RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PEX26 (Homo sapiens)

Ensembl gene IDs: ENSG00000215193

Ensembl transcript IDs: ENST00000329627.11, ENST00000399744.8, ENST00000428061.2

Found 1181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCATTTCCCCAGGGGCGCCTGTGGATGTGTCGCTCTGTCGCTCTaGTTCTGTGGCCACGGACGTGAGGAGCAGAGAGGCTGTGGTGCG +
Preference number: 1 (lower is better)
Translates to: SHFPRGACGCVALSL*FCGHGREEQRGCGA
Trigger: CGCACCACAGCCTCTCTGCTCCTCACGTCCGTGGCCACAGAAGCAGAGCGACAGAGCGACACATCCACAGGCGCCCCTGGGGAAATGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp TTTCCGTGCTGGGAGGGAGGAAAGCAGAGGACGGCACAGGGAGGCTaGGAGGGAGGAAGGAAAGCAGACGACGGCACAGGGAGGTGCCCT +
Preference number: 1 (lower is better)
Translates to: FPCWEGGKQRTAQGG*EGGRKADDGTGRCP
Trigger: AGGGCACCTCCCTGTGCCGTCGTCTGCTTTCCTTCCTCCCTCCCAGCCTCCCTGTGCCGTCCTCTGCTTTCCTCCCTCCCAGCACGGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp AGGGCACCCAGGCAGCAAGACACAGTGCACTCCGCGAGATTAGGCTaGTCCCATTTCCCCAGGGGCGCCTGTGGATGTGTCGCTCTGTCG +
Preference number: 1 (lower is better)
Translates to: RAPRQQDTVHSARLG*SHFPRGACGCVALS
Trigger: CGACAGAGCGACACATCCACAGGCGCCCCTGGGGAAATGGGACCAGCCTAATCTCGCGGAGTGCACTGTGTCTTGCTGCCTGGGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CCCCAGGCACTATCTGTCCTGCTTGCACCCACCTCCACCCAGGGCTaGCCAACAATAGCCTGTTTCCTCTCCATTCCACCCCTCTCCCCC +
Preference number: 1 (lower is better)
Translates to: PQALSVLLAPTSTQG*PTIACFLSIPPLSP
Trigger: GGGGGAGAGGGGTGGAATGGAGAGGAAACAGGCTATTGTTGGCCAGCCCTGGGTGGAGGTGGGTGCAAGCAGGACAGATAGTGCCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp CCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTAGGGTaGAAAGGAGAGGGCACCCAGGCAGCAAGACACAGTGCACTCCGC +
Preference number: 1 (lower is better)
Translates to: PALFPHHLPRPAEVG*KGEGTQAARHSALR
Trigger: GCGGAGTGCACTGTGTCTTGCTGCCTGGGTGCCCTCTCCTTTGCACCCTACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp TGGTCATCCGGGGCACTGTTCTGGAGGTGCTGTGCCTGCTGGTCCTaGTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTAGGGTG +
Preference number: 1 (lower is better)
Translates to: WSSGALFWRCCACWS*FVSTSSTATSRSRV
Trigger: CACCCTACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACAGCACCTCCAGAACAGTGCCCCGGATGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp TTCAAGGGGCCTCTGGTCATCCGGGGCACTGTTCTGGAGGTGCTGTaGCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAG +
Preference number: 1 (lower is better)
Translates to: FKGPLVIRGTVLEVL*LLVLLCFHIIYRDQ
Trigger: CTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACAGCACCTCCAGAACAGTGCCCCGGATGACCAGAGGCCCCTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp CCATCTTCACCTGCAGTTGTCCGGCCAACATGGCCCCTTCCCGCCTaGCCTTTCCTAACCACCTCCACTCTCTCTAGTGAAGACGCTGAG +
Preference number: 1 (lower is better)
Translates to: PSSPAVVRPTWPLPA*PFLTTSTLSSEDAE
Trigger: CTCAGCGTCTTCACTAGAGAGAGTGGAGGTGGTTAGGAAAGGGCAGGCGGGAAGGGGCCATGTTGGCCGGACAACTGCAGGTGAAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CACAGAGGCCAAGGGGAGCGAGCTGTAGCTGTGATGGTGGGCAGCTaGAAGGCCGCACATATAATCAACAGGGGACCCACATCAAAGGGG +
Preference number: 1 (lower is better)
Translates to: HRGQGERAVAVMVGS*KAAHIINRGPTSKG
Trigger: CCCCTTTGATGTGGGTCCCCTGTTGATTATATGTGCGGCCTTCCAGCTGCCCACCATCACAGCTACAGCTCGCTCCCCTTGGCCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp TTGGTGAGTGGGCCTTGGACTGTACTTCACAATCCCATCTTCACCTaGAGTTGTCCGGCCAACATGGCCCCTTCCCGCCTGCCCTTTCCT +
Preference number: 1 (lower is better)
Translates to: LVSGPWTVLHNPIFT*SCPANMAPSRLPFP
Trigger: AGGAAAGGGCAGGCGGGAAGGGGCCATGTTGGCCGGACAACTGCAGGTGAAGATGGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp TATGAAACAGGTCCCGGGACACAGGGAGGGGCAGAAAGAATTCTTTaGGTAAGCCTGGAAGGTGGAGGGGCTCACCAGGCCAAGAGCAGG +
Preference number: 1 (lower is better)
Translates to: YETGPGTQGGAERIL*VSLEGGGAHQAKSR
Trigger: CCTGCTCTTGGCCTGGTGAGCCCCTCCACCTTCCAGGCTTACTCAAAGAATTCTTTCTGCCCCTCCCTGTGTCCCGGGACCTGTTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp AACTCACCTCCTGTAAACAGGAGGAAAGGCCAGCCTGTGGCCTCGTaGCATCCAAGGCTCTGTCACAGATGGGTAACCACCTTCCTCCGC +
Preference number: 1 (lower is better)
Translates to: NSPPVNRRKGQPVAS*HPRLCHRWVTTFLR
Trigger: GCGGAGGAAGGTGGTTACCCATCTGTGACAGAGCCTTGGATGTCACGAGGCCACAGGCTGGCCTTTCCTCCTGTTTACAGGAGGTGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp TATTTTGGGCATCAACACCAAGGACACAGTGCAGGGCAGCCTGCTTaGCCTCTGGGTAGAGAAAGGCCAGCCCCTGCAGAAAGCCCTTCT +
Preference number: 1 (lower is better)
Translates to: YFGHQHQGHSAGQPA*PLGRERPAPAESPS
Trigger: AGAAGGGCTTTCTGCAGGGGCTGGCCTTTCTCTACCCAGAGGCCAAGCAGGCTGCCCTGCACTGTGTCCTTGGTGTTGATGCCCAAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CTGTACTTCACAATCCCATCTTCACCTGCAGTTGTCCGGCCAACATaGCCCCTTCCCGCCTGCCCTTTCCTAACCACCTCCACTCTCTCT +
Preference number: 1 (lower is better)
Translates to: LYFTIPSSPAVVRPT*PLPACPFLTTSTLS
Trigger: AGAGAGAGTGGAGGTGGTTAGGAAAGGGCAGGCGGGAAGGGGCCATGTTGGCCGGACAACTGCAGGTGAAGATGGGATTGTGAAGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp GTAGTCAACCCGGTGGTTCTGAAAACCACACCCCAGCCTGAACAGTaGGAAGGCTCCTGCAGCTTCAAGCGCATGGCAAGACCATGGGAA +
Preference number: 1 (lower is better)
Translates to: VVNPVVLKTTPQPEQ*EGSCSFKRMARPWE
Trigger: TTCCCATGGTCTTGCCATGCGCTTGAAGCTGCAGGAGCCTTCTCACTGTTCAGGCTGGGGTGTGGTTTTCAGAACCACCGGGTTGACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CCACCTTCTAGATGTAGAAAGAAACTGAACGTCCAGAGTGTGAACTaGCCTGCTTGTATCTCCCCTCGGCGGCAGTGGTGGTTGCCAGCC +
Preference number: 1 (lower is better)
Translates to: PPSRCRKKLNVQSVN*PACISPRRQWWLPA
Trigger: GGCTGGCAACCACCACTGCCGCCGAGGGGAGATACAAGCAGGCCAGTTCACACTCTGGACGTTCAGTTTCTTTCTACATCTAGAAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp ATACTTGCTGTTTTATCAAGAGGCCTAGAGGTGGCAAACAATGTCTaGATCCGTACACCACCGCTGGAGGAATGCAGAGGCGGGCGGGGG +
Preference number: 1 (lower is better)
Translates to: ILAVLSRGLEVANNV*IRTPPLEECRGGRG
Trigger: CCCCCGCCCGCCTCTGCATTCCTCCAGCGGTGGTGTACGGATCCAGACATTGTTTGCCACCTCTAGGCCTCTTGATAAAACAGCAAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp CTCTCTAGTGAAGACGCTGAGCTCGCAGCCATGCTGGTTGCACACTaGCATTTTCTACAGGTTCTCAAGTGCATGGGCTGCCAAGAGGGT +
Preference number: 1 (lower is better)
Translates to: LSSEDAELAAMLVAH*HFLQVLKCMGCQEG
Trigger: ACCCTCTTGGCAGCCCATGCACTTGAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCGAGCTCAGCGTCTTCACTAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CCACCTCCACTCTCTCTAGTGAAGACGCTGAGCTCGCAGCCATGCTaGTTGCACACTGCCATTTTCTACAGGTTCTCAAGTGCATGGGCT +
Preference number: 1 (lower is better)
Translates to: PPPLSLVKTLSSQPC*LHTAIFYRFSSAWA
Trigger: AGCCCATGCACTTGAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCGAGCTCAGCGTCTTCACTAGAGAGAGTGGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp ATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGAGTGGGCCTTaGACTGTACTTCACAATCCCATCTTCACCTGCAGTTGTCCGGCC +
Preference number: 1 (lower is better)
Translates to: IPTPHIWIQPLVSGP*TVLHNPIFTCSCPA
Trigger: GGCCGGACAACTGCAGGTGAAGATGGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp CTGGGTAGAGAAAGGCCAGCCCCTGCAGAAAGCCCTTCTTCATCCTaGCAGCACAGCAGTGCTCTACGCTTCCTTGCACAGAAACTCATA +
Preference number: 1 (lower is better)
Translates to: LGRERPAPAESPSSS*QHSSALRFLAQKLI
Trigger: TATGAGTTTCTGTGCAAGGAAGCGTAGAGCACTGCTGTGCTGTCAGGATGAAGAAGGGCTTTCTGCAGGGGCTGGCCTTTCTCTACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp CTTGGCAGAGAAGATACAGAGGTACGAAGAAGGTCAAGCGAAGACTaGGGCAGGGATTGGAGTGATGCTGTCGCAGGCCAGGGAACACTT +
Preference number: 1 (lower is better)
Translates to: LGREDTEVRRRSSED*GRDWSDAVAGQGTL
Trigger: AAGTGTTCCCTGGCCTGCGACAGCATCACTCCAATCCCTGCCTCAGTCTTCGCTTGACCTTCTTCGTACCTCTGTATCTTCTCTGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp CTCCTGCAGCTTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTaGTACAGAATTAGATCAGCTCTGGGGAGCACAGTGCAGGCAAGA +
Preference number: 1 (lower is better)
Translates to: LLQLQAHGKTMGTAY*YRIRSALGSTVQAR
Trigger: TCTTGCCTGCACTGTGCTCCCCAGAGCTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAAGCTGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp CCGCCAGGCTTTGTCATTGCTGGTACATCTGAGAAGAACACCTCCTaGTCTTTCTCTGGAGGGAGCTGGGCGACGATACTACTAAACAGA +
Preference number: 1 (lower is better)
Translates to: PPGFVIAGTSEKNTS*SFSGGSWATILLNR
Trigger: TCTGTTTAGTAGTATCGTCGCCCAGCTCCCTCCAGAGAAAGAGCAGGAGGTGTTCTTCTCAGATGTACCAGCAATGACAAAGCCTGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp GCAGAGGCACTGAGCGTAACAGAGCAAGACTTGGCCAGGACAACCTaGAAAATTGAGCTGAAGACCAAGAGGCACCAGGCAAGATCACTT +
Preference number: 1 (lower is better)
Translates to: AEALSVTEQDLARTT*KIELKTKRHQARSL
Trigger: AAGTGATCTTGCCTGGTGCCTCTTGGTCTTCAGCTCAATTTTCCAGGTTGTCCTGGCCAAGTCTTGCTCTGTTACGCTCAGTGCCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp ACTGAGCGTAACAGAGCAAGACTTGGCCAGGACAACCTGGAAAATTaGGCTGAAGACCAAGAGGCACCAGGCAAGATCACTTTACCCAGC +
Preference number: 1 (lower is better)
Translates to: TERNRARLGQDNLEN*AEDQEAPGKITLPS
Trigger: GCTGGGTAAAGTGATCTTGCCTGGTGCCTCTTGGTCTTCAGCTCAATTTTCCAGGTTGTCCTGGCCAAGTCTTGCTCTGTTACGCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp GCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCTCTaGGGAGCACAGTGCAGGCAAGAAGAGGCCCTCTCAGATCTACTC +
Preference number: 1 (lower is better)
Translates to: ARPWEQPIDTELDQL*GAQCRQEEALSDLL
Trigger: GAGTAGATCTGAGAGGGCCTCTTCTTGCCTGCACTGTGCTCCCCAGAGCTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp TGGAGGGATAAACAGACTGGCAAGGGTTGCCTCTGGGCAAGAAACTaGGGAATAGAGAGCGGGAGTAGAAAGACTGTATTAGCTGGGTGT +
Preference number: 1 (lower is better)
Translates to: WRDKQTGKGCLWARN*GIESGSRKTVLAGC
Trigger: ACACCCAGCTAATACAGTCTTTCTACTCCCGCTCTCTATTCCCCAGTTTCTTGCCCAGAGGCAACCCTTGCCAGTCTGTTTATCCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp TCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGAGTaGGCCTTGGACTGTACTTCACAATCCCATCTTCACCTGCAGTTG +
Preference number: 1 (lower is better)
Translates to: SQNPNPTYLDPALGE*ALDCTSQSHLHLQL
Trigger: CAACTGCAGGTGAAGATGGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CTGCAGCAGCCGCAATCAAGAGATCACCAAAGAGGAGGTGAATCATaGGACAAATTCCCCTGGGAGGGGTGGAGCTTTAAACCAACATCA +
Preference number: 1 (lower is better)
Translates to: LQQPQSRDHQRGGES*DKFPWEGWSFKPTS
Trigger: TGATGTTGGTTTAAAGCTCCACCCCTCCCAGGGGAATTTGTCCCATGATTCACCTCCTCTTTGGTGATCTCTTGATTGCGGCTGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CACCAAAGAGGAGGTGAATCATGGGACAAATTCCCCTGGGAGGGGTaGAGCTTTAAACCAACATCAGGCAGATGCAAAGAACTCAGCAGA +
Preference number: 1 (lower is better)
Translates to: HQRGGESWDKFPWEG*SFKPTSGRCKELSR
Trigger: TCTGCTGAGTTCTTTGCATCTGCCTGATGTTGGTTTAAAGCTCCACCCCTCCCAGGGGAATTTGTCCCATGATTCACCTCCTCTTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp GAGGATGAGACACAAGAAAGATCTCTTCATTTCCAGGCACCCCATTaGTGGGGTGAGCCCATGAAGTCCAGAGAGCAAACGATATCTTAC +
Preference number: 1 (lower is better)
Translates to: EDETQERSLHFQAPH*WGEPMKSREQTISY
Trigger: GTAAGATATCGTTTGCTCTCTGGACTTCATGGGCTCACCCCAGCAATGGGGTGCCTGGAAATGAAGAGATCTTTCTTGTGTCTCATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp TGGCCACTGGATCACAAACAAATTGGCTCGCCTTTAAGGTTTACATaGCTGCAGCAGCCGCAATCAAGAGATCACCAAAGAGGAGGTGAA +
Preference number: 1 (lower is better)
Translates to: WPLDHKQIGSPLRFT*LQQPQSRDHQRGGE
Trigger: TTCACCTCCTCTTTGGTGATCTCTTGATTGCGGCTGCTGCAGCCATGTAAACCTTAAAGGCGAGCCAATTTGTTTGTGATCCAGTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CTATGCTTCAGAGAGTCTGGCTCCAGAGCAGAGCTCAACTGGATCTaGAAGGGCAAACCTTTCATAGAGAGGCTTGTCCTTGTTCTCTTA +
Preference number: 1 (lower is better)
Translates to: LCFRESGSRAELNWI*KGKPFIERLVLVLL
Trigger: TAAGAGAACAAGGACAAGCCTCTCTATGAAAGGTTTGCCCTTCCAGATCCAGTTGAGCTCTGCTCTGGAGCCAGACTCTCTGAAGCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp CAACAGAACATAACTAGGACAATGGGACACAGAAAGGGAAGAACCTaGAATGGTGTGTACCAAGGAGGCAAGGATACAGGCAGAACCTGG +
Preference number: 1 (lower is better)
Translates to: QQNITRTMGHRKGRT*NGVYQGGKDTGRTW
Trigger: CCAGGTTCTGCCTGTATCCTTGCCTCCTTGGTACACACCATTTCAGGTTCTTCCCTTTCTGTGTCCCATTGTCCTAGTTATGTTCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp GCACAGAAACTCATAAGATGCTTGTGGCTGGTGAGAAAACAACACTaGAACATTTCAGCTCCTCAAATGCTAAGGCCTCGGTGCCACCTC +
Preference number: 1 (lower is better)
Translates to: AQKLIRCLWLVRKQH*NISAPQMLRPRCHL
Trigger: GAGGTGGCACCGAGGCCTTAGCATTTGAGGAGCTGAAATGTTTCAGTGTTGTTTTCTCACCAGCCACAAGCATCTTATGAGTTTCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp TCTGTGACCCCATCACGCAACGGAATGACACACAGCTATGAAGAATaGGGCTGCTCCACATATGCTGGGACTGAGAAAGGTTTTTGTGTT +
Preference number: 1 (lower is better)
Translates to: SVTPSRNGMTHSYEE*GCSTYAGTEKGFCV
Trigger: AACACAAAAACCTTTCTCAGTCCCAGCATATGTGGAGCAGCCTCATTCTTCATAGCTGTGTGTCATTCCGTTGCGTGATGGGGTCACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp AATTTTACCAGCTCCCCAGCTTTCCAGAGAAAGCAGCCCATTCTTTaGGACCCAGCTAAGTCCACTGGTAACCAAGAGCATGGCTTATCT +
Preference number: 1 (lower is better)
Translates to: NFTSSPAFQRKQPIL*DPAKSTGNQEHGLS
Trigger: AGATAAGCCATGCTCTTGGTTACCAGTGGACTTAGCTGGGTCTCAAAGAATGGGCTGCTTTCTCTGGAAAGCTGGGGAGCTGGTAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp ATGTTTGTGTCCATCAAGCCACCTCTTCATCCCACATACACACCCTaGCCAGCCTCTAGTAATTGTCATTCTACTCTCTACCTCCATGAG +
Preference number: 1 (lower is better)
Translates to: MFVSIKPPLHPTYTP*PASSNCHSTLYLHE
Trigger: CTCATGGAGGTAGAGAGTAGAATGACAATTACTAGAGGCTGGGCAGGGTGTGTATGTGGGATGAAGAGGTGGCTTGATGGACACAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp TCAAGAGATCACCAAAGAGGAGGTGAATCATGGGACAAATTCCCCTaGGAGGGGTGGAGCTTTAAACCAACATCAGGCAGATGCAAAGAA +
Preference number: 1 (lower is better)
Translates to: SRDHQRGGESWDKFP*EGWSFKPTSGRCKE
Trigger: TTCTTTGCATCTGCCTGATGTTGGTTTAAAGCTCCACCCCTCCCAGGGGAATTTGTCCCATGATTCACCTCCTCTTTGGTGATCTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp GATGAGACACAAGAAAGATCTCTTCATTTCCAGGCACCCCATTGCTaGGGTGAGCCCATGAAGTCCAGAGAGCAAACGATATCTTACCAT +
Preference number: 1 (lower is better)
Translates to: DETQERSLHFQAPHC*GEPMKSREQTISYH
Trigger: ATGGTAAGATATCGTTTGCTCTCTGGACTTCATGGGCTCACCCCAGCAATGGGGTGCCTGGAAATGAAGAGATCTTTCTTGTGTCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp TCACTTCACCAGGCTTTTTCTGAACTTCCAGCTCCATTAACATCCTaGCCTGAAGAACCAACCCCTTGCCTTCACCAAGAAGATGGAATG +
Preference number: 1 (lower is better)
Translates to: SLHQAFSELPAPLTS*PEEPTPCLHQEDGM
Trigger: CATTCCATCTTCTTGGTGAAGGCAAGGGGTTGGTTCTTCAGGTCAGGATGTTAATGGAGCTGGAAGTTCAGAAAAAGCCTGGTGAAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp TTGCATGCTTCAGAACCCTGTAGAAACAACCAGCAAATCCACTGTTaGTACGCAATTACCCCTCTTGGATGCATCTGCAACAAGCACTCC +
Preference number: 1 (lower is better)
Translates to: LHASEPCRNNQQIHC*YAITPLGCICNKHS
Trigger: GGAGTGCTTGTTGCAGATGCATCCAAGAGGGGTAATTGCGTATCAACAGTGGATTTGCTGGTTGTTTCTACAGGGTTCTGAAGCATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp GACACAAGAAAGATCTCTTCATTTCCAGGCACCCCATTGCTGGGGTaGGCCCATGAAGTCCAGAGAGCAAACGATATCTTACCATTAGAT +
Preference number: 1 (lower is better)
Translates to: DTRKISSFPGTPLLG*AHEVQRANDILPLD
Trigger: ATCTAATGGTAAGATATCGTTTGCTCTCTGGACTTCATGGGCTCACCCCAGCAATGGGGTGCCTGGAAATGAAGAGATCTTTCTTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CTCAGATGCTGCAGGGGATTAAGGGAAGTTGAGGGTGAACCATTTTaGCCACTGGATCACAAACAAATTGGCTCGCCTTTAAGGTTTACA +
Preference number: 1 (lower is better)
Translates to: LRCCRGLREVEGEPF*PLDHKQIGSPLRFT
Trigger: TGTAAACCTTAAAGGCGAGCCAATTTGTTTGTGATCCAGTGGCCAAAATGGTTCACCCTCAACTTCCCTTAATCCCCTGCAGCATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp GCAGCCATGCTGGTTGCACACTGCCATTTTCTACAGGTTCTCAAGTaGATGGGCTGCCAAGAGGGTTGGGTGTTTACATTTATTTTTAAT +
Preference number: 1 (lower is better)
Translates to: AAMLVAHCHFLQVLK*MGCQEGWVFTFIFN
Trigger: ATTAAAAATAAATGTAAACACCCAACCCTCTTGGCAGCCCATGCACTTGAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCATGGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp AAACAAGGAAGGAATCTTGCCTACAGCCTTCAGAGGCAGAGGCTTTaGCTGACTTCTGGCCTTCAGAGCTGTGAGATAATAAATTTCTGT +
Preference number: 1 (lower is better)
Translates to: KQGRNLAYSLQRQRL*LTSGLQSCEIINFC
Trigger: ACAGAAATTTATTATCTCACAGCTCTGAAGGCCAGAAGTCAGCCAAAGCCTCTGCCTCTGAAGGCTGTAGGCAAGATTCCTTCCTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp AAAGATCTCTTCATTTCCAGGCACCCCATTGCTGGGGTGAGCCCATaGAGTCCAGAGAGCAAACGATATCTTACCATTAGATTATCTAGA +
Preference number: 1 (lower is better)
Translates to: KDLFISRHPIAGVSP*SPESKRYLTIRLSR
Trigger: TCTAGATAATCTAATGGTAAGATATCGTTTGCTCTCTGGACTTCATGGGCTCACCCCAGCAATGGGGTGCCTGGAAATGAAGAGATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp AAATCTTTATTACTTGGCCTCTTACATGGATGGCCTCATTCCAGGTaGTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCT +
Preference number: 1 (lower is better)
Translates to: KSLLLGLLHGWPHSR*YGGDKNRNPGTCMP
Trigger: AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATGAGGCCATCCATGTAAGAGGCCAAGTAATAAAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp ATATTAAAATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTaGATCCAGCCCTTGGTGAGTGGGCCTTGGACTGTACTTCACAAT +
Preference number: 1 (lower is better)
Translates to: ILKLEVGHRIPTPHI*IQPLVSGPWTVLHN
Trigger: ATTGTGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAATTTTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 90 bp CTGGTTGCACACTGCCATTTTCTACAGGTTCTCAAGTGCATGGGCTaGCAAGAGGGTTGGGTGTTTACATTTATTTTTAATAGAAATGGG +
Preference number: 1 (lower is better)
Translates to: LVAHCHFLQVLKCMG*QEGWVFTFIFNRNG
Trigger: CCCATTTCTATTAAAAATAAATGTAAACACCCAACCCTCTTGGCAGCCCATGCACTTGAGAACCTGTAGAAAATGGCAGTGTGCAACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CCATGCTGGTTGCACACTGCCATTTTCTACAGGTTCTCAAGTGCATaGGCTGCCAAGAGGGTTGGGTGTTTACATTTATTTTTAATAGAA +
Preference number: 1 (lower is better)
Translates to: PCWLHTAIFYRFSSA*AAKRVGCLHLFLIE
Trigger: TTCTATTAAAAATAAATGTAAACACCCAACCCTCTTGGCAGCCCATGCACTTGAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp TTCCTAAGGCCAAAATCCAAGTTCATTCAACAAATCTTTATTACTTaGCCTCTTACATGGATGGCCTCATTCCAGGTGCTATGGGGGAGA +
Preference number: 1 (lower is better)
Translates to: FLRPKSKFIQQIFIT*PLTWMASFQVLWGR
Trigger: TCTCCCCCATAGCACCTGGAATGAGGCCATCCATGTAAGAGGCCAAGTAATAAAGATTTGTTGAATGAACTTGGATTTTGGCCTTAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CCAAGTTCATTCAACAAATCTTTATTACTTGGCCTCTTACATGGATaGCCTCATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCT +
Preference number: 1 (lower is better)
Translates to: PSSFNKSLLLGLLHG*PHSRCYGGDKNRNP
Trigger: AGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATGAGGCCATCCATGTAAGAGGCCAAGTAATAAAGATTTGTTGAATGAACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp AATAAGGATCTTGATGTAATTGAGGACCTCAAGATGAGATCATCCTaGATTAGGGTGGCTCTTAAATTCAGTGACATGCATCCTTGGCAG +
Preference number: 1 (lower is better)
Translates to: NKDLDVIEDLKMRSS*IRVALKFSDMHPWQ
Trigger: CTGCCAAGGATGCATGTCACTGAATTTAAGAGCCACCCTAATCCAGGATGATCTCATCTTGAGGTCCTCAATTACATCAAGATCCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp ATTGCAAAGTACCCAATCTTTCTGGACCACGTCCTGGCAGTATGTTaGAAGAGCAGAAAAACTGATCTCTATCAATGTTGTAGATCCACT +
Preference number: 1 (lower is better)
Translates to: IAKYPIFLDHVLAVC*KSRKTDLYQCCRST
Trigger: AGTGGATCTACAACATTGATAGAGATCAGTTTTTCTGCTCTTCCAACATACTGCCAGGACGTGGTCCAGAAAGATTGGGTACTTTGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 90 bp AAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTaGTTTCACAGCACTTTCATATGCAATCTGTTTACAGCTATGTTA +
Preference number: 1 (lower is better)
Translates to: KKTTTIVLTVLLSPW*FHSTFICNLFTAML
Trigger: TAACATAGCTGTAAACAGATTGCATATGAAAGTGCTGTGAAATCACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 90 bp CCCCCAAAGATATGTTTGCCTAAAATCTCAGAATGTGACATTATTTaGAATAAGGATCTTGATGTAATTGAGGACCTCAAGATGAGATCA +
Preference number: 1 (lower is better)
Translates to: PPKICLPKISECDII*NKDLDVIEDLKMRS
Trigger: TGATCTCATCTTGAGGTCCTCAATTACATCAAGATCCTTATTCCAAATAATGTCACATTCTGAGATTTTAGGCAAACATATCTTTGGGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGCTGTGGCCACGGACGTaGGGAGCAGAGAGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGLWPRT*GAERLW
Trigger: CCACAGCCTCTCTGCTCCTCACGTCCGTGGCCACAG...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp GCCAGGGCGGTGAGGCCGACCTTGGCCAGGCCGTGGGTGGGTTGCTaGACTAGGCCAGAGAGTAAATCAGTAGAATTCCCACAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: ARAVRPTLARPWVGC*TRPESKSVEFPQAP
Trigger: TGGGGCCTGTGGGAATTCTACTGATTTACTCTCTGGCCTAGTCAAGCAACCCACCCACGGCCTGGCCAAGGTCGGCCTCACCGCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCTGTGGCCACGGACGTaGGGAGCAGAGAGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQLWPRT*GAERLW
Trigger: CCACAGCCTCTCTGCTCCTCACGTCCGTGGCCACAG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGGCAGGAGAATGGCATaGACCCGGGAGGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGGRRMA*TREAEL
Trigger: AAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTCCCCTCGGCGGCAGTaGTGGTTGCCAGCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSPRRQ*WLPAWL
Trigger: AAGCCAGGCTGGCAACCACCACTGCCGCCGAGGGGA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGCCCCAGCCTGAACAGTaGGAAGGCTCCTGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGPQPEQ*EGSCSF
Trigger: GAAGCTGCAGGAGCCTTCTCACTGTTCAGGCTGGGG...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGACTCCTGGCCACAAGTaGTCCACCCACCTCACCCTT +
Preference number: 2 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGTPGHK*STHLTL
Trigger: AAGGGTGAGGTGGGTGGATCACTTGTGGCCAGGAGT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAACCACACCCCAGCCTaGACAGTGAGAAGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGNHTPA*TVRRLL
Trigger: CAGGAGCCTTCTCACTGTTCAGGCTGGGGTGTGGTT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTCGATCTCGGCCCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWSISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGGGCCGAGATCGA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCTGGCGGGGAAAGAGTaGGCAGAGGCACTGAGCGTA +
Preference number: 2 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSLAGKE*AEALSV
Trigger: TACGCTCAGTGCCTCTGCCCACTCTTTCCCCGCCAG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGTCAACCCGGTGGTTCTaGAAACCACACCCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQSTRWF*KPHPSL
Trigger: CAGGCTGGGGTGTGGTTTTCAGAACCACCGGGTTGA...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCCAGCCGAAGTAGGGTaGAAAGGAGAGGGCACCCAG +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWPAEVG*KGEGTQ
Trigger: CTGGGTGCCCTCTCCTTTGCACCCTACTTCGGCTGG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGAGGCACTATCTGTCCTaGTTGCACCCACCTCCACCC +
Preference number: 2 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSRHYLS*LHPPPP
Trigger: GGGTGGAGGTGGGTGCAAGCAGGACAGATAGTGCCT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGCAGCTTCAAGCGCATaGCAAGACCATGGGAACAGC +
Preference number: 2 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGAASSA*QDHGNS
Trigger: GCTGTTCCCATGGTCTTGCCATGCGCTTGAAGCTGC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGGCCACCCAAAGTGGTaGGATTACGGGCATGGGCCA +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWGHPKW*DYGHGP
Trigger: TGGCCCATGCCCGTAATCCCACCACTTTGGGTGGCC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGAGCTTGCAGTGAGCTaGGATCACGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWELAVS*DHATAL
Trigger: GAGTGCAGTGGCGTGATCTCAGCTCACTGCAAGCTC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGGCAGCTTCAAGCGCATaGCAAGACCATGGGAACAGC +
Preference number: 2 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQAASSA*QDHGNS
Trigger: GCTGTTCCCATGGTCTTGCCATGCGCTTGAAGCTGC...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGACCTCCACCCAGGGCTaGCCAACAATAGCCTGTTTC +
Preference number: 2 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSTSTQG*PTIACF
Trigger: GAAACAGGCTATTGTTGGCCAGCCCTGGGTGGAGGT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGTAATCCCAGCACTGTaGGAGGCGGATCACGAGGTC +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWVIPAL*EADHEV
Trigger: GACCTCGTGATCCGCCTCCCACAGTGCTGGGATTAC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGCTCCATTAACATCCTaGCCTGAAGAACCAACCCCT +
Preference number: 2 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGAPLTS*PEEPTP
Trigger: AGGGGTTGGTTCTTCAGGTCAGGATGTTAATGGAGC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGAGCTTGCAGTGAGCTaGGATCACGCCACTGCATTC +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWELAVS*DHATAF
Trigger: GAATGCAGTGGCGTGATCTCAGCTCACTGCAAGCTC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTTCACGCCATTCTTCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWFTPFF*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp CCTCCACTCTCTCTAGTGAAGACGCTGAGCTCGCAGCCATGCTGGTaGCACACTGCCATTTTCTACAGGTTCTCAAGTGCATGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: PPLSLVKTLSSQPCW*HTAIFYRFSSAWAA
Trigger: GGCAGCCCATGCACTTGAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCGAGCTCAGCGTCTTCACTAGAGAGAGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGACAACCTGGAAAATTaGGCTGAAGACCAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGDNLEN*AEDQEA
Trigger: TGCCTCTTGGTCTTCAGCTCAATTTTCCAGGTTGTC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGATGCTAAGGCCTCGGTaGCACCTCCCTAAGGTTTTA +
Preference number: 2 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSMLRPR*HLPKVL
Trigger: TAAAACCTTAGGGAGGTGGCACCGAGGCCTTAGCAT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTCCCCTCGGCGGCAGTaGTGGTTGCCAGCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPSPRRQ*WLPAWL
Trigger: AAGCCAGGCTGGCAACCACCACTGCCGCCGAGGGGA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGTTGTCCGGCCAACATaGCCCCTTCCCGCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPVVRPT*PLPACP
Trigger: AGGGCAGGCGGGAAGGGGCCATGTTGGCCGGACAAC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGATTACCCCTCTTGGATaGATCTGCAACAAGCACTCC +
Preference number: 2 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQITPLG*ICNKHS
Trigger: GGAGTGCTTGTTGCAGATGCATCCAAGAGGGGTAAT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTGGTGCGGGTCTTATTaGTCACCAACTCTTGCTGCT +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWWCGSY*SPTLAA
Trigger: AGCAGCAAGAGTTGGTGAGCAATAAGACCCGCACCA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGAGGCCTCACAGCCATaGAGAACTGTGAGTCAGTTA +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWEASQP*RTVSQL
Trigger: TAACTGACTCACAGTTCTGCATGGCTGTGAGGCCTC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAGATGGAATGTTTCATaGACACAGTCCCTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQRWNVS*TQSLSP
Trigger: TGGGGACAGGGACTGTGTCCATGAAACATTCCATCT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCGCATGGCAAGACCATaGGAACAGCCTATTGATACA +
Preference number: 2 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQRMARP*EQPIDT
Trigger: TGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGGCTGTAAGGCTCACTTaGTTTTCAGTAGTCAACCCG +
Preference number: 2 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSAVRLT*FSVVNP
Trigger: CGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGC...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCGCAATTACCCCTCTTaGATGCATCTGCAACAAGCA +
Preference number: 2 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQRNYPS*MHLQQA
Trigger: TGCTTGTTGCAGATGCATCCAAGAGGGGTAATTGCG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTTGGGCTGCTTTAAGTaGATAGCAGAGGCCACCTTC +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWLGCFK*IAEATF
Trigger: GAAGGTGGCCTCTGCTATCCACTTAAAGCAGCCCAA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCTGGTGGGAGGTGACTaGATCACAGGAACAGTTTCT +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWLVGGD*ITGTVS
Trigger: AGAAACTGTTCCTGTGATCCAGTCACCTCCCACCAG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp AATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGAGTGGGCCTaGGACTGTACTTCACAATCCCATCTTCACCTGCAGTTGTCCGGC +
Preference number: 2 (lower is better)
Translates to: NPNPTYLDPALGEWA*DCTSQSHLHLQLSG
Trigger: GCCGGACAACTGCAGGTGAAGATGGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGATTAACATCCTGACCTaGAGAACCAACCCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWINILT*RTNPLP
Trigger: AGGCAAGGGGTTGGTTCTTCAGGTCAGGATGTTAAT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGATGTTTCTCAAGAAGTaGAAGGCCAAGGGTCACTTC +
Preference number: 2 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQMFLKK*KAKGHF
Trigger: GAAGTGACCCTTGGCCTTTCACTTCTTGAGAAACAT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCCCCAGCCTGAACAGTaGGAAGGCTCCTGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGPQPEQ*EGSCSF
Trigger: GAAGCTGCAGGAGCCTTCTCACTGTTCAGGCTGGGG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAGAAAGGGAAGAACCTaGAATGGTGTGTACCAAGGA +
Preference number: 2 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQRKGRT*NGVYQG
Trigger: TCCTTGGTACACACCATTTCAGGTTCTTCCCTTTCT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCCCTTCCAGCTCACCTaGTTACTCAGTTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWPFQLT*LLSSIF
Trigger: GAAAATGGAACTGAGTAATCAGGTGAGCTGGAAGGG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAATGACACACAGCTATaGAGAATGAGGCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWNDTQL*RMRLLH
Trigger: GTGGAGCAGCCTCATTCTTCATAGCTGTGTGTCATT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAATAGTAAAGAGCTCTaGCCACTGCTGCTCACCCTA +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWNSKEL*PLLLTL
Trigger: TAGGGTGAGCAGCAGTGGTCAGAGCTCTTTACTATT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGATCTCCTGACCTCGTaGTCCACCTGCCTCGGCTTC +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVDLLTS*STCLGF
Trigger: GAAGCCGAGGCAGGTGGATCACGAGGTCAGGAGATC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGGATCCAGCCCTTGGTaGGTGGGCCTTGGACTGTAC +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVGSSPW*VGLGLY
Trigger: GTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCCAGCCGAAGTAGGGTaGAAAGGAGAGGGCACCCAG +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPPAEVG*KGEGTQ
Trigger: CTGGGTGCCCTCTCCTTTGCACCCTACTTCGGCTGG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGCACTGTTCTGGAGGTaGTGTGCCTGCTGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGALFWR*CACWSC
Trigger: GCAGGACCAGCAGGCACAGCACCTCCAGAACAGTGC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGTTGCCAGCCTGGCTTaGGTTTGCCCAAAAGTAATA +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWVASLA*VCPKVI
Trigger: TATTACTTTTGGGCAAACGCAAGCCAGGCTGGCAAC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGACAGTTCCTTGGGCTaGTTTAAGTGGATAGCAGAG +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWDSSLG*FKWIAE
Trigger: CTCTGCTATCCACTTAAAGCAGCCCAAGGAACTGTC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGACGGCACAGGGAGGTaGCCTACTCGCGGTTCATGT +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGDGTGR*PTRGSC
Trigger: ACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCCCCAGGGGCGCCTGTaGATGTGTCGCTCTGTCGCT +
Preference number: 2 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQPQGRL*MCRSVA
Trigger: AGCGACAGAGCGACACATCCACAGGCGCCCCTGGGG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTCCGCGAGATTAGGCTaGTCCCATTTCCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPSARLG*SHFPRG
Trigger: GCCCCTGGGGAAATGGGACCAGCCTAATCTCGCGGA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACTCCGGGGCACTGTTCTaGAGGTGCTGTGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENSGALF*RCCACW
Trigger: CCAGCAGGCACAGCACCTCCAGAACAGTGCCCCGGA...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACTGGCGGGGAAAGAGTaGGCAGAGGCACTGAGCGTA +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVLAGKE*AEALSV
Trigger: TACGCTCAGTGCCTCTGCCCACTCTTTCCCCGCCAG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTACCTTGGCCAGGCCGTaGGTGGGTTGCTTGACTAGG +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGTLARP*VGCLTR
Trigger: CCTAGTCAAGCAACCCACCCACGGCCTGGCCAAGGT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTTTGGGAGGTCAAGATaGGAGGATCACTTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWFGRSR*EDHLRQ
Trigger: TTGCCTCAAGTGATCCTCCCATCTTGACCTCCCAAA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGATGGGAACAGCCTATTaGTACAGAATTAGATCAGCT +
Preference number: 2 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGMGTAY*YRIRSA
Trigger: AGCTGATCTAATTCTGTATCAATAGGCTGTTCCCAT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTAACCACACCCCAGCCTaGACAGTGAGAAGGCTCCTG +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGNHTPA*TVRRLL
Trigger: CAGGAGCCTTCTCACTGTTCAGGCTGGGGTGTGGTT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGATGCTTGTGGCTGGTaGGAAAACAACACTGAAACA +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWDACGW*ENNTET
Trigger: TGTTTCAGTGTTGTTTTCTCACCAGCCACAAGCATC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGATTCTAAGGGGCCTGTaGAGTTTACCTACTTTACTC +
Preference number: 2 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQILRGL*SLPTLL
Trigger: GAGTAAAGTAGGTAAACTTCACAGGCCCCTTAGAAT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGGCCGTGGGTGGGTTaGTTGACTAGGCCAGAGAGT +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRPWVG*LTRPES
Trigger: ACTCTCTGGCCTAGTCAAGCAACCCACCCACGGCCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCACCGCTGGAGGAATaGAGAGGCGGGCGGGGGCGC +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSPPLEE*RGGRGR
Trigger: GCGCCCCCGCCCGCCTCTGCATTCCTCCAGCGGTGG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCTGATGTTCACAAGATaGTGGGTTCTACCACTCCAA +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWLMFTR*WVLPLQ
Trigger: TTGGAGTGGTAGAACCCAGCATCTTGTGAACATCAG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACTGGGAGGCAGAGCTTaGAGTGAGCTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVLGGRA*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAAGCTCTGCCTCCCAG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCCTTCACCAAGAAGATaGAATGTTTCATGGACACAG +
Preference number: 2 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQPSPRR*NVSWTQ
Trigger: CTGTGTCCATGAAACATTCCATCTTCTTGGTGAAGG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTATTAGCCAGGCGAGGTaGTGGGCACCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPISQAR*WAPVVP
Trigger: TGGGACTACAGGTGCCCACCACCTCGCCTGGCTAAT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAGCCTCCCGAGTAGCTaGGGCTACAGGCACCCGCCA +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSLPSS*GYRHPP
Trigger: TGGCGGGTGCCTGTAGCCCCAGCTACTCGGGAGGCT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp GAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTaGGTGAGTGGGCCTTGGACTGTACTTCACAATCCCATCTTCACC +
Preference number: 2 (lower is better)
Translates to: EVGHRIPTPHIWIQP*VSGPWTVLHNPIFT
Trigger: GGTGAAGATGGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACACTCCTGGCCACAAGTaGTCCACCCACCTCACCCTT +
Preference number: 2 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENTPGHK*STHLTL
Trigger: AAGGGTGAGGTGGGTGGATCACTTGTGGCCAGGAGT...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGGGTTTTATTGTTCACTaGCTTCAAAACCCATGTCTC +
Preference number: 2 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSGFIVH*LQNPCL
Trigger: GAGACATGGGTTTTGAAGGCAGTGAACAATAAAACC...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAGCCTGGCTTGCGTTTaGCCAAAAGTAATAGTAAAG +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWSLACV*PKVIVK
Trigger: CTTTACTATTACTTTTGGGCAAACGCAAGCCAGGCT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGGCGGCAGTGGTGGTTaGCAGCCTGGCTTGCGTTTG +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVGGSGG*QPGLRL
Trigger: CAAACGCAAGCCAGGCTGGCAACCACCACTGCCGCC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCTGAGATCACGCCACTaGATTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPLRSRH*IPAWVT
Trigger: TGTCACCCAGGCTGGAATGCAGTGGCGTGATCTCAG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTCGATCTCGGCCCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGGGCCGAGATCGA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTTGGTGGTTGCCAGCCTaGCTTGCGTTTGCCCAAAAG +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGWWLPA*LAFAQK
Trigger: CTTTTGGGCAAACGCAAGCCAGGCTGGCAACCACCA...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGATTAGCCGGGCGCGGTaGCAGGAGCCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVISRAR*QEPVVP
Trigger: TGGGACTACAGGCTCCTGCCACCGCGCCCGGCTAAT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTGGCCAGGCTGGTCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVWPGWS*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGACCAGCCTGGCCA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTAGCCCTTCTTCATCCTaGCAGCACAGCAGTGCTCTA +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGSPSSS*QHSSAL
Trigger: TAGAGCACTGCTGTGCTGTCAGGATGAAGAAGGGCT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAGGCGGAGCTTGCAGTaGGCTGAGATCACGCCACTG +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVRRSLQ*AEITPL
Trigger: CAGTGGCGTGATCTCAGCTCACTGCAAGCTCCGCCT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAATAGTAATTATTTCTaGGTGGTGGGATCACGAGTC +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWNSNYF*VVGSRV
Trigger: GACTCGTGATCCCACCACTCAGAAATAATTACTATT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGGTCAAGCGAAGACTaGGGCAGGGATTGGAGTGAT +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRSSED*GRDWSD
Trigger: ATCACTCCAATCCCTGCCTCAGTCTTCGCTTGACCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACTGACAGCACAGCAGTaGTCTACGCTTCCTTGCACA +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVLTAQQ*STLPCT
Trigger: TGTGCAAGGAAGCGTAGAGCACTGCTGTGCTGTCAG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGTACAGACTTGAACCATaGCCTAAGGATTTAATTCTA +
Preference number: 2 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGYRLEP*PKDLIL
Trigger: TAGAATTAAATCCTTAGGGCATGGTTCAAGTCTGTA...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGTATCTGTTCTATGTTaGATGCTTCAGAACCCTGTA +
Preference number: 2 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWVSVLC*MLQNPV
Trigger: TACAGGGTTCTGAAGCATGCAACATAGAACAGATAC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCTCAAGTGCATGGGCTaGCAAGAGGGTTGGGTGTTT +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPLKCMG*QEGWVF
Trigger: AAACACCCAACCCTCTTGGCAGCCCATGCACTTGAG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCTACAGGTTCTCAAGTaGATGGGCTGCCAAGAGGGT +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPLQVLK*MGCQEG
Trigger: ACCCTCTTGGCAGCCCATGCACTTGAGAACCTGTAG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGGTGCTGTGCCTGCTaGTCCTGCTTTGTTTCCACA +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRCCAC*SCFVST
Trigger: TGTGGAAACAAAGCAGGACCAGCAGGCACAGCACCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGACGAGCAGAAAAATTTaGGCATTACACAAACAACAG +
Preference number: 2 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSTSRKI*ALHKQQ
Trigger: CTGTTGTTTGTGTAATGCCCAAATTTTTCTGCTCGT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGTGATGGTGGGCAGCTaGAAGGCCGCACATATAATC +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPVMVGS*KAAHII
Trigger: GATTATATGTGCGGCCTTCCAGCTGCCCACCATCAC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGTGATGGTGGGCAGCTaGAAGGCCGCACATATAATC +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVVMVGS*KAAHII
Trigger: GATTATATGTGCGGCCTTCCAGCTGCCCACCATCAC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCTCTGGGCAAGAAACTaGGGAATAGAGAGCGGGAGT +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPLWARN*GIESGS
Trigger: ACTCCCGCTCTCTATTCCCCAGTTTCTTGCCCAGAG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGACCTTGGCCAGGCCGTaGGTGGGTTGCTTGACTAGG +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVTLARP*VGCLTR
Trigger: CCTAGTCAAGCAACCCACCCACGGCCTGGCCAAGGT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGTGGCAAACAATGTCTaGATCCGTACACCACCGCTG +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGVANNV*IRTPPL
Trigger: CAGCGGTGGTGTACGGATCCAGACATTGTTTGCCAC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGCTCGCAGCCATGCTaGTTGCACACTGCCATTTTC +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVSSQPC*LHTAIF
Trigger: GAAAATGGCAGTGTGCAACCAGCATGGCTGCGAGCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGGCCACCCAAAGTGGTaGGATTACGGGCATGGGCCA +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVGHPKW*DYGHGP
Trigger: TGGCCCATGCCCGTAATCCCACCACTTTGGGTGGCC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp TACCAGCTTGTATTTATACCTACCCAGGAGGACACCCGCCAGGCTTaGTCATTGCTGGTACATCTGAGAAGAACACCTCCTGCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: YQLVFIPTQEDTRQA*SLLVHLRRTPPALS
Trigger: AGAAAGAGCAGGAGGTGTTCTTCTCAGATGTACCAGCAATGACAAAGCCTGGCGGGTGTCCTCCTGGGTAGGTATAAATACAAGCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTCAACCCGGTGGTTCTaGAAACCACACCCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSTRWF*KPHPSL
Trigger: CAGGCTGGGGTGTGGTTTTCAGAACCACCGGGTTGA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGGCATGCAGATCACTTaGGGTCAAGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVGMQIT*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCAAGTGATCTGCATGCC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGTGGAGGTGCTGTGCCTaGTGGTCCTGCTTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: FKRMARPWEQPIDTELDQWRCCA*WSCFVS
Trigger: GGAAACAAAGCAGGACCAGCAGGCACAGCACCTCCA...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGTTCTGGAGGTGCTGTaGCTGCTGGTCCTGCTTTGT +
Preference number: 2 (lower is better)
Translates to: FKRMARPWEQPIDTELDQVLEVL*LLVLLC
Trigger: ACAAAGCAGGACCAGCAGGCACAGCACCTCCAGAAC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCCCAGGGGCGCCTGTaGATGTGTCGCTCTGTCGCT +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSPQGRL*MCRSVA
Trigger: AGCGACAGAGCGACACATCCACAGGCGCCCCTGGGG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTTGGTGAGTGGGCCTTaGACTGTACTTCACAATCCC +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPLVSGP*TVLHNP
Trigger: GGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGTTTGAGACCAGTCTaGCCAACACAGCGAAACCCT +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVSLRPV*PTQRNP
Trigger: AGGGTTTCGCTGTGTTGGCCAGACTGGTCTCAAACT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCACTGTCGCCCAGGCTaGAGTGCAATAGCACGATCG +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVHCRPG*SAIARS
Trigger: CGATCGTGCTATTGCACTCCAGCCTGGGCGACAGTG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGCCAGGCTCTCACTGTaGCTGTGGCTCTGTATGGGA +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVARLSL*LWLCMG
Trigger: TCCCATACAGAGCCACAGCCACAGTGAGAGCCTGGC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAATGACACACAGCTATaGAGAATGAGGCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVNDTQL*RMRLLH
Trigger: GTGGAGCAGCCTCATTCTTCATAGCTGTGTGTCATT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAATAGTAAAGAGCTCTaGCCACTGCTGCTCACCCTA +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVNSKEL*PLLLTL
Trigger: TAGGGTGAGCAGCAGTGGTCAGAGCTCTTTACTATT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTATCACTTTCGCTTTCTaGCAGTTCCTTGGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPITFAF*QFLGLL
Trigger: AAGCAGCCCAAGGAACTGTCAGAAAGCGAAAGTGAT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCAGGCAGGGATTGGAGTaGTGCTGTCGCAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSRQGLE*CCRRPG
Trigger: CCCTGGCCTGCGACAGCATCACTCCAATCCCTGCCT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTGTGCCTGCTGGTCCTaGTTTGTTTCCACATCATCT +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPCACWS*FVSTSS
Trigger: AGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACACAATCTCAGCTCACTaGAACTTTTGCCTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENTISAH*NFCLPG
Trigger: GCCAGGGAGGCAAAAGTTGCAGTGAGCTGAGATTGT...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGGCGGCAGTGGTGGTTaGCAGCCTGGCTTGCGTTTG +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSGGSGG*QPGLRL
Trigger: CAAACGCAAGCCAGGCTGGCAACCACCACTGCCGCC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGACAGTTCCTTGGGCTaGTTTAAGTGGATAGCAGAG +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPDSSLG*FKWIAE
Trigger: CTCTGCTATCCACTTAAAGCAGCCCAAGGAACTGTC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTTCCAGAGCAGGGGGTaGCCGCCGGACAGAGATGTC +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMFQSRG*PPDRDV
Trigger: GACATCTCTGTCCGGCGGGCACCCCCTGCTCTGGAA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAGGATCTCAGCTCACTaGAACCTCTGCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVRISAH*NLCLPG
Trigger: ACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCCT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGGGCATGGTGGTGCATaGCTGTCATACCAGCTACTC +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVGHGGA*LSYQLL
Trigger: GAGTAGCTGGTATGACAGGCATGCACCACCATGCCC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTCCGGGGCACTGTTCTaGAGGTGCTGTGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: KRKKSLLSETVSGGINRLSGALF*RCCACW
Trigger: CCAGCAGGCACAGCACCTCCAGAACAGTGCCCCGGA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGATGGAATGTTTCATaGACACAGTCCCTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRWNVS*TQSLSP
Trigger: TGGGGACAGGGACTGTGTCCATGAAACATTCCATCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCGCATGGCAAGACCATaGGAACAGCCTATTGATACA +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGRMARP*EQPIDT
Trigger: TGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTACAATTACAAGACCATaGGGTCACGACCACAGAAGC +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPTITRP*GHDHRS
Trigger: GCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTGGCCAGGCTGGTCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSWPGWS*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGACCAGCCTGGCCA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp CATATGCAATCTGTTTACAGCTATGTTATTCACAATAGCAAAAAGTaGGTGGTGGTGCATGTGGGTGTTGACCGGGCTGGGCCAAGAAGC +
Preference number: 2 (lower is better)
Translates to: HMQSVYSYVIHNSKK*VVVHVGVDRAGPRS
Trigger: GCTTCTTGGCCCAGCCCGGTCAACACCCACATGCACCACCACCAACTTTTTGCTATTGTGAATAACATAGCTGTAAACAGATTGCATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAGGCGGAGCTTGCAGTaGGCTGAGATCACGCCACTG +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMRRSLQ*AEITPL
Trigger: CAGTGGCGTGATCTCAGCTCACTGCAAGCTCCGCCT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTACCTGCACGAAGCTATaGACTATTTCCTCATCCCTT +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGTCTKL*TISSSL
Trigger: AAGGGATGAGGAAATAGTTCATAGCTTCGTGCAGGT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACATCACGCAACGGAATaGCACACAGCTATGAAGAAT +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVHHATE*HTAMKN
Trigger: ATTCTTCATAGCTGTGTGTCATTCCGTTGCGTGATG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCATCACGCAACGGAATaGCACACAGCTATGAAGAAT +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGHHATE*HTAMKN
Trigger: ATTCTTCATAGCTGTGTGTCATTCCGTTGCGTGATG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCCCATCTGTGGATGTaGGGCCAAAGTCCATCGGCC +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSPHLWM*GQSPSA
Trigger: GGCCGATGGACTTTGGCCTCACATCCACAGATGGGG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGGATCCAGCCCTTGGTaGGTGGGCCTTGGACTGTAC +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNGSSPW*VGLGLY
Trigger: GTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTATGCTGGTTGCACACTaGCATTTTCTACAGGTTCTC +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPMLVAH*HFLQVL
Trigger: GAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCAT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCTGGGAGGCGGAGGTTaGCGTGAGCCAAGATTGCAC +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLGGGG*REPRLH
Trigger: GTGCAATCTTGGCTCACGGCAACCTCCGCCTCCCAG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTCCGCGAGATTAGGCTaGTCCCATTTCCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMSARLG*SHFPRG
Trigger: GCCCCTGGGGAAATGGGACCAGCCTAATCTCGCGGA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAGCCTGCTTGGCCTCTaGGTAGAGAAAGGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNSLLGL*VEKGQP
Trigger: GGGCTGGCCTTTCTCTACCCAGAGGCCAAGCAGGCT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGCACCTTCTCTATTTTaGGCATCAACACCAAGGACA +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVAPSLF*ASTPRT
Trigger: TGTCCTTGGTGTTGATGCCCAAAATAGAGAAGGTGC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCTCTGGGCAAGAAACTaGGGAATAGAGAGCGGGAGT +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVLWARN*GIESGS
Trigger: ACTCCCGCTCTCTATTCCCCAGTTTCTTGCCCAGAG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGTCCAGAGTGTGAACTaGCCTGCTTGTATCTCCCCT +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVVQSVN*PACISP
Trigger: AGGGGAGATACAAGCAGGCCAGTTCACACTCTGGAC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGACGGCACAGGGAGGCTaGGAGGGAGGAAGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMTAQGG*EGGRKA
Trigger: TGCTTTCCTTCCTCCCTCCCAGCCTCCCTGTGCCGT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGAGCTTGCAGTGAGCTaGGATCACGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSELAVS*DHATAL
Trigger: GAGTGCAGTGGCGTGATCTCAGCTCACTGCAAGCTC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCAGGTCTGTGCTCTGTaGCCCCATCACGCAACGGAA +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSQVCAL*PHHATE
Trigger: TTCCGTTGCGTGATGGGGTCACAGAGCACAGACCTG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGGCATGCAGATCACTTaGGGTCAAGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVGMQIT*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCAAGTGATCTGCATGCC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGCCTTTTCTGTGGTCTaGTGTTCACAAGATGCTGGG +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVAFSVV*CSQDAG
Trigger: CCCAGCATCTTGTGAACATCAGACCACAGAAAAGGC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTCCCCATCTTGGAGGTaGGAAAAATTGGACCCGAGA +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSPSWR*EKLDPR
Trigger: TCTCGGGTCCAATTTTTCTCACCTCCAAGATGGGGA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCTCTGGATCGGGTTTTaGCACAAGTCATTGCACAGC +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVLWIGF*HKSLHS
Trigger: GCTGTGCAATGACTTGTGTCAAAACCCGATCCAGAG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGAAGAACCAACCCCTTaGCTTCACCAAGAAGATGGA +
Preference number: 2 (lower is better)
Translates to: FKRMARPWEQPIDTELDQEEPTP*LHQEDG
Trigger: TCCATCTTCTTGGTGAAGGCAAGGGGTTGGTTCTTC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGAGGCGTGAGTCACCATaGCCAGCAAAGAAGTATGTT +
Preference number: 2 (lower is better)
Translates to: FKRMARPWEQPIDTELDQRRESP*PAKKYV
Trigger: AACATACTTCTTTGCTGGGCATGGTGACTCACGCCT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTTGCTCTACGCTTCCTTaGACAGAAACTCATAAGATG +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGCSTLP*TETHKM
Trigger: CATCTTATGAGTTTCTGTGCAAGGAAGCGTAGAGCA...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGAGTGTGAACTGGCCTaGTTGTATCTCCCCTCGGCG +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNECELA*LYLPSA
Trigger: CGCCGAGGGGAGATACAAGCAGGCCAGTTCACACTC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAATCCCATCTTCACCTaGAGTTGTCCGGCCAACATG +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVNPIFT*SCPANM
Trigger: CATGTTGGCCGGACAACTGCAGGTGAAGATGGGATT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTGGTGCGGGTCTTATTaGTCACCAACTCTTGCTGCT +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVWCGSY*SPTLAA
Trigger: AGCAGCAAGAGTTGGTGAGCAATAAGACCCGCACCA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCTGGGAGGCAGAGCTTaGAGTGAGCTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLGGRA*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAAGCTCTGCCTCCCAG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCTGCCATGTAAGATGTaGCTTGCTTCCCCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVLPCKM*LASPLP
Trigger: AGGCAAAGGGGAAGCAAGGCACATCTTACATGGCAG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCTCATAAGATGCTTGTaGCTGGTGAGAAAACAACAC +
Preference number: 2 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPLIRCL*LVRKQH
Trigger: GTGTTGTTTTCTCACCAGCCACAAGCATCTTATGAG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGATTAGCCAGGCGAGGTaGTGGGCACCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMISQAR*WAPVVP
Trigger: TGGGACTACAGGTGCCCACCACCTCGCCTGGCTAAT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGGCTTTGGAAAGCATaGAGGGGTTTCCACATATTA +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRLWKA*RGFHIL
Trigger: TAATATGTGGAAACCCCTCCATGCTTTCCAAAGCCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGACGGCTTTTCCGTGCTaGGAGGGAGGAAAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMTAFPC*EGGKQR
Trigger: CCTCTGCTTTCCTCCCTCCCAGCACGGAAAAGCCGT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGTAATTATTTCTGAGTaGTGGGATCACGAGTCCTGT +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGVIISE*WDHESC
Trigger: ACAGGACTCGTGATCCCACCACTCAGAAATAATTAC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGCAAGCTCCGCCTCCTaGGTTCACGCCATTCTTCTG +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNASSAS*VHAILL
Trigger: CAGAAGAATGGCGTGAACCCAGGAGGCGGAGCTTGC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTTCTCTGGAGGGAGCTaGGCGACGATACTACTAAAC +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVFSGGS*ATILLN
Trigger: GTTTAGTAGTATCGTCGCCCAGCTCCCTCCAGAGAA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCTCCTGCTCTTTCTCTaGAGGGAGCTGGGCGACGAT +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLLLFL*RELGDD
Trigger: ATCGTCGCCCAGCTCCCTCCAGAGAAAGAGCAGGAG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACATCCTGGATTAGGGTaGCTCTTAAATTCAGTGACA +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVHPGLG*LLNSVT
Trigger: TGTCACTGAATTTAAGAGCCACCCTAATCCAGGATG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp AATATTAAAATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTaGGATCCAGCCCTTGGTGAGTGGGCCTTGGACTGTACTTCACAA +
Preference number: 2 (lower is better)
Translates to: NIKIGSRSQNPNPTY*DPALGEWALDCTSQ
Trigger: TTGTGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAATTTTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGATTAACATCCTGACCTaGAGAACCAACCCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVINILT*RTNPLP
Trigger: AGGCAAGGGGTTGGTTCTTCAGGTCAGGATGTTAAT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGTCACCAGGCTTTTTCTaGACTTCCAGCTCCATTAAC +
Preference number: 2 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQSPGFF*TSSSIN
Trigger: GTTAATGGAGCTGGAAGTTCAGAAAAAGCCTGGTGA...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCAGCTCAGCAGCCTCTaGGGCTGGCCTACTTTTCAA +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMQLSSL*GWPTFQ
Trigger: TTGAAAAGTAGGCCAGCCTCAGAGGCTGCTGAGCTG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGCAGCTCAGCAGCCTCTaGGGCTGGCCTACTTTTCAA +
Preference number: 2 (lower is better)
Translates to: KRKKSLLSETVSGGINRLQLSSL*GWPTFQ
Trigger: TTGAAAAGTAGGCCAGCCTCAGAGGCTGCTGAGCTG...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGATGCTTGTGGCTGGTaGGAAAACAACACTGAAACA +
Preference number: 2 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQDACGW*ENNTET
Trigger: TGTTTCAGTGTTGTTTTCTCACCAGCCACAAGCATC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAGCTACTCCAGAGGCTaGGGGGAAGACTTGCTCAAG +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNSYSRG*GEDLLK
Trigger: CTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGCT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCACATATGCTGGGACTaGGAAAGGTTTTTGTGTTTT +
Preference number: 2 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGHICWD*ERFLCF
Trigger: AAAACACAAAAACCTTTCTCAGTCCCAGCATATGTG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTTCACGCCATTCTTCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMFTPFF*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCTGAGATCACGCCACTaGATTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLRSRH*IPAWVT
Trigger: TGTCACCCAGGCTGGAATGCAGTGGCGTGATCTCAG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGCCTATGTAATTGTATaGACAGTTCTCTATTGGACC +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVAYVIV*TVLYWT
Trigger: GGTCCAATAGAGAACTGTGCATACAATTACATAGGC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGACAAGGAAGGAATCTTaGCTACAGCCTTCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVTRKES*LQPSEA
Trigger: TGCCTCTGAAGGCTGTAGGCAAGATTCCTTCCTTGT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACACCTCCACCCAGGGCTaGCCAACAATAGCCTGTTTC +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNTSTQG*PTIACF
Trigger: GAAACAGGCTATTGTTGGCCAGCCCTGGGTGGAGGT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTGGTGGTTGCCAGCCTaGCTTGCGTTTGCCCAAAAG +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNWWLPA*LAFAQK
Trigger: CTTTTGGGCAAACGCAAGCCAGGCTGGCAACCACCA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGGCTGCCAAGAGGGTTaGGTGTTTACATTTATTTTT +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVGCQEG*VFTFIF
Trigger: AAAAATAAATGTAAACACCCAACCCTCTTGGCAGCC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCCAGCCCTTGGTGAGTaGGCCTTGGACTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNPALGE*ALDCTS
Trigger: TGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCAGAGGGACTGGGAATaGGTAGGATGTCTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMQRDWE*VGCLWW
Trigger: CCACCAGAGACATCCTACCCATTCCCAGTCCCTCTG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGGAGACCGAGGCAAGTaGATCACGAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNGDRGK*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACTTGCCTCGGTCTCC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCTGTTAACACGAACCTaGAAAGAGGTCCAGTCATCC +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVLLTRT*KEVQSS
Trigger: GGATGACTGGACCTCTTTCCAGGTTCGTGTTAACAG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAAGATGAGATCATCCTaGATTAGGGTGGCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVKMRSS*IRVALK
Trigger: TTTAAGAGCCACCCTAATCCAGGATGATCTCATCTT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGGAAGAGGATCATCCTaGATGTCACCAGCCCACTGG +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSGRGSS*MSPAHW
Trigger: CCAGTGGGCTGGTGACATCCAGGATGATCCTCTTCC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp CCTGCTTTCCTTAGCGCCCCTAAATTTAAAGGTATCTGTTCTATGTaGCATGCTTCAGAACCCTGTAGAAACAACCAGCAAATCCACTGT +
Preference number: 2 (lower is better)
Translates to: PAFLSAPKFKGICSM*HASEPCRNNQQIHC
Trigger: ACAGTGGATTTGCTGGTTGTTTCTACAGGGTTCTGAAGCATGCAACATAGAACAGATACCTTTAAATTTAGGGGCGCTAAGGAAAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp ATTCCTAAGGCCAAAATCCAAGTTCATTCAACAAATCTTTATTACTaGGCCTCTTACATGGATGGCCTCATTCCAGGTGCTATGGGGGAG +
Preference number: 2 (lower is better)
Translates to: IPKAKIQVHSTNLYY*ASYMDGLIPGAMGE
Trigger: CTCCCCCATAGCACCTGGAATGAGGCCATCCATGTAAGAGGCCAAGTAATAAAGATTTGTTGAATGAACTTGGATTTTGGCCTTAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGACAGGCAGAACCTGGTaGAACAGCCAAGGGACAAGT +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMTGRTW*NSQGTS
Trigger: ACTTGTCCCTTGGCTGTTTCACCAGGTTCTGCCTGT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAGCCCTTCTTCATCCTaGCAGCACAGCAGTGCTCTA +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNSPSSS*QHSSAL
Trigger: TAGAGCACTGCTGTGCTGTCAGGATGAAGAAGGGCT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGCAGAAAGAATTCTTTaGGTAAGCCTGGAAGGTGGA +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVAERIL*VSLEGG
Trigger: TCCACCTTCCAGGCTTACTCAAAGAATTCTTTCTGC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCGTGGGTGGGTTGCTTaGCTAGGCCAGAGAGTAAAT +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMRGWVA*LGQRVN
Trigger: ATTTACTCTCTGGCCTAGTCAAGCAACCCACCCACG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAATAATGGTACATTGCTaGCTAAATACTTTCGGACCA +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVIMVHC*LNTFGP
Trigger: TGGTCCGAAAGTATTTAGTCAGCAATGTACCATTAT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAGAAAGGCCAGCCCCTaGAGAAAGCCCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMRKASP*RKPFFI
Trigger: GATGAAGAAGGGCTTTCTGCAGGGGCTGGCCTTTCT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGAGAAAGGCCAGCCCCTaGAGAAAGCCCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: KRKKSLLSETVSGGINRLRKASP*RKPFFI
Trigger: GATGAAGAAGGGCTTTCTGCAGGGGCTGGCCTTTCT...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCCTCTTGGATGCATCTaGAACAAGCACTCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMPLGCI*NKHSPA
Trigger: AGCTGGGGAGTGCTTGTTGCAGATGCATCCAAGAGG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCTCAAGTGCATGGGCTaGCAAGAGGGTTGGGTGTTT +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNLKCMG*QEGWVF
Trigger: AAACACCCAACCCTCTTGGCAGCCCATGCACTTGAG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCTACAGGTTCTCAAGTaGATGGGCTGCCAAGAGGGT +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLQVLK*MGCQEG
Trigger: ACCCTCTTGGCAGCCCATGCACTTGAGAACCTGTAG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGATGCTGGTTGCACACTaGCATTTTCTACAGGTTCTC +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVMLVAH*HFLQVL
Trigger: GAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCAT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACCCCAAAGATATGTTTaGCTAAAATCTCAGAATGTG +
Preference number: 2 (lower is better)
Translates to: VKLFPTEMVSHSSISACVPQRYV*LKSQNV
Trigger: CACATTCTGAGATTTTAGGCAAACATATCTTTGGGG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGCACCTTCTCTATTTTaGGCATCAACACCAAGGACA +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVAPSLF*ASTPRT
Trigger: TGTCCTTGGTGTTGATGCCCAAAATAGAGAAGGTGC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGGTGGCAAACAATGTCTaGATCCGTACACCACCGCTG +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMVANNV*IRTPPL
Trigger: CAGCGGTGGTGTACGGATCCAGACATTGTTTGCCAC...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCTGATCTCGAACTCCTaGCTTCAGGTGATTCACCCA +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLISNS*LQVIHP
Trigger: TGGGTGAATCACCTGAAGTCAGGAGTTCGAGATCAG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCTGATCTCGAACTCCTaGCTTCAGGTGATTCACCCA +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNLISNS*LQVIHP
Trigger: TGGGTGAATCACCTGAAGTCAGGAGTTCGAGATCAG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCATTGCTGGTACATCTaGGAAGAACACCTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSHCWYI*EEHLLL
Trigger: GAGCAGGAGGTGTTCTTCTCAGATGTACCAGCAATG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGACAGAAAAGTATCCTaGAGGACACCTACTGGAGCG +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSDRKVS*RTPTGA
Trigger: CGCTCCAGTAGGTGTCCTTCAGGATACTTTTCTGTC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACACAATCTCAGCTCACTaGAACTTTTGCCTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNTISAH*NFCLPG
Trigger: GCCAGGGAGGCAAAAGTTGCAGTGAGCTGAGATTGT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGATGCTAAGGCCTCGGTaGCACCTCCCTAAGGTTTTA +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMMLRPR*HLPKVL
Trigger: TAAAACCTTAGGGAGGTGGCACCGAGGCCTTAGCAT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCGCAGCCATGCTGGTTaGACACTGCCATTTTCTACA +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSRSHAG*TLPFST
Trigger: TGTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTTGGGAGGTGAGGCATaGAGATCACTTGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLGGEA*RSLEVK
Trigger: CTTGACCTCAAGTGATCTGCATGCCTCACCTCCCAA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTTGGTGAGTGGGCCTTaGACTGTACTTCACAATCCC +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLVSGP*TVLHNP
Trigger: GGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTTCTCTGGAGGGAGCTaGGCGACGATACTACTAAAC +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNFSGGS*ATILLN
Trigger: GTTTAGTAGTATCGTCGCCCAGCTCCCTCCAGAGAA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCACAGCTATGAAGAATaGGGCTGCTCCACATATGCT +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSHSYEE*GCSTYA
Trigger: AGCATATGTGGAGCAGCCTCATTCTTCATAGCTGTG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTCCTGGCTAACACGGTaGAACCCAGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSSWLTR*NPVSTK
Trigger: TTTAGTAGAGACTGGGTTTCACCGTGTTAGCCAGGA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGCCCAGAGAAAGGGTTaGTTTGTGGTTGCCTATGTA +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSAQRKG*FVVAYV
Trigger: TACATAGGCAACCACAAATCAACCCTTTCTCTGGGC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCTCAACCACCTAAGATaGGACTTCTGGGCAATGTCT +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLNHLR*DFWAMS
Trigger: AGACATTGCCCAGAAGTCTCATCTTAGGTGGTTGAG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTGTGCCTGCTGGTCCTaGTTTGTTTCCACATCATCT +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMCACWS*FVSTSS
Trigger: AGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAGGCGTGAGTCACCATaGCCAGCAAAGAAGTATGTT +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNRRESP*PAKKYV
Trigger: AACATACTTCTTTGCTGGGCATGGTGACTCACGCCT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCATTACCCCTCTTGGATaGATCTGCAACAAGCACTCC +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSITPLG*ICNKHS
Trigger: GGAGTGCTTGTTGCAGATGCATCCAAGAGGGGTAAT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCAGTTTCACTCTTTGTTaGCCAGGTGGGAGTGCAATG +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSSFTLC*PGGSAM
Trigger: CATTGCACTCCCACCTGGGCAACAAAGAGTGAAACT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCATTCTCTCTGCTGCTaGCATGTAAGATGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSHSLCC*HVRCAL
Trigger: CAAGGCACATCTTACATGGCAGCAGCAGAGAGAATG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTGTCACCCTCAATCATaGCAGGCGTTGTCGAATTCT +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSCHPQS*QALSNS
Trigger: AGAATTCGACAACGCCTGGCATGATTGAGGGTGACA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGATGGTCACCCTATTCTaGTATCAAGCATTAGAACTC +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVMVTLF*YQALEL
Trigger: GAGTTCTAATGCTTGATAGCAGAATAGGGTGACCAT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGCTGTAAGGCTCACTTaGTTTTCAGTAGTCAACCCG +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSAVRLT*FSVVNP
Trigger: CGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGGGAAGAACCTGAAATaGTGTGTACCAAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNGKNLK*CVPRRQ
Trigger: TTGCCTCCTTGGTACACACCATTTCAGGTTCTTCCC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGGGAAGAACCTGAAATaGTGTGTACCAAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: KRKKSLLSETVSGGINRLGKNLK*CVPRRQ
Trigger: TTGCCTCCTTGGTACACACCATTTCAGGTTCTTCCC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGACAATTACAAGACCATaGGGTCACGACCACAGAAGC +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMTITRP*GHDHRS
Trigger: GCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGCGCAATTACCCCTCTTaGATGCATCTGCAACAAGCA +
Preference number: 2 (lower is better)
Translates to: KRKKSLLSETVSGGINRLRNYPS*MHLQQA
Trigger: TGCTTGTTGCAGATGCATCCAAGAGGGGTAATTGCG...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTTTGGGAGGTCAAGATaGGAGGATCACTTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNFGRSR*EDHLRQ
Trigger: TTGCCTCAAGTGATCCTCCCATCTTGACCTCCCAAA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp TGGGAAACATGTAGAGCTAAATATGAGCTCAGGTCAATATTAAAATaGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAG +
Preference number: 2 (lower is better)
Translates to: WETCRAKYELRSILK*EVGHRIPTPHIWIQ
Trigger: CTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAATTTTAATATTGACCTGAGCTCATATTTAGCTCTACATGTTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTCACCAGGCTTTTTCTaGACTTCCAGCTCCATTAAC +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMSPGFF*TSSSIN
Trigger: GTTAATGGAGCTGGAAGTTCAGAAAAAGCCTGGTGA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGATGTTTCTCAAGAAGTaGAAGGCCAAGGGTCACTTC +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMMFLKK*KAKGHF
Trigger: GAAGTGACCCTTGGCCTTTCACTTCTTGAGAAACAT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAGAAAGGGAAGAACCTaGAATGGTGTGTACCAAGGA +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNRKGRT*NGVYQG
Trigger: TCCTTGGTACACACCATTTCAGGTTCTTCCCTTTCT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCACCTGCACGAAGCTATaGACTATTTCCTCATCCCTT +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSTCTKL*TISSSL
Trigger: AAGGGATGAGGAAATAGTTCATAGCTTCGTGCAGGT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAGGAATCAGAAGTGCTaGCTTTTCTGTGGTCTGATG +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNRNQKC*LFCGLM
Trigger: CATCAGACCACAGAAAAGGCAGCACTTCTGATTCCT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTTAAATTCAGTGACATaGATCCTTGGCAGAGAAGAT +
Preference number: 2 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVLNSVT*ILGRED
Trigger: ATCTTCTCTGCCAAGGATGCATGTCACTGAATTTAA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGACAGAAGAGGATTACTaGTTCCTGCTTTCCTTAGCG +
Preference number: 2 (lower is better)
Translates to: KRKKSLLSETVSGGINRLTEEDY*FLLSLA
Trigger: CGCTAAGGAAAGCAGGAACCAGTAATCCTCTTCTGT...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTGTACTTGTAGGCTTTaGAAAGCATGGAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMCTCRL*KAWRGF
Trigger: GAAACCCCTCCATGCTTTCCAAAGCCTACAAGTACA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCAATTACCCAGTCTCTaGTACTTCTCTAAAGCAGTG +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSQLPSL*YFSKAV
Trigger: CACTGCTTTAGAGAAGTATCAGAGACTGGGTAATTG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTGCTCTACGCTTCCTTaGACAGAAACTCATAAGATG +
Preference number: 2 (lower is better)
Translates to: KRKKSLLSETVSGGINRLCSTLP*TETHKM
Trigger: CATCTTATGAGTTTCTGTGCAAGGAAGCGTAGAGCA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTCTTCACCAAGTCTCTaGTATTATCTGACACCTGTC +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNSSPSL*YYLTPV
Trigger: GACAGGTGTCAGATAATAGCAGAGACTTGGTGAAGA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTCACCAAGAAGATaGAATGTTTCATGGACACAG +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSPSPRR*NVSWTQ
Trigger: CTGTGTCCATGAAACATTCCATCTTCTTGGTGAAGG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCTCATAAGATGCTTGTaGCTGGTGAGAAAACAACAC +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNLIRCL*LVRKQH
Trigger: GTGTTGTTTTCTCACCAGCCACAAGCATCTTATGAG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGGTAATTATTTCTGAGTaGTGGGATCACGAGTCCTGT +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMVIISE*WDHESC
Trigger: ACAGGACTCGTGATCCCACCACTCAGAAATAATTAC...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp CAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTaGGTGATTTCACAGCACTTTCATATGCAATCTGTTTACAGCTAT +
Preference number: 2 (lower is better)
Translates to: QKENNYYRLNCSTQP*VISQHFHMQSVYSY
Trigger: ATAGCTGTAAACAGATTGCATATGAAAGTGCTGTGAAATCACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGGACCCGAGATTAAATaGCTTATGCAAAGTTATAGG +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNGPEIK*LMQSYR
Trigger: CCTATAACTTTGCATAAGTCATTTAATCTCGGGTCC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGGGTTTTATTGTTCACTaGCTTCAAAACCCATGTCTC +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMGFIVH*LQNPCL
Trigger: GAGACATGGGTTTTGAAGGCAGTGAACAATAAAACC...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCAGAAACTCATAAGATaGTTGTGGCTGGTGAGAAAA +
Preference number: 2 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNQKLIR*LWLVRK
Trigger: TTTTCTCACCAGCCACAAGCATCTTATGAGTTTCTG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGTATCTGTTCTATGTTaGATGCTTCAGAACCCTGTA +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSVSVLC*MLQNPV
Trigger: TACAGGGTTCTGAAGCATGCAACATAGAACAGATAC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCATAATAACTAGCACCTaGTCACTACATGCTATGCAC +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSIITST*SLHAMH
Trigger: GTGCATAGCATGTAGTGAGCAGGTGCTAGTTATTAT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGATTATTTCTGAGTGGTaGGATCACGAGTCCTGTATT +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMIISEW*DHESCI
Trigger: AATACAGGACTCGTGATCCCACCACTCAGAAATAAT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGGCTGCCAAGAGGGTTaGGTGTTTACATTTATTTTT +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSGCQEG*VFTFIF
Trigger: AAAAATAAATGTAAACACCCAACCCTCTTGGCAGCC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCAAAAAGATACAAACTTaGGCATTATGGGTCTGGGAC +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSKKIQT*ALWVWD
Trigger: GTCCCAGACCCATAATGCCCAAGTTTGTATCTTTTT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 90 bp CCATTAGATTATCTAGATTCAGGTACTTGTCATATGTATTTAACTTaGGTTAGCCCCAAGTACCTTACATACATTCACCCATGTGTCTCA +
Preference number: 2 (lower is better)
Translates to: PLDYLDSGTCHMYLT*VSPKYLTYIHPCVS
Trigger: TGAGACACATGGGTGAATGTATGTAAGGTACTTGGGGCTAACCAAAGTTAAATACATATGACAAGTACCTGAATCTAGATAATCTAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTTAAATTCAGTGACATaGATCCTTGGCAGAGAAGAT +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLNSVT*ILGRED
Trigger: ATCTTCTCTGCCAAGGATGCATGTCACTGAATTTAA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGACGAGCAGAAAAATTTaGGCATTACACAAACAACAG +
Preference number: 2 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMTSRKI*ALHKQQ
Trigger: CTGTTGTTTGTGTAATGCCCAAATTTTTCTGCTCGT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTACAGACTTGAACCATaGCCTAAGGATTTAATTCTA +
Preference number: 2 (lower is better)
Translates to: KRKKSLLSETVSGGINRLYRLEP*PKDLIL
Trigger: TAGAATTAAATCCTTAGGGCATGGTTCAAGTCTGTA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCAATAAGAAGGAACACTaGATGGTTACTAACATGGAT +
Preference number: 2 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSNKKEH*MVTNMD
Trigger: ATCCATGTTAGTAACCATGCAGTGTTCCTTCTTATT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp AACAATGTCTGGATCCGTACACCACCGCTGGAGGAATaGAGAGGCGGGCGGGGGCGCGACAGGCTGCTAGGC +
Preference number: 3 (lower is better)
Translates to: NNVWIRTPPLEE*RGGRGRDRLLG
Trigger: GCCTAGCAGCCTGTCGCGCCCCCGCCCGCCTCTGCATTCCTCCAGCGGTGGTGTACGGATCCAGACATTGTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp TGGGAGGGAGGAAAGCAGAGGACGGCACAGGGAGGCTaGGAGGGAGGAAGGAAAGCAGACGACGGCACAGGG +
Preference number: 3 (lower is better)
Translates to: WEGGKQRTAQGG*EGGRKADDGTG
Trigger: CCCTGTGCCGTCGTCTGCTTTCCTTCCTCCCTCCCAGCCTCCCTGTGCCGTCCTCTGCTTTCCTCCCTCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp AGGTGGCAAACAATGTCTGGATCCGTACACCACCGCTaGAGGAATGCAGAGGCGGGCGGGGGCGCGACAGGC +
Preference number: 3 (lower is better)
Translates to: RWQTMSGSVHHR*RNAEAGGGATG
Trigger: GCCTGTCGCGCCCCCGCCCGCCTCTGCATTCCTCCAGCGGTGGTGTACGGATCCAGACATTGTTTGCCACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp GTGAGGCCAAAGTCCATCGGCCCCACGGCTTTTCCGTaGTGGGAGGGAGGAAAGCAGAGGACGGCACAGGGA +
Preference number: 3 (lower is better)
Translates to: VRPKSIGPTAFP*WEGGKQRTAQG
Trigger: TCCCTGTGCCGTCCTCTGCTTTCCTCCCTCCCAGCACGGAAAAGCCGTGGGGCCGATGGACTTTGGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAGCCAAGGGACAAGTTaGCAGGGCGGGAGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGSQGTS*QGGREG
Trigger: CCCTTCCCTCCCGCCCTGCAAACTTGTCCCTTGGCT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CCCGCCGGACAGAGATGTCAGAGCCCACAGAGGGACTaGGAATGGGTAGGATGTCTCTGGTGGGGCGACCAA +
Preference number: 3 (lower is better)
Translates to: PAGQRCQSPQRD*EWVGCLWWGDQ
Trigger: TTGGTCGCCCCACCAGAGACATCCTACCCATTCCCAGTCCCTCTGTGGGCTCTGACATCTCTGTCCGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp ATGTATTCAGTTTCCAAAGGTGCTAGGCCAGGGCGGTaGGGCCGACCTTGGCCAGGCCGTGGGTGGGTTGCT +
Preference number: 3 (lower is better)
Translates to: MYSVSKGARPGR*GRPWPGRGWVA
Trigger: AGCAACCCACCCACGGCCTGGCCAAGGTCGGCCTCACCGCCCTGGCCTAGCACCTTTGGAAACTGAATACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp AGGCAGCAAGACACAGTGCACTCCGCGAGATTAGGCTaGTCCCATTTCCCCAGGGGCGCCTGTGGATGTGTC +
Preference number: 3 (lower is better)
Translates to: RQQDTVHSARLG*SHFPRGACGCV
Trigger: GACACATCCACAGGCGCCCCTGGGGAAATGGGACCAGCCTAATCTCGCGGAGTGCACTGTGTCTTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp GTGAACTGGCCTGCTTGTATCTCCCCTCGGCGGCAGTaGTGGTTGCCAGCCTGGCTTGCGTTTGCCCAAAAG +
Preference number: 3 (lower is better)
Translates to: VNWPACISPRRQ*WLPAWLAFAQK
Trigger: CTTTTGGGCAAACGCAAGCCAGGCTGGCAACCACCACTGCCGCCGAGGGGAGATACAAGCAGGCCAGTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTGTGAACTGGCCTGCTaGTATCTCCCCTCGGCGGCA +
Preference number: 3 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSCELAC*YLPSAA
Trigger: TGCCGCCGAGGGGAGATACAAGCAGGCCAGTTCACA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp GGGGCACTGTTCTGGAGGTGCTGTGCCTGCTGGTCCTaGTTTGTTTCCACATCATCTACCGCGACCAGCCGA +
Preference number: 3 (lower is better)
Translates to: GALFWRCCACWS*FVSTSSTATSR
Trigger: TCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACAGCACCTCCAGAACAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp GGGCCTTGGACTGTACTTCACAATCCCATCTTCACCTaGAGTTGTCCGGCCAACATGGCCCCTTCCCGCCTG +
Preference number: 3 (lower is better)
Translates to: GPWTVLHNPIFT*SCPANMAPSRL
Trigger: CAGGCGGGAAGGGGCCATGTTGGCCGGACAACTGCAGGTGAAGATGGGATTGTGAAGTACAGTCCAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CATCAACACCAAGGACACAGTGCAGGGCAGCCTGCTTaGCCTCTGGGTAGAGAAAGGCCAGCCCCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: HQHQGHSAGQPA*PLGRERPAPAE
Trigger: TTCTGCAGGGGCTGGCCTTTCTCTACCCAGAGGCCAAGCAGGCTGCCCTGCACTGTGTCCTTGGTGTTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp ACAATCCCATCTTCACCTGCAGTTGTCCGGCCAACATaGCCCCTTCCCGCCTGCCCTTTCCTAACCACCTCC +
Preference number: 3 (lower is better)
Translates to: TIPSSPAVVRPT*PLPACPFLTTS
Trigger: GGAGGTGGTTAGGAAAGGGCAGGCGGGAAGGGGCCATGTTGGCCGGACAACTGCAGGTGAAGATGGGATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGCGGTGAGGCCGACCTaGGCCAGGCCGTGGGTGGGT +
Preference number: 3 (lower is better)
Translates to: VKLFPTEMVSHSSISACVAVRPT*ARPWVG
Trigger: ACCCACCCACGGCCTGGCCAAGGTCGGCCTCACCGC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp GCGGTGAGGCCGACCTTGGCCAGGCCGTGGGTGGGTTaGTTGACTAGGCCAGAGAGTAAATCAGTAGAATTC +
Preference number: 3 (lower is better)
Translates to: AVRPTLARPWVG*LTRPESKSVEF
Trigger: GAATTCTACTGATTTACTCTCTGGCCTAGTCAAGCAACCCACCCACGGCCTGGCCAAGGTCGGCCTCACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CAAGGGGAGCGAGCTGTAGCTGTGATGGTGGGCAGCTaGAAGGCCGCACATATAATCAACAGGGGACCCACA +
Preference number: 3 (lower is better)
Translates to: QGERAVAVMVGS*KAAHIINRGPT
Trigger: TGTGGGTCCCCTGTTGATTATATGTGCGGCCTTCCAGCTGCCCACCATCACAGCTACAGCTCGCTCCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTGGGGTTTCACCATGTaGGCCAGGCAGGTTTTGAAC +
Preference number: 3 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSWGFTM*ARQVLN
Trigger: GTTCAAAACCTGCCTGGCCAACATGGTGAAACCCCA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCTGGTGCGGGTCTTATaGCTCACCAACTCTTGCTGC +
Preference number: 3 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWLVRVL*LTNSCC
Trigger: GCAGCAAGAGTTGGTGAGCAATAAGACCCGCACCAG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp CCGGTGGTTCTGAAAACCACACCCCAGCCTGAACAGTaGGAAGGCTCCTGCAGCTTCAAGCGCATGGCAAGA +
Preference number: 3 (lower is better)
Translates to: PVVLKTTPQPEQ*EGSCSFKRMAR
Trigger: TCTTGCCATGCGCTTGAAGCTGCAGGAGCCTTCTCACTGTTCAGGCTGGGGTGTGGTTTTCAGAACCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp GTGTACCAAGGAGGCAAGGATACAGGCAGAACCTGGTaGAACAGCCAAGGGACAAGTTTGCAGGGCGGGAGG +
Preference number: 3 (lower is better)
Translates to: VYQGGKDTGRTW*NSQGTSLQGGR
Trigger: CCTCCCGCCCTGCAAACTTGTCCCTTGGCTGTTTCACCAGGTTCTGCCTGTATCCTTGCCTCCTTGGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp GAAAGGCCAGCCCCTGCAGAAAGCCCTTCTTCATCCTaGCAGCACAGCAGTGCTCTACGCTTCCTTGCACAG +
Preference number: 3 (lower is better)
Translates to: ERPAPAESPSSS*QHSSALRFLAQ
Trigger: CTGTGCAAGGAAGCGTAGAGCACTGCTGTGCTGTCAGGATGAAGAAGGGCTTTCTGCAGGGGCTGGCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp TTTCCACATCATCTACCGCGACCAGCCGAAGTAGGGTaGAAAGGAGAGGGCACCCAGGCAGCAAGACACAGT +
Preference number: 3 (lower is better)
Translates to: FPHHLPRPAEVG*KGEGTQAARHS
Trigger: ACTGTGTCTTGCTGCCTGGGTGCCCTCTCCTTTGCACCCTACTTCGGCTGGTCGCGGTAGATGATGTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp GAGGGAGGAAGGAAAGCAGACGACGGCACAGGGAGGTaGCCTACTCGCGGTTCATGTCATCACTTTCGCTTT +
Preference number: 3 (lower is better)
Translates to: EGGRKADDGTGR*PTRGSCHHFRF
Trigger: AAAGCGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCTTTCCTTCCTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp AGGGGCAGAAAGAATTCTTTGAGTAAGCCTGGAAGGTaGAGGGGCTCACCAGGCCAAGAGCAGGTGCTAGGC +
Preference number: 3 (lower is better)
Translates to: RGRKNSLSKPGR*RGSPGQEQVLG
Trigger: GCCTAGCACCTGCTCTTGGCCTGGTGAGCCCCTCCACCTTCCAGGCTTACTCAAAGAATTCTTTCTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAGCACCTTCTCTATTTaGGGCATCAACACCAAGGAC +
Preference number: 3 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGSTFSI*GINTKD
Trigger: GTCCTTGGTGTTGATGCCCAAAATAGAGAAGGTGCT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGACGCAATTACCCCTCTaGGATGCATCTGCAACAAGC +
Preference number: 3 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSTQLPL*DASATS
Trigger: GCTTGTTGCAGATGCATCCAAGAGGGGTAATTGCGT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp TTACAAGACCATGGGGTCACGACCACAGAAGCGATATaGAACAGGTCCCGGGACACAGGGAGGGGCAGAAAG +
Preference number: 3 (lower is better)
Translates to: LQDHGVTTTEAI*NRSRDTGRGRK
Trigger: CTTTCTGCCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp GCAGCAGCCGCAATCAAGAGATCACCAAAGAGGAGGTaGATCATGGGACAAATTCCCCTGGGAGGGGTGGAG +
Preference number: 3 (lower is better)
Translates to: AAAAIKRSPKRR*IMGQIPLGGVE
Trigger: CTCCACCCCTCCCAGGGGAATTTGTCCCATGATTCACCTCCTCTTTGGTGATCTCTTGATTGCGGCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp GAAGACGCTGAGCTCGCAGCCATGCTGGTTGCACACTaGCATTTTCTACAGGTTCTCAAGTGCATGGGCTGC +
Preference number: 3 (lower is better)
Translates to: EDAELAAMLVAH*HFLQVLKCMGC
Trigger: GCAGCCCATGCACTTGAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCGAGCTCAGCGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCCTGTCCGTCCCACCTaGGATAGTACAAAAGTGACA +
Preference number: 3 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWPVRPT*DSTKVT
Trigger: TGTCACTTTTGTACTATCCAAGGTGGGACGGACAGG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp GAAGATACAGAGGTACGAAGAAGGTCAAGCGAAGACTaGGGCAGGGATTGGAGTGATGCTGTCGCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: EDTEVRRRSSED*GRDWSDAVAGQ
Trigger: CTGGCCTGCGACAGCATCACTCCAATCCCTGCCTCAGTCTTCGCTTGACCTTCTTCGTACCTCTGTATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTGTGAACTGGCCTGCTaGTATCTCCCCTCGGCGGCA +
Preference number: 3 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPCELAC*YLPSAA
Trigger: TGCCGCCGAGGGGAGATACAAGCAGGCCAGTTCACA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp CCACTCTCTCTAGTGAAGACGCTGAGCTCGCAGCCATaGTGGTTGCACACTGCCATTTTCTACAGGTTCTCA +
Preference number: 3 (lower is better)
Translates to: PLSLVKTLSSQP*WLHTAIFYRFS
Trigger: TGAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCGAGCTCAGCGTCTTCACTAGAGAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp AGGCAAGAGAATCGCTTGAACCTAGGAAGTGGATGTTaGAGTGTGTCGAGATCATGCCACTGCCCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: RQENRLNLGSGC*SVSRSCHCPPA
Trigger: AGCTGGAGGGCAGTGGCATGATCTCGACACACTGCAACATCCACTTCCTAGGTTCAAGCGATTCTCTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp GATGTGCCTTGCTTCCCCTTTGCCTTCCACTATGACTaGTTGTTTCCTGAGGCCTCACAGCCATGCAGAACT +
Preference number: 3 (lower is better)
Translates to: DVPCFPFAFHYD*LFPEASQPCRT
Trigger: AGTTCTGCATGGCTGTGAGGCCTCAGGAAACAAGCAGTCATAGTGGAAGGCAAAGGGGAAGCAAGGCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp ATGAGACTTCTGGGCAATGTCTCCTCAGCCATCATCTaGCGTGATGTGTCACCCTCAATCATGCCAGGCGTT +
Preference number: 3 (lower is better)
Translates to: MRLLGNVSSAII*RDVSPSIMPGV
Trigger: AACGCCTGGCATGATTGAGGGTGACACATCACGGCAGATGATGGCTGAGGAGACATTGCCCAGAAGTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp ATCTGGAGGGATAAACAGACTGGCAAGGGTTGCCTCTaGGCAAGAAACTGGGGAATAGAGAGCGGGAGTAGA +
Preference number: 3 (lower is better)
Translates to: IWRDKQTGKGCL*ARNWGIESGSR
Trigger: TCTACTCCCGCTCTCTATTCCCCAGTTTCTTGCCCAGAGGCAACCCTTGCCAGTCTGTTTATCCCTCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp GTTTTATCAAGAGGCCTAGAGGTGGCAAACAATGTCTaGATCCGTACACCACCGCTGGAGGAATGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: VLSRGLEVANNV*IRTPPLEECRG
Trigger: GCCTCTGCATTCCTCCAGCGGTGGTGTACGGATCCAGACATTGTTTGCCACCTCTAGGCCTCTTGATAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CCCAACCCCACATATTTGGATCCAGCCCTTGGTGAGTaGGCCTTGGACTGTACTTCACAATCCCATCTTCAC +
Preference number: 3 (lower is better)
Translates to: PNPTYLDPALGE*ALDCTSQSHLH
Trigger: GTGAAGATGGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTTGCTTCCTACAGACTaGAACCATGCCCTAAGGATT +
Preference number: 3 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWLLPTD*NHALRI
Trigger: AATCCTTAGGGCATGGTTCAAGTCTGTAGGAAGCAA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTATCTACCTCGCTGGCTaGAACCCAAGAGGAGGGTGC +
Preference number: 3 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPIYLAG*NPRGGC
Trigger: GCACCCTCCTCTTGGGTTCAAGCCAGCGAGGTAGAT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAATCTACCTCGCTGGCTaGAACCCAAGAGGAGGGTGC +
Preference number: 3 (lower is better)
Translates to: VKLFPTEMVSHSSISACVIYLAG*NPRGGC
Trigger: GCACCCTCCTCTTGGGTTCAAGCCAGCGAGGTAGAT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAACAGACTGGCAAGGGTaGCCTCTGGGCAAGAAACTG +
Preference number: 3 (lower is better)
Translates to: VKLFPTEMVSHSSISACVTDWQG*PLGKKL
Trigger: CAGTTTCTTGCCCAGAGGCAACCCTTGCCAGTCTGT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACCCAACCCCACATATTaGGATCCAGCCCTTGGTGAG +
Preference number: 3 (lower is better)
Translates to: VKLFPTEMVSHSSISACVPNPTY*DPALGE
Trigger: CTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACTGGTGCGGGTCTTATaGCTCACCAACTCTTGCTGC +
Preference number: 3 (lower is better)
Translates to: VKLFPTEMVSHSSISACVLVRVL*LTNSCC
Trigger: GCAGCAAGAGTTGGTGAGCAATAAGACCCGCACCAG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp GGCTTGCGTTTGCCCAAAAGTAATAGTAAAGAGCTCTaGCCACTGCTGCTCACCCTAAACTTGGGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: GLRLPKSNSKEL*PLLLTLNLGLL
Trigger: CAGCAGCCCCAAGTTTAGGGTGAGCAGCAGTGGTCAGAGCTCTTTACTATTACTTTTGGGCAAACGCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp GAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTaGGTGGGCCTTGGACTGTACTTCACAATCCCATCT +
Preference number: 3 (lower is better)
Translates to: ESQPHIFGSSPW*VGLGLYFTIPS
Trigger: AGATGGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp GCTGTCTCTAAAATGATAATATCTACCTCGCTGGCTTaGACCCAAGAGGAGGGTGCAGTGAGCCGAGATCGC +
Preference number: 3 (lower is better)
Translates to: AVSKMIISTSLA*TQEEGAVSRDR
Trigger: GCGATCTCGGCTCACTGCACCCTCCTCTTGGGTTCAAGCCAGCGAGGTAGATATTATCATTTTAGAGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp ACACAAGAAAGATCTCTTCATTTCCAGGCACCCCATTaGTGGGGTGAGCCCATGAAGTCCAGAGAGCAAACG +
Preference number: 3 (lower is better)
Translates to: TQERSLHFQAPH*WGEPMKSREQT
Trigger: CGTTTGCTCTCTGGACTTCATGGGCTCACCCCAGCAATGGGGTGCCTGGAAATGAAGAGATCTTTCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CTCTCTCTAGTGAAGACGCTGAGCTCGCAGCCATGCTaGTTGCACACTGCCATTTTCTACAGGTTCTCAAGT +
Preference number: 3 (lower is better)
Translates to: LSLVKTLSSQPC*LHTAIFYRFSS
Trigger: ACTTGAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCGAGCTCAGCGTCTTCACTAGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CCACATATTTGGATCCAGCCCTTGGTGAGTGGGCCTTaGACTGTACTTCACAATCCCATCTTCACCTGCAGT +
Preference number: 3 (lower is better)
Translates to: PHIWIQPLVSGP*TVLHNPIFTCS
Trigger: ACTGCAGGTGAAGATGGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp TTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTaGATCCAGCCCTTGGTGAGTGGGCCTTGGACTGTA +
Preference number: 3 (lower is better)
Translates to: LEVGHRIPTPHI*IQPLVSGPWTV
Trigger: TACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CACCAAAGAGGAGGTGAATCATGGGACAAATTCCCCTaGGAGGGGTGGAGCTTTAAACCAACATCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: HQRGGESWDKFP*EGWSFKPTSGR
Trigger: TCTGCCTGATGTTGGTTTAAAGCTCCACCCCTCCCAGGGGAATTTGTCCCATGATTCACCTCCTCTTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CAGAGTTCCAATATCCAGGATGCTGCTCCAGGATGGTaGGTGTTACAGATGGAGGTCATGATGTTGAGGGAG +
Preference number: 3 (lower is better)
Translates to: QSSNIQDAAPGW*VLQMEVMMLRE
Trigger: CTCCCTCAACATCATGACCTCCATCTGTAACACCCACCATCCTGGAGCAGCATCCTGGATATTGGAACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACTTGGTGAGTGGGCCTaGGACTGTACTTCACAATCC +
Preference number: 3 (lower is better)
Translates to: VKLFPTEMVSHSSISACVLGEWA*DCTSQS
Trigger: GGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp CTTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTaGTACAGAATTAGATCAGCTCTGGGGAGCACAGTG +
Preference number: 3 (lower is better)
Translates to: LQAHGKTMGTAY*YRIRSALGSTV
Trigger: CACTGTGCTCCCCAGAGCTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp AGCAAGACTTGGCCAGGACAACCTGGAAAATTGAGCTaGAGACCAAGAGGCACCAGGCAAGATCACTTTACC +
Preference number: 3 (lower is better)
Translates to: SKTWPGQPGKLS*RPRGTRQDHFT
Trigger: GGTAAAGTGATCTTGCCTGGTGCCTCTTGGTCTTCAGCTCAATTTTCCAGGTTGTCCTGGCCAAGTCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp GAGGCACAGGAAAGATTATTTGAAGGTCAAAGCAGGTaGGTCAAGATACAAACTCAGGCCGGGTGTGGTGGC +
Preference number: 3 (lower is better)
Translates to: EAQERLFEGQSR*VKIQTQAGCGG
Trigger: GCCACCACACCCGGCCTGAGTTTGTATCTTGACTCACCTGCTTTGACCTTCAAATAATCTTTCCTGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp AAGTGCTGCCTTTTCTGTGGTCTGATGTTCACAAGATaGTGGGTTCTACCACTCCAACTCTCCCCTCCTTAC +
Preference number: 3 (lower is better)
Translates to: KCCLFCGLMFTR*WVLPLQLSPPY
Trigger: GTAAGGAGGGGAGAGTTGGAGTGGTAGAACCCAGCATCTTGTGAACATCAGACCACAGAAAAGGCAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp GAAGGCTCCTGCAGCTTCAAGCGCATGGCAAGACCATaGGAACAGCCTATTGATACAGAATTAGATCAGCTC +
Preference number: 3 (lower is better)
Translates to: EGSCSFKRMARP*EQPIDTELDQL
Trigger: GAGCTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAAGCTGCAGGAGCCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CTGAACAGTGAGAAGGCTCCTGCAGCTTCAAGCGCATaGCAAGACCATGGGAACAGCCTATTGATACAGAAT +
Preference number: 3 (lower is better)
Translates to: LNSEKAPAASSA*QDHGNSLLIQN
Trigger: ATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAAGCTGCAGGAGCCTTCTCACTGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CCAGCAAATCCACTGTTGATACGCAATTACCCCTCTTaGATGCATCTGCAACAAGCACTCCCCAGCTTCGAA +
Preference number: 3 (lower is better)
Translates to: PANPLLIRNYPS*MHLQQALPSFE
Trigger: TTCGAAGCTGGGGAGTGCTTGTTGCAGATGCATCCAAGAGGGGTAATTGCGTATCAACAGTGGATTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp AGGAATCTTGCCTACAGCCTTCAGAGGCAGAGGCTTTaGCTGACTTCTGGCCTTCAGAGCTGTGAGATAATA +
Preference number: 3 (lower is better)
Translates to: RNLAYSLQRQRL*LTSGLQSCEII
Trigger: TATTATCTCACAGCTCTGAAGGCCAGAAGTCAGCCAAAGCCTCTGCCTCTGAAGGCTGTAGGCAAGATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CCGCAATCAAGAGATCACCAAAGAGGAGGTGAATCATaGGACAAATTCCCCTGGGAGGGGTGGAGCTTTAAA +
Preference number: 3 (lower is better)
Translates to: PQSRDHQRGGES*DKFPWEGWSFK
Trigger: TTTAAAGCTCCACCCCTCCCAGGGGAATTTGTCCCATGATTCACCTCCTCTTTGGTGATCTCTTGATTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp CTTCAGAGTTCCAATATCCAGGATGCTGCTCCAGGATaGTGGGTGTTACAGATGGAGGTCATGATGTTGAGG +
Preference number: 3 (lower is better)
Translates to: LQSSNIQDAAPG*WVLQMEVMMLR
Trigger: CCTCAACATCATGACCTCCATCTGTAACACCCACCATCCTGGAGCAGCATCCTGGATATTGGAACTCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp TTCATTTCCAGGCACCCCATTGCTGGGGTGAGCCCATaGAGTCCAGAGAGCAAACGATATCTTACCATTAGA +
Preference number: 3 (lower is better)
Translates to: FISRHPIAGVSP*SPESKRYLTIR
Trigger: TCTAATGGTAAGATATCGTTTGCTCTCTGGACTTCATGGGCTCACCCCAGCAATGGGGTGCCTGGAAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp TTACTTGGCCTCTTACATGGATGGCCTCATTCCAGGTaGTATGGGGGAGATAAGAACAGAAATCCTGGTACC +
Preference number: 3 (lower is better)
Translates to: LLGLLHGWPHSR*YGGDKNRNPGT
Trigger: GGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATGAGGCCATCCATGTAAGAGGCCAAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp TCCATCAAGCCACCTCTTCATCCCACATACACACCCTaGCCAGCCTCTAGTAATTGTCATTCTACTCTCTAC +
Preference number: 3 (lower is better)
Translates to: SIKPPLHPTYTP*PASSNCHSTLY
Trigger: GTAGAGAGTAGAATGACAATTACTAGAGGCTGGGCAGGGTGTGTATGTGGGATGAAGAGGTGGCTTGATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTAGCTGTAAGGCTCACTaGGTTTTCAGTAGTCAACCC +
Preference number: 3 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGSCKAH*VFSSQP
Trigger: GGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTCAGAGGCAGAGGCTTaGGCTGACTTCTGGCCTTCA +
Preference number: 3 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSEAEA*ADFWPS
Trigger: TGAAGGCCAGAAGTCAGCCAAAGCCTCTGCCTCTGA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCACTATCTGTCCTGCTaGCACCCACCTCCACCCAGG +
Preference number: 3 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSHYLSC*HPPPPR
Trigger: CCTGGGTGGAGGTGGGTGCAAGCAGGACAGATAGTG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCACTATCTGTCCTGCTaGCACCCACCTCCACCCAGG +
Preference number: 3 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMHYLSC*HPPPPR
Trigger: CCTGGGTGGAGGTGGGTGCAAGCAGGACAGATAGTG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACAGCAAATTACTCCATaGGGGTTAGGCCTTGTTTCT +
Preference number: 3 (lower is better)
Translates to: VKLFPTEMVSHSSISACVQQITP*GLGLVS
Trigger: AGAAACAAGGCCTAACCCCAATGGAGTAATTTGCTG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp CACCATGCCCAGCAAAGAAGTATGTTTCTCAAGAAGTaGAAGGCCAAGGGTCACTTCACCAGGCTTTTTCTG +
Preference number: 3 (lower is better)
Translates to: HHAQQRSMFLKK*KAKGHFTRLFL
Trigger: CAGAAAAAGCCTGGTGAAGTGACCCTTGGCCTTTCACTTCTTGAGAAACATACTTCTTTGCTGGGCATGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp TCACTTTACCCAGCGATAAGAGCTGTAAGGCTCACTTaGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACC +
Preference number: 3 (lower is better)
Translates to: SLYPAIRAVRLT*FSVVNPVVLKT
Trigger: GGTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTTATCGCTGGGTAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp TGCAGGGGATTAAGGGAAGTTGAGGGTGAACCATTTTaGCCACTGGATCACAAACAAATTGGCTCGCCTTTA +
Preference number: 3 (lower is better)
Translates to: CRGLREVEGEPF*PLDHKQIGSPL
Trigger: TAAAGGCGAGCCAATTTGTTTGTGATCCAGTGGCCAAAATGGTTCACCCTCAACTTCCCTTAATCCCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGATCTCTCAGGTGCTTTaGAATCAGACTGCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVISQVL*NQTAVG
Trigger: CCCCACAGCAGTCTGATTCAAAAGCACCTGAGAGAT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp CTCATAAGATGCTTGTGGCTGGTGAGAAAACAACACTaGAACATTTCAGCTCCTCAAATGCTAAGGCCTCGG +
Preference number: 3 (lower is better)
Translates to: LIRCLWLVRKQH*NISAPQMLRPR
Trigger: CCGAGGCCTTAGCATTTGAGGAGCTGAAATGTTTCAGTGTTGTTTTCTCACCAGCCACAAGCATCTTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp TCAGAACCCTGTAGAAACAACCAGCAAATCCACTGTTaGTACGCAATTACCCCTCTTGGATGCATCTGCAAC +
Preference number: 3 (lower is better)
Translates to: SEPCRNNQQIHC*YAITPLGCICN
Trigger: GTTGCAGATGCATCCAAGAGGGGTAATTGCGTATCAACAGTGGATTTGCTGGTTGTTTCTACAGGGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp GATCACAAACAAATTGGCTCGCCTTTAAGGTTTACATaGCTGCAGCAGCCGCAATCAAGAGATCACCAAAGA +
Preference number: 3 (lower is better)
Translates to: DHKQIGSPLRFT*LQQPQSRDHQR
Trigger: TCTTTGGTGATCTCTTGATTGCGGCTGCTGCAGCCATGTAAACCTTAAAGGCGAGCCAATTTGTTTGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTTGGCCAGGCAGGTTTaGAACTCCTGGCCACAAGTG +
Preference number: 3 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLARQV*NSWPQV
Trigger: CACTTGTGGCCAGGAGTTCAAAACCTGCCTGGCCAA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTTGGCCAGGCAGGTTTaGAACTCCTGGCCACAAGTG +
Preference number: 3 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLARQV*NSWPQV
Trigger: CACTTGTGGCCAGGAGTTCAAAACCTGCCTGGCCAA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCACGAGCAGAAAAATTaGGGCATTACACAAACAACA +
Preference number: 3 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGHEQKN*GITQTT
Trigger: TGTTGTTTGTGTAATGCCCAAATTTTTCTGCTCGTG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTAAACTCATAAGATGCTaGTGGCTGGTGAGAAAACAA +
Preference number: 3 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPKLIRC*WLVRKQ
Trigger: TTGTTTTCTCACCAGCCACAAGCATCTTATGAGTTT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAGCACCTTCTCTATTTaGGGCATCAACACCAAGGAC +
Preference number: 3 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSTFSI*GINTKD
Trigger: GTCCTTGGTGTTGATGCCCAAAATAGAGAAGGTGCT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGATTTGGATCCAGCCCTaGGTGAGTGGGCCTTGGACT +
Preference number: 3 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMIWIQP*VSGPWT
Trigger: AGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAAT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCCCAACCCCACATATTaGGATCCAGCCCTTGGTGAG +
Preference number: 3 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMPNPTY*DPALGE
Trigger: CTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAGCCCAGAGAAAGGGTaGATTTGTGGTTGCCTATGT +
Preference number: 3 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSPEKG*ICGCLC
Trigger: ACATAGGCAACCACAAATCAACCCTTTCTCTGGGCT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp ATTAGGGTGGCTCTTAAATTCAGTGACATGCATCCTTaGCAGAGAAGATACAGAGGTACGAAGAAGGTCAAG +
Preference number: 3 (lower is better)
Translates to: IRVALKFSDMHP*QRRYRGTKKVK
Trigger: CTTGACCTTCTTCGTACCTCTGTATCTTCTCTGCCAAGGATGCATGTCACTGAATTTAAGAGCCACCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTGGGGTTTCACCATGTaGGCCAGGCAGGTTTTGAAC +
Preference number: 3 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMWGFTM*ARQVLN
Trigger: GTTCAAAACCTGCCTGGCCAACATGGTGAAACCCCA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTGGGGTTTCACCATGTaGGCCATGCTGATCTCGAAC +
Preference number: 3 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSWGFTM*AMLISN
Trigger: GTTCGAGATCAGCATGGCCAACATGGTGAAACCCCA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGGTTGCCAGCCTGGCTaGCGTTTGCCCAAAAGTAAT +
Preference number: 3 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSGCQPG*RLPKSN
Trigger: ATTACTTTTGGGCAAACGCAAGCCAGGCTGGCAACC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGACAAGAAAAATACTaGCTGTTTTATCAAGAGGCC +
Preference number: 3 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRQEKY*LFYQEA
Trigger: GGCCTCTTGATAAAACAGCAAGTATTTTTCTTGTCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCTTGGTGAGTGGGCCTaGGACTGTACTTCACAATCC +
Preference number: 3 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLGEWA*DCTSQS
Trigger: GGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp TTCTACAAAAGTGCTTTCATTTCTTCACCAAGTCTCTaGTATTATCTGACACCTGTCCGTCCCACCTTGGAT +
Preference number: 3 (lower is better)
Translates to: FYKSAFISSPSL*YYLTPVRPTLD
Trigger: ATCCAAGGTGGGACGGACAGGTGTCAGATAATAGCAGAGACTTGGTGAAGAAATGAAAGCACTTTTGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CCA 72 bp TTCAACAAATCTTTATTACTTGGCCTCTTACATGGATaGCCTCATTCCAGGTGCTATGGGGGAGATAAGAAC +
Preference number: 3 (lower is better)
Translates to: FNKSLLLGLLHG*PHSRCYGGDKN
Trigger: GTTCTTATCTCCCCCATAGCACCTGGAATGAGGCCATCCATGTAAGAGGCCAAGTAATAAAGATTTGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTAGGAAGTGGATGTaGCAGTGTGTCGAGATCATG +
Preference number: 3 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSPRKWM*QCVEIM
Trigger: CATGATCTCGACACACTGCAACATCCACTTCCTAGG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCACAGGAAAGATTATTaGAAGGTCAAAGCAGGTGAG +
Preference number: 3 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVHRKDY*KVKAGE
Trigger: CTCACCTGCTTTGACCTTCAAATAATCTTTCCTGTG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTTCCACTATGACTGCTaGTTTCCTGAGGCCTCACAG +
Preference number: 3 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNFHYDC*FPEASQ
Trigger: CTGTGAGGCCTCAGGAAACAAGCAGTCATAGTGGAA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCATGTAAGATGTGCCTaGCTTCCCCTTTGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNHVRCA*LPLCLP
Trigger: TGGAAGGCAAAGGGGAAGCAAGGCACATCTTACATG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGACCAATCTCCAGACTTaGTCTTCAGACATACAGAAC +
Preference number: 3 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVTNLQT*SSDIQN
Trigger: GTTCTGTATGTCTGAAGACAAAGTCTGGAGATTGGT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp CACTGCCATTTTCTACAGGTTCTCAAGTGCATGGGCTaGCAAGAGGGTTGGGTGTTTACATTTATTTTTAAT +
Preference number: 3 (lower is better)
Translates to: HCHFLQVLKCMG*QEGWVFTFIFN
Trigger: ATTAAAAATAAATGTAAACACCCAACCCTCTTGGCAGCCCATGCACTTGAGAACCTGTAGAAAATGGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGGCAGAAAGAATTCTTaGAGTAAGCCTGGAAGGTGG +
Preference number: 3 (lower is better)
Translates to: KRKKSLLSETVSGGINRLGRKNS*SKPGRW
Trigger: CCACCTTCCAGGCTTACTCAAAGAATTCTTTCTGCC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCAAGTTTCACTCTTTGTaGCCCAGGTGGGAGTGCAAT +
Preference number: 3 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSKFHSL*PRWECN
Trigger: ATTGCACTCCCACCTGGGCAACAAAGAGTGAAACTT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGGCCCTCTACCGCATTaGGAAAATAAGCCTGTAACA +
Preference number: 3 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNGPLPH*ENKPVT
Trigger: TGTTACAGGCTTATTTTCCAAATGCGGTAGAGGGCC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCACAATAGCAAAAAGTaGGTGGTGGTGCATGTGGGT +
Preference number: 3 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSHNSKK*VVVHVG
Trigger: ACCCACATGCACCACCACCAACTTTTTGCTATTGTG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTTGCTTCCTACAGACTaGAACCATGCCCTAAGGATT +
Preference number: 3 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLLPTD*NHALRI
Trigger: AATCCTTAGGGCATGGTTCAAGTCTGTAGGAAGCAA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAGGATACCCATGACCTaGAGTATTTCTCATTTCTAT +
Preference number: 3 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVRIPMT*SISHFY
Trigger: ATAGAAATGAGAAATACTCAAGGTCATGGGTATCCT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAAAATTCAGAGCCATTaGCAAAGCCTAGTTCCTAGG +
Preference number: 3 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNKIQSH*QSLVPR
Trigger: CCTAGGAACTAGGCTTTGCAAATGGCTCTGAATTTT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCACCAATCTCCAGACTTaGTCTTCAGACATACAGAAC +
Preference number: 3 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSTNLQT*SSDIQN
Trigger: GTTCTGTATGTCTGAAGACAAAGTCTGGAGATTGGT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR GCA 72 bp ACACCCAATACAGTGTTAACAATGGTCACCCTATTCTaGTATCAAGCATTAGAACTCACTCCTTCTATCTAT +
Preference number: 3 (lower is better)
Translates to: TPNTVLTMVTLF*YQALELTPSIY
Trigger: ATAGATAGAAGGAGTGAGTTCTAATGCTTGATAGCAGAATAGGGTGACCATTGTTAACACTGTATTGGGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAATGAAACTACCAGCTaGTATTTATACCTACCCAGG +
Preference number: 3 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNNETTS*YLYLPR
Trigger: CCTGGGTAGGTATAAATACAAGCTGGTAGTTTCATT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAATGAAACTACCAGCTaGTATTTATACCTACCCAGG +
Preference number: 3 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMNETTS*YLYLPR
Trigger: CCTGGGTAGGTATAAATACAAGCTGGTAGTTTCATT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCCCCAAAGATATGTTaGCCTAAAATCTCAGAATGT +
Preference number: 3 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSPPKIC*PKISEC
Trigger: ACATTCTGAGATTTTAGGCAAACATATCTTTGGGGG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGTAAATGAGGTACACTaGAGGTATTTTGCAAGTATC +
Preference number: 3 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSVNEVH*RYFASI
Trigger: GATACTTGCAAAATACCTCAAGTGTACCTCATTTAC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR TCA 72 bp GTTGAGAACATTTCAAATCCTTTATTCCGTCTATTTTaGAACACCCAATACAGTGTTAACAATGGTCACCCT +
Preference number: 3 (lower is better)
Translates to: VENISNPLFRLF*NTQYSVNNGHP
Trigger: AGGGTGACCATTGTTAACACTGTATTGGGTGTTTCAAAATAGACGGAATAAAGGATTTGAAATGTTCTCAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGCCCGCGGGTTCCTCTaGCACGGCGTGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGARGFL*HGVVGQ
Trigger: CTGGCCAACCACGCCGTGGCAGAGGAACCCGCGGGC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCCACCGCTGGAGGAATaGAGAGGCGGGCGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWPPLEE*RGGRGR
Trigger: GCGCCCCCGCCCGCCTCTGCATTCCTCCAGCGGTGG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGCTGCCACGGCGTGGTTaGCCAGACTCTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGLPRRG*PDSARP
Trigger: GGGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAG...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCCTCAGACGTCGGAGTaGCCGCCTCCCCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSPQTSE*PPPQRL
Trigger: GAGCCTCTGGGGAGGCGGTCACTCCGACGTCTGAGG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGGCCCGGAAGTCCAGGTaGACCACCAGGAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSARKSR*TTRRSA
Trigger: GGCCGACCTCCTGGTGGTGCACCTGGACTTCCGGGC...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGTTGTCCGGCCAACATaGCCCCTTCCCGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGVVRPT*PLPACP
Trigger: AGGGCAGGCGGGAAGGGGCCATGTTGGCCGGACAAC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGCCCGGAAGTCCAGGTaGACCACCAGGAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWARKSR*TTRRSA
Trigger: GGCCGACCTCCTGGTGGTGCACCTGGACTTCCGGGC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCCTCGGCGGCAGTGGTaGTTGCCAGCCTGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWPRRQW*LPAWLA
Trigger: CGCAAGCCAGGCTGGCAACCACCACTGCCGCCGAGG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGAGCCTCCCGAGTAGCTaGGGCTACAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSLPSS*GYRHPP
Trigger: TGGCGGGTGCCTGTAGCCCCAGCTACTCGGGAGGCT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGCCCCATCTGTGGATGTaGGGCCAAAGTCCATCGGCC +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGPHLWM*GQSPSA
Trigger: GGCCGATGGACTTTGGCCTCACATCCACAGATGGGG...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAGGCAGGGATTGGAGTaGTGCTGTCGCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQRQGLE*CCRRPG
Trigger: CCCTGGCCTGCGACAGCATCACTCCAATCCCTGCCT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTTCCAGAGCAGGGGGTaGCCGCCGGACAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSFQSRG*PPDRDV
Trigger: GACATCTCTGTCCGGCGGGCACCCCCTGCTCTGGAA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGCTGGGAGGCGGAGGTTaGCGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGLGGGG*REPRLH
Trigger: GTGCAATCTTGGCTCACGGCAACCTCCGCCTCCCAG...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCGGCCCCGCGACACGTaGAGGAACTGCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSRPRDT*RNCLSS
Trigger: GGAGCTGAGGCAGTTCCTGCACGTGTCGCGGGGCCG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTCCTCTGCCACGGCGTaGTTGGCCAGACTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSSATA*LARLCQ
Trigger: CTGGCAGAGTCTGGCCAACCACGCCGTGGCAGAGGA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTCCGGGGCACTGTTCTaGAGGTGCTGTGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSGALF*RCCACW
Trigger: CCAGCAGGCACAGCACCTCCAGAACAGTGCCCCGGA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTCCCCTCGGCGGCAGTaGTGGTTGCCAGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWSPRRQ*WLPAWL
Trigger: AAGCCAGGCTGGCAACCACCACTGCCGCCGAGGGGA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTCCGTACACCACCGCTaGAGGAATGCAGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSVHHR*RNAEAG
Trigger: GCCCGCCTCTGCATTCCTCCAGCGGTGGTGTACGGA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCAGCCTGTGGCCTCGTaGCATCCAAGGCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSQPVAS*HPRLCH
Trigger: GTGACAGAGCCTTGGATGTCACGAGGCCACAGGCTG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTCACCTCCAATGAGGTaGCCGCGGGTTCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSPPMR*PRVPLP
Trigger: TGGCAGAGGAACCCGCGGGCACCTCATTGGAGGTGA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCCAGCCGAAGTAGGGTaGAAAGGAGAGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQPAEVG*KGEGTQ
Trigger: CTGGGTGCCCTCTCCTTTGCACCCTACTTCGGCTGG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGGCACTGTTCTGGAGGTaGTGTGCCTGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSALFWR*CACWSC
Trigger: GCAGGACCAGCAGGCACAGCACCTCCAGAACAGTGC...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGACGGGCATGGGCCACTaGACCTGGCCTCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWTGMGH*TWPLEG
Trigger: GCCTTCTAGAGGCCAGGTGCAGTGGCCCATGCCCGT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGTCGCCCAGGCTGGAGTaGAATAGCACGATCGCACGA +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGSPRLE*NSTIAR
Trigger: TCGTGCGATCGTGCTATTGCACTCCAGCCTGGGCGA...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTCCGCGAGATTAGGCTaGTCCCATTTCCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSARLG*SHFPRG
Trigger: GCCCCTGGGGAAATGGGACCAGCCTAATCTCGCGGA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGACCTTGGCCAGGCCGTaGGTGGGTTGCTTGACTAGG +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQTLARP*VGCLTR
Trigger: CCTAGTCAAGCAACCCACCCACGGCCTGGCCAAGGT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGTTGTCCGGCCAACATaGCCCCTTCCCGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSVVRPT*PLPACP
Trigger: AGGGCAGGCGGGAAGGGGCCATGTTGGCCGGACAAC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTGGCCAGGCTGGTCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWWPGWS*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGACCAGCCTGGCCA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGCCAGGCTCTCACTGTaGCTGTGGCTCTGTATGGGA +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGARLSL*LWLCMG
Trigger: TCCCATACAGAGCCACAGCCACAGTGAGAGCCTGGC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp AGGTCCCGGGACACAGGGAGGGGCAGAAAGAATTCTTaGAGTAAGCCTGGAAGGTGGAGGGGCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: RSRDTGRGRKNS*SKPGRWRGSPG
Trigger: GCCTGGTGAGCCCCTCCACCTTCCAGGCTTACTCAAAGAATTCTTTCTGCCCCTCCCTGTGTCCCGGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGAGCACCCGCTGCACGTaGAATTCTGCCAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSTRCT*NSAKAP
Trigger: TGGAGCCTTGGCAGAATTTCACGTGCAGCGGGTGCT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAGCTACTCCAGAGGCTaGGGGGAAGACTTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGSYSRG*GEDLLK
Trigger: CTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGCT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCAGGTCTGTGCTCTGTaGCCCCATCACGCAACGGAA +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQQVCAL*PHHATE
Trigger: TTCCGTTGCGTGATGGGGTCACAGAGCACAGACCTG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGCTAGGCCAGGGCGGTaGGGCCGACCTTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVARPGR*GRPWPG
Trigger: GCCTGGCCAAGGTCGGCCTCACCGCCCTGGCCTAGC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGGACAGAGACGGGGCTaGGCTGGCCGGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGGQRRG*AGRAVG
Trigger: GCCCACAGCCCGGCCAGCTCAGCCCCGTCTCTGTCC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGGCTGGGGTGAGCCCATaGAGTCCAGAGAGCAAACGA +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSAGVSP*SPESKR
Trigger: TCGTTTGCTCTCTGGACTTCATGGGCTCACCCCAGC...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGACCCTCAGTCACGGATaGGGAGCTGGTAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWTLSHG*GAGRGE
Trigger: CTCGCCTCTACCAGCTCCGCATCCGTGACTGAGGGT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCCACCGCTGGAGGAATaGAGAGGCGGGCGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPPPLEE*RGGRGR
Trigger: GCGCCCCCGCCCGCCTCTGCATTCCTCCAGCGGTGG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTTTGCCCAGGCTGGAGTaGAGTGGCTCGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSLPRLE*SGSISA
Trigger: GGCCGAGATCGAGCCACTGCACTCCAGCCTGGGCAA...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGACCAGGAGTACTTGGTaGCATAGGCCGGGGACTAGA +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGTRSTW*HRPGTR
Trigger: TCTAGTCCCCGGCCTATGGCACCAAGTACTCCTGGT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAGCCTGCTTGGCCTCTaGGTAGAGAAAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWSLLGL*VEKGQP
Trigger: GGGCTGGCCTTTCTCTACCCAGAGGCCAAGCAGGCT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGATTAGCCAGGCGAGGTaGTGGGCACCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQISQAR*WAPVVP
Trigger: TGGGACTACAGGTGCCCACCACCTCGCCTGGCTAAT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGGTAATCCCAGCACTGTaGGAGGCGGATCACGAGGTC +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQVIPAL*EADHEV
Trigger: GACCTCGTGATCCGCCTCCCACAGTGCTGGGATTAC...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCTCCTGCTCTTTCTCTaGAGGGAGCTGGGCGACGAT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQLLLFL*RELGDD
Trigger: ATCGTCGCCCAGCTCCCTCCAGAGAAAGAGCAGGAG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGGAGACCGAGGCAAGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGGDRGK*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACTTGCCTCGGTCTCC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCAGCTCAGCAGCCTCTaGGGCTGGCCTACTTTTCAA +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQQLSSL*GWPTFQ
Trigger: TTGAAAAGTAGGCCAGCCTCAGAGGCTGCTGAGCTG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGCCCGCGGGTTCCTCTaGCACGGCGTGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVARGFL*HGVVGQ
Trigger: CTGGCCAACCACGCCGTGGCAGAGGAACCCGCGGGC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGCACTGTTCTGGAGGTaGTGTGCCTGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSALFWR*CACWSC
Trigger: GCAGGACCAGCAGGCACAGCACCTCCAGAACAGTGC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAGGCCGTGGGTGGGTTaGTTGACTAGGCCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWRPWVG*LTRPES
Trigger: ACTCTCTGGCCTAGTCAAGCAACCCACCCACGGCCT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGGCCGTGAGCCAAGATTaGACCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQAVSQD*TIALQP
Trigger: AGGCTGGAGTGCAATGGTGCAATCTTGGCTCACGGC...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAATGAGGGTGCCACATaGTCCTTCTCCTCGCTACTC +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGNEGAT*SFSSLL
Trigger: GAGTAGCGAGGAGAAGGAGCATGTGGCACCCTCATT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTGTGGGGCAAACCCATaGCCAGCATTCCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWCGANP*PAFHLR
Trigger: CCTCAGGTGGAATGCTGGGCATGGGTTTGCCCCACA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGACCAGGAGTACTTGGTaGCATAGGCCGGGGACTAGA +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSTRSTW*HRPGTR
Trigger: TCTAGTCCCCGGCCTATGGCACCAAGTACTCCTGGT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGACAGCTCCAGGACTTTaGGGGGTAGCTTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGTAPGL*GVAFQG
Trigger: TCCCTGAAAAGCTACCCCCCAAAGTCCTGGAGCTGT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAGGTGCTGTGCCTGCTaGTCCTGCTTTGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGRCCAC*SCFVST
Trigger: TGTGGAAACAAAGCAGGACCAGCAGGCACAGCACCT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGAGGTTCTCAAGTGCATaGGCTGCCAAGAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSRFSSA*AAKRVG
Trigger: CCCAACCCTCTTGGCAGCCCATGCACTTGAGAACCT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCCAGCCCTTGGTGAGTaGGCCTTGGACTGTACTTCA +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQPALGE*ALDCTS
Trigger: TGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAAAAGGGGCAGTCAGTaGGGTCAGAGACAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGKRGSQ*GQRQGK
Trigger: CTTGCCTTGTCTCTGACCCCACTGACTGCCCCTTTT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGTCCACCCTTCAGCCCTaGTGCGGGTCTTATTGCTCA +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQSTLQP*CGSYCS
Trigger: TGAGCAATAAGACCCGCACCAGGGCTGAAGGGTGGA...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCAGAGGGACTGGGAATaGGTAGGATGTCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSQRDWE*VGCLWW
Trigger: CCACCAGAGACATCCTACCCATTCCCAGTCCCTCTG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCTGGTCTCAAACTCCTaGCCTCATGATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQLVSNS*PHDPPA
Trigger: GGCAGGTGGATCATGAGGCCAGGAGTTTGAGACCAG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCACTGTCGCCCAGGCTaGAGTGCAATAGCACGATCG +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWHCRPG*SAIARS
Trigger: CGATCGTGCTATTGCACTCCAGCCTGGGCGACAGTG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCGGGATATCCCGAGTTaGCCTGGGCGAAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSRDIPS*PGRRGR
Trigger: TCTCCCTCTTCGCCCAGGCCAACTCGGGATATCCCG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399744.8
3UTR CAA 72 bp GAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTaGAGACCAGTCTGGCCAACACAGCGAAACCCTGCC +
Preference number: 4 (lower is better)
Translates to: EAEEGRSPKIRS*RPVWPTQRNPA
Trigger: GGCAGGGTTTCGCTGTGTTGGCCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGACAGGCAGAACCTGGTaGAACAGCCAAGGGACAAGT +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSTGRTW*NSQGTS
Trigger: ACTTGTCCCTTGGCTGTTTCACCAGGTTCTGCCTGT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAGCCCTTCTTCATCCTaGCAGCACAGCAGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQSPSSS*QHSSAL
Trigger: TAGAGCACTGCTGTGCTGTCAGGATGAAGAAGGGCT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGAGCCCTTCTTCATCCTaGCAGCACAGCAGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSPSSS*QHSSAL
Trigger: TAGAGCACTGCTGTGCTGTCAGGATGAAGAAGGGCT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGCATTGCTGGTACATCTaGGAAGAACACCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGHCWYI*EEHLLL
Trigger: GAGCAGGAGGTGTTCTTCTCAGATGTACCAGCAATG...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAAGCAGCCCATTCTTTaGGACCCAGCTAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGKQPIL*DPAKST
Trigger: AGTGGACTTAGCTGGGTCTCAAAGAATGGGCTGCTT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGACAGAAAAGTATCCTaGAGGACACCTACTGGAGCG +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGDRKVS*RTPTGA
Trigger: CGCTCCAGTAGGTGTCCTTCAGGATACTTTTCTGTC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCAGGAGAGGACTTCTTaGCACCGATCCATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSQERTS*HRSISA
Trigger: GGCAGAAATGGATCGGTGGCAAGAAGTCCTCTCCTG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGTTCTGGAGGTGCTGTaGCTGCTGGTCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWVLEVL*LLVLLC
Trigger: ACAAAGCAGGACCAGCAGGCACAGCACCTCCAGAAC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGATGCTAAGGCCTCGGTaGCACCTCCCTAAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGMLRPR*HLPKVL
Trigger: TAAAACCTTAGGGAGGTGGCACCGAGGCCTTAGCAT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCTCAAGTGCATGGGCTaGCAAGAGGGTTGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQLKCMG*QEGWVF
Trigger: AAACACCCAACCCTCTTGGCAGCCCATGCACTTGAG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTAACCCAAGAGGAGGGTaGAGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSNPRGG*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCACCCTCCTCTTGGGTT...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGAGGCCTCACAGCCATaGAGAACTGTGAGTCAGTTA +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGEASQP*RTVSQL
Trigger: TAACTGACTCACAGTTCTGCATGGCTGTGAGGCCTC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGTTCCAGAGATTCTCCTaGCTCAGCCTCCTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQFQRFS*LSLLLS
Trigger: ACTCAGGAGGAGGCTGAGGCAGGAGAATCTCTGGAA...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTTCGCCCAGACTGGAGTaGAGTGGCAGGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSSPRLE*SGRISA
Trigger: AGCTGAGATCCTGCCACTGCACTCCAGTCTGGGCGA...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTACAGGTGTGAGCCACTaGGCCCGGCTACATGCCTAT +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSTGVSH*ARLHAY
Trigger: ATAGGCATGTAGCCGGGCGCAGTGGCTCACACCTGT...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGCCCACATACACACCCTaGCCAGCCTCTAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGPTYTP*PASSNC
Trigger: ACAATTACTAGAGGCTGGGCAGGGTGTGTATGTGGG...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGAGTGACAGGAACTTGTaGGAGACAGAGCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSDRNL*ETEPSR
Trigger: CCTGGAAGGCTCTGTCTCCCACAAGTTCCTGTCACT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGCAAGCTCCGCCTCCTaGGTTCACGCCATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSASSAS*VHAILL
Trigger: CAGAAGAATGGCGTGAACCCAGGAGGCGGAGCTTGC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAAGCCAAAGAAGGGATaGCCCTCTACCGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGKPKKG*PSTAFG
Trigger: TCCAAATGCGGTAGAGGGCCATCCCTTCTTTGGCTT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGCCAGGCTCTCACTGTaGCTGTGGCTCTGTATGGGA +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSARLSL*LWLCMG
Trigger: TCCCATACAGAGCCACAGCCACAGTGAGAGCCTGGC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGATGCTTCAGAGAGTCTaGCTCCAGAGCAGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGMLQRV*LQSRAQ
Trigger: TTGAGCTCTGCTCTGGAGCCAGACTCTCTGAAGCAT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp AAAGAAACTGAACGTCCAGAGTGTGAACTGGCCTGCTaGTATCTCCCCTCGGCGGCAGTGGTGGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KETERPECELAC*YLPSAAVVVAS
Trigger: GCTGGCAACCACCACTGCCGCCGAGGGGAGATACAAGCAGGCCAGTTCACACTCTGGACGTTCAGTTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp GTGAGGCCGACCTTGGCCAGGCCGTGGGTGGGTTGCTaGACTAGGCCAGAGAGTAAATCAGTAGAATTCCCA +
Preference number: 4 (lower is better)
Translates to: VRPTLARPWVGC*TRPESKSVEFP
Trigger: TGGGAATTCTACTGATTTACTCTCTGGCCTAGTCAAGCAACCCACCCACGGCCTGGCCAAGGTCGGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp TTGGACTGTACTTCACAATCCCATCTTCACCTGCAGTaGTCCGGCCAACATGGCCCCTTCCCGCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LDCTSQSHLHLQ*SGQHGPFPPAL
Trigger: AAGGGCAGGCGGGAAGGGGCCATGTTGGCCGGACAACTGCAGGTGAAGATGGGATTGTGAAGTACAGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGAGCTTGCAGTGAGCTaGGATCACGCCACTGCATTC +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSELAVS*DHATAF
Trigger: GAATGCAGTGGCGTGATCTCAGCTCACTGCAAGCTC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAAGCAGCCCATTCTTTaGGACCCAGCTAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQKQPIL*DPAKST
Trigger: AGTGGACTTAGCTGGGTCTCAAAGAATGGGCTGCTT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGGCCTTTTCTGTGGTCTaGTGTTCACAAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQAFSVV*CSQDAG
Trigger: CCCAGCATCTTGTGAACATCAGACCACAGAAAAGGC...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGATGGGAGGATCACTTaGGGCAAGTTCAACACCAGC +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWDGRIT*GKFNTS
Trigger: GCTGGTGTTGAACTTGCCTCAAGTGATCCTCCCATC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGGACAGAGACGGGGCTaGGCTGGCCGGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVGQRRG*AGRAVG
Trigger: GCCCACAGCCCGGCCAGCTCAGCCCCGTCTCTGTCC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGGGCGCGGACATCTTTaGGCTCGCCCAGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQGRGHL*ARPAPQ
Trigger: CTGCGGGGCTGGGCGAGCGCAAAGATGTCCGCGCCC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCTGACAGCACAGCAGTaGTCTACGCTTCCTTGCACA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWLTAQQ*STLPCT
Trigger: TGTGCAAGGAAGCGTAGAGCACTGCTGTGCTGTCAG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCTGAGATCACGCCACTaGATTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSLRSRH*IPAWVT
Trigger: TGTCACCCAGGCTGGAATGCAGTGGCGTGATCTCAG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCTGCCATGTAAGATGTaGCTTGCTTCCCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQLPCKM*LASPLP
Trigger: AGGCAAAGGGGAAGCAAGGCACATCTTACATGGCAG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCCCATGTGTCTCAGATaGTGCAGGGGATTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQPMCLR*CRGLRE
Trigger: TTCCCTTAATCCCCTGCAGCATCTGAGACACATGGG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAGGTGCTGTGCCTGCTaGTCCTGCTTTGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWRCCAC*SCFVST
Trigger: TGTGGAAACAAAGCAGGACCAGCAGGCACAGCACCT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGCGCATGGCAAGACCATaGGAACAGCCTATTGATACA +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGRMARP*EQPIDT
Trigger: TGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCG...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTAGCCTCCCGAGTAGCTaGGGCTACAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGSLPSS*GYRHPP
Trigger: TGGCGGGTGCCTGTAGCCCCAGCTACTCGGGAGGCT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAGCTCGCAGCCATGCTaGTTGCACACTGCCATTTTC +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWSSQPC*LHTAIF
Trigger: GAAAATGGCAGTGTGCAACCAGCATGGCTGCGAGCT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTTGGTGAGTGGGCCTTaGACTGTACTTCACAATCCC +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSLVSGP*TVLHNP
Trigger: GGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCCAACCCCACATATTTaGATCCAGCCCTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSPTPHI*IQPLVS
Trigger: ACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCAGAGGCAGAGGCTTTaGCTGACTTCTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSQRQRL*LTSGLQ
Trigger: CTGAAGGCCAGAAGTCAGCCAAAGCCTCTGCCTCTG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTACTACCAGGAGTACTTaGTGCCATAGGCCGGGGACT +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSTTRST*CHRPGT
Trigger: AGTCCCCGGCCTATGGCACCAAGTACTCCTGGTAGT...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAGCCTCCTGAGTATCTaGGATTACAGGCACACGCCA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWSLLSI*DYRHTP
Trigger: TGGCGTGTGCCTGTAATCCCAGATACTCAGGAGGCT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCAGCCAAAGGACAGTTaGAGGAATCGAGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQQPKDS*RNRASC
Trigger: GCATGAAGCTCGATTCCTCCAACTGTCCTTTGGCTG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCTCTCACTGTGGCTGTaGCTCTGTATGGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWLSLWL*LCMGQR
Trigger: TCTCTGTCCCATACAGAGCCACAGCCACAGTGAGAG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTAGGCTCTGTCACAGATaGGTAACCACCTTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSRLCHR*VTTFLR
Trigger: GCGGAGGAAGGTGGTTACCCATCTGTGACAGAGCCT...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCCTCAGACGTCGGAGTaGCCGCCTCCCCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQPQTSE*PPPQRL
Trigger: GAGCCTCTGGGGAGGCGGTCACTCCGACGTCTGAGG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGTATTCTGGAAGGTTTTaGTTGGCTGGGTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQYSGRF*LAGSWS
Trigger: GCTCCAAGACCCAGCCAATCAAAACCTTCCAGAATA...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACCTGTGGCCACGGACGTaGGGAGCAGAGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENLWPRT*GAERLW
Trigger: CCACAGCCTCTCTGCTCCTCACGTCCGTGGCCACAG...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGATTAACATCCTGACCTaGAGAACCAACCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSINILT*RTNPLP
Trigger: AGGCAAGGGGTTGGTTCTTCAGGTCAGGATGTTAAT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTCACCATGGAGACCATaGAATCCAGGAACAGGACAG +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWSPWRP*NPGTGQ
Trigger: CTGTCCTGTTCCTGGATTTCATGGTCTCCATGGTGA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTAGGCAGGGATTGGAGTaGTGCTGTCGCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPRQGLE*CCRRPG
Trigger: CCCTGGCCTGCGACAGCATCACTCCAATCCCTGCCT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCCAAGATCAGGAGTTTaGGACCAGTCTGGCCAACAC +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSPRSGV*DQSGQH
Trigger: GTGTTGGCCAGACTGGTCTCAAACTCCTGATCTTGG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGCCTCAATGGGGTTTTTaGCTGGGACTATTATCTAGG +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGPQWGF*LGLLSR
Trigger: CCTAGATAATAGTCCCAGTCAAAAACCCCATTGAGG...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCTCTGGATCGGGTTTTaGCACAAGTCATTGCACAGC +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWLWIGF*HKSLHS
Trigger: GCTGTGCAATGACTTGTGTCAAAACCCGATCCAGAG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCAGGAGAGGACTTCTTaGCACCGATCCATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSQERTS*HRSISA
Trigger: GGCAGAAATGGATCGGTGGCAAGAAGTCCTCTCCTG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCTGCACGTGAAATTCTaGCAAGGCTCCATATTCTGG +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQLHVKF*QGSIFW
Trigger: CCAGAATATGGAGCCTTGGCAGAATTTCACGTGCAG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGTGTGCCTGCTGGTCCTaGTTTGTTTCCACATCATCT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQCACWS*FVSTSS
Trigger: AGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAGGCGTGAGTCACCATaGCCAGCAAAGAAGTATGTT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQRRESP*PAKKYV
Trigger: AACATACTTCTTTGCTGGGCATGGTGACTCACGCCT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGGCGGCAGTGGTGGTTaGCAGCCTGGCTTGCGTTTG +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPGGSGG*QPGLRL
Trigger: CAAACGCAAGCCAGGCTGGCAACCACCACTGCCGCC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCGCAGCCATGCTGGTTaGACACTGCCATTTTCTACA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWRSHAG*TLPFST
Trigger: TGTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTGGCCCCTTCCCGCCTaGCCTTTCCTAACCACCTCC +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPWPLPA*PFLTTS
Trigger: GGAGGTGGTTAGGAAAGGGCAGGCGGGAAGGGGCCA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTTCCAGAGCAGGGGGTaGCCGCCGGACAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPFQSRG*PPDRDV
Trigger: GACATCTCTGTCCGGCGGGCACCCCCTGCTCTGGAA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTTGGGAGGTGAGGCATaGAGATCACTTGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWLGGEA*RSLEVK
Trigger: CTTGACCTCAAGTGATCTGCATGCCTCACCTCCCAA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCCGAGATCACACCCCTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGPRSHP*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGGGGTGTGATCTCGG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCACCTGAGGCCCTTCTaGCAGCATACATTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSHLRPF*QHTFSV
Trigger: CACACTGAATGTATGCTGGCAGAAGGGCCTCAGGTG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGGAGGAAGGGGAAGCTaGATCAAATCTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSGGRGS*IKSHHQ
Trigger: CTGGTGGTGAGATTTGATCCAGCTTCCCCTTCCTCC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGGAGGCCTAGGTGGGTaGATCACAAGTTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSGGLGG*ITSSGD
Trigger: ATCTCCTGAACTTGTGATCCACCCACCTAGGCCTCC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGTGGCAAACAATGTCTaGATCCGTACACCACCGCTG +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSVANNV*IRTPPL
Trigger: CAGCGGTGGTGTACGGATCCAGACATTGTTTGCCAC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTATTAGCCGGGCGCGGTaGCAGGAGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGISRAR*QEPVVP
Trigger: TGGGACTACAGGCTCCTGCCACCGCGCCCGGCTAAT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCTGTTAACACGAACCTaGAAAGAGGTCCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQLLTRT*KEVQSS
Trigger: GGATGACTGGACCTCTTTCCAGGTTCGTGTTAACAG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAGTTTGAGACCAGTCTaGCCAACACAGCGAAACCCT +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWSLRPV*PTQRNP
Trigger: AGGGTTTCGCTGTGTTGGCCAGACTGGTCTCAAACT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGTCTTTCCTACCGAGATaGTGTCCCACTCATCTATCT +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGSFLPR*CPTHLS
Trigger: AGATAGATGAGTGGGACACCATCTCGGTAGGAAAGA...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGTTCATTCCTGTTGTATaGGGTACCAGTGAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGFIPVV*GTSECR
Trigger: CCTACACTCACTGGTACCCCATACAACAGGAATGAA...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCTGAAGGACACCTACTaGAGCGGATTGCTGGATTTA +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSLKDTY*SGLLDL
Trigger: TAAATCCAGCAATCCGCTCCAGTAGGTGTCCTTCAG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp GTGCCTTGCTTCCCCTTTGCCTTCCACTATGACTGCTaGTTTCCTGAGGCCTCACAGCCATGCAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: VPCFPFAFHYDC*FPEASQPCRTV
Trigger: CACAGTTCTGCATGGCTGTGAGGCCTCAGGAAACAAGCAGTCATAGTGGAAGGCAAAGGGGAAGCAAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGATGTTTCTCAAGAAGTaGAAGGCCAAGGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSMFLKK*KAKGHF
Trigger: GAAGTGACCCTTGGCCTTTCACTTCTTGAGAAACAT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGGATGCTTGTGGCTGGTaGGAAAACAACACTGAAACA +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQDACGW*ENNTET
Trigger: TGTTTCAGTGTTGTTTTCTCACCAGCCACAAGCATC...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGACCTGCACGAAGCTATaGACTATTTCCTCATCCCTT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQTCTKL*TISSSL
Trigger: AAGGGATGAGGAAATAGTTCATAGCTTCGTGCAGGT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGGCATGCAGATCACTTaGGGTCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSGMQIT*GQEFKT
Trigger: GGTCTTGAACTCTTGACCTCAAGTGATCTGCATGCC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACGGCAGGTGGACCACCTaGGGTTGGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENGRWTT*GWEFET
Trigger: GGTCTCGAACTCCCAACCTCAGGTGGTCCACCTGCC...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGGAAGGGGCCTATCTaGGGCAAAAGCTGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRKGPI*GKSWAR
Trigger: GCGAGCCCAGCTTTTGCCTCAGATAGGCCCCTTCCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTCACCTCCAATGAGGTaGCCGCGGGTTCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPSPPMR*PRVPLP
Trigger: TGGCAGAGGAACCCGCGGGCACCTCATTGGAGGTGA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACCAGCCGAAGTAGGGTaGAAAGGAGAGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVPAEVG*KGEGTQ
Trigger: CTGGGTGCCCTCTCCTTTGCACCCTACTTCGGCTGG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGAAGAACCAACCCCTTaGCTTCACCAAGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWEEPTP*LHQEDG
Trigger: TCCATCTTCTTGGTGAAGGCAAGGGGTTGGTTCTTC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGATGCTGGTTGCACACTaGCATTTTCTACAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQMLVAH*HFLQVL
Trigger: GAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCAT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTAATCCCATCTTCACCTaGAGTTGTCCGGCCAACATG +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSNPIFT*SCPANM
Trigger: CATGTTGGCCGGACAACTGCAGGTGAAGATGGGATT...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGAGGCCTCACAGCCATaGAGAACTGTGAGTCAGTTA +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSEASQP*RTVSQL
Trigger: TAACTGACTCACAGTTCTGCATGGCTGTGAGGCCTC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCATTCTCTCTGCTGCTaGCATGTAAGATGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWHSLCC*HVRCAL
Trigger: CAAGGCACATCTTACATGGCAGCAGCAGAGAGAATG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACTGGGAGGCGGAGGTTaGCGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVLGGGG*REPRLH
Trigger: GTGCAATCTTGGCTCACGGCAACCTCCGCCTCCCAG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTGTCACCCTCAATCATaGCAGGCGTTGTCGAATTCT +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWCHPQS*QALSNS
Trigger: AGAATTCGACAACGCCTGGCATGATTGAGGGTGACA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCCAACATCAGGCAGATaGAAAGAACTCAGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSPTSGR*KELSRN
Trigger: GTTTCTGCTGAGTTCTTTGCATCTGCCTGATGTTGG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCAATATCCAGGATGCTaGTCCAGGATGGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSQYPGC*SRMVGV
Trigger: AACACCCACCATCCTGGAGCAGCATCCTGGATATTG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCCCCAGGGGCGCCTGTaGATGTGTCGCTCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQPQGRL*MCRSVA
Trigger: AGCGACAGAGCGACACATCCACAGGCGCCCCTGGGG...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCTGGCGGGGAAAGAGTaGGCAGAGGCACTGAGCGTA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPLAGKE*AEALSV
Trigger: TACGCTCAGTGCCTCTGCCCACTCTTTCCCCGCCAG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGGGAAGAACCTGAAATaGTGTGTACCAAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWGKNLK*CVPRRQ
Trigger: TTGCCTCCTTGGTACACACCATTTCAGGTTCTTCCC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGCTCATAAGATGCTTGTaGCTGGTGAGAAAACAACAC +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGLIRCL*LVRKQH
Trigger: GTGTTGTTTTCTCACCAGCCACAAGCATCTTATGAG...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGCCTGCTTGGCCTCTaGGTAGAGAAAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVSLLGL*VEKGQP
Trigger: GGGCTGGCCTTTCTCTACCCAGAGGCCAAGCAGGCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGGCACCTTCTCTATTTTaGGCATCAACACCAAGGACA +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQAPSLF*ASTPRT
Trigger: TGTCCTTGGTGTTGATGCCCAAAATAGAGAAGGTGC...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTTATCCAGTGAGCCATaGGAAGCCATTGAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSLSSEP*EAIEAF
Trigger: AAACGCTTCAATGGCTTCCCATGGCTCACTGGATAA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCCTCGGCGGCAGTGGTaGTTGCCAGCCTGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVPRRQW*LPAWLA
Trigger: CGCAAGCCAGGCTGGCAACCACCACTGCCGCCGAGG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGTCCCCTCGGCGGCAGTaGTGGTTGCCAGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQSPRRQ*WLPAWL
Trigger: AAGCCAGGCTGGCAACCACCACTGCCGCCGAGGGGA...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTACGGCACAGGGAGGCTaGGAGGGAGGAAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPTAQGG*EGGRKA
Trigger: TGCTTTCCTTCCTCCCTCCCAGCCTCCCTGTGCCGT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGTAATTATTTCTGAGTaGTGGGATCACGAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGVIISE*WDHESC
Trigger: ACAGGACTCGTGATCCCACCACTCAGAAATAATTAC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTATTAGCCAGGCGTGGTaGCGGGCGCCTATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPISQAW*RAPIVP
Trigger: TGGGACTATAGGCGCCCGCCACCACGCCTGGCTAAT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTATTAGCCAGGCGTGGTaGCGGGCGCCTATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGISQAW*RAPIVP
Trigger: TGGGACTATAGGCGCCCGCCACCACGCCTGGCTAAT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTAGTTTGAGACCAGTCTaGCCAACACAGCGAAACCCT +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSSLRPV*PTQRNP
Trigger: AGGGTTTCGCTGTGTTGGCCAGACTGGTCTCAAACT...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGATAGCAAAAAGTTGGTaGTGGTGCATGTGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSIAKSW*WCMWVL
Trigger: CAACACCCACATGCACCACCACCAACTTTTTGCTAT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTTTCCCCTGGGAGGGGTaGAGCTTTAAACCAACATCA +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSFPWEG*SFKPTS
Trigger: TGATGTTGGTTTAAAGCTCCACCCCTCCCAGGGGAA...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp CCCACATATTTGGATCCAGCCCTTGGTGAGTGGGCCTaGGACTGTACTTCACAATCCCATCTTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: PTYLDPALGEWA*DCTSQSHLHLQ
Trigger: CTGCAGGTGAAGATGGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp CACAGAATCCCAACCCCACATATTTGGATCCAGCCCTaGGTGAGTGGGCCTTGGACTGTACTTCACAATCCC +
Preference number: 4 (lower is better)
Translates to: HRIPTPHIWIQP*VSGPWTVLHNP
Trigger: GGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGGCCTCCTCAGAGCCTaGGTGTTCCTGTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGGLLRA*VFLFLL
Trigger: CAGCAGAAACAGGAACACTCAGGCTCTGAGGAGGCC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACCCCCAGCCTGAACAGTaGGAAGGCTCCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENPQPEQ*EGSCSF
Trigger: GAAGCTGCAGGAGCCTTCTCACTGTTCAGGCTGGGG...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAGAAAGGGAAGAACCTaGAATGGTGTGTACCAAGGA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWRKGRT*NGVYQG
Trigger: TCCTTGGTACACACCATTTCAGGTTCTTCCCTTTCT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGCTAGGCCAGGGCGGTaGGGCCGACCTTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNARPGR*GRPWPG
Trigger: GCCTGGCCAAGGTCGGCCTCACCGCCCTGGCCTAGC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTTCCTGGCTAACACGGTaGAACCCAGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSSWLTR*NPVSTK
Trigger: TTTAGTAGAGACTGGGTTTCACCGTGTTAGCCAGGA...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGGCAGAGGCTTTGGCTaGCTTCTGGCCTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGGRGFG*LLAFRA
Trigger: AGCTCTGAAGGCCAGAAGTCAGCCAAAGCCTCTGCC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGGTGCATGTGGGTGTTaGCCGGGCTGGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQGACGC*PGWAKK
Trigger: CTTCTTGGCCCAGCCCGGTCAACACCCACATGCACC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGCTGGGGTGAGCCCATaGAGTCCAGAGAGCAAACGA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPAGVSP*SPESKR
Trigger: TCGTTTGCTCTCTGGACTTCATGGGCTCACCCCAGC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTAGGCGTGAGTCACCATaGCCAGCAAAGAAGTATGTT +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSRRESP*PAKKYV
Trigger: AACATACTTCTTTGCTGGGCATGGTGACTCACGCCT...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTAGGCACTATCTGTCCTaGTTGCACCCACCTCCACCC +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGRHYLS*LHPPPP
Trigger: GGGTGGAGGTGGGTGCAAGCAGGACAGATAGTGCCT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGACAGTTCCTTGGGCTaGTTTAAGTGGATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSDSSLG*FKWIAE
Trigger: CTCTGCTATCCACTTAAAGCAGCCCAAGGAACTGTC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCATTCTCTCTGCTGCTaGCATGTAAGATGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSHSLCC*HVRCAL
Trigger: CAAGGCACATCTTACATGGCAGCAGCAGAGAGAATG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGTTTGACACAAGTCATTaGACAGCTACTCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQFDTSH*TATLSL
Trigger: AAGGCTCAGAGTAGCTGTGCAATGACTTGTGTCAAA...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAATGACCAAGGAAATTaGACCATCCATCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQNDQGN*TIHQRA
Trigger: AGCTCTCTGATGGATGGTGCAATTTCCTTGGTCATT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGAATGACCAAGGAAATTaGACCATCCATCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSNDQGN*TIHQRA
Trigger: AGCTCTCTGATGGATGGTGCAATTTCCTTGGTCATT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCCAACATCAGGCAGATaGAAAGAACTCAGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWPTSGR*KELSRN
Trigger: GTTTCTGCTGAGTTCTTTGCATCTGCCTGATGTTGG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTTTCCAGGCACCCCATTaGTGGGGTGAGCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGFQAPH*WGEPMK
Trigger: CTTCATGGGCTCACCCCAGCAATGGGGTGCCTGGAA...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGTTTACACGTCAGATTTaGAGGATTCTTGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQFTRQI*RILASL
Trigger: CAGGGATGCAAGAATCCTGCAAATCTGACGTGTAAA...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGTCCGGGGCACTGTTCTaGAGGTGCTGTGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQSGALF*RCCACW
Trigger: CCAGCAGGCACAGCACCTCCAGAACAGTGCCCCGGA...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCCTTCACCAAGAAGATaGAATGTTTCATGGACACAG +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSPSPRR*NVSWTQ
Trigger: CTGTGTCCATGAAACATTCCATCTTCTTGGTGAAGG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTACGGCTTTTCCGTGCTaGGAGGGAGGAAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPTAFPC*EGGKQR
Trigger: CCTCTGCTTTCCTCCCTCCCAGCACGGAAAAGCCGT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGATTATTTCTGAGTGGTaGGATCACGAGTCCTGTATT +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGIISEW*DHESCI
Trigger: AATACAGGACTCGTGATCCCACCACTCAGAAATAAT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGCTGAGGCAGGAGAATaGCGTGAACCCGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQAEAGE*REPGRR
Trigger: CCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGCTGAGGCAGGAGAATaGCGTGAACCCGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQAEAGE*REPGRR
Trigger: CCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGAGTAAACAGCATCGCTaGTCATCTACCTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSKQHR*SSTCFE
Trigger: TTCAAAGCAGGTAGATGACCAGCGATGCTGTTTACT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCCTTTAAGGTTTACATaGCTGCAGCAGCCGCAATCA +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSPLRFT*LQQPQS
Trigger: TGATTGCGGCTGCTGCAGCCATGTAAACCTTAAAGG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGAGCTCAACTGGATCTaGAAGGGCAAACCTTTCATA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWELNWI*KGKPFI
Trigger: TATGAAAGGTTTGCCCTTCCAGATCCAGTTGAGCTC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGATGGGAACAGCCTATTaGTACAGAATTAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSMGTAY*YRIRSA
Trigger: AGCTGATCTAATTCTGTATCAATAGGCTGTTCCCAT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCCCCAGCCTGAACAGTaGGAAGGCTCCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQPQPEQ*EGSCSF
Trigger: GAAGCTGCAGGAGCCTTCTCACTGTTCAGGCTGGGG...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTAGCTACTCCAGAGGCTaGGGGGAAGACTTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGSYSRG*GEDLLK
Trigger: CTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGCT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACCAGGTCTGTGCTCTGTaGCCCCATCACGCAACGGAA +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENQVCAL*PHHATE
Trigger: TTCCGTTGCGTGATGGGGTCACAGAGCACAGACCTG...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAATAGTAATTATTTCTaGGTGGTGGGATCACGAGTC +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQNSNYF*VVGSRV
Trigger: GACTCGTGATCCCACCACTCAGAAATAATTACTATT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGGATCCAGCCCTTGGTaGGTGGGCCTTGGACTGTAC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQGSSPW*VGLGLY
Trigger: GTACAGTCCAAGGCCCACTCACCAAGGGCTGGATCC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGAGCTTGCAGTGAGCTaGGATCACGCCACTGCATTC +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPELAVS*DHATAF
Trigger: GAATGCAGTGGCGTGATCTCAGCTCACTGCAAGCTC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTCATCAGACAGAATTTaGTGCTGTGGTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSSDRI*CCGWIC
Trigger: ACATATCCAACCACAGCATCAAATTCTGTCTGATGA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGGCAGGAGAATCGCTTaGACCTGGGAGGTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVGRRIA*TWEVEV
Trigger: AACTTCCACCTCCCAGGTTCAAGCGATTCTCCTGCC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGGCAGGAGAATCGCTTaGACCTGGGAGGTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGGRRIA*TWEVEV
Trigger: AACTTCCACCTCCCAGGTTCAAGCGATTCTCCTGCC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGAGAACAAGAGGCAGTaGGCACTGGGAGCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQENKRQ*ALGAGV
Trigger: GACTCCCGCTCCCAGTGCTCACTGCCTCTTGTTCTC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGGGCGCGGACATCTTTaGGCTCGCCCAGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNGRGHL*ARPAPQ
Trigger: CTGCGGGGCTGGGCGAGCGCAAAGATGTCCGCGCCC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGTAGAGGCGAGAAAATaGAGCCTTCCGGATCCAGCG +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPVEARK*SLPDPA
Trigger: CGCTGGATCCGGAAGGCTGCATTTTCTCGCCTCTAC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTATGGAGGTGCTGTGCCTaGTGGTCCTGCTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVWRCCA*WSCFVS
Trigger: GGAAACAAAGCAGGACCAGCAGGCACAGCACCTCCA...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGTTCTGGAGGTGCTGTaGCTGCTGGTCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVVLEVL*LLVLLC
Trigger: ACAAAGCAGGACCAGCAGGCACAGCACCTCCAGAAC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTGGCCCCTTCCCGCCTaGCCTTTCCTAACCACCTCC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVWPLPA*PFLTTS
Trigger: GGAGGTGGTTAGGAAAGGGCAGGCGGGAAGGGGCCA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGTTGCTCACCAACTCTTaGTGCTTCTATTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQLLTNS*CFYFFL
Trigger: AAGGAAGAAATAGAAGCAGCAAGAGTTGGTGAGCAA...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTAGGAATCAGAAGTGCTaGCTTTTCTGTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSRNQKC*LFCGLM
Trigger: CATCAGACCACAGAAAAGGCAGCACTTCTGATTCCT...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGGATCTCAGCTCACTaGAACCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRISAH*NLCLPG
Trigger: ACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGTTAAATTCAGTGACATaGATCCTTGGCAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGLNSVT*ILGRED
Trigger: ATCTTCTCTGCCAAGGATGCATGTCACTGAATTTAA...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGGGCATGGTGGTGCATaGCTGTCATACCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGGHGGA*LSYQLL
Trigger: GAGTAGCTGGTATGACAGGCATGCACCACCATGCCC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCGCTGGTCATCTACCTaGTTTGAATTAATACCATTG +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQRWSST*FELIPL
Trigger: CAATGGTATTAATTCAAAGCAGGTAGATGACCAGCG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTTTGACACAAGTCATTaGACAGCTACTCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWFDTSH*TATLSL
Trigger: AAGGCTCAGAGTAGCTGTGCAATGACTTGTGTCAAA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACTCGCCCAGGCTGGAGTaGAATAGCACGATCGCACGA +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENSPRLE*NSTIAR
Trigger: TCGTGCGATCGTGCTATTGCACTCCAGCCTGGGCGA...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTATTTCTGCCAGGGCCTaGATCCCCACAACACACAGG +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPISARA*IPTTHR
Trigger: CCTGTGTGTTGTGGGGATCCAGGCCCTGGCAGAAAT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAACCTCCACCCAGGGCTaGCCAACAATAGCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVTSTQG*PTIACF
Trigger: GAAACAGGCTATTGTTGGCCAGCCCTGGGTGGAGGT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGGGCCAGACATTTTTCTaGTTAACACTCCATGTATTC +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQGQTFF*LTLHVF
Trigger: GAATACATGGAGTGTTAACCAGAAAAATGTCTGGCC...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTAGGTTCTCAAGTGCATaGGCTGCCAAGAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPRFSSA*AAKRVG
Trigger: CCCAACCCTCTTGGCAGCCCATGCACTTGAGAACCT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTAGCCCACAGAGGGACTaGGAATGGGTAGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGSPQRD*EWVGCL
Trigger: GAGACATCCTACCCATTCCCAGTCCCTCTGTGGGCT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGCCCACAGAGGGACTaGGAATGGGTAGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVSPQRD*EWVGCL
Trigger: GAGACATCCTACCCATTCCCAGTCCCTCTGTGGGCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGGCCACCCAAAGTGGTaGGATTACGGGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQGHPKW*DYGHGP
Trigger: TGGCCCATGCCCGTAATCCCACCACTTTGGGTGGCC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCAGGCACCCCATTGCTaGGGTGAGCCCATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQQAPHC*GEPMKS
Trigger: GGACTTCATGGGCTCACCCCAGCAATGGGGTGCCTG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp TCTCTAGTGAAGACGCTGAGCTCGCAGCCATGCTGGTaGCACACTGCCATTTTCTACAGGTTCTCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: SLVKTLSSQPCW*HTAIFYRFSSA
Trigger: TGCACTTGAGAACCTGTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCGAGCTCAGCGTCTTCACTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTaGGATCCAGCCCTTGGTGAGTGGGCCTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTY*DPALGEWALDC
Trigger: ACAGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGGTTTTGTTTCGTTTCTaGGACCAAGTTTCACTCTTT +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSVLFRF*DQVSLF
Trigger: AAAGAGTGAAACTTGGTCTCAGAAACGAAACAAAAC...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCCCCATCTGTGGATGTaGGGCCAAAGTCCATCGGCC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVPHLWM*GQSPSA
Trigger: GGCCGATGGACTTTGGCCTCACATCCACAGATGGGG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCGTGGGTGGGTTGCTTaGCTAGGCCAGAGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGRGWVA*LGQRVN
Trigger: ATTTACTCTCTGGCCTAGTCAAGCAACCCACCCACG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACGTGGGTGGGTTGCTTaGCTAGGCCAGAGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRGWVA*LGQRVN
Trigger: ATTTACTCTCTGGCCTAGTCAAGCAACCCACCCACG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGATCTCCTGACCTCGTaGTCCACCTGCCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVDLLTS*STCLGF
Trigger: GAAGCCGAGGCAGGTGGATCACGAGGTCAGGAGATC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTGGCCTTCAGAGCTGTaGGATAATAAATTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWWPSEL*DNKFLL
Trigger: CAACAGAAATTTATTATCTCACAGCTCTGAAGGCCA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGGCAGAGGCTTTGGCTaGCTTCTGGCCTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQGRGFG*LLAFRA
Trigger: AGCTCTGAAGGCCAGAAGTCAGCCAAAGCCTCTGCC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTAGGTCAAGCGAAGACTaGGGCAGGGATTGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPRSSED*GRDWSD
Trigger: ATCACTCCAATCCCTGCCTCAGTCTTCGCTTGACCT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCCAAGATCAGGAGTTTaGGACCAGTCTGGCCAACAC +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGPRSGV*DQSGQH
Trigger: GTGTTGGCCAGACTGGTCTCAAACTCCTGATCTTGG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACGTAGAGGCGAGAAAATaGAGCCTTCCGGATCCAGCG +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENVEARK*SLPDPA
Trigger: CGCTGGATCCGGAAGGCTGCATTTTCTCGCCTCTAC...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCAGAAACTCATAAGATaGTTGTGGCTGGTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWQKLIR*LWLVRK
Trigger: TTTTCTCACCAGCCACAAGCATCTTATGAGTTTCTG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTTGCTCTACGCTTCCTTaGACAGAAACTCATAAGATG +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSCSTLP*TETHKM
Trigger: CATCTTATGAGTTTCTGTGCAAGGAAGCGTAGAGCA...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGAAAGGCCAGCCCCTaGAGAAAGCCCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRKASP*RKPFFI
Trigger: GATGAAGAAGGGCTTTCTGCAGGGGCTGGCCTTTCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCCTCTTGGATGCATCTaGAACAAGCACTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGPLGCI*NKHSPA
Trigger: AGCTGGGGAGTGCTTGTTGCAGATGCATCCAAGAGG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGATAATAACTAGCACCTaGTCACTACATGCTATGCAC +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWIITST*SLHAMH
Trigger: GTGCATAGCATGTAGTGAGCAGGTGCTAGTTATTAT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACAGGATCTCAGCTCACTaGAACCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENRISAH*NLCLPG
Trigger: ACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCCT...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGTCGCCCAGACTGGAGTaGAGTGGCAGGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQSPRLE*SGRISA
Trigger: AGCTGAGATCCTGCCACTGCACTCCAGTCTGGGCGA...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCCCCAAAGATATGTTTaGCTAAAATCTCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSPQRYV*LKSQNV
Trigger: CACATTCTGAGATTTTAGGCAAACATATCTTTGGGG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAATAAGAAGGAACACTaGATGGTTACTAACATGGAT +
Preference number: 4 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGNKKEH*MVTNMD
Trigger: ATCCATGTTAGTAACCATGCAGTGTTCCTTCTTATT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGTGTGGGGCAAACCCATaGCCAGCATTCCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQCGANP*PAFHLR
Trigger: CCTCAGGTGGAATGCTGGGCATGGGTTTGCCCCACA...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCTGCGCCCGGCTACATaGCTATTTTTAATAAATGTA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWLRPAT*LFLINV
Trigger: TACATTTATTAAAAATAGGCATGTAGCCGGGCGCAG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCTGCCACGGCGTGGTTaGCCAGACTCTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNLPRRG*PDSARP
Trigger: GGGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTAAGGTTTTGATTGGCTaGGTCTTGGAGCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPKVLIG*VLEPGT
Trigger: GGTGCCTGGCTCCAAGACCCAGCCAATCAAAACCTT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGCCTCGCTGTGTGAATaGCCTGAAGTACATCCAGTC +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGASLCE*PEVHPV
Trigger: GACTGGATGTACTTCAGGCCATTCACACAGCGAGGC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGCAGAGTCCCAAAGCTaGCGAACCAACATCGGTAGT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVAESQS*RTNIGS
Trigger: ACTACCGATGTTGGTTCGCCAGCTTTGGGACTCTGC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGTGATGGTGGGCAGCTaGAAGGCCGCACATATAATC +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGVMVGS*KAAHII
Trigger: GATTATATGTGCGGCCTTCCAGCTGCCCACCATCAC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGTCCAGAGTGTGAACTaGCCTGCTTGTATCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVVQSVN*PACISP
Trigger: AGGGGAGATACAAGCAGGCCAGTTCACACTCTGGAC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGGCTGCCAAGAGGGTTaGGTGTTTACATTTATTTTT +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWGCQEG*VFTFIF
Trigger: AAAAATAAATGTAAACACCCAACCCTCTTGGCAGCC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGTTGGAAAATACGAGCTaGGAAACATGTAGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSLENTS*ETCRAK
Trigger: TTTAGCTCTACATGTTTCCCAGCTCGTATTTTCCAA...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGTAATCCCAGCACTGTaGGAGGCGGATCACGAGGTC +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQVIPAL*EADHEV
Trigger: GACCTCGTGATCCGCCTCCCACAGTGCTGGGATTAC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCAAATCTTTATTACTTaGCCTCTTACATGGATGGCC +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWQIFIT*PLTWMA
Trigger: GGCCATCCATGTAAGAGGCCAAGTAATAAAGATTTG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAAAAAGATACAAACTTaGGCATTATGGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWKKIQT*ALWVWD
Trigger: GTCCCAGACCCATAATGCCCAAGTTTGTATCTTTTT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAATGGGGTTTTTGACTaGGACTATTATCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQNGVFD*DYYLGC
Trigger: ACATCCTAGATAATAGTCCCAGTCAAAAACCCCATT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGTAATCCCAACGCTTTaGAAGGCTGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPVIPTL*KAEAGG
Trigger: TCCACCTGCCTCAGCCTTCCAAAGCGTTGGGATTAC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCAGGCACCCCATTGCTaGGGTGAGCCCATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVQAPHC*GEPMKS
Trigger: GGACTTCATGGGCTCACCCCAGCAATGGGGTGCCTG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACGCTGCTCCAGGATGGTaGGTGTTACAGATGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENAAPGW*VLQMEV
Trigger: GACCTCCATCTGTAACACCCACCATCCTGGAGCAGC...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGATGCTGCTCCAGGATaGTGGGTGTTACAGATGGAG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGDAAPG*WVLQME
Trigger: CTCCATCTGTAACACCCACCATCCTGGAGCAGCATC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGAAAGCTGGGCTCGCCTaGAGGCTGGGGAAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQKAGLA*RLGKQF
Trigger: AAACTGCTTCCCCAGCCTCCAGGCGAGCCCAGCTTT...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399744.8
3UTR CAA 72 bp TGTACCAAGGAAAAGCTAGCAAGCACCTTCTCTATTTaGGGCATCAACACCAAGGACACAGTGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CTKEKLASTFSI*GINTKDTVQGS
Trigger: GCTGCCCTGCACTGTGTCCTTGGTGTTGATGCCCAAAATAGAGAAGGTGCTTGCTAGCTTTTCCTTGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp ACCAGCAAATCCACTGTTGATACGCAATTACCCCTCTaGGATGCATCTGCAACAAGCACTCCCCAGCTTCGA +
Preference number: 4 (lower is better)
Translates to: TSKSTVDTQLPL*DASATSTPQLR
Trigger: TCGAAGCTGGGGAGTGCTTGTTGCAGATGCATCCAAGAGGGGTAATTGCGTATCAACAGTGGATTTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp GTATTTATACCTACCCAGGAGGACACCCGCCAGGCTTaGTCATTGCTGGTACATCTGAGAAGAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: VFIPTQEDTRQA*SLLVHLRRTPP
Trigger: AGGAGGTGTTCTTCTCAGATGTACCAGCAATGACAAAGCCTGGCGGGTGTCCTCCTGGGTAGGTATAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCTGTGGCCACGGACGTaGGGAGCAGAGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLWPRT*GAERLW
Trigger: CCACAGCCTCTCTGCTCCTCACGTCCGTGGCCACAG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCAGCTCAGCAGCCTCTaGGGCTGGCCTACTTTTCAA +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQQLSSL*GWPTFQ
Trigger: TTGAAAAGTAGGCCAGCCTCAGAGGCTGCTGAGCTG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCATTGCTGGTACATCTaGGAAGAACACCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPHCWYI*EEHLLL
Trigger: GAGCAGGAGGTGTTCTTCTCAGATGTACCAGCAATG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGCCTTTTCTGTGGTCTaGTGTTCACAAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPAFSVV*CSQDAG
Trigger: CCCAGCATCTTGTGAACATCAGACCACAGAAAAGGC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGGACCCGAGATTAAATaGCTTATGCAAAGTTATAGG +
Preference number: 4 (lower is better)
Translates to: CACWSCFVSTSSTATSRSGPEIK*LMQSYR
Trigger: CCTATAACTTTGCATAAGTCATTTAATCTCGGGTCC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTATCCCCATCTTGGAGGTaGGAAAAATTGGACCCGAGA +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVSPSWR*EKLDPR
Trigger: TCTCGGGTCCAATTTTTCTCACCTCCAAGATGGGGA...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGATTGCACAGCTACTCTaGGCCTTGGAAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQIAQLL*ALEGGH
Trigger: GTGGCCACCTTCCAAGGCTCAGAGTAGCTGTGCAAT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGACAGAAAAGTATCCTaGAGGACACCTACTGGAGCG +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPDRKVS*RTPTGA
Trigger: CGCTCCAGTAGGTGTCCTTCAGGATACTTTTCTGTC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTGGTTGGCCAGACTCTaGCAGGCCCGCTCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNWLARL*QARSQV
Trigger: GACCTGCGAGCGGGCCTGGCAGAGTCTGGCCAACCA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGAGTGTGAACTGGCCTaGTTGTATCTCCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVECELA*LYLPSA
Trigger: CGCCGAGGGGAGATACAAGCAGGCCAGTTCACACTC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGACCCTTCAGCCCTGGTaGGGGTCTTATTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQTLQPW*GSYCSP
Trigger: TGGTGAGCAATAAGACCCGCACCAGGGCTGAAGGGT...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTTGGGAGGTGAGGCATaGAGATCACTTGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPLGGEA*RSLEVK
Trigger: CTTGACCTCAAGTGATCTGCATGCCTCACCTCCCAA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCTGCCATGTAAGATGTaGCTTGCTTCCCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGLPCKM*LASPLP
Trigger: AGGCAAAGGGGAAGCAAGGCACATCTTACATGGCAG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCCTCATTCTCTCTGCTaGTGCCATGTAAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGPHSLC*CHVRCA
Trigger: GGCACATCTTACATGGCAGCAGCAGAGAGAATGAGG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGCCGTGAGCCAAGATTaGACCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQAVSQD*TIALQP
Trigger: AGGCTGGAGTGCAATGGTGCAATCTTGGCTCACGGC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTCCAGGTTTGGCTTCTaGGCCTCCTCAGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSRFGF*ASSEPE
Trigger: CTCAGGCTCTGAGGAGGCCCAGAAGCCAAACCTGGA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACGGAGGAAGGGGAAGCTaGATCAAATCTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENGGRGS*IKSHHQ
Trigger: CTGGTGGTGAGATTTGATCCAGCTTCCCCTTCCTCC...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCCCCAGGGGCGCCTGTaGATGTGTCGCTCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMPQGRL*MCRSVA
Trigger: AGCGACAGAGCGACACATCCACAGGCGCCCCTGGGG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGACCTCCACCCAGGGCTaGCCAACAATAGCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQTSTQG*PTIACF
Trigger: GAAACAGGCTATTGTTGGCCAGCCCTGGGTGGAGGT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTATTGGTGAGTGGGCCTTaGACTGTACTTCACAATCCC +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVLVSGP*TVLHNP
Trigger: GGGATTGTGAAGTACAGTCCAAGGCCCACTCACCAA...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCCAACCCCACATATTTaGATCCAGCCCTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPPTPHI*IQPLVS
Trigger: ACTCACCAAGGGCTGGATCCAAATATGTGGGGTTGG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTTGGAAAATACGAGCTaGGAAACATGTAGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWLENTS*ETCRAK
Trigger: TTTAGCTCTACATGTTTCCCAGCTCGTATTTTCCAA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTACTTGGCCTCTTACATaGATGGCCTCATTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGTWPLT*MASFQV
Trigger: CACCTGGAATGAGGCCATCCATGTAAGAGGCCAAGT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGTCCACCCTTCAGCCCTaGTGCGGGTCTTATTGCTCA +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQSTLQP*CGSYCS
Trigger: TGAGCAATAAGACCCGCACCAGGGCTGAAGGGTGGA...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCAGAGGGACTGGGAATaGGTAGGATGTCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQQRDWE*VGCLWW
Trigger: CCACCAGAGACATCCTACCCATTCCCAGTCCCTCTG...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCTGGTCTCAAACTCCTaGCCTCATGATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQLVSNS*PHDPPA
Trigger: GGCAGGTGGATCATGAGGCCAGGAGTTTGAGACCAG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCAGAGGCAGAGGCTTTaGCTGACTTCTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQQRQRL*LTSGLQ
Trigger: CTGAAGGCCAGAAGTCAGCCAAAGCCTCTGCCTCTG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAATGGGGTTTTTGACTaGGACTATTATCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWNGVFD*DYYLGC
Trigger: ACATCCTAGATAATAGTCCCAGTCAAAAACCCCATT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGGAAGAGGATCATCCTaGATGTCACCAGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQGRGSS*MSPAHW
Trigger: CCAGTGGGCTGGTGACATCCAGGATGATCCTCTTCC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGAGGAGGTGAATCATaGGACAAATTCCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRGGES*DKFPWE
Trigger: CTCCCAGGGGAATTTGTCCCATGATTCACCTCCTCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGCTGCTCCAGGATGGTaGGTGTTACAGATGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQAAPGW*VLQMEV
Trigger: GACCTCCATCTGTAACACCCACCATCCTGGAGCAGC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGAGCAGAGCTCAACTaGATCTGGAAGGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVRAELN*IWKGKP
Trigger: AGGTTTGCCCTTCCAGATCCAGTTGAGCTCTGCTCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTATGCTTCAGAGAGTCTaGCTCCAGAGCAGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPMLQRV*LQSRAQ
Trigger: TTGAGCTCTGCTCTGGAGCCAGACTCTCTGAAGCAT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAATTAACATCCTGACCTaGAGAACCAACCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVINILT*RTNPLP
Trigger: AGGCAAGGGGTTGGTTCTTCAGGTCAGGATGTTAAT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACCTGATCTCGAACTCCTaGCTTCAGGTGATTCACCCA +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENLISNS*LQVIHP
Trigger: TGGGTGAATCACCTGAAGTCAGGAGTTCGAGATCAG...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCACAGCTATGAAGAATaGGGCTGCTCCACATATGCT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGHSYEE*GCSTYA
Trigger: AGCATATGTGGAGCAGCCTCATTCTTCATAGCTGTG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTAATAGTAAAGAGCTCTaGCCACTGCTGCTCACCCTA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPNSKEL*PLLLTL
Trigger: TAGGGTGAGCAGCAGTGGTCAGAGCTCTTTACTATT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTATCACTTTCGCTTTCTaGCAGTTCCTTGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGITFAF*QFLGLL
Trigger: AAGCAGCCCAAGGAACTGTCAGAAAGCGAAAGTGAT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGCCCAGAGAAAGGGTTaGTTTGTGGTTGCCTATGTA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPAQRKG*FVVAYV
Trigger: TACATAGGCAACCACAAATCAACCCTTTCTCTGGGC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGAGGTCAAGCGAAGACTaGGGCAGGGATTGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQRSSED*GRDWSD
Trigger: ATCACTCCAATCCCTGCCTCAGTCTTCGCTTGACCT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTGCCCACATGCAGGATaGGGCCATTGTAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVCPHAG*GHCNAR
Trigger: CCTGGCATTACAATGGCCTCATCCTGCATGTGGGCA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCATCCATCAGAGAGCTaGCTTGCCCACATGCAGGAT +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQHPSES*LAHMQD
Trigger: ATCCTGCATGTGGGCAAGTCAGCTCTCTGATGGATG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCTCAACCACCTAAGATaGGACTTCTGGGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGLNHLR*DFWAMS
Trigger: AGACATTGCCCAGAAGTCTCATCTTAGGTGGTTGAG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGGTGCATGTGGGTGTTaGCCGGGCTGGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSGACGC*PGWAKK
Trigger: CTTCTTGGCCCAGCCCGGTCAACACCCACATGCACC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGGCAGGTGGACCACCTaGGGTTGGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSGRWTT*GWEFET
Trigger: GGTCTCGAACTCCCAACCTCAGGTGGTCCACCTGCC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTATCACCAAAGAGGAGGTaGATCATGGGACAAATTCCC +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVSPKRR*IMGQIP
Trigger: GGGAATTTGTCCCATGATTCACCTCCTCTTTGGTGA...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCTGCACGTGAAATTCTaGCAAGGCTCCATATTCTGG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGLHVKF*QGSIFW
Trigger: CCAGAATATGGAGCCTTGGCAGAATTTCACGTGCAG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTGGAGGTGCTGTGCCTaGTGGTCCTGCTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVWRCCA*WSCFVS
Trigger: GGAAACAAAGCAGGACCAGCAGGCACAGCACCTCCA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACATGCTAAGGCCTCGGTaGCACCTCCCTAAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENMLRPR*HLPKVL
Trigger: TAAAACCTTAGGGAGGTGGCACCGAGGCCTTAGCAT...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAATTACCCCTCTTGGATaGATCTGCAACAAGCACTCC +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVITPLG*ICNKHS
Trigger: GGAGTGCTTGTTGCAGATGCATCCAAGAGGGGTAAT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGTTGCCAGCCTGGCTTaGGTTTGCCCAAAAGTAATA +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGVASLA*VCPKVI
Trigger: TATTACTTTTGGGCAAACGCAAGCCAGGCTGGCAAC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACAATCCCATCTTCACCTaGAGTTGTCCGGCCAACATG +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENNPIFT*SCPANM
Trigger: CATGTTGGCCGGACAACTGCAGGTGAAGATGGGATT...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGACCCTTCAGCCCTGGTaGGGGTCTTATTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVTLQPW*GSYCSP
Trigger: TGGTGAGCAATAAGACCCGCACCAGGGCTGAAGGGT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGCCGAGATCACACCCCTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLPRSHP*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGGGGTGTGATCTCGG...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACACGGGCATGGGCCACTaGACCTGGCCTCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNTGMGH*TWPLEG
Trigger: GCCTTCTAGAGGCCAGGTGCAGTGGCCCATGCCCGT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGTTCCAGAGATTCTCCTaGCTCAGCCTCCTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQFQRFS*LSLLLS
Trigger: ACTCAGGAGGAGGCTGAGGCAGGAGAATCTCTGGAA...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTACAAGGAAGGAATCTTaGCTACAGCCTTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGTRKES*LQPSEA
Trigger: TGCCTCTGAAGGCTGTAGGCAAGATTCCTTCCTTGT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAACAAGGAAGGAATCTTaGCTACAGCCTTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVTRKES*LQPSEA
Trigger: TGCCTCTGAAGGCTGTAGGCAAGATTCCTTCCTTGT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGAATGAGGGTGCCACATaGTCCTTCTCCTCGCTACTC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQNEGAT*SFSSLL
Trigger: GAGTAGCGAGGAGAAGGAGCATGTGGCACCCTCATT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACGCTTTTGAATCAGACTaGTGTGGGGCAAACCCATGC +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENAFESD*CGANPC
Trigger: GCATGGGTTTGCCCCACAGCAGTCTGATTCAAAAGC...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTCCTCTGCCACGGCGTaGTTGGCCAGACTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSSSATA*LARLCQ
Trigger: CTGGCAGAGTCTGGCCAACCACGCCGTGGCAGAGGA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGAAGGTTTTGATTGGCTaGGTCTTGGAGCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQKVLIG*VLEPGT
Trigger: GGTGCCTGGCTCCAAGACCCAGCCAATCAAAACCTT...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGCAGAGTCCCAAAGCTaGCGAACCAACATCGGTAGT +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQAESQS*RTNIGS
Trigger: ACTACCGATGTTGGTTCGCCAGCTTTGGGACTCTGC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGGCAGAGAAAAGAAGTaGCTCACCGCAGAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQGREKK*LTAESQ
Trigger: TTGGGACTCTGCGGTGAGCCACTTCTTTTCTCTGCC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGCTGTAAGGCTCACTTaGTTTTCAGTAGTCAACCCG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGAVRLT*FSVVNP
Trigger: CGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGGGAAGAACCTGAAATaGTGTGTACCAAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPGKNLK*CVPRRQ
Trigger: TTGCCTCCTTGGTACACACCATTTCAGGTTCTTCCC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTGGTGGTTGCCAGCCTaGCTTGCGTTTGCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVWWLPA*LAFAQK
Trigger: CTTTTGGGCAAACGCAAGCCAGGCTGGCAACCACCA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGTGGCAAACAATGTCTaGATCCGTACACCACCGCTG +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQVANNV*IRTPPL
Trigger: CAGCGGTGGTGTACGGATCCAGACATTGTTTGCCAC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGAGCTCGCAGCCATGCTaGTTGCACACTGCCATTTTC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQSSQPC*LHTAIF
Trigger: GAAAATGGCAGTGTGCAACCAGCATGGCTGCGAGCT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCATTAGCCGGGCGCGGTaGCAGGAGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSISRAR*QEPVVP
Trigger: TGGGACTACAGGCTCCTGCCACCGCGCCCGGCTAAT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGGAGACCGAGGCAAGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVGDRGK*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACTTGCCTCGGTCTCC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTGGCCAGGCTGGTCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLWPGWS*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGACCAGCCTGGCCA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGCATGGTTACTAACATaGATTAGGGGATTGAATTTT +
Preference number: 4 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWAWLLT*IRGLNF
Trigger: AAAATTCAATCCCCTAATCCATGTTAGTAACCATGC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGGAAGAGGATCATCCTaGATGTCACCAGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVGRGSS*MSPAHW
Trigger: CCAGTGGGCTGGTGACATCCAGGATGATCCTCTTCC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGACTACCAGGAGTACTTaGTGCCATAGGCCGGGGACT +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVTTRST*CHRPGT
Trigger: AGTCCCCGGCCTATGGCACCAAGTACTCCTGGTAGT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACTGAAGGACACCTACTaGAGCGGATTGCTGGATTTA +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVLKDTY*SGLLDL
Trigger: TAAATCCAGCAATCCGCTCCAGTAGGTGTCCTTCAG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCTCTCACTGTGGCTGTaGCTCTGTATGGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQLSLWL*LCMGQR
Trigger: TCTCTGTCCCATACAGAGCCACAGCCACAGTGAGAG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACTTCCCCTGGGAGGGGTaGAGCTTTAAACCAACATCA +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENFPWEG*SFKPTS
Trigger: TGATGTTGGTTTAAAGCTCCACCCCTCCCAGGGGAA...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACAGAGGAGGTGAATCATaGGACAAATTCCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENRGGES*DKFPWE
Trigger: CTCCCAGGGGAATTTGTCCCATGATTCACCTCCTCT...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGCTCCATTAACATCCTaGCCTGAAGAACCAACCCCT +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQAPLTS*PEEPTP
Trigger: AGGGGTTGGTTCTTCAGGTCAGGATGTTAATGGAGC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTATGTTTCTCAAGAAGTaGAAGGCCAAGGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGMFLKK*KAKGHF
Trigger: GAAGTGACCCTTGGCCTTTCACTTCTTGAGAAACAT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACGACAACCTGGAAAATTaGGCTGAAGACCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENDNLEN*AEDQEA
Trigger: TGCCTCTTGGTCTTCAGCTCAATTTTCCAGGTTGTC...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCAGCAAATCCACTGTTaGTACGCAATTACCCCTCTT +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPQQIHC*YAITPL
Trigger: AAGAGGGGTAATTGCGTATCAACAGTGGATTTGCTG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACATCACTTTCGCTTTCTaGCAGTTCCTTGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENITFAF*QFLGLL
Trigger: AAGCAGCCCAAGGAACTGTCAGAAAGCGAAAGTGAT...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGGATCTCCTGACCTCGTaGTCCACCTGCCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMDLLTS*STCLGF
Trigger: GAAGCCGAGGCAGGTGGATCACGAGGTCAGGAGATC...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAATGCATGCATTTTTCTaGGGGCAAGAACCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVMHAFF*GQEPVG
Trigger: ACCTACAGGTTCTTGCCCTCAGAAAAATGCATGCAT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGTCACCATGGAGACCATaGAATCCAGGAACAGGACAG +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQSPWRP*NPGTGQ
Trigger: CTGTCCTGTTCCTGGATTTCATGGTCTCCATGGTGA...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCTCTGGATCGGGTTTTaGCACAAGTCATTGCACAGC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQLWIGF*HKSLHS
Trigger: GCTGTGCAATGACTTGTGTCAAAACCCGATCCAGAG...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTCTCTCAGGTGCTTTTaGATCAGACTGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSLRCF*IRLLWG
Trigger: GCCCCACAGCAGTCTGATTCAAAAGCACCTGAGAGA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCAGCCTGTGGCCTCGTaGCATCCAAGGCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMQPVAS*HPRLCH
Trigger: GTGACAGAGCCTTGGATGTCACGAGGCCACAGGCTG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGAGAACAAGAGGCAGTaGGCACTGGGAGCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLENKRQ*ALGAGV
Trigger: GACTCCCGCTCCCAGTGCTCACTGCCTCTTGTTCTC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCCACCGATCCATTTCTaGCAGGGCCTGGATCCCCAC +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMPPIHF*QGLDPH
Trigger: GTGGGGATCCAGGCCCTGGCAGAAATGGATCGGTGG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGACCCTCAGTCACGGATaGGGAGCTGGTAGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMTLSHG*GAGRGE
Trigger: CTCGCCTCTACCAGCTCCGCATCCGTGACTGAGGGT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCTGACAGCACAGCAGTaGTCTACGCTTCCTTGCACA +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVLTAQQ*STLPCT
Trigger: TGTGCAAGGAAGCGTAGAGCACTGCTGTGCTGTCAG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGACGGCACAGGGAGGTaGCCTACTCGCGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSDGTGR*PTRGSC
Trigger: ACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGACGGCACAGGGAGGTaGCCTACTCGCGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNDGTGR*PTRGSC
Trigger: ACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTCCTCAGCCATCATCTaGCGTGATGTGTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSSAII*RDVSPS
Trigger: TGAGGGTGACACATCACGGCAGATGATGGCTGAGGA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCCCACATACACACCCTaGCCAGCCTCTAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQPTYTP*PASSNC
Trigger: ACAATTACTAGAGGCTGGGCAGGGTGTGTATGTGGG...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACAAGGCTCCATATTCTaGAAGGTTTTGATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVQGSIF*KVLIGW
Trigger: CCAGCCAATCAAAACCTTCCAGAATATGGAGCCTTG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCAAGGCTCCATATTCTaGAAGGTTTTGATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGQGSIF*KVLIGW
Trigger: CCAGCCAATCAAAACCTTCCAGAATATGGAGCCTTG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGCCTCGCTGTGTGAATaGCCTGAAGTACATCCAGTC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVASLCE*PEVHPV
Trigger: GACTGGATGTACTTCAGGCCATTCACACAGCGAGGC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAGTGACAGGAACTTGTaGGAGACAGAGCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSDRNL*ETEPSR
Trigger: CCTGGAAGGCTCTGTCTCCCACAAGTTCCTGTCACT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGGCAAGGGTTGCCTCTaGGCAAGAAACTGGGGAATA +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVGKGCL*ARNWGI
Trigger: TATTCCCCAGTTTCTTGCCCAGAGGCAACCCTTGCC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACACGGCACAGGGAGGCTaGGAGGGAGGAAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNTAQGG*EGGRKA
Trigger: TGCTTTCCTTCCTCCCTCCCAGCCTCCCTGTGCCGT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGAAGCCAAAGAAGGGATaGCCCTCTACCGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQKPKKG*PSTAFG
Trigger: TCCAAATGCGGTAGAGGGCCATCCCTTCTTTGGCTT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGTTCTCTGGAGGGAGCTaGGCGACGATACTACTAAAC +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQFSGGS*ATILLN
Trigger: GTTTAGTAGTATCGTCGCCCAGCTCCCTCCAGAGAA...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGTACTAAAAGGGGAGTaGGAAGCATTCCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGVLKGE*EAFPEC
Trigger: ACATTCTGGGAATGCTTCCCACTCCCCTTTTAGTAC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGTACTAAAAGGGGAGTaGGAAGCATTCCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPVLKGE*EAFPEC
Trigger: ACATTCTGGGAATGCTTCCCACTCCCCTTTTAGTAC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTATCTTTCCTACCGAGATaGTGTCCCACTCATCTATCT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVSFLPR*CPTHLS
Trigger: AGATAGATGAGTGGGACACCATCTCGGTAGGAAAGA...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTTTCATTCCTGTTGTATaGGGTACCAGTGAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGFIPVV*GTSECR
Trigger: CCTACACTCACTGGTACCCCATACAACAGGAATGAA...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAGCCTCCTGAGTATCTaGGATTACAGGCACACGCCA +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSLLSI*DYRHTP
Trigger: TGGCGTGTGCCTGTAATCCCAGATACTCAGGAGGCT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGTTCTGGACCACGTCCTaGCAGTATGTTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQFWTTS*QYVGRA
Trigger: TGCTCTTCCAACATACTGCCAGGACGTGGTCCAGAA...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGTGGGACAAATTCCCCTaGGAGGGGTGGAGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQWDKFP*EGWSFK
Trigger: TTTAAAGCTCCACCCCTCCCAGGGGAATTTGTCCCA...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGGGCTCGCCTGGAGGCTaGGGAAGCAGTTTACACGTC +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMGSPGG*GSSLHV
Trigger: GACGTGTAAACTGCTTCCCCAGCCTCCAGGCGAGCC...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399744.8
3UTR CAA 72 bp TCTGTTTACAGCTATGTTATTCACAATAGCAAAAAGTaGGTGGTGGTGCATGTGGGTGTTGACCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SVYSYVIHNSKK*VVVHVGVDRAG
Trigger: CCCAGCCCGGTCAACACCCACATGCACCACCACCAACTTTTTGCTATTGTGAATAACATAGCTGTAAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGGCCTCCTCAGAGCCTaGGTGTTCCTGTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNGLLRA*VFLFLL
Trigger: CAGCAGAAACAGGAACACTCAGGCTCTGAGGAGGCC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGCTCCATTAACATCCTaGCCTGAAGAACCAACCCCT +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVAPLTS*PEEPTP
Trigger: AGGGGTTGGTTCTTCAGGTCAGGATGTTAATGGAGC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCACTCCTGGCCACAAGTaGTCCACCCACCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSTPGHK*STHLTL
Trigger: AAGGGTGAGGTGGGTGGATCACTTGTGGCCAGGAGT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGACTCCTGGCCACAAGTaGTCCACCCACCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMTPGHK*STHLTL
Trigger: AAGGGTGAGGTGGGTGGATCACTTGTGGCCAGGAGT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAACCACACCCCAGCCTaGACAGTGAGAAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMNHTPA*TVRRLL
Trigger: CAGGAGCCTTCTCACTGTTCAGGCTGGGGTGTGGTT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCAACCACACCCCAGCCTaGACAGTGAGAAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSNHTPA*TVRRLL
Trigger: CAGGAGCCTTCTCACTGTTCAGGCTGGGGTGTGGTT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTCAACCCGGTGGTTCTaGAAACCACACCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLSTRWF*KPHPSL
Trigger: CAGGCTGGGGTGTGGTTTTCAGAACCACCGGGTTGA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCCCTTCCAGCTCACCTaGTTACTCAGTTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQPFQLT*LLSSIF
Trigger: GAAAATGGAACTGAGTAATCAGGTGAGCTGGAAGGG...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCCCTTCCAGCTCACCTaGTTACTCAGTTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQPFQLT*LLSSIF
Trigger: GAAAATGGAACTGAGTAATCAGGTGAGCTGGAAGGG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACGATGCTTGTGGCTGGTaGGAAAACAACACTGAAACA +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENDACGW*ENNTET
Trigger: TGTTTCAGTGTTGTTTTCTCACCAGCCACAAGCATC...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACGCAGAAAGAATTCTTTaGGTAAGCCTGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENAERIL*VSLEGG
Trigger: TCCACCTTCCAGGCTTACTCAAAGAATTCTTTCTGC...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCAATTACCCAGTCTCTaGTACTTCTCTAAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGQLPSL*YFSKAV
Trigger: CACTGCTTTAGAGAAGTATCAGAGACTGGGTAATTG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCTCAACCACCTAAGATaGGACTTCTGGGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQLNHLR*DFWAMS
Trigger: AGACATTGCCCAGAAGTCTCATCTTAGGTGGTTGAG...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACCTCCTAACCAACACTaGAACAACTGGTTGAATAGT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVPPNQH*NNWLNS
Trigger: ACTATTCAACCAGTTGTTTCAGTGTTGGTTAGGAGG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTGCTGTATAAAAGAATaGACAGCTCCAGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPCCIKE*TAPGLW
Trigger: CCAAAGTCCTGGAGCTGTGCATTCTTTTATACAGCA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGATTACCCCTCTTGGATaGATCTGCAACAAGCACTCC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQITPLG*ICNKHS
Trigger: GGAGTGCTTGTTGCAGATGCATCCAAGAGGGGTAAT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGAGGCACTATCTGTCCTaGTTGCACCCACCTCCACCC +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLRHYLS*LHPPPP
Trigger: GGGTGGAGGTGGGTGCAAGCAGGACAGATAGTGCCT...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGAGTTTCACTCTTTGTTaGCCAGGTGGGAGTGCAATG +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQSFTLC*PGGSAM
Trigger: CATTGCACTCCCACCTGGGCAACAAAGAGTGAAACT...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGCCTGGCTTGCGTTTaGCCAAAAGTAATAGTAAAG +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVSLACV*PKVIVK
Trigger: CTTTACTATTACTTTTGGGCAAACGCAAGCCAGGCT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGAGTGTGAACTGGCCTaGTTGTATCTCCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLECELA*LYLPSA
Trigger: CGCCGAGGGGAGATACAAGCAGGCCAGTTCACACTC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCAGGCCGTGGGTGGGTTaGTTGACTAGGCCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSRPWVG*LTRPES
Trigger: ACTCTCTGGCCTAGTCAAGCAACCCACCCACGGCCT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTCTTCACCAAGTCTCTaGTATTATCTGACACCTGTC +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPSSPSL*YYLTPV
Trigger: GACAGGTGTCAGATAATAGCAGAGACTTGGTGAAGA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAACCCAAGAGGAGGGTaGAGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNNPRGG*SEPRSH
Trigger: GTGCGATCTCGGCTCACTGCACCCTCCTCTTGGGTT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCTGGGAGGCAGAGCTTaGAGTGAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNLGGRA*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAAGCTCTGCCTCCCAG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGCTTTTGAATCAGACTaGTGTGGGGCAAACCCATGC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVAFESD*CGANPC
Trigger: GCATGGGTTTGCCCCACAGCAGTCTGATTCAAAAGC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCACAGGTGTGAGCCACTaGGCCCGGCTACATGCCTAT +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSTGVSH*ARLHAY
Trigger: ATAGGCATGTAGCCGGGCGCAGTGGCTCACACCTGT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGTCGGTCATCCCCTCCTaGTCTTGGTATTGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQSVIPS*SWYCVD
Trigger: ATCTACACAATACCAAGAGCAGGAGGGGATGACCGA...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCCCATGTGTCTCAGATaGTGCAGGGGATTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVPMCLR*CRGLRE
Trigger: TTCCCTTAATCCCCTGCAGCATCTGAGACACATGGG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTTCCAGGCACCCCATTaGTGGGGTGAGCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSFQAPH*WGEPMK
Trigger: CTTCATGGGCTCACCCCAGCAATGGGGTGCCTGGAA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTCCAGGTTTGGCTTCTaGGCCTCCTCAGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLSRFGF*ASSEPE
Trigger: CTCAGGCTCTGAGGAGGCCCAGAAGCCAAACCTGGA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGAGATGGAATGTTTCATaGACACAGTCCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQRWNVS*TQSLSP
Trigger: TGGGGACAGGGACTGTGTCCATGAAACATTCCATCT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGACAATTACAAGACCATaGGGTCACGACCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQTITRP*GHDHRS
Trigger: GCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTAGGCTTTGGAAAGCATaGAGGGGTTTCCACATATTA +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGRLWKA*RGFHIL
Trigger: TAATATGTGGAAACCCCTCCATGCTTTCCAAAGCCT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTTGGGCTGCTTTAAGTaGATAGCAGAGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVLGCFK*IAEATF
Trigger: GAAGGTGGCCTCTGCTATCCACTTAAAGCAGCCCAA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCACGGCTTTTCCGTGCTaGGAGGGAGGAAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSTAFPC*EGGKQR
Trigger: CCTCTGCTTTCCTCCCTCCCAGCACGGAAAAGCCGT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTCATGTTGGCCAGGCTaGTCTTGGCCTCCCGAAGTG +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLSCWPG*SWPPEV
Trigger: CACTTCGGGAGGCCAAGACCAGCCTGGCCAACATGA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCTGTTAACACGAACCTaGAAAGAGGTCCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQLLTRT*KEVQSS
Trigger: GGATGACTGGACCTCTTTCCAGGTTCGTGTTAACAG...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCATCCTGGATTAGGGTaGCTCTTAAATTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPHPGLG*LLNSVT
Trigger: TGTCACTGAATTTAAGAGCCACCCTAATCCAGGATG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCATCCTGGATTAGGGTaGCTCTTAAATTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGHPGLG*LLNSVT
Trigger: TGTCACTGAATTTAAGAGCCACCCTAATCCAGGATG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAGTAAACAGCATCGCTaGTCATCTACCTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVSKQHR*SSTCFE
Trigger: TTCAAAGCAGGTAGATGACCAGCGATGCTGTTTACT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCACTGTCGCCCAGGCTaGAGTGCAATAGCACGATCG +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSHCRPG*SAIARS
Trigger: CGATCGTGCTATTGCACTCCAGCCTGGGCGACAGTG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAGTCCTGGCAGTATGTTaGAAGAGCAGAAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVVLAVC*KSRKTD
Trigger: ATCAGTTTTTCTGCTCTTCCAACATACTGCCAGGAC...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCCTTTAAGGTTTACATaGCTGCAGCAGCCGCAATCA +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQPLRFT*LQQPQS
Trigger: TGATTGCGGCTGCTGCAGCCATGTAAACCTTAAAGG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAGAGCAGAGCTCAACTaGATCTGGAAGGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVRAELN*IWKGKP
Trigger: AGGTTTGCCCTTCCAGATCCAGTTGAGCTCTGCTCT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTATCCCGAGTTGGCCTaGGCGAAGAGGGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMYPELA*AKRESP
Trigger: AGGACTCTCCCTCTTCGCCCAGGCCAACTCGGGATA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399744.8
3UTR CAA 72 bp ATCACTTTACCCAGCGATAAGAGCTGTAAGGCTCACTaGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: ITLPSDKSCKAH*VFSSQPGGSEN
Trigger: GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTTATCGCTGGGTAAAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTATGGGAACAGCCTATTaGTACAGAATTAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGMGTAY*YRIRSA
Trigger: AGCTGATCTAATTCTGTATCAATAGGCTGTTCCCAT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGTGAGAAAACAACACTaGAACATTTCAGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGVRKQH*NISAPQ
Trigger: TTGAGGAGCTGAAATGTTTCAGTGTTGTTTTCTCAC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGCAGAAAGAATTCTTTaGGTAAGCCTGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQAERIL*VSLEGG
Trigger: TCCACCTTCCAGGCTTACTCAAAGAATTCTTTCTGC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACACATATGCTGGGACTaGGAAAGGTTTTTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVHICWD*ERFLCF
Trigger: AAAACACAAAAACCTTTCTCAGTCCCAGCATATGTG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAATGACACACAGCTATaGAGAATGAGGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVNDTQL*RMRLLH
Trigger: GTGGAGCAGCCTCATTCTTCATAGCTGTGTGTCATT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGAAGGTCAAAGCAGGTaGGTCAAGATACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQEGQSR*VKIQTQ
Trigger: CTGAGTTTGTATCTTGACTCACCTGCTTTGACCTTC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAACAGGAAAGATTATTTaGAGGTCAAAGCAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVTGKII*RSKQVS
Trigger: ACTCACCTGCTTTGACCTTCAAATAATCTTTCCTGT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTACAGGAAAGATTATTTaGAGGTCAAAGCAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGTGKII*RSKQVS
Trigger: ACTCACCTGCTTTGACCTTCAAATAATCTTTCCTGT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCCTCAATGGGGTTTTTaGCTGGGACTATTATCTAGG +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQPQWGF*LGLLSR
Trigger: CCTAGATAATAGTCCCAGTCAAAAACCCCATTGAGG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACATTGCACAGCTACTCTaGGCCTTGGAAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNIAQLL*ALEGGH
Trigger: GTGGCCACCTTCCAAGGCTCAGAGTAGCTGTGCAAT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTGCCCACATGCAGGATaGGGCCATTGTAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMCPHAG*GHCNAR
Trigger: CCTGGCATTACAATGGCCTCATCCTGCATGTGGGCA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGCTGAGCTCGCAGCCATaGTGGTTGCACACTGCCATT +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLLSSQP*WLHTAI
Trigger: AATGGCAGTGTGCAACCAGCATGGCTGCGAGCTCAG...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCTGAGCTCGCAGCCATaGTGGTTGCACACTGCCATT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLSSQP*WLHTAI
Trigger: AATGGCAGTGTGCAACCAGCATGGCTGCGAGCTCAG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCTGATGTTCACAAGATaGTGGGTTCTACCACTCCAA +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQLMFTR*WVLPLQ
Trigger: TTGGAGTGGTAGAACCCAGCATCTTGTGAACATCAG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGAGGAATCAGAAGTGCTaGCTTTTCTGTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQRNQKC*LFCGLM
Trigger: CATCAGACCACAGAAAAGGCAGCACTTCTGATTCCT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGCCTATGTAATTGTATaGACAGTTCTCTATTGGACC +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGAYVIV*TVLYWT
Trigger: GGTCCAATAGAGAACTGTGCATACAATTACATAGGC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCGCTGGTCATCTACCTaGTTTGAATTAATACCATTG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGRWSST*FELIPL
Trigger: CAATGGTATTAATTCAAAGCAGGTAGATGACCAGCG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGATTTGCAGGATTCTTaGATCCCTGGAATACCTGGC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVDLQDS*IPGIPG
Trigger: GCCAGGTATTCCAGGGATGCAAGAATCCTGCAAATC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGCAGCTTCAAGCGCATaGCAAGACCATGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSAASSA*QDHGNS
Trigger: GCTGTTCCCATGGTCTTGCCATGCGCTTGAAGCTGC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGTGTACTTGTAGGCTTTaGAAAGCATGGAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQCTCRL*KAWRGF
Trigger: GAAACCCCTCCATGCTTTCCAAAGCCTACAAGTACA...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTGGTGGTTGCCAGCCTaGCTTGCGTTTGCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSWWLPA*LAFAQK
Trigger: CTTTTGGGCAAACGCAAGCCAGGCTGGCAACCACCA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTAAGATGAGATCATCCTaGATTAGGGTGGCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPKMRSS*IRVALK
Trigger: TTTAAGAGCCACCCTAATCCAGGATGATCTCATCTT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGAGTACCCAATCTTTCTaGACCACGTCCTGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSTQSF*TTSWQY
Trigger: ATACTGCCAGGACGTGGTCCAGAAAGATTGGGTACT...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGAGGCTCTGTCACAGATaGGTAACCACCTTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLRLCHR*VTTFLR
Trigger: GCGGAGGAAGGTGGTTACCCATCTGTGACAGAGCCT...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGAGCTCAACTGGATCTaGAAGGGCAAACCTTTCATA +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQELNWI*KGKPFI
Trigger: TATGAAAGGTTTGCCCTTCCAGATCCAGTTGAGCTC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTCACCAGGCTTTTTCTaGACTTCCAGCTCCATTAAC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSPGFF*TSSSIN
Trigger: GTTAATGGAGCTGGAAGTTCAGAAAAAGCCTGGTGA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGACAGGCAGAACCTGGTaGAACAGCCAAGGGACAAGT +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLTGRTW*NSQGTS
Trigger: ACTTGTCCCTTGGCTGTTTCACCAGGTTCTGCCTGT...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGATTCTAAGGGGCCTGTaGAGTTTACCTACTTTACTC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQILRGL*SLPTLL
Trigger: GAGTAAAGTAGGTAAACTTCACAGGCCCCTTAGAAT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGTTTTGTTTCGTTTCTaGGACCAAGTTTCACTCTTT +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGVLFRF*DQVSLF
Trigger: AAAGAGTGAAACTTGGTCTCAGAAACGAAACAAAAC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCAATTACCCAGTCTCTaGTACTTCTCTAAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQQLPSL*YFSKAV
Trigger: CACTGCTTTAGAGAAGTATCAGAGACTGGGTAATTG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACCTGTGTCTTGAAGTATaGGTAAGAGATCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENLCLEV*VRDHFL
Trigger: CAGAAAGTGATCTCTTACTCATACTTCAAGACACAG...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCATCCATCAGAGAGCTaGCTTGCCCACATGCAGGAT +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSHPSES*LAHMQD
Trigger: ATCCTGCATGTGGGCAAGTCAGCTCTCTGATGGATG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTCTCTCAGGTGCTTTTaGATCAGACTGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLSLRCF*IRLLWG
Trigger: GCCCCACAGCAGTCTGATTCAAAAGCACCTGAGAGA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCTACTCAGCCCTTGGTaGTTTCACAGCACTTTCATA +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVLLSPW*FHSTFI
Trigger: TATGAAAGTGCTGTGAAATCACCAAGGGCTGAGTAG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCTTCACATATTGCTATaGGTATTGCAAAGTACCCAA +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGLHILL*VLQSTQ
Trigger: TTGGGTACTTTGCAATACTCATAGCAATATGTGAAG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCCTCTTGGATGCATCTaGAACAAGCACTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNPLGCI*NKHSPA
Trigger: AGCTGGGGAGTGCTTGTTGCAGATGCATCCAAGAGG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCTCAAGTGCATGGGCTaGCAAGAGGGTTGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLKCMG*QEGWVF
Trigger: AAACACCCAACCCTCTTGGCAGCCCATGCACTTGAG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGCTACAGGTTCTCAAGTaGATGGGCTGCCAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLLQVLK*MGCQEG
Trigger: ACCCTCTTGGCAGCCCATGCACTTGAGAACCTGTAG...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTCCTCAGCCATCATCTaGCGTGATGTGTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNSSAII*RDVSPS
Trigger: TGAGGGTGACACATCACGGCAGATGATGGCTGAGGA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCACCTGAGGCCCTTCTaGCAGCATACATTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNHLRPF*QHTFSV
Trigger: CACACTGAATGTATGCTGGCAGAAGGGCCTCAGGTG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACATGGTCACCCTATTCTaGTATCAAGCATTAGAACTC +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENMVTLF*YQALEL
Trigger: GAGTTCTAATGCTTGATAGCAGAATAGGGTGACCAT...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACACAGCACTTTCATATaGAATCTGTTTACAGCTATG +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVHSTFI*NLFTAM
Trigger: CATAGCTGTAAACAGATTGCATATGAAAGTGCTGTG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGACAGCTCCAGGACTTTaGGGGGTAGCTTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMTAPGL*GVAFQG
Trigger: TCCCTGAAAAGCTACCCCCCAAAGTCCTGGAGCTGT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGCTGGAAGGTTTTGATTaGCTGGGTCTTGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLLEGFD*LGLGAR
Trigger: CCTGGCTCCAAGACCCAGCCAATCAAAACCTTCCAG...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCTGGAAGGTTTTGATTaGCTGGGTCTTGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLEGFD*LGLGAR
Trigger: CCTGGCTCCAAGACCCAGCCAATCAAAACCTTCCAG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGGCAGAGAAAAGAAGTaGCTCACCGCAGAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLGREKK*LTAESQ
Trigger: TTGGGACTCTGCGGTGAGCCACTTCTTTTCTCTGCC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTACGAGCAGAAAAATTTaGGCATTACACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGTSRKI*ALHKQQ
Trigger: CTGTTGTTTGTGTAATGCCCAAATTTTTCTGCTCGT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGGGAGGCCTAGGTGGGTaGATCACAAGTTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMGGLGG*ITSSGD
Trigger: ATCTCCTGAACTTGTGATCCACCCACCTAGGCCTCC...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGTGATGGTGGGCAGCTaGAAGGCCGCACATATAATC +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNVMVGS*KAAHII
Trigger: GATTATATGTGCGGCCTTCCAGCTGCCCACCATCAC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCTCTGGGCAAGAAACTaGGGAATAGAGAGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLWARN*GIESGS
Trigger: ACTCCCGCTCTCTATTCCCCAGTTTCTTGCCCAGAG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGGCAAGGGTTGCCTCTaGGCAAGAAACTGGGGAATA +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLGKGCL*ARNWGI
Trigger: TATTCCCCAGTTTCTTGCCCAGAGGCAACCCTTGCC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGTCCAGAGTGTGAACTaGCCTGCTTGTATCTCCCCT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNVQSVN*PACISP
Trigger: AGGGGAGATACAAGCAGGCCAGTTCACACTCTGGAC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAAAAGGGGCAGTCAGTaGGGTCAGAGACAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMKRGSQ*GQRQGK
Trigger: CTTGCCTTGTCTCTGACCCCACTGACTGCCCCTTTT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACCAAATCTTTATTACTTaGCCTCTTACATGGATGGCC +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENQIFIT*PLTWMA
Trigger: GGCCATCCATGTAAGAGGCCAAGTAATAAAGATTTG...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGGTAATCCCAACGCTTTaGAAGGCTGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMVIPTL*KAEAGG
Trigger: TCCACCTGCCTCAGCCTTCCAAAGCGTTGGGATTAC...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGAGGGTGAACCATTTTaGCCACTGGATCACAAACAA +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVEGEPF*PLDHKQ
Trigger: TTGTTTGTGATCCAGTGGCCAAAATGGTTCACCCTC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTCAGCTCCGGGCTCCTaGTTACGATCAAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMSAPGS*LRSKTH
Trigger: GTGAGTCTTTGATCGTAACCAGGAGCCCGGAGCTGA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTCCCCATCTTGGAGGTaGGAAAAATTGGACCCGAGA +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLSPSWR*EKLDPR
Trigger: TCTCGGGTCCAATTTTTCTCACCTCCAAGATGGGGA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACATAATGGTACATTGCTaGCTAAATACTTTCGGACCA +
Preference number: 4 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENIMVHC*LNTFGP
Trigger: TGGTCCGAAAGTATTTAGTCAGCAATGTACCATTAT...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAGCCATCATCTGCCGTaGTGTGTCACCCTCAATCAT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMSHHLP*CVTLNH
Trigger: ATGATTGAGGGTGACACATCACGGCAGATGATGGCT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAGCCATCATCTGCCGTaGTGTGTCACCCTCAATCAT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNSHHLP*CVTLNH
Trigger: ATGATTGAGGGTGACACATCACGGCAGATGATGGCT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCCTCCTAACCAACACTaGAACAACTGGTTGAATAGT +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVPPNQH*NNWLNS
Trigger: ACTATTCAACCAGTTGTTTCAGTGTTGGTTAGGAGG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTATACAGACTTGAACCATaGCCTAAGGATTTAATTCTA +
Preference number: 4 (lower is better)
Translates to: VKLFPTEMVSHSSISACVYRLEP*PKDLIL
Trigger: TAGAATTAAATCCTTAGGGCATGGTTCAAGTCTGTA...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCGCAGCCATGCTGGTTaGACACTGCCATTTTCTACA +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNRSHAG*TLPFST
Trigger: TGTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTCTTCACCAAGTCTCTaGTATTATCTGACACCTGTC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVSSPSL*YYLTPV
Trigger: GACAGGTGTCAGATAATAGCAGAGACTTGGTGAAGA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTGGTGCGGGTCTTATTaGTCACCAACTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNWCGSY*SPTLAA
Trigger: AGCAGCAAGAGTTGGTGAGCAATAAGACCCGCACCA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTGGTGCGGGTCTTATTaGTCACCAACTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMWCGSY*SPTLAA
Trigger: AGCAGCAAGAGTTGGTGAGCAATAAGACCCGCACCA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCCTCATTCTCTCTGCTaGTGCCATGTAAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMPHSLC*CHVRCA
Trigger: GGCACATCTTACATGGCAGCAGCAGAGAGAATGAGG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCAATATCCAGGATGCTaGTCCAGGATGGTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMQYPGC*SRMVGV
Trigger: AACACCCACCATCCTGGAGCAGCATCCTGGATATTG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTTGGGCTGCTTTAAGTaGATAGCAGAGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLLGCFK*IAEATF
Trigger: GAAGGTGGCCTCTGCTATCCACTTAAAGCAGCCCAA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGGCCAGACATTTTTCTaGTTAACACTCCATGTATTC +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQGQTFF*LTLHVF
Trigger: GAATACATGGAGTGTTAACCAGAAAAATGTCTGGCC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGATTATTTCTGAGTGGTaGGATCACGAGTCCTGTATT +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQIISEW*DHESCI
Trigger: AATACAGGACTCGTGATCCCACCACTCAGAAATAAT...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGACTTGGCCTCTTACATaGATGGCCTCATTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLTWPLT*MASFQV
Trigger: CACCTGGAATGAGGCCATCCATGTAAGAGGCCAAGT...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGAAAAAGATACAAACTTaGGCATTATGGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQKKIQT*ALWVWD
Trigger: GTCCCAGACCCATAATGCCCAAGTTTGTATCTTTTT...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCTGGTGGGAGGTGACTaGATCACAGGAACAGTTTCT +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLVGGD*ITGTVS
Trigger: AGAAACTGTTCCTGTGATCCAGTCACCTCCCACCAG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCTGGTGGGAGGTGACTaGATCACAGGAACAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNLVGGD*ITGTVS
Trigger: AGAAACTGTTCCTGTGATCCAGTCACCTCCCACCAG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCAGCCAAAGGACAGTTaGAGGAATCGAGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNQPKDS*RNRASC
Trigger: GCATGAAGCTCGATTCCTCCAACTGTCCTTTGGCTG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTTCTGGACCACGTCCTaGCAGTATGTTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNFWTTS*QYVGRA
Trigger: TGCTCTTCCAACATACTGCCAGGACGTGGTCCAGAA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTATTCTGGAAGGTTTTaGTTGGCTGGGTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMYSGRF*LAGSWS
Trigger: GCTCCAAGACCCAGCCAATCAAAACCTTCCAGAATA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGACAACCTGGAAAATTaGGCTGAAGACCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSDNLEN*AEDQEA
Trigger: TGCCTCTTGGTCTTCAGCTCAATTTTCCAGGTTGTC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCACAGCTATGAAGAATaGGGCTGCTCCACATATGCT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMHSYEE*GCSTYA
Trigger: AGCATATGTGGAGCAGCCTCATTCTTCATAGCTGTG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAATAGTAAAGAGCTCTaGCCACTGCTGCTCACCCTA +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMNSKEL*PLLLTL
Trigger: TAGGGTGAGCAGCAGTGGTCAGAGCTCTTTACTATT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGTGGATAGTACAAAAGTaGCAAGAGGATGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQWIVQK*QEDAKS
Trigger: ACTTTTAGCATCCTCTTGTCACTTTTGTACTATCCA...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTCCTGGCTAACACGGTaGAACCCAGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLSWLTR*NPVSTK
Trigger: TTTAGTAGAGACTGGGTTTCACCGTGTTAGCCAGGA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGGACCCGAGATTAAATaGCTTATGCAAAGTTATAGG +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVGPEIK*LMQSYR
Trigger: CCTATAACTTTGCATAAGTCATTTAATCTCGGGTCC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCTGTGTCTTGAAGTATaGGTAAGAGATCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVLCLEV*VRDHFL
Trigger: CAGAAAGTGATCTCTTACTCATACTTCAAGACACAG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGTTGATGTGTTTCTCCTaGAACACCTTCTTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQLMCFS*NTFLCL
Trigger: TAAACACAAGAAGGTGTTTCAGGAGAAACACATCAA...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTCACCAAAGAGGAGGTaGATCATGGGACAAATTCCC +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLSPKRR*IMGQIP
Trigger: GGGAATTTGTCCCATGATTCACCTCCTCTTTGGTGA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTGTGCCTGCTGGTCCTaGTTTGTTTCCACATCATCT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNCACWS*FVSTSS
Trigger: AGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGAAGAACCAACCCCTTaGCTTCACCAAGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLEEPTP*LHQEDG
Trigger: TCCATCTTCTTGGTGAAGGCAAGGGGTTGGTTCTTC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGTTGCCAGCCTGGCTTaGGTTTGCCCAAAAGTAATA +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNVASLA*VCPKVI
Trigger: TATTACTTTTGGGCAAACGCAAGCCAGGCTGGCAAC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTTGCTCACCAACTCTTaGTGCTTCTATTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVLLTNS*CFYFFL
Trigger: AAGGAAGAAATAGAAGCAGCAAGAGTTGGTGAGCAA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTCGGTCATCCCCTCCTaGTCTTGGTATTGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSSVIPS*SWYCVD
Trigger: ATCTACACAATACCAAGAGCAGGAGGGGATGACCGA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCGCATGGCAAGACCATaGGAACAGCCTATTGATACA +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNRMARP*EQPIDT
Trigger: TGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCGCAATTACCCCTCTTaGATGCATCTGCAACAAGCA +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMRNYPS*MHLQQA
Trigger: TGCTTGTTGCAGATGCATCCAAGAGGGGTAATTGCG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTTTGGGAGGTCAAGATaGGAGGATCACTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMFGRSR*EDHLRQ
Trigger: TTGCCTCAAGTGATCCTCCCATCTTGACCTCCCAAA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAGTACCCAATCTTTCTaGACCACGTCCTGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNSTQSF*TTSWQY
Trigger: ATACTGCCAGGACGTGGTCCAGAAAGATTGGGTACT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGGATCACAAACAAATTaGCTCGCCTTTAAGGTTTAC +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVGSQTN*LAFKVY
Trigger: GTAAACCTTAAAGGCGAGCCAATTTGTTTGTGATCC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAGAAAGGGAAGAACCTaGAATGGTGTGTACCAAGGA +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMRKGRT*NGVYQG
Trigger: TCCTTGGTACACACCATTTCAGGTTCTTCCCTTTCT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGCAGCAAATCCACTGTTaGTACGCAATTACCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLQQIHC*YAITPL
Trigger: AAGAGGGGTAATTGCGTATCAACAGTGGATTTGCTG...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGATGCATGCATTTTTCTaGGGGCAAGAACCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMMHAFF*GQEPVG
Trigger: ACCTACAGGTTCTTGCCCTCAGAAAAATGCATGCAT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGAAGGTCAAAGCAGGTaGGTCAAGATACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNEGQSR*VKIQTQ
Trigger: CTGAGTTTGTATCTTGACTCACCTGCTTTGACCTTC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCTACTCAGCCCTTGGTaGTTTCACAGCACTTTCATA +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLLSPW*FHSTFI
Trigger: TATGAAAGTGCTGTGAAATCACCAAGGGCTGAGTAG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCTTCACATATTGCTATaGGTATTGCAAAGTACCCAA +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVLHILL*VLQSTQ
Trigger: TTGGGTACTTTGCAATACTCATAGCAATATGTGAAG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGTACAGACTTGAACCATaGCCTAAGGATTTAATTCTA +
Preference number: 4 (lower is better)
Translates to: FKRMARPWEQPIDTELDQYRLEP*PKDLIL
Trigger: TAGAATTAAATCCTTAGGGCATGGTTCAAGTCTGTA...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCACAGCACTTTCATATaGAATCTGTTTACAGCTATG +
Preference number: 4 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVHSTFI*NLFTAM
Trigger: CATAGCTGTAAACAGATTGCATATGAAAGTGCTGTG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTTATCCAGTGAGCCATaGGAAGCCATTGAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLSSEP*EAIEAF
Trigger: AAACGCTTCAATGGCTTCCCATGGCTCACTGGATAA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGACAGAAGAGGATTACTaGTTCCTGCTTTCCTTAGCG +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMTEEDY*FLLSLA
Trigger: CGCTAAGGAAAGCAGGAACCAGTAATCCTCTTCTGT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTGTACTTGTAGGCTTTaGAAAGCATGGAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSCTCRL*KAWRGF
Trigger: GAAACCCCTCCATGCTTTCCAAAGCCTACAAGTACA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGATAGCAAAAAGTTGGTaGTGGTGCATGTGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLIAKSW*WCMWVL
Trigger: CAACACCCACATGCACCACCACCAACTTTTTGCTAT...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGAGGGTGAACCATTTTaGCCACTGGATCACAAACAA +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLEGEPF*PLDHKQ
Trigger: TTGTTTGTGATCCAGTGGCCAAAATGGTTCACCCTC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAGGTCAAAATCAGCATaGGTCTTTTCCTGCACTGAT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMRSKSA*VFSCTD
Trigger: ATCAGTGCAGGAAAAGACTCATGCTGATTTTGACCT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAGGTCAAAATCAGCATaGGTCTTTTCCTGCACTGAT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNRSKSA*VFSCTD
Trigger: ATCAGTGCAGGAAAAGACTCATGCTGATTTTGACCT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTGCTGTATAAAAGAATaGACAGCTCCAGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMCCIKE*TAPGLW
Trigger: CCAAAGTCCTGGAGCTGTGCATTCTTTTATACAGCA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAGCCTGGCTTGCGTTTaGCCAAAAGTAATAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMSLACV*PKVIVK
Trigger: CTTTACTATTACTTTTGGGCAAACGCAAGCCAGGCT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCCTTCACCAAGAAGATaGAATGTTTCATGGACACAG +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNPSPRR*NVSWTQ
Trigger: CTGTGTCCATGAAACATTCCATCTTCTTGGTGAAGG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCTCATAAGATGCTTGTaGCTGGTGAGAAAACAACAC +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLIRCL*LVRKQH
Trigger: GTGTTGTTTTCTCACCAGCCACAAGCATCTTATGAG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCAGGCTTTGGAAAGCATaGAGGGGTTTCCACATATTA +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSRLWKA*RGFHIL
Trigger: TAATATGTGGAAACCCCTCCATGCTTTCCAAAGCCT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGTCCTGGCAGTATGTTaGAAGAGCAGAAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSVLAVC*KSRKTD
Trigger: ATCAGTTTTTCTGCTCTTCCAACATACTGCCAGGAC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGGTGAGAAAACAACACTaGAACATTTCAGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMVRKQH*NISAPQ
Trigger: TTGAGGAGCTGAAATGTTTCAGTGTTGTTTTCTCAC...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCACATATGCTGGGACTaGGAAAGGTTTTTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMHICWD*ERFLCF
Trigger: AAAACACAAAAACCTTTCTCAGTCCCAGCATATGTG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAATAGTAATTATTTCTaGGTGGTGGGATCACGAGTC +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMNSNYF*VVGSRV
Trigger: GACTCGTGATCCCACCACTCAGAAATAATTACTATT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTCATCAGACAGAATTTaGTGCTGTGGTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNSSDRI*CCGWIC
Trigger: ACATATCCAACCACAGCATCAAATTCTGTCTGATGA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGGTTTTATTGTTCACTaGCTTCAAAACCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSGFIVH*LQNPCL
Trigger: GAGACATGGGTTTTGAAGGCAGTGAACAATAAAACC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGTATCTGTTCTATGTTaGATGCTTCAGAACCCTGTA +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLVSVLC*MLQNPV
Trigger: TACAGGGTTCTGAAGCATGCAACATAGAACAGATAC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGATAATAACTAGCACCTaGTCACTACATGCTATGCAC +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLIITST*SLHAMH
Trigger: GTGCATAGCATGTAGTGAGCAGGTGCTAGTTATTAT...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGCCTATGTAATTGTATaGACAGTTCTCTATTGGACC +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLAYVIV*TVLYWT
Trigger: GGTCCAATAGAGAACTGTGCATACAATTACATAGGC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCTGCGCCCGGCTACATaGCTATTTTTAATAAATGTA +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLRPAT*LFLINV
Trigger: TACATTTATTAAAAATAGGCATGTAGCCGGGCGCAG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACATGGTCACCCTATTCTaGTATCAAGCATTAGAACTC +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNMVTLF*YQALEL
Trigger: GAGTTCTAATGCTTGATAGCAGAATAGGGTGACCAT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCAGAAGGAACACTGCATaGTTACTAACATGGATTAGG +
Preference number: 4 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSRRNTA*LLTWIR
Trigger: CCTAATCCATGTTAGTAACCATGCAGTGTTCCTTCT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGGATCACAAACAAATTaGCTCGCCTTTAAGGTTTAC +
Preference number: 4 (lower is better)
Translates to: KRKKSLLSETVSGGINRLGSQTN*LAFKVY
Trigger: GTAAACCTTAAAGGCGAGCCAATTTGTTTGTGATCC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTGGATAGTACAAAAGTaGCAAGAGGATGCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNWIVQK*QEDAKS
Trigger: ACTTTTAGCATCCTCTTGTCACTTTTGTACTATCCA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTTGATGTGTTTCTCCTaGAACACCTTCTTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNLMCFS*NTFLCL
Trigger: TAAACACAAGAAGGTGTTTCAGGAGAAACACATCAA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR TCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTTGGTATTGTGTAGATaGTTAACTGTTCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNLVLCR*LTVPLS
Trigger: AGAAAGGGGAACAGTTAATCATCTACACAATACCAA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTTAAATTCAGTGACATaGATCCTTGGCAGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLNSVT*ILGRED
Trigger: ATCTTCTCTGCCAAGGATGCATGTCACTGAATTTAA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACACGAGCAGAAAAATTTaGGCATTACACAAACAACAG +
Preference number: 4 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNTSRKI*ALHKQQ
Trigger: CTGTTGTTTGTGTAATGCCCAAATTTTTCTGCTCGT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR GCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAATAAGAAGGAACACTaGATGGTTACTAACATGGAT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMNKKEH*MVTNMD
Trigger: ATCCATGTTAGTAACCATGCAGTGTTCCTTCTTATT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CCA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGGCATGGTTACTAACATaGATTAGGGGATTGAATTTT +
Preference number: 4 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMAWLLT*IRGLNF
Trigger: AAAATTCAATCCCCTAATCCATGTTAGTAACCATGC...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp TGGCACAGTGTGTGTAGTGTATGTGACTACTATCATTaGTGTAAGAGAAAGAAAAGTTTACTATCAGAGACT +
Preference number: 4 (lower is better)
Translates to: WHSVCSVCDYYH*CKRKKSLLSET
Trigger: AGTCTCTGATAGTAAACTTTTCTTTCTCTTACACAAATGATAGTAGTCACATACACTACACACACTGTGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
3UTR CAA 72 bp TATCTAGATTCAGGTACTTGTCATATGTATTTAACTTaGGTTAGCCCCAAGTACCTTACATACATTCACCCA +
Preference number: 4 (lower is better)
Translates to: YLDSGTCHMYLT*VSPKYLTYIHP
Trigger: TGGGTGAATGTATGTAAGGTACTTGGGGCTAACCAAAGTTAAATACATATGACAAGTACCTGAATCTAGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS GCA 90 bp TATCCCGAGTTGGCCTCGCCTCCCGGCAGCGGGCGCGGACATCTTTaGGCTCGCCCAGCCCCGCAGCCGCGCGGCGTCCCGGCGGCGCGG +
Preference number: 5 (lower is better)
Translates to: YPELASPPGSGRGHL*ARPAPQPRGVPAAR
Trigger: CCGCGCCGCCGGGACGCCGCGCGGCTGCGGGGCTGGGCGAGCGCAAAGATGTCCGCGCCCGCTGCCGGGAGGCGAGGCCAACTCGGGATA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329627.11
CDS GCA 90 bp GAGGTGCCCGCGGGTTCCTCTGCCACGGCGTGGTTGGCCAGACTCTaGCAGGCCCGCTCGCAGGTCTCCAGCGCCGCCCGGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: EVPAGSSATAWLARL*QARSQVSSAARKSR
Trigger: CCTGGACTTCCGGGCGGCGCTGGAGACCTGCGAGCGGGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAGAGGAACCCGCGGGCACCTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CCA 90 bp TCACCTCCAATGAGGTGCCCGCGGGTTCCTCTGCCACGGCGTGGTTaGCCAGACTCTGCCAGGCCCGCTCGCAGGTCTCCAGCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: SPPMRCPRVPLPRRG*PDSARPARRSPAPP
Trigger: GGGCGGCGCTGGAGACCTGCGAGCGGGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAGAGGAACCCGCGGGCACCTCATTGGAGGTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CCA 90 bp TCCGGCCCCGCGACACGTGCAGGAACTGCCTCAGCTCCGGGCTCCTaGTTACGATCAAAGACTCACCTCGCCTCCCGGCAGCGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: SGPATRAGTASAPGS*LRSKTHLASRQRAR
Trigger: CCGCGCCCGCTGCCGGGAGGCGAGGTGAGTCTTTGATCGTAACCAGGAGCCCGGAGCTGAGGCAGTTCCTGCACGTGTCGCGGGGCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS CCA 90 bp CACTTCACCTCCAATGAGGTGCCCGCGGGTTCCTCTGCCACGGCGTaGTTGGCCAGACTCTGCCAGGCCCGCTCGCAGGTCTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: HFTSNEVPAGSSATA*LARLCQARSQVSSA
Trigger: GGCGCTGGAGACCTGCGAGCGGGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAGAGGAACCCGCGGGCACCTCATTGGAGGTGAAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCGGGCGCGGACATCTTaGCGCTCGCCCAGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQRARTS*RSPSPA
Trigger: TGCGGGGCTGGGCGAGCGCAAAGATGTCCGCGCCCG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS CCA 90 bp GGAGTGACCGCCTCCCCAGAGGCTCCGGGATATCCCGAGTTGGCCTaGGCGAAGAGGGAGAGTCCTCATCTCTTTGCCCACACCCCTTCC +
Preference number: 5 (lower is better)
Translates to: GVTASPEAPGYPELA*AKRESPHLFAHTPS
Trigger: GGAAGGGGTGTGGGCAAAGAGATGAGGACTCTCCCTCTTCGCCCAGGCCAACTCGGGATATCCCGGAGCCTCTGGGGAGGCGGTCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGCGGGCGCGGACATCTTaGCGCTCGCCCAGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWRARTS*RSPSPA
Trigger: TGCGGGGCTGGGCGAGCGCAAAGATGTCCGCGCCCG...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGTCTGCCACGGCGTGGTaGGCCAGACTCTGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGSATAW*ARLCQA
Trigger: GGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAGA...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCCGGGATATCCCGAGTaGGCCTCGCCTCCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: CACWSCFVSTSSTATSRSPGYPE*ASPPGS
Trigger: GCTGCCGGGAGGCGAGGCCAACTCGGGATATCCCGG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329627.11
CDS GCA 90 bp CAGGGACCCTCAGTCACGGATGCGGAGCTGGTAGAGGCGAGAAAATaGAGCCTTCCGGATCCAGCGGAAGAGCTGGGCCAGCTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: QGPSVTDAELVEARK*SLPDPAEELGQLVE
Trigger: CTCTACAAGCTGGCCCAGCTCTTCCGCTGGATCCGGAAGGCTGCATTTTCTCGCCTCTACCAGCTCCGCATCCGTGACTGAGGGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAGCCAAGGGACAAGTTaGCAGGGCGGGAGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQSQGTS*QGGREG
Trigger: CCCTTCCCTCCCGCCCTGCAAACTTGTCCCTTGGCT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGTGGACCACCTGAGGTaGGGAGTTCGAGACCAGCCA +
Preference number: 5 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGVDHLR*GVRDQP
Trigger: TGGCTGGTCTCGAACTCCCAACCTCAGGTGGTCCAC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCACTATCTGTCCTGCTaGCACCCACCTCCACCCAGG +
Preference number: 5 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSHYLSC*HPPPPR
Trigger: CCTGGGTGGAGGTGGGTGCAAGCAGGACAGATAGTG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGCATCTTCACCTGCAGTaGTCCGGCCAACATGGCCCC +
Preference number: 5 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSHLHLQ*SGQHGP
Trigger: GGGGCCATGTTGGCCGGACAACTGCAGGTGAAGATG...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGATGGAGGTCATGATGTaGAGGGAGGCTGGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGMEVMM*REAGSP
Trigger: TGGGCTCCCAGCCTCCCTCAACATCATGACCTCCAT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGATTTGGATCCAGCCCTaGGTGAGTGGGCCTTGGACT +
Preference number: 5 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGIWIQP*VSGPWT
Trigger: AGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAAT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS GCA 90 bp CTGGAGGCTGGGGAAGCAGTTTACACGTCAGATTTGCAGGATTCTTaGATCCCTGGAATACCTGGCCCTAGCTTCTCCGGCCCCGCGACA +
Preference number: 5 (lower is better)
Translates to: LEAGEAVYTSDLQDS*IPGIPGPSFSGPAT
Trigger: TGTCGCGGGGCCGGAGAAGCTAGGGCCAGGTATTCCAGGGATGCAAGAATCCTGCAAATCTGACGTGTAAACTGCTTCCCCAGCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS GCA 90 bp GCTGGGCTCGCCTGGAGGCTGGGGAAGCAGTTTACACGTCAGATTTaGAGGATTCTTGCATCCCTGGAATACCTGGCCCTAGCTTCTCCG +
Preference number: 5 (lower is better)
Translates to: AGLAWRLGKQFTRQI*RILASLEYLALASP
Trigger: CGGAGAAGCTAGGGCCAGGTATTCCAGGGATGCAAGAATCCTGCAAATCTGACGTGTAAACTGCTTCCCCAGCCTCCAGGCGAGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS CCA 90 bp ACCCAGGAGAGGACTTCTTGCCACCGATCCATTTCTGCCAGGGCCTaGATCCCCACAACACACAGGGAGCACTTCACCTCCAATGAGGTG +
Preference number: 5 (lower is better)
Translates to: TQERTSCHRSISARA*IPTTHREHFTSNEV
Trigger: CACCTCATTGGAGGTGAAGTGCTCCCTGTGTGTTGTGGGGATCCAGGCCCTGGCAGAAATGGATCGGTGGCAAGAAGTCCTCTCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS-3UTR CAA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCAGAGCCTTCCAGGTTaGGCTTCTGGGCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: CACWSCFVSTSSTATSRSQSLPG*ASGPPQ
Trigger: CTGAGGAGGCCCAGAAGCCAAACCTGGAAGGCTCTG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGACAGACTGGCAAGGGTaGCCTCTGGGCAAGAAACTG +
Preference number: 5 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSTDWQG*PLGKKL
Trigger: CAGTTTCTTGCCCAGAGGCAACCCTTGCCAGTCTGT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCCCAACCCCACATATTaGGATCCAGCCCTTGGTGAG +
Preference number: 5 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQPNPTY*DPALGE
Trigger: CTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGGACACCCGCCAGGCTTaGTCATTGCTGGTACATCTG +
Preference number: 5 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSDTRQA*SLLVHL
Trigger: CAGATGTACCAGCAATGACAAAGCCTGGCGGGTGTC...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCACCAGCCCACTGGCTaGGAGAGGCTGCAGCTATTG +
Preference number: 5 (lower is better)
Translates to: CACWSCFVSTSSTATSRSHQPTG*ERLQLL
Trigger: CAATAGCTGCAGCCTCTCCAAGCCAGTGGGCTGGTG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS GCA 90 bp ATACTGAAGGACCCAGGAGAGGACTTCTTGCCACCGATCCATTTCTaGCAGGGCCTGGATCCCCACAACACACAGGGAGCACTTCACCTC +
Preference number: 5 (lower is better)
Translates to: ILKDPGEDFLPPIHF*QGLDPHNTQGALHL
Trigger: GAGGTGAAGTGCTCCCTGTGTGTTGTGGGGATCCAGGCCCTGGCAGAAATGGATCGGTGGCAAGAAGTCCTCTCCTGGGTCCTTCAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CCA 90 bp CAGCAGCACCCGCTGCACGTGAAATTCTGCCAAGGCTCCATATTCTaGAAGGTTTTGATTGGCTGGGTCTTGGAGCCAGGCACCCACCAC +
Preference number: 5 (lower is better)
Translates to: QQHPLHVKFCQGSIF*KVLIGWVLEPGTHH
Trigger: GTGGTGGGTGCCTGGCTCCAAGACCCAGCCAATCAAAACCTTCCAGAATATGGAGCCTTGGCAGAATTTCACGTGCAGCGGGTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS-3UTR CAA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGGGTTGCCAGCCTGGCTaGCGTTTGCCCAAAAGTAAT +
Preference number: 5 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSGCQPG*RLPKSN
Trigger: ATTACTTTTGGGCAAACGCAAGCCAGGCTGGCAACC...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGGCGGTGAGGCCGACCTaGGCCAGGCCGTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQAVRPT*ARPWVG
Trigger: ACCCACCCACGGCCTGGCCAAGGTCGGCCTCACCGC...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGATTTGGATCCAGCCCTaGGTGAGTGGGCCTTGGACT +
Preference number: 5 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWIWIQP*VSGPWT
Trigger: AGTCCAAGGCCCACTCACCAAGGGCTGGATCCAAAT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGCCTGTCCGTCCCACCTaGGATAGTACAAAAGTGACA +
Preference number: 5 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGPVRPT*DSTKVT
Trigger: TGTCACTTTTGTACTATCCAAGGTGGGACGGACAGG...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTATCTACCTCGCTGGCTaGAACCCAAGAGGAGGGTGC +
Preference number: 5 (lower is better)
Translates to: CACWSCFVSTSSTATSRSIYLAG*NPRGGC
Trigger: GCACCCTCCTCTTGGGTTCAAGCCAGCGAGGTAGAT...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGACCTACTGGAGCGGATaGCTGGATTTAGCACATGGC +
Preference number: 5 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSTYWSG*LDLAHG
Trigger: GCCATGTGCTAAATCCAGCAATCCGCTCCAGTAGGT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS CCA 90 bp AAGGAAGGGGCCTATCTGAGGCAAAAGCTGGGCTCGCCTGGAGGCTaGGGAAGCAGTTTACACGTCAGATTTGCAGGATTCTTGCATCCC +
Preference number: 5 (lower is better)
Translates to: KEGAYLRQKLGSPGG*GSSLHVRFAGFLHP
Trigger: GGGATGCAAGAATCCTGCAAATCTGACGTGTAAACTGCTTCCCCAGCCTCCAGGCGAGCCCAGCTTTTGCCTCAGATAGGCCCCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAGCTGTAAGGCTCACTaGGTTTTCAGTAGTCAACCC +
Preference number: 5 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGSCKAH*VFSSQP
Trigger: GGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAAGTTTCACTCTTTGTaGCCCAGGTGGGAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGKFHSL*PRWECN
Trigger: ATTGCACTCCCACCTGGGCAACAAAGAGTGAAACTT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGGGTTGCCAGCCTGGCTaGCGTTTGCCCAAAAGTAAT +
Preference number: 5 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWGCQPG*RLPKSN
Trigger: ATTACTTTTGGGCAAACGCAAGCCAGGCTGGCAACC...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCATGTAAGATGTGCCTaGCTTCCCCTTTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQHVRCA*LPLCLP
Trigger: TGGAAGGCAAAGGGGAAGCAAGGCACATCTTACATG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTTTGGCCAGGCTGGTCTaGGCCTCCCGAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGLARLV*ASRSAG
Trigger: CCCAGCACTTCGGGAGGCCAAGACCAGCCTGGCCAA...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCCGGGATATCCCGAGTaGGCCTGGGCGAAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPPGYPE*AWAKRE
Trigger: CTCCCTCTTCGCCCAGGCCAACTCGGGATATCCCGG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAGCTGTAAGGCTCACTaGGTTTTCAGTAGTCAACCC +
Preference number: 5 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQSCKAH*VFSSQP
Trigger: GGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGAAGTTTCACTCTTTGTaGCCCAGGTGGGAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQKFHSL*PRWECN
Trigger: ATTGCACTCCCACCTGGGCAACAAAGAGTGAAACTT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTATAATCCCAGCACTTaGGGAGGTCAAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWYNPST*GGQDGR
Trigger: CCTCCCATCTTGACCTCCCAAAGTGCTGGGATTATA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGAGCCCAGAGAAAGGGTaGATTTGTGGTTGCCTATGT +
Preference number: 5 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSSPEKG*ICGCLC
Trigger: ACATAGGCAACCACAAATCAACCCTTTCTCTGGGCT...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGATCTCTCAGGTGCTTTaGAATCAGACTGCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWISQVL*NQTAVG
Trigger: CCCCACAGCAGTCTGATTCAAAAGCACCTGAGAGAT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGGAGAGGCTGCAGCTATaGAGGATAGAACAATACATC +
Preference number: 5 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGERLQL*RIEQYI
Trigger: GATGTATTGTTCTATCCTCAATAGCTGCAGCCTCTC...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCACAATAGCAAAAAGTaGGTGGTGGTGCATGTGGGT +
Preference number: 5 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQHNSKK*VVVHVG
Trigger: ACCCACATGCACCACCACCAACTTTTTGCTATTGTG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS CCA 90 bp TTGAAGGGCAGAGAAAAGAAGTGGCTCACCGCAGAGTCCCAAAGCTaGCGAACCAACATCGGTAGTGACAGGAACTTGTGGGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: LKGREKKWLTAESQS*RTNIGSDRNLWETE
Trigger: CTCTGTCTCCCACAAGTTCCTGTCACTACCGATGTTGGTTCGCCAGCTTTGGGACTCTGCGGTGAGCCACTTCTTTTCTCTGCCCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGATTGCTCACCAACTCTaGCTGCTTCTATTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGIAHQL*LLLFLP
Trigger: AGGAAGAAATAGAAGCAGCAAGAGTTGGTGAGCAAT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGTATCATGAGTCCTCTTaGTCCCAGCAGCTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWYHESS*SQQLWH
Trigger: ATGCCAAAGCTGCTGGGACAAAGAGGACTCATGATA...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACACCAGCCCACTGGCTaGGAGAGGCTGCAGCTATTG +
Preference number: 5 (lower is better)
Translates to: VKLFPTEMVSHSSISACVHQPTG*ERLQLL
Trigger: CAATAGCTGCAGCCTCTCCAAGCCAGTGGGCTGGTG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGTGTTCTACTCAGCCCTaGGTGATTTCACAGCACTTT +
Preference number: 5 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQCSTQP*VISQHF
Trigger: AAAGTGCTGTGAAATCACCAAGGGCTGAGTAGAACA...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS CCA 90 bp ATCAAGGCAGCCAGGAGACTCTTTTTGAAGGGCAGAGAAAAGAAGTaGCTCACCGCAGAGTCCCAAAGCTGGCGAACCAACATCGGTAGT +
Preference number: 5 (lower is better)
Translates to: IKAARRLFLKGREKK*LTAESQSWRTNIGS
Trigger: ACTACCGATGTTGGTTCGCCAGCTTTGGGACTCTGCGGTGAGCCACTTCTTTTCTCTGCCCTTCAAAAAGAGTCTCCTGGCTGCCTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACTGTGAACTGGCCTGCTaGTATCTCCCCTCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENCELAC*YLPSAA
Trigger: TGCCGCCGAGGGGAGATACAAGCAGGCCAGTTCACA...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGCGGTGAGGCCGACCTaGGCCAGGCCGTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSAVRPT*ARPWVG
Trigger: ACCCACCCACGGCCTGGCCAAGGTCGGCCTCACCGC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTATCTACCTCGCTGGCTaGAACCCAAGAGGAGGGTGC +
Preference number: 5 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGIYLAG*NPRGGC
Trigger: GCACCCTCCTCTTGGGTTCAAGCCAGCGAGGTAGAT...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGATTGCTCACCAACTCTaGCTGCTTCTATTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQIAHQL*LLLFLP
Trigger: AGGAAGAAATAGAAGCAGCAAGAGTTGGTGAGCAAT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGACCAATCTCCAGACTTaGTCTTCAGACATACAGAAC +
Preference number: 5 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQTNLQT*SSDIQN
Trigger: GTTCTGTATGTCTGAAGACAAAGTCTGGAGATTGGT...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCTCCCCACCAAGCAGTaGAGGGAAAAGGGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPLPTKQ*REKGQR
Trigger: CCTCTGACCCTTTTCCCTCAACTGCTTGGTGGGGAG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGTTGATTGGCTGGGTCTaGGAGCCAGGCACCCACCAC +
Preference number: 5 (lower is better)
Translates to: FKRMARPWEQPIDTELDQLIGWV*EPGTHH
Trigger: GTGGTGGGTGCCTGGCTCCAAGACCCAGCCAATCAA...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTTTGCTTCCTACAGACTaGAACCATGCCCTAAGGATT +
Preference number: 5 (lower is better)
Translates to: CACWSCFVSTSSTATSRSLLPTD*NHALRI
Trigger: AATCCTTAGGGCATGGTTCAAGTCTGTAGGAAGCAA...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTCAGCCTGGCTTGCGTTaGCCCAAAAGTAATAGTAAA +
Preference number: 5 (lower is better)
Translates to: CACWSCFVSTSSTATSRSQPGLR*PKSNSK
Trigger: TTTACTATTACTTTTGGGCAAACGCAAGCCAGGCTG...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTGCCTGCTGGTCCTGCTTTGTTTCCACATCATCTACCGCGACCAGCCGAAGTGGGCTGCCAAGAGGGTaGGGTGTTTACATTTATTTT +
Preference number: 5 (lower is better)
Translates to: CACWSCFVSTSSTATSRSGLPRG*GVYIYF
Trigger: AAAATAAATGTAAACACCCAACCCTCTTGGCAGCCC...ACTTCGGCTGGTCGCGGTAGATGATGTGGAAACAAAGCAGGACCAGCAGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGACCAATCTCCAGACTTaGTCTTCAGACATACAGAAC +
Preference number: 5 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWTNLQT*SSDIQN
Trigger: GTTCTGTATGTCTGAAGACAAAGTCTGGAGATTGGT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GCTACTCCAGAGGCTGAGGGGAAGACTTGCTCAAGCCCAGGAGTTCAGGTCCAGCCCCCAAAGATATGTTaGCCTAAAATCTCAGAATGT +
Preference number: 5 (lower is better)
Translates to: ATPEAEGKTCSSPGVQVQPPKIC*PKISEC
Trigger: ACATTCTGAGATTTTAGGCAAACATATCTTTGGGGG...CTGGACCTGAACTCCTGGGCTTGAGCAAGTCTTCCCCTCAGCCTCTGGAGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGGTCACGACCACAGAAGCGATATGAAACAGGTCCCGGGACACAGGGAGGGGAGGATACCCATGACCTaGAGTATTTCTCATTTCTAT +
Preference number: 5 (lower is better)
Translates to: WGHDHRSDMKQVPGHREGRIPMT*SISHFY
Trigger: ATAGAAATGAGAAATACTCAAGGTCATGGGTATCCT...CCCCTCCCTGTGTCCCGGGACCTGTTTCATATCGCTTCTGTGGTCGTGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTCTGCCACGGCGTGGTaGGCCAGACTCTGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSSATAW*ARLCQA
Trigger: GGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAGA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTTGGGGTTTCACCATGTaGGCCAGGCAGGTTTTGAAC +
Preference number: 5 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGWGFTM*ARQVLN
Trigger: GTTCAAAACCTGCCTGGCCAACATGGTGAAACCCCA...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTTGGGGTTTCACCATGTaGGCCATGCTGATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGWGFTM*AMLISN
Trigger: GTTCGAGATCAGCATGGCCAACATGGTGAAACCCCA...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTATGGGGTTTCACCATGTaGGCCATGCTGATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: VKLFPTEMVSHSSISACVWGFTM*AMLISN
Trigger: GTTCGAGATCAGCATGGCCAACATGGTGAAACCCCA...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCTTGGTGAGTGGGCCTaGGACTGTACTTCACAATCC +
Preference number: 5 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPLGEWA*DCTSQS
Trigger: GGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAATGAAACTACCAGCTaGTATTTATACCTACCCAGG +
Preference number: 5 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWNETTS*YLYLPR
Trigger: CCTGGGTAGGTATAAATACAAGCTGGTAGTTTCATT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTTGCCTTGCTTCCCCTTaGCCTTCCACTATGACTGCT +
Preference number: 5 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGCLASP*PSTMTA
Trigger: AGCAGTCATAGTGGAAGGCAAAGGGGAAGCAAGGCA...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCCCAAGATCAGGAGTTaGAGACCAGTCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPPKIRS*RPVWPT
Trigger: TGTTGGCCAGACTGGTCTCAAACTCCTGATCTTGGG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGCAGACGACGGCACAGGGAGGTGCCCTACTCGCGGTTCATGTCATCACTTTCGGTAAATGAGGTACACTaGAGGTATTTTGCAAGTATC +
Preference number: 5 (lower is better)
Translates to: SRRRHREVPYSRFMSSLSVNEVH*RYFASI
Trigger: GATACTTGCAAAATACCTCAAGTGTACCTCATTTAC...CGAAAGTGATGACATGAACCGCGAGTAGGGCACCTCCCTGTGCCGTCGTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACCAGCCAAAGGACAGTaGGAGGAATCGAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: VKLFPTEMVSHSSISACVPAKGQ*EESSFM
Trigger: CATGAAGCTCGATTCCTCCAACTGTCCTTTGGCTGG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCCAGGAGAGGACTTCTaGCCACCGATCCATTTCTGC +
Preference number: 5 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQPGEDF*PPIHFC
Trigger: GCAGAAATGGATCGGTGGCAAGAAGTCCTCTCCTGG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGTTGGCCAGGCAGGTTTaGAACTCCTGGCCACAAGTG +
Preference number: 5 (lower is better)
Translates to: FKRMARPWEQPIDTELDQLARQV*NSWPQV
Trigger: CACTTGTGGCCAGGAGTTCAAAACCTGCCTGGCCAA...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAACGCAATTACCCCTCTaGGATGCATCTGCAACAAGC +
Preference number: 5 (lower is better)
Translates to: VKLFPTEMVSHSSISACVTQLPL*DASATS
Trigger: GCTTGTTGCAGATGCATCCAAGAGGGGTAATTGCGT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTACGCAATTACCCCTCTaGGATGCATCTGCAACAAGC +
Preference number: 5 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPTQLPL*DASATS
Trigger: GCTTGTTGCAGATGCATCCAAGAGGGGTAATTGCGT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGGGAGGCTGAGGAGGGCAGATCACCCAAGATCAGGAGTTTGAGACCAGTCTGGAGACAAGAAAAATACTaGCTGTTTTATCAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: WEAEEGRSPKIRSLRPVWRQEKY*LFYQEA
Trigger: GGCCTCTTGATAAAACAGCAAGTATTTTTCTTGTCT...CCAGACTGGTCTCAAACTCCTGATCTTGGGTGATCTGCCCTCCTCAGCCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCTGGTGCGGGTCTTATaGCTCACCAACTCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: FKRMARPWEQPIDTELDQLVRVL*LTNSCC
Trigger: GCAGCAAGAGTTGGTGAGCAATAAGACCCGCACCAG...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCCTAGGAAGTGGATGTaGCAGTGTGTCGAGATCATG +
Preference number: 5 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPPRKWM*QCVEIM
Trigger: CATGATCTCGACACACTGCAACATCCACTTCCTAGG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTATTCCACTATGACTGCTaGTTTCCTGAGGCCTCACAG +
Preference number: 5 (lower is better)
Translates to: VKLFPTEMVSHSSISACVFHYDC*FPEASQ
Trigger: CTGTGAGGCCTCAGGAAACAAGCAGTCATAGTGGAA...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTCATGTAAGATGTGCCTaGCTTCCCCTTTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGHVRCA*LPLCLP
Trigger: TGGAAGGCAAAGGGGAAGCAAGGCACATCTTACATG...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTTGGCCAGGCTGGTCTaGGCCTCCCGAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLARLV*ASRSAG
Trigger: CCCAGCACTTCGGGAGGCCAAGACCAGCCTGGCCAA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGTCAGAGGCAGAGGCTTaGGCTGACTTCTGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQSEAEA*ADFWPS
Trigger: TGAAGGCCAGAAGTCAGCCAAAGCCTCTGCCTCTGA...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTCGGCATTCATTCCTGTaGTATGGGGTACCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPRHSFL*YGVPVS
Trigger: ACTCACTGGTACCCCATACAACAGGAATGAATGCCG...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACCAGCAAATCCACTGTaGATACGCAATTACCCCTCT +
Preference number: 5 (lower is better)
Translates to: VKLFPTEMVSHSSISACVPANPL*IRNYPS
Trigger: AGAGGGGTAATTGCGTATCAACAGTGGATTTGCTGG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCCCAACCCCACATATTaGGATCCAGCCCTTGGTGAG +
Preference number: 5 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVPNPTY*DPALGE
Trigger: CTCACCAAGGGCTGGATCCAAATATGTGGGGTTGGG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACCCTAGGAAGTGGATGTaGCAGTGTGTCGAGATCATG +
Preference number: 5 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENPRKWM*QCVEIM
Trigger: CATGATCTCGACACACTGCAACATCCACTTCCTAGG...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACCGGCATTCATTCCTGTaGTATGGGGTACCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENRHSFL*YGVPVS
Trigger: ACTCACTGGTACCCCATACAACAGGAATGAATGCCG...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTGGCCACATTCTTTTCTaGATCCTGGGCATTAGGGAA +
Preference number: 5 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPGHILF*ILGIRE
Trigger: TTCCCTAATGCCCAGGATCAAGAAAAGAATGTGGCC...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTTGATTGGCTGGGTCTaGGAGCCAGGCACCCACCAC +
Preference number: 5 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLIGWV*EPGTHH
Trigger: GTGGTGGGTGCCTGGCTCCAAGACCCAGCCAATCAA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACAGCACCTTCTCTATTTaGGGCATCAACACCAAGGAC +
Preference number: 5 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENSTFSI*GINTKD
Trigger: GTCCTTGGTGTTGATGCCCAAAATAGAGAAGGTGCT...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGCACTATCTGTCCTGCTaGCACCCACCTCCACCCAGG +
Preference number: 5 (lower is better)
Translates to: KRKKSLLSETVSGGINRLHYLSC*HPPPPR
Trigger: CCTGGGTGGAGGTGGGTGCAAGCAGGACAGATAGTG...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCATCTTCACCTGCAGTaGTCCGGCCAACATGGCCCC +
Preference number: 5 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNHLHLQ*SGQHGP
Trigger: GGGGCCATGTTGGCCGGACAACTGCAGGTGAAGATG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCCTGTCCGTCCCACCTaGGATAGTACAAAAGTGACA +
Preference number: 5 (lower is better)
Translates to: FKRMARPWEQPIDTELDQPVRPT*DSTKVT
Trigger: TGTCACTTTTGTACTATCCAAGGTGGGACGGACAGG...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTTCAAGAAGTCTTCTGTaGATCCTGATACAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPSRSLL*ILIQSH
Trigger: GTGGGACTGTATCAGGATCAACAGAAGACTTCTTGA...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGATCTCTCAGGTGCTTTaGAATCAGACTGCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQISQVL*NQTAVG
Trigger: CCCCACAGCAGTCTGATTCAAAAGCACCTGAGAGAT...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTGAGAGGCTGCAGCTATaGAGGATAGAACAATACATC +
Preference number: 5 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGERLQL*RIEQYI
Trigger: GATGTATTGTTCTATCCTCAATAGCTGCAGCCTCTC...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ATTGGAAGTAGGTCACAGAATCCCAACCCCACATATTTGGATCCAGCCCTTGGTTGTTCTACTCAGCCCTaGGTGATTTCACAGCACTTT +
Preference number: 5 (lower is better)
Translates to: IGSRSQNPNPTYLDPALGCSTQP*VISQHF
Trigger: AAAGTGCTGTGAAATCACCAAGGGCTGAGTAGAACA...ACCAAGGGCTGGATCCAAATATGTGGGGTTGGGATTCTGTGACCTACTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGTGGACCACCTGAGGTaGGGAGTTCGAGACCAGCCA +
Preference number: 5 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSVDHLR*GVRDQP
Trigger: TGGCTGGTCTCGAACTCCCAACCTCAGGTGGTCCAC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACATATTCTGGAAGGTTTaGATTGGCTGGGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENIFWKV*IGWVLE
Trigger: CTCCAAGACCCAGCCAATCAAAACCTTCCAGAATAT...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGCCAGCAAATCCACTGTaGATACGCAATTACCCCTCT +
Preference number: 5 (lower is better)
Translates to: FKRMARPWEQPIDTELDQPANPL*IRNYPS
Trigger: AGAGGGGTAATTGCGTATCAACAGTGGATTTGCTGG...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTGGGGTCCCACTAGGTaGCCCAGGCTAGCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: KRKKSLLSETVSGGINRLWGPTR*PRLALN
Trigger: GTTCAAAGCTAGCCTGGGCAACCTAGTGGGACCCCA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTGGGGTCCCACTAGGTaGCCCAGGCTAGCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNWGPTR*PRLALN
Trigger: GTTCAAAGCTAGCCTGGGCAACCTAGTGGGACCCCA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGGGCCCTCTACCGCATTaGGAAAATAAGCCTGTAACA +
Preference number: 5 (lower is better)
Translates to: FKRMARPWEQPIDTELDQGPLPH*ENKPVT
Trigger: TGTTACAGGCTTATTTTCCAAATGCGGTAGAGGGCC...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACACAGGAAAGATTATTaGAAGGTCAAAGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: VKLFPTEMVSHSSISACVHRKDY*KVKAGE
Trigger: CTCACCTGCTTTGACCTTCAAATAATCTTTCCTGTG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTATAATCCCAGCACTTaGGGAGGTCAAGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVYNPST*GGQDGR
Trigger: CCTCCCATCTTGACCTCCCAAAGTGCTGGGATTATA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCTCCCCACCAAGCAGTaGAGGGAAAAGGGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMLPTKQ*REKGQR
Trigger: CCTCTGACCCTTTTCCCTCAACTGCTTGGTGGGGAG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACATGGAGGTCATGATGTaGAGGGAGGCTGGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNMEVMM*REAGSP
Trigger: TGGGCTCCCAGCCTCCCTCAACATCATGACCTCCAT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCCAGGAGAGGACTTCTaGCCACCGATCCATTTCTGC +
Preference number: 5 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMPGEDF*PPIHFC
Trigger: GCAGAAATGGATCGGTGGCAAGAAGTCCTCTCCTGG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGCCAGGAGACTCTTTTaGAAGGGCAGAGAAAAGAAG +
Preference number: 5 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVARRLF*KGREKK
Trigger: CTTCTTTTCTCTGCCCTTCAAAAAGAGTCTCCTGGC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTTGGCCAGGCAGGTTTaGAACTCCTGGCCACAAGTG +
Preference number: 5 (lower is better)
Translates to: KRKKSLLSETVSGGINRLLARQV*NSWPQV
Trigger: CACTTGTGGCCAGGAGTTCAAAACCTGCCTGGCCAA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACACGAGCAGAAAAATTaGGGCATTACACAAACAACA +
Preference number: 5 (lower is better)
Translates to: VKLFPTEMVSHSSISACVHEQKN*GITQTT
Trigger: TGTTGTTTGTGTAATGCCCAAATTTTTCTGCTCGTG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTAAAACTCATAAGATGCTaGTGGCTGGTGAGAAAACAA +
Preference number: 5 (lower is better)
Translates to: VKLFPTEMVSHSSISACVKLIRC*WLVRKQ
Trigger: TTGTTTTCTCACCAGCCACAAGCATCTTATGAGTTT...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGTTGCTTCCTACAGACTaGAACCATGCCCTAAGGATT +
Preference number: 5 (lower is better)
Translates to: FKRMARPWEQPIDTELDQLLPTD*NHALRI
Trigger: AATCCTTAGGGCATGGTTCAAGTCTGTAGGAAGCAA...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCCGTGGGTGGGTTGCTaGACTAGGCCAGAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMPWVGC*TRPESK
Trigger: TTTACTCTCTGGCCTAGTCAAGCAACCCACCCACGG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCGTGGGTGGGTTGCTaGACTAGGCCAGAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSPWVGC*TRPESK
Trigger: TTTACTCTCTGGCCTAGTCAAGCAACCCACCCACGG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGGCCCTCTACCGCATTaGGAAAATAAGCCTGTAACA +
Preference number: 5 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVGPLPH*ENKPVT
Trigger: TGTTACAGGCTTATTTTCCAAATGCGGTAGAGGGCC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACCTGGTGCGGGTCTTATaGCTCACCAACTCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNLVRVL*LTNSCC
Trigger: GCAGCAAGAGTTGGTGAGCAATAAGACCCGCACCAG...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CATTCCAGGTGCTATGGGGGAGATAAGAACAGAAATCCTGGTACCTGTATGCCTAATGAAACTACCAGCTaGTATTTATACCTACCCAGG +
Preference number: 5 (lower is better)
Translates to: HSRCYGGDKNRNPGTCMPNETTS*YLYLPR
Trigger: CCTGGGTAGGTATAAATACAAGCTGGTAGTTTCATT...AGGCATACAGGTACCAGGATTTCTGTTCTTATCTCCCCCATAGCACCTGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACCACAGGAAAGATTATTaGAAGGTCAAAGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENHRKDY*KVKAGE
Trigger: CTCACCTGCTTTGACCTTCAAATAATCTTTCCTGTG...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTCAGAGGCAGAGGCTTaGGCTGACTTCTGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNSEAEA*ADFWPS
Trigger: TGAAGGCCAGAAGTCAGCCAAAGCCTCTGCCTCTGA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGTATCATGAGTCCTCTTaGTCCCAGCAGCTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVYHESS*SQQLWH
Trigger: ATGCCAAAGCTGCTGGGACAAAGAGGACTCATGATA...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGCACAATAGCAAAAAGTaGGTGGTGGTGCATGTGGGT +
Preference number: 5 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVHNSKK*VVVHVG
Trigger: ACCCACATGCACCACCACCAACTTTTTGCTATTGTG...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACTCGCAGCCATGCTGGTaGCACACTGCCATTTTCTAC +
Preference number: 5 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNSQPCW*HTAIFY
Trigger: GTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCGA...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGTCGCAGCCATGCTGGTaGCACACTGCCATTTTCTAC +
Preference number: 5 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMSQPCW*HTAIFY
Trigger: GTAGAAAATGGCAGTGTGCAACCAGCATGGCTGCGA...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCTTGGTGAGTGGGCCTaGGACTGTACTTCACAATCC +
Preference number: 5 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSLGEWA*DCTSQS
Trigger: GGATTGTGAAGTACAGTCCAAGGCCCACTCACCAAG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTGCCTTGCTTCCCCTTaGCCTTCCACTATGACTGCT +
Preference number: 5 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSCLASP*PSTMTA
Trigger: AGCAGTCATAGTGGAAGGCAAAGGGGAAGCAAGGCA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCCAAGATCAGGAGTTaGAGACCAGTCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSPKIRS*RPVWPT
Trigger: TGTTGGCCAGACTGGTCTCAAACTCCTGATCTTGGG...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCCAGCCAAAGGACAGTaGGAGGAATCGAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMPAKGQ*EESSFM
Trigger: CATGAAGCTCGATTCCTCCAACTGTCCTTTGGCTGG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp GTCAAACTCTTTCCTACCGAGATGGTGTCCCACTCATCTATCTCAGCATGCGTACATATGTATTTAACTTaGGTTAGCCCCAAGTACCTT +
Preference number: 5 (lower is better)
Translates to: VKLFPTEMVSHSSISACVHMYLT*VSPKYL
Trigger: AAGGTACTTGGGGCTAACCAAAGTTAAATACATATG...TACGCATGCTGAGATAGATGAGTGGGACACCATCTCGGTAGGAAAGAGTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp ACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCCCTTGGTGGTTTACACGTCAGATTaGCAGGATTCTTGCATCCCT +
Preference number: 5 (lower is better)
Translates to: TQKENNYYRLNCSTQPLVVYTSD*QDSCIP
Trigger: AGGGATGCAAGAATCCTGCAAATCTGACGTGTAAAC...CACCAAGGGCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCACGAGCAGAAAAATTaGGGCATTACACAAACAACA +
Preference number: 5 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQHEQKN*GITQTT
Trigger: TGTTGTTTGTGTAATGCCCAAATTTTTCTGCTCGTG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCTTCCACTATGACTGCTaGTTTCCTGAGGCCTCACAG +
Preference number: 5 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSFHYDC*FPEASQ
Trigger: CTGTGAGGCCTCAGGAAACAAGCAGTCATAGTGGAA...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGCTGTAAGGCTCACTTGGTTTTCAGTAGTCAACCCGGTGGTTCTGAAAACGTAAATGAGGTACACTaGAGGTATTTTGCAAGTATC +
Preference number: 5 (lower is better)
Translates to: KSCKAHLVFSSQPGGSENVNEVH*RYFASI
Trigger: GATACTTGCAAAATACCTCAAGTGTACCTCATTTAC...GTTTTCAGAACCACCGGGTTGACTACTGAAAACCAAGTGAGCCTTACAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCGGCAGAAAGAATTCTTaGAGTAAGCCTGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSGRKNS*SKPGRW
Trigger: CCACCTTCCAGGCTTACTCAAAGAATTCTTTCTGCC...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGGCAGAAAGAATTCTTaGAGTAAGCCTGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNGRKNS*SKPGRW
Trigger: CCACCTTCCAGGCTTACTCAAAGAATTCTTTCTGCC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TTCAAGCGCATGGCAAGACCATGGGAACAGCCTATTGATACAGAATTAGATCAGAGACAAGAAAAATACTaGCTGTTTTATCAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: FKRMARPWEQPIDTELDQRQEKY*LFYQEA
Trigger: GGCCTCTTGATAAAACAGCAAGTATTTTTCTTGTCT...CTGATCTAATTCTGTATCAATAGGCTGTTCCCATGGTCTTGCCATGCGCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACGGCCACATTCTTTTCTaGATCCTGGGCATTAGGGAA +
Preference number: 5 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNGHILF*ILGIRE
Trigger: TTCCCTAATGCCCAGGATCAAGAAAAGAATGTGGCC...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGTTCACAATTACAAGACCATGGGGTCACGACCACAGAAGCGATATGAAACAGCATATGTATTTAACTTaGGTTAGCCCCAAGTACCTT +
Preference number: 5 (lower is better)
Translates to: KFTITRPWGHDHRSDMKQHMYLT*VSPKYL
Trigger: AAGGTACTTGGGGCTAACCAAAGTTAAATACATATG...CTGTTTCATATCGCTTCTGTGGTCGTGACCCCATGGTCTTGTAATTGTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp TGTTGTTTTAAGCCATACATTTGTGGCAATTTGTTAACAGCAGTCCTAGGAAACAGATTTGCAGGATTCTaGCATCCCTGGAATACCTGG +
Preference number: 5 (lower is better)
Translates to: CCFKPYICGNLLTAVLGNRFAGF*HPWNTW
Trigger: CCAGGTATTCCAGGGATGCAAGAATCCTGCAAATCT...GTTTCCTAGGACTGCTGTTAACAAATTGCCACAAATGTATGGCTTAAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGATATTCTGGAAGGTTTaGATTGGCTGGGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMIFWKV*IGWVLE
Trigger: CTCCAAGACCCAGCCAATCAAAACCTTCCAGAATAT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGCAGCCTGGCTTGCGTTaGCCCAAAAGTAATAGTAAA +
Preference number: 5 (lower is better)
Translates to: KRKKSLLSETVSGGINRLQPGLR*PKSNSK
Trigger: TTTACTATTACTTTTGGGCAAACGCAAGCCAGGCTG...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGGGGCTGCCAAGAGGGTaGGGTGTTTACATTTATTTT +
Preference number: 5 (lower is better)
Translates to: KRKKSLLSETVSGGINRLGLPRG*GVYIYF
Trigger: AAAATAAATGTAAACACCCAACCCTCTTGGCAGCCC...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCAGCAAATTACTCCATaGGGGTTAGGCCTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMQQITP*GLGLVS
Trigger: AGAAACAAGGCCTAACCCCAATGGAGTAATTTGCTG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGTCAAGAAGTCTTCTGTaGATCCTGATACAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: KRKKSLLSETVSGGINRLSRSLL*ILIQSH
Trigger: GTGGGACTGTATCAGGATCAACAGAAGACTTCTTGA...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AGAGAAAAACCCAGAAAGAAAACAACTACTATCGTCTTAACTGTTCTACTCAGCAAAATTCAGAGCCATTaGCAAAGCCTAGTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: REKPRKKTTTIVLTVLLSKIQSH*QSLVPR
Trigger: CCTAGGAACTAGGCTTTGCAAATGGCTCTGAATTTT...GCTGAGTAGAACAGTTAAGACGATAGTAGTTGTTTTCTTTCTGGGTTTTTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGAAAATTCAGAGCCATTaGCAAAGCCTAGTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMKIQSH*QSLVPR
Trigger: CCTAGGAACTAGGCTTTGCAAATGGCTCTGAATTTT...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp CTTTTCAGTGTTTTACATGGATTAGCACCAGTTAATCCTCACAACAAACCTATGCCCCCAAAGATATGTTaGCCTAAAATCTCAGAATGT +
Preference number: 5 (lower is better)
Translates to: LFSVLHGLAPVNPHNKPMPPKIC*PKISEC
Trigger: ACATTCTGAGATTTTAGGCAAACATATCTTTGGGGG...CATAGGTTTGTTGTGAGGATTAACTGGTGCTAATCCATGTAAAACACTGAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS-3UTR CAA 90 bp AAGAGAAAGAAAAGTTTACTATCAGAGACTGTATCTGGAGGGATAAACAGACTGAGGATACCCATGACCTaGAGTATTTCTCATTTCTAT +
Preference number: 5 (lower is better)
Translates to: KRKKSLLSETVSGGINRLRIPMT*SISHFY
Trigger: ATAGAAATGAGAAATACTCAAGGTCATGGGTATCCT...CAGTCTGTTTATCCCTCCAGATACAGTCTCTGATAGTAAACTTTTCTTTCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS GCA 72 bp GCGGGTTCCTCTGCCACGGCGTGGTTGGCCAGACTCTaGCAGGCCCGCTCGCAGGTCTCCAGCGCCGCCCGG +
Preference number: 6 (lower is better)
Translates to: AGSSATAWLARL*QARSQVSSAAR
Trigger: CCGGGCGGCGCTGGAGACCTGCGAGCGGGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAGAGGAACCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CAA 90 bp TTCACCTCCAATGAGGTGCCCGCGGGTTCCTCTGCCACGGCGTGGTaGGCCAGACTCTGCCAGGCCCGCTCGCAGGTCTCCAGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: FTSNEVPAGSSATAW*ARLCQARSQVSSAA
Trigger: GGCGGCGCTGGAGACCTGCGAGCGGGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAGAGGAACCCGCGGGCACCTCATTGGAGGTGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CCA 72 bp ATGAGGTGCCCGCGGGTTCCTCTGCCACGGCGTGGTTaGCCAGACTCTGCCAGGCCCGCTCGCAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: MRCPRVPLPRRG*PDSARPARRSP
Trigger: TGGAGACCTGCGAGCGGGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAGAGGAACCCGCGGGCACCTCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CCA 72 bp TCCAATGAGGTGCCCGCGGGTTCCTCTGCCACGGCGTaGTTGGCCAGACTCTGCCAGGCCCGCTCGCAGGTC +
Preference number: 6 (lower is better)
Translates to: SNEVPAGSSATA*LARLCQARSQV
Trigger: GACCTGCGAGCGGGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAGAGGAACCCGCGGGCACCTCATTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CAA 72 bp AATGAGGTGCCCGCGGGTTCCTCTGCCACGGCGTGGTaGGCCAGACTCTGCCAGGCCCGCTCGCAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: NEVPAGSSATAW*ARLCQARSQVS
Trigger: GGAGACCTGCGAGCGGGCCTGGCAGAGTCTGGCCAACCACGCCGTGGCAGAGGAACCCGCGGGCACCTCATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS TCA 72 bp GTCCGGGTCCAAGGCCCAGGTCCTCAGACGTCGGAGTaGCCGCCTCCCCAGAGGCTCCGGGATATCCCGAGT +
Preference number: 6 (lower is better)
Translates to: VRVQGPGPQTSE*PPPQRLRDIPS
Trigger: ACTCGGGATATCCCGGAGCCTCTGGGGAGGCGGTCACTCCGACGTCTGAGGACCTGGGCCTTGGACCCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS CCA 72 bp GCGACACGTGCAGGAACTGCCTCAGCTCCGGGCTCCTaGTTACGATCAAAGACTCACCTCGCCTCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: ATRAGTASAPGS*LRSKTHLASRQ
Trigger: CTGCCGGGAGGCGAGGTGAGTCTTTGATCGTAACCAGGAGCCCGGAGCTGAGGCAGTTCCTGCACGTGTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS CCA 72 bp GCCTCCCCAGAGGCTCCGGGATATCCCGAGTTGGCCTaGGCGAAGAGGGAGAGTCCTCATCTCTTTGCCCAC +
Preference number: 6 (lower is better)
Translates to: ASPEAPGYPELA*AKRESPHLFAH
Trigger: GTGGGCAAAGAGATGAGGACTCTCCCTCTTCGCCCAGGCCAACTCGGGATATCCCGGAGCCTCTGGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS GCA 72 bp TCAGTCACGGATGCGGAGCTGGTAGAGGCGAGAAAATaGAGCCTTCCGGATCCAGCGGAAGAGCTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SVTDAELVEARK*SLPDPAEELGQ
Trigger: CTGGCCCAGCTCTTCCGCTGGATCCGGAAGGCTGCATTTTCTCGCCTCTACCAGCTCCGCATCCGTGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS GCA 72 bp GACCCAGGAGAGGACTTCTTGCCACCGATCCATTTCTaGCAGGGCCTGGATCCCCACAACACACAGGGAGCA +
Preference number: 6 (lower is better)
Translates to: DPGEDFLPPIHF*QGLDPHNTQGA
Trigger: TGCTCCCTGTGTGTTGTGGGGATCCAGGCCCTGGCAGAAATGGATCGGTGGCAAGAAGTCCTCTCCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CCA 72 bp AGGACTTCTTGCCACCGATCCATTTCTGCCAGGGCCTaGATCCCCACAACACACAGGGAGCACTTCACCTCC +
Preference number: 6 (lower is better)
Translates to: RTSCHRSISARA*IPTTHREHFTS
Trigger: GGAGGTGAAGTGCTCCCTGTGTGTTGTGGGGATCCAGGCCCTGGCAGAAATGGATCGGTGGCAAGAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CAA 90 bp AGCTGGGCTCGCCTGGAGGCTGGGGAAGCAGTTTACACGTCAGATTaGCAGGATTCTTGCATCCCTGGAATACCTGGCCCTAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SWARLEAGEAVYTSD*QDSCIPGIPGPSFS
Trigger: GGAGAAGCTAGGGCCAGGTATTCCAGGGATGCAAGAATCCTGCAAATCTGACGTGTAAACTGCTTCCCCAGCCTCCAGGCGAGCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS CAA 72 bp GGCTCCATATTCTGGAAGGTTTTGATTGGCTGGGTCTaGGAGCCAGGCACCCACCACATCCAGCACAGCTCC +
Preference number: 6 (lower is better)
Translates to: GSIFWKVLIGWV*EPGTHHIQHSS
Trigger: GGAGCTGTGCTGGATGTGGTGGGTGCCTGGCTCCAAGACCCAGCCAATCAAAACCTTCCAGAATATGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CAA 90 bp TTCTGCCAAGGCTCCATATTCTGGAAGGTTTTGATTGGCTGGGTCTaGGAGCCAGGCACCCACCACATCCAGCACAGCTCCAGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: FCQGSIFWKVLIGWV*EPGTHHIQHSSRLL
Trigger: CAAGAGCCTGGAGCTGTGCTGGATGTGGTGGGTGCCTGGCTCCAAGACCCAGCCAATCAAAACCTTCCAGAATATGGAGCCTTGGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CCA 72 bp GCCTATCTGAGGCAAAAGCTGGGCTCGCCTGGAGGCTaGGGAAGCAGTTTACACGTCAGATTTGCAGGATTC +
Preference number: 6 (lower is better)
Translates to: AYLRQKLGSPGG*GSSLHVRFAGF
Trigger: GAATCCTGCAAATCTGACGTGTAAACTGCTTCCCCAGCCTCCAGGCGAGCCCAGCTTTTGCCTCAGATAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS CAA 72 bp CGCCTGGAGGCTGGGGAAGCAGTTTACACGTCAGATTaGCAGGATTCTTGCATCCCTGGAATACCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: RLEAGEAVYTSD*QDSCIPGIPGP
Trigger: AGGGCCAGGTATTCCAGGGATGCAAGAATCCTGCAAATCTGACGTGTAAACTGCTTCCCCAGCCTCCAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS CAA 90 bp CTTTTCAGGGACCTGGTAATACTGAAGGACCCAGGAGAGGACTTCTaGCCACCGATCCATTTCTGCCAGGGCCTGGATCCCCACAACACA +
Preference number: 6 (lower is better)
Translates to: LFRDLVILKDPGEDF*PPIHFCQGLDPHNT
Trigger: TGTGTTGTGGGGATCCAGGCCCTGGCAGAAATGGATCGGTGGCAAGAAGTCCTCTCCTGGGTCCTTCAGTATTACCAGGTCCCTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS GCA 72 bp GGGGAAGCAGTTTACACGTCAGATTTGCAGGATTCTTaGATCCCTGGAATACCTGGCCCTAGCTTCTCCGGC +
Preference number: 6 (lower is better)
Translates to: GEAVYTSDLQDS*IPGIPGPSFSG
Trigger: GCCGGAGAAGCTAGGGCCAGGTATTCCAGGGATGCAAGAATCCTGCAAATCTGACGTGTAAACTGCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399744.8
CDS CCA 72 bp CCGCTGCACGTGAAATTCTGCCAAGGCTCCATATTCTaGAAGGTTTTGATTGGCTGGGTCTTGGAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: PLHVKFCQGSIF*KVLIGWVLEPG
Trigger: GCCTGGCTCCAAGACCCAGCCAATCAAAACCTTCCAGAATATGGAGCCTTGGCAGAATTTCACGTGCAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS GCA 72 bp CAGGCACCCACCACATCCAGCACAGCTCCAGGCTCTTaGATTTTGCTGTATAAAAGAATGCACAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: QAPTTSSTAPGS*ILLYKRMHSSR
Trigger: CCTGGAGCTGTGCATTCTTTTATACAGCAAAATGCAAGAGCCTGGAGCTGTGCTGGATGTGGTGGGTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2
CDS CCA 72 bp AGAGAAAAGAAGTGGCTCACCGCAGAGTCCCAAAGCTaGCGAACCAACATCGGTAGTGACAGGAACTTGTGG +
Preference number: 6 (lower is better)
Translates to: REKKWLTAESQS*RTNIGSDRNLW
Trigger: CCACAAGTTCCTGTCACTACCGATGTTGGTTCGCCAGCTTTGGGACTCTGCGGTGAGCCACTTCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329627.11
ENST00000399744.8
CDS CAA 72 bp GTGAAATTCTGCCAAGGCTCCATATTCTGGAAGGTTTaGATTGGCTGGGTCTTGGAGCCAGGCACCCACCAC +
Preference number: 6 (lower is better)
Translates to: VKFCQGSIFWKV*IGWVLEPGTHH
Trigger: GTGGTGGGTGCCTGGCTCCAAGACCCAGCCAATCAAAACCTTCCAGAATATGGAGCCTTGGCAGAATTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329627.11
ENST00000399744.8
ENST00000428061.2