTGCTGGTGGACGATCGGGAGTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CAA 90 bp TGGTCAGCTTCCATGGACCCAATGCCCCCACTAAACATGATGGGCTaGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGGAGGCCCAAG +
Preference number: 2 (lower is better)
Translates to: WSASMDPMPPLNMMG*IHSRRWPSGSWRPK
Trigger: CTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGGTCCATGGAAGCTGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp GTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAAGATGGACTCAAACAGTaGGTGCACCAGCTTCTGCCC +
Preference number: 2 (lower is better)
Translates to: VAGPAGNSSPPRGLAAPQDGLKQ*VHQLLP
Trigger: GGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATC...TTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTACTGGGCCAGAGCTGTaGCCCCGAGCCGGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGTGPEL*PRAGAA
Trigger: GGCAGCACCGGCTCGGGGGCACAGCTCTGGCCCAGT...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp GGACATCAACCCTGGGGACAGGCACATCCACCTGTAGCCCGCAATTTCCAGCAAGCCAGCCACGCCCCCTaGGGACCCATTGGGATTCAG +
Preference number: 2 (lower is better)
Translates to: GHQPWGQAHPPVARNFQQASHAP*GPIGIQ
Trigger: CTGAATCCCAATGGGTCCCCAGGGGGCGTGGCTGGC...TTGCTGGAAATTGCGGGCTACAGGTGGATGTGCCTGTCCCCAGGGTTGATGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp GCCGCCCACGAAGGCCACGCCACGGAAAGTGTCCAGCCCAATTGCCCCAGAGCATCAAACCCAGCTAAGTaGAAGGCATCGGCCATCTCC +
Preference number: 2 (lower is better)
Translates to: AAHEGHATESVQPNCPRASNPAK*KASAIS
Trigger: GGAGATGGCCGATGCCTTCCACTTAGCTGGGTTTGA...TGCTCTGGGGCAATTGGGCTGGACACTTTCCGTGGCGTGGCCTTCGTGGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp AGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGCGTGGAGCCAAGCCCCTaGCCTCAATCTGAGCTTGGA +
Preference number: 2 (lower is better)
Translates to: SQGEVVRVSNGGGRHAHCVEPSP*PQSELG
Trigger: TCCAAGCTCAGATTGAGGCCAGGGGCTTGGCTCCAC...GCAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp ATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGGAGGCCCAAGGAGTGTGAGTCTCTGCTGTaGAGACAACATGTCTCAGCC +
Preference number: 2 (lower is better)
Translates to: MGLIHSRRWPSGSWRPKECESLL*RQHVSA
Trigger: GGCTGAGACATGTTGTCTTCACAGCAGAGACTCACA...CTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp CACCTTATTGGTGAGGTAGCGCTTGCTGGCCACGGCGGGCAGCCTCAGAACCCTCCTGGCCATTTCTTCTaGCAGGACACTCCCGATCGT +
Preference number: 2 (lower is better)
Translates to: HLIGEVALAGHGGQPQNPPGHFF*QDTPDR
Trigger: ACGATCGGGAGTGTCCTGTCAGAAGAAATGGCCAGG...AGGGTTCTGAGGCTGCCCGCCGTGGCCAGCAAGCGCTACCTCACCAATAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTGGTCGCCATGCCCACTaGCAAGGCCTAACGGCCCGC +
Preference number: 2 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGGRHAH*QGLTAR
Trigger: GCGGGCCGTTAGGCCTTGGCAGTGGGCATGGCGACC...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR-3UTR CCA 90 bp GAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGGCTCCTGGAAGCGCTTaGTGTAGAAGTCTAGGTCCC +
Preference number: 2 (lower is better)
Translates to: EPGGGGQSIKWRGSPCPLAPGSA*CRSLGP
Trigger: GGGACCTAGACTTCTACACCAAGCGCTTCCAGGAGC...CAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp AGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGCCCATCCACGTGGAGCTaGCCCTTGAAGAACCAGTGT +
Preference number: 2 (lower is better)
Translates to: SQGEVVRVSNGGGRHAHCPSTWS*PLKNQC
Trigger: ACACTGGTTCTTCAAGGGCCAGCTCCACGTGGATGG...GCAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CCTCATTGGGGTCGCCTCCCACCCAGCCGAGCAGAGCCAGCAGTTGACAGCCATGGGTTCGAGGATTCCTaGGTGCTCATGATGGACTCA +
Preference number: 2 (lower is better)
Translates to: PHWGRLPPSRAEPAVDSHGFEDS*VLMMDS
Trigger: TGAGTCCATCATGAGCACCCAGGAATCCTCGAACCC...ATGGCTGTCAACTGCTGGCTCTGCTCGGCTGGGTGGGAGGCGACCCCAATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp ATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGGAGGCCCAAGGAGCGGACTTCCTTTCCCTaGATTGCACTGTGGACATAC +
Preference number: 2 (lower is better)
Translates to: MGLIHSRRWPSGSWRPKERTSFP*IALWTY
Trigger: GTATGTCCACAGTGCAATCCAGGGAAAGGAAGTCCG...CTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CAGAGCAGAGGTCCTGCATGGTCACGTCCCATACCTCAAACCCAGCTAAGTGGAAGCTGGGAGAAGCACTaGGCCAGAGCTGTGCCCCCG +
Preference number: 2 (lower is better)
Translates to: QSRGPAWSRPIPQTQLSGSWEKH*ARAVPP
Trigger: CGGGGGCACAGCTCTGGCCCAGTGCTTCTCCCAGCT...TCCACTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCAGGACCTCTGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CAA 90 bp AACAGTGAGTGCACCAGCTTCTGCCCATCCACGTGGAGCTGGCCCTaGAAGAACCAGTGTCGGCTGTGCTCGCTATTGGACTGCGCCAAG +
Preference number: 2 (lower is better)
Translates to: NSECTSFCPSTWSWP*KNQCRLCSLLDCAK
Trigger: CTTGGCGCAGTCCAATAGCGAGCACAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CAA 90 bp GGGAAAGTTGTGAGTCTCTGCTGTGAAGACAACATGTCTCAGCCCTaGCTGTTGCTGGAAGCGGCTTGGCCGTGTGGGGTCCTCAGGCCG +
Preference number: 2 (lower is better)
Translates to: GKVVSLCCEDNMSQP*LLLEAAWPCGVLRP
Trigger: CGGCCTGAGGACCCCACACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGAGACATGTTGTCTTCACAGCAGAGACTCACAACTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp CACAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGACTAGGACGGCAGGACTaGGGATGTTTCATCATGGAC +
Preference number: 2 (lower is better)
Translates to: HSEALPVAGPAGNSSPPRLGRQD*GCFIMD
Trigger: GTCCATGATGAAACATCCTCAGTCCTGCCGTCCTAG...TCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR-3UTR TCA 90 bp CCGAGGCATCTTGCCCAGCACCCATTCGAGCTCCAGGTCCACAGGGGTTGGCAGCCTGTGGGAAAGTTGTaGGTCTCTGCTGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: PRHLAQHPFELQVHRGWQPVGKL*VSAVKT
Trigger: TGTCTTCACAGCAGAGACTCACAACTTTCCCACAGG...CTGCCAACCCCTGTGGACCTGGAGCTCGAATGGGTGCTGGGCAAGATGCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCATCACAGGAGCAGATaGCAGCCACGCCCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGHHRSR*QPRPLG
Trigger: CCCCAGGGGGCGTGGCTGGCATCTGCTCCTGTGATG...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR-3UTR CCA 90 bp GGCCAGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGAGCCCTTGCTGTTGCTaGAAGCGGCTTGGCCGTGTG +
Preference number: 2 (lower is better)
Translates to: GQSAAPFQGPVSGIDKELSPCCC*KRLGRV
Trigger: CACACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCT...CAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CCGAGGCATCTTGCCCAGCACCCATTCGAGCTCCAGGTCCACAGGGGTTGGCAGAGGATACTGGAAGCTTaGATCCTCCCAGGGCAGATT +
Preference number: 2 (lower is better)
Translates to: PRHLAQHPFELQVHRGWQRILEA*ILPGQI
Trigger: AATCTGCCCTGGGAGGATCCAAGCTTCCAGTATCCT...CTGCCAACCCCTGTGGACCTGGAGCTCGAATGGGTGCTGGGCAAGATGCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp CCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACGATTATCGAGTCCGCTaGGATTTTGGCATTTTGGTC +
Preference number: 2 (lower is better)
Translates to: PEGSQLPNRLLQNHSPVHDYRVR*DFGILV
Trigger: GACCAAAATGCCAAAATCTCAGCGGACTCGATAATC...GTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp GGACATCAACCCTGGGGACAGGCACATCCACCTGTAGCCCGCAATTTCCAGCAAGGTCCACCTTATTGGTaGGGTAGCGCTTGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: GHQPWGQAHPPVARNFQQGPPYW*GSACWP
Trigger: TGGCCAGCAAGCGCTACCTCACCAATAAGGTGGACC...TTGCTGGAAATTGCGGGCTACAGGTGGATGTGCCTGTCCCCAGGGTTGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp GGCCAGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGTCATCATCAGCCCAGTaGAGTGGAGCCAAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: GQSAAPFQGPVSGIDKELSSSAQ*SGAKPL
Trigger: CAGGGGCTTGGCTCCACTGCACTGGGCTGATGATGA...CAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR-3UTR GCA 90 bp CATGGACCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGTCATCATCAGCCCAGTaGAGTGGAGCCAAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: HGPNAPTKHDGLDPLTPLSSSAQ*SGAKPL
Trigger: CAGGGGCTTGGCTCCACTGCACTGGGCTGATGATGA...CAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGGTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTTCTGCCAGAGGAGTTTaGAGGGGCCCCACGCACTGC +
Preference number: 2 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGSARGV*RGPTHC
Trigger: GCAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGA...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp TCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGGGCATGACAGCCAGGTaGCGGCCATCACAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: SGIDKELEPGGGGQSIKWGMTAR*RPSQEQ
Trigger: CTGCTCCTGTGATGGCCGCCACCTGGCTGTCATGCC...CCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR-3UTR CCA 90 bp GGCCAGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGTGTAGCCGGTCCAGCTaGAAACTCGTCTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GQSAAPFQGPVSGIDKELCSRSS*KLVSSQ
Trigger: CTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACA...CAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp TCTCGAATCCGGCCCCCTGTGCCAGTGGTTGCACCACTAAAGGGGCATACTCCTCCCTGGATTGCACTGTaGACATACCCGTCATGGACC +
Preference number: 2 (lower is better)
Translates to: SRIRPPVPVVAPLKGHTPPWIAL*TYPSWT
Trigger: GGTCCATGACGGGTATGTCCACAGTGCAATCCAGGG...AGGAGTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGGGGCCGGATTCGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CCGAGGCATCTTGCCCAGCACCCATTCGAGCTCCAGGTCCACAGGGGTTGGCAGCAGAAGCTCCATTACTaGCTTCAATGGCAACCTCCA +
Preference number: 2 (lower is better)
Translates to: PRHLAQHPFELQVHRGWQQKLHY*LQWQPP
Trigger: TGGAGGTTGCCATTGAAGCCAGTAATGGAGCTTCTG...CTGCCAACCCCTGTGGACCTGGAGCTCGAATGGGTGCTGGGCAAGATGCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CAGAGCAGAGGTCCTGCATGGTCACGTCCCATACCTCAAACCCAGCTAAGTGGAAGATGGGGTTTCCCTTaGGGGCCTCCACACAAGCCC +
Preference number: 2 (lower is better)
Translates to: QSRGPAWSRPIPQTQLSGRWGFP*GPPHKP
Trigger: GGGCTTGTGTGGAGGCCCCCAAGGGAAACCCCATCT...TCCACTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCAGGACCTCTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp CACCTTATTGGTGAGGTAGCGCTTGCTGGCCACGGCGGGCAGCCTCAGAACCCTATTCCTGGGTGCTCATaGTGGACTCAAACAGTGAGT +
Preference number: 2 (lower is better)
Translates to: HLIGEVALAGHGGQPQNPIPGCS*WTQTVS
Trigger: ACTCACTGTTTGAGTCCATCATGAGCACCCAGGAAT...AGGGTTCTGAGGCTGCCCGCCGTGGCCAGCAAGCGCTACCTCACCAATAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACCAGGAGGCAGAGGTTaGAGTGGGCCGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: VLRPALRQPETLRNFHKQPGGRG*SGPRSR
Trigger: GCGTGATCTCGGCCCACTGCAACCTCTGCCTCCTGG...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR GCA 90 bp GGCCAGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGGATTCAGAGGGTACTaGTCTGTGGGGTTCCCGTCA +
Preference number: 2 (lower is better)
Translates to: GQSAAPFQGPVSGIDKELGFRGY*SVGFPS
Trigger: TGACGGGAACCCCACAGAGCAGTACCCTCTGAATCC...CAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR-3UTR CCA 90 bp GGCCAGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGGAGCCAGGGGGAGGTaGTCAGAGTATCAAATGGAG +
Preference number: 2 (lower is better)
Translates to: GQSAAPFQGPVSGIDKELGARGR*SEYQME
Trigger: CTCCATTTGATACTCTGACCACCTCCCCCTGGCTCC...CAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR-3UTR CCA 90 bp GGACATCAACCCTGGGGACAGGCACATCCACCTGTAGCCCGCAATTTCCAGCAATACAACTTCCATGCCTaGCTCTGGGGCCTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: GHQPWGQAHPPVARNFQQYNFHA*LWGLLA
Trigger: AGCAAGGAGGCCCCAGAGCCAGGCATGGAAGTTGTA...TTGCTGGAAATTGCGGGCTACAGGTGGATGTGCCTGTCCCCAGGGTTGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp GGACATCAACCCTGGGGACAGGCACATCCACCTGTAGCCCGCAATTTCCAGCAACCTATGAGCTCCTCATaGCTCAGTGCCACAACCGCT +
Preference number: 2 (lower is better)
Translates to: GHQPWGQAHPPVARNFQQPMSSS*LSATTA
Trigger: AGCGGTTGTGGCACTGAGCCATGAGGAGCTCATAGG...TTGCTGGAAATTGCGGGCTACAGGTGGATGTGCCTGTCCCCAGGGTTGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp GGACATCAACCCTGGGGACAGGCACATCCACCTGTAGCCCGCAATTTCCAGCAACAGCAGGCTCTTGACTaGCTGTTCTCCCAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: GHQPWGQAHPPVARNFQQQQALD*LFSQGC
Trigger: ACAGCCTTGGGAGAACAGCCAGTCAAGAGCCTGCTG...TTGCTGGAAATTGCGGGCTACAGGTGGATGTGCCTGTCCCCAGGGTTGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCAGCTGCCCACCCTTTaGCAGAGCCCAGGACATCTG +
Preference number: 2 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGQLPTL*QSPGHL
Trigger: CAGATGTCCTGGGCTCTGCCAAAGGGTGGGCAGCTG...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp GAGAGCCCCAACCACCTCTATCAGAAACAGAGCTGCTGGGCCAGCTGTAGTGGCAGAACAATGAGGTGGTaGGGGGCTGATCTGCATACT +
Preference number: 2 (lower is better)
Translates to: ESPNHLYQKQSCWASCSGRTMRW*GADLHT
Trigger: AGTATGCAGATCAGCCCCTCACCACCTCATTGTTCT...GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATAGAGGTGGTTGGGGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR TCA 90 bp CACAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGATGTTATCACAGAATTTaGGGACGTTGTTGGGGTTCG +
Preference number: 2 (lower is better)
Translates to: HSEALPVAGPAGNSSPPRCYHRI*GRCWGS
Trigger: CGAACCCCAACAACGTCCTCAAATTCTGTGATAACA...TCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp CATGGACCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGGACTCAAACAGTGAGTaGACCAGCTTCTGCCCATCC +
Preference number: 2 (lower is better)
Translates to: HGPNAPTKHDGLDPLTPLDSNSE*TSFCPS
Trigger: GGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTC...CAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGGTCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp TCTCGAATCCGGCCCCCTGTGCCAGTGGTTGCACCACTAAAGGGGCATACTCCTTTCCTTTCCCTGGATTaGACTGTGGACATACCCGTC +
Preference number: 2 (lower is better)
Translates to: SRIRPPVPVVAPLKGHTPFLSLD*TVDIPV
Trigger: GACGGGTATGTCCACAGTGCAATCCAGGGAAAGGAA...AGGAGTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGGGGCCGGATTCGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CAGAGCAGAGGTCCTGCATGGTCACGTCCCATACCTCAAACCCAGCTAAGTGGAGCATTGATAAAGAGCTaGAGCCAGGGGGAGGTGGTC +
Preference number: 2 (lower is better)
Translates to: QSRGPAWSRPIPQTQLSGALIKS*SQGEVV
Trigger: GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGC...TCCACTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCAGGACCTCTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp AAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCGAGGATGTTTCATCATaGACATCTCAGGGATGGGAA +
Preference number: 2 (lower is better)
Translates to: KLVSSQRARSSPTGSSRTEDVSS*TSQGWE
Trigger: TTCCCATCCCTGAGATGTCCATGATGAAACATCCTC...GGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR-3UTR GCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCATGGAGGGGGTCGCCATaGCCACTGCCAAGGCCTAAC +
Preference number: 2 (lower is better)
Translates to: NDEKRERKTSLRAKEAIAWRGSP*PLPRPN
Trigger: GTTAGGCCTTGGCAGTGGGCATGGCGACCCCCTCCA...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546020.2
3UTR-3UTR CCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTTTCTGCCCATCCACGTaGAGCTGGCCCTTGAAGAAC +
Preference number: 2 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGFCPST*SWPLKN
Trigger: GTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAA...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CATGGACCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGAGGGGCATACTCCTGTaGGAAAGTTGTGAGTCTCTG +
Preference number: 2 (lower is better)
Translates to: HGPNAPTKHDGLDPLTPLRGILL*ESCESL
Trigger: CAGAGACTCACAACTTTCCCACAGGAGTATGCCCCT...CAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGGTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACAGGACCCACTTAGGTaGAAAGCCATGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: NDEKRERKTSLRAKEAIAQDPLR*KAMGPR
Trigger: CCTGGGCCCCATGGCTTTTCACCTAAGTGGGTCCTG...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR TCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTTGCTGTTTCCTGGGCTaGGAAAGGGCATGCCATGTT +
Preference number: 2 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGCCFLG*ERACHV
Trigger: AACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCA...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546020.2
3UTR-3UTR GCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCAAGCCAAGGAGGCAATTaGACACCGGTGATCACTGGG +
Preference number: 2 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPSQGGN*TPVITG
Trigger: CCCAGTGATCACCGGTGTGCAATTGCCTCCTTGGCT...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR GCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTACCCGTCATGGACCTTaGTTCCTTTCTGGGACCTAC +
Preference number: 2 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGTRHGP*FLSGTY
Trigger: GTAGGTCCCAGAAAGGAAGCAAGGTCCATGACGGGT...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR GCA 90 bp AGAAGAAAATGCTACGTAACCTTCCCCGTGCGCACTCCACACGGGCAGCACGGCGTTCCCCAAACTTGTTaGCATAGTCAGAAGCTCCAT +
Preference number: 2 (lower is better)
Translates to: RRKCYVTFPVRTPHGQHGVPQTC*HSQKLH
Trigger: ATGGAGCTTCTGACTATGGCAACAAGTTTGGGGAAC...GCCGTGCTGCCCGTGTGGAGTGCGCACGGGGAAGGTTACGTAGCATTTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CCA 90 bp CAACTCCAATCCTGTAGACGGGACCTCCAACCTTTACAACTTCCATGCCTGGCTGGTCAGAGTATCAAATaGAGGGGGTCGCCATGCCCA +
Preference number: 2 (lower is better)
Translates to: QLQSCRRDLQPLQLPCLAGQSIK*RGSPCP
Trigger: TGGGCATGGCGACCCCCTCCATTTGATACTCTGACC...AGCCAGGCATGGAAGTTGTAAAGGTTGGAGGTCCCGTCTACAGGATTGGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAAGCAATTGCACACCGGTaGTCACTGGGTGTTGTGAAG +
Preference number: 2 (lower is better)
Translates to: VLRPALRQPETLRNFHKQAIAHR*SLGVVK
Trigger: CTTCACAACACCCAGTGATCACCGGTGTGCAATTGC...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR CAA 90 bp CAGTCTAGGGCACAGCACCTGCTGTTATCACAGAATTTGAGGACGTaGTTGGGGTTCGAGGATTCCTGGGTGCTCATGATGGACTCAAAC +
Preference number: 2 (lower is better)
Translates to: QSRAQHLLLSQNLRT*LGFEDSWVLMMDSN
Trigger: GTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGGTGCTGTGCCCTAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACTGCTGTTTCCTGGGCTaGGAAAGGGCATGCCATGTT +
Preference number: 2 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNCCFLG*ERACHV
Trigger: AACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCA...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR TCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGGCTCAGGGTGAGGCATaGCAGCCAGGTGGCGGCCAT +
Preference number: 2 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQAQGEA*QPGGGH
Trigger: ATGGCCGCCACCTGGCTGTCATGCCTCACCCTGAGC...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546020.2
3UTR-3UTR GCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCGGTGAGGGGCTGATCTaGATACTATTGCTGAATTTG +
Preference number: 2 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSGEGLI*ILLLNL
Trigger: CAAATTCAGCAATAGTATGCAGATCAGCCCCTCACC...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR CAA 90 bp TCTAGGGCACAGCACCTGCTGTTATCACAGAATTTGAGGACGTTGTaGGGGTTCGAGGATTCCTGGGTGCTCATGATGGACTCAAACAGT +
Preference number: 2 (lower is better)
Translates to: SRAQHLLLSQNLRTL*GFEDSWVLMMDSNS
Trigger: ACTGTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGGTGCTGTGCCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTGATTATCGAGTCCGCTaGGATTTTGGCATTTTGGTC +
Preference number: 2 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGDYRVR*DFGILV
Trigger: GACCAAAATGCCAAAATCTCAGCGGACTCGATAATC...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR-3UTR TCA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATCTGCATACTATTGCTaGATTTGTCTGCACCCGCTA +
Preference number: 2 (lower is better)
Translates to: LRPALRQPETLRNFHKQQSAYYC*ICLHPL
Trigger: TAGCGGGTGCAGACAAATTCAGCAATAGTATGCAGA...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR CCA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCCCCCTGGGGACCCATTaGGATTCAGAGGGTACTGCT +
Preference number: 2 (lower is better)
Translates to: PQATIPYIQCSVALQEKSPLGTH*DSEGTA
Trigger: AGCAGTACCCTCTGAATCCCAATGGGTCCCCAGGGG...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546020.2
3UTR-3UTR CCA 90 bp CAGAGCAGAGGTCCTGCATGGTCACGTCCCATACCTCAAACCCAGCTAAGTGGAGGGCAGATTGTAACCTaGAATATGCAGATTTCCAAA +
Preference number: 2 (lower is better)
Translates to: QSRGPAWSRPIPQTQLSGGQIVT*NMQISK
Trigger: TTTGGAAATCTGCATATTCCAGGTTACAATCTGCCC...TCCACTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCAGGACCTCTGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR TCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAACAGGACCCACTTAGGTaGAAAGCCATGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKQDPLR*KAMGPR
Trigger: CCTGGGCCCCATGGCTTTTCACCTAAGTGGGTCCTG...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR CCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACAGTCCGCTGAGATTTTaGCATTTTGGTCCTTGTCTG +
Preference number: 2 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNSPLRF*HFGPCL
Trigger: CAGACAAGGACCAAAATGCCAAAATCTCAGCGGACT...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR CCA 90 bp CAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATGAGAGAGGGTACTGCTCTGTaGGGTTCCCGTCATCATCAG +
Preference number: 2 (lower is better)
Translates to: QCSVALQEKSRKFQFQMREGTAL*GSRHHQ
Trigger: CTGATGATGACGGGAACCCCACAGAGCAGTACCCTC...TCTCATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546020.2
3UTR-3UTR CCA 90 bp CAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATGAGAGGTCAGAGTATCAAATaGAGGGGGTCGCCATGCCCA +
Preference number: 2 (lower is better)
Translates to: QCSVALQEKSRKFQFQMRGQSIK*RGSPCP
Trigger: TGGGCATGGCGACCCCCTCCATTTGATACTCTGACC...TCTCATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546020.2
3UTR-3UTR CCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGCATTGATAAAGAGCTaGAGCCAGGGGGAGGTGGTC +
Preference number: 2 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKALIKS*SQGEVV
Trigger: GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGC...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546020.2
3UTR-3UTR TCA 90 bp CATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATAGAACAATGAGGTGGTaGGGGGCTGATCTGCATACT +
Preference number: 2 (lower is better)
Translates to: HSVQCSTSREIQKVSVPDRTMRW*GADLHT
Trigger: AGTATGCAGATCAGCCCCTCACCACCTCATTGTTCT...ATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR CCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCAGTCCGCTGAGATTTTaGCATTTTGGTCCTTGTCTG +
Preference number: 2 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFSPLRF*HFGPCL
Trigger: CAGACAAGGACCAAAATGCCAAAATCTCAGCGGACT...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR GCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGGGTGAGGGGCTGATCTaGATACTATTGCTGAATTTG +
Preference number: 2 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQGEGLI*ILLLNL
Trigger: CAAATTCAGCAATAGTATGCAGATCAGCCCCTCACC...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR CAA 90 bp CACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTaGGCATTTTGGTCCTTGTCTGTCCAAGATATTTTTGGAAATAAT +
Preference number: 2 (lower is better)
Translates to: HRRNISRQIIESAEI*AFWSLSVQDIFGNN
Trigger: ATTATTTCCAAAAATATCTTGGACAGACAAGGACCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR GCA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCATTCCTTACATTCAGTaGAGTGTAGCACTTCAAGAG +
Preference number: 2 (lower is better)
Translates to: PQATIPYIQCSVALQEKSIPYIQ*SVALQE
Trigger: CTCTTGAAGTGCTACACTGCACTGAATGTAAGGAAT...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR CCA 72 bp GTGCCAGCCACCACGTGGGCCCCGCGGCCTGTGCACTaGACATCTCGAATCCGGCCCCCTGTGCCAGTGGTT +
Preference number: 3 (lower is better)
Translates to: VPATTWAPRPVH*TSRIRPPVPVV
Trigger: AACCACTGGCACAGGGGGCCGGATTCGAGATGTCCAGTGCACAGGCCGCGGGGCCCACGTGGTGGCTGGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp GGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTaGAGGCCCAAGGAGCGGGCGAAGCCAGCCAGCACT +
Preference number: 3 (lower is better)
Translates to: GLIHSRRWPSGS*RPKERAKPAST
Trigger: AGTGCTGGCTGGCTTCGCCCGCTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp CATGATGGGCTTGATCCACTCACGCCGCTGGCCGTCTaGGAGCTGGAGGCCCAAGGAGCGGGCGAAGCCAGC +
Preference number: 3 (lower is better)
Translates to: HDGLDPLTPLAV*ELEAQGAGEAS
Trigger: GCTGGCTTCGCCCGCTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp GGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTaGCTCCTCAGCGAACAGCACAGACAGGACTGGGAG +
Preference number: 3 (lower is better)
Translates to: GQVWLLHLQHEA*LLSEQHRQDWE
Trigger: CTCCCAGTCCTGTCTGTGCTGTTCGCTGAGGAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR CCA 72 bp GCCACACAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTaGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: ATQRGSACSRSS*KLVSSQRARSS
Trigger: GGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTGTGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
3UTR CCA 72 bp TCTCCCGGTCTCCATTACTGCCCTCCTCTCGCAAGATaGCGACTCGGGGGCTGGGACCACCAGGCTCACGGG +
Preference number: 3 (lower is better)
Translates to: SPGLHYCPPLAR*RLGGWDHQAHG
Trigger: CCCGTGAGCCTGGTGGTCCCAGCCCCCGAGTCGCCATCTTGCGAGAGGAGGGCAGTAATGGAGACCGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp GCTGGGAGTCAGGGCCCATCTCTGCAGCATCCTCATTaGGGTCGCCTCCCACCCAGCCGAGCAGAGCCAGCA +
Preference number: 3 (lower is better)
Translates to: AGSQGPSLQHPH*GRLPPSRAEPA
Trigger: TGCTGGCTCTGCTCGGCTGGGTGGGAGGCGACCCCAATGAGGATGCTGCAGAGATGGGCCCTGACTCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 72 bp CCCGCACGGTCTCAGTGCCAACCCGAGCAGCCATGCTaGGGGAGTCCTTGCCACCATCCACTGCCACACCCA +
Preference number: 3 (lower is better)
Translates to: PARSQCQPEQPC*GSPCHHPLPHP
Trigger: TGGGTGTGGCAGTGGATGGTGGCAAGGACTCCCTCAGCATGGCTGCTCGGGTTGGCACTGAGACCGTGCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp CTCAGTGCCACAACCGCTACATCTGCCAGAGGAGTTTaGAGGGGCCCCACGCACTGCTGCTGGGCCACCAGG +
Preference number: 3 (lower is better)
Translates to: LSATTATSARGV*RGPTHCCWATR
Trigger: CCTGGTGGCCCAGCAGCAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGATGTAGCGGTTGTGGCACTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp CCACTAAACATGATGGGCTTGATCCACTCACGCCGCTaGCCGTCTGGGAGCTGGAGGCCCAAGGAGCGGGCG +
Preference number: 3 (lower is better)
Translates to: PLNMMGLIHSRR*PSGSWRPKERA
Trigger: CGCCCGCTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 72 bp GGGTCGCCTCCCACCCAGCCGAGCAGAGCCAGCAGTTaGCAGCCATTACACACGCCCAGGCTGAAGGTGTCT +
Preference number: 3 (lower is better)
Translates to: GSPPTQPSRASS*QPLHTPRLKVS
Trigger: AGACACCTTCAGCCTGGGCGTGTGTAATGGCTGTCAACTGCTGGCTCTGCTCGGCTGGGTGGGAGGCGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp GGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATaGCCACTGCCAAGGCCTAACGGCCCGCTCAGGGTG +
Preference number: 3 (lower is better)
Translates to: GGGQSIKWRGSP*PLPRPNGPLRV
Trigger: CACCCTGAGCGGGCCGTTAGGCCTTGGCAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR GCA 72 bp ATCCGCCAAAGCTGCGCCCTCCCCTGGGAGCTTGGCTaGCCACATCCAGTTCCCGCTACACTTCACATCCCG +
Preference number: 3 (lower is better)
Translates to: IRQSCALPWELG*PHPVPATLHIP
Trigger: CGGGATGTGAAGTGTAGCGGGAACTGGATGTGGGCAGCCAAGCTCCCAGGGGAGGGCGCAGCTTTGGCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp GGAGTCCTTGCCACCATCCACTGCCACACCCAGGGCTaGCATCACTGCCACCATAGCCTCACAGGCATCCGC +
Preference number: 3 (lower is better)
Translates to: GVLATIHCHTQG*HHCHHSLTGIR
Trigger: GCGGATGCCTGTGAGGCTATGGTGGCAGTGATGGCAGCCCTGGGTGTGGCAGTGGATGGTGGCAAGGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp AGTGGAAGGCATCGGCCATCTCCCGGTCTCCATTACTaGCCTCCTCTCGCAAGATGGCGACTCGGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: SGRHRPSPGLHY*PPLARWRLGGW
Trigger: CCAGCCCCCGAGTCGCCATCTTGCGAGAGGAGGGCAGTAATGGAGACCGGGAGATGGCCGATGCCTTCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp GGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTaGCTCCTCAGCGAACAGCACAGACAGGACATCAAC +
Preference number: 3 (lower is better)
Translates to: GQVWLLHLQHEA*LLSEQHRQDIN
Trigger: GTTGATGTCCTGTCTGTGCTGTTCGCTGAGGAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp TTGACAGCCATTACACACGCCCAGGCTGAAGGTGTCTaGCCGCTTCCGGAAGCGCCTCAGCTCAGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: LTAITHAQAEGV*PLPEAPQLSPS
Trigger: GCTGGGGCTGAGCTGAGGCGCTTCCGGAAGCGGCCAGACACCTTCAGCCTGGGCGTGTGTAATGGCTGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp AGGTTGTGGCGTAGCAGAAGGCCTGGCCGGGCTGGCTaGGAGTCAGGGCCCATCTCTGCAGCATCCTCATTG +
Preference number: 3 (lower is better)
Translates to: RLWRSRRPGRAG*ESGPISAASSL
Trigger: CAATGAGGATGCTGCAGAGATGGGCCCTGACTCCCAGCCAGCCCGGCCAGGCCTTCTGCTACGCCACAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp GTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAAACGTGGAGCTGGCCCTaGAAGAACCAGTGTCGGCTG +
Preference number: 3 (lower is better)
Translates to: VAGPAGNSSPPRGLAAPQTWSWP*KNQCRL
Trigger: CAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACGT...TTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 72 bp GAGCCAGCAGTTGACAGCCATTACACACGCCCAGGCTaGAGGTGTCTGGCCGCTTCCGGAAGCGCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: EPAVDSHYTRPG*RCLAASGSASA
Trigger: AGCTGAGGCGCTTCCGGAAGCGGCCAGACACCTTCAGCCTGGGCGTGTGTAATGGCTGTCAACTGCTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp GAGCTCCTCATGGCTCAGTGCCACAACCGCTACATCTaGCAGAGGAGTTTGCAGGGGCCCCACGCACTGCTG +
Preference number: 3 (lower is better)
Translates to: ELLMAQCHNRYI*QRSLQGPHALL
Trigger: CAGCAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGATGTAGCGGTTGTGGCACTGAGCCATGAGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp GAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATaGAGGGGGTCGCCATGCCCACTGCCAAGGCCTAAC +
Preference number: 3 (lower is better)
Translates to: ELEPGGGGQSIK*RGSPCPLPRPN
Trigger: GTTAGGCCTTGGCAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR-3UTR CAA 90 bp GGACATCAACCCTGGGGACAGGCACATCCACCTGTAGCCCGCAATTTCCAGCAAGTTGCTGGAAGCGGCTaGGCCGTGTGGGGTCCTCAG +
Preference number: 3 (lower is better)
Translates to: GHQPWGQAHPPVARNFQQVAGSG*AVWGPQ
Trigger: CTGAGGACCCCACACGGCCAAGCCGCTTCCAGCAAC...TTGCTGGAAATTGCGGGCTACAGGTGGATGTGCCTGTCCCCAGGGTTGATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp CAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGAACATGTCTCAGCCCTaGCTGTTGCTGGAAGCGGCT +
Preference number: 3 (lower is better)
Translates to: QRGSACSRSSWKLVSSQRNMSQP*LLLEAA
Trigger: AGCCGCTTCCAGCAACAGCAAGGGCTGAGACATGTT...CCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 72 bp ACGAAGCAAGCCGGGCAACGTTCACGGGCACTGACATaGGTCAGGAAGTCCCGGTTGGGGGACCTCAGCAGA +
Preference number: 3 (lower is better)
Translates to: TKQAGQRSRALT*VRKSRLGDLSR
Trigger: TCTGCTGAGGTCCCCCAACCGGGACTTCCTGACTCATGTCAGTGCCCGTGAACGTTGCCCGGCTTGCTTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 72 bp CCCGATCGTCCACCAGCACTATTCTCCGGTCTCCAGTaGTGGTGCCCACGAAGCAAGCCGGGCAACGTTCAC +
Preference number: 3 (lower is better)
Translates to: PDRPPALFSGLQ*WCPRSKPGNVH
Trigger: GTGAACGTTGCCCGGCTTGCTTCGTGGGCACCATCACTGGAGACCGGAGAATAGTGCTGGTGGACGATCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 72 bp TGGCCTGAGCAGAGGAGGCGGTCTTTCAGCAGCCCCTaGGTGATGCTGAAGGCCCGCACCAAGTTCTCAGGA +
Preference number: 3 (lower is better)
Translates to: WPEQRRRSFSSP*VMLKARTKFSG
Trigger: TCCTGAGAACTTGGTGCGGGCCTTCAGCATCACTCAGGGGCTGCTGAAAGACCGCCTCCTCTGCTCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp CGCTATTGGACTGCGCCAAGTCAAAGGCCTCCACAGTaGTCGGGTTCCGCTGTAGCTCCTGGAAGCGCTTGG +
Preference number: 3 (lower is better)
Translates to: RYWTAPSQRPPQ*SGSAVAPGSAW
Trigger: CCAAGCGCTTCCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTGACTTGGCGCAGTCCAATAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp CTGGAATATGCAGATTTCCAAAGCAATAGCCGGCAGTaGCAGCCACCACGTGGGCCCCGCGGCCTGTGCACT +
Preference number: 3 (lower is better)
Translates to: LEYADFQSNSRQ*QPPRGPRGLCT
Trigger: AGTGCACAGGCCGCGGGGCCCACGTGGTGGCTGGCACTGCCGGCTATTGCTTTGGAAATCTGCATATTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp GCTTCCTCTGCAGGAAGAACTCCTTCCGAGGCATCTTaGCCAGCACCCATTCGAGCTCCAGGTCCACAGGGG +
Preference number: 3 (lower is better)
Translates to: ASSAGRTPSEAS*PAPIRAPGPQG
Trigger: CCCCTGTGGACCTGGAGCTCGAATGGGTGCTGGGCAAGATGCCTCGGAAGGAGTTCTTCCTGCAGAGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp GAGGCCTGGCTCCTCAGCGAACAGCACAGACAGGACTaGGAGAGCAATGTGGGGAGTCAGGGGGATGCAAGA +
Preference number: 3 (lower is better)
Translates to: EAWLLSEQHRQD*ESNVGSQGDAR
Trigger: TCTTGCATCCCCCTGACTCCCCACATTGCTCTCCCAGTCCTGTCTGTGCTGTTCGCTGAGGAGCCAGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR CCA 72 bp TCAGCCCTTGCTGTTGCTGGAAGCGGCTTGGCCGTGTaGGGTCCTCAGGCCGTAGGAATCGGACTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: SALAVAGSGLAV*GPQAVGIGLPF
Trigger: GAAAGGAAGTCCGATTCCTACGGCCTGAGGACCCCACACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp GCTGTGAAGACAACATGTCTCAGCCCTTGCTGTTGCTaGAAGCGGCTTGGCCGTGTGGGGTCCTCAGGCCGT +
Preference number: 3 (lower is better)
Translates to: AVKTTCLSPCCC*KRLGRVGSSGR
Trigger: ACGGCCTGAGGACCCCACACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGAGACATGTTGTCTTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp TCTGCTGTGAAGACAACATGTCTCAGCCCTTGCTGTTaGTGGAAGCGGCTTGGCCGTGTGGGGTCCTCAGGC +
Preference number: 3 (lower is better)
Translates to: SAVKTTCLSPCC*WKRLGRVGSSG
Trigger: GCCTGAGGACCCCACACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGAGACATGTTGTCTTCACAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp CATTGCCATTGCCACCAGCGCCCTGATCATGAAGGCTaGAGATGGGGTTTCCCTTGGGGGCCTCCACACAAG +
Preference number: 3 (lower is better)
Translates to: HCHCHQRPDHEG*RWGFPWGPPHK
Trigger: CTTGTGTGGAGGCCCCCAAGGGAAACCCCATCTGCAGCCTTCATGATCAGGGCGCTGGTGGCAATGGCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp GGCTGTGGCAGCCCCTATGAGCTCCTCATGGCTCAGTaGCACAACCGCTACATCTGCCAGAGGAGTTTGCAG +
Preference number: 3 (lower is better)
Translates to: GCGSPYELLMAQ*HNRYICQRSLQ
Trigger: CTGCAAACTCCTCTGGCAGATGTAGCGGTTGTGGCACTGAGCCATGAGGAGCTCATAGGGGCTGCCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp TCAGCGAACAGCACAGACAGGACTGGGAGAGCAATGTaGGGAGTCAGGGGGATGCAAGAAGGGCCAAGGGAG +
Preference number: 3 (lower is better)
Translates to: SANSTDRTGRAM*GVRGMQEGPRE
Trigger: CTCCCTTGGCCCTTCTTGCATCCCCCTGACTCCCCACATTGCTCTCCCAGTCCTGTCTGTGCTGTTCGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR CCA 72 bp AGTGAGTGCACCAGCTTCTGCCCATCCACGTGGAGCTaGCCCTTGAAGAACCAGTGTCGGCTGTGCTCGCTA +
Preference number: 3 (lower is better)
Translates to: SECTSFCPSTWS*PLKNQCRLCSL
Trigger: TAGCGAGCACAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAAGCTGGTGCACTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp GCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAAATTTGAGGACGTTGTaGGGGTTCGAGGATTCCTGG +
Preference number: 3 (lower is better)
Translates to: ALPVAGPAGNSSPPRGLANLRTL*GFEDSW
Trigger: CCAGGAATCCTCGAACCCCAACAACGTCCTCAAATT...TGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp CTGTTCCATCTCCGGGTCTCCTCGCTGCACAGCCCCAAAGTCCAGGTCACTGGTCTAAACATGATGGGCTaGATCCACTCACGCCGCTGG +
Preference number: 3 (lower is better)
Translates to: LFHLRVSSLHSPKVQVTGLNMMG*IHSRRW
Trigger: CCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAG...ACCAGTGACCTGGACTTTGGGGCTGTGCAGCGAGGAGACCCGGAGATGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp GGACATCAACCCTGGGGACAGGCACATCCACCTGTAGCCCGCAATTTCCAGCAAGGCTCTGGGGCCTCCTaGCTTATGTGGTCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: GHQPWGQAHPPVARNFQQGSGAS*LMWSAS
Trigger: GGAAGCTGACCACATAAGCAAGGAGGCCCCAGAGCC...TTGCTGGAAATTGCGGGCTACAGGTGGATGTGCCTGTCCCCAGGGTTGATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTATCTGCCAGAGGAGTTaGCAGGGGCCCCACGCACTG +
Preference number: 3 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGICQRS*QGPHAL
Trigger: CAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGAT...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp GATTCCTGGGTGCTCATGATGGACTCAAACAGTGAGTaGACCAGCTTCTGCCCATCCACGTGGAGCTGGCCC +
Preference number: 3 (lower is better)
Translates to: DSWVLMMDSNSE*TSFCPSTWSWP
Trigger: GGGCCAGCTCCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATCATGAGCACCCAGGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp TCAAACAGTGAGTGCACCAGCTTCTGCCCATCCACGTaGAGCTGGCCCTTGAAGAACCAGTGTCGGCTGTGC +
Preference number: 3 (lower is better)
Translates to: SNSECTSFCPST*SWPLKNQCRLC
Trigger: GCACAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp GGTCTCCTCGCTGCACAGCCCCAAAGTCCAGGTCACTaGTGTTATCTCCCTGCACCTGCACAGATGAAGCAG +
Preference number: 3 (lower is better)
Translates to: GLLAAQPQSPGH*CYLPAPAQMKQ
Trigger: CTGCTTCATCTGTGCAGGTGCAGGGAGATAACACCAGTGACCTGGACTTTGGGGCTGTGCAGCGAGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp GAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGGAGTCCGCTGAGATTTaGGCATTTTGGTCCTTGTCT +
Preference number: 3 (lower is better)
Translates to: EPGGGGQSIKWRGSPCPLESAEI*AFWSLS
Trigger: AGACAAGGACCAAAATGCCAAAATCTCAGCGGACTC...CAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR-3UTR CAA 90 bp CAGCTCCAGGCAATGGAGGCCAGCATCCCGGTAACGCTTCAGCACCTGGGCCAGCTGTTATCACAGAATTaGAGGACGTTGTTGGGGTTC +
Preference number: 3 (lower is better)
Translates to: QLQAMEASIPVTLQHLGQLLSQN*RTLLGF
Trigger: GAACCCCAACAACGTCCTCAAATTCTGTGATAACAG...CTGGCCCAGGTGCTGAAGCGTTACCGGGATGCTGGCCTCCATTGCCTGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp ATGAAGGCTGCAGATGGGGTTTCCCTTGGGGGCCTCCACACAAGCCCTGATCACTACCCGTCATGGACCTaGCTTCCTTTCTGGGACCTA +
Preference number: 3 (lower is better)
Translates to: MKAADGVSLGGLHTSPDHYPSWT*LPFWDL
Trigger: TAGGTCCCAGAAAGGAAGCAAGGTCCATGACGGGTA...GTGATCAGGGCTTGTGTGGAGGCCCCCAAGGGAAACCCCATCTGCAGCCTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 72 bp CGAGGATTCCTGGGTGCTCATGATGGACTCAAACAGTaGGTGCACCAGCTTCTGCCCATCCACGTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: RGFLGAHDGLKQ*VHQLLPIHVEL
Trigger: CAGCTCCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATCATGAGCACCCAGGAATCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 72 bp AGATGGGGTTTCCCTTGGGGGCCTCCACACAAGCCCTaGTCACACGGTTCATCTTCTGTTCCATCTCCGGGT +
Preference number: 3 (lower is better)
Translates to: RWGFPWGPPHKP*SHGSSSVPSPG
Trigger: ACCCGGAGATGGAACAGAAGATGAACCGTGTGATCAGGGCTTGTGTGGAGGCCCCCAAGGGAAACCCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR TCA 72 bp GGGTTGGGTCCCCAAGCTGGAAGCGGCTGGTGTAAATaGTGGCTCCAGCTGGGTCACTCAGCTCTTTTAGGA +
Preference number: 3 (lower is better)
Translates to: GLGPQAGSGWCK*WLQLGHSALLG
Trigger: TCCTAAAAGAGCTGAGTGACCCAGCTGGAGCCATCATTTACACCAGCCGCTTCCAGCTTGGGGACCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp GGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTaGACACCGGTGATCACTGGGTGTTGTGAAGTGGGC +
Preference number: 3 (lower is better)
Translates to: GAQNIPQSQGGN*TPVITGCCEVG
Trigger: GCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR GCA 72 bp CTGGACATCTCGAATCCGGCCCCCTGTGCCAGTGGTTaGACCACTAAAGGGGCATACTCCTGTGGGAAAGTT +
Preference number: 3 (lower is better)
Translates to: LDISNPAPCASG*TTKGAYSCGKV
Trigger: AACTTTCCCACAGGAGTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGGGGCCGGATTCGAGATGTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp GGGTCCTCAGGCCGTAGGAATCGGACTTCCTTTCCCTaGATTGCACTGTGGACATACCCGTCATGGACCTTG +
Preference number: 3 (lower is better)
Translates to: GSSGRRNRTSFP*IALWTYPSWTL
Trigger: CAAGGTCCATGACGGGTATGTCCACAGTGCAATCCAGGGAAAGGAAGTCCGATTCCTACGGCCTGAGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp TGTCCAGCCCAATTGCCCCAGAGCAGAGGTCCTGCATaGTCACGTCCCATACCTCAAACCCAGCTAAGTGGA +
Preference number: 3 (lower is better)
Translates to: CPAQLPQSRGPA*SRPIPQTQLSG
Trigger: TCCACTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCAGGACCTCTGCTCTGGGGCAATTGGGCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAAGCCGAGATCACGCCATaGTACTCCAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: VLRPALRQPETLRNFHKQAEITP*YSSLGD
Trigger: GTCACCCAGGCTGGAGTACAATGGCGTGATCTCGGC...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR TCA 72 bp ACATCCCTCAGAGCCAAGGAGGCAATTGCACACCGGTaGTCACTGGGTGTTGTGAAGTGGGCAACAGAAGCC +
Preference number: 3 (lower is better)
Translates to: TSLRAKEAIAHR*SLGVVKWATEA
Trigger: GGCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR GCA 72 bp CGGTTCATCTTCTGTTCCATCTCCGGGTCTCCTCGCTaGACAGCCCCAAAGTCCAGGTCACTGGTGTTATCT +
Preference number: 3 (lower is better)
Translates to: RFIFCSISGSPR*TAPKSRSLVLS
Trigger: AGATAACACCAGTGACCTGGACTTTGGGGCTGTGCAGCGAGGAGACCCGGAGATGGAACAGAAGATGAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp AAAGTGTCCAGCCCAATTGCCCCAGAGCAGAGGTCCTaGATGGTCACGTCCCATACCTCAAACCCAGCTAAG +
Preference number: 3 (lower is better)
Translates to: KVSSPIAPEQRS*MVTSHTSNPAK
Trigger: CTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCAGGACCTCTGCTCTGGGGCAATTGGGCTGGACACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CCA 72 bp TGCATGGTCACGTCCCATACCTCAAACCCAGCTAAGTaGAAGGCATCGGCCATCTCCCGGTCTCCATTACTG +
Preference number: 3 (lower is better)
Translates to: CMVTSHTSNPAK*KASAISRSPLL
Trigger: CAGTAATGGAGACCGGGAGATGGCCGATGCCTTCCACTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp CCTGGATTGCACTGTGGACATACCCGTCATGGACCTTaGTTCCTTTCTGGGACCTACACTAACCCAACCAGG +
Preference number: 3 (lower is better)
Translates to: PGLHCGHTRHGP*FLSGTYTNPTR
Trigger: CCTGGTTGGGTTAGTGTAGGTCCCAGAAAGGAAGCAAGGTCCATGACGGGTATGTCCACAGTGCAATCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR GCA 72 bp GGGCGAAGCCAGCCAGCACTGGTTCCCCAAACTTGTTaGCATAGTCAGAAGCTCCATTACTGGCTTCAATGG +
Preference number: 3 (lower is better)
Translates to: GRSQPALVPQTC*HSQKLHYWLQW
Trigger: CCATTGAAGCCAGTAATGGAGCTTCTGACTATGGCAACAAGTTTGGGGAACCAGTGCTGGCTGGCTTCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACGAGTCCGCTGAGATTTaGGCATTTTGGTCCTTGTCT +
Preference number: 3 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNESAEI*AFWSLS
Trigger: AGACAAGGACCAAAATGCCAAAATCTCAGCGGACTC...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR TCA 72 bp AGTCTAGGGCACAGCACCTGCTGTTATCACAGAATTTaGGGACGTTGTTGGGGTTCGAGGATTCCTGGGTGC +
Preference number: 3 (lower is better)
Translates to: SLGHSTCCYHRI*GRCWGSRIPGC
Trigger: GCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGGTGCTGTGCCCTAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCATACTATTGCTGAATTaGTCTGCACCCGCTAACCCC +
Preference number: 3 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSILLLN*SAPANP
Trigger: GGGGTTAGCGGGTGCAGACAAATTCAGCAATAGTAT...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR CCA 72 bp AGGACTGAGGATGTTTCATCATGGACATCTCAGGGATaGGAAGTCTCAGAGGGGTGCAGTCAGGAACATGGT +
Preference number: 3 (lower is better)
Translates to: RTEDVSSWTSQG*EVSEGCSQEHG
Trigger: ACCATGTTCCTGACTGCACCCCTCTGAGACTTCCCATCCCTGAGATGTCCATGATGAAACATCCTCAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR CCA 72 bp CAGAATTTGAGGACGTTGTTGGGGTTCGAGGATTCCTaGGTGCTCATGATGGACTCAAACAGTGAGTGCACC +
Preference number: 3 (lower is better)
Translates to: QNLRTLLGFEDS*VLMMDSNSECT
Trigger: GGTGCACTCACTGTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR-3UTR CAA 90 bp AGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCTTGGCATTTTGGTCCTaGTCTGTCCAAGATATTTTT +
Preference number: 3 (lower is better)
Translates to: SQQLPSRVQFRALIKSWSLAFWS*SVQDIF
Trigger: AAAAATATCTTGGACAGACAAGGACCAAAATGCCAA...GCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR TCA 72 bp CAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTaGGATTTTGGCATTTTGGTCCTTGTCTGTCCAAGA +
Preference number: 3 (lower is better)
Translates to: QKEHQQADYRVR*DFGILVLVCPR
Trigger: TCTTGGACAGACAAGGACCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR CAA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGGAGTCCGCTGAGATTTaGGCATTTTGGTCCTTGTCT +
Preference number: 3 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQESAEI*AFWSLS
Trigger: AGACAAGGACCAAAATGCCAAAATCTCAGCGGACTC...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR-3UTR CAA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGCTGATCTGCATACTATaGCTGAATTTGTCTGCACCC +
Preference number: 3 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQLICIL*LNLSAP
Trigger: GGGTGCAGACAAATTCAGCAATAGTATGCAGATCAG...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR GCA 72 bp GAGAAACTTCCACAAGCAACAATTCCTTACATTCAGTaGAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTT +
Preference number: 3 (lower is better)
Translates to: EKLPQATIPYIQ*SVALQEKSRKF
Trigger: AAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR TCA 72 bp TCAGATACATACCAAATGCCTCACACATGCGTGGCTTaGGCTAAGTGTTATACACAGCTATTATTTTTAATT +
Preference number: 3 (lower is better)
Translates to: SDTYQMPHTCVA*AKCYTQLLFLI
Trigger: AATTAAAAATAATAGCTGTGTATAACACTTAGCTCAAGCCACGCATGTGTGAGGCATTTGGTATGTATCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR CCA 72 bp TTAATTCAGATACATACCAAATGCCTCACACATGCGTaGCTTGAGCTAAGTGTTATACACAGCTATTATTTT +
Preference number: 3 (lower is better)
Translates to: LIQIHTKCLTHA*LELSVIHSYYF
Trigger: AAAATAATAGCTGTGTATAACACTTAGCTCAAGCCACGCATGTGTGAGGCATTTGGTATGTATCTGAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTTCAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTGGCTCTGGCGACTCGGGGGCTaGGACCACCAGGCTCACGGG +
Preference number: 4 (lower is better)
Translates to: LQHLGQVWLLHLQHEAWLWRLGG*DHQAHG
Trigger: CCCGTGAGCCTGGTGGTCCCAGCCCCCGAGTCGCCA...GAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTGAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp GCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGGCCCCACGCACTGCTaGTGGGCCACCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ALPVAGPAGNSSPPRGLAGPTHC*WATRPP
Trigger: GGGAGGCCTGGTGGCCCAGCAGCAGTGCGTGGGGCC...TGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGACACCCACCCGGACCATGGCGTaGGGCCCGGCCTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LAAPQQAPPEPQPRSLTPTRTMA*GPASPV
Trigger: CACAGGCGAGGCCGGGCCCCACGCCATGGTCCGGGT...GGGTGTCAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
CDS-3UTR CCA 90 bp GCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCACTGACACCCGGACCATaGCGTGGGGCCCGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: ALPVAGPAGNSSPPRGLALTPGP*RGARPR
Trigger: GCGAGGCCGGGCCCCACGCCATGGTCCGGGTGTCAG...TGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
CDS-3UTR GCA 90 bp TCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCGGTCGCCATGCCCACTaGCAAGGCCTAACGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SQRARSSPTGSSRTTAPFGRHAH*QGLTAR
Trigger: GCGGGCCGTTAGGCCTTGGCAGTGGGCATGGCGACC...GAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAATGGCCGTCTGGGAGCTaGAGGCCCAAGGAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: VAGPAGNSSPPRGLAAPQWPSGS*RPKERA
Trigger: CGCCCGCTCCTTGGGCCTCCAGCTCCCAGACGGCCA...TTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CTTCAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTGGCTCACCCTCTCCAGAGCCTaGTGCACGCTCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQHLGQVWLLHLQHEAWLTLSRA*CTLSPG
Trigger: CCCAGGGCTGAGCGTGCACCAGGCTCTGGAGAGGGT...GAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp ATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGGAGGCCCAAGGAGAAGGCCTGGCCGGGCTaGCTGGGAGTCAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: MGLIHSRRWPSGSWRPKEKAWPG*LGVRAH
Trigger: ATGGGCCCTGACTCCCAGCCAGCCCGGCCAGGCCTT...CTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp AGCGAGACTCGTAGCGCCCAGACAGGTTGTGGCGTAGCAGAAGGCCTGGCCGGGGCCCCACACGCACGCTaGCCCAGCGAGACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: SETRSAQTGCGVAEGLAGAPHAR*PSETRS
Trigger: GCTACGAGTCTCGCTGGGCCAGCGTGCGTGTGGGGC...CCCGGCCAGGCCTTCTGCTACGCCACAACCTGTCTGGGCGCTACGAGTCTCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CAA 72 bp ACATCCCGGAGGTCAGTGACCAGAGCAAACACCAGGTaGGTGAGGGCTTCGGCCACGGCCAGCCGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TSRRSVTRANTR*VRASATASRAA
Trigger: CGCCGCCCGGCTGGCCGTGGCCGAAGCCCTCACCAACCTGGTGTTTGCTCTGGTCACTGACCTCCGGGATGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CAA 72 bp GGCTGGGAGTCAGGGCCCATCTCTGCAGCATCCTCATaGGGGTCGCCTCCCACCCAGCCGAGCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GWESGPISAASS*GSPPTQPSRAS
Trigger: GCTGGCTCTGCTCGGCTGGGTGGGAGGCGACCCCAATGAGGATGCTGCAGAGATGGGCCCTGACTCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCCACAGCCCCGTTCACTaGCACCCGGACCATGGCGTG +
Preference number: 4 (lower is better)
Translates to: RSSWKLVSSQRARSSPTGHSPVH*HPDHGV
Trigger: CACGCCATGGTCCGGGTGTCAGTGAACGGGGCTGTG...GCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
CDS-3UTR TCA 90 bp GCCGCCCACGAAGGCCACGCCACGGAAAGTGTCCAGCCCAATTGCCCCAGAGCAGCTCAGGGTGAGGCATaGCAGCCAGGTGGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: AAHEGHATESVQPNCPRAAQGEA*QPGGGH
Trigger: ATGGCCGCCACCTGGCTGTCATGCCTCACCCTGAGC...TGCTCTGGGGCAATTGGGCTGGACACTTTCCGTGGCGTGGCCTTCGTGGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp GAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGCCCCTCCCCGGGTCCTaGCGCCAACCCAGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: EPGGGGQSIKWRGSPCPLPLPGS*RQPSLG
Trigger: CCCTAGACTGGGTTGGCGTCAGGACCCGGGGAGGGG...CAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp ATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGGAGGCCCAAGGAGGGCATCCGCCAAAGCTaGGCCCTCCCCTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: MGLIHSRRWPSGSWRPKEGIRQS*ALPWEL
Trigger: AAGCTCCCAGGGGAGGGCGCAGCTTTGGCGGATGCC...CTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CACCTTATTGGTGAGGTAGCGCTTGCTGGCCACGGCGGGCAGCCTCAGAACCCTACTGGGCCAGAGCTGTaGCCCCGAGCCGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: HLIGEVALAGHGGQPQNPTGPEL*PRAGAA
Trigger: GGCAGCACCGGCTCGGGGGCACAGCTCTGGCCCAGT...AGGGTTCTGAGGCTGCCCGCCGTGGCCAGCAAGCGCTACCTCACCAATAAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp AGCGAGACTCGTAGCGCCCAGACAGGTTGTGGCGTAGCAGAAGGCCTGGCCGGGAGCGGCTTGGCCGTGTaGGGTCCTCAGGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: SETRSAQTGCGVAEGLAGSGLAV*GPQAVG
Trigger: TCCTACGGCCTGAGGACCCCACACGGCCAAGCCGCT...CCCGGCCAGGCCTTCTGCTACGCCACAACCTGTCTGGGCGCTACGAGTCTCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp ATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGGAGGCCCAAGGAGCCGCGGCCTGTGCACTaGACATCTCGAATCCGGCCC +
Preference number: 4 (lower is better)
Translates to: MGLIHSRRWPSGSWRPKEPRPVH*TSRIRP
Trigger: GGGCCGGATTCGAGATGTCCAGTGCACAGGCCGCGG...CTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CAAAGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGAAGCGCTTGGTGTGTGCCAGCCACCACGTaGGCCCCGCGGCCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: QRPPQCSGSAVAPGSAWCVPATT*APRPVH
Trigger: GTGCACAGGCCGCGGGGCCCACGTGGTGGCTGGCAC...ACACCAAGCGCTTCCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CCGGCCCCCTGTGCCAGTGGTTGCACCACTAAAGGGGCATACTCCTGTGGGAAAACCCGGACCATGGCGTaGGGCCCGGCCTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PAPCASGCTTKGAYSCGKTRTMA*GPASPV
Trigger: CACAGGCGAGGCCGGGCCCCACGCCATGGTCCGGGT...TTTCCCACAGGAGTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGGGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CCGGCCCCCTGTGCCAGTGGTTGCACCACTAAAGGGGCATACTCCTGTGGGAAACTGACACCCGGACCATaGCGTGGGGCCCGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PAPCASGCTTKGAYSCGKLTPGP*RGARPR
Trigger: GCGAGGCCGGGCCCCACGCCATGGTCCGGGTGTCAG...TTTCCCACAGGAGTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGGGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CCGAGGCATCTTGCCCAGCACCCATTCGAGCTCCAGGTCCACAGGGGTTGGCAGAGTGTGTCCAGGGGCTaGCCCCTCATGGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PRHLAQHPFELQVHRGWQSVSRG*PLMARG
Trigger: CCCTCTGGCCATGAGGGGGCAGCCCCTGGACACACT...CTGCCAACCCCTGTGGACCTGGAGCTCGAATGGGTGCTGGGCAAGATGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp AGCGAGACTCGTAGCGCCCAGACAGGTTGTGGCGTAGCAGAAGGCCTGGCCGGGTCCGGGTCTCCTCGCTaGACAGCCCCAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SETRSAQTGCGVAEGLAGSGSPR*TAPKSR
Trigger: CCTGGACTTTGGGGCTGTGCAGCGAGGAGACCCGGA...CCCGGCCAGGCCTTCTGCTACGCCACAACCTGTCTGGGCGCTACGAGTCTCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGACACCCGCCAGGTCTGGCTCCTaGACCTCCAGCACGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LAAPQQAPPEPQPRSLTPARSGS*TSSTRP
Trigger: AGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGC...GGGTGTCAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
CDS-3UTR CCA 90 bp TTCAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTGGCTCCAGATGGGGTTTCCCTTaGGGGCCTCCACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: FSTWARSGSCTSSTRPGSRWGFP*GPPHKP
Trigger: GGGCTTGTGTGGAGGCCCCCAAGGGAAACCCCATCT...GGAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp TCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCCCAGAGGCTGCAGCATaGGGGGCTTCCTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SQRARSSPTGSSRTTAPFPEAAA*GASSAG
Trigger: TCCTGCAGAGGAAGCCCCCCATGCTGCAGCCTCTGG...GAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCCCGTCACTGACATCGTaGCCTGAGCAGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RSSWKLVSSQRARSSPTGPSLTS*PEQRRR
Trigger: CCGCCTCCTCTGCTCAGGCCACGATGTCAGTGACGG...GCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
CDS-3UTR CCA 90 bp TCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCCTCCAGCACGAGGCCTaGCTCCTCAGCGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: SQRARSSPTGSSRTTAPFLQHEA*LLSEQH
Trigger: GTGCTGTTCGCTGAGGAGCCAGGCCTCGTGCTGGAG...GAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
CDS-3UTR CCA 90 bp AGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGGGGGCAGGCAATAGCTaGGCCCCATCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RGLAAPQQAPPEPQPRSLGAGNS*APSAPS
Trigger: TGAGGGAGCGGATGGGGCCCAGCTATTGCCTGCCCC...CAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
CDS-3UTR CCA 90 bp TCTCCGGTCTCCAGTGATGGTGCCCACGAAGCAAGCCGGGCAACGTTCACGGGCGGGGCAGGCAATAGCTaGGCCCCATCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SPVSSDGAHEASRATFTGGAGNS*APSAPS
Trigger: TGAGGGAGCGGATGGGGCCCAGCTATTGCCTGCCCC...GCCCGTGAACGTTGCCCGGCTTGCTTCGTGGGCACCATCACTGGAGACCGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAAGCCAGCCACGCCCCCTaGGGACCCATTGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: VAGPAGNSSPPRGLAAPQASHAP*GPIGIQ
Trigger: CTGAATCCCAATGGGTCCCCAGGGGGCGTGGCTGGC...TTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CAA 72 bp GCTCAGTGCCACAACCGCTACATCTGCCAGAGGAGTTaGCAGGGGCCCCACGCACTGCTGCTGGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: AQCHNRYICQRS*QGPHALLLGHQ
Trigger: CTGGTGGCCCAGCAGCAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGATGTAGCGGTTGTGGCACTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp GCCGCCCACGAAGGCCACGCCACGGAAAGTGTCCAGCCCAATTGCCCCAGAGCACTGTGGCAGCCCCTATaGGCTCCTCATGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: AAHEGHATESVQPNCPRALWQPL*APHGSV
Trigger: CACTGAGCCATGAGGAGCTCATAGGGGCTGCCACAG...TGCTCTGGGGCAATTGGGCTGGACACTTTCCGTGGCGTGGCCTTCGTGGGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp AGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGTACACACGCCCAGGCTaGAGGTGTCTGGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RGLAAPQQAPPEPQPRSLYTRPG*RCLAAS
Trigger: GGAAGCGGCCAGACACCTTCAGCCTGGGCGTGTGTA...CAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp GCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAAGGGATCAGGGAGGATaGGGGCTAGGACGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: ALPVAGPAGNSSPPRGLARDQGG*GLGRQD
Trigger: GTCCTGCCGTCCTAGCCCTCATCCTCCCTGATCCCT...TGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS-3UTR GCA 90 bp CACAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCCCCGCGGCCTGTaGACTGGACATCTCGAATCC +
Preference number: 4 (lower is better)
Translates to: HSEALPVAGPAGNSSPPRGPRGL*TGHLES
Trigger: GGATTCGAGATGTCCAGTGCACAGGCCGCGGGGCCC...TCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACGTGCCAGCCACCACGTaGGCCCCGCGGCCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNVPATT*APRPVH
Trigger: GTGCACAGGCCGCGGGGCCCACGTGGTGGCTGGCAC...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp AAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCCCTCCTCTCGCAAGATaGCGACTCGGGGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KLVSSQRARSSPTGSSRTPPLAR*RLGGWD
Trigger: GTCCCAGCCCCCGAGTCGCCATCTTGCGAGAGGAGG...GGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGACACCCCAGGCTGAAGGTGTCTaGCCGCTTCCGGAAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LAAPQQAPPEPQPRSLTPQAEGV*PLPEAP
Trigger: AGGCGCTTCCGGAAGCGGCCAGACACCTTCAGCCTG...GGGTGTCAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCAGTGGAGCCCTGGCCGGGCTGGCTaGGAGTCAGGGCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: QRVLLCGVPVIISPVQWSPGRAG*ESGPIS
Trigger: AGAGATGGGCCCTGACTCCCAGCCAGCCCGGCCAGG...GCTCCACTGCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp CCCTGGGGACCCATTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCGCCCCACACGCACGCTaGCCCAGCGAGACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: PWGPIGIQRVLLCGVPVIAPHAR*PSETRS
Trigger: GCTACGAGTCTCGCTGGGCCAGCGTGCGTGTGGGGC...GATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAATGGGTCCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR CAA 72 bp CCACGAAGGCCACGCCACGGAAAGTGTCCAGCCCAATaGCCCCAGAGCAGAGGTCCTGCATGGTCACGTCCC +
Preference number: 4 (lower is better)
Translates to: PRRPRHGKCPAQ*PQSRGPAWSRP
Trigger: GGGACGTGACCATGCAGGACCTCTGCTCTGGGGCAATTGGGCTGGACACTTTCCGTGGCGTGGCCTTCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCGGTCCACCTTATTGGTaGGGTAGCGCTTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSSWKLVSSQRARSSPTGGPPYW*GSACWP
Trigger: TGGCCAGCAAGCGCTACCTCACCAATAAGGTGGACC...GCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCCTTCAGGATGCTTaGGGTCTGGGGTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: RSSWKLVSSQRARSSPTGSLQDA*GLGSQW
Trigger: CCACTGTGACCCCAGACCTCAAGCATCCTGAAGGGA...GCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCAGTGGAGCGCTCAGGGTGAGGCATaGCAGCCAGGTGGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: QRVLLCGVPVIISPVQWSAQGEA*QPGGGH
Trigger: ATGGCCGCCACCTGGCTGTCATGCCTCACCCTGAGC...GCTCCACTGCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR GCA 90 bp TTCAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTGGCTCCGCTCTGGGGCCTCCTTaGTTATGTGGTCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: FSTWARSGSCTSSTRPGSALGPP*LCGQLP
Trigger: TGGAAGCTGACCACATAAGCAAGGAGGCCCCAGAGC...GGAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp TCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCCCCGGTCTCCATTACTaGCCTCCTCTCGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: SQRARSSPTGSSRTTAPFPGLHY*PPLARW
Trigger: CCATCTTGCGAGAGGAGGGCAGTAATGGAGACCGGG...GAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp AGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGTTGTCTCCTCAGCACTaGGGAGGGCCTCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGLAAPQQAPPEPQPRSLLSPQH*GGPQLS
Trigger: GGACAGCTGAGGCCCTCCCCAGTGCTGAGGAGACAA...CAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCATGGAGAAGTTCAGCCTaGGCCCGACCTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALPVAGPAGNSSPPRGLAWRSSA*ARPPAA
Trigger: TGCTGCTGGAGGTCGGGCCCAGGCTGAACTTCTCCA...TGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CCTCATTGGGGTCGCCTCCCACCCAGCCGAGCAGAGCCAGCAGTTGACAGCCATAGCCCTTGCTGTTGCTaGAAGCGGCTTGGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: PHWGRLPPSRAEPAVDSHSPCCC*KRLGRV
Trigger: CACACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCT...ATGGCTGTCAACTGCTGGCTCTGCTCGGCTGGGTGGGAGGCGACCCCAATGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp ATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGGAGGCCCAAGGAGCATTACTGGCTTCAATaGCAACCTCCAGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: MGLIHSRRWPSGSWRPKEHYWLQ*QPPGAG
Trigger: CCCGGCCCCTGGAGGTTGCCATTGAAGCCAGTAATG...CTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGCCGTCACTGACATCGTaGCCTGAGCAGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: EPGGGGQSIKWRGSPCPLPSLTS*PEQRRR
Trigger: CCGCCTCCTCTGCTCAGGCCACGATGTCAGTGACGG...CAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCACCCGGACCATGGCGTaGGGCCCGGCCTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSTRTMA*GPASPV
Trigger: CACAGGCGAGGCCGGGCCCCACGCCATGGTCCGGGT...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTTCAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTGGCTCCCCTGGATTGCACTGTaGACATACCCGTCATGGACC +
Preference number: 4 (lower is better)
Translates to: LQHLGQVWLLHLQHEAWLPWIAL*TYPSWT
Trigger: GGTCCATGACGGGTATGTCCACAGTGCAATCCAGGG...GAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp GACTGCGCCAAGTCAAAGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGTCTTTCAGCAGCCCCTaGGTGATGCTGAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: DCAKSKASTVLGFRCSSWSFSSP*VMLKAR
Trigger: GCGGGCCTTCAGCATCACTCAGGGGCTGCTGAAAGA...CCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTGACTTGGCGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp GCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCACAAAGGCCTCCACAGTaGTCGGGTTCCGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: ALPVAGPAGNSSPPRGLAQRPPQ*SGSAVA
Trigger: AGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTG...TGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGCTCGCTATTGGACTaGGCCAAGTCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PEGSQLPNRLLQNHSPVHCSLLD*AKSKAS
Trigger: GGAGGCCTTTGACTTGGCGCAGTCCAATAGCGAGCA...GTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp AGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGCCTCAGCCCTTGCTGTTaGTGGAAGCGGCTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: SQGEVVRVSNGGGRHAHCLSPCC*WKRLGR
Trigger: ACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGAG...GCAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp GACTGCGCCAAGTCAAAGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGTGCCACACCCAGGGCTaGCATCACTGCCACCATAGC +
Preference number: 4 (lower is better)
Translates to: DCAKSKASTVLGFRCSSWCHTQG*HHCHHS
Trigger: GCTATGGTGGCAGTGATGGCAGCCCTGGGTGTGGCA...CCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTGACTTGGCGCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp ATGAAGGCTGCAGATGGGGTTTCCCTTGGGGGCCTCCACACAAGCCCTGATCACCCCGCACGGTCTCAGTaGCAACCCGAGCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: MKAADGVSLGGLHTSPDHPARSQ*QPEQPC
Trigger: GCATGGCTGCTCGGGTTGGCACTGAGACCGTGCGGG...GTGATCAGGGCTTGTGTGGAGGCCCCCAAGGGAAACCCCATCTGCAGCCTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp TCTCGAATCCGGCCCCCTGTGCCAGTGGTTGCACCACTAAAGGGGCATACTCCTGCCAGGTCTGGCTCCTaGACCTCCAGCACGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SRIRPPVPVVAPLKGHTPARSGS*TSSTRP
Trigger: AGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGC...AGGAGTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGGGGCCGGATTCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp TCTCCGGTCTCCAGTGATGGTGCCCACGAAGCAAGCCGGGCAACGTTCACGGGCAAAGGTCACAGCAGCTaGCCACCCTTTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SPVSSDGAHEASRATFTGKGHSS*PPFGRA
Trigger: GGCTCTGCCAAAGGGTGGGCAGCTGCTGTGACCTTT...GCCCGTGAACGTTGCCCGGCTTGCTTCGTGGGCACCATCACTGGAGACCGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp GTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAATCATCATCAGCCCAGTaGAGTGGAGCCAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VAGPAGNSSPPRGLAAPQSSSAQ*SGAKPL
Trigger: CAGGGGCTTGGCTCCACTGCACTGGGCTGATGATGA...TTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp ATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGGAGGCCCAAGGAGGGATTCAGAGGGTACTaGTCTGTGGGGTTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: MGLIHSRRWPSGSWRPKEGFRGY*SVGFPS
Trigger: TGACGGGAACCCCACAGAGCAGTACCCTCTGAATCC...CTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GAGAGCCCCAACCACCTCTATCAGAAACAGAGCTGCTGGGCCAGCTGTAGTGGCATCCACTCACGCCGCTaGCCGTCTGGGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ESPNHLYQKQSCWASCSGIHSRR*PSGSWR
Trigger: CCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGAT...GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATAGAGGTGGTTGGGGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp ATGAAGGCTGCAGATGGGGTTTCCCTTGGGGGCCTCCACACAAGCCCTGATCACATCCACTCACGCCGCTaGCCGTCTGGGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: MKAADGVSLGGLHTSPDHIHSRR*PSGSWR
Trigger: CCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGAT...GTGATCAGGGCTTGTGTGGAGGCCCCCAAGGGAAACCCCATCTGCAGCCTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp AGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGTCAGGAAGTCCCGGTTaGGGGACCTCAGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RGLAAPQQAPPEPQPRSLSGSPG*GTSAEE
Trigger: CTCTTCTGCTGAGGTCCCCCAACCGGGACTTCCTGA...CAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp TGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCAGTGCACGCTCAGCCCTaGGGGCAAGGCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WDSEGTALWGSRHHQPSAVHAQP*GQGQRL
Trigger: CAGCCTCTGGCCTTGCCCCCAGGGCTGAGCGTGCAC...TGCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp TTCAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTGGCTCCAGGATGCTTGAGGTCTaGGGTCACAGTGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: FSTWARSGSCTSSTRPGSRMLEV*GHSGCD
Trigger: ATCACAGCCACTGTGACCCCAGACCTCAAGCATCCT...GGAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CCCTGGGGACCCATTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCCTCCAGCACGAGGCCTaGCTCCTCAGCGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: PWGPIGIQRVLLCGVPVILQHEA*LLSEQH
Trigger: GTGCTGTTCGCTGAGGAGCCAGGCCTCGTGCTGGAG...GATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAATGGGTCCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp CTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGACACCCTGTAGCCGGTCCAGCTaGAAACTCGTCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LAAPQQAPPEPQPRSLTPCSRSS*KLVSSQ
Trigger: CTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACA...GGGTGTCAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
CDS-3UTR CCA 90 bp CCGAGGCATCTTGCCCAGCACCCATTCGAGCTCCAGGTCCACAGGGGTTGGCAGAGGCTTTGGGAAAGGTaGGGGGCAGGCAATAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRHLAQHPFELQVHRGWQRLWER*GAGNSW
Trigger: CCAGCTATTGCCTGCCCCCCACCTTTCCCAAAGCCT...CTGCCAACCCCTGTGGACCTGGAGCTCGAATGGGTGCTGGGCAAGATGCCTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CCCTGGGGACCCATTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCCGCCCAGACAGGTTGTaGCGTAGCAGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PWGPIGIQRVLLCGVPVIRPDRL*RSRRPG
Trigger: GCCAGGCCTTCTGCTACGCCACAACCTGTCTGGGCG...GATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAATGGGTCCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp TCTCCGGTCTCCAGTGATGGTGCCCACGAAGCAAGCCGGGCAACGTTCACGGGCCCCCTGGGGACCCATTaGGATTCAGAGGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: SPVSSDGAHEASRATFTGPLGTH*DSEGTA
Trigger: AGCAGTACCCTCTGAATCCCAATGGGTCCCCAGGGG...GCCCGTGAACGTTGCCCGGCTTGCTTCGTGGGCACCATCACTGGAGACCGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GCCGCCCACGAAGGCCACGCCACGGAAAGTGTCCAGCCCAATTGCCCCAGAGCAGCATTGATAAAGAGCTaGAGCCAGGGGGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: AAHEGHATESVQPNCPRAALIKS*SQGEVV
Trigger: GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGC...TGCTCTGGGGCAATTGGGCTGGACACTTTCCGTGGCGTGGCCTTCGTGGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CAGAGCAGAGGTCCTGCATGGTCACGTCCCATACCTCAAACCCAGCTAAGTGGAAACCCAACCAGGGCCTaGGGCCTCCCCTCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: QSRGPAWSRPIPQTQLSGNPTRA*GLPSPG
Trigger: ACCCGGGGAGGGGAGGCCCCAGGCCCTGGTTGGGTT...TCCACTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCAGGACCTCTGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CACAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGATTCTCCGGTCTCCAGTaGTGGTGCCCACGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: HSEALPVAGPAGNSSPPRFSGLQ*WCPRSK
Trigger: CTTGCTTCGTGGGCACCATCACTGGAGACCGGAGAA...TCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CTGTTCCATCTCCGGGTCTCCTCGCTGCACAGCCCCAAAGTCCAGGTCACTGGTGGGTCACAGTGGCTGTaGTGTCTGGGCAGACGGCAT +
Preference number: 4 (lower is better)
Translates to: LFHLRVSSLHSPKVQVTGGSQWL*CLGRRH
Trigger: ATGCCGTCTGCCCAGACATCACAGCCACTGTGACCC...ACCAGTGACCTGGACTTTGGGGCTGTGCAGCGAGGAGACCCGGAGATGGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CTCCTCAGCGAACAGCACAGACAGGACTGGGAGAGCAATGTGGGGAGTCAGGGGTCTTTCAGCAGCCCCTaGGTGATGCTGAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LLSEQHRQDWESNVGSQGSFSSP*VMLKAR
Trigger: GCGGGCCTTCAGCATCACTCAGGGGCTGCTGAAAGA...CCCCTGACTCCCCACATTGCTCTCCCAGTCCTGTCTGTGCTGTTCGCTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS-3UTR TCA 90 bp GACTGCGCCAAGTCAAAGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGACTGACATCGTGGCCTaGGCAGAGGAGGCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: DCAKSKASTVLGFRCSSWTDIVA*AEEAVF
Trigger: AAAGACCGCCTCCTCTGCTCAGGCCACGATGTCAGT...CCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTGACTTGGCGCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CATGGACCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGCACAGCCCCGTTCACTaGCACCCGGACCATGGCGTG +
Preference number: 4 (lower is better)
Translates to: HGPNAPTKHDGLDPLTPLHSPVH*HPDHGV
Trigger: CACGCCATGGTCCGGGTGTCAGTGAACGGGGCTGTG...CAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGGTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACAGTGTGTCCAGGGGCTaGCCCCTCATGGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNSVSRG*PLMARG
Trigger: CCCTCTGGCCATGAGGGGGCAGCCCCTGGACACACT...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAAGGCCCCACGCACTGCTaGTGGGCCACCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LRPALRQPETLRNFHKQQGPTHC*WATRPP
Trigger: GGGAGGCCTGGTGGCCCAGCAGCAGTGCGTGGGGCC...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTAGGGGCCCCACGCACTaGTGCTGGGCCACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGRGPTH*CWATRP
Trigger: AGGCCTGGTGGCCCAGCAGCAGTGCGTGGGGCCCCT...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp GGTGAGGGGCTGATCTGCATACTATTGCTGAATTTGTCTGCACCCGCTAACCCCCCCCCGAGCCGGTGCTaGCCAGGGCTCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: GEGLICILLLNLSAPANPPPSRC*PGLRAT
Trigger: TGTGGCTCTGAGCCCTGGGCAGCACCGGCTCGGGGG...GGGGTTAGCGGGTGCAGACAAATTCAGCAATAGTATGCAGATCAGCCCCTCACC
61% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp TCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGCCCCCGAGCCGGTGCTaGCCAGGGCTCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: SGIDKELEPGGGGQSIKWPPSRC*PGLRAT
Trigger: TGTGGCTCTGAGCCCTGGGCAGCACCGGCTCGGGGG...CCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp GAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGCCCGGTCTCCATTACTaGCCTCCTCTCGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: EPGGGGQSIKWRGSPCPLPGLHY*PPLARW
Trigger: CCATCTTGCGAGAGGAGGGCAGTAATGGAGACCGGG...CAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR GCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCGGTCGCCATGCCCACTaGCAAGGCCTAACGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSGRHAH*QGLTAR
Trigger: GCGGGCCGTTAGGCCTTGGCAGTGGGCATGGCGACC...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp AGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGGAAGTCTCAGAGGGGTaGAGTCAGGAACATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGLAAPQQAPPEPQPRSLEVSEG*SQEHGG
Trigger: CCCACCATGTTCCTGACTGCACCCCTCTGAGACTTC...CAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS-3UTR GCA 90 bp ATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGGAGGCCCAAGGAGACCCGTCATGGACCTTaGTTCCTTTCTGGGACCTAC +
Preference number: 4 (lower is better)
Translates to: MGLIHSRRWPSGSWRPKETRHGP*FLSGTY
Trigger: GTAGGTCCCAGAAAGGAAGCAAGGTCCATGACGGGT...CTCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp TTCAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTGGCTCCGATGTTGGTGGATGTTaGGGTGGAGAAGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FSTWARSGSCTSSTRPGSDVGGC*GGEVQP
Trigger: AGGCTGAACTTCTCCACCCCAACATCCACCAACATC...GGAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp AGAAGCTCCATTACTGGCTTCAATGGCAACCTCCAGGGGCCGGGCAAAATTCCCCAGGCCCCAGCCCAGTaGCGCGGCACACTGACACGA +
Preference number: 4 (lower is better)
Translates to: RSSITGFNGNLQGPGKIPQAPAQ*RGTLTR
Trigger: TCGTGTCAGTGTGCCGCGCCACTGGGCTGGGGCCTG...GGGAATTTTGCCCGGCCCCTGGAGGTTGCCATTGAAGCCAGTAATGGAGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CATGGACCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGGCCGGTAGCGCCGGGTaGTCTCCACACGATCCACAG +
Preference number: 4 (lower is better)
Translates to: HGPNAPTKHDGLDPLTPLAGSAG*SPHDPQ
Trigger: CTGTGGATCGTGTGGAGACCACCCGGCGCTACCGGC...CAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGGTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAAGCTCCTGGAAGCGCTTaGTGTAGAAGTCTAGGTCCC +
Preference number: 4 (lower is better)
Translates to: VAGPAGNSSPPRGLAAPQAPGSA*CRSLGP
Trigger: GGGACCTAGACTTCTACACCAAGCGCTTCCAGGAGC...TTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAAGGCTGTGCTCGCTATTaGACTGCGCCAAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: VAGPAGNSSPPRGLAAPQGCARY*TAPSQR
Trigger: CCTTTGACTTGGCGCAGTCCAATAGCGAGCACAGCC...TTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp AGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCACGCCGCTGGCCGTCTaGGAGCTGGAGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SQQLPSRVQFRALIKSWSTPLAV*ELEAQG
Trigger: TCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGT...GCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GCCGCCCACGAAGGCCACGCCACGGAAAGTGTCCAGCCCAATTGCCCCAGAGCAGCCTCCTTGCTTATGTaGTCAGCTTCCATGGACCCA +
Preference number: 4 (lower is better)
Translates to: AAHEGHATESVQPNCPRAASLLM*SASMDP
Trigger: TGGGTCCATGGAAGCTGACCACATAAGCAAGGAGGC...TGCTCTGGGGCAATTGGGCTGGACACTTTCCGTGGCGTGGCCTTCGTGGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGTACAACTTCCATGCCTaGCTCTGGGGCCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: QRGSACSRSSWKLVSSQRYNFHA*LWGLLA
Trigger: AGCAAGGAGGCCCCAGAGCCAGGCATGGAAGTTGTA...CCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp AGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGCAGCAGGCTCTTGACTaGCTGTTCTCCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGLAAPQQAPPEPQPRSLQQALD*LFSQGC
Trigger: ACAGCCTTGGGAGAACAGCCAGTCAAGAGCCTGCTG...CAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp ATGAAGGCTGCAGATGGGGTTTCCCTTGGGGGCCTCCACACAAGCCCTGATCACCCGTCACTGACATCGTaGCCTGAGCAGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: MKAADGVSLGGLHTSPDHPSLTS*PEQRRR
Trigger: CCGCCTCCTCTGCTCAGGCCACGATGTCAGTGACGG...GTGATCAGGGCTTGTGTGGAGGCCCCCAAGGGAAACCCCATCTGCAGCCTTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp TCTCGAATCCGGCCCCCTGTGCCAGTGGTTGCACCACTAAAGGGGCATACTCCTCTCCAGCACGAGGCCTaGCTCCTCAGCGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: SRIRPPVPVVAPLKGHTPLQHEA*LLSEQH
Trigger: GTGCTGTTCGCTGAGGAGCCAGGCCTCGTGCTGGAG...AGGAGTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGGGGCCGGATTCGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CACAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAAGGCTTTGGGAAAGGTaGGGGGCAGGCAATAGCTGG +
Preference number: 4 (lower is better)
Translates to: HSEALPVAGPAGNSSPPRRLWER*GAGNSW
Trigger: CCAGCTATTGCCTGCCCCCCACCTTTCCCAAAGCCT...TCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578979.5
ENST00000580356.5
CDS-3UTR CCA 90 bp CCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTCAAACCCAGCTAAGTaGAAGGCATCGGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: PEGSQLPNRLLQNHSPVHSNPAK*KASAIS
Trigger: GGAGATGGCCGATGCCTTCCACTTAGCTGGGTTTGA...GTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CAAAGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGAAGCGCTTGGTGTCAGCTGCCCACCCTTTaGCAGAGCCCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: QRPPQCSGSAVAPGSAWCQLPTL*QSPGHL
Trigger: CAGATGTCCTGGGCTCTGCCAAAGGGTGGGCAGCTG...ACACCAAGCGCTTCCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp TCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCCAGGCTGAAGGTGTCTaGCCGCTTCCGGAAGCGCCT +
Preference number: 4 (lower is better)
Translates to: SRVQFRALIKSWSQGEVVQAEGV*PLPEAP
Trigger: AGGCGCTTCCGGAAGCGGCCAGACACCTTCAGCCTG...GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp TCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCCTGCAGCATCCTCATTaGGGTCGCCTCCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: SRVQFRALIKSWSQGEVVLQHPH*GRLPPS
Trigger: GCTGGGTGGGAGGCGACCCCAATGAGGATGCTGCAG...GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp CCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTCCAGGTGAGCCCCTGTaGCCAGTCAGCAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PFQGPVSGIDKELEPGGGPGEPL*PVSSSL
Trigger: AAGGGAGCTGCTGACTGGCCACAGGGGCTCACCTGG...ACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR CAA 72 bp TCCATGGACCCAATGCCCCCACTAAACATGATGGGCTaGATCCACTCACGCCGCTGGCCGTCTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SMDPMPPLNMMG*IHSRRWPSGSW
Trigger: CCAGCTCCCAGACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGGTCCATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp TGCGCACTCCACACGGGCAGCACGGCGCCCTCCATCCCTCGCAGCATCAGGGCTCCTTTGCTGGAGAGATaGATTAGGTTCGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: CALHTGSTAPSIPRSIRAPLLER*IRFVED
Trigger: ATCTTCCACGAACCTAATTCATCTCTCCAGCAAAGG...AGCCCTGATGCTGCGAGGGATGGAGGGCGCCGTGCTGCCCGTGTGGAGTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CTGTTCCATCTCCGGGTCTCCTCGCTGCACAGCCCCAAAGTCCAGGTCACTGGTAGTGGCGCGGCACACTaGCACGATGTTGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: LFHLRVSSLHSPKVQVTGSGAAH*HDVGGC
Trigger: ACATCCACCAACATCGTGTCAGTGTGCCGCGCCACT...ACCAGTGACCTGGACTTTGGGGCTGTGCAGCGAGGAGACCCGGAGATGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CACCTTATTGGTGAGGTAGCGCTTGCTGGCCACGGCGGGCAGCCTCAGAACCCTGATGGACTCAAACAGTaGGTGCACCAGCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HLIGEVALAGHGGQPQNPDGLKQ*VHQLLP
Trigger: GGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATC...AGGGTTCTGAGGCTGCCCGCCGTGGCCAGCAAGCGCTACCTCACCAATAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCTGTGAGTCTCTGCTGTaGAGACAACATGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RSSWKLVSSQRARSSPTGCESLL*RQHVSA
Trigger: GGCTGAGACATGTTGTCTTCACAGCAGAGACTCACA...GCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCAGTGGAGCCTGCACCTGCACAGATaGAGCAGCTCCACCTCCAAC +
Preference number: 4 (lower is better)
Translates to: QRVLLCGVPVIISPVQWSLHLHR*SSSTSN
Trigger: GTTGGAGGTGGAGCTGCTTCATCTGTGCAGGTGCAG...GCTCCACTGCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGGCCGTCTCACGGGCACTGACATaGGTCAGGAAGTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: PNAPTKHDGLDPLTPLAVSRALT*VRKSRL
Trigger: CAACCGGGACTTCCTGACTCATGTCAGTGCCCGTGA...GACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp GAGAGCCCCAACCACCTCTATCAGAAACAGAGCTGCTGGGCCAGCTGTAGTGGCGGGTCACAGTGGCTGTaGTGTCTGGGCAGACGGCAT +
Preference number: 4 (lower is better)
Translates to: ESPNHLYQKQSCWASCSGGSQWL*CLGRRH
Trigger: ATGCCGTCTGCCCAGACATCACAGCCACTGTGACCC...GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATAGAGGTGGTTGGGGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp GAGAGCCCCAACCACCTCTATCAGAAACAGAGCTGCTGGGCCAGCTGTAGTGGCGGACATCTGCATAGCTaGAGCCGCCCACGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ESPNHLYQKQSCWASCSGGHLHS*SRPRRP
Trigger: TGGCCTTCGTGGGCGGCTTCAGCTATGCAGATGTCC...GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATAGAGGTGGTTGGGGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTACGGCCCGCTCAGGGTaGGGCATGACAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGTARSG*GMTARW
Trigger: CCACCTGGCTGTCATGCCTCACCCTGAGCGGGCCGT...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR TCA 90 bp AGGGCCAAGGGAGTTGGGGCGGGATCAGGGAAATGCAGGAAGGGCCAGGGTGAGCTAGGACGGCAGGACTaGGGATGTTTCATCATGGAC +
Preference number: 4 (lower is better)
Translates to: RAKGVGAGSGKCRKGQGELGRQD*GCFIMD
Trigger: GTCCATGATGAAACATCCTCAGTCCTGCCGTCCTAG...CTCACCCTGGCCCTTCCTGCATTTCCCTGATCCCGCCCCAACTCCCTTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS-3UTR GCA 90 bp GACTGCGCCAAGTCAAAGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGCCCTGTGCCAGTGGTTaGACCACTAAAGGGGCATAC +
Preference number: 4 (lower is better)
Translates to: DCAKSKASTVLGFRCSSWPCASG*TTKGAY
Trigger: GTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGG...CCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTGACTTGGCGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp AGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGCCCTTTACAACTTCCATaGCTGGCTCTGGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQGEVVRVSNGGGRHAHCPLQLP*LALGPP
Trigger: AGGAGGCCCCAGAGCCAGGCATGGAAGTTGTAAAGG...GCAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGGCCGTCCCTTCCGAGGCATCTTaGCCAGCACCCATTCGAGCT +
Preference number: 4 (lower is better)
Translates to: PNAPTKHDGLDPLTPLAVPSEAS*PAPIRA
Trigger: AGCTCGAATGGGTGCTGGGCAAGATGCCTCGGAAGG...GACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp TCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCCAGGGCTGCCATCACTaGCACCATAGCCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: SRVQFRALIKSWSQGEVVQGCHH*HHSLTG
Trigger: GCCTGTGAGGCTATGGTGGCAGTGATGGCAGCCCTG...GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCAACTGGGCCAGAGCTGTaGCCCCGAGCCGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPTGPEL*PRAGAA
Trigger: GGCAGCACCGGCTCGGGGGCACAGCTCTGGCCCAGT...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp CAGAGCAGAGGTCCTGCATGGTCACGTCCCATACCTCAAACCCAGCTAAGTGGAGCCCCGTTCCTCCTCTaGCACACAGCGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QSRGPAWSRPIPQTQLSGAPFLL*HTARLC
Trigger: GCAGAGCCTCGCTGTGTGGCAGAGGAGGAACGGGGC...TCCACTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCAGGACCTCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CCCTGGGGACCCATTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCTCATCATCAGCCCAGTaGAGTGGAGCCAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PWGPIGIQRVLLCGVPVISSSAQ*SGAKPL
Trigger: CAGGGGCTTGGCTCCACTGCACTGGGCTGATGATGA...GATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAATGGGTCCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR GCA 90 bp AGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCATCACAGGAGCAGATaGCAGCCACGCCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SQQLPSRVQFRALIKSWSHHRSR*QPRPLG
Trigger: CCCCAGGGGGCGTGGCTGGCATCTGCTCCTGTGATG...GCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR GCA 90 bp TCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCTTCCTTTCCCTGGATTaGACTGTGGACATACCCGTC +
Preference number: 4 (lower is better)
Translates to: SQRARSSPTGSSRTTAPFFLSLD*TVDIPV
Trigger: GACGGGTATGTCCACAGTGCAATCCAGGGAAAGGAA...GAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGGCCGTCTGGTGGATGTTGGGGTaGAGAAGTTCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PNAPTKHDGLDPLTPLAVWWMLG*RSSAWA
Trigger: GGCCCAGGCTGAACTTCTCCACCCCAACATCCACCA...GACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCGCCGGTAGCGCCGGGTaGTCTCCACACGATCCACAG +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSAGSAG*SPHDPQ
Trigger: CTGTGGATCGTGTGGAGACCACCCGGCGCTACCGGC...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp GAGAGCCCCAACCACCTCTATCAGAAACAGAGCTGCTGGGCCAGCTGTAGTGGCGCCAGACCAAGCTCCTaGTTGGCCTTCTCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: ESPNHLYQKQSCWASCSGARPSS*LAFSSA
Trigger: TGCGCTGGAGAAGGCCAACCAGGAGCTTGGTCTGGC...GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATAGAGGTGGTTGGGGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp GCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGGGTTCGAGGATTCCTaGGTGCTCATGATGGACTCA +
Preference number: 4 (lower is better)
Translates to: ALPVAGPAGNSSPPRGLAGFEDS*VLMMDS
Trigger: TGAGTCCATCATGAGCACCCAGGAATCCTCGAACCC...TGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCAGCGGCTTGGCCGTGTaGGGTCCTCAGGCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSSGLAV*GPQAVG
Trigger: TCCTACGGCCTGAGGACCCCACACGGCCAAGCCGCT...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCAGGGGCATACTCCTGTaGGAAAGTTGTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RSSWKLVSSQRARSSPTGRGILL*ESCESL
Trigger: CAGAGACTCACAACTTTCCCACAGGAGTATGCCCCT...GCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAATGGCCGTCTGGGAGCTaGAGGCCCAAGGAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: VLRPALRQPETLRNFHKQWPSGS*RPKERA
Trigger: CGCCCGCTCCTTGGGCCTCCAGCTCCCAGACGGCCA...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp AGAAGAAAATGCTACGTAACCTTCCCCGTGCGCACTCCACACGGGCAGCACGGCCAGGGCATTCAGGGTTaGGTCCCCAAGCTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RRKCYVTFPVRTPHGQHGQGIQG*VPKLEA
Trigger: CGCTTCCAGCTTGGGGACCCAACCCTGAATGCCCTG...GCCGTGCTGCCCGTGTGGAGTGCGCACGGGGAAGGTTACGTAGCATTTTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GAGGACGTTGTTGGGGTTCGAGGATTCCTGGGTGCTCATGATGGACTCAAACAGCCCACGCACTGCTGCTaGGCCACCAGGCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: EDVVGVRGFLGAHDGLKQPTHCC*ATRPPT
Trigger: TGTGGGAGGCCTGGTGGCCCAGCAGCAGTGCGTGGG...CTGTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACCTGACACCCGGACCATaGCGTGGGGCCCGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNLTPGP*RGARPR
Trigger: GCGAGGCCGGGCCCCACGCCATGGTCCGGGTGTCAG...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp AGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGCCAAGAGGCTTTGGGAAAGGTaGGGGGCAGGCAATAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGRWSEYQMEGVAMPTAKRLWER*GAGNSW
Trigger: CCAGCTATTGCCTGCCCCCCACCTTTCCCAAAGCCT...CTTGGCAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp TCTCCGGTCTCCAGTGATGGTGCCCACGAAGCAAGCCGGGCAACGTTCACGGGCAGCAGAGGTCCTGCATaGTCACGTCCCATACCTCAA +
Preference number: 4 (lower is better)
Translates to: SPVSSDGAHEASRATFTGSRGPA*SRPIPQ
Trigger: TTGAGGTATGGGACGTGACCATGCAGGACCTCTGCT...GCCCGTGAACGTTGCCCGGCTTGCTTCGTGGGCACCATCACTGGAGACCGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp TCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCCAGCTGCCCACCCTTTaGCAGAGCCCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: SRVQFRALIKSWSQGEVVQLPTL*QSPGHL
Trigger: CAGATGTCCTGGGCTCTGCCAAAGGGTGGGCAGCTG...GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp TCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAAGGCCTGGCCGGGCTaGCTGGGAGTCAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SGIDKELEPGGGGQSIKWKAWPG*LGVRAH
Trigger: ATGGGCCCTGACTCCCAGCCAGCCCGGCCAGGCCTT...CCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACGGCATGACAGCCAGGTaGCGGCCATCACAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNGMTAR*RPSQEQ
Trigger: CTGCTCCTGTGATGGCCGCCACCTGGCTGTCATGCC...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp AAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCGGTCAGAGTATCAAATaGAGGGGGTCGCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: KLVSSQRARSSPTGSSRTGQSIK*RGSPCP
Trigger: TGGGCATGGCGACCCCCTCCATTTGATACTCTGACC...GGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGGCATTGATAAAGAGCTaGAGCCAGGGGGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: EPGGGGQSIKWRGSPCPLALIKS*SQGEVV
Trigger: GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGC...CAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACCCAGGTGAGCCCCTGTaGCCAGTCAGCAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNPGEPL*PVSSSL
Trigger: AAGGGAGCTGCTGACTGGCCACAGGGGCTCACCTGG...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp GGCCAGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGCCAGGTGAGCCCCTGTaGCCAGTCAGCAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GQSAAPFQGPVSGIDKELPGEPL*PVSSSL
Trigger: AAGGGAGCTGCTGACTGGCCACAGGGGCTCACCTGG...CAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp GTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGTCAGGAACATGGTaGGTGTCAGCCAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: VAGPAGNSSPPRGLAAPQQSGTW*VSASSI
Trigger: GATGGAACTGGCTGACACCCACCATGTTCCTGACTG...TTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS-3UTR CCA 90 bp AAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCGTGCAGTCAGGAACATaGTGGGTGTCAGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KLVSSQRARSSPTGSSRTVQSGT*WVSASS
Trigger: GGAACTGGCTGACACCCACCATGTTCCTGACTGCAC...GGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR CAA 72 bp TGCACCAGCTTCTGCCCATCCACGTGGAGCTGGCCCTaGAAGAACCAGTGTCGGCTGTGCTCGCTATTGGAC +
Preference number: 4 (lower is better)
Translates to: CTSFCPSTWSWP*KNQCRLCSLLD
Trigger: GTCCAATAGCGAGCACAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAAGCTGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CAA 72 bp CTCTGCTGTGAAGACAACATGTCTCAGCCCTTGCTGTaGCTGGAAGCGGCTTGGCCGTGTGGGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LCCEDNMSQPLL*LEAAWPCGVLR
Trigger: CCTGAGGACCCCACACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGAGACATGTTGTCTTCACAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp ATGAAGGCTGCAGATGGGGTTTCCCTTGGGGGCCTCCACACAAGCCCTGATCACAGCGGCTGGTGTAAATaGTGGCTCCAGCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: MKAADGVSLGGLHTSPDHSGWCK*WLQLGH
Trigger: GTGACCCAGCTGGAGCCATCATTTACACCAGCCGCT...GTGATCAGGGCTTGTGTGGAGGCCCCCAAGGGAAACCCCATCTGCAGCCTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTCATCCCGGAGGTCAGTaGCCAGAGCAAACACCAGGT +
Preference number: 4 (lower is better)
Translates to: PFQGPVSGIDKELEPGGGHPGGQ*PEQTPG
Trigger: ACCTGGTGTTTGCTCTGGTCACTGACCTCCGGGATG...ACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTGCCCCAGCCCTGGGATaGAAGGTCACAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGAPALG*KVTAAA
Trigger: GGCAGCTGCTGTGACCTTTCATCCCAGGGCTGGGGC...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR TCA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACCAGGACCCACTTAGGTaGAAAGCCATGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNQDPLR*KAMGPR
Trigger: CCTGGGCCCCATGGCTTTTCACCTAAGTGGGTCCTG...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp GGCCAGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGCAGGACCCACTTAGGTaGAAAGCCATGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GQSAAPFQGPVSGIDKELQDPLR*KAMGPR
Trigger: CCTGGGCCCCATGGCTTTTCACCTAAGTGGGTCCTG...CAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR GCA 90 bp AAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCGCTCTTTTAGGACATTaGCATTGCCACCAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: KLVSSQRARSSPTGSSRTALLGH*HCHQRP
Trigger: AGGGCGCTGGTGGCAATGGCAATGTCCTAAAAGAGC...GGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp AGAAGCTCCATTACTGGCTTCAATGGCAACCTCCAGGGGCCGGGCAAAATTCCCTCTGCCAGAGGAGTTTaGAGGGGCCCCACGCACTGC +
Preference number: 4 (lower is better)
Translates to: RSSITGFNGNLQGPGKIPSARGV*RGPTHC
Trigger: GCAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGA...GGGAATTTTGCCCGGCCCCTGGAGGTTGCCATTGAAGCCAGTAATGGAGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGGCCGTCCTCCTCATGGCTCAGTaGCACAACCGCTACATCTGC +
Preference number: 4 (lower is better)
Translates to: PNAPTKHDGLDPLTPLAVLLMAQ*HNRYIC
Trigger: GCAGATGTAGCGGTTGTGGCACTGAGCCATGAGGAG...GACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CTGTTCCATCTCCGGGTCTCCTCGCTGCACAGCCCCAAAGTCCAGGTCACTGGTCCTCTCCCTTCAGGATaGTTGAGGTCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: LFHLRVSSLHSPKVQVTGPLPSG*LRSGVT
Trigger: TGTGACCCCAGACCTCAAGCATCCTGAAGGGAGAGG...ACCAGTGACCTGGACTTTGGGGCTGTGCAGCGAGGAGACCCGGAGATGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp GGTGAGGGGCTGATCTGCATACTATTGCTGAATTTGTCTGCACCCGCTAACCCCGCCAGGTCTGGCTCCTaGACCTCCAGCACGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GEGLICILLLNLSAPANPARSGS*TSSTRP
Trigger: AGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGC...GGGGTTAGCGGGTGCAGACAAATTCAGCAATAGTATGCAGATCAGCCCCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp TCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCGTCAGGGCCCATCTCTaGAGCATCCTCATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SRVQFRALIKSWSQGEVVVRAHL*SILIGV
Trigger: GACCCCAATGAGGATGCTGCAGAGATGGGCCCTGAC...GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR GCA 90 bp AGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACACCGGTCATCACAGGAGCAGATaGCAGCCACGCCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RKGSAKHPSEPRRQLHTGHHRSR*QPRPLG
Trigger: CCCCAGGGGGCGTGGCTGGCATCTGCTCCTGTGATG...ACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp GTGCTCATGATGGACTCAAACAGTGAGTGCACCAGCTTCTGCCCATCCACGTGGTGGAGGGGGTCGCCATaGCCACTGCCAAGGCCTAAC +
Preference number: 4 (lower is better)
Translates to: VLMMDSNSECTSFCPSTWWRGSP*PLPRPN
Trigger: GTTAGGCCTTGGCAGTGGGCATGGCGACCCCCTCCA...CCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATCATGAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCCCAGGAGGCAGAGGTTaGAGTGGGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSPGGRG*SGPRSR
Trigger: GCGTGATCTCGGCCCACTGCAACCTCTGCCTCCTGG...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp GCCGCCCACGAAGGCCACGCCACGGAAAGTGTCCAGCCCAATTGCCCCAGAGCACAGAAGCTCCATTACTaGCTTCAATGGCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: AAHEGHATESVQPNCPRAQKLHY*LQWQPP
Trigger: TGGAGGTTGCCATTGAAGCCAGTAATGGAGCTTCTG...TGCTCTGGGGCAATTGGGCTGGACACTTTCCGTGGCGTGGCCTTCGTGGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CAAAGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGAAGCGCTTGGTGTGAAGCCAGCCAGCACTaGTTCCCCAAACTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: QRPPQCSGSAVAPGSAWCEASQH*FPKLVA
Trigger: GGCAACAAGTTTGGGGAACCAGTGCTGGCTGGCTTC...ACACCAAGCGCTTCCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CTGTTCCATCTCCGGGTCTCCTCGCTGCACAGCCCCAAAGTCCAGGTCACTGGTCCTATGAGCTCCTCATaGCTCAGTGCCACAACCGCT +
Preference number: 4 (lower is better)
Translates to: LFHLRVSSLHSPKVQVTGPMSSS*LSATTA
Trigger: AGCGGTTGTGGCACTGAGCCATGAGGAGCTCATAGG...ACCAGTGACCTGGACTTTGGGGCTGTGCAGCGAGGAGACCCGGAGATGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTAGCTGGGAGAAGCACTaGGCCAGAGCTGTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGSWEKH*ARAVPP
Trigger: CGGGGGCACAGCTCTGGCCCAGTGCTTCTCCCAGCT...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CCCTGGGGACCCATTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCACAGGACATCAACCCTaGGGACAGGCACATCCACCT +
Preference number: 4 (lower is better)
Translates to: PWGPIGIQRVLLCGVPVITGHQP*GQAHPP
Trigger: AGGTGGATGTGCCTGTCCCCAGGGTTGATGTCCTGT...GATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAATGGGTCCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCACCTGGCCGGGCTGGCTaGGAGTCAGGGCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPPGRAG*ESGPIS
Trigger: AGAGATGGGCCCTGACTCCCAGCCAGCCCGGCCAGG...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAACCTGGCCGGGCTGGCTaGGAGTCAGGGCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LRPALRQPETLRNFHKQQPGRAG*ESGPIS
Trigger: AGAGATGGGCCCTGACTCCCAGCCAGCCCGGCCAGG...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCCGCCCAGACAGGTTGTaGCGTAGCAGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSRPDRL*RSRRPG
Trigger: GCCAGGCCTTCTGCTACGCCACAACCTGTCTGGGCG...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGGCCGTCGGAGCCAGGGGGAGGTaGTCAGAGTATCAAATGGAG +
Preference number: 4 (lower is better)
Translates to: PNAPTKHDGLDPLTPLAVGARGR*SEYQME
Trigger: CTCCATTTGATACTCTGACCACCTCCCCCTGGCTCC...GACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CAGCTCCAGGCAATGGAGGCCAGCATCCCGGTAACGCTTCAGCACCTGGGCCAGCGGACTTCCTTTCCCTaGATTGCACTGTGGACATAC +
Preference number: 4 (lower is better)
Translates to: QLQAMEASIPVTLQHLGQRTSFP*IALWTY
Trigger: GTATGTCCACAGTGCAATCCAGGGAAAGGAAGTCCG...CTGGCCCAGGTGCTGAAGCGTTACCGGGATGCTGGCCTCCATTGCCTGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCAGTGGAGCCCTCCACACAAGCCCTaGTCACACGGTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: QRVLLCGVPVIISPVQWSPPHKP*SHGSSS
Trigger: AGAAGATGAACCGTGTGATCAGGGCTTGTGTGGAGG...GCTCCACTGCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp TCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGCAAACACCAGGTTGGTaGGGGCTTCGGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: SGIDKELEPGGGGQSIKWQTPGW*GLRPRP
Trigger: TGGCCGTGGCCGAAGCCCTCACCAACCTGGTGTTTG...CCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp AGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACACCGGTCCCGAGCAGCCATGCTaGGGGAGTCCTTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: RKGSAKHPSEPRRQLHTGPEQPC*GSPCHH
Trigger: ATGGTGGCAAGGACTCCCTCAGCATGGCTGCTCGGG...ACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp TGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCAAGCAGAGCCAGCAGTTaGCAGCCATTACACACGCCC +
Preference number: 4 (lower is better)
Translates to: WDSEGTALWGSRHHQPSASRASS*QPLHTP
Trigger: GGGCGTGTGTAATGGCTGTCAACTGCTGGCTCTGCT...TGCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR TCA 90 bp GGCCAGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGCCCCTGGCCTCAATCTaGGCTTGGAGTTCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: GQSAAPFQGPVSGIDKELPLASI*AWSSGE
Trigger: TTCTCCGGAACTCCAAGCTCAGATTGAGGCCAGGGG...CAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR TCA 90 bp GGACATCAACCCTGGGGACAGGCACATCCACCTGTAGCCCGCAATTTCCAGCAACCCCTGGCCTCAATCTaGGCTTGGAGTTCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: GHQPWGQAHPPVARNFQQPLASI*AWSSGE
Trigger: TTCTCCGGAACTCCAAGCTCAGATTGAGGCCAGGGG...TTGCTGGAAATTGCGGGCTACAGGTGGATGTGCCTGTCCCCAGGGTTGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGAACGGCCCGCTCAGGGTaGGGCATGACAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: IDTATEGTSAGRLSSPLRTARSG*GMTARW
Trigger: CCACCTGGCTGTCATGCCTCACCCTGAGCGGGCCGT...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCAGGGCCCCGCGGCCTGTaGACTGGACATCTCGAATCC +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPGPRGL*TGHLES
Trigger: GGATTCGAGATGTCCAGTGCACAGGCCGCGGGGCCC...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp GAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTCGCCATGCCCACTGCTGGTGTTATCTCCCTaGACCTGCACAGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: EPGGGGQSIKWRGSPCPLLVLSP*TCTDEA
Trigger: TGCTTCATCTGTGCAGGTGCAGGGAGATAACACCAG...CAGTGGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTAAGGGGCCCCACGCACTaGTGCTGGGCCACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLRGPTH*CWATRP
Trigger: AGGCCTGGTGGCCCAGCAGCAGTGCGTGGGGCCCCT...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCCAGGGCTGCCATCACTaGCACCATAGCCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSQGCHH*HHSLTG
Trigger: GCCTGTGAGGCTATGGTGGCAGTGATGGCAGCCCTG...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCAGCCAGGTCTGGCTCCTaGACCTCCAGCACGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPARSGS*TSSTRP
Trigger: AGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGC...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCAGCCCCGTTCCTCCTCTaGCACACAGCGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPAPFLL*HTARLC
Trigger: GCAGAGCCTCGCTGTGTGGCAGAGGAGGAACGGGGC...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp ACTGAGGATGTTTCATCATGGACATCTCAGGGATGGGAAGTCTCAGAGGGGTGCGCCCCGTTCCTCCTCTaGCACACAGCGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TEDVSSWTSQGWEVSEGCAPFLL*HTARLC
Trigger: GCAGAGCCTCGCTGTGTGGCAGAGGAGGAACGGGGC...GCACCCCTCTGAGACTTCCCATCCCTGAGATGTCCATGATGAAACATCCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS-3UTR GCA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACCCAGAGCAGAGGTCCTaGATGGTCACGTCCCATACC +
Preference number: 4 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNPEQRS*MVTSHT
Trigger: GGTATGGGACGTGACCATGCAGGACCTCTGCTCTGG...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp GGTGAGGGGCTGATCTGCATACTATTGCTGAATTTGTCTGCACCCGCTAACCCCTGGAGGGGGTCGCCATaGCCACTGCCAAGGCCTAAC +
Preference number: 4 (lower is better)
Translates to: GEGLICILLLNLSAPANPWRGSP*PLPRPN
Trigger: GTTAGGCCTTGGCAGTGGGCATGGCGACCCCCTCCA...GGGGTTAGCGGGTGCAGACAAATTCAGCAATAGTATGCAGATCAGCCCCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp CCCTGGGGACCCATTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCTATCAGAAACAGAGCTaGTGGGCCAGCTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: PWGPIGIQRVLLCGVPVIYQKQS*WASCSG
Trigger: GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATA...GATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAATGGGTCCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS-3UTR CCA 90 bp CACCTTATTGGTGAGGTAGCGCTTGCTGGCCACGGCGGGCAGCCTCAGAACCCTACACTGACACGATGTTaGTGGATGTTGGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: HLIGEVALAGHGGQPQNPTLTRC*WMLGWR
Trigger: TCTCCACCCCAACATCCACCAACATCGTGTCAGTGT...AGGGTTCTGAGGCTGCCCGCCGTGGCCAGCAAGCGCTACCTCACCAATAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GAGAGCCCCAACCACCTCTATCAGAAACAGAGCTGCTGGGCCAGCTGTAGTGGCGCTCCTGGAAGCGCTTaGTGTAGAAGTCTAGGTCCC +
Preference number: 4 (lower is better)
Translates to: ESPNHLYQKQSCWASCSGAPGSA*CRSLGP
Trigger: GGGACCTAGACTTCTACACCAAGCGCTTCCAGGAGC...GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATAGAGGTGGTTGGGGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp GAGAGCCCCAACCACCTCTATCAGAAACAGAGCTGCTGGGCCAGCTGTAGTGGCTTCTGCCCATCCACGTaGAGCTGGCCCTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ESPNHLYQKQSCWASCSGFCPST*SWPLKN
Trigger: GTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAA...GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATAGAGGTGGTTGGGGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCAGCCCTTGCTGTTGCTaGAAGCGGCTTGGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSSPCCC*KRLGRV
Trigger: CACACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCT...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp AGGACACTCCCGATCGTCCACCAGCACTATTCTCCGGTCTCCAGTGATGGTGCCTTCCATGCCTGGCTCTaGGGCCTCCTTGCTTATGTG +
Preference number: 4 (lower is better)
Translates to: RTLPIVHQHYSPVSSDGAFHAWL*GLLAYV
Trigger: CACATAAGCAAGGAGGCCCCAGAGCCAGGCATGGAA...GGCACCATCACTGGAGACCGGAGAATAGTGCTGGTGGACGATCGGGAGTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GAGAGCCCCAACCACCTCTATCAGAAACAGAGCTGCTGGGCCAGCTGTAGTGGCTACAACTTCCATGCCTaGCTCTGGGGCCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ESPNHLYQKQSCWASCSGYNFHA*LWGLLA
Trigger: AGCAAGGAGGCCCCAGAGCCAGGCATGGAAGTTGTA...GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATAGAGGTGGTTGGGGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGACCCACGCACTGCTGCTaGGCCACCAGGCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: IDTATEGTSAGRLSSPLRPTHCC*ATRPPT
Trigger: TGTGGGAGGCCTGGTGGCCCAGCAGCAGTGCGTGGG...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCATGGCGACTCGGGGGCTaGGACCACCAGGCTCACGGG +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIAWRLGG*DHQAHG
Trigger: CCCGTGAGCCTGGTGGTCCCAGCCCCCGAGTCGCCA...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTATGGCGACTCGGGGGCTaGGACCACCAGGCTCACGGG +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLWRLGG*DHQAHG
Trigger: CCCGTGAGCCTGGTGGTCCCAGCCCCCGAGTCGCCA...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp ATGAAGGCTGCAGATGGGGTTTCCCTTGGGGGCCTCCACACAAGCCCTGATCACGAGGGTACTGCTCTGTaGGGTTCCCGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: MKAADGVSLGGLHTSPDHEGTAL*GSRHHQ
Trigger: CTGATGATGACGGGAACCCCACAGAGCAGTACCCTC...GTGATCAGGGCTTGTGTGGAGGCCCCCAAGGGAAACCCCATCTGCAGCCTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CAA 72 bp AGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATaGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SQQLPSRVQFRA*IKSWSQGEVVR
Trigger: TCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
3UTR CAA 72 bp GTGAGTCTCTGCTGTGAAGACAACATGTCTCAGCCCTaGCTGTTGCTGGAAGCGGCTTGGCCGTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: VSLCCEDNMSQP*LLLEAAWPCGV
Trigger: GACCCCACACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGAGACATGTTGTCTTCACAGCAGAGACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp TCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGGGTCCAGCAGGCTCTTaGCTGGCTGTTCTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SGIDKELEPGGGGQSIKWGPAGS*LAVLPR
Trigger: CCTTGGGAGAACAGCCAGTCAAGAGCCTGCTGGACC...CCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp GGATCAGGGAGGATGAGGGCTAGGACGGCAGGACTGAGGATGTTTCATCATGGAACTGACATCGTGGCCTaGGCAGAGGAGGCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GSGRMRARTAGLRMFHHGTDIVA*AEEAVF
Trigger: AAAGACCGCCTCCTCTGCTCAGGCCACGATGTCAGT...TCCATGATGAAACATCCTCAGTCCTGCCGTCCTAGCCCTCATCCTCCCTGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS-3UTR TCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCAGCAGAGCCAGCAGTTaGCAGCCATTACACACGCCC +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSSRASS*QPLHTP
Trigger: GGGCGTGTGTAATGGCTGTCAACTGCTGGCTCTGCT...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGAGCTCAGGGTGAGGCATaGCAGCCAGGTGGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: IDTATEGTSAGRLSSPLRAQGEA*QPGGGH
Trigger: ATGGCCGCCACCTGGCTGTCATGCCTCACCCTGAGC...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTAACGGCCCGCTCAGGGTaGGGCATGACAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLTARSG*GMTARW
Trigger: CCACCTGGCTGTCATGCCTCACCCTGAGCGGGCCGT...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGAAGCAATAGCCGGCAGTaGCAGCCACCACGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: IDTATEGTSAGRLSSPLRSNSRQ*QPPRGP
Trigger: GGGCCCACGTGGTGGCTGGCACTGCCGGCTATTGCT...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp CTGTTCCATCTCCGGGTCTCCTCGCTGCACAGCCCCAAAGTCCAGGTCACTGGTTTAGGACATTGCCATTaGCACCAGCGCCCTGATCAT +
Preference number: 4 (lower is better)
Translates to: LFHLRVSSLHSPKVQVTGLGHCH*HQRPDH
Trigger: ATGATCAGGGCGCTGGTGGCAATGGCAATGTCCTAA...ACCAGTGACCTGGACTTTGGGGCTGTGCAGCGAGGAGACCCGGAGATGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CAGAGCAGAGGTCCTGCATGGTCACGTCCCATACCTCAAACCCAGCTAAGTGGAAGAGCCCAGGACATCTaGATAGCTGAAGCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: QSRGPAWSRPIPQTQLSGRAQDI*IAEAAH
Trigger: GTGGGCGGCTTCAGCTATGCAGATGTCCTGGGCTCT...TCCACTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCAGGACCTCTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CCGGCCCCCTGTGCCAGTGGTTGCACCACTAAAGGGGCATACTCCTGTGGGAAACTGACACGATGTTGGTaGATGTTGGGGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PAPCASGCTTKGAYSCGKLTRCW*MLGWRS
Trigger: ACTTCTCCACCCCAACATCCACCAACATCGTGTCAG...TTTCCCACAGGAGTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGGGGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CTTCAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTGGCTCGGGCAGATTGTAACCTaGAATATGCAGATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LQHLGQVWLLHLQHEAWLGQIVT*NMQISK
Trigger: TTTGGAAATCTGCATATTCCAGGTTACAATCTGCCC...GAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACACAGGACATCAACCCTaGGGACAGGCACATCCACCT +
Preference number: 4 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNTGHQP*GQAHPP
Trigger: AGGTGGATGTGCCTGTCCCCAGGGTTGATGTCCTGT...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACGGGGCAGGCAATAGCTaGGCCCCATCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNGAGNS*APSAPS
Trigger: TGAGGGAGCGGATGGGGCCCAGCTATTGCCTGCCCC...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACCCTCCTCTCGCAAGATaGCGACTCGGGGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNPPLAR*RLGGWD
Trigger: GTCCCAGCCCCCGAGTCGCCATCTTGCGAGAGGAGG...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp GACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTGCCAGCCACGCCCCCTaGGGACCCATTGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: DTATEGTSAGRLSSPLRFASHAP*GPIGIQ
Trigger: CTGAATCCCAATGGGTCCCCAGGGGGCGTGGCTGGC...AAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CAACTCCAATCCTGTAGACGGGACCTCCAACCTTTACAACTTCCATGCCTGGCTGGCATGACAGCCAGGTaGCGGCCATCACAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QLQSCRRDLQPLQLPCLAGMTAR*RPSQEQ
Trigger: CTGCTCCTGTGATGGCCGCCACCTGGCTGTCATGCC...AGCCAGGCATGGAAGTTGTAAAGGTTGGAGGTCCCGTCTACAGGATTGGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCAGGCAGAGGTTGCAGTaGGCCGAGATCACGCCATTG +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSRQRLQ*AEITPL
Trigger: CAATGGCGTGATCTCGGCCCACTGCAACCTCTGCCT...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp AGGGCCAAGGGAGTTGGGGCGGGATCAGGGAAATGCAGGAAGGGCCAGGGTGAGGAGGATGTTTCATCATaGACATCTCAGGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: RAKGVGAGSGKCRKGQGEEDVSS*TSQGWE
Trigger: TTCCCATCCCTGAGATGTCCATGATGAAACATCCTC...CTCACCCTGGCCCTTCCTGCATTTCCCTGATCCCGCCCCAACTCCCTTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS-3UTR TCA 90 bp AGAAGAAAATGCTACGTAACCTTCCCCGTGCGCACTCCACACGGGCAGCACGGCCCTGTGGGAAAGTTGTaGGTCTCTGCTGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: RRKCYVTFPVRTPHGQHGPVGKL*VSAVKT
Trigger: TGTCTTCACAGCAGAGACTCACAACTTTCCCACAGG...GCCGTGCTGCCCGTGTGGAGTGCGCACGGGGAAGGTTACGTAGCATTTTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CAGAGCAGAGGTCCTGCATGGTCACGTCCCATACCTCAAACCCAGCTAAGTGGACCTGGCCATTTCTTCTaGCAGGACACTCCCGATCGT +
Preference number: 4 (lower is better)
Translates to: QSRGPAWSRPIPQTQLSGPGHFF*QDTPDR
Trigger: ACGATCGGGAGTGTCCTGTCAGAAGAAATGGCCAGG...TCCACTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCAGGACCTCTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp GGTGAGGGGCTGATCTGCATACTATTGCTGAATTTGTCTGCACCCGCTAACCCCGGTCCACCTTATTGGTaGGGTAGCGCTTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GEGLICILLLNLSAPANPGPPYW*GSACWP
Trigger: TGGCCAGCAAGCGCTACCTCACCAATAAGGTGGACC...GGGGTTAGCGGGTGCAGACAAATTCAGCAATAGTATGCAGATCAGCCCCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAAGGTCCAGCAGGCTCTTaGCTGGCTGTTCTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LRPALRQPETLRNFHKQQGPAGS*LAVLPR
Trigger: CCTTGGGAGAACAGCCAGTCAAGAGCCTGCTGGACC...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp AGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACACCGGTTCCCTTCAGGATGCTTaGGGTCTGGGGTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: RKGSAKHPSEPRRQLHTGSLQDA*GLGSQW
Trigger: CCACTGTGACCCCAGACCTCAAGCATCCTGAAGGGA...ACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTACACAGCCCCGTTCACTaGCACCCGGACCATGGCGTG +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLHSPVH*HPDHGV
Trigger: CACGCCATGGTCCGGGTGTCAGTGAACGGGGCTGTG...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACGCAATTGCACACCGGTaGTCACTGGGTGTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNAIAHR*SLGVVK
Trigger: CTTCACAACACCCAGTGATCACCGGTGTGCAATTGC...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp AGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACACCGGTTCAGTCTCGACGCCCTaGAGCTCTGGCAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RKGSAKHPSEPRRQLHTGSVSTP*SSGSFP
Trigger: AGGGAAACTGCCAGAGCTGCAGGGCGTCGAGACTGA...ACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp AGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACACCGGTATGGGATGGGGGAAGTaGTGCTCTGTCATCCGGTCG +
Preference number: 4 (lower is better)
Translates to: RKGSAKHPSEPRRQLHTGMGWGK*CSVIRS
Trigger: CGACCGGATGACAGAGCAGCACTTCCCCCATCCCAT...ACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp AGGACACTCCCGATCGTCCACCAGCACTATTCTCCGGTCTCCAGTGATGGTGCCTTATCTCCCTGCACCTaGACAGATGAAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RTLPIVHQHYSPVSSDGALSPCT*TDEAAP
Trigger: TGGAGCTGCTTCATCTGTGCAGGTGCAGGGAGATAA...GGCACCATCACTGGAGACCGGAGAATAGTGCTGGTGGACGATCGGGAGTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGTCCGGGTCTCCTCGCTaGACAGCCCCAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAESGSPR*TAPKSR
Trigger: CCTGGACTTTGGGGCTGTGCAGCGAGGAGACCCGGA...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp AGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCACAACCGCTACATCTaGCAGAGGAGTTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SQQLPSRVQFRALIKSWSHNRYI*QRSLQG
Trigger: CCCCTGCAAACTCCTCTGGCAGATGTAGCGGTTGTG...GCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACCCCTGGGAGCTTGGCTaGCCACATCCAGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNPWELG*PHPVPA
Trigger: AGCGGGAACTGGATGTGGGCAGCCAAGCTCCCAGGG...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp TTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATCCCTGGGAGCTTGGCTaGCCACATCCAGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: FRALIKSWSQGEVVRVSNPWELG*PHPVPA
Trigger: AGCGGGAACTGGATGTGGGCAGCCAAGCTCCCAGGG...ATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTAGGCATCCGCCAAAGCTaGGCCCTCCCCTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLGIRQS*ALPWEL
Trigger: AAGCTCCCAGGGGAGGGCGCAGCTTTGGCGGATGCC...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp GAGGACGTTGTTGGGGTTCGAGGATTCCTGGGTGCTCATGATGGACTCAAACAGCCAGAGCAGAGGTCCTaGATGGTCACGTCCCATACC +
Preference number: 4 (lower is better)
Translates to: EDVVGVRGFLGAHDGLKQPEQRS*MVTSHT
Trigger: GGTATGGGACGTGACCATGCAGGACCTCTGCTCTGG...CTGTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp GGTGAGGGGCTGATCTGCATACTATTGCTGAATTTGTCTGCACCCGCTAACCCCAGAGCCCAGGACATCTaGATAGCTGAAGCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: GEGLICILLLNLSAPANPRAQDI*IAEAAH
Trigger: GTGGGCGGCTTCAGCTATGCAGATGTCCTGGGCTCT...GGGGTTAGCGGGTGCAGACAAATTCAGCAATAGTATGCAGATCAGCCCCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp TCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGGTCAGGGCCCATCTCTaGAGCATCCTCATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SGIDKELEPGGGGQSIKWVRAHL*SILIGV
Trigger: GACCCCAATGAGGATGCTGCAGAGATGGGCCCTGAC...CCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR GCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTACTTCATGCCCACCCTTaGCCCCAACCCTCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLLHAHP*PQPSGP
Trigger: AGGGCCCGAGGGTTGGGGGCAAGGGTGGGCATGAAG...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS-3UTR CCA 90 bp GAGAGCCCCAACCACCTCTATCAGAAACAGAGCTGCTGGGCCAGCTGTAGTGGCGATGAATTAGGTTCGTaGAAGATGCACTCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: ESPNHLYQKQSCWASCSGDELGS*KMHSRP
Trigger: TGGCCGCGAGTGCATCTTCCACGAACCTAATTCATC...GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATAGAGGTGGTTGGGGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGGCCGTCATAGAAGTGAAGGACTaGGGACATCTCTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PNAPTKHDGLDPLTPLAVIEVKD*GHLCRC
Trigger: ACACCTGCAGAGATGTCCCCAGTCCTTCACTTCTAT...GACGGCCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GTGCTCATGATGGACTCAAACAGTGAGTGCACCAGCTTCTGCCCATCCACGTGGTTCTGCCCATCCACGTaGAGCTGGCCCTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VLMMDSNSECTSFCPSTWFCPST*SWPLKN
Trigger: GTTCTTCAAGGGCCAGCTCCACGTGGATGGGCAGAA...CCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATCATGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTACCGCGGCCTGTGCACTaGACATCTCGAATCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLPRPVH*TSRIRP
Trigger: GGGCCGGATTCGAGATGTCCAGTGCACAGGCCGCGG...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCTTCCATGCCTGGCTCTaGGGCCTCCTTGCTTATGTG +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSFHAWL*GLLAYV
Trigger: CACATAAGCAAGGAGGCCCCAGAGCCAGGCATGGAA...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAAAGATGGGGTTTCCCTTaGGGGCCTCCACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: VLRPALRQPETLRNFHKQRWGFP*GPPHKP
Trigger: GGGCTTGTGTGGAGGCCCCCAAGGGAAACCCCATCT...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGACCAGAGGCTGCAGCATaGGGGGCTTCCTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: IDTATEGTSAGRLSSPLRPEAAA*GASSAG
Trigger: TCCTGCAGAGGAAGCCCCCCATGCTGCAGCCTCTGG...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCCAGCAGGCTCTTGACTaGCTGTTCTCCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSQQALD*LFSQGC
Trigger: ACAGCCTTGGGAGAACAGCCAGTCAAGAGCCTGCTG...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCACCCGGACCATGGCGTaGGGCCCGGCCTCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFTRTMA*GPASPV
Trigger: CACAGGCGAGGCCGGGCCCCACGCCATGGTCCGGGT...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCCTGACACCCGGACCATaGCGTGGGGCCCGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PQATIPYIQCSVALQEKSLTPGP*RGARPR
Trigger: GCGAGGCCGGGCCCCACGCCATGGTCCGGGTGTCAG...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACCTGCAGCATCCTCATTaGGGTCGCCTCCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNLQHPH*GRLPPS
Trigger: GCTGGGTGGGAGGCGACCCCAATGAGGATGCTGCAG...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGACGCCCAGACAGGTTGTaGCGTAGCAGAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: IDTATEGTSAGRLSSPLRRPDRL*RSRRPG
Trigger: GCCAGGCCTTCTGCTACGCCACAACCTGTCTGGGCG...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp GAGGACGTTGTTGGGGTTCGAGGATTCCTGGGTGCTCATGATGGACTCAAACAGGTGGAGCCAAGCCCCTaGCCTCAATCTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: EDVVGVRGFLGAHDGLKQVEPSP*PQSELG
Trigger: TCCAAGCTCAGATTGAGGCCAGGGGCTTGGCTCCAC...CTGTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp GGATCAGGGAGGATGAGGGCTAGGACGGCAGGACTGAGGATGTTTCATCATGGACAGCACAGACAGGACTaGGAGAGCAATGTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GSGRMRARTAGLRMFHHGQHRQD*ESNVGS
Trigger: ACTCCCCACATTGCTCTCCCAGTCCTGTCTGTGCTG...TCCATGATGAAACATCCTCAGTCCTGCCGTCCTAGCCCTCATCCTCCCTGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR CAA 72 bp CCTCAGGCCGTAGGAATCGGACTTCCTTTCCCTGGATaGCACTGTGGACATACCCGTCATGGACCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PQAVGIGLPFPG*HCGHTRHGPCF
Trigger: GAAGCAAGGTCCATGACGGGTATGTCCACAGTGCAATCCAGGGAAAGGAAGTCCGATTCCTACGGCCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAAAGTGGCGCGGCACACTaGCACGATGTTGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: VLRPALRQPETLRNFHKQSGAAH*HDVGGC
Trigger: ACATCCACCAACATCGTGTCAGTGTGCCGCGCCACT...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp GAGAGCCCCAACCACCTCTATCAGAAACAGAGCTGCTGGGCCAGCTGTAGTGGCATTCCTGGGTGCTCATaGTGGACTCAAACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ESPNHLYQKQSCWASCSGIPGCS*WTQTVS
Trigger: ACTCACTGTTTGAGTCCATCATGAGCACCCAGGAAT...GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATAGAGGTGGTTGGGGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp TCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCATTCCTGGGTGCTCATaGTGGACTCAAACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SRVQFRALIKSWSQGEVVIPGCS*WTQTVS
Trigger: ACTCACTGTTTGAGTCCATCATGAGCACCCAGGAAT...GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCAGTGGAGCTGTTATCACAGAATTTaGGGACGTTGTTGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: QRVLLCGVPVIISPVQWSCYHRI*GRCWGS
Trigger: CGAACCCCAACAACGTCCTCAAATTCTGTGATAACA...GCTCCACTGCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACCCTGTGGGAAAGTTGTaGGTCTCTGCTGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNPVGKL*VSAVKT
Trigger: TGTCTTCACAGCAGAGACTCACAACTTTCCCACAGG...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAACTGCACCTGCACAGATaGAGCAGCTCCACCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LRPALRQPETLRNFHKQQLHLHR*SSSTSN
Trigger: GTTGGAGGTGGAGCTGCTTCATCTGTGCAGGTGCAG...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp GTGCTCATGATGGACTCAAACAGTGAGTGCACCAGCTTCTGCCCATCCACGTGGCAGCAGAAGAGCATTTaGTTCCTGGTACTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VLMMDSNSECTSFCPSTWQQKSI*FLVLSP
Trigger: GGGGCTGAGTACCAGGAATCAAATGCTCTTCTGCTG...CCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATCATGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp TTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGACATCTGCATAGCTaGAGCCGCCCACGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FRALIKSWSQGEVVRVSNGHLHS*SRPRRP
Trigger: TGGCCTTCGTGGGCGGCTTCAGCTATGCAGATGTCC...ATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR TCA 90 bp AGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGGGCCCCAGCCCTGGGATaGAAGGTCACAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RRNISRQIIESAEILAFWAPALG*KVTAAA
Trigger: GGCAGCTGCTGTGACCTTTCATCCCAGGGCTGGGGC...CCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGCAGGACCCACTTAGGTaGAAAGCCATGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAEQDPLR*KAMGPR
Trigger: CCTGGGCCCCATGGCTTTTCACCTAAGTGGGTCCTG...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp AGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCTGCTGTTTCCTGGGCTaGGAAAGGGCATGCCATGTT +
Preference number: 4 (lower is better)
Translates to: SQQLPSRVQFRALIKSWSCCFLG*ERACHV
Trigger: AACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCA...GCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS-3UTR TCA 90 bp GAGAGCCCCAACCACCTCTATCAGAAACAGAGCTGCTGGGCCAGCTGTAGTGGCGCCTGGGAGACATGGTaGAACCCTATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ESPNHLYQKQSCWASCSGAWETW*NPISTK
Trigger: TTTAGTAGAGATAGGGTTTCACCATGTCTCCCAGGC...GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATAGAGGTGGTTGGGGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp TTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCTCTGGCAGTTTCCCTTaGAGTTTCCTCCGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LGFRGYCSVGFPSSSAQCSGSFP*SFLRVC
Trigger: ACACACTCGGAGGAAACTGCAAGGGAAACTGCCAGA...GCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp AGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACACCGGTCCCTGTGCCAGTGGTTaGACCACTAAAGGGGCATAC +
Preference number: 4 (lower is better)
Translates to: RKGSAKHPSEPRRQLHTGPCASG*TTKGAY
Trigger: GTATGCCCCTTTAGTGGTGCAACCACTGGCACAGGG...ACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGTGCCACACCCAGGGCTaGCATCACTGCCACCATAGC +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAECHTQG*HHCHHS
Trigger: GCTATGGTGGCAGTGATGGCAGCCCTGGGTGTGGCA...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAAAAAGGTCACAGCAGCTaGCCACCCTTTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VLRPALRQPETLRNFHKQKGHSS*PPFGRA
Trigger: GGCTCTGCCAAAGGGTGGGCAGCTGCTGTGACCTTT...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp TCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGCCATCCACGTGGAGCTaGCCCTTGAAGAACCAGTGT +
Preference number: 4 (lower is better)
Translates to: SGIDKELEPGGGGQSIKWPSTWS*PLKNQC
Trigger: ACACTGGTTCTTCAAGGGCCAGCTCCACGTGGATGG...CCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp CTTTTCCTTGTCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAAGCTGGGAGAAGCACTaGGCCAGAGCTGTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LFLVALFSEPHAVSWAEKSWEKH*ARAVPP
Trigger: CGGGGGCACAGCTCTGGCCCAGTGCTTCTCCCAGCT...TTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGACAAGGAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp AGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACACCGGTACAGGACATCAACCCTaGGGACAGGCACATCCACCT +
Preference number: 4 (lower is better)
Translates to: RKGSAKHPSEPRRQLHTGTGHQP*GQAHPP
Trigger: AGGTGGATGTGCCTGTCCCCAGGGTTGATGTCCTGT...ACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACTCCAGCACGAGGCCTaGCTCCTCAGCGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIALQHEA*LLSEQH
Trigger: GTGCTGTTCGCTGAGGAGCCAGGCCTCGTGCTGGAG...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAATGTAGCCGGTCCAGCTaGAAACTCGTCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLRPALRQPETLRNFHKQCSRSS*KLVSSQ
Trigger: CTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACA...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp AGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGGGGGGCAGGCAATAGCTaGGCCCCATCCGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RRNISRQIIESAEILAFWGAGNS*APSAPS
Trigger: TGAGGGAGCGGATGGGGCCCAGCTATTGCCTGCCCC...CCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTAGGCATGACAGCCAGGTaGCGGCCATCACAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLGMTAR*RPSQEQ
Trigger: CTGCTCCTGTGATGGCCGCCACCTGGCTGTCATGCC...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp GGAGGCAATTGCACACCGGTGATCACTGGGTGTTGTGAAGTGGGCAACAGAAGCCTGGGTGTTGTGAAGTaGGCAACAGAAGCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: GGNCTPVITGCCEVGNRSLGVVK*ATEAPV
Trigger: AACAGGGGCTTCTGTTGCCCACTTCACAACACCCAG...GCTTCTGTTGCCCACTTCACAACACCCAGTGATCACCGGTGTGCAATTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACTGTGGCAGCCCCTATaGGCTCCTCATGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIALWQPL*APHGSV
Trigger: CACTGAGCCATGAGGAGCTCATAGGGGCTGCCACAG...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGCCCCAGCCCTGGGATaGAAGGTCACAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFAPALG*KVTAAA
Trigger: GGCAGCTGCTGTGACCTTTCATCCCAGGGCTGGGGC...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp AGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGGTACACACGCCCAGGCTaGAGGTGTCTGGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RRNISRQIIESAEILAFWYTRPG*RCLAAS
Trigger: GGAAGCGGCCAGACACCTTCAGCCTGGGCGTGTGTA...CCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGAAGCAGAGCCAGCAGTTaGCAGCCATTACACACGCCC +
Preference number: 4 (lower is better)
Translates to: IDTATEGTSAGRLSSPLRSRASS*QPLHTP
Trigger: GGGCGTGTGTAATGGCTGTCAACTGCTGGCTCTGCT...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGACCCCTGGCCTCAATCTaGGCTTGGAGTTCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: IDTATEGTSAGRLSSPLRPLASI*AWSSGE
Trigger: TTCTCCGGAACTCCAAGCTCAGATTGAGGCCAGGGG...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGCCTTCCGAGGCATCTTaGCCAGCACCCATTCGAGCT +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAEPSEAS*PAPIRA
Trigger: AGCTCGAATGGGTGCTGGGCAAGATGCCTCGGAAGG...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCACTCCTCATGGCTCAGTaGCACAACCGCTACATCTGC +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPLLMAQ*HNRYIC
Trigger: GCAGATGTAGCGGTTGTGGCACTGAGCCATGAGGAG...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGACCAGAGCAGAGGTCCTaGATGGTCACGTCCCATACC +
Preference number: 4 (lower is better)
Translates to: IDTATEGTSAGRLSSPLRPEQRS*MVTSHT
Trigger: GGTATGGGACGTGACCATGCAGGACCTCTGCTCTGG...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGAGAGCCCAGGACATCTaGATAGCTGAAGCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAERAQDI*IAEAAH
Trigger: GTGGGCGGCTTCAGCTATGCAGATGTCCTGGGCTCT...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp TTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCTTCCGGAGAAGAAAATaGTACGTAACCTTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LGFRGYCSVGFPSSSAQCFRRRK*YVTFPV
Trigger: CACGGGGAAGGTTACGTAGCATTTTCTTCTCCGGAA...GCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTCATCACAGGAGCAGATaGCAGCCACGCCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFHHRSR*QPRPLG
Trigger: CCCCAGGGGGCGTGGCTGGCATCTGCTCCTGTGATG...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAAAGCCAAGGAGGCAATTaGACACCGGTGATCACTGGG +
Preference number: 4 (lower is better)
Translates to: VLRPALRQPETLRNFHKQSQGGN*TPVITG
Trigger: CCCAGTGATCACCGGTGTGCAATTGCCTCCTTGGCT...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp CTTTTCCTTGTCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAACCAGGAGGCAGAGGTTaGAGTGGGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: LFLVALFSEPHAVSWAEKPGGRG*SGPRSR
Trigger: GCGTGATCTCGGCCCACTGCAACCTCTGCCTCCTGG...TTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGACAAGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CAGAGCAGAGGTCCTGCATGGTCACGTCCCATACCTCAAACCCAGCTAAGTGGAGATGAATTAGGTTCGTaGAAGATGCACTCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: QSRGPAWSRPIPQTQLSGDELGS*KMHSRP
Trigger: TGGCCGCGAGTGCATCTTCCACGAACCTAATTCATC...TCCACTTAGCTGGGTTTGAGGTATGGGACGTGACCATGCAGGACCTCTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCATTGTCTCCTCAGCACTaGGGAGGGCCTCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIALSPQH*GGPQLS
Trigger: GGACAGCTGAGGCCCTCCCCAGTGCTGAGGAGACAA...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACTGGTGGATGTTGGGGTaGAGAAGTTCAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNWWMLG*RSSAWA
Trigger: GGCCCAGGCTGAACTTCTCCACCCCAACATCCACCA...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCCAGGCCCCAGCCCAGTaGCGCGGCACACTGACACGA +
Preference number: 4 (lower is better)
Translates to: PQATIPYIQCSVALQEKSQAPAQ*RGTLTR
Trigger: TCGTGTCAGTGTGCCGCGCCACTGGGCTGGGGCCTG...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp GGTGAGGGGCTGATCTGCATACTATTGCTGAATTTGTCTGCACCCGCTAACCCCGGGTTCGAGGATTCCTaGGTGCTCATGATGGACTCA +
Preference number: 4 (lower is better)
Translates to: GEGLICILLLNLSAPANPGFEDS*VLMMDS
Trigger: TGAGTCCATCATGAGCACCCAGGAATCCTCGAACCC...GGGGTTAGCGGGTGCAGACAAATTCAGCAATAGTATGCAGATCAGCCCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCACCTATGAGCTCCTCATaGCTCAGTGCCACAACCGCT +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPPMSSS*LSATTA
Trigger: AGCGGTTGTGGCACTGAGCCATGAGGAGCTCATAGG...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACAGGCTTTGGGAAAGGTaGGGGGCAGGCAATAGCTGG +
Preference number: 4 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNRLWER*GAGNSW
Trigger: CCAGCTATTGCCTGCCCCCCACCTTTCCCAAAGCCT...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAAGGCCTGGCCGGGCTaGCTGGGAGTCAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PQATIPYIQCSVALQEKSKAWPG*LGVRAH
Trigger: ATGGGCCCTGACTCCCAGCCAGCCCGGCCAGGCCTT...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGGTGGAGCCAAGCCCCTaGCCTCAATCTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAEVEPSP*PQSELG
Trigger: TCCAAGCTCAGATTGAGGCCAGGGGCTTGGCTCCAC...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp GACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTCCCCTGGGGACCCATTaGGATTCAGAGGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: DTATEGTSAGRLSSPLRFPLGTH*DSEGTA
Trigger: AGCAGTACCCTCTGAATCCCAATGGGTCCCCAGGGG...AAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAACCACATGCTGTTTCCTaGGCTGAGAAAGGGCATGCC +
Preference number: 4 (lower is better)
Translates to: LRPALRQPETLRNFHKQQPHAVS*AEKGHA
Trigger: GGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGG...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGAGGCAGAGGTTGCAGTaGGCCGAGATCACGCCATTG +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAERQRLQ*AEITPL
Trigger: CAATGGCGTGATCTCGGCCCACTGCAACCTCTGCCT...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp GATGTTTCATCATGGACATCTCAGGGATGGGAAGTCTCAGAGGGGTGCAGTCAGGTTCAGCATCAACCCTaGGGACAGGCACATCCACCT +
Preference number: 4 (lower is better)
Translates to: DVSSWTSQGWEVSEGCSQVQHQP*GQAHPP
Trigger: AGGTGGATGTGCCTGTCCCCAGGGTTGATGCTGAAC...CTGACTGCACCCCTCTGAGACTTCCCATCCCTGAGATGTCCATGATGAAACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS-3UTR CCA 90 bp ACTGAGGATGTTTCATCATGGACATCTCAGGGATGGGAAGTCTCAGAGGGGTGCTGGACATCTCAGGGATaGGAAGTCTCAGAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TEDVSSWTSQGWEVSEGCWTSQG*EVSEGC
Trigger: GCACCCCTCTGAGACTTCCCATCCCTGAGATGTCCA...GCACCCCTCTGAGACTTCCCATCCCTGAGATGTCCATGATGAAACATCCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578979.5
3UTR CAA 72 bp CAGTCTAGGGCACAGCACCTGCTGTTATCACAGAATTaGAGGACGTTGTTGGGGTTCGAGGATTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QSRAQHLLLSQN*RTLLGFEDSWV
Trigger: CACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGGTGCTGTGCCCTAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCACAGCAGAAGAGCATTTaGTTCCTGGTACTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPQQKSI*FLVLSP
Trigger: GGGGCTGAGTACCAGGAATCAAATGCTCTTCTGCTG...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCATTCTCCGGTCTCCAGTaGTGGTGCCCACGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIAFSGLQ*WCPRSK
Trigger: CTTGCTTCGTGGGCACCATCACTGGAGACCGGAGAA...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCAACTGACATCGTGGCCTaGGCAGAGGAGGCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIATDIVA*AEEAVF
Trigger: AAAGACCGCCTCCTCTGCTCAGGCCACGATGTCAGT...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTTACACACGCCCAGGCTaGAGGTGTCTGGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFYTRPG*RCLAAS
Trigger: GGAAGCGGCCAGACACCTTCAGCCTGGGCGTGTGTA...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGCTGTTTCCTGGGCTaGGAAAGGGCATGCCATGTT +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPCCFLG*ERACHV
Trigger: AACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCA...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAAGGCAGGAAAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LRPALRQPETLRNFHKQQGRKIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCAATTTTCCTGCC...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp AGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGGGGATGGGGGAAGTGCTaGTCTGTCATCCGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: RRNISRQIIESAEILAFWGWGKC*SVIRSC
Trigger: GCACGACCGGATGACAGAGCAGCACTTCCCCCATCC...CCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACAAAGGCCTCCACAGTaGTCGGGTTCCGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIAQRPPQ*SGSAVA
Trigger: AGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTG...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp GACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTCCTTTACAACTTCCATaGCTGGCTCTGGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: DTATEGTSAGRLSSPLRFPLQLP*LALGPP
Trigger: AGGAGGCCCCAGAGCCAGGCATGGAAGTTGTAAAGG...AAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACCACAACCGCTACATCTaGCAGAGGAGTTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNHNRYI*QRSLQG
Trigger: CCCCTGCAAACTCCTCTGGCAGATGTAGCGGTTGTG...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCCCCGCACGGTCTCAGTaGCAACCCGAGCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFPARSQ*QPEQPC
Trigger: GCATGGCTGCTCGGGTTGGCACTGAGACCGTGCGGG...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCATCATCATCAGCCCAGTaGAGTGGAGCCAAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIASSSAQ*SGAKPL
Trigger: CAGGGGCTTGGCTCCACTGCACTGGGCTGATGATGA...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGGGTCGCCATGCCCACTaGCAAGGCCTAACGGCCCGC +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQGRHAH*QGLTAR
Trigger: GCGGGCCGTTAGGCCTTGGCAGTGGGCATGGCGACC...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATATCAGAAACAGAGCTaGTGGGCCAGCTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPYQKQS*WASCSG
Trigger: GCCACTACAGCTGGCCCAGCAGCTCTGTTTCTGATA...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp TGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCACAGATACATACCAAATaGCTCACACATGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: WDSEGTALWGSRHHQPSAQIHTK*LTHAWL
Trigger: AAGCCACGCATGTGTGAGGCATTTGGTATGTATCTG...TGCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS-3UTR CCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACATTACTGGCTTCAATaGCAACCTCCAGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIAHYWLQ*QPPGAG
Trigger: CCCGGCCCCTGGAGGTTGCCATTGAAGCCAGTAATG...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp AGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACACCGGTCAAAGTCCAGGTCACTaGTGTTATCTCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: RKGSAKHPSEPRRQLHTGQSPGH*CYLPAP
Trigger: AGGTGCAGGGAGATAACACCAGTGACCTGGACTTTG...ACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCACCCTCTCCAGAGCCTaGTGCACGCTCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFTLSRA*CTLSPG
Trigger: CCCAGGGCTGAGCGTGCACCAGGCTCTGGAGAGGGT...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCAAGGATGCTTGAGGTCTaGGGTCACAGTGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPRMLEV*GHSGCD
Trigger: ATCACAGCCACTGTGACCCCAGACCTCAAGCATCCT...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCATGTAGCCGGTCCAGCTaGAAACTCGTCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIACSRSS*KLVSSQ
Trigger: CTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACA...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATGCCCCACACGCACGCTaGCCCAGCGAGACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHAPHAR*PSETRS
Trigger: GCTACGAGTCTCGCTGGGCCAGCGTGCGTGTGGGGC...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314666.11
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTAGTGGAGCCAAGCCCCTaGCCTCAATCTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLVEPSP*PQSELG
Trigger: TCCAAGCTCAGATTGAGGCCAGGGGCTTGGCTCCAC...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCGCCAGCCACGCCCCCTaGGGACCCATTGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFASHAP*GPIGIQ
Trigger: CTGAATCCCAATGGGTCCCCAGGGGGCGTGGCTGGC...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp TTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCAGTCCGCTGAGATTTTaGCATTTTGGTCCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LGFRGYCSVGFPSSSAQCSPLRF*HFGPCL
Trigger: CAGACAAGGACCAAAATGCCAAAATCTCAGCGGACT...GCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR TCA 90 bp AGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGGAGCGGCTGGTGTAAATaGTGGCTCCAGCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: RRNISRQIIESAEILAFWSGWCK*WLQLGH
Trigger: GTGACCCAGCTGGAGCCATCATTTACACCAGCCGCT...CCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCCAAACACCAGGTTGGTaGGGGCTTCGGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFQTPGW*GLRPRP
Trigger: TGGCCGTGGCCGAAGCCCTCACCAACCTGGTGTTTG...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGCACAGCCCCGTTCACTaGCACCCGGACCATGGCGTG +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQHSPVH*HPDHGV
Trigger: CACGCCATGGTCCGGGTGTCAGTGAACGGGGCTGTG...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCAGACAGCCAGAAACGCTaGGAAACTTCCACAAGCAAC +
Preference number: 4 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPDSQKR*ETSTSN
Trigger: GTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTC...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp CATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATAGCCTTCCTTGGGCCTaGCCTTCCCCGTGCGCACTC +
Preference number: 4 (lower is better)
Translates to: HSVQCSTSREIQKVSVPDSLPWA*PSPCAL
Trigger: GAGTGCGCACGGGGAAGGTCAGGCCCAAGGAAGGCT...ATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS-3UTR GCA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATAGCAATAGCCGGCAGTaGCAGCCACCACGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHSNSRQ*QPPRGP
Trigger: GGGCCCACGTGGTGGCTGGCACTGCCGGCTATTGCT...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000580356.5
CDS-3UTR GCA 90 bp AGAAGCTCCATTACTGGCTTCAATGGCAACCTCCAGGGGCCGGGCAAAATTCCCGTTCCCCAAACTTGTTaGCATAGTCAGAAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RSSITGFNGNLQGPGKIPVPQTC*HSQKLH
Trigger: ATGGAGCTTCTGACTATGGCAACAAGTTTGGGGAAC...GGGAATTTTGCCCGGCCCCTGGAGGTTGCCATTGAAGCCAGTAATGGAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR GCA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACTGGTGTTATCTCCCTaGACCTGCACAGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: VLRPALRQPETLRNFHKQLVLSP*TCTDEA
Trigger: TGCTTCATCTGTGCAGGTGCAGGGAGATAACACCAG...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGGCCCCGTTCCTCCTCTaGCACACAGCGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQAPFLL*HTARLC
Trigger: GCAGAGCCTCGCTGTGTGGCAGAGGAGGAACGGGGC...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCTGGAGGGGGTCGCCATaGCCACTGCCAAGGCCTAAC +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFWRGSP*PLPRPN
Trigger: GTTAGGCCTTGGCAGTGGGCATGGCGACCCCCTCCA...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTAGACGCCCTGCAGCTCTaGCAGTTTCCCTTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLDALQL*QFPLQF
Trigger: AAACTGCAAGGGAAACTGCCAGAGCTGCAGGGCGTC...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTAGGCTGTGCTCGCTATTaGACTGCGCCAAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLGCARY*TAPSQR
Trigger: CCTTTGACTTGGCGCAGTCCAATAGCGAGCACAGCC...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAACGCCGCTGGCCGTCTaGGAGCTGGAGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKTPLAV*ELEAQG
Trigger: TCCTTGGGCCTCCAGCTCCCAGACGGCCAGCGGCGT...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp GACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTGCCTCCTTGCTTATGTaGTCAGCTTCCATGGACCCA +
Preference number: 4 (lower is better)
Translates to: DTATEGTSAGRLSSPLRFASLLM*SASMDP
Trigger: TGGGTCCATGGAAGCTGACCACATAAGCAAGGAGGC...AAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTCAGGGCATTCAGGGTTaGGTCCCCAAGCTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFQGIQG*VPKLEA
Trigger: CGCTTCCAGCTTGGGGACCCAACCCTGAATGCCCTG...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTGCACGCTCAGCCCTaGGGGCAAGGCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKVHAQP*GQGQRL
Trigger: CAGCCTCTGGCCTTGCCCCCAGGGCTGAGCGTGCAC...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCCCGTCACTGACATCGTaGCCTGAGCAGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFPSLTS*PEQRRR
Trigger: CCGCCTCCTCTGCTCAGGCCACGATGTCAGTGACGG...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGCCTCCTCTCGCAAGATaGCGACTCGGGGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQPPLAR*RLGGWD
Trigger: GTCCCAGCCCCCGAGTCGCCATCTTGCGAGAGGAGG...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp TTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATTCAAACCCAGCTAAGTaGAAGGCATCGGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: FRALIKSWSQGEVVRVSNSNPAK*KASAIS
Trigger: GGAGATGGCCGATGCCTTCCACTTAGCTGGGTTTGA...ATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCCAGGCTGAAGGTGTCTaGCCGCTTCCGGAAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFQAEGV*PLPEAP
Trigger: AGGCGCTTCCGGAAGCGGCCAGACACCTTCAGCCTG...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTTTTCCTTGTCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAACAGAAACAGAGCTGCTaGGCCAGCTGTAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFLVALFSEPHAVSWAEKQKQSC*ASCSGS
Trigger: GGAGCCACTACAGCTGGCCCAGCAGCTCTGTTTCTG...TTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGACAAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
3UTR CAA 72 bp CAGCACCTGCTGTTATCACAGAATTTGAGGACGTTGTaGGGGTTCGAGGATTCCTGGGTGCTCATGATGGAC +
Preference number: 4 (lower is better)
Translates to: QHLLLSQNLRTL*GFEDSWVLMMD
Trigger: GTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
3UTR CAA 72 bp GCACAGCACCTGCTGTTATCACAGAATTTGAGGACGTaGTTGGGGTTCGAGGATTCCTGGGTGCTCATGATG +
Preference number: 4 (lower is better)
Translates to: AQHLLLSQNLRT*LGFEDSWVLMM
Trigger: CATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGGTGCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR TCA 90 bp CAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATGAGACGTGGAGCTGGCCCTTaGAGAACCAGTGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: QCSVALQEKSRKFQFQMRRGAGP*RTSVGC
Trigger: ACAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACG...TCTCATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATCCCGAGCAGCCATGCTaGGGGAGTCCTTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHPEQPC*GSPCHH
Trigger: ATGGTGGCAAGGACTCCCTCAGCATGGCTGCTCGGG...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000580356.5
CDS-3UTR TCA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTTCTGCATACTATTGCTaGATTTGTCTGCACCCGCTA +
Preference number: 4 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGSAYYC*ICLHPL
Trigger: TAGCGGGTGCAGACAAATTCAGCAATAGTATGCAGA...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS-3UTR TCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGAGAACAATGAGGTGGTaGGGGGCTGATCTGCATACT +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAERTMRW*GADLHT
Trigger: AGTATGCAGATCAGCCCCTCACCACCTCATTGTTCT...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGGACAGCCAGAAACGCTaGGAAACTTCCACAAGCAAC +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAEDSQKR*ETSTSN
Trigger: GTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTC...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTAGACTCAAACAGTGAGTaGACCAGCTTCTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLDSNSE*TSFCPS
Trigger: GGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTC...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTAGCTCTTTTAGGACATTaGCATTGCCACCAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLALLGH*HCHQRP
Trigger: AGGGCGCTGGTGGCAATGGCAATGTCCTAAAAGAGC...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp AGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGGCCTCTCCCTTCAGGATaGTTGAGGTCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: RRNISRQIIESAEILAFWPLPSG*LRSGVT
Trigger: TGTGACCCCAGACCTCAAGCATCCTGAAGGGAGAGG...CCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTCCCGGTCTCCATTACTaGCCTCCTCTCGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFPGLHY*PPLARW
Trigger: CCATCTTGCGAGAGGAGGGCAGTAATGGAGACCGGG...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp CTTTTCCTTGTCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAAGCCAAGGAGGCAATTaGACACCGGTGATCACTGGG +
Preference number: 4 (lower is better)
Translates to: LFLVALFSEPHAVSWAEKSQGGN*TPVITG
Trigger: CCCAGTGATCACCGGTGTGCAATTGCCTCCTTGGCT...TTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGACAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGAGGATACTGGAAGCTTaGATCCTCCCAGGGCAGATT +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAERILEA*ILPGQI
Trigger: AATCTGCCCTGGGAGGATCCAAGCTTCCAGTATCCT...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp TTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATCAAAGTCCAGGTCACTaGTGTTATCTCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: FRALIKSWSQGEVVRVSNQSPGH*CYLPAP
Trigger: AGGTGCAGGGAGATAACACCAGTGACCTGGACTTTG...ATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCATCAAACCCAGCTAAGTaGAAGGCATCGGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIASNPAK*KASAIS
Trigger: GGAGATGGCCGATGCCTTCCACTTAGCTGGGTTTGA...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCAAGCAGAGGTCCTGCATaGTCACGTCCCATACCTCAA +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIASRGPA*SRPIPQ
Trigger: TTGAGGTATGGGACGTGACCATGCAGGACCTCTGCT...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTTTTCCTTGTCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGAGGGTACTGCTCTGTaGGGTTCCCGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: LFLVALFSEPHAVSWAEKEGTAL*GSRHHQ
Trigger: CTGATGATGACGGGAACCCCACAGAGCAGTACCCTC...TTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGACAAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTTTTCCTTGTCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGTCAGAGTATCAAATaGAGGGGGTCGCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: LFLVALFSEPHAVSWAEKGQSIK*RGSPCP
Trigger: TGGGCATGGCGACCCCCTCCATTTGATACTCTGACC...TTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGACAAGGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp AGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGGGGAGCCAGGGGGAGGTaGTCAGAGTATCAAATGGAG +
Preference number: 4 (lower is better)
Translates to: RRNISRQIIESAEILAFWGARGR*SEYQME
Trigger: CTCCATTTGATACTCTGACCACCTCCCCCTGGCTCC...CCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp AGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGGCCACATGCTGTTTCCTaGGCTGAGAAAGGGCATGCC +
Preference number: 4 (lower is better)
Translates to: RRNISRQIIESAEILAFWPHAVS*AEKGHA
Trigger: GGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGG...CCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCATGTGAGTCTCTGCTGTaGAGACAACATGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIACESLL*RQHVSA
Trigger: GGCTGAGACATGTTGTCTTCACAGCAGAGACTCACA...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp AGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGGCCTCCACACAAGCCCTaGTCACACGGTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RRNISRQIIESAEILAFWPPHKP*SHGSSS
Trigger: AGAAGATGAACCGTGTGATCAGGGCTTGTGTGGAGG...CCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCTCACGGGCACTGACATaGGTCAGGAAGTCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: PQATIPYIQCSVALQEKSSRALT*VRKSRL
Trigger: CAACCGGGACTTCCTGACTCATGTCAGTGCCCGTGA...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp CATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATTCTTTCAGCAGCCCCTaGGTGATGCTGAAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: HSVQCSTSREIQKVSVPDSFSSP*VMLKAR
Trigger: GCGGGCCTTCAGCATCACTCAGGGGCTGCTGAAAGA...ATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp CAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATGAGAACTGACATCGTGGCCTaGGCAGAGGAGGCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: QCSVALQEKSRKFQFQMRTDIVA*AEEAVF
Trigger: AAAGACCGCCTCCTCTGCTCAGGCCACGATGTCAGT...TCTCATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp CATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATGGACATCTGCATAGCTaGAGCCGCCCACGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HSVQCSTSREIQKVSVPDGHLHS*SRPRRP
Trigger: TGGCCTTCGTGGGCGGCTTCAGCTATGCAGATGTCC...ATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATCTCAGCCCTTGCTGTTaGTGGAAGCGGCTTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHLSPCC*WKRLGR
Trigger: ACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGAG...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000580356.5
CDS-3UTR GCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAATCTGCCAGAGGAGTTTaGAGGGGCCCCACGCACTGC +
Preference number: 4 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKSARGV*RGPTHC
Trigger: GCAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGA...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCGTCAGGGCCCATCTCTaGAGCATCCTCATTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFVRAHL*SILIGV
Trigger: GACCCCAATGAGGATGCTGCAGAGATGGGCCCTGAC...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTCCGGAGAAGAAAATaGTACGTAACCTTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: IDTATEGTSAGRLSSPLRFRRRK*YVTFPV
Trigger: CACGGGGAAGGTTACGTAGCATTTTCTTCTCCGGAA...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGAGCCAAGGTCCTTCATaGCCACCCTTGCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQSQGPS*PPLPPT
Trigger: GGTTGGGGGCAAGGGTGGGCATGAAGGACCTTGGCT...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS-3UTR CCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGTGGAGAAGTTCAGCCTaGGCCCGACCTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQWRSSA*ARPPAA
Trigger: TGCTGCTGGAGGTCGGGCCCAGGCTGAACTTCTCCA...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTCCATCCACGTGGAGCTaGCCCTTGAAGAACCAGTGT +
Preference number: 4 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFPSTWS*PLKNQC
Trigger: ACACTGGTTCTTCAAGGGCCAGCTCCACGTGGATGG...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGCAGAAGCTCCATTACTaGCTTCAATGGCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAEQKLHY*LQWQPP
Trigger: TGGAGGTTGCCATTGAAGCCAGTAATGGAGCTTCTG...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATCAGCTGCCCACCCTTTaGCAGAGCCCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHQLPTL*QSPGHL
Trigger: CAGATGTCCTGGGCTCTGCCAAAGGGTGGGCAGCTG...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314666.11
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CCA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGCATTGATAAAGAGCTaGAGCCAGGGGGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFALIKS*SQGEVV
Trigger: GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGC...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCCAGAAACAGAGCTGCTaGGCCAGCTGTAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFQKQSC*ASCSGS
Trigger: GGAGCCACTACAGCTGGCCCAGCAGCTCTGTTTCTG...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CTTTTCCTTGTCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAACTACGTAACCTGGGATaGAAGGAGGAGGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: LFLVALFSEPHAVSWAEKLRNLG*KEEGSE
Trigger: CTCACTTCCCTCCTCCTTCCATCCCAGGTTACGTAG...TTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGACAAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS-3UTR TCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACTGTTATCACAGAATTTaGGGACGTTGTTGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNCYHRI*GRCWGS
Trigger: CGAACCCCAACAACGTCCTCAAATTCTGTGATAACA...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATCATCCCGGAGGTCAGTaGCCAGAGCAAACACCAGGT +
Preference number: 4 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHHPGGQ*PEQTPG
Trigger: ACCTGGTGTTTGCTCTGGTCACTGACCTCCGGGATG...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000580356.5
CDS-3UTR TCA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCAGCCTGGGAGACATGGTaGAACCCTATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NDEKRERKTSLRAKEAIAAWETW*NPISTK
Trigger: TTTAGTAGAGATAGGGTTTCACCATGTCTCCCAGGC...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCTGCTCGCTATTGGACTaGGCCAAGTCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFCSLLD*AKSKAS
Trigger: GGAGGCCTTTGACTTGGCGCAGTCCAATAGCGAGCA...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTTCCCTGGATTaGACTGCTGTTATCACAGAA +
Preference number: 4 (lower is better)
Translates to: LRPALRQPETLRNFHKQQFLSLD*TAVITE
Trigger: TTCTGTGATAACAGCAGTGCAATCCAGGGAAAGGAA...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGGTTCCCCAAACTTGTTaGCATAGTCAGAAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: NRHSHRRNISRQIIESAEVPQTC*HSQKLH
Trigger: ATGGAGCTTCTGACTATGGCAACAAGTTTGGGGAAC...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATAAAGGTCACAGCAGCTaGCCACCCTTTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHKGHSS*PPFGRA
Trigger: GGCTCTGCCAAAGGGTGGGCAGCTGCTGTGACCTTT...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314666.11
ENST00000546020.2
ENST00000580356.5
CDS-3UTR GCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACGGTGAGGGGCTGATCTaGATACTATTGCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNGEGLI*ILLLNL
Trigger: CAAATTCAGCAATAGTATGCAGATCAGCCCCTCACC...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp AGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACACCGGTATTCCTTACATTCAGTaGAGTGTAGCACTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: RKGSAKHPSEPRRQLHTGIPYIQ*SVALQE
Trigger: CTCTTGAAGTGCTACACTGCACTGAATGTAAGGAAT...ACCGGTGTGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACCAGATACATACCAAATaGCTCACACATGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNQIHTK*LTHAWL
Trigger: AAGCCACGCATGTGTGAGGCATTTGGTATGTATCTG...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp GACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTTCCGGAGAAGAAAATaGTACGTAACCTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: DTATEGTSAGRLSSPLRFFRRRK*YVTWDG
Trigger: TCCATCCCAGGTTACGTAGCATTTTCTTCTCCGGAA...AAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS-3UTR CCA 90 bp CTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCATGTTAATAGAAGTGAAGGACTaGGGACATCTCTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LFSEPHAVSWAEKGHAMLIEVKD*GHLCRC
Trigger: ACACCTGCAGAGATGTCCCCAGTCCTTCACTTCTAT...TAACATGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCGGGAGAAACTCTGGATaGGATGGGGGAAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFGRNSG*DGGSAA
Trigger: AGCAGCACTTCCCCCATCCCATCCAGAGTTTCTCCC...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCGGTCAGAGTATCAAATaGAGGGGGTCGCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: PQATIPYIQCSVALQEKSGQSIK*RGSPCP
Trigger: TGGGCATGGCGACCCCCTCCATTTGATACTCTGACC...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp GACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTAGTCCGCTGAGATTTTaGCATTTTGGTCCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: DTATEGTSAGRLSSPLRFSPLRF*HFGPCL
Trigger: CAGACAAGGACCAAAATGCCAAAATCTCAGCGGACT...AAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp TTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATAGTCCGCTGAGATTTTaGCATTTTGGTCCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: FRALIKSWSQGEVVRVSNSPLRF*HFGPCL
Trigger: CAGACAAGGACCAAAATGCCAAAATCTCAGCGGACT...ATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR TCA 90 bp CATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATGATGGACTCAAACAGTaGGTGCACCAGCTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HSVQCSTSREIQKVSVPDDGLKQ*VHQLLP
Trigger: GGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATC...ATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCGCAATTGCACACCGGTaGTCACTGGGTGTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFAIAHR*SLGVVK
Trigger: CTTCACAACACCCAGTGATCACCGGTGTGCAATTGC...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp CATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATTCTGTCATCCGGTCGTaGAGGGTAGCCAGAGCAATG +
Preference number: 4 (lower is better)
Translates to: HSVQCSTSREIQKVSVPDSVIRS*RVARAM
Trigger: CATTGCTCTGGCTACCCTGCACGACCGGATGACAGA...ATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGGCTCTGGGGCCTCCTTaGTTATGTGGTCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQALGPP*LCGQLP
Trigger: TGGAAGCTGACCACATAAGCAAGGAGGCCCCAGAGC...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTTTATCTCCCTGCACCTaGACAGATGAAGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFLSPCT*TDEAAP
Trigger: TGGAGCTGCTTCATCTGTGCAGGTGCAGGGAGATAA...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR GCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGGGATTCAGAGGGTACTaGTCTGTGGGGTTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQGFRGY*SVGFPS
Trigger: TGACGGGAACCCCACAGAGCAGTACCCTCTGAATCC...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTAGGGGCATACTCCTGTaGGAAAGTTGTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFRGILL*ESCESL
Trigger: CAGAGACTCACAACTTTCCCACAGGAGTATGCCCCT...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGGAAGCCAGCCAGCACTaGTTCCCCAAACTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQEASQH*FPKLVA
Trigger: GGCAACAAGTTTGGGGAACCAGTGCTGGCTGGCTTC...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAATCAGGAAGTCCCGGTTaGGGGACCTCAGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKSGSPG*GTSAEE
Trigger: CTCTTCTGCTGAGGTCCCCCAACCGGGACTTCCTGA...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGGGAGCCAGGGGGAGGTaGTCAGAGTATCAAATGGAG +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQGARGR*SEYQME
Trigger: CTCCATTTGATACTCTGACCACCTCCCCCTGGCTCC...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCCTGGGTGTTGTGAAGTaGGCAACAGAAGCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PQATIPYIQCSVALQEKSLGVVK*ATEAPV
Trigger: AACAGGGGCTTCTGTTGCCCACTTCACAACACCCAG...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAACCTGGCCATTTCTTCTaGCAGGACACTCCCGATCGT +
Preference number: 4 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKPGHFF*QDTPDR
Trigger: ACGATCGGGAGTGTCCTGTCAGAAGAAATGGCCAGG...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp AGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGGGATTATCGAGTCCGCTaGGATTTTGGCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: RRNISRQIIESAEILAFWDYRVR*DFGILV
Trigger: GACCAAAATGCCAAAATCTCAGCGGACTCGATAATC...CCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp CTTTTCCTTGTCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGATTATCGAGTCCGCTaGGATTTTGGCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LFLVALFSEPHAVSWAEKDYRVR*DFGILV
Trigger: GACCAAAATGCCAAAATCTCAGCGGACTCGATAATC...TTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGACAAGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAACAATGAGGTGGTaGGGGGCTGATCTGCATACT +
Preference number: 4 (lower is better)
Translates to: PQATIPYIQCSVALQEKSRTMRW*GADLHT
Trigger: AGTATGCAGATCAGCCCCTCACCACCTCATTGTTCT...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATGACTCAAACAGTGAGTaGACCAGCTTCTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHDSNSE*TSFCPS
Trigger: GGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTC...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000580356.5
CDS-3UTR GCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGGATTCAGAGGGTACTaGTCTGTGGGGTTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKGFRGY*SVGFPS
Trigger: TGACGGGAACCCCACAGAGCAGTACCCTCTGAATCC...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp TTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATATTCCTTACATTCAGTaGAGTGTAGCACTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: FRALIKSWSQGEVVRVSNIPYIQ*SVALQE
Trigger: CTCTTGAAGTGCTACACTGCACTGAATGTAAGGAAT...ATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS-3UTR CCA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCCTGACACGATGTTGGTaGATGTTGGGGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PQATIPYIQCSVALQEKSLTRCW*MLGWRS
Trigger: ACTTCTCCACCCCAACATCCACCAACATCGTGTCAG...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCACACTGACACGATGTTaGTGGATGTTGGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PQATIPYIQCSVALQEKSTLTRC*WMLGWR
Trigger: TCTCCACCCCAACATCCACCAACATCGTGTCAGTGT...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGAGCAGAGGTCCTGCATaGTCACGTCCCATACCTCAA +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQSRGPA*SRPIPQ
Trigger: TTGAGGTATGGGACGTGACCATGCAGGACCTCTGCT...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGGCAGGAAAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKGRKIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCAATTTTCCTGCC...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR GCA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATTCTGGCAGTTTCCCTTaGAGTTTCCTCCGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHSGSFP*SFLRVC
Trigger: ACACACTCGGAGGAAACTGCAAGGGAAACTGCCAGA...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000580356.5
CDS-3UTR GCA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATTTAGGACATTGCCATTaGCACCAGCGCCCTGATCAT +
Preference number: 4 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHLGHCH*HQRPDH
Trigger: ATGATCAGGGCGCTGGTGGCAATGGCAATGTCCTAA...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000580356.5
CDS-3UTR CCA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATAGGATACTGGAAGCTTaGATCCTCCCAGGGCAGATT +
Preference number: 4 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHRILEA*ILPGQI
Trigger: AATCTGCCCTGGGAGGATCCAAGCTTCCAGTATCCT...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000580356.5
CDS-3UTR CCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGATGTTGGTGGATGTTaGGGTGGAGAAGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKDVGGC*GGEVQP
Trigger: AGGCTGAACTTCTCCACCCCAACATCCACCAACATC...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTAGTCAATGCAGTAAGTaGAGAGTAGAATTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFSQCSK*RVEFQH
Trigger: ATGCTGGAATTCTACTCTTCACTTACTGCATTGACT...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAACCTTTGCTGGAGAGATaGATTAGGTTCGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKPLLER*IRFVED
Trigger: ATCTTCCACGAACCTAATTCATCTCTCCAGCAAAGG...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR TCA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAATCTGCATACTATTGCTaGATTTGTCTGCACCCGCTA +
Preference number: 4 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKSAYYC*ICLHPL
Trigger: TAGCGGGTGCAGACAAATTCAGCAATAGTATGCAGA...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR TCA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGAGTCAATGCAGTAAGTaGAGAGTAGAATTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQSQCSK*RVEFQH
Trigger: ATGCTGGAATTCTACTCTTCACTTACTGCATTGACT...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CCA 90 bp CATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATGGGCAGATTGTAACCTaGAATATGCAGATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: HSVQCSTSREIQKVSVPDGQIVT*NMQISK
Trigger: TTTGGAAATCTGCATATTCCAGGTTACAATCTGCCC...ATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS GCA 90 bp AGTGGGAGAGGGATGGACCGCGGCCACCCCACTCTGACTGCCCACTaGACACCGCTCTCTCCCTCACTTCCTCACCATGGCGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: SGRGMDRGHPTLTAH*TPLSPSLPHHGVGP
Trigger: GGGCCCCACGCCATGGTGAGGAAGTGAGGGAGAGAGCGGTGTGCAGTGGGCAGTCAGAGTGGGGTGGCCGCGGTCCATCCCTCTCCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580251.1
CDS-3UTR CAA 90 bp CGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAACAGGCGTTGCTGGAAGCGGCTaGGCCGTGTGGGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: RSSWKLVSSQRARSSPTGVAGSG*AVWGPQ
Trigger: CTGAGGACCCCACACGGCCAAGCCGCTTCCAGCAAC...GCCTGTTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS CCA 90 bp CCACAGGCCCCAGCCCAGTGGCGCGGCACACTGACACGATGTTGGTaGATGTTGGGGTGGAGAAGTTCAGCCTGGGCCCGACCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: PQAPAQWRGTLTRCW*MLGWRSSAWARPPA
Trigger: TGCTGGAGGTCGGGCCCAGGCTGAACTTCTCCACCCCAACATCCACCAACATCGTGTCAGTGTGCCGCGCCACTGGGCTGGGGCCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000584044.5
ENST00000625942.1
CDS CCA 90 bp GGTAGCGCCGGGTGGTCTCCACACGATCCACAGGCCCCAGCCCAGTaGCGCGGCACACTGACACGATGTTGGTGGATGTTGGGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: GSAGWSPHDPQAPAQ*RGTLTRCWWMLGWR
Trigger: TCTCCACCCCAACATCCACCAACATCGTGTCAGTGTGCCGCGCCACTGGGCTGGGGCCTGTGGATCGTGTGGAGACCACCCGGCGCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000584044.5
ENST00000625942.1
CDS-3UTR CAA 90 bp AGCGAGACTCGTAGCGCCCAGACAGGTTGTGGCGTAGCAGAAGGCCTGGCCGGGTCTCAGCCCTTGCTGTaGCTGGAAGCGGCTTGGCCG +
Preference number: 5 (lower is better)
Translates to: SETRSAQTGCGVAEGLAGSQPLL*LEAAWP
Trigger: CGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGAGA...CCCGGCCAGGCCTTCTGCTACGCCACAACCTGTCTGGGCGCTACGAGTCTCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp CTTCAGCACCTGGGCCAGGTCTGGCTCCTGCACCTCCAGCACGAGGCCTGGCTCGAAGGGCCAAGGGAGTaGGGGCGGGATCAGGGAAAT +
Preference number: 5 (lower is better)
Translates to: LQHLGQVWLLHLQHEAWLEGPRE*GRDQGN
Trigger: ATTTCCCTGATCCCGCCCCAACTCCCTTGGCCCTTC...GAGCCAGGCCTCGTGCTGGAGGTGCAGGAGCCAGACCTGGCCCAGGTGCTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS TCA 90 bp GGCCCGGTGGGGATACTGAAGCCGCCAGACCAAGCTTGGGCTAGATaGCGAAACGCTGCACCTGGAGGAGGATCCAGGTCCGCACGCGGT +
Preference number: 5 (lower is better)
Translates to: GPVGILKPPDQAWAR*RNAAPGGGSRSARG
Trigger: ACCGCGTGCGGACCTGGATCCTCCTCCAGGTGCAGCGTTTCGTCATCTAGCCCAAGCTTGGTCTGGCGGCTTCAGTATCCCCACCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581242.3
CDS-3UTR CAA 90 bp AGCGAGACTCGTAGCGCCCAGACAGGTTGTGGCGTAGCAGAAGGCCTGGCCGGGGGGTCCAGCAGGCTCTaGACTGGCTGTTCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: SETRSAQTGCGVAEGLAGGSSRL*TGCSPK
Trigger: CTTGGGAGAACAGCCAGTCAAGAGCCTGCTGGACCC...CCCGGCCAGGCCTTCTGCTACGCCACAACCTGTCTGGGCGCTACGAGTCTCGCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp CAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCAGTGGAGCCTCCCCCAGCCTTCCTaGGGCCTGACCTTCCCCGTG +
Preference number: 5 (lower is better)
Translates to: QRVLLCGVPVIISPVQWSLPQPS*GLTFPV
Trigger: CACGGGGAAGGTCAGGCCCAAGGAAGGCTGGGGGAG...GCTCCACTGCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS TCA 90 bp GGTCTCCACACGATCCACAGGCCCCAGCCCAGTGGCGCGGCACACTaGCACGATGTTGGTGGATGTTGGGGTGGAGAAGTTCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GLHTIHRPQPSGAAH*HDVGGCWGGEVQPG
Trigger: CCCAGGCTGAACTTCTCCACCCCAACATCCACCAACATCGTGTCAGTGTGCCGCGCCACTGGGCTGGGGCCTGTGGATCGTGTGGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000584044.5
ENST00000625942.1
CDS-3UTR CAA 90 bp GACTGCGCCAAGTCAAAGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGACGTGGAGCTGGCCCTaGAAGAACCAGTGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: DCAKSKASTVLGFRCSSWTWSWP*KNQCRL
Trigger: CAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACGT...CCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTGACTTGGCGCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp AGAGGGCTCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTGGAGCAGAGCCAGCAGTaGACAGCCATTACACACGCC +
Preference number: 5 (lower is better)
Translates to: RGLAAPQQAPPEPQPRSLEQSQQ*TAITHA
Trigger: GGCGTGTGTAATGGCTGTCAACTGCTGGCTCTGCTC...CAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGAGCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS TCA 90 bp TCGCAGCTCCCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTaGCACCCGGACCTAGGAAGAGGAACAAATCTCCCACGGGCTAGG +
Preference number: 5 (lower is better)
Translates to: SQLPNRLLQNHSPVH*HPDLGRGTNLPRAR
Trigger: CCTAGCCCGTGGGAGATTTGTTCCTCTTCCTAGGTCCGGGTGTCAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGGGAGCTGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580251.1
CDS-3UTR CAA 90 bp CCTCATTGGGGTCGCCTCCCACCCAGCCGAGCAGAGCCAGCAGTTGACAGCCATCTCTGCAGGTGTCCTTaGCTGGAGAGAGGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: PHWGRLPPSRAEPAVDSHLCRCP*LERGVL
Trigger: AAGGACACCTCTCTCCAGCAAAGGACACCTGCAGAG...ATGGCTGTCAACTGCTGGCTCTGCTCGGCTGGGTGGGAGGCGACCCCAATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp CACCTTATTGGTGAGGTAGCGCTTGCTGGCCACGGCGGGCAGCCTCAGAACCCTCGGCTGTGCTCGCTATaGGACTGCGCCAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: HLIGEVALAGHGGQPQNPRLCSL*DCAKSK
Trigger: CTTTGACTTGGCGCAGTCCAATAGCGAGCACAGCCG...AGGGTTCTGAGGCTGCCCGCCGTGGCCAGCAAGCGCTACCTCACCAATAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp GTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGCTCGCAGCTCCCCAAAACATGTCTCAGCCCTaGCTGTTGCTGGAAGCGGCT +
Preference number: 5 (lower is better)
Translates to: VAGPAGNSSPPRGLAAPQNMSQP*LLLEAA
Trigger: AGCCGCTTCCAGCAACAGCAAGGGCTGAGACATGTT...TTGGGGAGCTGCGAGCCCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp CCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTTCTGCAGCATCCTCATaGGGGTCGCCTCCCACCCAG +
Preference number: 5 (lower is better)
Translates to: PFQGPVSGIDKELEPGGGSAASS*GSPPTQ
Trigger: CTGGGTGGGAGGCGACCCCAATGAGGATGCTGCAGA...ACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS TCA 90 bp AATACGCGGGCACCAAGTAGACACAGCTCGGCCCGGTGGGGATACTaGAGCCGCCAGACCAAGCTTGGGCTAGATGACGAAACGCTGCAC +
Preference number: 5 (lower is better)
Translates to: NTRAPSRHSSARWGY*SRQTKLGLDDETLH
Trigger: GTGCAGCGTTTCGTCATCTAGCCCAAGCTTGGTCTGGCGGCTTCAGTATCCCCACCGGGCCGAGCTGTGTCTACTTGGTGCCCGCGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581242.3
CDS GCA 90 bp GGCATGCTCTCAGGGGAGAAACTCTGGATGGGATGGGGGAAGTGCTaGTCTGTCATCCGGTCGTGCAGGGTAGCCAGAGCAATGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GMLSGEKLWMGWGKC*SVIRSCRVARAMAS
Trigger: GGAAGCCATTGCTCTGGCTACCCTGCACGACCGGATGACAGAGCAGCACTTCCCCCATCCCATCCAGAGTTTCTCCCCTGAGAGCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS GCA 90 bp TCCGGCATGCTCTCAGGGGAGAAACTCTGGATGGGATGGGGGAAGTaGTGCTCTGTCATCCGGTCGTGCAGGGTAGCCAGAGCAATGGCT +
Preference number: 5 (lower is better)
Translates to: SGMLSGEKLWMGWGK*CSVIRSCRVARAMA
Trigger: AGCCATTGCTCTGGCTACCCTGCACGACCGGATGACAGAGCAGCACTTCCCCCATCCCATCCAGAGTTTCTCCCCTGAGAGCATGCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp GACTGCGCCAAGTCAAAGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGCACACTGACACGATGTaGGTGGATGTTGGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: DCAKSKASTVLGFRCSSWHTDTM*VDVGVE
Trigger: CTCCACCCCAACATCCACCAACATCGTGTCAGTGTG...CCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTGACTTGGCGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp GACTGCGCCAAGTCAAAGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGCTAAACATGATGGGCTaGATCCACTCACGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: DCAKSKASTVLGFRCSSWLNMMG*IHSRRW
Trigger: CCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAG...CCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTGACTTGGCGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp GGACATCAACCCTGGGGACAGGCACATCCACCTGTAGCCCGCAATTTCCAGCAAGCAGCTGCCCACCCTTaGGCAGAGCCCAGGACATCT +
Preference number: 5 (lower is better)
Translates to: GHQPWGQAHPPVARNFQQAAAHP*AEPRTS
Trigger: AGATGTCCTGGGCTCTGCCAAAGGGTGGGCAGCTGC...TTGCTGGAAATTGCGGGCTACAGGTGGATGTGCCTGTCCCCAGGGTTGATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACTCTGCAGCATCCTCATaGGGGTCGCCTCCCACCCAG +
Preference number: 5 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNSAASS*GSPPTQ
Trigger: CTGGGTGGGAGGCGACCCCAATGAGGATGCTGCAGA...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp CCTCATTGGGGTCGCCTCCCACCCAGCCGAGCAGAGCCAGCAGTTGACAGCCATCTTCCTTTCCCTGGATaGCACTGTGGACATACCCGT +
Preference number: 5 (lower is better)
Translates to: PHWGRLPPSRAEPAVDSHLPFPG*HCGHTR
Trigger: ACGGGTATGTCCACAGTGCAATCCAGGGAAAGGAAG...ATGGCTGTCAACTGCTGGCTCTGCTCGGCTGGGTGGGAGGCGACCCCAATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS GCA 90 bp CTCTGGCAGTTTCCCTTGCAGTTTCCTCCGAGTGTGTCCAGGGGCTaGCCCCTCATGGCCAGAGGGACGAACATAGAAGTGAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: LWQFPLQFPPSVSRG*PLMARGTNIEVKDW
Trigger: CCAGTCCTTCACTTCTATGTTCGTCCCTCTGGCCATGAGGGGGCAGCCCCTGGACACACTCGGAGGAAACTGCAAGGGAAACTGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000581242.3
ENST00000584044.5
ENST00000585183.5
ENST00000625942.1
CDS CCA 90 bp CCAGTTCACGTTGTAGCACAGTTCAGTCTCGACGCCCTGCAGCTCTaGCAGTTTCCCTTGCAGTTTCCTCCGAGTGTGTCCAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: PVHVVAQFSLDALQL*QFPLQFPPSVSRGC
Trigger: GCAGCCCCTGGACACACTCGGAGGAAACTGCAAGGGAAACTGCCAGAGCTGCAGGGCGTCGAGACTGAACTGTGCTACAACGTGAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000581242.3
ENST00000584044.5
ENST00000585183.5
ENST00000625942.1
CDS-3UTR CAA 90 bp TTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCGTCAGGAAGTCCCGGTaGGGGGACCTCAGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: LGFRGYCSVGFPSSSAQCVRKSR*GDLSRR
Trigger: TCTTCTGCTGAGGTCCCCCAACCGGGACTTCCTGAC...GCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS CCA 90 bp AGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGAAGCGCTTaGTGTAGAAGTCTAGGTCCCAAGAGTCTAAAGCCAGACCGAGAG +
Preference number: 5 (lower is better)
Translates to: RPPQCSGSAVAPGSA*CRSLGPKSLKPDRE
Trigger: CTCTCGGTCTGGCTTTAGACTCTTGGGACCTAGACTTCTACACCAAGCGCTTCCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAAGTTGCTGGAAGCGGCTaGGCCGTGTGGGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LRPALRQPETLRNFHKQQVAGSG*AVWGPQ
Trigger: CTGAGGACCCCACACGGCCAAGCCGCTTCCAGCAAC...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp TCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGCCAGGGCATTCAGGGTaGGGTCCCCAAGCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: SGIDKELEPGGGGQSIKWPGHSG*GPQAGS
Trigger: GCTTCCAGCTTGGGGACCCAACCCTGAATGCCCTGG...CCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp GTGCTCATGATGGACTCAAACAGTGAGTGCACCAGCTTCTGCCCATCCACGTGGTCCTTCCGAGGCATCTaGCCCAGCACCCATTCGAGC +
Preference number: 5 (lower is better)
Translates to: VLMMDSNSECTSFCPSTWSFRGI*PSTHSS
Trigger: GCTCGAATGGGTGCTGGGCAAGATGCCTCGGAAGGA...CCACGTGGATGGGCAGAAGCTGGTGCACTCACTGTTTGAGTCCATCATGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp TCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGATCTGCCAGAGGAGTTaGCAGGGGCCCCACGCACTG +
Preference number: 5 (lower is better)
Translates to: SGIDKELEPGGGGQSIKWICQRS*QGPHAL
Trigger: CAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGAT...CCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp TCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGGCAGCTGCCCACCCTTaGGCAGAGCCCAGGACATCT +
Preference number: 5 (lower is better)
Translates to: SGIDKELEPGGGGQSIKWAAAHP*AEPRTS
Trigger: AGATGTCCTGGGCTCTGCCAAAGGGTGGGCAGCTGC...CCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CAA 90 bp GACTGCGCCAAGTCAAAGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGGGCCTCAATCTGAGCTaGGAGTTCCGGAGAAGAAAA +
Preference number: 5 (lower is better)
Translates to: DCAKSKASTVLGFRCSSWGLNLS*EFRRRK
Trigger: TTTTCTTCTCCGGAACTCCAAGCTCAGATTGAGGCC...CCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCTTTGACTTGGCGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp CAGCGAGGCTCTGCCTGTAGCCGGTCCAGCTGGAAACTCGTCTCCTCCCAGAGGGAGTCCGCTGAGATTTaGGCATTTTGGTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: QRGSACSRSSWKLVSSQRESAEI*AFWSLS
Trigger: AGACAAGGACCAAAATGCCAAAATCTCAGCGGACTC...CCTCTGGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAGCCTCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS CCA 90 bp AGGCCTCCACAGTGCTCGGGTTCCGCTGTAGCTCCTGGAAGCGCTTaGTGTAGAAGTCTAGGTCCCAAGAGTCTAAAGCCAGACCAAGCT +
Preference number: 5 (lower is better)
Translates to: RPPQCSGSAVAPGSA*CRSLGPKSLKPDQA
Trigger: AGCTTGGTCTGGCTTTAGACTCTTGGGACCTAGACTTCTACACCAAGCGCTTCCAGGAGCTACAGCGGAACCCGAGCACTGTGGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS CCA 90 bp ATCTCAGGGATGGGAAGTCTCAGAGGGGTGCAGTCAGGAACATGGTaGGTGTCAGCCAGTTCCATCCAGTTCAGCATCAACCCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: ISGMGSLRGVQSGTW*VSASSIQFSINPGD
Trigger: GTCCCCAGGGTTGATGCTGAACTGGATGGAACTGGCTGACACCCACCATGTTCCTGACTGCACCCCTCTGAGACTTCCCATCCCTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS-3UTR CAA 90 bp CATGGACCCAATGCCCCCACTAAACATGATGGGCTTGATCCACTCACGCCGCTGCGATGTTGGTGGATGTaGGGGTGGAGAAGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: HGPNAPTKHDGLDPLTPLRCWWM*GWRSSA
Trigger: GGCTGAACTTCTCCACCCCAACATCCACCAACATCG...CAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAGTGGGGGCATTGGGTCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAACCAGGGCATTCAGGGTaGGGTCCCCAAGCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: LRPALRQPETLRNFHKQQPGHSG*GPQAGS
Trigger: GCTTCCAGCTTGGGGACCCAACCCTGAATGCCCTGG...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CCCTGGGGACCCATTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCTCAGCAGAAGAGCATTaGATTCCTGGTACTCAGCCC +
Preference number: 5 (lower is better)
Translates to: PWGPIGIQRVLLCGVPVISAEEH*IPGTQP
Trigger: GGGCTGAGTACCAGGAATCAAATGCTCTTCTGCTGA...GATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAATGGGTCCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp TCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCTACCCGTCATGGACCTaGCTTCCTTTCTGGGACCTA +
Preference number: 5 (lower is better)
Translates to: SRVQFRALIKSWSQGEVVYPSWT*LPFWDL
Trigger: TAGGTCCCAGAAAGGAAGCAAGGTCCATGACGGGTA...GACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp CCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTCAGAATTTGAGGACGTaGTTGGGGTTCGAGGATTCC +
Preference number: 5 (lower is better)
Translates to: PFQGPVSGIDKELEPGGGQNLRT*LGFEDS
Trigger: GGAATCCTCGAACCCCAACAACGTCCTCAAATTCTG...ACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp TTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATGGAGGGGGTAAGTGTCCAGCCCAATaGCCCCAGAGCAGAGGTCCT +
Preference number: 5 (lower is better)
Translates to: LIKSWSQGEVVRVSNGGGKCPAQ*PQSRGP
Trigger: AGGACCTCTGCTCTGGGGCAATTGGGCTGGACACTT...ACCCCCTCCATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CAA 90 bp GAGGACGTTGTTGGGGTTCGAGGATTCCTGGGTGCTCATGATGGACTCAAACAGCTCTGGCAGTTTCCCTaGCAGTTTCCTCCGAGTGTG +
Preference number: 5 (lower is better)
Translates to: EDVVGVRGFLGAHDGLKQLWQFP*QFPPSV
Trigger: CACACTCGGAGGAAACTGCAAGGGAAACTGCCAGAG...CTGTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACACGTGGAGCTGGCCCTaGAAGAACCAGTGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNTWSWP*KNQCRL
Trigger: CAGCCGACACTGGTTCTTCAAGGGCCAGCTCCACGT...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp GGGTGTTGTGAAGTGGGCAACAGAAGCCCCTGTTCGGACCTCAGGAGTCCTAACCAGAATTTGAGGACGTaGTTGGGGTTCGAGGATTCC +
Preference number: 5 (lower is better)
Translates to: GCCEVGNRSPCSDLRSPNQNLRT*LGFEDS
Trigger: GGAATCCTCGAACCCCAACAACGTCCTCAAATTCTG...GTTAGGACTCCTGAGGTCCGAACAGGGGCTTCTGTTGCCCACTTCACAACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp GGTGAGGGGCTGATCTGCATACTATTGCTGAATTTGTCTGCACCCGCTAACCCCAACATGTCTCAGCCCTaGCTGTTGCTGGAAGCGGCT +
Preference number: 5 (lower is better)
Translates to: GEGLICILLLNLSAPANPNMSQP*LLLEAA
Trigger: AGCCGCTTCCAGCAACAGCAAGGGCTGAGACATGTT...GGGGTTAGCGGGTGCAGACAAATTCAGCAATAGTATGCAGATCAGCCCCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAAATGCTGAGGGAGTCCTaGCCACCATCCACTGCCACA +
Preference number: 5 (lower is better)
Translates to: VLRPALRQPETLRNFHKQMLRES*PPSTAT
Trigger: TGTGGCAGTGGATGGTGGCAAGGACTCCCTCAGCAT...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CAACTCCAATCCTGTAGACGGGACCTCCAACCTTTACAACTTCCATGCCTGGCTATGCTGAGGGAGTCCTaGCCACCATCCACTGCCACA +
Preference number: 5 (lower is better)
Translates to: QLQSCRRDLQPLQLPCLAMLRES*PPSTAT
Trigger: TGTGGCAGTGGATGGTGGCAAGGACTCCCTCAGCAT...AGCCAGGCATGGAAGTTGTAAAGGTTGGAGGTCCCGTCTACAGGATTGGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAAGAGCCAAGGAGGCAATaGCACACCGGTGATCACTGG +
Preference number: 5 (lower is better)
Translates to: VLRPALRQPETLRNFHKQEPRRQ*HTGDHW
Trigger: CCAGTGATCACCGGTGTGCAATTGCCTCCTTGGCTC...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAACTCTGCAGGTGTCCTTaGCTGGAGAGAGGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LRPALRQPETLRNFHKQQLCRCP*LERGVL
Trigger: AAGGACACCTCTCTCCAGCAAAGGACACCTGCAGAG...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAACGATGTTGGTGGATGTaGGGGTGGAGAAGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LRPALRQPETLRNFHKQQRCWWM*GWRSSA
Trigger: GGCTGAACTTCTCCACCCCAACATCCACCAACATCG...TTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp AGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGGAGCAATTTGAGGACGTTGTaGGGGTTCGAGGATTCCTGG +
Preference number: 5 (lower is better)
Translates to: SQQLPSRVQFRALIKSWSNLRTL*GFEDSW
Trigger: CCAGGAATCCTCGAACCCCAACAACGTCCTCAAATT...GCTCCAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCAGTCAGGAAGTCCCGGTaGGGGGACCTCAGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: NDEKRERKTSLRAKEAIAVRKSR*GDLSRR
Trigger: TCTTCTGCTGAGGTCCCCCAACCGGGACTTCCTGAC...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGAAAGTGTCCAGCCCAATaGCCCCAGAGCAGAGGTCCT +
Preference number: 5 (lower is better)
Translates to: IDTATEGTSAGRLSSPLRKCPAQ*PQSRGP
Trigger: AGGACCTCTGCTCTGGGGCAATTGGGCTGGACACTT...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp ATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGAGAGCAGAGCCAGCAGTaGACAGCCATTACACACGCC +
Preference number: 5 (lower is better)
Translates to: IDTATEGTSAGRLSSPLREQSQQ*TAITHA
Trigger: GGCGTGTGTAATGGCTGTCAACTGCTGGCTCTGCTC...TCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACCTCTGGCAGTTTCCCTaGCAGTTTCCTCCGAGTGTG +
Preference number: 5 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNLWQFP*QFPPSV
Trigger: CACACTCGGAGGAAACTGCAAGGGAAACTGCCAGAG...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACGCCACATCAGCTTCTTaGTCTCCTCAGCACTGGGGA +
Preference number: 5 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNATSAS*SPQHWG
Trigger: TCCCCAGTGCTGAGGAGACAAAGAAGCTGATGTGGC...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGCACACTGACACGATGTaGGTGGATGTTGGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: NRHSHRRNISRQIIESAEHTDTM*VDVGVE
Trigger: CTCCACCCCAACATCCACCAACATCGTGTCAGTGTG...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp TTGGGATTCAGAGGGTACTGCTCTGTGGGGTTCCCGTCATCATCAGCCCAGTGCCTGTTATCACAGAATTaGAGGACGTTGTTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: LGFRGYCSVGFPSSSAQCLLSQN*RTLLGF
Trigger: GAACCCCAACAACGTCCTCAAATTCTGTGATAACAG...GCACTGGGCTGATGATGACGGGAACCCCACAGAGCAGTACCCTCTGAATCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGCTAAACATGATGGGCTaGATCCACTCACGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: NRHSHRRNISRQIIESAELNMMG*IHSRRW
Trigger: CCAGCGGCGTGAGTGGATCAAGCCCATCATGTTTAG...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTTCTGCAGCATCCTCATaGGGGTCGCCTCCCACCCAG +
Preference number: 5 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFSAASS*GSPPTQ
Trigger: CTGGGTGGGAGGCGACCCCAATGAGGATGCTGCAGA...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAAGTCCAGTTTCGGGCATaGATAAAGAGCTGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: VLRPALRQPETLRNFHKQVQFRA*IKSWSQ
Trigger: CTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGAC...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp ACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTAGACCAAGCTCCTGGTaGGCCTTCTCCAGCGCAAGC +
Preference number: 5 (lower is better)
Translates to: TEGTSAGRLSSPLRFWHFRPSSW*AFSSAS
Trigger: GCTTGCGCTGGAGAAGGCCAACCAGGAGCTTGGTCT...AAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCATCTGCCAGAGGAGTTaGCAGGGGCCCCACGCACTG +
Preference number: 5 (lower is better)
Translates to: PQATIPYIQCSVALQEKSICQRS*QGPHAL
Trigger: CAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGAT...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CTTTTCCTTGTCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAAAGTGTCCAGCCCAATaGCCCCAGAGCAGAGGTCCT +
Preference number: 5 (lower is better)
Translates to: LFLVALFSEPHAVSWAEKKCPAQ*PQSRGP
Trigger: AGGACCTCTGCTCTGGGGCAATTGGGCTGGACACTT...TTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGACAAGGAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp AGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTTGGCATTTTGGGAGCCAAGGAGGCAATaGCACACCGGTGATCACTGG +
Preference number: 5 (lower is better)
Translates to: RRNISRQIIESAEILAFWEPRRQ*HTGDHW
Trigger: CCAGTGATCACCGGTGTGCAATTGCCTCCTTGGCTC...CCAAAATGCCAAAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp CATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATTCTCAGCCCTTGCTGTaGCTGGAAGCGGCTTGGCCG +
Preference number: 5 (lower is better)
Translates to: HSVQCSTSREIQKVSVPDSQPLL*LEAAWP
Trigger: CGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGAGA...ATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCGGCTCTGGGGCCTCCTaGCTTATGTGGTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFGSGAS*LMWSAS
Trigger: GGAAGCTGACCACATAAGCAAGGAGGCCCCAGAGCC...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCTCCTTCCGAGGCATCTaGCCCAGCACCCATTCGAGC +
Preference number: 5 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFSFRGI*PSTHSS
Trigger: GCTCGAATGGGTGCTGGGCAAGATGCCTCGGAAGGA...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATGCAGCTGCCCACCCTTaGGCAGAGCCCAGGACATCT +
Preference number: 5 (lower is better)
Translates to: HSVQCSTSREIQKVSVPDAAAHP*AEPRTS
Trigger: AGATGTCCTGGGCTCTGCCAAAGGGTGGGCAGCTGC...ATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp GACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTGGCCTCAATCTGAGCTaGGAGTTCCGGAGAAGAAAA +
Preference number: 5 (lower is better)
Translates to: DTATEGTSAGRLSSPLRFGLNLS*EFRRRK
Trigger: TTTTCTTCTCCGGAACTCCAAGCTCAGATTGAGGCC...AAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp AGAAGAAAATGCTACGTAACCTTCCCCGTGCGCACTCCACACGGGCAGCACGGCTTGGCATTTTGGTCCTaGTCTGTCCAAGATATTTTT +
Preference number: 5 (lower is better)
Translates to: RRKCYVTFPVRTPHGQHGLAFWS*SVQDIF
Trigger: AAAAATATCTTGGACAGACAAGGACCAAAATGCCAA...GCCGTGCTGCCCGTGTGGAGTGCGCACGGGGAAGGTTACGTAGCATTTTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS-3UTR CAA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCCGGCTGTGCTCGCTATaGGACTGCGCCAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: PQATIPYIQCSVALQEKSRLCSL*DCAKSK
Trigger: CTTTGACTTGGCGCAGTCCAATAGCGAGCACAGCCG...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATGGCTCTGGGGCCTCCTaGCTTATGTGGTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHGSGAS*LMWSAS
Trigger: GGAAGCTGACCACATAAGCAAGGAGGCCCCAGAGCC...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000580356.5
CDS-3UTR CAA 90 bp CATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATGGGTCCAGCAGGCTCTaGACTGGCTGTTCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: HSVQCSTSREIQKVSVPDGSSRL*TGCSPK
Trigger: CTTGGGAGAACAGCCAGTCAAGAGCCTGCTGGACCC...ATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp GGCCAGTCAGCAGCTCCCTTCCAGGGTCCAGTTTCGGGCATTGATAAAGAGCTGTTGGCATTTTGGTCCTaGTCTGTCCAAGATATTTTT +
Preference number: 5 (lower is better)
Translates to: GQSAAPFQGPVSGIDKELLAFWS*SVQDIF
Trigger: AAAAATATCTTGGACAGACAAGGACCAAAATGCCAA...CAGCTCTTTATCAATGCCCGAAACTGGACCCTGGAAGGGAGCTGCTGACTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CAA 90 bp GACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGATTTGAGTCCGCTGAGATTTaGGCATTTTGGTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: DTATEGTSAGRLSSPLRFESAEI*AFWSLS
Trigger: AGACAAGGACCAAAATGCCAAAATCTCAGCGGACTC...AAATCTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp CCCTGTTCGGACCTCAGGAGTCCTAACTTTTCCTTGTCGCTCTTTTCTCTGAACGAGTCCGCTGAGATTTaGGCATTTTGGTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: PCSDLRSPNFSLSLFSLNESAEI*AFWSLS
Trigger: AGACAAGGACCAAAATGCCAAAATCTCAGCGGACTC...GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACTCCTGAGGTCCGAACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp GGTGAGGGGCTGATCTGCATACTATTGCTGAATTTGTCTGCACCCGCTAACCCCAGTCCTAACTTTTCCTaGTCGCTCTTTTCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: GEGLICILLLNLSAPANPSPNFS*SLFSLN
Trigger: GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACT...GGGGTTAGCGGGTGCAGACAAATTCAGCAATAGTATGCAGATCAGCCCCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp TTTCGGGCATTGATAAAGAGCTGGAGCCAGGGGGAGGTGGTCAGAGTATCAAATATACTATTGCTGAATTaGTCTGCACCCGCTAACCCC +
Preference number: 5 (lower is better)
Translates to: FRALIKSWSQGEVVRVSNILLLN*SAPANP
Trigger: GGGGTTAGCGGGTGCAGACAAATTCAGCAATAGTAT...ATTTGATACTCTGACCACCTCCCCCTGGCTCCAGCTCTTTATCAATGCCCGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS-3UTR CAA 90 bp TCGCTCTTTTCTCTGAACCACATGCTGTTTCCTGGGCTGAGAAAGGGCATGCCACTGATCTGCATACTATaGCTGAATTTGTCTGCACCC +
Preference number: 5 (lower is better)
Translates to: SLFSLNHMLFPGLRKGMPLICIL*LNLSAP
Trigger: GGGTGCAGACAAATTCAGCAATAGTATGCAGATCAG...TGGCATGCCCTTTCTCAGCCCAGGAAACAGCATGTGGTTCAGAGAAAAGAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp GTTCTGAGGCCAGCCCTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACTGATCTGCATACTATaGCTGAATTTGTCTGCACCC +
Preference number: 5 (lower is better)
Translates to: VLRPALRQPETLRNFHKQLICIL*LNLSAP
Trigger: GGGTGCAGACAAATTCAGCAATAGTATGCAGATCAG...TTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAGGGCTGGCCTCAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp AATAGACACAGCCACAGAAGGAACATCAGCAGGCAGATTATCGAGTCCGCTGAGCTGTTATCACAGAATTaGAGGACGTTGTTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: NRHSHRRNISRQIIESAELLSQN*RTLLGF
Trigger: GAACCCCAACAACGTCCTCAAATTCTGTGATAACAG...CTCAGCGGACTCGATAATCTGCCTGCTGATGTTCCTTCTGTGGCTGTGTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCACTTCCTTTCCCTGGATaGCACTGCTGTTATCACAGA +
Preference number: 5 (lower is better)
Translates to: NDEKRERKTSLRAKEAIALPFPG*HCCYHR
Trigger: TCTGTGATAACAGCAGTGCAATCCAGGGAAAGGAAG...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATGAGCAGAGCCAGCAGTaGACAGCCATTACACACGCC +
Preference number: 5 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHEQSQQ*TAITHA
Trigger: GGCGTGTGTAATGGCTGTCAACTGCTGGCTCTGCTC...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314666.11
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CAA 90 bp CTAAGACAGCCAGAAACGCTGAGAAACTTCCACAAGCAACAATTCCTTACATTCGTCCAGTTTCGGGCATaGATAAAGAGCTGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: LRQPETLRNFHKQQFLTFVQFRA*IKSWSQ
Trigger: CTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGAC...GAATGTAAGGAATTGTTGCTTGTGGAAGTTTCTCAGCGTTTCTGGCTGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATATATTGATAGGGCCATaGAGGGGTTCCGGCATGCTC +
Preference number: 5 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHILIGP*RGSGML
Trigger: GAGCATGCCGGAACCCCTCAATGGCCCTATCAATAT...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATCCCTCACCCAGTATATaGATAGGGCCATTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHPSPSI*IGPLRG
Trigger: ACCCCTCAATGGCCCTATCAATATACTGGGTGAGGG...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CCACAAGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAATTTGAGGACGTTGTaGGGGTTCGAGGATTCCTGG +
Preference number: 5 (lower is better)
Translates to: PQATIPYIQCSVALQEKSNLRTL*GFEDSW
Trigger: CCAGGAATCCTCGAACCCCAACAACGTCCTCAAATT...GGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp CAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGATGAGAGGCCTCAATCTGAGCTaGGAGTTCCGGAGAAGAAAA +
Preference number: 5 (lower is better)
Translates to: QCSVALQEKSRKFQFQMRGLNLS*EFRRRK
Trigger: TTTTCTTCTCCGGAACTCCAAGCTCAGATTGAGGCC...TCTCATCTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp CCTTGTCTGTCCAAGATATTTTTGGAAATAATATGGGGTGCTCCTGAAGGTCATGTCCAGTTTCGGGCATaGATAAAGAGCTGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PCLSKIFLEIIWGAPEGHVQFRA*IKSWSQ
Trigger: CTGGCTCCAGCTCTTTATCAATGCCCGAAACTGGAC...ATGACCTTCAGGAGCACCCCATATTATTTCCAAAAATATCTTGGACAGACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314666.11
ENST00000546020.2
ENST00000580356.5
CDS-3UTR CAA 90 bp AATGATGAGAAAAGGGAGCGCAAAACATCCCTCAGAGCCAAGGAGGCAATTGCAAGTCCTAACTTTTCCTaGTCGCTCTTTTCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: NDEKRERKTSLRAKEAIASPNFS*SLFSLN
Trigger: GTTCAGAGAAAAGAGCGACAAGGAAAAGTTAGGACT...TGCAATTGCCTCCTTGGCTCTGAGGGATGTTTTGCGCTCCCTTTTCTCATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp TACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAGTTTCAGTTCCAGTCAGCAGAAGAGCATTaGATTCCTGGTACTCAGCCC +
Preference number: 5 (lower is better)
Translates to: YIQCSVALQEKSRKFQFQSAEEH*IPGTQP
Trigger: GGGCTGAGTACCAGGAATCAAATGCTCTTCTGCTGA...CTGGAACTGAAACTTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS-3UTR CAA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAAATACTATTGCTGAATTaGTCTGCACCCGCTAACCCC +
Preference number: 5 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKILLLN*SAPANP
Trigger: GGGGTTAGCGGGTGCAGACAAATTCAGCAATAGTAT...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS-3UTR CAA 90 bp AGCAACAATTCCTTACATTCAGTGCAGTGTAGCACTTCAAGAGAAATCCAGAAATTGGCATTTTGGTCCTaGTCTGTCCAAGATATTTTT +
Preference number: 5 (lower is better)
Translates to: SNNSLHSVQCSTSREIQKLAFWS*SVQDIF
Trigger: AAAAATATCTTGGACAGACAAGGACCAAAATGCCAA...TTTCTGGATTTCTCTTGAAGTGCTACACTGCACTGAATGTAAGGAATTGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000546020.2
CDS CCA 72 bp GCACACCGCTCTCTCCCTCACTTCCTCACCATGGCGTaGGGCCCGGCCTCGCCTGTGTGGCCCAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: AHRSLPHFLTMA*GPASPVWPSSR
Trigger: CCTGGAGCTGGGCCACACAGGCGAGGCCGGGCCCCACGCCATGGTGAGGAAGTGAGGGAGAGAGCGGTGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580251.1
CDS GCA 72 bp GGGATGGACCGCGGCCACCCCACTCTGACTGCCCACTaGACACCGCTCTCTCCCTCACTTCCTCACCATGGC +
Preference number: 6 (lower is better)
Translates to: GMDRGHPTLTAH*TPLSPSLPHHG
Trigger: GCCATGGTGAGGAAGTGAGGGAGAGAGCGGTGTGCAGTGGGCAGTCAGAGTGGGGTGGCCGCGGTCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580251.1
CDS CCA 72 bp GAGTCTAAAGCCAGACCGAGAGCCGGTAGCGCCGGGTaGTCTCCACACGATCCACAGGCCCCAGCCCAGTGG +
Preference number: 6 (lower is better)
Translates to: ESKARPRAGSAG*SPHDPQAPAQW
Trigger: CCACTGGGCTGGGGCCTGTGGATCGTGTGGAGACCACCCGGCGCTACCGGCTCTCGGTCTGGCTTTAGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580356.5
CDS CAA 90 bp CGATCCACAGGCCCCAGCCCAGTGGCGCGGCACACTGACACGATGTaGGTGGATGTTGGGGTGGAGAAGTTCAGCCTGGGCCCGACCTCC +
Preference number: 6 (lower is better)
Translates to: RSTGPSPVARHTDTM*VDVGVEKFSLGPTS
Trigger: GGAGGTCGGGCCCAGGCTGAACTTCTCCACCCCAACATCCACCAACATCGTGTCAGTGTGCCGCGCCACTGGGCTGGGGCCTGTGGATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000584044.5
ENST00000625942.1
CDS CCA 72 bp CCAGCCCAGTGGCGCGGCACACTGACACGATGTTGGTaGATGTTGGGGTGGAGAAGTTCAGCCTGGGCCCGA +
Preference number: 6 (lower is better)
Translates to: PAQWRGTLTRCW*MLGWRSSAWAR
Trigger: TCGGGCCCAGGCTGAACTTCTCCACCCCAACATCCACCAACATCGTGTCAGTGTGCCGCGCCACTGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000584044.5
ENST00000625942.1
CDS CCA 72 bp GGGTGGTCTCCACACGATCCACAGGCCCCAGCCCAGTaGCGCGGCACACTGACACGATGTTGGTGGATGTTG +
Preference number: 6 (lower is better)
Translates to: GWSPHDPQAPAQ*RGTLTRCWWML
Trigger: CAACATCCACCAACATCGTGTCAGTGTGCCGCGCCACTGGGCTGGGGCCTGTGGATCGTGTGGAGACCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000584044.5
ENST00000625942.1
CDS CCA 72 bp CGCGGCACACTGACACGATGTTGGTGGATGTTGGGGTaGAGAAGTTCAGCCTGGGCCCGACCTCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: RGTLTRCWWMLG*RSSAWARPPAA
Trigger: TGCTGCTGGAGGTCGGGCCCAGGCTGAACTTCTCCACCCCAACATCCACCAACATCGTGTCAGTGTGCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000584044.5
ENST00000625942.1
CDS TCA 72 bp ACGATCCACAGGCCCCAGCCCAGTGGCGCGGCACACTaGCACGATGTTGGTGGATGTTGGGGTGGAGAAGTT +
Preference number: 6 (lower is better)
Translates to: TIHRPQPSGAAH*HDVGGCWGGEV
Trigger: AACTTCTCCACCCCAACATCCACCAACATCGTGTCAGTGTGCCGCGCCACTGGGCTGGGGCCTGTGGATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000584044.5
ENST00000625942.1
CDS TCA 72 bp GGGATACTGAAGCCGCCAGACCAAGCTTGGGCTAGATaGCGAAACGCTGCACCTGGAGGAGGATCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: GILKPPDQAWAR*RNAAPGGGSRS
Trigger: GGACCTGGATCCTCCTCCAGGTGCAGCGTTTCGTCATCTAGCCCAAGCTTGGTCTGGCGGCTTCAGTATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581242.3
CDS TCA 72 bp GCACCAAGTAGACACAGCTCGGCCCGGTGGGGATACTaGAGCCGCCAGACCAAGCTTGGGCTAGATGACGAA +
Preference number: 6 (lower is better)
Translates to: APSRHSSARWGY*SRQTKLGLDDE
Trigger: TTCGTCATCTAGCCCAAGCTTGGTCTGGCGGCTTCAGTATCCCCACCGGGCCGAGCTGTGTCTACTTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581242.3
CDS GCA 72 bp ATGGGATGGGGGAAGTGCTGCTCTGTCATCCGGTCGTaGAGGGTAGCCAGAGCAATGGCTTCCACCTCAGCT +
Preference number: 6 (lower is better)
Translates to: MGWGKCCSVIRS*RVARAMASTSA
Trigger: AGCTGAGGTGGAAGCCATTGCTCTGGCTACCCTGCACGACCGGATGACAGAGCAGCACTTCCCCCATCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS GCA 72 bp TCAGGGGAGAAACTCTGGATGGGATGGGGGAAGTGCTaGTCTGTCATCCGGTCGTGCAGGGTAGCCAGAGCA +
Preference number: 6 (lower is better)
Translates to: SGEKLWMGWGKC*SVIRSCRVARA
Trigger: TGCTCTGGCTACCCTGCACGACCGGATGACAGAGCAGCACTTCCCCCATCCCATCCAGAGTTTCTCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS GCA 72 bp CTCTCAGGGGAGAAACTCTGGATGGGATGGGGGAAGTaGTGCTCTGTCATCCGGTCGTGCAGGGTAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LSGEKLWMGWGK*CSVIRSCRVAR
Trigger: TCTGGCTACCCTGCACGACCGGATGACAGAGCAGCACTTCCCCCATCCCATCCAGAGTTTCTCCCCTGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS CAA 72 bp GCCTTCTCCAGCGCAAGCCGGCCCTCACCCAGTATATaGATAGGGCCATTGAGGGGTTCCGGCATGCTCTCA +
Preference number: 6 (lower is better)
Translates to: AFSSASRPSPSI*IGPLRGSGMLS
Trigger: TGAGAGCATGCCGGAACCCCTCAATGGCCCTATCAATATACTGGGTGAGGGCCGGCTTGCGCTGGAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS CAA 90 bp TCCTGGTTGGCCTTCTCCAGCGCAAGCCGGCCCTCACCCAGTATATaGATAGGGCCATTGAGGGGTTCCGGCATGCTCTCAGGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: SWLAFSSASRPSPSI*IGPLRGSGMLSGEK
Trigger: TTTCTCCCCTGAGAGCATGCCGGAACCCCTCAATGGCCCTATCAATATACTGGGTGAGGGCCGGCTTGCGCTGGAGAAGGCCAACCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS CAA 90 bp TTCTCCAGCGCAAGCCGGCCCTCACCCAGTATATTGATAGGGCCATaGAGGGGTTCCGGCATGCTCTCAGGGGAGAAACTCTGGATGGGA +
Preference number: 6 (lower is better)
Translates to: FSSASRPSPSILIGP*RGSGMLSGEKLWMG
Trigger: TCCCATCCAGAGTTTCTCCCCTGAGAGCATGCCGGAACCCCTCAATGGCCCTATCAATATACTGGGTGAGGGCCGGCTTGCGCTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS TCA 72 bp CCCAACAGGCTCCTCCAGAACCACAGCCCCGTTCACTaGCACCCGGACCTAGGAAGAGGAACAAATCTCCCA +
Preference number: 6 (lower is better)
Translates to: PNRLLQNHSPVH*HPDLGRGTNLP
Trigger: TGGGAGATTTGTTCCTCTTCCTAGGTCCGGGTGTCAGTGAACGGGGCTGTGGTTCTGGAGGAGCCTGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580251.1
CDS GCA 72 bp TTTCCCTTGCAGTTTCCTCCGAGTGTGTCCAGGGGCTaGCCCCTCATGGCCAGAGGGACGAACATAGAAGTG +
Preference number: 6 (lower is better)
Translates to: FPLQFPPSVSRG*PLMARGTNIEV
Trigger: CACTTCTATGTTCGTCCCTCTGGCCATGAGGGGGCAGCCCCTGGACACACTCGGAGGAAACTGCAAGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000581242.3
ENST00000584044.5
ENST00000585183.5
ENST00000625942.1
CDS CAA 72 bp GCAAGCCGGCCCTCACCCAGTATATTGATAGGGCCATaGAGGGGTTCCGGCATGCTCTCAGGGGAGAAACTC +
Preference number: 6 (lower is better)
Translates to: ASRPSPSILIGP*RGSGMLSGEKL
Trigger: GAGTTTCTCCCCTGAGAGCATGCCGGAACCCCTCAATGGCCCTATCAATATACTGGGTGAGGGCCGGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS CCA 72 bp TGGTGGGAAACCAGGAGCAGGTTAATGGGGGAACTATaGGGCTGTGGGTTCCTGGAGAAGACCCTTGACGGA +
Preference number: 6 (lower is better)
Translates to: WWETRSRLMGEL*GCGFLEKTLDG
Trigger: TCCGTCAAGGGTCTTCTCCAGGAACCCACAGCCCCATAGTTCCCCCATTAACCTGCTCCTGGTTTCCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585183.5
CDS CAA 90 bp CATCATCCAGCAGTAAGGGGCAACCAAACAGCCACATCAGCTTCTTaGTCTCCTCAGCACTGGGGAGGGCCTCAGCTGTCCAGTTCACGT +
Preference number: 6 (lower is better)
Translates to: HHPAVRGNQTATSAS*SPQHWGGPQLSSSR
Trigger: ACGTGAACTGGACAGCTGAGGCCCTCCCCAGTGCTGAGGAGACAAAGAAGCTGATGTGGCTGTTTGGTTGCCCCTTACTGCTGGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000581242.3
ENST00000584044.5
ENST00000585183.5
ENST00000625942.1
CDS CCA 72 bp CAGTGCTCGGGTTCCGCTGTAGCTCCTGGAAGCGCTTaGTGTAGAAGTCTAGGTCCCAAGAGTCTAAAGCCA +
Preference number: 6 (lower is better)
Translates to: QCSGSAVAPGSA*CRSLGPKSLKP
Trigger: TGGCTTTAGACTCTTGGGACCTAGACTTCTACACCAAGCGCTTCCAGGAGCTACAGCGGAACCCGAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314666.11
ENST00000580356.5
CDS TCA 72 bp CGTCCACCAGCACTATCTGGAAGCGGCTGGTGTAAATaGTGGCTCCAGCTGGGTCACTCAGCTCTTTTAGGA +
Preference number: 6 (lower is better)
Translates to: RPPALSGSGWCK*WLQLGHSALLG
Trigger: TCCTAAAAGAGCTGAGTGACCCAGCTGGAGCCATCATTTACACCAGCCGCTTCCAGATAGTGCTGGTGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583059.1
CDS CCA 72 bp ATGGGAAGTCTCAGAGGGGTGCAGTCAGGAACATGGTaGGTGTCAGCCAGTTCCATCCAGTTCAGCATCAAC +
Preference number: 6 (lower is better)
Translates to: MGSLRGVQSGTW*VSASSIQFSIN
Trigger: GTTGATGCTGAACTGGATGGAACTGGCTGACACCCACCATGTTCCTGACTGCACCCCTCTGAGACTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578979.5
CDS GCA 72 bp GGCCTCAATCTGAGCTTGGAGTTCCGGAGAAGAAAATaGTACGTAACCTGGGATGGAAGGAGGAGGGAAGTG +
Preference number: 6 (lower is better)
Translates to: GLNLSLEFRRRK*YVTWDGRRREV
Trigger: CACTTCCCTCCTCCTTCCATCCCAGGTTACGTAGCATTTTCTTCTCCGGAACTCCAAGCTCAGATTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546020.2
CDS CAA 90 bp ACGAACATAGAAGTGAAGGACTGGGGACATCTCTGCAGGTGTCCTTaGCTGGAGAGAGGTGTCCTTTGCTGGAGAGATGTGTCCTTTGCT +
Preference number: 6 (lower is better)
Translates to: TNIEVKDWGHLCRCP*LERGVLCWRDVSFA
Trigger: AGCAAAGGACACATCTCTCCAGCAAAGGACACCTCTCTCCAGCAAAGGACACCTGCAGAGATGTCCCCAGTCCTTCACTTCTATGTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000581242.3
ENST00000584044.5
ENST00000585183.5
CDS TCA 72 bp CCTTTCCCTGGATTGCACTGCTGTTATCACAGAATTTaGGGACGTTGTTGGGGTTCGAGGATTCCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: PFPGLHCCYHRI*GRCWGSRIPGC
Trigger: GCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGTGCAATCCAGGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS GCA 72 bp CTCTGCAGGTGTCCTTTGCTGGAGAGAGGTGTCCTTTaGTGGAGAGATGTGTCCTTTGCTGGAGAGATGAAT +
Preference number: 6 (lower is better)
Translates to: LCRCPLLERGVL*WRDVSFAGEMN
Trigger: ATTCATCTCTCCAGCAAAGGACACATCTCTCCAGCAAAGGACACCTCTCTCCAGCAAAGGACACCTGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314666.11
ENST00000580356.5
ENST00000581242.3
ENST00000584044.5
ENST00000585183.5
CDS CAA 72 bp TCCTTTCCCTGGATTGCACTGCTGTTATCACAGAATTaGAGGACGTTGTTGGGGTTCGAGGATTCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: SFPWIALLLSQN*RTLLGFEDSWV
Trigger: CACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGTGCAATCCAGGGAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS CAA 90 bp TCCTTTCCCTGGATTGCACTGCTGTTATCACAGAATTTGAGGACGTaGTTGGGGTTCGAGGATTCCTGGGTGCTCATGATGGACTCAAAC +
Preference number: 6 (lower is better)
Translates to: SFPWIALLLSQNLRT*LGFEDSWVLMMDSN
Trigger: GTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGTGCAATCCAGGGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS CAA 72 bp ATTGCACTGCTGTTATCACAGAATTTGAGGACGTTGTaGGGGTTCGAGGATTCCTGGGTGCTCATGATGGAC +
Preference number: 6 (lower is better)
Translates to: IALLLSQNLRTL*GFEDSWVLMMD
Trigger: GTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS CAA 72 bp TGGATTGCACTGCTGTTATCACAGAATTTGAGGACGTaGTTGGGGTTCGAGGATTCCTGGGTGCTCATGATG +
Preference number: 6 (lower is better)
Translates to: WIALLLSQNLRT*LGFEDSWVLMM
Trigger: CATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGTGCAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11
CDS CAA 90 bp TTTCCCTGGATTGCACTGCTGTTATCACAGAATTTGAGGACGTTGTaGGGGTTCGAGGATTCCTGGGTGCTCATGATGGACTCAAACAGT +
Preference number: 6 (lower is better)
Translates to: FPWIALLLSQNLRTL*GFEDSWVLMMDSNS
Trigger: ACTGTTTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAACAACGTCCTCAAATTCTGTGATAACAGCAGTGCAATCCAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314666.11