RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PEX19 (Homo sapiens)

Ensembl gene IDs: ENSG00000162735

Ensembl transcript IDs: ENST00000368072.10, ENST00000392220.2, ENST00000462644.5, ENST00000467711.5, ENST00000472750.5, ENST00000495624.1, ENST00000524939.1, ENST00000532508.5, ENST00000532516.1, ENST00000532643.5, ENST00000533104.1, ENST00000533699.5

Found 510 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGTCATATCACTGCCCACTCTCCCTGCAGCCTCTGAGAGCTTTTaGAACTGCTCCACCAGGTGGGGTTCTTCCTCAGCCAACTCCTTC +
Preference number: 1 (lower is better)
Translates to: EVISLPTLPAASESF*NCSTRWGSSSANSF
Trigger: GAAGGAGTTGGCTGAGGAAGAACCCCACCTGGTGGAGCAGTTCCAAAAGCTCTCAGAGGCTGCAGGGAGAGTGGGCAGTGATATGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR GCA 90 bp ATATCACTGCCCACTCTCCCTGCAGCCTCTGAGAGCTTTTGGAACTaGTCCACCAGGTGGGGTTCTTCCTCAGCCAACTCCTTCATTGCC +
Preference number: 1 (lower is better)
Translates to: ISLPTLPAASESFWN*STRWGSSSANSFIA
Trigger: GGCAATGAAGGAGTTGGCTGAGGAAGAACCCCACCTGGTGGAGCAGTTCCAAAAGCTCTCAGAGGCTGCAGGGAGAGTGGGCAGTGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR CCA 90 bp ACTCTCCCTGCAGCCTCTGAGAGCTTTTGGAACTGCTCCACCAGGTaGGGTTCTTCCTCAGCCAACTCCTTCATTGCCTTCTCGAACTCC +
Preference number: 1 (lower is better)
Translates to: TLPAASESFWNCSTR*GSSSANSFIAFSNS
Trigger: GGAGTTCGAGAAGGCAATGAAGGAGTTGGCTGAGGAAGAACCCCACCTGGTGGAGCAGTTCCAAAAGCTCTCAGAGGCTGCAGGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR CCA 90 bp TGTTGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTaGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: CCVSHDQTLFTTGTW*ARKIEGIQVKVEAR
Trigger: CCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
3UTR CCA 90 bp ACGTGTTGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTaGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCC +
Preference number: 1 (lower is better)
Translates to: TCCVSHDQTLFTTGT*WARKIEGIQVKVEA
Trigger: GGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAACACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
3UTR TCA 90 bp TCACCCATATCACACAGCATTGTAGGAAGAAGCAGGGTAACCATTTaGGTTCTCAGCCTGGAACAGGGAGGTGAGGGCTCAGCACCTAGA +
Preference number: 1 (lower is better)
Translates to: SPISHSIVGRSRVTI*VLSLEQGGEGSAPR
Trigger: TCTAGGTGCTGAGCCCTCACCTCCCTGTTCCAGGCTGAGAACTCAAATGGTTACCCTGCTTCTTCCTACAATGCTGTGTGATATGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR GCA 90 bp GAACATGAGGAAAGATGGCCATCCAGTCTCCTTTGCCAACTGAGGTaGAGACTGAGTTGTGGAAGGTGGGTGTTGATGGAACCCAGCATT +
Preference number: 1 (lower is better)
Translates to: EHEERWPSSLLCQLR*RLSCGRWVLMEPSI
Trigger: AATGCTGGGTTCCATCAACACCCACCTTCCACAACTCAGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGGCCATCTTTCCTCATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR GCA 90 bp TCAGTTCTGCTAGGGTCTTCAGAGAGACCGAGGGCCCCAAAACAGTaGTACTCAAAGATGATCTGCAGACTTGTGCTGGTCAGTGAACAC +
Preference number: 1 (lower is better)
Translates to: SVLLGSSERPRAPKQ*YSKMICRLVLVSEH
Trigger: GTGTTCACTGACCAGCACAAGTCTGCAGATCATCTTTGAGTAGCACTGTTTTGGGGCCCTCGGTCTCTCTGAAGACCCTAGCAGAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CCA 90 bp GTGAAACAGACCCTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTaGTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAG +
Preference number: 1 (lower is better)
Translates to: VKQTLFLERQRKNLS*YGTILNGMTEGSGQ
Trigger: CTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAGGGTCTGTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR TCA 90 bp CTGCCAGGAAGACGGGGAGTCAGTGAGAATCGTAAATGGACTAGATaGGGGGAAATAGGATGGGCCCTTCTTTATCACAGCTTGAGCTCA +
Preference number: 1 (lower is better)
Translates to: LPGRRGVSENRKWTR*GEIGWALLYHSLSS
Trigger: TGAGCTCAAGCTGTGATAAAGAAGGGCCCATCCTATTTCCCCTCATCTAGTCCATTTACGATTCTCACTGACTCCCCGTCTTCCTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR TCA 90 bp CCAGTTTGGGTGCTGTCAAACTTGCCGGGTCGGCAGCACACAGTGTaGACTCCATACCTGTCATGGGCAATAGGAATGCATATTGATAAG +
Preference number: 1 (lower is better)
Translates to: PVWVLSNLPGRQHTV*TPYLSWAIGMHIDK
Trigger: CTTATCAATATGCATTCCTATTGCCCATGACAGGTATGGAGTTCACACTGTGTGCTGCCGACCCGGCAAGTTTGACAGCACCCAAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CCA 90 bp AGTGCATGCCCCAAAAGGGATGCCTTCCTTCACCTTGCAGGTAGCTaGAACTTTGATAGTGGCAGAAACCACAATGGAGTAGGGTTCACA +
Preference number: 1 (lower is better)
Translates to: SACPKRDAFLHLAGS*NFDSGRNHNGVGFT
Trigger: TGTGAACCCTACTCCATTGTGGTTTCTGCCACTATCAAAGTTCCAGCTACCTGCAAGGTGAAGGAAGGCATCCCTTTTGGGGCATGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CCA 90 bp CCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTaGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGACA +
Preference number: 1 (lower is better)
Translates to: PQVPMVLLTPDVPHS*DSERKTCCVSHDQT
Trigger: TGTCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
3UTR CCA 90 bp GAAGGGCTTTCTACATTGAAATACTCAAGGGAACATGAGGAAAGATaGCCATCCAGTCTCCTTTGCCAACTGAGGTGCAGACTGAGTTGT +
Preference number: 1 (lower is better)
Translates to: EGLSTLKYSREHEER*PSSLLCQLRCRLSC
Trigger: ACAACTCAGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGGCCATCTTTCCTCATGTTCCCTTGAGTATTTCAATGTAGAAAGCCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR TCA 90 bp TGGCATTTTTGGCTAATCCACTTAGTGTTTCCTTTAGGCAAGAAGTaGATTCTTGTTGGGAGGTCATATCACTGCCCACTCTCCCTGCAG +
Preference number: 1 (lower is better)
Translates to: WHFWLIHLVFPLGKK*ILVGRSYHCPLSLQ
Trigger: CTGCAGGGAGAGTGGGCAGTGATATGACCTCCCAACAAGAATTCACTTCTTGCCTAAAGGAAACACTAAGTGGATTAGCCAAAAATGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR TCA 90 bp TCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGAGACTTCTCCCGCAGGTaGCACTCCTGCCTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: SPAGDTPASGPNGSADSRDFSRR*HSCLRS
Trigger: GGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTC...TCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
3UTR-3UTR TCA 90 bp AATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCGTGGGCCCGAAAGATTaGGGGCATCCAGGTCAAAGT +
Preference number: 2 (lower is better)
Translates to: NGMTEGSGQTSPAGDTPAVGPKD*GHPGQS
Trigger: ACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCAC...GGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
3UTR-3UTR CCA 90 bp CAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACGACACTGTTCACCACTaGCACCTGGTGGGCCCGAAA +
Preference number: 2 (lower is better)
Translates to: QTSPAGDTPASGPNGSADDTVHH*HLVGPK
Trigger: TTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTC...GTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
3UTR-3UTR TCA 90 bp GTTGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAGACTTCTCCCGCAGGTaGCACTCCTGCCTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: VVFHMIRHCSPLAPGGPEDFSRR*HSCLRS
Trigger: GGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTC...TTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
3UTR CAA 90 bp ATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATaGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCTGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: MIRHCSPLAPGGPER*RASRSKLRPGGWGR
Trigger: TCTTCCCCAGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495624.1
3UTR-3UTR TCA 90 bp TCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGAAGGCTGGGGAAGAGATaGAGGGACTCAGATAGTTGC +
Preference number: 2 (lower is better)
Translates to: SPAGDTPASGPNGSADSRRLGKR*RDSDSC
Trigger: GCAACTATCTGAGTCCCTTCATCTCTTCCCCAGCCT...TCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495624.1
3UTR CAA 90 bp ATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATaGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: MIRHCSPLAPGGPER*RASRSKLRPGGISP
Trigger: TGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR TCA 90 bp CACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCATCCCAATGGTTCTGCTaGCTCCAGATGTTCCCCATA +
Preference number: 2 (lower is better)
Translates to: HCSPLAPGGPERLRASRSSQWFC*LQMFPI
Trigger: TATGGGGAACATCTGGAGTCAGCAGAACCATTGGGA...TGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
3UTR-3UTR GCA 90 bp GTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCGAGAGCTTTTGGAACTaGTCCACCAGGTGGGGTTCT +
Preference number: 2 (lower is better)
Translates to: VWHNLEWDDRGQRADFSRESFWN*STRWGS
Trigger: AGAACCCCACCTGGTGGAGCAGTTCCAAAAGCTCTC...GCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CCA 90 bp GTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCTGGCACAATCTTGAATaGGATGACAGAGGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: VWHNLEWDDRGQRADFSRWHNLE*DDRGQR
Trigger: CCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCA...GCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
3UTR-3UTR CCA 90 bp TGCCCCTCCTCCCCAGATCCAAGAGAGGGAGTAGAGACAAGGCACAAAGACCCTAGGAAGGTCAGGGGCTaGGTTCACCCATATCACACA +
Preference number: 2 (lower is better)
Translates to: CPSSPDPREGVETRHKDPRKVRG*VHPYHT
Trigger: TGTGTGATATGGGTGAACCCAGCCCCTGACCTTCCT...AGGGTCTTTGTGCCTTGTCTCTACTCCCTCTCTTGGATCTGGGGAGGAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CCA 90 bp CACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAACGAGCCTTTTGAGTaGTTTCACTGTCTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: HCSPLAPGGPERLRASRSNEPFE*FHCLWG
Trigger: CCCCCACAGACAGTGAAACCACTCAAAAGGCTCGTT...TGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CCA 90 bp GAAAGATGGCCATCCAGTCTCCTTTGCCAACTGAGGTGCAGACTGAGTTGTGGAACCACTGGCACCTGGTaGGCCCGAAAGATTGAGGGC +
Preference number: 2 (lower is better)
Translates to: ERWPSSLLCQLRCRLSCGTTGTW*ARKIEG
Trigger: GCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGT...TCCACAACTCAGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGGCCATCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CCA 90 bp CAGCTGGTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCGCCTCTGAGAGCTTTTaGAACTGCTCCACCAGGTGG +
Preference number: 2 (lower is better)
Translates to: QLVWHNLEWDDRGQRADFASESF*NCSTRW
Trigger: CCACCTGGTGGAGCAGTTCCAAAAGCTCTCAGAGGC...GAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CCA 90 bp GTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCACAGAAGCCCCTCCATGGCCTTaGTCAGCTCTTCTTCCGACA +
Preference number: 2 (lower is better)
Translates to: VPTNICQPRSVDPLGATEAPPWP*SALLPT
Trigger: TGTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGC...TTCTGTGGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR TCA 90 bp GTATCAGTTCTGCTAGGGTCTTCAGAGAGACCGAGGGCCCCAAAACAGTGCTACCGGCAGCACACAGTGTaGACTCCATACCTGTCATGG +
Preference number: 2 (lower is better)
Translates to: VSVLLGSSERPRAPKQCYRQHTV*TPYLSW
Trigger: CCATGACAGGTATGGAGTTCACACTGTGTGCTGCCG...GTAGCACTGTTTTGGGGCCCTCGGTCTCTCTGAAGACCCTAGCAGAACTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp AGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTTTTTAGGACAGACGTaGAGATCCATCCCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: RHCSPLAPGGPERLRASRFLGQT*RSIPSS
Trigger: GCTACTGGGGATGGATCTTCACGTCTGTCCTAAAAA...CCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495624.1
3UTR-3UTR GCA 90 bp ACCAGAGTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCCCATCCAGTCTCCTTTaGCAACTGAGGTGCAGACTG +
Preference number: 2 (lower is better)
Translates to: TRVPTNICQPRSVDPLGAPSSLL*QLRCRL
Trigger: CAGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGG...GGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTACTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CAA 90 bp TTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTaGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGT +
Preference number: 2 (lower is better)
Translates to: FLERQRKNLSWYGTI*NGMTEGSGQTSPAG
Trigger: ACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp CAGCTGGTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCAATGGTTCTGCTaGCTCCAGATGTTCCCCATA +
Preference number: 2 (lower is better)
Translates to: QLVWHNLEWDDRGQRADFSQWFC*LQMFPI
Trigger: TATGGGGAACATCTGGAGTCAGCAGAACCATTGGGA...GAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
3UTR-3UTR TCA 90 bp ACCAGAGTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCCGTAAATGGACTAGATaGGGGGAAATAGGATGGGCC +
Preference number: 2 (lower is better)
Translates to: TRVPTNICQPRSVDPLGARKWTR*GEIGWA
Trigger: GGCCCATCCTATTTCCCCTCATCTAGTCCATTTACG...GGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTACTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp TGCCAGGAAGACGGGGAGTCAGTGAGAATCGTAAATGGACTAGATGAGGGGAAAACCAGGACAGCCAGCTaGGCTGACCAGAGTACCTAC +
Preference number: 2 (lower is better)
Translates to: CQEDGESVRIVNGLDEGKTRTAS*ADQSTY
Trigger: GTAGGTACTCTGGTCAGCTCAGCTGGCTGTCCTGGT...TTTCCCCTCATCTAGTCCATTTACGATTCTCACTGACTCCCCGTCTTCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp TGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCACATATTTTGCACATaGCGCTGTGCTGCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: WWARKIEGIQVKVEARRHHIFCT*RCAAPD
Trigger: ATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTG...ATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR TCA 90 bp ACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGTCAAAACGAGCCTTTTaGGTGGTTTCACTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: TWWARKIEGIQVKVEARRSKRAF*VVSLSV
Trigger: CACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGA...CCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR TCA 90 bp AGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAACGAGCCTTTTaGGTGGTTTCACTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: RHCSPLAPGGPERLRASRSKRAF*VVSLSV
Trigger: CACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGA...CCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR GCA 90 bp TCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGACCTAAATCTTGTAGCTaGTGCATAAGATCCAGCACC +
Preference number: 2 (lower is better)
Translates to: SPAGDTPASGPNGSADSRPKSCS*CIRSST
Trigger: GGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGG...TCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR TCA 90 bp CTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACCATCCAGGTCAAAGTTaGGGCCAGGAGGCATCTCTC +
Preference number: 2 (lower is better)
Translates to: LQMFPIAGTQRGKRVVFHHPGQS*GQEASL
Trigger: GAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATG...GTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CCA 90 bp TGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGGATGTTCCCCATAGCTaGGACTCAGAGAGGAAAACG +
Preference number: 2 (lower is better)
Translates to: CVSHDQTLFTTGTWWARKDVPHS*DSERKT
Trigger: CGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATC...CTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
3UTR-3UTR CCA 90 bp GTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCACAGAAAACGAGCCTTTTGAGTaGTTTCACTGTCTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: VPTNICQPRSVDPLGATENEPFE*FHCLWG
Trigger: CCCCCACAGACAGTGAAACCACTCAAAAGGCTCGTT...TTCTGTGGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR TCA 90 bp CCGACATGCTGGAGTTCTGAAGGTCAGTGGCATTTTTGGCTAATCCACTTAGTGTCTCCCTGCAGCCTCTaGGAGCTTTTGGAACTGCTC +
Preference number: 2 (lower is better)
Translates to: PTCWSSEGQWHFWLIHLVSPCSL*ELLELL
Trigger: GAGCAGTTCCAAAAGCTCTCAGAGGCTGCAGGGAGA...CACTAAGTGGATTAGCCAAAAATGCCACTGACCTTCAGAACTCCAGCATGTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR GCA 90 bp GCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCGTCTCTGCCTCAAACTaGTCACATATTTTGCACATG +
Preference number: 2 (lower is better)
Translates to: ARKIEGIQVKVEARRHLSVSASN*SHILHM
Trigger: CATGTGCAAAATATGTGAGCAGTTTGAGGCAGAGAC...GGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR GCA 90 bp GCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAAATCTTGTAGCTGCTaGATAAGATCCAGCACCATC +
Preference number: 2 (lower is better)
Translates to: ARKIEGIQVKVEARRHLSKSCSC*IRSSTI
Trigger: GATGGTGCTGGATCTTATGCAGCAGCTACAAGATTT...GGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR GCA 90 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTAGCCAACTCCTTCATTaGCTTCTCGAACTCCGCAGT +
Preference number: 2 (lower is better)
Translates to: VSHDQTLFTTGTWWARKISQLLH*LLELRS
Trigger: ACTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCT...AATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CCA 90 bp GTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTGATGTTCCCCATAGCTaGGACTCAGAGAGGAAAACG +
Preference number: 2 (lower is better)
Translates to: VLLTPDVPHSWDSERKTCDVPHS*DSERKT
Trigger: CGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATC...ACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000368072.10
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
3UTR-3UTR CCA 90 bp TTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGGATGTTCCCCATAGCTaGGACTCAGAGAGGAAAACG +
Preference number: 2 (lower is better)
Translates to: FHMIRHCSPLAPGGPERLDVPHS*DSERKT
Trigger: CGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATC...CAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
3UTR-3UTR CCA 90 bp TTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAACGAGCCTTTTGAGTaGTTTCACTGTCTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: FHMIRHCSPLAPGGPERLNEPFE*FHCLWG
Trigger: CCCCCACAGACAGTGAAACCACTCAAAAGGCTCGTT...CAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CCA 90 bp GGAGTAGGGTTCACAGAAATGGCCTGTGAAACAGACCCTATTCCTAGAGAGACAAACTGCTCCACCAGGTaGGGTTCTTCCTCAGCCAAC +
Preference number: 2 (lower is better)
Translates to: GVGFTEMACETDPIPRETNCSTR*GSSSAN
Trigger: GTTGGCTGAGGAAGAACCCCACCTGGTGGAGCAGTT...TGTCTCTCTAGGAATAGGGTCTGTTTCACAGGCCATTTCTGTGAACCCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR CAA 90 bp AAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGGCCAGTTaGGGTGCTGTCAAACTTGCCGGGTCGGCAGCACACAGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: KYMINGLNLQNSLAS*GAVKLAGSAAHSVN
Trigger: GTTCACACTGTGTGCTGCCGACCCGGCAAGTTTGACAGCACCCAAACTGGCCAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp GTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCACAGAAGCAACTTACGGAAGCTaGGGAAGATCAGAAAAAGAC +
Preference number: 2 (lower is better)
Translates to: VPTNICQPRSVDPLGATEATYGS*GRSEKD
Trigger: GTCTTTTTCTGATCTTCCTCAGCTTCCGTAAGTTGC...TTCTGTGGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTCACATATTTTGCACATaGCGCTGTGCTGCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: VSHDQTLFTTGTWWARKIHIFCT*RCAAPD
Trigger: ATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTG...AATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR TCA 90 bp GAAAGATGGCCATCCAGTCTCCTTTGCCAACTGAGGTGCAGACTGAGTTGTGGAGACATGCTGGAGTTCTaGAGGTCAGTGGCATTTTTG +
Preference number: 2 (lower is better)
Translates to: ERWPSSLLCQLRCRLSCGDMLEF*RSVAFL
Trigger: CAAAAATGCCACTGACCTTCAGAACTCCAGCATGTC...TCCACAACTCAGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGGCCATCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR GCA 90 bp GTTGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAACCTAAATCTTGTAGCTaGTGCATAAGATCCAGCACC +
Preference number: 2 (lower is better)
Translates to: VVFHMIRHCSPLAPGGPEPKSCS*CIRSST
Trigger: GGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGG...TTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CCA 90 bp GTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAACCTCAGCTGGTATaGCACAATCTTGAATGGGAT +
Preference number: 2 (lower is better)
Translates to: VPMVLLTPDVPHSWDSERKPQLV*HNLEWD
Trigger: ATCCCATTCAAGATTGTGCCATACCAGCTGAGGTTT...CCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
3UTR-3UTR CCA 90 bp GTTGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGCTCTTTTGGAGGATaGCCTAAATCTTGTAGCTGC +
Preference number: 2 (lower is better)
Translates to: VVFHMIRHCSPLAPGGPESSFGG*PKSCSC
Trigger: GCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCT...TTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CCA 90 bp ATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCTTCACCACTGGCACCTaGTGGGCCCGAAAGATTGAG +
Preference number: 2 (lower is better)
Translates to: MFPIAGTQRGKRVVFHMIFTTGT*WARKIE
Trigger: CTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAA...GATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
3UTR-3UTR CCA 90 bp CACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAATTTTCACCTTAGGTaGAATCCTGAGAGGTTAAAG +
Preference number: 2 (lower is better)
Translates to: HCSPLAPGGPERLRASRSNFHLR*NPERLK
Trigger: CTTTAACCTCTCAGGATTCCACCTAAGGTGAAAATT...TGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495624.1
3UTR CAA 90 bp AAGATGGCCATCCAGTCTCCTTTGCCAACTGAGGTGCAGACTGAGTaGTGGAAGGTGGGTGTTGATGGAACCCAGCATTACAATATTGTG +
Preference number: 2 (lower is better)
Translates to: KMAIQSPLPTEVQTE*WKVGVDGTQHYNIV
Trigger: CACAATATTGTAATGCTGGGTTCCATCAACACCCACCTTCCACAACTCAGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGGCCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR GCA 90 bp TTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGCCTAAATCTTGTAGCTaGTGCATAAGATCCAGCACC +
Preference number: 2 (lower is better)
Translates to: FHMIRHCSPLAPGGPERLPKSCS*CIRSST
Trigger: GGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGG...CAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CCA 90 bp AAGATCCAGCACCATCTCAAAACGAGCCTTTTGAGTGGTTTCACTGTCTGTGGGGATGTTCCCCATAGCTaGGACTCAGAGAGGAAAACG +
Preference number: 2 (lower is better)
Translates to: KIQHHLKTSLLSGFTVCGDVPHS*DSERKT
Trigger: CGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATC...CCCACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAGATGGTGCTGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR CAA 90 bp AAAGGAAAGAAAGTGCATGCCCCAAAAGGGATGCCTTCCTTCACCTaGCAGGTAGCTGGAACTTTGATAGTGGCAGAAACCACAATGGAG +
Preference number: 2 (lower is better)
Translates to: KGKKVHAPKGMPSFT*QVAGTLIVAETTME
Trigger: CTCCATTGTGGTTTCTGCCACTATCAAAGTTCCAGCTACCTGCAAGGTGAAGGAAGGCATCCCTTTTGGGGCATGCACTTTCTTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp GTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGCACATATTTTGCACATaGCGCTGTGCTGCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: VPHSWDSERKTCCVSHDQHIFCT*RCAAPD
Trigger: ATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTG...CTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR GCA 90 bp TTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGGTCTCTGCCTCAAACTaGTCACATATTTTGCACATG +
Preference number: 2 (lower is better)
Translates to: FHMIRHCSPLAPGGPERLVSASN*SHILHM
Trigger: CATGTGCAAAATATGTGAGCAGTTTGAGGCAGAGAC...CAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CCA 90 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTAAACCTCAGCTGGTATaGCACAATCTTGAATGGGAT +
Preference number: 2 (lower is better)
Translates to: VSHDQTLFTTGTWWARKIKPQLV*HNLEWD
Trigger: ATCCCATTCAAGATTGTGCCATACCAGCTGAGGTTT...AATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
3UTR-3UTR CCA 90 bp GGCTGGAGCTTTAAGGAGAAAATAGTGACACTGAAGCCCCATGACTATATCACAAGGAAGGTCAGGGGCTaGGTTCACCCATATCACACA +
Preference number: 2 (lower is better)
Translates to: GWSFKEKIVTLKPHDYITRKVRG*VHPYHT
Trigger: TGTGTGATATGGGTGAACCCAGCCCCTGACCTTCCT...TGTGATATAGTCATGGGGCTTCAGTGTCACTATTTTCTCCTTAAAGCTCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CCA 90 bp CCAGGACAGCCAGCTGAGCTGACCAGAGTACCTACCAACATATGTCAGCCAAGGCATGTGAATTTGCTTTaGAGAGACTTATCTTCTGAG +
Preference number: 2 (lower is better)
Translates to: PGQPAELTRVPTNICQPRHVNLL*RDLSSE
Trigger: CTCAGAAGATAAGTCTCTCCAAAGCAAATTCACATG...CCTTGGCTGACATATGTTGGTAGGTACTCTGGTCAGCTCAGCTGGCTGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp TTTTTCCATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCTCCCAATGGTTCTGCTaGCTCCAGATGTTCCCCATA +
Preference number: 2 (lower is better)
Translates to: FFHLWQNRDVLHSDLGSSSQWFC*LQMFPI
Trigger: TATGGGGAACATCTGGAGTCAGCAGAACCATTGGGA...GGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGATGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp GTTGCTGTGATATCCAAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGGACAGCCAGCTGAGCTaGCCAGAGTACCTACCAACA +
Preference number: 2 (lower is better)
Translates to: VAVISKYMINGLNLQNSLDSQLS*PEYLPT
Trigger: TGTTGGTAGGTACTCTGGTCAGCTCAGCTGGCTGTC...CAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTTGGATATCACAGCAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CCA 90 bp CCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATAGCTCTTTTGGAGGATaGCCTAAATCTTGTAGCTGC +
Preference number: 2 (lower is better)
Translates to: PDVPHSWDSERKTCCVSHSSFGG*PKSCSC
Trigger: GCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCT...ATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CCA 90 bp ACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCAAGCTCTTTTGGAGGATaGCCTAAATCTTGTAGCTGC +
Preference number: 2 (lower is better)
Translates to: TPDVPHSWDSERKTCCVSSSFGG*PKSCSC
Trigger: GCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCT...TGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR TCA 90 bp ATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCTCAAAACGAGCCTTTTaGGTGGTTTCACTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: MFPIAGTQRGKRVVFHMISKRAF*VVSLSV
Trigger: CACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGA...GATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CCA 90 bp GGCTGGAGCTTTAAGGAGAAAATAGTGACACTGAAGCCCCATGACTATATCACAGAACATGAGGAAAGATaGCCATCCAGTCTCCTTTGC +
Preference number: 2 (lower is better)
Translates to: GWSFKEKIVTLKPHDYITEHEER*PSSLLC
Trigger: GCAAAGGAGACTGGATGGCCATCTTTCCTCATGTTC...TGTGATATAGTCATGGGGCTTCAGTGTCACTATTTTCTCCTTAAAGCTCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp GTTGCTGTGATATCCAAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGGTGGAAGGTGGGTGTTaGTGGAACCCAGCATTACAA +
Preference number: 2 (lower is better)
Translates to: VAVISKYMINGLNLQNSLVEGGC*WNPALQ
Trigger: TTGTAATGCTGGGTTCCATCAACACCCACCTTCCAC...CAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTTGGATATCACAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp TTTTTCCATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCACGCTGTGCTGCTCCTaGTATTTTTCAAACTGCTCT +
Preference number: 2 (lower is better)
Translates to: FFHLWQNRDVLHSDLGSSTLCCS*YFSNCS
Trigger: AGAGCAGTTTGAAAAATATCAGGAGCAGCACAGCGT...GGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGATGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR GCA 90 bp CTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTTGAATAGGAAAGAAAGTGCATaGCCCAAAAGGGATGCCTTC +
Preference number: 2 (lower is better)
Translates to: LFLERQRKNLSWYGTILNRKESA*PKRDAF
Trigger: GAAGGCATCCCTTTTGGGGCATGCACTTTCTTTCCT...ATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR GCA 90 bp ATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCATGCTCTGTCTCTGCCTCAAACTaGTCACATATTTTGCACATG +
Preference number: 2 (lower is better)
Translates to: ISGRTETFYIQIWALPCSVSASN*SHILHM
Trigger: CATGTGCAAAATATGTGAGCAGTTTGAGGCAGAGAC...AGAGCATGGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CCA 90 bp GTTGCTGTGATATCCAAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGGATGTTCCCCATAGCTaGGACTCAGAGAGGAAAACG +
Preference number: 2 (lower is better)
Translates to: VAVISKYMINGLNLQNSLDVPHS*DSERKT
Trigger: CGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATC...CAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTTGGATATCACAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CAA 90 bp CTGAGTTGTGGAAGGTGGGTGTTGATGGAACCCAGCATTACAATATaGTGTAGAACTAGTCTCCTAATATACCTCACTCTGCAACTTACG +
Preference number: 2 (lower is better)
Translates to: LSCGRWVLMEPSITI*CRTSLLIYLTLQLT
Trigger: CGTAAGTTGCAGAGTGAGGTATATTAGGAGACTAGTTCTACACAATATTGTAATGCTGGGTTCCATCAACACCCACCTTCCACAACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR GCA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCGGGTTTATTTGTGTCTaGCAGGAAGACGGGGAGTCA +
Preference number: 2 (lower is better)
Translates to: PRDRILRESCISNKPECIGFICV*QEDGES
Trigger: TGACTCCCCGTCTTCCTGGCAGACACAAATAAACCC...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCATACTCAAGGGAACATaGGGAAAGATGGCCATCCAG +
Preference number: 2 (lower is better)
Translates to: PRDRILRESCISNKPECIILKGT*GKMAIQ
Trigger: CTGGATGGCCATCTTTCCTCATGTTCCCTTGAGTAT...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CCA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCCACCTTGCAGGTAGCTaGAACTTTGATAGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: PRDRILRESCISNKPECIHLAGS*NFDSGR
Trigger: TCTGCCACTATCAAAGTTCCAGCTACCTGCAAGGTG...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR GCA 90 bp ATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCATGCTCTTCTATTGTGATTAGATaGAAAAGCCCTTTCCCTTTA +
Preference number: 2 (lower is better)
Translates to: ISGRTETFYIQIWALPCSSIVIR*KSPFPL
Trigger: TAAAGGGAAAGGGCTTTTGCATCTAATCACAATAGA...AGAGCATGGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR GCA 90 bp GTTGCTGTGATATCCAAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGAAATCTTGTAGCTGCTaGATAAGATCCAGCACCATC +
Preference number: 2 (lower is better)
Translates to: VAVISKYMINGLNLQNSLKSCSC*IRSSTI
Trigger: GATGGTGCTGGATCTTATGCAGCAGCTACAAGATTT...CAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTTGGATATCACAGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CCA 90 bp TTTTTCCATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCAAGCCAGAATGTATCTaGGGAAGAATAGCCATTAAT +
Preference number: 2 (lower is better)
Translates to: FFHLWQNRDVLHSDLGSSKPECI*GRIAIN
Trigger: ATTAATGGCTATTCTTCCCCAGATACATTCTGGCTT...GGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGATGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CCA 90 bp GTTGCTGTGATATCCAAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGTTTTACATTCAGATCTaGGCTCTTCCATGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: VAVISKYMINGLNLQNSLFYIQI*ALPCSG
Trigger: ACCAGAGCATGGAAGAGCCCAGATCTGAATGTAAAA...CAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTTGGATATCACAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR TCA 90 bp GTTGCTGTGATATCCAAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGTTCTTTATCACAGCTTaGGCTCAAAAAGGTTGGGAT +
Preference number: 2 (lower is better)
Translates to: VAVISKYMINGLNLQNSLFFITA*AQKGWD
Trigger: ATCCCAACCTTTTTGAGCTCAAGCTGTGATAAAGAA...CAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTTGGATATCACAGCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR GCA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCATATTTATTATATTCTaGCCCATGGGGCCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: PRDRILRESCISNKPECIIFIIF*PMGPCR
Trigger: CCTGCAAGGCCCCATGGGGCAGAATATAATAAATAT...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR GCA 90 bp CTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTTGAATTCTATTGTGATTAGATaGAAAAGCCCTTTCCCTTTA +
Preference number: 2 (lower is better)
Translates to: LFLERQRKNLSWYGTILNSIVIR*KSPFPL
Trigger: TAAAGGGAAAGGGCTTTTGCATCTAATCACAATAGA...ATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CAA 90 bp CAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGCATCCAGGTCAAAGTaGAGGCCAGGAGGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: QTLFTTGTWWARKIEGIQASRSK*RPGGWG
Trigger: TCCCCAGCCTCCTGGCCTCAACTTTGACCTGGATGC...CTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495624.1
3UTR-3UTR CAA 90 bp AATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCTGGTATGGCACAATCTaGAATGGGATGACAGAGGGC +
Preference number: 3 (lower is better)
Translates to: NGMTEGSGQTSPAGDTPAWYGTI*NGMTEG
Trigger: GCCCTCTGTCATCCCATTCAAGATTGTGCCATACCA...GGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
3UTR-3UTR CAA 90 bp AATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCCTCCAGCCAGCTCTTTaGGAGGATGGCCTAAATCTT +
Preference number: 3 (lower is better)
Translates to: NGMTEGSGQTSPAGDTPALQPAL*EDGLNL
Trigger: AAGATTTAGGCCATCCTCCAAAAGAGCTGGCTGGAG...GGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CAA 90 bp CACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAGCATCCAGGTCAAAGTaGAGGCCAGGAGGCATCTCT +
Preference number: 3 (lower is better)
Translates to: HCSPLAPGGPERLRASRSASRSK*RPGGIS
Trigger: AGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGC...TGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CAA 90 bp GCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCGGTGGGCCCGAAAGATaGAGGGCATCCAGGTCAAAG +
Preference number: 3 (lower is better)
Translates to: AGDTPASGPNGSADSRCSGGPER*RASRSK
Trigger: CTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACC...GGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
3UTR CCA 72 bp CATCCCCTTCGTCCATGCCTAGCCCCTCCATGGCCTTaGTCAGCTCTTCTTCCGACATGCTGGAGTTCTGAA +
Preference number: 3 (lower is better)
Translates to: HPLRPCLAPPWP*SALLPTCWSSE
Trigger: TTCAGAACTCCAGCATGTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGCTAGGCATGGACGAAGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR CCA 72 bp GAGGAAAAACCTCAGCTGGTATGGCACAATCTTGAATaGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGC +
Preference number: 3 (lower is better)
Translates to: EEKPQLVWHNLE*DDRGQRADFSR
Trigger: GCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CCA 72 bp GCAGCCTCTGAGAGCTTTTGGAACTGCTCCACCAGGTaGGGTTCTTCCTCAGCCAACTCCTTCATTGCCTTC +
Preference number: 3 (lower is better)
Translates to: AASESFWNCSTR*GSSSANSFIAF
Trigger: GAAGGCAATGAAGGAGTTGGCTGAGGAAGAACCCCACCTGGTGGAGCAGTTCCAAAAGCTCTCAGAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CAA 90 bp CCAGGACAGCCAGCTGAGCTGACCAGAGTACCTACCAACATATGTCAGCCAAGGTGGTATGGCACAATCTaGAATGGGATGACAGAGGGC +
Preference number: 3 (lower is better)
Translates to: PGQPAELTRVPTNICQPRWYGTI*NGMTEG
Trigger: GCCCTCTGTCATCCCATTCAAGATTGTGCCATACCA...CCTTGGCTGACATATGTTGGTAGGTACTCTGGTCAGCTCAGCTGGCTGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CAA 90 bp ACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCTCAAAACGAGCCTTTaGAGTGGTTTCACTGTCTGT +
Preference number: 3 (lower is better)
Translates to: TWWARKIEGIQVKVEARRLKTSL*SGFTVC
Trigger: ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAG...CCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR TCA 72 bp GTGCTGTCAAACTTGCCGGGTCGGCAGCACACAGTGTaGACTCCATACCTGTCATGGGCAATAGGAATGCAT +
Preference number: 3 (lower is better)
Translates to: VLSNLPGRQHTV*TPYLSWAIGMH
Trigger: ATGCATTCCTATTGCCCATGACAGGTATGGAGTTCACACTGTGTGCTGCCGACCCGGCAAGTTTGACAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR TCA 72 bp CTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATaGTCAGACACTGTTCACCACTGGCACCTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: LGLREENVLCFT*SDTVHHWHLVG
Trigger: GCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
3UTR GCA 72 bp CTAGGGTCTTCAGAGAGACCGAGGGCCCCAAAACAGTaGTACTCAAAGATGATCTGCAGACTTGTGCTGGTC +
Preference number: 3 (lower is better)
Translates to: LGSSERPRAPKQ*YSKMICRLVLV
Trigger: GACCAGCACAAGTCTGCAGATCATCTTTGAGTAGCACTGTTTTGGGGCCCTCGGTCTCTCTGAAGACCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CCA 72 bp CCAGGAGGCATCTCTCCAGCCAGCTCTTTTGGAGGATaGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGC +
Preference number: 3 (lower is better)
Translates to: PGGISPASSFGG*PKSCSCCIRSS
Trigger: GCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCTGGCTGGAGAGATGCCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR CCA 72 bp TCACATGATCAGACACTGTTCACCACTGGCACCTGGTaGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTT +
Preference number: 3 (lower is better)
Translates to: SHDQTLFTTGTW*ARKIEGIQVKV
Trigger: AACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
3UTR CCA 72 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTaGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAA +
Preference number: 3 (lower is better)
Translates to: VSHDQTLFTTGT*WARKIEGIQVK
Trigger: TTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
3UTR-3UTR CAA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCACAGGTAGCTGGAACTTaGATAGTGGCAGAAACCACA +
Preference number: 3 (lower is better)
Translates to: YGTILNGMTEGSGQTSPAQVAGT*IVAETT
Trigger: TGTGGTTTCTGCCACTATCAAAGTTCCAGCTACCTG...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CAA 90 bp GTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGGGTGGGCCCGAAAGATaGAGGGCATCCAGGTCAAAG +
Preference number: 3 (lower is better)
Translates to: VPHSWDSERKTCCVSHDQGGPER*RASRSK
Trigger: CTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACC...CTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
3UTR-3UTR CAA 90 bp AGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGGCAAGAAGTGAATTCTaGTTGGGAGGTCATATCACT +
Preference number: 3 (lower is better)
Translates to: RHCSPLAPGGPERLRASRARSEF*LGGHIT
Trigger: AGTGATATGACCTCCCAACAAGAATTCACTTCTTGC...CCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CAA 90 bp ACCAGAGTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCATCCTTGTCCAGTTTTaGGCTGGAGCTTTAAGGAGA +
Preference number: 3 (lower is better)
Translates to: TRVPTNICQPRSVDPLGAILVQF*AGALRR
Trigger: TCTCCTTAAAGCTCCAGCCAAAAACTGGACAAGGAT...GGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTACTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CAA 90 bp TGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGAACTGCTCACATATTTaGCACATGACGCTGTGCTGC +
Preference number: 3 (lower is better)
Translates to: CVSHDQTLFTTGTWWARKNCSHI*HMTLCC
Trigger: GCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTT...CTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CAA 90 bp GTTGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAACTGCTCACATATTTaGCACATGACGCTGTGCTGC +
Preference number: 3 (lower is better)
Translates to: VVFHMIRHCSPLAPGGPENCSHI*HMTLCC
Trigger: GCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTT...TTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CAA 90 bp GGCTGGAGCTTTAAGGAGAAAATAGTGACACTGAAGCCCCATGACTATATCACAAGCCCCTCCATGGCCTaGGTCAGCTCTTCTTCCGAC +
Preference number: 3 (lower is better)
Translates to: GWSFKEKIVTLKPHDYITSPSMA*VSSSSD
Trigger: GTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGCT...TGTGATATAGTCATGGGGCTTCAGTGTCACTATTTTCTCCTTAAAGCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CAA 90 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTAACTGCTCACATATTTaGCACATGACGCTGTGCTGC +
Preference number: 3 (lower is better)
Translates to: VSHDQTLFTTGTWWARKINCSHI*HMTLCC
Trigger: GCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTT...AATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CAA 90 bp GTTGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAACTCAAAACGAGCCTTTaGAGTGGTTTCACTGTCTGT +
Preference number: 3 (lower is better)
Translates to: VVFHMIRHCSPLAPGGPELKTSL*SGFTVC
Trigger: ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAG...TTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR TCA 72 bp AGAGACCGAGGGCCCCAAAACAGTGCTACTCAAAGATaGTCTGCAGACTTGTGCTGGTCAGTGAACACCTTT +
Preference number: 3 (lower is better)
Translates to: RDRGPQNSATQR*SADLCWSVNTF
Trigger: AAAGGTGTTCACTGACCAGCACAAGTCTGCAGATCATCTTTGAGTAGCACTGTTTTGGGGCCCTCGGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CCA 72 bp CAGTCTCCTTTGCCAACTGAGGTGCAGACTGAGTTGTaGAAGGTGGGTGTTGATGGAACCCAGCATTACAAT +
Preference number: 3 (lower is better)
Translates to: QSPLPTEVQTEL*KVGVDGTQHYN
Trigger: ATTGTAATGCTGGGTTCCATCAACACCCACCTTCCACAACTCAGTCTGCACCTCAGTTGGCAAAGGAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CAA 90 bp GGAGTAGGGTTCACAGAAATGGCCTGTGAAACAGACCCTATTCCTAGAGAGACATGGTATGGCACAATCTaGAATGGGATGACAGAGGGC +
Preference number: 3 (lower is better)
Translates to: GVGFTEMACETDPIPRETWYGTI*NGMTEG
Trigger: GCCCTCTGTCATCCCATTCAAGATTGTGCCATACCA...TGTCTCTCTAGGAATAGGGTCTGTTTCACAGGCCATTTCTGTGAACCCTACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CAA 90 bp ACTGGTAGGACAGAAGGCACAAGGTTCATAGAGAAGGGCTCTTTTGTTCTTCCCATGCCTTCCTTCACCTaGCAGGTAGCTGGAACTTTG +
Preference number: 3 (lower is better)
Translates to: TGRTEGTRFIEKGSFVLPMPSFT*QVAGTL
Trigger: CAAAGTTCCAGCTACCTGCAAGGTGAAGGAAGGCAT...GGGAAGAACAAAAGAGCCCTTCTCTATGAACCTTGTGCCTTCTGTCCTACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CAA 90 bp GGCTGGAGCTTTAAGGAGAAAATAGTGACACTGAAGCCCCATGACTATATCACAGCCATCCAGTCTCCTTaGCCAACTGAGGTGCAGACT +
Preference number: 3 (lower is better)
Translates to: GWSFKEKIVTLKPHDYITAIQSP*PTEVQT
Trigger: AGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGGC...TGTGATATAGTCATGGGGCTTCAGTGTCACTATTTTCTCCTTAAAGCTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CAA 90 bp GTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCACAGAAAGGTCAGTGGCATTTTaGGCTAATCCACTTAGTGTT +
Preference number: 3 (lower is better)
Translates to: VPTNICQPRSVDPLGATERSVAF*ANPLSV
Trigger: AACACTAAGTGGATTAGCCAAAAATGCCACTGACCT...TTCTGTGGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR TCA 72 bp AGACGGGGAGTCAGTGAGAATCGTAAATGGACTAGATaGGGGGAAATAGGATGGGCCCTTCTTTATCACAGC +
Preference number: 3 (lower is better)
Translates to: RRGVSENRKWTR*GEIGWALLYHS
Trigger: GCTGTGATAAAGAAGGGCCCATCCTATTTCCCCTCATCTAGTCCATTTACGATTCTCACTGACTCCCCGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR GCA 72 bp AGACCACACTCCTCACTCAGAATATTTATTATATTCTaGCCCATGGGGCCTTGCAGGAAAAGGGACCCAAGC +
Preference number: 3 (lower is better)
Translates to: RPHSSLRIFIIF*PMGPCRKRDPS
Trigger: GCTTGGGTCCCTTTTCCTGCAAGGCCCCATGGGGCAGAATATAATAAATATTCTGAGTGAGGAGTGTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CCA 72 bp ACCCTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTaGTATGGCACAATCTTGAATGGGATGACAGAGGGC +
Preference number: 3 (lower is better)
Translates to: TLFLERQRKNLS*YGTILNGMTEG
Trigger: GCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CCA 72 bp CCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTaGGACTCAGAGAGGAAAACGTGTTGTGTTTCACAT +
Preference number: 3 (lower is better)
Translates to: PMVLLTPDVPHS*DSERKTCCVSH
Trigger: ATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
3UTR-3UTR CAA 90 bp TTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGACTCCAGCCAGCTCTTTaGGAGGATGGCCTAAATCTT +
Preference number: 3 (lower is better)
Translates to: FPIAGTQRGKRVVFHMIRLQPAL*EDGLNL
Trigger: AAGATTTAGGCCATCCTCCAAAAGAGCTGGCTGGAG...TCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR-3UTR CAA 90 bp GTTGCTGTGATATCCAAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGCAGCCAACTCCTTCATaGCCTTCTCGAACTCCGCAG +
Preference number: 3 (lower is better)
Translates to: VAVISKYMINGLNLQNSLQPTPS*PSRTPQ
Trigger: CTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCTG...CAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTTGGATATCACAGCAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CAA 90 bp ACTGGTAGGACAGAAGGCACAAGGTTCATAGAGAAGGGCTCTTTTGTTCTTCCCCCCAGCATTACAATATaGTGTAGAACTAGTCTCCTA +
Preference number: 3 (lower is better)
Translates to: TGRTEGTRFIEKGSFVLPPSITI*CRTSLL
Trigger: TAGGAGACTAGTTCTACACAATATTGTAATGCTGGG...GGGAAGAACAAAAGAGCCCTTCTCTATGAACCTTGTGCCTTCTGTCCTACCAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR TCA 72 bp TGGCTAATCCACTTAGTGTTTCCTTTAGGCAAGAAGTaGATTCTTGTTGGGAGGTCATATCACTGCCCACTC +
Preference number: 3 (lower is better)
Translates to: WLIHLVFPLGKK*ILVGRSYHCPL
Trigger: GAGTGGGCAGTGATATGACCTCCCAACAAGAATTCACTTCTTGCCTAAAGGAAACACTAAGTGGATTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
3UTR-3UTR CAA 90 bp TTTTTCCATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCGAAGGGCTTTCTACATaGAAATACTCAAGGGAACAT +
Preference number: 3 (lower is better)
Translates to: FFHLWQNRDVLHSDLGSSEGLST*KYSREH
Trigger: ATGTTCCCTTGAGTATTTCAATGTAGAAAGCCCTTC...GGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGATGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CAA 90 bp GTTGCTGTGATATCCAAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGGAAGGGCTTTCTACATaGAAATACTCAAGGGAACAT +
Preference number: 3 (lower is better)
Translates to: VAVISKYMINGLNLQNSLEGLST*KYSREH
Trigger: ATGTTCCCTTGAGTATTTCAATGTAGAAAGCCCTTC...CAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTTGGATATCACAGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR-3UTR CAA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCCCCAGCATTACAATATaGTGTAGAACTAGTCTCCTA +
Preference number: 3 (lower is better)
Translates to: PRDRILRESCISNKPECIPSITI*CRTSLL
Trigger: TAGGAGACTAGTTCTACACAATATTGTAATGCTGGG...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR TCA 72 bp TATAGGAGTTGGAATTTCCCAAATAGCCTGAGACCTTaGGAACATTTCCTTCCTCACCAATACCATAAAACA +
Preference number: 3 (lower is better)
Translates to: YRSWNFPNSLRP*EHFLPHQYHKT
Trigger: TGTTTTATGGTATTGGTGAGGAAGGAAATGTTCTCAAGGTCTCAGGCTATTTGGGAAATTCCAACTCCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp AATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCACCACTGGCACCTGGTaGGCCCGAAAGATTGAGGGC +
Preference number: 4 (lower is better)
Translates to: NGMTEGSGQTSPAGDTPATTGTW*ARKIEG
Trigger: GCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGT...GGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp CACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAGACTTCTCCCGCAGGTaGCACTCCTGCCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HCSPLAPGGPERLRASRSDFSRR*HSCLRS
Trigger: GGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTC...TGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp AATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCCGGCAGCACACAGTGTaGACTCCATACCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: NGMTEGSGQTSPAGDTPARQHTV*TPYLSW
Trigger: CCATGACAGGTATGGAGTTCACACTGTGTGCTGCCG...GGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACCATCCCCTTCGTCCATaGCTAGCCCCTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: QTSPAGDTPASGPNGSADHPLRP*LAPPWP
Trigger: AGGCCATGGAGGGGCTAGGCATGGACGAAGGGGATG...GTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp ACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCCTTCTTCCGACATGCTaGAGTTCTGAAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: TEGSGQTSPAGDTPASGPLLPTC*SSEGQW
Trigger: CCACTGACCTTCAGAACTCCAGCATGTCGGAAGAAG...GGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp ACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCACCACTGGCACCTGGTaGGCCCGAAAGATTGAGGGC +
Preference number: 4 (lower is better)
Translates to: TLFTTGTWWARKIEGIQVTTGTW*ARKIEG
Trigger: GCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGT...GACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
3UTR CAA 72 bp CACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATaGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HCSPLAPGGPER*RASRSKLRPGG
Trigger: GCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp CACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAGCCCCTCCATGGCCTTaGTCAGCTCTTCTTCCGACA +
Preference number: 4 (lower is better)
Translates to: HCSPLAPGGPERLRASRSAPPWP*SALLPT
Trigger: TGTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGC...TGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp ATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCAGCTCACCACTGGCACCTGGTaGGCCCGAAAGATTGAGGGC +
Preference number: 4 (lower is better)
Translates to: IEGIQVKVEARRHLSSQLTTGTW*ARKIEG
Trigger: GCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGT...GAGCTGGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR TCA 90 bp CTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCATCTCCCTGCAGCCTCTaGGAGCTTTTGGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: LAPGGPERLRASRSKLRPSPCSL*ELLELL
Trigger: GAGCAGTTCCAAAAGCTCTCAGAGGCTGCAGGGAGA...TGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR TCA 90 bp ACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCCTGGATACTTTTCTGTaGTCTCCTTCAGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: TEGSGQTSPAGDTPASGPLDTFL*SPSVMG
Trigger: ACCCATCACTGAAGGAGATCACAGAAAAGTATCCAG...GGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp TCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGACATCCAGGTCAAAGTTaGGGCCAGGAGGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: SPAGDTPASGPNGSADSRHPGQS*GQEASL
Trigger: GAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATG...TCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAGTGGGCCCGAAAGATTaGGGGCATCCAGGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: HCSPLAPGGPERLRASRSVGPKD*GHPGQS
Trigger: ACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCAC...TGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp CAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTGGGCCCGAAAGATTaGGGGCATCCAGGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: QTLFTTGTWWARKIEGIQVGPKD*GHPGQS
Trigger: ACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCAC...CTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp GTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCACAGAAGACTTCTCCCGCAGGTaGCACTCCTGCCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VPTNICQPRSVDPLGATEDFSRR*HSCLRS
Trigger: GGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTC...TTCTGTGGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp GCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCACCAGGACAGCCAGCTaGGCTGACCAGAGTACCTAC +
Preference number: 4 (lower is better)
Translates to: AGDTPASGPNGSADSRCSTRTAS*ADQSTY
Trigger: GTAGGTACTCTGGTCAGCTCAGCTGGCTGTCCTGGT...GGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAACCAGGACAGCCAGCTaGGCTGACCAGAGTACCTAC +
Preference number: 4 (lower is better)
Translates to: LFTTGTWWARKIEGIQVKTRTAS*ADQSTY
Trigger: GTAGGTACTCTGGTCAGCTCAGCTGGCTGTCCTGGT...TTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR TCA 90 bp ACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCCGGCAGCACACAGTGTaGACTCCATACCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: TLFTTGTWWARKIEGIQVRQHTV*TPYLSW
Trigger: CCATGACAGGTATGGAGTTCACACTGTGTGCTGCCG...GACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR GCA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCACAGCGGCGGCCATCTTaGTACCTCCGACTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: YGTILNGMTEGSGQTSPAQRRPS*YLRLAV
Trigger: TACGGCAAGTCGGAGGTAGCAAGATGGCCGCCGCTG...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp GTTGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAACCTGGCGATCTCTTCTaGGGCCCCGAAGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: VVFHMIRHCSPLAPGGPEPGDLF*GPEASG
Trigger: CCCTGATGCTTCGGGGCCCCAGAAGAGATCGCCAGG...TTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CCA 90 bp ACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCTGCCTAGCCCCTCCATaGCCTTGGTCAGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLFTTGTWWARKIEGIQVCLAPP*PWSALL
Trigger: AAGAAGAGCTGACCAAGGCCATGGAGGGGCTAGGCA...GACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp CAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTTCACCACTGGCACCTaGTGGGCCCGAAAGATTGAG +
Preference number: 4 (lower is better)
Translates to: QTSPAGDTPASGPNGSADFTTGT*WARKIE
Trigger: CTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAA...GTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CCA 90 bp CTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGACACTGTTCACCACTaGCACCTGGTGGGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: LFTTGTWWARKIEGIQVKDTVHH*HLVGPK
Trigger: TTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTC...TTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp GTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCGACACTGTTCACCACTaGCACCTGGTGGGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: VWHNLEWDDRGQRADFSRDTVHH*HLVGPK
Trigger: TTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTC...GCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CCA 90 bp TGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATGACACTGTTCACCACTaGCACCTGGTGGGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: WWARKIEGIQVKVEARRHDTVHH*HLVGPK
Trigger: TTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTC...ATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
3UTR CAA 72 bp CCACCAGGTGGGGTTCTTCCTCAGCCAACTCCTTCATaGCCTTCTCGAACTCCGCAGTGGCTTGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PPGGVLPQPTPS*PSRTPQWLGKP
Trigger: TGGCTTCCCAAGCCACTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCTGAGGAAGAACCCCACCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR TCA 90 bp GCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCCATCCAGGTCAAAGTTaGGGCCAGGAGGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: ARKIEGIQVKVEARRHLSHPGQS*GQEASL
Trigger: GAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATG...GGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR TCA 90 bp GGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCATCCAGGTCAAAGTTaGGGCCAGGAGGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: GPERLRASRSKLRPGGISHPGQS*GQEASL
Trigger: GAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATG...AGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR TCA 90 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGACTTCTCCCGCAGGTaGCACTCCTGCCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSHDQTLFTTGTWWARKIDFSRR*HSCLRS
Trigger: GGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTC...AATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp TGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGAGGCTGGGGAAGAGATaGAGGGACTCAGATAGTTGC +
Preference number: 4 (lower is better)
Translates to: WHNLEWDDRGQRADFSRRRLGKR*RDSDSC
Trigger: GCAACTATCTGAGTCCCTTCATCTCTTCCCCAGCCT...CCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495624.1
CDS-3UTR GCA 90 bp TGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGCATCCCCTTCGTCCATaGCTAGCCCCTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: CVSHDQTLFTTGTWWARKHPLRP*LAPPWP
Trigger: AGGCCATGGAGGGGCTAGGCATGGACGAAGGGGATG...CTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR GCA 90 bp GTTGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAACATCCCCTTCGTCCATaGCTAGCCCCTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: VVFHMIRHCSPLAPGGPEHPLRP*LAPPWP
Trigger: AGGCCATGGAGGGGCTAGGCATGGACGAAGGGGATG...TTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR GCA 90 bp ACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCATATTTATTATATTCTaGCCCATGGGGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TEGSGQTSPAGDTPASGPIFIIF*PMGPCR
Trigger: CCTGCAAGGCCCCATGGGGCAGAATATAATAAATAT...GGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCATTTGGCAGTGTCTCCTaGCGATCTCTTCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PQVPMVLLTPDVPHSWDSFGSVS*RSLLGP
Trigger: GGGCCCCAGAAGAGATCGCCAGGAGACACTGCCAAA...TGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368072.10
CDS-3UTR CCA 90 bp TGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCGAAGAGGGCATCTTTaGCAGTGTCTCCTGGCGATC +
Preference number: 4 (lower is better)
Translates to: WWARKIEGIQVKVEARRHRRGHL*QCLLAI
Trigger: GATCGCCAGGAGACACTGCCAAAGATGCCCTCTTCG...ATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CCA 90 bp GTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAACTCCGCAGTGGCTTaGGAAGCCAGTTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: VWHNLEWDDRGQRADFSRNSAVA*EASSLS
Trigger: CGACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTT...GCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp GCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCAACTCCGCAGTGGCTTaGGAAGCCAGTTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: AGDTPASGPNGSADSRCSNSAVA*EASSLS
Trigger: CGACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTT...GGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp ATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCAGCTCAACTCCGCAGTGGCTTaGGAAGCCAGTTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: IEGIQVKVEARRHLSSQLNSAVA*EASSLS
Trigger: CGACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTT...GAGCTGGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp GGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCAAACTGCTCCACCAGGTaGGGTTCTTCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: GDTPASGPNGSADSRCSPNCSTR*GSSSAN
Trigger: GTTGGCTGAGGAAGAACCCCACCTGGTGGAGCAGTT...TGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp GCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCGCCTCTGAGAGCTTTTaGAACTGCTCCACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGDTPASGPNGSADSRCSASESF*NCSTRW
Trigger: CCACCTGGTGGAGCAGTTCCAAAAGCTCTCAGAGGC...GGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CCAGGACAGCCAGCTGAGCTGACCAGAGTACCTACCAACATATGTCAGCCAAGGGCCCCTCCATGGCCTTaGTCAGCTCTTCTTCCGACA +
Preference number: 4 (lower is better)
Translates to: PGQPAELTRVPTNICQPRAPPWP*SALLPT
Trigger: TGTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGC...CCTTGGCTGACATATGTTGGTAGGTACTCTGGTCAGCTCAGCTGGCTGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp TGCCCCTCCTCCCCAGATCCAAGAGAGGGAGTAGAGACAAGGCACAAAGACCCTTGCCTAGCCCCTCCATaGCCTTGGTCAGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: CPSSPDPREGVETRHKDPCLAPP*PWSALL
Trigger: AAGAAGAGCTGACCAAGGCCATGGAGGGGCTAGGCA...AGGGTCTTTGTGCCTTGTCTCTACTCCCTCTCTTGGATCTGGGGAGGAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp GTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGGACACTGTTCACCACTaGCACCTGGTGGGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: VPMVLLTPDVPHSWDSERDTVHH*HLVGPK
Trigger: TTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTC...CCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CCA 90 bp ACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCTTTGAGTTCTCAGCCTaGAACAGGGAGGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TLFTTGTWWARKIEGIQVFEFSA*NREVRA
Trigger: AGCCCTCACCTCCCTGTTCCAGGCTGAGAACTCAAA...GACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR TCA 90 bp AATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCCCTTTAGGCAAGAAGTaGATTCTTGTTGGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: NGMTEGSGQTSPAGDTPAPLGKK*ILVGRS
Trigger: TGACCTCCCAACAAGAATTCACTTCTTGCCTAAAGG...GGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGGTAGAGATTCCCGATaGCTCTGCAACCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: QTLFTTGTWWARKIEGIQGRDSR*LCNHSG
Trigger: TCCAGAATGGTTGCAGAGTCATCGGGAATCTCTACC...CTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp CCAGGACAGCCAGCTGAGCTGACCAGAGTACCTACCAACATATGTCAGCCAAGGCATCCAGGTCAAAGTTaGGGCCAGGAGGCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PGQPAELTRVPTNICQPRHPGQS*GQEASL
Trigger: GAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATG...CCTTGGCTGACATATGTTGGTAGGTACTCTGGTCAGCTCAGCTGGCTGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGTGGGCCCGAAAGATTaGGGGCATCCAGGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: YGTILNGMTEGSGQTSPAVGPKD*GHPGQS
Trigger: ACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCAC...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp TGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGAGCAGGGTAACCATTTaGGTTCTCAGCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: WHNLEWDDRGQRADFSRRSRVTI*VLSLEQ
Trigger: CTGTTCCAGGCTGAGAACTCAAATGGTTACCCTGCT...CCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACGTGGAAGGTGGGTGTTaGTGGAACCCAGCATTACAA +
Preference number: 4 (lower is better)
Translates to: QTSPAGDTPASGPNGSADVEGGC*WNPALQ
Trigger: TTGTAATGCTGGGTTCCATCAACACCCACCTTCCAC...GTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp GAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCGACAGCCAGCTGAGCTaGCCAGAGTACCTACCAACA +
Preference number: 4 (lower is better)
Translates to: ERLRASRSKLRPGGISPADSQLS*PEYLPT
Trigger: TGTTGGTAGGTACTCTGGTCAGCTCAGCTGGCTGTC...GGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR GCA 90 bp TTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGCATCCCCTTCGTCCATaGCTAGCCCCTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: FHMIRHCSPLAPGGPERLHPLRP*LAPPWP
Trigger: AGGCCATGGAGGGGCTAGGCATGGACGAAGGGGATG...CAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp CAGCTGGTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCGGTAGAAGGGGGTGCTaGGGAGGGTTTGGCTTTATC +
Preference number: 4 (lower is better)
Translates to: QLVWHNLEWDDRGQRADFGRRGC*GGFGFI
Trigger: GATAAAGCCAAACCCTCCCCAGCACCCCCTTCTACC...GAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368072.10
CDS-3UTR CCA 90 bp GAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCAACTCCGCAGTGGCTTaGGAAGCCAGTTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: ERLRASRSKLRPGGISPANSAVA*EASSLS
Trigger: CGACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTT...GGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp CAGCTGGTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCTCGAACTCCGCAGTaGCTTGGGAAGCCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: QLVWHNLEWDDRGQRADFSRTPQ*LGKPVH
Trigger: GTGAACTGGCTTCCCAAGCCACTGCGGAGTTCGAGA...GAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGCCTCTGAGAGCTTTTaGAACTGCTCCACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YGTILNGMTEGSGQTSPAASESF*NCSTRW
Trigger: CCACCTGGTGGAGCAGTTCCAAAAGCTCTCAGAGGC...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp TTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGACCACTGGCACCTGGTaGGCCCGAAAGATTGAGGGC +
Preference number: 4 (lower is better)
Translates to: FHMIRHCSPLAPGGPERLTTGTW*ARKIEG
Trigger: GCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGT...CAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp ACCAGAGTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCTTCACCACTGGCACCTaGTGGGCCCGAAAGATTGAG +
Preference number: 4 (lower is better)
Translates to: TRVPTNICQPRSVDPLGAFTTGT*WARKIE
Trigger: CTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAA...GGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTACTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp GCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCTGGCACAATCTTGAATaGGATGACAGAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AGDTPASGPNGSADSRCSWHNLE*DDRGQR
Trigger: CCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCA...GGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CCA 90 bp TGCCCCTCCTCCCCAGATCCAAGAGAGGGAGTAGAGACAAGGCACAAAGACCCTTTTGAGTTCTCAGCCTaGAACAGGGAGGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CPSSPDPREGVETRHKDPFEFSA*NREVRA
Trigger: AGCCCTCACCTCCCTGTTCCAGGCTGAGAACTCAAA...AGGGTCTTTGTGCCTTGTCTCTACTCCCTCTCTTGGATCTGGGGAGGAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp ACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCTGTGATCTCCTTCAGTaGTGGGTACAGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: TLFTTGTWWARKIEGIQVCDLLQ*WVQHIL
Trigger: AAGGATGTGCTGTACCCATCACTGAAGGAGATCACA...GACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp GATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCGGTAGAGATTCCCGATaGCTCTGCAACCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: DQTLFTTGTWWARKIEGIGRDSR*LCNHSG
Trigger: TCCAGAATGGTTGCAGAGTCATCGGGAATCTCTACC...GATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp CAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTTTTGGAACAAAGTGTaGCCTGAGGTCAACCTGCTC +
Preference number: 4 (lower is better)
Translates to: QTSPAGDTPASGPNGSADFWNKV*PEVNLL
Trigger: GAGCAGGTTGACCTCAGGTCACACTTTGTTCCAAAA...GTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp ACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCTCAATTCTTAATTCATaGAGCCACCCATACAATCAC +
Preference number: 4 (lower is better)
Translates to: TEGSGQTSPAGDTPASGPSILNS*SHPYNH
Trigger: GTGATTGTATGGGTGGCTTCATGAATTAAGAATTGA...GGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368072.10
CDS-3UTR TCA 90 bp TCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATTTTTAGGACAGACGTaGAGATCCATCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SPAGDTPASGPNGSADSRFLGQT*RSIPSS
Trigger: GCTACTGGGGATGGATCTTCACGTCTGTCCTAAAAA...TCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495624.1
CDS-3UTR GCA 90 bp GTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCGCTCTTCTTCCGACATaGTGGAGTTCTGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: VWHNLEWDDRGQRADFSRALLPT*WSSEGQ
Trigger: CTGACCTTCAGAACTCCAGCATGTCGGAAGAAGAGC...GCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp TGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCTGGGGCCTAAATCTTGTAGCTaGTGCATAAGATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: WARKIEGIQVKVEARRLGPKSCS*CIRSST
Trigger: GGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGG...CCCCAGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495624.1
CDS-3UTR GCA 90 bp ACCAGAGTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCATGCCCCAAAAGGGATaGCTTCCTTCACCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TRVPTNICQPRSVDPLGAMPQKG*LPSPCR
Trigger: CCTGCAAGGTGAAGGAAGGCATCCCTTTTGGGGCAT...GGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTACTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTGGGTTTATTTGTGTCTaGCAGGAAGACGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PQVTLLPQVPMVLLTPDVGFICV*QEDGES
Trigger: TGACTCCCCGTCTTCCTGGCAGACACAAATAAACCC...AACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CCAGGACAGCCAGCTGAGCTGACCAGAGTACCTACCAACATATGTCAGCCAAGGCCATCCAGTCTCCTTTaGCAACTGAGGTGCAGACTG +
Preference number: 4 (lower is better)
Translates to: PGQPAELTRVPTNICQPRPSSLL*QLRCRL
Trigger: CAGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGG...CCTTGGCTGACATATGTTGGTAGGTACTCTGGTCAGCTCAGCTGGCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCACCATCCAGTCTCCTTTaGCAACTGAGGTGCAGACTG +
Preference number: 4 (lower is better)
Translates to: PQVPMVLLTPDVPHSWDSPSSLL*QLRCRL
Trigger: CAGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGG...TGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp ACTGGTAGGACAGAAGGCACAAGGTTCATAGAGAAGGGCTCTTTTGTTCTTCCCCCTGGCGATCTCTTCTaGGGCCCCGAAGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: TGRTEGTRFIEKGSFVLPPGDLF*GPEASG
Trigger: CCCTGATGCTTCGGGGCCCCAGAAGAGATCGCCAGG...GGGAAGAACAAAAGAGCCCTTCTCTATGAACCTTGTGCCTTCTGTCCTACCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368072.10
CDS-3UTR CCA 90 bp GTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGCCTGGCGATCTCTTCTaGGGCCCCGAAGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: VPHSWDSERKTCCVSHDQPGDLF*GPEASG
Trigger: CCCTGATGCTTCGGGGCCCCAGAAGAGATCGCCAGG...CTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CCA 90 bp TGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGCGAAGAGGGCATCTTTaGCAGTGTCTCCTGGCGATC +
Preference number: 4 (lower is better)
Translates to: CVSHDQTLFTTGTWWARKRRGHL*QCLLAI
Trigger: GATCGCCAGGAGACACTGCCAAAGATGCCCTCTTCG...CTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CCA 90 bp TGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGAACTGCTCCACCAGGTaGGGTTCTTCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: CVSHDQTLFTTGTWWARKNCSTR*GSSSAN
Trigger: GTTGGCTGAGGAAGAACCCCACCTGGTGGAGCAGTT...CTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp GTTGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAATTCACCACTGGCACCTaGTGGGCCCGAAAGATTGAG +
Preference number: 4 (lower is better)
Translates to: VVFHMIRHCSPLAPGGPEFTTGT*WARKIE
Trigger: CTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAA...TTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp GTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGTGGCACAATCTTGAATaGGATGACAGAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: VPMVLLTPDVPHSWDSERWHNLE*DDRGQR
Trigger: CCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCA...CCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CCA 90 bp TGCCCCTCCTCCCCAGATCCAAGAGAGGGAGTAGAGACAAGGCACAAAGACCCTTTATATTCTGCCCCATaGGGCCTTGCAGGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: CPSSPDPREGVETRHKDPLYSAP*GLAGKG
Trigger: CCCTTTTCCTGCAAGGCCCCATGGGGCAGAATATAA...AGGGTCTTTGTGCCTTGTCTCTACTCCCTCTCTTGGATCTGGGGAGGAGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGAACATGAGGAAAGATaGCCATCCAGTCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LAPGGPERLRASRSKLRPEHEER*PSSLLC
Trigger: GCAAAGGAGACTGGATGGCCATCTTTCCTCATGTTC...TGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR TCA 90 bp GTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTCTCCCTGCAGCCTCTaGGAGCTTTTGGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: VLLTPDVPHSWDSERKTCSPCSL*ELLELL
Trigger: GAGCAGTTCCAAAAGCTCTCAGAGGCTGCAGGGAGA...ACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000462644.5
ENST00000472750.5
CDS-3UTR TCA 90 bp GGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATGTGATCTCCTTCAGTaGTGGGTACAGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: GDTPASGPNGSADSRCSPCDLLQ*WVQHIL
Trigger: AAGGATGTGCTGTACCCATCACTGAAGGAGATCACA...TGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp CTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCACTGGATACTTTTCTGTaGTCTCCTTCAGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: LAPGGPERLRASRSKLRPLDTFL*SPSVMG
Trigger: ACCCATCACTGAAGGAGATCACAGAAAAGTATCCAG...TGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp ACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGACGCTGTGCTGCTCCTaGTATTTTTCAAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: TWWARKIEGIQVKVEARRTLCCS*YFSNCS
Trigger: AGAGCAGTTTGAAAAATATCAGGAGCAGCACAGCGT...CCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp CTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAACGCTGTGCTGCTCCTaGTATTTTTCAAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LAPGGPERLRASRSKLRPTLCCS*YFSNCS
Trigger: AGAGCAGTTTGAAAAATATCAGGAGCAGCACAGCGT...TGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp TCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATCAAAACGAGCCTTTTaGGTGGTTTCACTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SPAGDTPASGPNGSADSRSKRAF*VVSLSV
Trigger: CACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGA...TCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp ACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCTCAAAACGAGCCTTTTaGGTGGTTTCACTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TLFTTGTWWARKIEGIQVSKRAF*VVSLSV
Trigger: CACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGA...GACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCACGTAAATGGACTAGATaGGGGGAAATAGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: YGTILNGMTEGSGQTSPARKWTR*GEIGWA
Trigger: GGCCCATCCTATTTCCCCTCATCTAGTCCATTTACG...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACGCAACTTACGGAAGCTaGGGAAGATCAGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: QTSPAGDTPASGPNGSADATYGS*GRSEKD
Trigger: GTCTTTTTCTGATCTTCCTCAGCTTCCGTAAGTTGC...GTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp TGCCCCTCCTCCCCAGATCCAAGAGAGGGAGTAGAGACAAGGCACAAAGACCCTAAGGTCTTCAAGGGGTaGAAAGTTTTAACCTCGGGG +
Preference number: 4 (lower is better)
Translates to: CPSSPDPREGVETRHKDPKVFKG*KVLTSG
Trigger: CCCCGAGGTTAAAACTTTTCACCCCTTGAAGACCTT...AGGGTCTTTGTGCCTTGTCTCTACTCCCTCTCTTGGATCTGGGGAGGAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp GCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCAAGGTCTTCAAGGGGTaGAAAGTTTTAACCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AGDTPASGPNGSADSRCSKVFKG*KVLTSG
Trigger: CCCCGAGGTTAAAACTTTTCACCCCTTGAAGACCTT...GGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp GGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCAGAACAAAGTGTGACCTaGGGTCAACCTGCTCACATT +
Preference number: 4 (lower is better)
Translates to: GDTPASGPNGSADSRCSPEQSVT*GQPAHI
Trigger: AATGTGAGCAGGTTGACCTCAGGTCACACTTTGTTC...TGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp GATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCTTTTGGAACAAAGTGTaGCCTGAGGTCAACCTGCTC +
Preference number: 4 (lower is better)
Translates to: DQTLFTTGTWWARKIEGIFWNKV*PEVNLL
Trigger: GAGCAGGTTGACCTCAGGTCACACTTTGTTCCAAAA...GATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR GCA 90 bp CCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAAGCCAACTCCTTCATTaGCTTCTCGAACTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: PQVPMVLLTPDVPHSWDSSQLLH*LLELRS
Trigger: ACTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCT...TGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp ACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCCCTAAATCTTGTAGCTaGTGCATAAGATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: TLFTTGTWWARKIEGIQVPKSCS*CIRSST
Trigger: GGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGG...GACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR GCA 90 bp AATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCCATTCTCAAAGGCTCTaGCAGGAGAACTATAGAAAT +
Preference number: 4 (lower is better)
Translates to: NGMTEGSGQTSPAGDTPAHSQRL*QENYRN
Trigger: ATTTCTATAGTTCTCCTGGCAGAGCCTTTGAGAATG...GGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAAGGGCCCCAAAACAGTaGTACTCAAAGATGATCTGC +
Preference number: 4 (lower is better)
Translates to: LFTTGTWWARKIEGIQVKRAPKQ*YSKMIC
Trigger: GCAGATCATCTTTGAGTAGCACTGTTTTGGGGCCCT...TTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR GCA 90 bp TGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGGCTCTTCTTCCGACATaGTGGAGTTCCACTCTCCCT +
Preference number: 4 (lower is better)
Translates to: CVSHDQTLFTTGTWWARKALLPT*WSSTLP
Trigger: AGGGAGAGTGGAACTCCAGCATGTCGGAAGAAGAGC...CTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CCA 90 bp TTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGGGTAGAAGGGGGTGCTaGGGAGGGTTTGGCTTTATC +
Preference number: 4 (lower is better)
Translates to: FHMIRHCSPLAPGGPERLGRRGC*GGFGFI
Trigger: GATAAAGCCAAACCCTCCCCAGCACCCCCTTCTACC...CAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CCA 90 bp TTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGTCTCGAACTCCGCAGTaGCTTGGGAAGCCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: FHMIRHCSPLAPGGPERLSRTPQ*LGKPVH
Trigger: GTGAACTGGCTTCCCAAGCCACTGCGGAGTTCGAGA...CAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp CACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAGAAGTGAATTCTTGTTaGGAGGTCATATCACTGCCC +
Preference number: 4 (lower is better)
Translates to: HCSPLAPGGPERLRASRSEVNSC*EVISLP
Trigger: GGGCAGTGATATGACCTCCCAACAAGAATTCACTTC...TGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp GCCAGCTCTTTTGGAGGATGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCGCCCCTCCATGGCCTTaGTCAGCTCTTCTTCCGACA +
Preference number: 4 (lower is better)
Translates to: ASSFGGWPKSCSCCIRSSAPPWP*SALLPT
Trigger: TGTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGC...GCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAAACGAGCCTTTTGAGTaGTTTCACTGTCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: YGTILNGMTEGSGQTSPANEPFE*FHCLWG
Trigger: CCCCCACAGACAGTGAAACCACTCAAAAGGCTCGTT...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CCA 90 bp GAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCAACGAGCCTTTTGAGTaGTTTCACTGTCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ERLRASRSKLRPGGISPANEPFE*FHCLWG
Trigger: CCCCCACAGACAGTGAAACCACTCAAAAGGCTCGTT...GGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp CCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATACCACTGGCACCTGGTaGGCCCGAAAGATTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PDVPHSWDSERKTCCVSHTTGTW*ARKIEG
Trigger: GCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGT...ATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp ACCAGAGTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCGATGTTCCCCATAGCTaGGACTCAGAGAGGAAAACG +
Preference number: 4 (lower is better)
Translates to: TRVPTNICQPRSVDPLGADVPHS*DSERKT
Trigger: CGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATC...GGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTACTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp GATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCACCTTGCAGGTAGCTaGAACTTTGATAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: DQTLFTTGTWWARKIEGIHLAGS*NFDSGR
Trigger: TCTGCCACTATCAAAGTTCCAGCTACCTGCAAGGTG...GATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp TCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGAGGAAGGTCAGGGGCTaGGTTCACCCATATCACACA +
Preference number: 4 (lower is better)
Translates to: SHDQTLFTTGTWWARKIERKVRG*VHPYHT
Trigger: TGTGTGATATGGGTGAACCCAGCCCCTGACCTTCCT...CTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp ACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCGAGGTTAAAGAATTCTaGAAATTGGGGACTCAAATT +
Preference number: 4 (lower is better)
Translates to: TEGSGQTSPAGDTPASGPEVKEF*KLGTQI
Trigger: AATTTGAGTCCCCAATTTCCAGAATTCTTTAACCTC...GGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495624.1
3UTR CAA 72 bp ATCAATGGACTTAACCTACAGAACAGTCTGGCCAGTTaGGGTGCTGTCAAACTTGCCGGGTCGGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: INGLNLQNSLAS*GAVKLAGSAAH
Trigger: GTGTGCTGCCGACCCGGCAAGTTTGACAGCACCCAAACTGGCCAGACTGTTCTGTAGGTTAAGTCCATTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCACACATATTTTGCACATaGCGCTGTGCTGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: YGTILNGMTEGSGQTSPAHIFCT*RCAAPD
Trigger: ATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTG...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp CTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAATCAAAACGAGCCTTTTaGGTGGTTTCACTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LFTTGTWWARKIEGIQVKSKRAF*VVSLSV
Trigger: CACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGA...TTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp TCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGTCCCAATGGTTCTGCTaGCTCCAGATGTTCCCCATA +
Preference number: 4 (lower is better)
Translates to: SHDQTLFTTGTWWARKIESQWFC*LQMFPI
Trigger: TATGGGGAACATCTGGAGTCAGCAGAACCATTGGGA...CTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp CAGCTGGTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCATACTCAAGGGAACATaGGGAAAGATGGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: QLVWHNLEWDDRGQRADFILKGT*GKMAIQ
Trigger: CTGGATGGCCATCTTTCCTCATGTTCCCTTGAGTAT...GAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACATTTCCCAAATAGCCTaGGACCTTGAGAACATTTCC +
Preference number: 4 (lower is better)
Translates to: QTSPAGDTPASGPNGSADISQIA*DLENIS
Trigger: GGAAATGTTCTCAAGGTCTCAGGCTATTTGGGAAAT...GTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGTTCTGCATAATACTCTaGATGATGGGGAGGATGTTC +
Preference number: 4 (lower is better)
Translates to: QTLFTTGTWWARKIEGIQFCIIL*MMGRMF
Trigger: GAACATCCTCCCCATCATGCAGAGTATTATGCAGAA...CTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR GCA 90 bp CAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGAAATCTTGTAGCTGCTaGATAAGATCCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: QTLFTTGTWWARKIEGIQKSCSC*IRSSTI
Trigger: GATGGTGCTGGATCTTATGCAGCAGCTACAAGATTT...CTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR GCA 90 bp GATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCCTAAATCTTGTAGCTaGTGCATAAGATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: DQTLFTTGTWWARKIEGIPKSCS*CIRSST
Trigger: GGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGG...GATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR GCA 90 bp GTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAGGAAAGAAAGTGCATaGCCCAAAAGGGATGCCTTC +
Preference number: 4 (lower is better)
Translates to: VPMVLLTPDVPHSWDSERRKESA*PKRDAF
Trigger: GAAGGCATCCCTTTTGGGGCATGCACTTTCTTTCCT...CCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAATATTTATTATATTCTaGCCCATGGGGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HCSPLAPGGPERLRASRSIFIIF*PMGPCR
Trigger: CCTGCAAGGCCCCATGGGGCAGAATATAATAAATAT...TGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp GTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCGTGCTGGGGAGGGTTTaGCTTTATCGAAATCATCAA +
Preference number: 4 (lower is better)
Translates to: VWHNLEWDDRGQRADFSRVLGRV*LYRNHQ
Trigger: TTGATGATTTCGATAAAGCCAAACCCTCCCCAGCAC...GCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368072.10
CDS-3UTR CCA 90 bp TGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATGTGCTGGGGAGGGTTTaGCTTTATCGAAATCATCAA +
Preference number: 4 (lower is better)
Translates to: WWARKIEGIQVKVEARRHVLGRV*LYRNHQ
Trigger: TTGATGATTTCGATAAAGCCAAACCCTCCCCAGCAC...ATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CCA 90 bp CTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTGCTGGGGAGGGTTTaGCTTTATCGAAATCATCAA +
Preference number: 4 (lower is better)
Translates to: LFTTGTWWARKIEGIQVKVLGRV*LYRNHQ
Trigger: TTGATGATTTCGATAAAGCCAAACCCTCCCCAGCAC...TTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CCA 90 bp TGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCACCATCTCAAAACGAGCCTTTGGCAGTGTCTCCTaGCGATCTCTTCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: WPKSCSCCIRSSTISKRAFGSVS*RSLLGP
Trigger: GGGCCCCAGAAGAGATCGCCAGGAGACACTGCCAAA...GGCTCGTTTTGAGATGGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CCA 90 bp CTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAATGGAAAAACTTCTCTTaGGAAGCGAAGAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: LFTTGTWWARKIEGIQVKWKNFS*EAKRAS
Trigger: AGATGCCCTCTTCGCTTCCCAAGAGAAGTTTTTCCA...TTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp ACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCAGCCCCTCCATGGCCTTaGTCAGCTCTTCTTCCGACA +
Preference number: 4 (lower is better)
Translates to: TPDVPHSWDSERKTCCVSAPPWP*SALLPT
Trigger: TGTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGC...TGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp TGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATAGCTCTTTTGGAGGATaGCCTAAATCTTGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: WWARKIEGIQVKVEARRHSSFGG*PKSCSC
Trigger: GCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCT...ATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp CCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGACACTGTTCACCACTaGCACCTGGTGGGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: PDVPHSWDSERKTCCVSHDTVHH*HLVGPK
Trigger: TTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTC...ATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTCTTCTTCCGACATGCTaGAGTTCCACTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VSHDQTLFTTGTWWARKILLPTC*SSTLPA
Trigger: TGCAGGGAGAGTGGAACTCCAGCATGTCGGAAGAAG...AATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR TCA 90 bp GTATCAGTTCTGCTAGGGTCTTCAGAGAGACCGAGGGCCCCAAAACAGTGCTACTGTGATCTCCTTCAGTaGTGGGTACAGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: VSVLLGSSERPRAPKQCYCDLLQ*WVQHIL
Trigger: AAGGATGTGCTGTACCCATCACTGAAGGAGATCACA...GTAGCACTGTTTTGGGGCCCTCGGTCTCTCTGAAGACCCTAGCAGAACTGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCACTGGATACTTTTCTGTaGTCTCCTTCAGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: YGTILNGMTEGSGQTSPALDTFL*SPSVMG
Trigger: ACCCATCACTGAAGGAGATCACAGAAAAGTATCCAG...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp ACCAGAGTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCACGCTGTGCTGCTCCTaGTATTTTTCAAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: TRVPTNICQPRSVDPLGATLCCS*YFSNCS
Trigger: AGAGCAGTTTGAAAAATATCAGGAGCAGCACAGCGT...GGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTACTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp ACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCAGTGGGCCCGAAAGATTaGGGGCATCCAGGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: TPDVPHSWDSERKTCCVSVGPKD*GHPGQS
Trigger: ACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCAC...TGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp CCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGTGTTGTGTTTCACATaGTCAGACACTGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: PQVPMVLLTPDVPHSWDSVLCFT*SDTVHH
Trigger: GTGGTGAACAGTGTCTGATCATGTGAAACACAACAC...TGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp AAGAAAGTGCATGCCCCAAAAGGGATGCCTTCCTTCACCTTGCAGGTAGCTGGATCCCAATGGTTCTGCTaGCTCCAGATGTTCCCCATA +
Preference number: 4 (lower is better)
Translates to: KKVHAPKGMPSFTLQVAGSQWFC*LQMFPI
Trigger: TATGGGGAACATCTGGAGTCAGCAGAACCATTGGGA...TCCAGCTACCTGCAAGGTGAAGGAAGGCATCCCTTTTGGGGCATGCACTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp GTATCAGTTCTGCTAGGGTCTTCAGAGAGACCGAGGGCCCCAAAACAGTGCTACTCCAAGCTACTTTCCTaGACCAAGGGACAGGATTCT +
Preference number: 4 (lower is better)
Translates to: VSVLLGSSERPRAPKQCYSKLLS*TKGQDS
Trigger: AGAATCCTGTCCCTTGGTTCAGGAAAGTAGCTTGGA...GTAGCACTGTTTTGGGGCCCTCGGTCTCTCTGAAGACCCTAGCAGAACTGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp GTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCACAGAATCCAAGCTACTTTCCTaGACCAAGGGACAGGATTCT +
Preference number: 4 (lower is better)
Translates to: VPTNICQPRSVDPLGATESKLLS*TKGQDS
Trigger: AGAATCCTGTCCCTTGGTTCAGGAAAGTAGCTTGGA...TTCTGTGGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp TCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGAAAGGGCTTTCTACATTaGAATACTCAAGGGAACATG +
Preference number: 4 (lower is better)
Translates to: SPAGDTPASGPNGSADSRKGFLH*NTQGNM
Trigger: CATGTTCCCTTGAGTATTTCAATGTAGAAAGCCCTT...TCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp GTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTGAGAGACTTATCTTCTaGGTGAACCAGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: VLLTPDVPHSWDSERKTCERLIF*VNQDSQ
Trigger: CTGGCTGTCCTGGTTCACTCAGAAGATAAGTCTCTC...ACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGACACTGAAGCCCCATaGCTATATCACAAGTATACC +
Preference number: 4 (lower is better)
Translates to: YGTILNGMTEGSGQTSPADTEAP*LYHKYT
Trigger: GGTATACTTGTGATATAGTCATGGGGCTTCAGTGTC...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp TTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGCCAACTCCTTCATTaGCTTCTCGAACTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: FHMIRHCSPLAPGGPERLSQLLH*LLELRS
Trigger: ACTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCT...CAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR GCA 90 bp AAGAAAGTGCATGCCCCAAAAGGGATGCCTTCCTTCACCTTGCAGGTAGCTGGAGCTCTTCTTCCGACATaGTGGAGTTCTGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KKVHAPKGMPSFTLQVAGALLPT*WSSEGQ
Trigger: CTGACCTTCAGAACTCCAGCATGTCGGAAGAAGAGC...TCCAGCTACCTGCAAGGTGAAGGAAGGCATCCCTTTTGGGGCATGCACTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp AGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTTGGAGAGTAGGTTCTaGATAATACTCTGCATGATG +
Preference number: 4 (lower is better)
Translates to: RHCSPLAPGGPERLRASRLESRF*IILCMM
Trigger: CATCATGCAGAGTATTATGCAGAACCTACTCTCCAA...CCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR GCA 90 bp GGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCAGACCTGAGGTCAACCTaGTCACATTCAATCAAAATC +
Preference number: 4 (lower is better)
Translates to: GDTPASGPNGSADSRCSPDLRST*SHSIKI
Trigger: GATTTTGATTGAATGTGAGCAGGTTGACCTCAGGTC...TGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp ATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCTTTGGCAGTGTCTCCTaGCGATCTCTTCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: MFPIAGTQRGKRVVFHMIFGSVS*RSLLGP
Trigger: GGGCCCCAGAAGAGATCGCCAGGAGACACTGCCAAA...GATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CCA 90 bp CAGACCCTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCCGAAGAGGGCATCTTTaGCAGTGTCTCCTGGCGATC +
Preference number: 4 (lower is better)
Translates to: QTLFLERQRKNLSWYGTIRRGHL*QCLLAI
Trigger: GATCGCCAGGAGACACTGCCAAAGATGCCCTCTTCG...GATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAGGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368072.10
CDS-3UTR CCA 90 bp TGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCACCATCTCAAAACGAGCCTCTCGAACTCCGCAGTaGCTTGGGAAGCCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: WPKSCSCCIRSSTISKRASRTPQ*LGKPVH
Trigger: GTGAACTGGCTTCCCAAGCCACTGCGGAGTTCGAGA...GGCTCGTTTTGAGATGGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp GTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGAACTGCTCCACCAGGTaGGGTTCTTCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: VPHSWDSERKTCCVSHDQNCSTR*GSSSAN
Trigger: GTTGGCTGAGGAAGAACCCCACCTGGTGGAGCAGTT...CTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp CCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGCCTCTGAGAGCTTTTaGAACTGCTCCACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PDVPHSWDSERKTCCVSHASESF*NCSTRW
Trigger: CCACCTGGTGGAGCAGTTCCAAAAGCTCTCAGAGGC...ATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp TGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCACCATCTCAAAACGAGCCTGCCTAGCCCCTCCATaGCCTTGGTCAGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: WPKSCSCCIRSSTISKRACLAPP*PWSALL
Trigger: AAGAAGAGCTGACCAAGGCCATGGAGGGGCTAGGCA...GGCTCGTTTTGAGATGGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp GTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGTTCACCACTGGCACCTaGTGGGCCCGAAAGATTGAG +
Preference number: 4 (lower is better)
Translates to: VPHSWDSERKTCCVSHDQFTTGT*WARKIE
Trigger: CTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAA...CTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGATGTTCCCCATAGCTaGGACTCAGAGAGGAAAACG +
Preference number: 4 (lower is better)
Translates to: VSHDQTLFTTGTWWARKIDVPHS*DSERKT
Trigger: CGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATC...AATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp GTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTGTGCAGACTGAGTTGTaGAAGGTGGGTGTTGATGGA +
Preference number: 4 (lower is better)
Translates to: VLLTPDVPHSWDSERKTCVQTEL*KVGVDG
Trigger: TCCATCAACACCCACCTTCCACAACTCAGTCTGCAC...ACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp GTATCAGTTCTGCTAGGGTCTTCAGAGAGACCGAGGGCCCCAAAACAGTGCTACGAACATGAGGAAAGATaGCCATCCAGTCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: VSVLLGSSERPRAPKQCYEHEER*PSSLLC
Trigger: GCAAAGGAGACTGGATGGCCATCTTTCCTCATGTTC...GTAGCACTGTTTTGGGGCCCTCGGTCTCTCTGAAGACCCTAGCAGAACTGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp TGCCCCTCCTCCCCAGATCCAAGAGAGGGAGTAGAGACAAGGCACAAAGACCCTTTTTACATTCAGATCTaGGCTCTTCCATGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CPSSPDPREGVETRHKDPFYIQI*ALPCSG
Trigger: ACCAGAGCATGGAAGAGCCCAGATCTGAATGTAAAA...AGGGTCTTTGTGCCTTGTCTCTACTCCCTCTCTTGGATCTGGGGAGGAGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACCTTCTTCCGACATGCTaGAGTTCCACTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LQMFPIAGTQRGKRVVFHLLPTC*SSTLPA
Trigger: TGCAGGGAGAGTGGAACTCCAGCATGTCGGAAGAAG...GTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
3UTR CAA 72 bp AGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTaGAATGGGATGACAGAGGGCAGCGGGCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: RQRKNLSWYGTI*NGMTEGSGQTS
Trigger: AGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CAA 72 bp ATCCAGTCTCCTTTGCCAACTGAGGTGCAGACTGAGTaGTGGAAGGTGGGTGTTGATGGAACCCAGCATTAC +
Preference number: 4 (lower is better)
Translates to: IQSPLPTEVQTE*WKVGVDGTQHY
Trigger: GTAATGCTGGGTTCCATCAACACCCACCTTCCACAACTCAGTCTGCACCTCAGTTGGCAAAGGAGACTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp TCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGCTGGATACTTTTCTGTaGTCTCCTTCAGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: SHDQTLFTTGTWWARKIELDTFL*SPSVMG
Trigger: ACCCATCACTGAAGGAGATCACAGAAAAGTATCCAG...CTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp TGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGACGCTGTGCTGCTCCTaGTATTTTTCAAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: CVSHDQTLFTTGTWWARKTLCCS*YFSNCS
Trigger: AGAGCAGTTTGAAAAATATCAGGAGCAGCACAGCGT...CTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp TGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGGTGTTGTGTTTCACATaGTCAGACACTGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: CVSHDQTLFTTGTWWARKVLCFT*SDTVHH
Trigger: GTGGTGAACAGTGTCTGATCATGTGAAACACAACAC...CTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp TCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGTGTTGTGTTTCACATaGTCAGACACTGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: SHDQTLFTTGTWWARKIEVLCFT*SDTVHH
Trigger: GTGGTGAACAGTGTCTGATCATGTGAAACACAACAC...CTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp CTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAATTCTTTATCACAGCTTaGGCTCAAAAAGGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LFTTGTWWARKIEGIQVKFFITA*AQKGWD
Trigger: ATCCCAACCTTTTTGAGCTCAAGCTGTGATAAAGAA...TTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR TCA 90 bp GCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCCAAGTTCTCTGGAAGTaGAACTCAAATAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: ARKIEGIQVKVEARRHLSQVLWK*NSNRRE
Trigger: TTCTCTCCTATTTGAGTTTCACTTCCAGAGAACTTG...GGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR TCA 90 bp CAGCTGGTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCGTGACACATTCTTGCTaGAGAACAAGTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QLVWHNLEWDDRGQRADFVTHSC*RTSSLE
Trigger: TTCCAGAGAACTTGTTCTTCAGCAAGAATGTGTCAC...GAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CAGACCCTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCGAGAGCTTTTGGAACTaGTCCACCAGGTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QTLFLERQRKNLSWYGTIESFWN*STRWGS
Trigger: AGAACCCCACCTGGTGGAGCAGTTCCAAAAGCTCTC...GATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAGGGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CCAGGACAGCCAGCTGAGCTGACCAGAGTACCTACCAACATATGTCAGCCAAGGTTCTGCATAATACTCTaGATGATGGGGAGGATGTTC +
Preference number: 4 (lower is better)
Translates to: PGQPAELTRVPTNICQPRFCIIL*MMGRMF
Trigger: GAACATCCTCCCCATCATGCAGAGTATTATGCAGAA...CCTTGGCTGACATATGTTGGTAGGTACTCTGGTCAGCTCAGCTGGCTGTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAATTGGAGAGTAGGTTCTaGATAATACTCTGCATGATG +
Preference number: 4 (lower is better)
Translates to: LFTTGTWWARKIEGIQVKLESRF*IILCMM
Trigger: CATCATGCAGAGTATTATGCAGAACCTACTCTCCAA...TTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR GCA 90 bp GTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAATCTTGTAGCTGCTaGATAAGATCCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: VPMVLLTPDVPHSWDSERKSCSC*IRSSTI
Trigger: GATGGTGCTGGATCTTATGCAGCAGCTACAAGATTT...CCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR GCA 90 bp GTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCACAGAACCTAAATCTTGTAGCTaGTGCATAAGATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: VPTNICQPRSVDPLGATEPKSCS*CIRSST
Trigger: GGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGG...TTCTGTGGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp GTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGATGCCCCAAAAGGGATaGCTTCCTTCACCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VPHSWDSERKTCCVSHDQMPQKG*LPSPCR
Trigger: CCTGCAAGGTGAAGGAAGGCATCCCTTTTGGGGCAT...CTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR GCA 90 bp CCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGACCTGAGGTCAACCTaGTCACATTCAATCAAAATC +
Preference number: 4 (lower is better)
Translates to: PQVPMVLLTPDVPHSWDSDLRST*SHSIKI
Trigger: GATTTTGATTGAATGTGAGCAGGTTGACCTCAGGTC...TGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp TCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGAGCTCTTTTGGAGGATaGCCTAAATCTTGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SHDQTLFTTGTWWARKIESSFGG*PKSCSC
Trigger: GCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCT...CTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp TTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGATTCACCACTGGCACCTaGTGGGCCCGAAAGATTGAG +
Preference number: 4 (lower is better)
Translates to: FPIAGTQRGKRVVFHMIRFTTGT*WARKIE
Trigger: CTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAA...TCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp AGCTCTTTTGGAGGATGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCACCTGGCACAATCTTGAATaGGATGACAGAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SSFGGWPKSCSCCIRSSTWHNLE*DDRGQR
Trigger: CCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCA...GGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp TGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGAAGCCAGAATGTATCTaGGGAAGAATAGCCATTAAT +
Preference number: 4 (lower is better)
Translates to: WHNLEWDDRGQRADFSRRKPECI*GRIAIN
Trigger: ATTAATGGCTATTCTTCCCCAGATACATTCTGGCTT...CCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGCATGTGAATTTGCTTTaGAGAGACTTATCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QTLFTTGTWWARKIEGIQHVNLL*RDLSSE
Trigger: CTCAGAAGATAAGTCTCTCCAAAGCAAATTCACATG...CTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp CAGCTGGTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTTTTACATTCAGATCTaGGCTCTTCCATGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QLVWHNLEWDDRGQRADFFYIQI*ALPCSG
Trigger: ACCAGAGCATGGAAGAGCCCAGATCTGAATGTAAAA...GAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATACCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTGTCCAGTTTTTGGCTaGAGCTTTAAGGAGAAAATA +
Preference number: 4 (lower is better)
Translates to: QTSPAGDTPASGPNGSADCPVFG*SFKEKI
Trigger: TATTTTCTCCTTAAAGCTCCAGCCAAAAACTGGACA...GTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CAA 72 bp AAAGTGCATGCCCCAAAAGGGATGCCTTCCTTCACCTaGCAGGTAGCTGGAACTTTGATAGTGGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: KVHAPKGMPSFT*QVAGTLIVAET
Trigger: GGTTTCTGCCACTATCAAAGTTCCAGCTACCTGCAAGGTGAAGGAAGGCATCCCTTTTGGGGCATGCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp TGCCTCAAACTGCTCACATATTTTGCACATGACGCTGTGCTGCTCCTGATATTTTCTCCCTGCAGCCTCTaGGAGCTTTTGGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: CLKLLTYFAHDAVLLLIFSPCSL*ELLELL
Trigger: GAGCAGTTCCAAAAGCTCTCAGAGGCTGCAGGGAGA...AAATATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTTTGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR TCA 90 bp CATAAGATCCAGCACCATCTCAAAACGAGCCTTTTGAGTGGTTTCACTGTCTGTTCTCCCTGCAGCCTCTaGGAGCTTTTGGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: HKIQHHLKTSLLSGFTVCSPCSL*ELLELL
Trigger: GAGCAGTTCCAAAAGCTCTCAGAGGCTGCAGGGAGA...ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAGATGGTGCTGGATCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR TCA 90 bp CCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGACAGGTAGAGATTCCCGATaGCTCTGCAACCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: PHSWDSERKTCCVSHDQTGRDSR*LCNHSG
Trigger: TCCAGAATGGTTGCAGAGTCATCGGGAATCTCTACC...TGTCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp CCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGGTAGAGATTCCCGATaGCTCTGCAACCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: PDVPHSWDSERKTCCVSHGRDSR*LCNHSG
Trigger: TCCAGAATGGTTGCAGAGTCATCGGGAATCTCTACC...ATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp GTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTGTGTTGTGTTTCACATaGTCAGACACTGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: VLLTPDVPHSWDSERKTCVLCFT*SDTVHH
Trigger: GTGGTGAACAGTGTCTGATCATGTGAAACACAACAC...ACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368072.10
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp CCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATTCCCAATGGTTCTGCTaGCTCCAGATGTTCCCCATA +
Preference number: 4 (lower is better)
Translates to: PDVPHSWDSERKTCCVSHSQWFC*LQMFPI
Trigger: TATGGGGAACATCTGGAGTCAGCAGAACCATTGGGA...ATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp GAAAGATGGCCATCCAGTCTCCTTTGCCAACTGAGGTGCAGACTGAGTTGTGGAGCAACTTACGGAAGCTaGGGAAGATCAGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: ERWPSSLLCQLRCRLSCGATYGS*GRSEKD
Trigger: GTCTTTTTCTGATCTTCCTCAGCTTCCGTAAGTTGC...TCCACAACTCAGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGGCCATCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp ACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCAGTGGAAGGTGGGTGTTaGTGGAACCCAGCATTACAA +
Preference number: 4 (lower is better)
Translates to: TPDVPHSWDSERKTCCVSVEGGC*WNPALQ
Trigger: TTGTAATGCTGGGTTCCATCAACACCCACCTTCCAC...TGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR GCA 90 bp GTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGAGCCAACTCCTTCATTaGCTTCTCGAACTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: VPHSWDSERKTCCVSHDQSQLLH*LLELRS
Trigger: ACTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCT...CTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR GCA 90 bp GTTGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAATTCTGCATAATACTCTaGATGATGGGGAGGATGTTC +
Preference number: 4 (lower is better)
Translates to: VVFHMIRHCSPLAPGGPEFCIIL*MMGRMF
Trigger: GAACATCCTCCCCATCATGCAGAGTATTATGCAGAA...TTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR GCA 90 bp TGTGTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGGTCTCTGCCTCAAACTaGTCACATATTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: CVSHDQTLFTTGTWWARKVSASN*SHILHM
Trigger: CATGTGCAAAATATGTGAGCAGTTTGAGGCAGAGAC...CTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR GCA 90 bp TTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGAGCTCTTCTTCCGACATaGTGGAGTTCCACTCTCCCT +
Preference number: 4 (lower is better)
Translates to: FPIAGTQRGKRVVFHMIRALLPT*WSSTLP
Trigger: AGGGAGAGTGGAACTCCAGCATGTCGGAAGAAGAGC...TCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CCA 90 bp GTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGGAAAAACTTCTCTTaGGAAGCGAAGAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: VLLTPDVPHSWDSERKTCWKNFS*EAKRAS
Trigger: AGATGCCCTCTTCGCTTCCCAAGAGAAGTTTTTCCA...ACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000462644.5
ENST00000472750.5
CDS-3UTR CCA 90 bp CATAAGATCCAGCACCATCTCAAAACGAGCCTTTTGAGTGGTTTCACTGTCTGTAACTGCTCCACCAGGTaGGGTTCTTCCTCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: HKIQHHLKTSLLSGFTVCNCSTR*GSSSAN
Trigger: GTTGGCTGAGGAAGAACCCCACCTGGTGGAGCAGTT...ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAGATGGTGCTGGATCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp TGCCTCAAACTGCTCACATATTTTGCACATGACGCTGTGCTGCTCCTGATATTTGCCTCTGAGAGCTTTTaGAACTGCTCCACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CLKLLTYFAHDAVLLLIFASESF*NCSTRW
Trigger: CCACCTGGTGGAGCAGTTCCAAAAGCTCTCAGAGGC...AAATATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTTTGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp GGCTGGAGCTTTAAGGAGAAAATAGTGACACTGAAGCCCCATGACTATATCACATGCCTAGCCCCTCCATaGCCTTGGTCAGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GWSFKEKIVTLKPHDYITCLAPP*PWSALL
Trigger: AAGAAGAGCTGACCAAGGCCATGGAGGGGCTAGGCA...TGTGATATAGTCATGGGGCTTCAGTGTCACTATTTTCTCCTTAAAGCTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp GTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGACTCTGCAACCATTCTaGATACTTTTCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: VPMVLLTPDVPHSWDSERTLQPF*ILFCDL
Trigger: GAGATCACAGAAAAGTATCCAGAATGGTTGCAGAGT...CCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CCA 90 bp TGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCACCATCTCAAAACGAGCCAACGAGCCTTTTGAGTaGTTTCACTGTCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WPKSCSCCIRSSTISKRANEPFE*FHCLWG
Trigger: CCCCCACAGACAGTGAAACCACTCAAAAGGCTCGTT...GGCTCGTTTTGAGATGGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp GGAGTAGGGTTCACAGAAATGGCCTGTGAAACAGACCCTATTCCTAGAGAGACAGATGTTCCCCATAGCTaGGACTCAGAGAGGAAAACG +
Preference number: 4 (lower is better)
Translates to: GVGFTEMACETDPIPRETDVPHS*DSERKT
Trigger: CGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATC...TGTCTCTCTAGGAATAGGGTCTGTTTCACAGGCCATTTCTGTGAACCCTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATGTTCCCCATAGCTaGGACTCAGAGAGGAAAACG +
Preference number: 4 (lower is better)
Translates to: PDVPHSWDSERKTCCVSHDVPHS*DSERKT
Trigger: CGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATC...ATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp GTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCACAGAAAAACCTCAGCTGGTATaGCACAATCTTGAATGGGAT +
Preference number: 4 (lower is better)
Translates to: VPTNICQPRSVDPLGATEKPQLV*HNLEWD
Trigger: ATCCCATTCAAGATTGTGCCATACCAGCTGAGGTTT...TTCTGTGGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATTTATATTCTGCCCCATaGGGCCTTGCAGGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: PDVPHSWDSERKTCCVSHLYSAP*GLAGKG
Trigger: CCCTTTTCCTGCAAGGCCCCATGGGGCAGAATATAA...ATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp TGCCCCTCCTCCCCAGATCCAAGAGAGGGAGTAGAGACAAGGCACAAAGACCCTCTCCACCACAAGTCCTaGAATAATTCCAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: CPSSPDPREGVETRHKDPLHHKS*NNSKSF
Trigger: AAAACTTTTGGAATTATTCCAGGACTTGTGGTGGAG...AGGGTCTTTGTGCCTTGTCTCTACTCCCTCTCTTGGATCTGGGGAGGAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGACATGTGATCTCCTTCAGTaGTGGGTACAGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: PHSWDSERKTCCVSHDQTCDLLQ*WVQHIL
Trigger: AAGGATGTGCTGTACCCATCACTGAAGGAGATCACA...TGTCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp TGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCACCATCTCAAAACGAGCCCACATATTTTGCACATaGCGCTGTGCTGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: WPKSCSCCIRSSTISKRAHIFCT*RCAAPD
Trigger: ATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTG...GGCTCGTTTTGAGATGGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR TCA 90 bp CCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATCACATATTTTGCACATaGCGCTGTGCTGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PDVPHSWDSERKTCCVSHHIFCT*RCAAPD
Trigger: ATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTG...ATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp CTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACAATAGCCTGAGACCTTaGGAACATTTCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LQMFPIAGTQRGKRVVFHNSLRP*EHFLPH
Trigger: GTGAGGAAGGAAATGTTCTCAAGGTCTCAGGCTATT...GTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR TCA 90 bp CTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACGACACTGAAGCCCCATaGCTATATCACAAGTATACC +
Preference number: 4 (lower is better)
Translates to: LQMFPIAGTQRGKRVVFHDTEAP*LYHKYT
Trigger: GGTATACTTGTGATATAGTCATGGGGCTTCAGTGTC...GTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR TCA 90 bp GTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTGTGACACATTCTTGCTaGAGAACAAGTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VLLTPDVPHSWDSERKTCVTHSC*RTSSLE
Trigger: TTCCAGAGAACTTGTTCTTCAGCAAGAATGTGTCAC...ACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp TTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGTTCTGCATAATACTCTaGATGATGGGGAGGATGTTC +
Preference number: 4 (lower is better)
Translates to: FHMIRHCSPLAPGGPERLFCIIL*MMGRMF
Trigger: GAACATCCTCCCCATCATGCAGAGTATTATGCAGAA...CAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR GCA 90 bp GTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTGTCTCTGCCTCAAACTaGTCACATATTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: VLLTPDVPHSWDSERKTCVSASN*SHILHM
Trigger: CATGTGCAAAATATGTGAGCAGTTTGAGGCAGAGAC...ACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368072.10
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
CDS-3UTR GCA 90 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGTCTCTGCCTCAAACTaGTCACATATTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: VSHDQTLFTTGTWWARKIVSASN*SHILHM
Trigger: CATGTGCAAAATATGTGAGCAGTTTGAGGCAGAGAC...AATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp GCCAGCTCTTTTGGAGGATGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCAGCTCTTTTGGAGGATaGCCTAAATCTTGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASSFGGWPKSCSCCIRSSSSFGG*PKSCSC
Trigger: GCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCT...GCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp ACTGGTAGGACAGAAGGCACAAGGTTCATAGAGAAGGGCTCTTTTGTTCTTCCCCACCTTGCAGGTAGCTaGAACTTTGATAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TGRTEGTRFIEKGSFVLPHLAGS*NFDSGR
Trigger: TCTGCCACTATCAAAGTTCCAGCTACCTGCAAGGTG...GGGAAGAACAAAAGAGCCCTTCTCTATGAACCTTGTGCCTTCTGTCCTACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CCAGGACAGCCAGCTGAGCTGACCAGAGTACCTACCAACATATGTCAGCCAAGGCTCCACCACAAGTCCTaGAATAATTCCAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: PGQPAELTRVPTNICQPRLHHKS*NNSKSF
Trigger: AAAACTTTTGGAATTATTCCAGGACTTGTGGTGGAG...CCTTGGCTGACATATGTTGGTAGGTACTCTGGTCAGCTCAGCTGGCTGTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp GTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAATTTTCACCTTAGGTaGAATCCTGAGAGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: VPMVLLTPDVPHSWDSERNFHLR*NPERLK
Trigger: CTTTAACCTCTCAGGATTCCACCTAAGGTGAAAATT...CCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495624.1
CDS-3UTR TCA 90 bp ATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCTGTGATCTCCTTCAGTaGTGGGTACAGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: MFPIAGTQRGKRVVFHMICDLLQ*WVQHIL
Trigger: AAGGATGTGCTGTACCCATCACTGAAGGAGATCACA...GATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp ACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACTGGATACTTTTCTGTaGTCTCCTTCAGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: TPDVPHSWDSERKTCCVSLDTFL*SPSVMG
Trigger: ACCCATCACTGAAGGAGATCACAGAAAAGTATCCAG...TGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR TCA 90 bp AGCTCTTTTGGAGGATGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCACCGTGTTGTGTTTCACATaGTCAGACACTGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: SSFGGWPKSCSCCIRSSTVLCFT*SDTVHH
Trigger: GTGGTGAACAGTGTCTGATCATGTGAAACACAACAC...GGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR TCA 90 bp TTTTTCCATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCAGCAGGGTAACCATTTaGGTTCTCAGCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: FFHLWQNRDVLHSDLGSSSRVTI*VLSLEQ
Trigger: CTGTTCCAGGCTGAGAACTCAAATGGTTACCCTGCT...GGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGATGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp ATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCATGCTCTATACTCAAGGGAACATaGGGAAAGATGGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: ISGRTETFYIQIWALPCSILKGT*GKMAIQ
Trigger: CTGGATGGCCATCTTTCCTCATGTTCCCTTGAGTAT...AGAGCATGGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CAGACCCTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCAATAGCCTGAGACCTTaGGAACATTTCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: QTLFLERQRKNLSWYGTINSLRP*EHFLPH
Trigger: GTGAGGAAGGAAATGTTCTCAAGGTCTCAGGCTATT...GATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAGGGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CATAAGATCCAGCACCATCTCAAAACGAGCCTTTTGAGTGGTTTCACTGTCTGTAGCCAACTCCTTCATTaGCTTCTCGAACTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: HKIQHHLKTSLLSGFTVCSQLLH*LLELRS
Trigger: ACTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCT...ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAGATGGTGCTGGATCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR GCA 90 bp CCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGACACCTAAATCTTGTAGCTaGTGCATAAGATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PHSWDSERKTCCVSHDQTPKSCS*CIRSST
Trigger: GGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGG...TGTCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR GCA 90 bp AAGAAAGTGCATGCCCCAAAAGGGATGCCTTCCTTCACCTTGCAGGTAGCTGGACATTCTCAAAGGCTCTaGCAGGAGAACTATAGAAAT +
Preference number: 4 (lower is better)
Translates to: KKVHAPKGMPSFTLQVAGHSQRL*QENYRN
Trigger: ATTTCTATAGTTCTCCTGGCAGAGCCTTTGAGAATG...TCCAGCTACCTGCAAGGTGAAGGAAGGCATCCCTTTTGGGGCATGCACTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCATCTATTGTGATTAGATaGAAAAGCCCTTTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: YGTILNGMTEGSGQTSPASIVIR*KSPFPL
Trigger: TAAAGGGAAAGGGCTTTTGCATCTAATCACAATAGA...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp TGCCAGGAAGACGGGGAGTCAGTGAGAATCGTAAATGGACTAGATGAGGGGAAATACTCAAAGATGATCTaGAGACTTGTGCTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CQEDGESVRIVNGLDEGKYSKMI*RLVLVS
Trigger: ACTGACCAGCACAAGTCTGCAGATCATCTTTGAGTA...TTTCCCCTCATCTAGTCCATTTACGATTCTCACTGACTCCCCGTCTTCCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp ATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCATGCTCTAGGGCCCCAAAACAGTaGTACTCAAAGATGATCTGC +
Preference number: 4 (lower is better)
Translates to: ISGRTETFYIQIWALPCSRAPKQ*YSKMIC
Trigger: GCAGATCATCTTTGAGTAGCACTGTTTTGGGGCCCT...AGAGCATGGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CAGACCCTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCGAAGTGAATTCTTGTTaGGAGGTCATATCACTGCCC +
Preference number: 4 (lower is better)
Translates to: QTLFLERQRKNLSWYGTIEVNSC*EVISLP
Trigger: GGGCAGTGATATGACCTCCCAACAAGAATTCACTTC...GATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAGGGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CATAAGATCCAGCACCATCTCAAAACGAGCCTTTTGAGTGGTTTCACTGTCTGTCTTCTTCCGACATGCTaGAGTTCTGAAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: HKIQHHLKTSLLSGFTVCLLPTC*SSEGQW
Trigger: CCACTGACCTTCAGAACTCCAGCATGTCGGAAGAAG...ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAGATGGTGCTGGATCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp CTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTTGAATAGGAAGGTCAGGGGCTaGGTTCACCCATATCACACA +
Preference number: 4 (lower is better)
Translates to: LFLERQRKNLSWYGTILNRKVRG*VHPYHT
Trigger: TGTGTGATATGGGTGAACCCAGCCCCTGACCTTCCT...ATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp GTATCAGTTCTGCTAGGGTCTTCAGAGAGACCGAGGGCCCCAAAACAGTGCTACCATGTGAATTTGCTTTaGAGAGACTTATCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VSVLLGSSERPRAPKQCYHVNLL*RDLSSE
Trigger: CTCAGAAGATAAGTCTCTCCAAAGCAAATTCACATG...GTAGCACTGTTTTGGGGCCCTCGGTCTCTCTGAAGACCCTAGCAGAACTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGACAGAGCACCAGACTCCATaGTACGGCATTAAACTATCT +
Preference number: 4 (lower is better)
Translates to: PHSWDSERKTCCVSHDQTEHQTP*YGIKLS
Trigger: AGATAGTTTAATGCCGTACCATGGAGTCTGGTGCTC...TGTCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462644.5
CDS-3UTR TCA 90 bp TTTTTCCATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCCACATATTTTGCACATaGCGCTGTGCTGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: FFHLWQNRDVLHSDLGSSHIFCT*RCAAPD
Trigger: ATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTG...GGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGATGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCGACAGCCAGCTGAGCTaGCCAGAGTACCTACCAACA +
Preference number: 4 (lower is better)
Translates to: PRDRILRESCISNKPECIDSQLS*PEYLPT
Trigger: TGTTGGTAGGTACTCTGGTCAGCTCAGCTGGCTGTC...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTTGAATGAGAGACTTATCTTCTaGGTGAACCAGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LFLERQRKNLSWYGTILNERLIF*VNQDSQ
Trigger: CTGGCTGTCCTGGTTCACTCAGAAGATAAGTCTCTC...ATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp TTTTTCCATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCGAACAAAGTGTGACCTaGGGTCAACCTGCTCACATT +
Preference number: 4 (lower is better)
Translates to: FFHLWQNRDVLHSDLGSSEQSVT*GQPAHI
Trigger: AATGTGAGCAGGTTGACCTCAGGTCACACTTTGTTC...GGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGATGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp TGCCAGGAAGACGGGGAGTCAGTGAGAATCGTAAATGGACTAGATGAGGGGAAATTGGAGAGTAGGTTCTaGATAATACTCTGCATGATG +
Preference number: 4 (lower is better)
Translates to: CQEDGESVRIVNGLDEGKLESRF*IILCMM
Trigger: CATCATGCAGAGTATTATGCAGAACCTACTCTCCAA...TTTCCCCTCATCTAGTCCATTTACGATTCTCACTGACTCCCCGTCTTCCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp CAGACCCTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCAAATCTTGTAGCTGCTaGATAAGATCCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: QTLFLERQRKNLSWYGTIKSCSC*IRSSTI
Trigger: GATGGTGCTGGATCTTATGCAGCAGCTACAAGATTT...GATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAGGGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp AAGATCCAGCACCATCTCAAAACGAGCCTTTTGAGTGGTTTCACTGTCTGTGGGTACTCAAAGATGATCTaGAGACTTGTGCTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: KIQHHLKTSLLSGFTVCGYSKMI*RLVLVS
Trigger: ACTGACCAGCACAAGTCTGCAGATCATCTTTGAGTA...CCCACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAGATGGTGCTGGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCTCTCGAACTCCGCAGTaGCTTGGGAAGCCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: PRDRILRESCISNKPECISRTPQ*LGKPVH
Trigger: GTGAACTGGCTTCCCAAGCCACTGCGGAGTTCGAGA...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp TTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGAAGCTCTTTTGGAGGATaGCCTAAATCTTGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: FPIAGTQRGKRVVFHMIRSSFGG*PKSCSC
Trigger: GCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCT...TCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp TGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCACCATCTCAAAACGAGCCAAACCTCAGCTGGTATaGCACAATCTTGAATGGGAT +
Preference number: 4 (lower is better)
Translates to: WPKSCSCCIRSSTISKRAKPQLV*HNLEWD
Trigger: ATCCCATTCAAGATTGTGCCATACCAGCTGAGGTTT...GGCTCGTTTTGAGATGGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp CTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTTGAATGTGCAGACTGAGTTGTaGAAGGTGGGTGTTGATGGA +
Preference number: 4 (lower is better)
Translates to: LFLERQRKNLSWYGTILNVQTEL*KVGVDG
Trigger: TCCATCAACACCCACCTTCCACAACTCAGTCTGCAC...ATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
3UTR CAA 72 bp TCTGTGATCTCCTTCAGTGATGGGTACAGCACATCCTaGGAGAGTAGGTTCTGCATAATACTCTGCATGATG +
Preference number: 4 (lower is better)
Translates to: SVISFSDGYSTS*ESRFCIILCMM
Trigger: CATCATGCAGAGTATTATGCAGAACCTACTCTCCAAGGATGTGCTGTACCCATCACTGAAGGAGATCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR TCA 90 bp CTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTTGAATGACATGCTGGAGTTCTaGAGGTCAGTGGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: LFLERQRKNLSWYGTILNDMLEF*RSVAFL
Trigger: CAAAAATGCCACTGACCTTCAGAACTCCAGCATGTC...ATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTTGAATCACATATTTTGCACATaGCGCTGTGCTGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LFLERQRKNLSWYGTILNHIFCT*RCAAPD
Trigger: ATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTG...ATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp ACTGGTAGGACAGAAGGCACAAGGTTCATAGAGAAGGGCTCTTTTGTTCTTCCCAAGGGCTTTCTACATTaGAATACTCAAGGGAACATG +
Preference number: 4 (lower is better)
Translates to: TGRTEGTRFIEKGSFVLPKGFLH*NTQGNM
Trigger: CATGTTCCCTTGAGTATTTCAATGTAGAAAGCCCTT...GGGAAGAACAAAAGAGCCCTTCTCTATGAACCTTGTGCCTTCTGTCCTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CAGACCCTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCCAAGTTCTCTGGAAGTaGAACTCAAATAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: QTLFLERQRKNLSWYGTIQVLWK*NSNRRE
Trigger: TTCTCTCCTATTTGAGTTTCACTTCCAGAGAACTTG...GATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAGGGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp GTTGCTGTGATATCCAAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGGGGTTTATTTGTGTCTaGCAGGAAGACGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: VAVISKYMINGLNLQNSLGFICV*QEDGES
Trigger: TGACTCCCCGTCTTCCTGGCAGACACAAATAAACCC...CAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTTGGATATCACAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CATAAGATCCAGCACCATCTCAAAACGAGCCTTTTGAGTGGTTTCACTGTCTGTTGGAAAAACTTCTCTTaGGAAGCGAAGAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: HKIQHHLKTSLLSGFTVCWKNFS*EAKRAS
Trigger: AGATGCCCTCTTCGCTTCCCAAGAGAAGTTTTTCCA...ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAGATGGTGCTGGATCTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp CCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATACTCTGCAACCATTCTaGATACTTTTCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: PDVPHSWDSERKTCCVSHTLQPF*ILFCDL
Trigger: GAGATCACAGAAAAGTATCCAGAATGGTTGCAGAGT...ATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp GGCTGGAGCTTTAAGGAGAAAATAGTGACACTGAAGCCCCATGACTATATCACAAGCTCTTTTGGAGGATaGCCTAAATCTTGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: GWSFKEKIVTLKPHDYITSSFGG*PKSCSC
Trigger: GCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCT...TGTGATATAGTCATGGGGCTTCAGTGTCACTATTTTCTCCTTAAAGCTCCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp TTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGAAAACCTCAGCTGGTATaGCACAATCTTGAATGGGAT +
Preference number: 4 (lower is better)
Translates to: FPIAGTQRGKRVVFHMIRKPQLV*HNLEWD
Trigger: ATCCCATTCAAGATTGTGCCATACCAGCTGAGGTTT...TCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
CDS-3UTR TCA 90 bp GTTGCTGTGATATCCAAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGGACATGCTGGAGTTCTaGAGGTCAGTGGCATTTTTG +
Preference number: 4 (lower is better)
Translates to: VAVISKYMINGLNLQNSLDMLEF*RSVAFL
Trigger: CAAAAATGCCACTGACCTTCAGAACTCCAGCATGTC...CAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTTGGATATCACAGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCGGTAGAGATTCCCGATaGCTCTGCAACCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: PRDRILRESCISNKPECIGRDSR*LCNHSG
Trigger: TCCAGAATGGTTGCAGAGTCATCGGGAATCTCTACC...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCCGTAAATGGACTAGATaGGGGGAAATAGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: PRDRILRESCISNKPECIRKWTR*GEIGWA
Trigger: GGCCCATCCTATTTCCCCTCATCTAGTCCATTTACG...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp TTTTTCCATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCTTCTGCATAATACTCTaGATGATGGGGAGGATGTTC +
Preference number: 4 (lower is better)
Translates to: FFHLWQNRDVLHSDLGSSFCIIL*MMGRMF
Trigger: GAACATCCTCCCCATCATGCAGAGTATTATGCAGAA...GGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGATGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp TTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGATTGGAGAGTAGGTTCTaGATAATACTCTGCATGATG +
Preference number: 4 (lower is better)
Translates to: FPIAGTQRGKRVVFHMIRLESRF*IILCMM
Trigger: CATCATGCAGAGTATTATGCAGAACCTACTCTCCAA...TCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR GCA 90 bp CATAAGATCCAGCACCATCTCAAAACGAGCCTTTTGAGTGGTTTCACTGTCTGTGTCTCTGCCTCAAACTaGTCACATATTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: HKIQHHLKTSLLSGFTVCVSASN*SHILHM
Trigger: CATGTGCAAAATATGTGAGCAGTTTGAGGCAGAGAC...ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAGATGGTGCTGGATCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR GCA 90 bp TGCCTCAAACTGCTCACATATTTTGCACATGACGCTGTGCTGCTCCTGATATTTGTCTCTGCCTCAAACTaGTCACATATTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: CLKLLTYFAHDAVLLLIFVSASN*SHILHM
Trigger: CATGTGCAAAATATGTGAGCAGTTTGAGGCAGAGAC...AAATATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTTTGAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR GCA 90 bp TGCCTCAAACTGCTCACATATTTTGCACATGACGCTGTGCTGCTCCTGATATTTAAATCTTGTAGCTGCTaGATAAGATCCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: CLKLLTYFAHDAVLLLIFKSCSC*IRSSTI
Trigger: GATGGTGCTGGATCTTATGCAGCAGCTACAAGATTT...AAATATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTTTGAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp ATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCATGCTCTACTCTGCAACCATTCTaGATACTTTTCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: ISGRTETFYIQIWALPCSTLQPF*ILFCDL
Trigger: GAGATCACAGAAAAGTATCCAGAATGGTTGCAGAGT...AGAGCATGGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp ATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCACTCTGCAACCATTCTaGATACTTTTCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: MFPIAGTQRGKRVVFHMITLQPF*ILFCDL
Trigger: GAGATCACAGAAAAGTATCCAGAATGGTTGCAGAGT...GATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CCA 90 bp GACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCTGGGGAAACGAGCCTTTTGAGTaGTTTCACTGTCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: DRILRESCISNKPECIWGNEPFE*FHCLWG
Trigger: CCCCCACAGACAGTGAAACCACTCAAAAGGCTCGTT...TCCCCAGATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGACAAAGCCAGAATGTATCTaGGGAAGAATAGCCATTAAT +
Preference number: 4 (lower is better)
Translates to: PHSWDSERKTCCVSHDQTKPECI*GRIAIN
Trigger: ATTAATGGCTATTCTTCCCCAGATACATTCTGGCTT...TGTCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CCA 90 bp GGAGTAGGGTTCACAGAAATGGCCTGTGAAACAGACCCTATTCCTAGAGAGACATGTCCAGTTTTTGGCTaGAGCTTTAAGGAGAAAATA +
Preference number: 4 (lower is better)
Translates to: GVGFTEMACETDPIPRETCPVFG*SFKEKI
Trigger: TATTTTCTCCTTAAAGCTCCAGCCAAAAACTGGACA...TGTCTCTCTAGGAATAGGGTCTGTTTCACAGGCCATTTCTGTGAACCCTACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp TTTTTCCATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCTTCTTTATCACAGCTTaGGCTCAAAAAGGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: FFHLWQNRDVLHSDLGSSFFITA*AQKGWD
Trigger: ATCCCAACCTTTTTGAGCTCAAGCTGTGATAAAGAA...GGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGATGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTTGAATATTTCCCAAATAGCCTaGGACCTTGAGAACATTTCC +
Preference number: 4 (lower is better)
Translates to: LFLERQRKNLSWYGTILNISQIA*DLENIS
Trigger: GGAAATGTTCTCAAGGTCTCAGGCTATTTGGGAAAT...ATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR GCA 90 bp TGCCTCAAACTGCTCACATATTTTGCACATGACGCTGTGCTGCTCCTGATATTTTTGGAGAGTAGGTTCTaGATAATACTCTGCATGATG +
Preference number: 4 (lower is better)
Translates to: CLKLLTYFAHDAVLLLIFLESRF*IILCMM
Trigger: CATCATGCAGAGTATTATGCAGAACCTACTCTCCAA...AAATATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTTTGAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CCA 90 bp GGCTGGAGCTTTAAGGAGAAAATAGTGACACTGAAGCCCCATGACTATATCACAACTCTGCAACCATTCTaGATACTTTTCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: GWSFKEKIVTLKPHDYITTLQPF*ILFCDL
Trigger: GAGATCACAGAAAAGTATCCAGAATGGTTGCAGAGT...TGTGATATAGTCATGGGGCTTCAGTGTCACTATTTTCTCCTTAAAGCTCCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR TCA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCTCAAAACGAGCCTTTTaGGTGGTTTCACTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRDRILRESCISNKPECISKRAF*VVSLSV
Trigger: CACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGA...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CCA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCTGGAAAAACTTCTCTTaGGAAGCGAAGAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: PRDRILRESCISNKPECIWKNFS*EAKRAS
Trigger: AGATGCCCTCTTCGCTTCCCAAGAGAAGTTTTTCCA...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp ACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCGAACTCCGCAGTGGCTaGGGAAGCCAGTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: TEGSGQTSPAGDTPASGPELRSG*GSQFTV
Trigger: GACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTTC...GGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp ACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCGGTGGGCCCGAAAGATaGAGGGCATCCAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: TEGSGQTSPAGDTPASGPGGPER*RASRSK
Trigger: CTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACC...GGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CAA 90 bp ACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCTGGTATGGCACAATCTaGAATGGGATGACAGAGGGC +
Preference number: 5 (lower is better)
Translates to: TEGSGQTSPAGDTPASGPWYGTI*NGMTEG
Trigger: GCCCTCTGTCATCCCATTCAAGATTGTGCCATACCA...GGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CAA 90 bp AATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCGCCATCCAGTCTCCTTaGCCAACTGAGGTGCAGACT +
Preference number: 5 (lower is better)
Translates to: NGMTEGSGQTSPAGDTPAAIQSP*PTEVQT
Trigger: AGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGGC...GGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp GCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCTCAGCGGCGGCCATCTaGCTACCTCCGACTTGCCGT +
Preference number: 5 (lower is better)
Translates to: ARKIEGIQVKVEARRHLSSAAAI*LPPTCR
Trigger: ACGGCAAGTCGGAGGTAGCAAGATGGCCGCCGCTGA...GGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp ATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCAGCTCTCAGCGGCGGCCATCTaGCTACCTCCGACTTGCCGT +
Preference number: 5 (lower is better)
Translates to: IEGIQVKVEARRHLSSQLSAAAI*LPPTCR
Trigger: ACGGCAAGTCGGAGGTAGCAAGATGGCCGCCGCTGA...GAGCTGGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp CTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGCATCCAGGTCAAAGTaGAGGCCAGGAGGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LAPGGPERLRASRSKLRPASRSK*RPGGWG
Trigger: TCCCCAGCCTCCTGGCCTCAACTTTGACCTGGATGC...TGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495624.1
CDS-3UTR CAA 90 bp AGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGGCGAAGAGGGCATCTTaGGCAGTGTCTCCTGGCGAT +
Preference number: 5 (lower is better)
Translates to: RHCSPLAPGGPERLRASRAKRAS*AVSPGD
Trigger: ATCGCCAGGAGACACTGCCAAAGATGCCCTCTTCGC...CCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CAA 90 bp ACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGGAACTCCGCAGTGGCTaGGGAAGCCAGTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: TWWARKIEGIQVKVEARRELRSG*GSQFTV
Trigger: GACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTTC...CCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp CTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGTGGGCCCGAAAGATaGAGGGCATCCAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LAPGGPERLRASRSKLRPGGPER*RASRSK
Trigger: CTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACC...TGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CAA 90 bp TGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGGGTGGGCCCGAAAGATaGAGGGCATCCAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: WHNLEWDDRGQRADFSRRGGPER*RASRSK
Trigger: CTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACC...CCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CAA 90 bp CAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGGTGGGCCCGAAAGATaGAGGGCATCCAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: QTLFTTGTWWARKIEGIQGGPER*RASRSK
Trigger: CTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACC...CTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CAA 90 bp GAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCAGCCCCTCCATGGCCTaGGTCAGCTCTTCTTCCGAC +
Preference number: 5 (lower is better)
Translates to: ERLRASRSKLRPGGISPASPSMA*VSSSSD
Trigger: GTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGCT...GGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp ACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCCTCAAAACGAGCCTTTaGAGTGGTTTCACTGTCTGT +
Preference number: 5 (lower is better)
Translates to: TEGSGQTSPAGDTPASGPLKTSL*SGFTVC
Trigger: ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAG...GGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CAA 90 bp ACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCGCATCCAGGTCAAAGTaGAGGCCAGGAGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: TLFTTGTWWARKIEGIQVASRSK*RPGGIS
Trigger: AGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGC...GACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp CCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTGGTGGGCCCGAAAGATaGAGGGCATCCAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: PQVTLLPQVPMVLLTPDVGGPER*RASRSK
Trigger: CTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACC...AACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS GCA 90 bp GAACTGCTCCACCAGGTGGGGTTCTTCCTCAGCCAACTCCTTCATTaGCTTCTCGAACTCCGCAGTGGCTTGGGAAGCCAGTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: ELLHQVGFFLSQLLH*LLELRSGLGSQFTV
Trigger: GACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCTGAGGAAGAACCCCACCTGGTGGAGCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000368072.10
ENST00000392220.2
ENST00000462644.5
ENST00000472750.5
ENST00000524939.1
ENST00000532508.5
ENST00000532643.5
ENST00000533104.1
ENST00000533699.5
CDS-3UTR CAA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGAACTCCGCAGTGGCTaGGGAAGCCAGTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: YGTILNGMTEGSGQTSPAELRSG*GSQFTV
Trigger: GACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTTC...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp GAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCGAACTCCGCAGTGGCTaGGGAAGCCAGTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: ERLRASRSKLRPGGISPAELRSG*GSQFTV
Trigger: GACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTTC...GGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp GGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCAGCATCCAGGTCAAAGTaGAGGCCAGGAGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: GDTPASGPNGSADSRCSPASRSK*RPGGIS
Trigger: AGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGC...TGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp GTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCGCCATCCAGTCTCCTTaGCCAACTGAGGTGCAGACT +
Preference number: 5 (lower is better)
Translates to: VWHNLEWDDRGQRADFSRAIQSP*PTEVQT
Trigger: AGTCTGCACCTCAGTTGGCAAAGGAGACTGGATGGC...GCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp CAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACGGTGCTGGGGAGGGTTaGGCTTTATCGAAATCATCA +
Preference number: 5 (lower is better)
Translates to: QTSPAGDTPASGPNGSADGAGEG*ALSKSS
Trigger: TGATGATTTCGATAAAGCCAAACCCTCCCCAGCACC...GTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368072.10
CDS-3UTR CAA 90 bp CCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCACAGCCAACTCCTTCATaGCCTTCTCGAACTCCGCAG +
Preference number: 5 (lower is better)
Translates to: PQVPMVLLTPDVPHSWDSQPTPS*PSRTPQ
Trigger: CTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCTG...TGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp TGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGGGGTACAGCACATCCTaGGAGAGTAGGTTCTGCATA +
Preference number: 5 (lower is better)
Translates to: WHNLEWDDRGQRADFSRRGYSTS*ESRFCI
Trigger: TATGCAGAACCTACTCTCCAAGGATGTGCTGTACCC...CCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CAA 90 bp AGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGGGGTACAGCACATCCTaGGAGAGTAGGTTCTGCATA +
Preference number: 5 (lower is better)
Translates to: RHCSPLAPGGPERLRASRGYSTS*ESRFCI
Trigger: TATGCAGAACCTACTCTCCAAGGATGTGCTGTACCC...CCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CAA 90 bp TCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGACTCCAGCCAGCTCTTTaGGAGGATGGCCTAAATCTT +
Preference number: 5 (lower is better)
Translates to: SPAGDTPASGPNGSADSRLQPAL*EDGLNL
Trigger: AAGATTTAGGCCATCCTCCAAAAGAGCTGGCTGGAG...TCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CAA 90 bp ACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCCTCCAGCCAGCTCTTTaGGAGGATGGCCTAAATCTT +
Preference number: 5 (lower is better)
Translates to: TLFTTGTWWARKIEGIQVLQPAL*EDGLNL
Trigger: AAGATTTAGGCCATCCTCCAAAAGAGCTGGCTGGAG...GACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CAA 90 bp ACCAGAGTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCGCATCCAGGTCAAAGTaGAGGCCAGGAGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: TRVPTNICQPRSVDPLGAASRSK*RPGGIS
Trigger: AGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGC...GGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTACTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp CTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCATGGTATGGCACAATCTaGAATGGGATGACAGAGGGC +
Preference number: 5 (lower is better)
Translates to: LAPGGPERLRASRSKLRPWYGTI*NGMTEG
Trigger: GCCCTCTGTCATCCCATTCAAGATTGTGCCATACCA...TGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CAA 90 bp CAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACATGCCTTCCTTCACCTaGCAGGTAGCTGGAACTTTG +
Preference number: 5 (lower is better)
Translates to: QTSPAGDTPASGPNGSADMPSFT*QVAGTL
Trigger: CAAAGTTCCAGCTACCTGCAAGGTGAAGGAAGGCAT...GTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp TGCCCCTCCTCCCCAGATCCAAGAGAGGGAGTAGAGACAAGGCACAAAGACCCTAACAGTCTGGCCAGTTaGGGTGCTGTCAAACTTGCC +
Preference number: 5 (lower is better)
Translates to: CPSSPDPREGVETRHKDPNSLAS*GAVKLA
Trigger: GGCAAGTTTGACAGCACCCAAACTGGCCAGACTGTT...AGGGTCTTTGTGCCTTGTCTCTACTCCCTCTCTTGGATCTGGGGAGGAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS TCA 90 bp CCAGTTTGGGTGCTGTCAAACTTGCCGGGTCGGCAGCACACAGTGTaGACTCCATACCAACATATGTCAGCCAAGGTCCGTAGACCCACT +
Preference number: 5 (lower is better)
Translates to: PVWVLSNLPGRQHTV*TPYQHMSAKVRRPT
Trigger: AGTGGGTCTACGGACCTTGGCTGACATATGTTGGTATGGAGTTCACACTGTGTGCTGCCGACCCGGCAAGTTTGACAGCACCCAAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467711.5
CDS-3UTR CAA 90 bp CTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGGTGCTGGGGAGGGTTaGGCTTTATCGAAATCATCA +
Preference number: 5 (lower is better)
Translates to: LFTTGTWWARKIEGIQVKGAGEG*ALSKSS
Trigger: TGATGATTTCGATAAAGCCAAACCCTCCCCAGCACC...TTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CAA 90 bp GGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCACTGGAAAAACTTCTCTaGGGAAGCGAAGAGGGCATC +
Preference number: 5 (lower is better)
Translates to: GDTPASGPNGSADSRCSPLEKLL*GSEEGI
Trigger: GATGCCCTCTTCGCTTCCCAAGAGAAGTTTTTCCAG...TGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp GCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCCTGGAAAAACTTCTCTaGGGAAGCGAAGAGGGCATC +
Preference number: 5 (lower is better)
Translates to: ARKIEGIQVKVEARRHLSLEKLL*GSEEGI
Trigger: GATGCCCTCTTCGCTTCCCAAGAGAAGTTTTTCCAG...GGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp ATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCAGCTCGGGTACAGCACATCCTaGGAGAGTAGGTTCTGCATA +
Preference number: 5 (lower is better)
Translates to: IEGIQVKVEARRHLSSQLGYSTS*ESRFCI
Trigger: TATGCAGAACCTACTCTCCAAGGATGTGCTGTACCC...GAGCTGGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp CAGACTTCTCCCGCAGGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACAACTGCTCACATATTTaGCACATGACGCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: QTSPAGDTPASGPNGSADNCSHI*HMTLCC
Trigger: GCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTT...GTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACCTGCGGGAGAAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CAA 90 bp AGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGAACTGCTCACATATTTaGCACATGACGCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: RHCSPLAPGGPERLRASRNCSHI*HMTLCC
Trigger: GCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTT...CCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CAA 90 bp CTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAAACTGCTCACATATTTaGCACATGACGCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: LAPGGPERLRASRSKLRPNCSHI*HMTLCC
Trigger: GCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTT...TGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CAA 90 bp GGTGACACTCCTGCCTCAGGTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATGGTATGGCACAATCTaGAATGGGATGACAGAGGGC +
Preference number: 5 (lower is better)
Translates to: GDTPASGPNGSADSRCSPWYGTI*NGMTEG
Trigger: GCCCTCTGTCATCCCATTCAAGATTGTGCCATACCA...TGGGGAACATCTGGAGTCAGCAGAACCATTGGGACCTGAGGCAGGAGTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CAA 90 bp GAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCCTGGAAAAACTTCTCTaGGGAAGCGAAGAGGGCATC +
Preference number: 5 (lower is better)
Translates to: ERLRASRSKLRPGGISPALEKLL*GSEEGI
Trigger: GATGCCCTCTTCGCTTCCCAAGAGAAGTTTTTCCAG...GGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp AAGATCCAGCACCATCTCAAAACGAGCCTTTTGAGTGGTTTCACTGTCTGTGGGAGCCCCTCCATGGCCTaGGTCAGCTCTTCTTCCGAC +
Preference number: 5 (lower is better)
Translates to: KIQHHLKTSLLSGFTVCGSPSMA*VSSSSD
Trigger: GTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGCT...CCCACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAGATGGTGCTGGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp CCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGACAAGCCCCTCCATGGCCTaGGTCAGCTCTTCTTCCGAC +
Preference number: 5 (lower is better)
Translates to: PHSWDSERKTCCVSHDQTSPSMA*VSSSSD
Trigger: GTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGCT...TGTCTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp GAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCGGGTACAGCACATCCTaGGAGAGTAGGTTCTGCATA +
Preference number: 5 (lower is better)
Translates to: ERLRASRSKLRPGGISPAGYSTS*ESRFCI
Trigger: TATGCAGAACCTACTCTCCAAGGATGTGCTGTACCC...GGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp ATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCAGCTCAACTGCTCACATATTTaGCACATGACGCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: IEGIQVKVEARRHLSSQLNCSHI*HMTLCC
Trigger: GCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTT...GAGCTGGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp CAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGCTCAAAACGAGCCTTTaGAGTGGTTTCACTGTCTGT +
Preference number: 5 (lower is better)
Translates to: QTLFTTGTWWARKIEGIQLKTSL*SGFTVC
Trigger: ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAG...CTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CAA 90 bp AATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTGACACTCCTGCCACTAGTGACACATTCTaGCTGAAGAACAAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: NGMTEGSGQTSPAGDTPATSDTF*LKNKFS
Trigger: AGAGAACTTGTTCTTCAGCAAGAATGTGTCACTAGT...GGCAGGAGTGTCACCTGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp CAGACCCTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCGCGAAGAGGGCATCTTaGGCAGTGTCTCCTGGCGAT +
Preference number: 5 (lower is better)
Translates to: QTLFLERQRKNLSWYGTIAKRAS*AVSPGD
Trigger: ATCGCCAGGAGACACTGCCAAAGATGCCCTCTTCGC...GATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAGGGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368072.10
CDS-3UTR CAA 90 bp GTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCCTCAAAACGAGCCTTTaGAGTGGTTTCACTGTCTGT +
Preference number: 5 (lower is better)
Translates to: VWHNLEWDDRGQRADFSRLKTSL*SGFTVC
Trigger: ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAG...GCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368072.10
ENST00000472750.5
ENST00000495624.1
CDS-3UTR CAA 90 bp GTCCCAATGGTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGCAGGTAGCTGGAACTTaGATAGTGGCAGAAACCACA +
Preference number: 5 (lower is better)
Translates to: VPMVLLTPDVPHSWDSERQVAGT*IVAETT
Trigger: TGTGGTTTCTGCCACTATCAAAGTTCCAGCTACCTG...CCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAACCATTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp GTTCTGCTGACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTAACAGTCTGGCCAGTTaGGGTGCTGTCAAACTTGCC +
Preference number: 5 (lower is better)
Translates to: VLLTPDVPHSWDSERKTCNSLAS*GAVKLA
Trigger: GGCAAGTTTGACAGCACCCAAACTGGCCAGACTGTT...ACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGTCAGCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS TCA 90 bp CAAGATCGTGCCACTGTGCTCCAACTGGAGCTAGACCCTTTTCTGTaGTCTCCTTCAGTGATGGGTACAGCACATCCTTGGAGAGTAGGT +
Preference number: 5 (lower is better)
Translates to: QDRATVLQLELDPFL*SPSVMGTAHPWRVG
Trigger: ACCTACTCTCCAAGGATGTGCTGTACCCATCACTGAAGGAGATCACAGAAAAGGGTCTAGCTCCAGTTGGAGCACAGTGGCACGATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532508.5
CDS-3UTR CAA 90 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGGTGCTGGGGAGGGTTaGGCTTTATCGAAATCATCA +
Preference number: 5 (lower is better)
Translates to: VSHDQTLFTTGTWWARKIGAGEG*ALSKSS
Trigger: TGATGATTTCGATAAAGCCAAACCCTCCCCAGCACC...AATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS-3UTR CAA 90 bp AGCTCTTTTGGAGGATGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCACCCAGCCAACTCCTTCATaGCCTTCTCGAACTCCGCAG +
Preference number: 5 (lower is better)
Translates to: SSFGGWPKSCSCCIRSSTQPTPS*PSRTPQ
Trigger: CTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCTG...GGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp GTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAGGTCAGTGGCATTTTaGGCTAATCCACTTAGTGTT +
Preference number: 5 (lower is better)
Translates to: VWHNLEWDDRGQRADFSRRSVAF*ANPLSV
Trigger: AACACTAAGTGGATTAGCCAAAAATGCCACTGACCT...GCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTCTCCAGCCAGCTCTTTaGGAGGATGGCCTAAATCTT +
Preference number: 5 (lower is better)
Translates to: VSHDQTLFTTGTWWARKILQPAL*EDGLNL
Trigger: AAGATTTAGGCCATCCTCCAAAAGAGCTGGCTGGAG...AATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CAA 90 bp GTACCTACCAACATATGTCAGCCAAGGTCCGTAGACCCACTGGGAGCCACAGAAAAGCAGGGTAACCATTaGAGTTCTCAGCCTGGAACA +
Preference number: 5 (lower is better)
Translates to: VPTNICQPRSVDPLGATEKQGNH*SSQPGT
Trigger: TGTTCCAGGCTGAGAACTCAAATGGTTACCCTGCTT...TTCTGTGGCTCCCAGTGGGTCTACGGACCTTGGCTGACATATGTTGGTAGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp TATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCAATCCTTGTCCAGTTTTaGGCTGGAGCTTTAAGGAGA +
Preference number: 5 (lower is better)
Translates to: YGTILNGMTEGSGQTSPAILVQF*AGALRR
Trigger: TCTCCTTAAAGCTCCAGCCAAAAACTGGACAAGGAT...TGCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS CCA 90 bp TCCTCAGCCAACTCCTTCATTGCCTTCTCGAACTCCGCAGTGGCTTaGGAAGCCAGTTCACTGTCGAATAGTTCCTGGAAAAACTTCTCT +
Preference number: 5 (lower is better)
Translates to: SSANSFIAFSNSAVA*EASSLSNSSWKNFS
Trigger: AGAGAAGTTTTTCCAGGAACTATTCGACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000368072.10
ENST00000392220.2
ENST00000462644.5
ENST00000472750.5
ENST00000524939.1
ENST00000532508.5
ENST00000532643.5
ENST00000533104.1
ENST00000533699.5
CDS CCA 90 bp GTTCTTCCTCAGCCAACTCCTTCATTGCCTTCTCGAACTCCGCAGTaGCTTGGGAAGCCAGTTCACTGTCGAATAGTTCCTGGAAAAACT +
Preference number: 5 (lower is better)
Translates to: VLPQPTPSLPSRTPQ*LGKPVHCRIVPGKT
Trigger: AGTTTTTCCAGGAACTATTCGACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCTGAGGAAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000368072.10
ENST00000392220.2
ENST00000462644.5
ENST00000472750.5
ENST00000524939.1
ENST00000532508.5
ENST00000532643.5
ENST00000533104.1
ENST00000533699.5
CDS-3UTR CAA 90 bp GCCAGCTCTTTTGGAGGATGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCCTCCAGCCAGCTCTTTaGGAGGATGGCCTAAATCTT +
Preference number: 5 (lower is better)
Translates to: ASSFGGWPKSCSCCIRSSLQPAL*EDGLNL
Trigger: AAGATTTAGGCCATCCTCCAAAAGAGCTGGCTGGAG...GCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp ATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCGCATCCAGGTCAAAGTaGAGGCCAGGAGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: MFPIAGTQRGKRVVFHMIASRSK*RPGGIS
Trigger: AGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGC...GATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp TGCCCCTCCTCCCCAGATCCAAGAGAGGGAGTAGAGACAAGGCACAAAGACCCTGAAGGGCTTTCTACATaGAAATACTCAAGGGAACAT +
Preference number: 5 (lower is better)
Translates to: CPSSPDPREGVETRHKDPEGLST*KYSREH
Trigger: ATGTTCCCTTGAGTATTTCAATGTAGAAAGCCCTTC...AGGGTCTTTGTGCCTTGTCTCTACTCCCTCTCTTGGATCTGGGGAGGAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp CACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTGAGGGCATCCAGGTCACTAACACATTTAATTTaGGAACAAAGGAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: HCSPLAPGGPERLRASRSLTHLI*EQRSNS
Trigger: GGAGTTGCTCCTTTGTTCCAAAATTAAATGTGTTAG...TGACCTGGATGCCCTCAATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS TCA 90 bp CTCTTCTTCCGACATGCTGGAGTTCTAGATAGGACAAGTAAGAGGTaGGCAGGTATACTACCTTCTTGGGATGCTCACCACTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: LFFRHAGVLDRTSKR*AGILPSWDAHHSLR
Trigger: CCTGAGAGAGTGGTGAGCATCCCAAGAAGGTAGTATACCTGCTCACCTCTTACTTGTCCTATCTAGAACTCCAGCATGTCGGAAGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532516.1
CDS-3UTR CAA 90 bp TGCCTCAAACTGCTCACATATTTTGCACATGACGCTGTGCTGCTCCTGATATTTCAGCCAACTCCTTCATaGCCTTCTCGAACTCCGCAG +
Preference number: 5 (lower is better)
Translates to: CLKLLTYFAHDAVLLLIFQPTPS*PSRTPQ
Trigger: CTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCTG...AAATATCAGGAGCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTTTGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp GTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGGGGTACAGCACATCCTaGGAGAGTAGGTTCTGCATA +
Preference number: 5 (lower is better)
Translates to: VPHSWDSERKTCCVSHDQGYSTS*ESRFCI
Trigger: TATGCAGAACCTACTCTCCAAGGATGTGCTGTACCC...CTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CAA 90 bp GTTTCACATGATCAGACACTGTTCACCACTGGCACCTGGTGGGCCCGAAAGATTCTCAAAACGAGCCTTTaGAGTGGTTTCACTGTCTGT +
Preference number: 5 (lower is better)
Translates to: VSHDQTLFTTGTWWARKILKTSL*SGFTVC
Trigger: ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAG...AATCTTTCGGGCCCACCAGGTGCCAGTGGTGAACAGTGTCTGATCATGTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CAA 90 bp GTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCAGATGCCTTCCTTCACCTaGCAGGTAGCTGGAACTTTG +
Preference number: 5 (lower is better)
Translates to: VPHSWDSERKTCCVSHDQMPSFT*QVAGTL
Trigger: CAAAGTTCCAGCTACCTGCAAGGTGAAGGAAGGCAT...CTGATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CAA 90 bp GAAAGATTGAGGGCATCCAGGTCAAAGTTGAGGCCAGGAGGCATCTCTCCAGCCCCCAGCATTACAATATaGTGTAGAACTAGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: ERLRASRSKLRPGGISPAPSITI*CRTSLL
Trigger: TAGGAGACTAGTTCTACACAATATTGTAATGCTGGG...GGCTGGAGAGATGCCTCCTGGCCTCAACTTTGACCTGGATGCCCTCAATCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CAA 90 bp GTATGGCACAATCTTGAATGGGATGACAGAGGGCAGCGGGCAGACTTCTCCCGCCTAACACATTTAATTTaGGAACAAAGGAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: VWHNLEWDDRGQRADFSRLTHLI*EQRSNS
Trigger: GGAGTTGCTCCTTTGTTCCAAAATTAAATGTGTTAG...GCGGGAGAAGTCTGCCCGCTGCCCTCTGTCATCCCATTCAAGATTGTGCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp CTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTTGAATCAGCCAACTCCTTCATaGCCTTCTCGAACTCCGCAG +
Preference number: 5 (lower is better)
Translates to: LFLERQRKNLSWYGTILNQPTPS*PSRTPQ
Trigger: CTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCTG...ATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp TGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCACCATCTCAAAACGAGCCAACTGCTCACATATTTaGCACATGACGCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: WPKSCSCCIRSSTISKRANCSHI*HMTLCC
Trigger: GCAGCACAGCGTCATGTGCAAAATATGTGAGCAGTT...GGCTCGTTTTGAGATGGTGCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp GCCAGCTCTTTTGGAGGATGGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGCCTCAAAACGAGCCTTTaGAGTGGTTTCACTGTCTGT +
Preference number: 5 (lower is better)
Translates to: ASSFGGWPKSCSCCIRSSLKTSL*SGFTVC
Trigger: ACAGACAGTGAAACCACTCAAAAGGCTCGTTTTGAG...GCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000532643.5
CDS-3UTR CAA 90 bp ATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACATGATCCTCCAGCCAGCTCTTTaGGAGGATGGCCTAAATCTT +
Preference number: 5 (lower is better)
Translates to: MFPIAGTQRGKRVVFHMILQPAL*EDGLNL
Trigger: AAGATTTAGGCCATCCTCCAAAAGAGCTGGCTGGAG...GATCATGTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462644.5
ENST00000472750.5
ENST00000495624.1
ENST00000532643.5
CDS-3UTR CAA 90 bp ACTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCAGCAAGAAGTGAATTCTaGTTGGGAGGTCATATCACT +
Preference number: 5 (lower is better)
Translates to: TPDVPHSWDSERKTCCVSARSEF*LGGHIT
Trigger: AGTGATATGACCTCCCAACAAGAATTCACTTCTTGC...TGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS-3UTR CAA 90 bp TTTTTCCATCTCTGGCAGAACAGAGACGTTTTACATTCAGATCTGGGCTCTTCCAAGCAGGGTAACCATTaGAGTTCTCAGCCTGGAACA +
Preference number: 5 (lower is better)
Translates to: FFHLWQNRDVLHSDLGSSKQGNH*SSQPGT
Trigger: TGTTCCAGGCTGAGAACTCAAATGGTTACCCTGCTT...GGAAGAGCCCAGATCTGAATGTAAAACGTCTCTGTTCTGCCAGAGATGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp CTCCAGATGTTCCCCATAGCTGGGACTCAGAGAGGAAAACGTGTTGTGTTTCACACTAGTGACACATTCTaGCTGAAGAACAAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LQMFPIAGTQRGKRVVFHTSDTF*LKNKFS
Trigger: AGAGAACTTGTTCTTCAGCAAGAATGTGTCACTAGT...GTGAAACACAACACGTTTTCCTCTCTGAGTCCCAGCTATGGGGAACATCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472750.5
CDS TCA 90 bp TTGTTGGGAGGTCATATCACTGCCCGTTCCTTGGCTGTGACATCATaGTTGCTATCAACTTCACTAAGAATTCTGGTGTTTTCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: LLGGHITARSLAVTS*LLSTSLRILVFSGN
Trigger: GTTGCCTGAAAACACCAGAATTCTTAGTGAAGTTGATAGCAATCATGATGTCACAGCCAAGGAACGGGCAGTGATATGACCTCCCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533104.1
CDS TCA 90 bp TGGCATTTTTGGCTAATCCACTTAGTGTTTCCTTTAGGCAAGAAGTaGATTCTTGTTGGGAGGTCATATCACTGCCCGTTCCTTGGCTGT +
Preference number: 5 (lower is better)
Translates to: WHFWLIHLVFPLGKK*ILVGRSYHCPFLGC
Trigger: ACAGCCAAGGAACGGGCAGTGATATGACCTCCCAACAAGAATTCACTTCTTGCCTAAAGGAAACACTAAGTGGATTAGCCAAAAATGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533104.1
CDS-3UTR CAA 90 bp CTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTTGAATCAGGTAGCTGGAACTTaGATAGTGGCAGAAACCACA +
Preference number: 5 (lower is better)
Translates to: LFLERQRKNLSWYGTILNQVAGT*IVAETT
Trigger: TGTGGTTTCTGCCACTATCAAAGTTCCAGCTACCTG...ATTCAAGATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp GGCTGGAGCTTTAAGGAGAAAATAGTGACACTGAAGCCCCATGACTATATCACAATCCTTGTCCAGTTTTaGGCTGGAGCTTTAAGGAGA +
Preference number: 5 (lower is better)
Translates to: GWSFKEKIVTLKPHDYITILVQF*AGALRR
Trigger: TCTCCTTAAAGCTCCAGCCAAAAACTGGACAAGGAT...TGTGATATAGTCATGGGGCTTCAGTGTCACTATTTTCTCCTTAAAGCTCCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp CAGACCCTATTCCTAGAGAGACAGAGGAAAAACCTCAGCTGGTATGGCACAATCTTTACCATACATAGTTaGAGAAAGACTGCCCTAGAG +
Preference number: 5 (lower is better)
Translates to: QTLFLERQRKNLSWYGTIFTIHS*RKTALE
Trigger: CTCTAGGGCAGTCTTTCTCAAACTATGTATGGTAAA...GATTGTGCCATACCAGCTGAGGTTTTTCCTCTGTCTCTCTAGGAATAGGGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS TCA 90 bp TGGCATTTTTGGCTAATCCACTTAGTGTTTCCTTTAGGCAAGAAGTaGATTCTTGTTGGGAGGTCATATCACTGCCTAGGAGAGATTAAA +
Preference number: 5 (lower is better)
Translates to: WHFWLIHLVFPLGKK*ILVGRSYHCLGEIK
Trigger: TTTAATCTCTCCTAGGCAGTGATATGACCTCCCAACAAGAATTCACTTCTTGCCTAAAGGAAACACTAAGTGGATTAGCCAAAAATGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532516.1
CDS-3UTR CAA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCGCAAGAAGTGAATTCTaGTTGGGAGGTCATATCACT +
Preference number: 5 (lower is better)
Translates to: PRDRILRESCISNKPECIARSEF*LGGHIT
Trigger: AGTGATATGACCTCCCAACAAGAATTCACTTCTTGC...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp GACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCTGGGGAAGGTCAGTGGCATTTTaGGCTAATCCACTTAGTGTT +
Preference number: 5 (lower is better)
Translates to: DRILRESCISNKPECIWGRSVAF*ANPLSV
Trigger: AACACTAAGTGGATTAGCCAAAAATGCCACTGACCT...TCCCCAGATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp GTTGCTGTGATATCCAAGTACATGATCAATGGACTTAACCTACAGAACAGTCTGCCCAGCATTACAATATaGTGTAGAACTAGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: VAVISKYMINGLNLQNSLPSITI*CRTSLL
Trigger: TAGGAGACTAGTTCTACACAATATTGTAATGCTGGG...CAGACTGTTCTGTAGGTTAAGTCCATTGATCATGTACTTGGATATCACAGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS-3UTR CAA 90 bp CCAAGGGACAGGATTCTAAGAGAATCATGTATCTCAAATAAGCCAGAATGTATCTTTACCATACATAGTTaGAGAAAGACTGCCCTAGAG +
Preference number: 5 (lower is better)
Translates to: PRDRILRESCISNKPECIFTIHS*RKTALE
Trigger: CTCTAGGGCAGTCTTTCTCAAACTATGTATGGTAAA...GATACATTCTGGCTTATTTGAGATACATGATTCTCTTAGAATCCTGTCCCTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368072.10
ENST00000472750.5
CDS CCA 72 bp AGGGCATCTTTGGCAGTGTCTCCTGGCGATCTCTTCTaGGGCCCCGAAGCATCAGGGGCCGTGGTGGTAGAA +
Preference number: 6 (lower is better)
Translates to: RASLAVSPGDLF*GPEASGAVVVE
Trigger: TTCTACCACCACGGCCCCTGATGCTTCGGGGCCCCAGAAGAGATCGCCAGGAGACACTGCCAAAGATGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368072.10
ENST00000392220.2
ENST00000462644.5
ENST00000524939.1
ENST00000532508.5
ENST00000532643.5
ENST00000533699.5
CDS CCA 72 bp CATCCCCTTCGTCCATGCCTAGCCCCTCCATGGCCTTaGTCAGCTCTTCTTCCGACATGCTGGAGTTCCACT +
Preference number: 6 (lower is better)
Translates to: HPLRPCLAPPWP*SALLPTCWSST
Trigger: AGTGGAACTCCAGCATGTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGCTAGGCATGGACGAAGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462644.5
ENST00000532643.5
CDS CAA 90 bp GGAACTGCTCCACCAGGTGGGGTTCTTCCTCAGCCAACTCCTTCATaGCCTTCTCGAACTCCGCAGTGGCTTGGGAAGCCAGTTCACTGT +
Preference number: 6 (lower is better)
Translates to: GTAPPGGVLPQPTPS*PSRTPQWLGKPVHC
Trigger: ACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCTGAGGAAGAACCCCACCTGGTGGAGCAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000368072.10
ENST00000392220.2
ENST00000462644.5
ENST00000472750.5
ENST00000524939.1
ENST00000532508.5
ENST00000532643.5
ENST00000533104.1
ENST00000533699.5
CDS CCA 72 bp CATCCCCTTCGTCCATGCCTAGCCCCTCCATGGCCTTaGTCAGCTCTTCTTCCGACATGCTGGAGTTCTAGA +
Preference number: 6 (lower is better)
Translates to: HPLRPCLAPPWP*SALLPTCWSSR
Trigger: TCTAGAACTCCAGCATGTCGGAAGAAGAGCTGACCAAGGCCATGGAGGGGCTAGGCATGGACGAAGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532516.1
CDS TCA 72 bp GTGCTGTCAAACTTGCCGGGTCGGCAGCACACAGTGTaGACTCCATACCAACATATGTCAGCCAAGGTCCGT +
Preference number: 6 (lower is better)
Translates to: VLSNLPGRQHTV*TPYQHMSAKVR
Trigger: ACGGACCTTGGCTGACATATGTTGGTATGGAGTTCACACTGTGTGCTGCCGACCCGGCAAGTTTGACAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467711.5
CDS CCA 72 bp CAGCCAACTCCTTCATTGCCTTCTCGAACTCCGCAGTaGCTTGGGAAGCCAGTTCACTGTCGAATAGTTCCT +
Preference number: 6 (lower is better)
Translates to: QPTPSLPSRTPQ*LGKPVHCRIVP
Trigger: AGGAACTATTCGACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTTCGAGAAGGCAATGAAGGAGTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368072.10
ENST00000392220.2
ENST00000462644.5
ENST00000472750.5
ENST00000524939.1
ENST00000532508.5
ENST00000532643.5
ENST00000533104.1
ENST00000533699.5
CDS CCA 72 bp GTGGCTTGGGAAGCCAGTTCACTGTCGAATAGTTCCTaGAAAAACTTCTCTTGGGAAGCGAAGAGGGCATCT +
Preference number: 6 (lower is better)
Translates to: VAWEASSLSNSS*KNFSWEAKRAS
Trigger: AGATGCCCTCTTCGCTTCCCAAGAGAAGTTTTTCCAGGAACTATTCGACAGTGAACTGGCTTCCCAAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000368072.10
ENST00000392220.2
ENST00000462644.5
ENST00000472750.5
ENST00000524939.1
ENST00000532508.5
ENST00000532643.5
ENST00000533104.1
ENST00000533699.5
CDS CCA 72 bp AACTCCTTCATTGCCTTCTCGAACTCCGCAGTGGCTTaGGAAGCCAGTTCACTGTCGAATAGTTCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: NSFIAFSNSAVA*EASSLSNSSWK
Trigger: TTTCCAGGAACTATTCGACAGTGAACTGGCTTCCCAAGCCACTGCGGAGTTCGAGAAGGCAATGAAGGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368072.10
ENST00000392220.2
ENST00000462644.5
ENST00000472750.5
ENST00000524939.1
ENST00000532508.5
ENST00000532643.5
ENST00000533104.1
ENST00000533699.5
CDS TCA 72 bp CGACATGCTGGAGTTCTAGATAGGACAAGTAAGAGGTaGGCAGGTATACTACCTTCTTGGGATGCTCACCAC +
Preference number: 6 (lower is better)
Translates to: RHAGVLDRTSKR*AGILPSWDAHH
Trigger: GTGGTGAGCATCCCAAGAAGGTAGTATACCTGCTCACCTCTTACTTGTCCTATCTAGAACTCCAGCATGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532516.1
CDS CCA 72 bp ATACTCACCATCTCTCCAGCCAGCTCTTTTGGAGGATaGCCTAAATCTTGTAGCTGCTGCATAAGATCCAGC +
Preference number: 6 (lower is better)
Translates to: ILTISPASSFGG*PKSCSCCIRSS
Trigger: GCTGGATCTTATGCAGCAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCTGGCTGGAGAGATGGTGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495624.1
CDS CCA 72 bp AGTTCACTGTCGAATAGTTCCTGGAAAAACTTCTCTTaGGAAGCGAAGAGGGCATCTTTGGCAGTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: SSLSNSSWKNFS*EAKRASLAVSP
Trigger: AGGAGACACTGCCAAAGATGCCCTCTTCGCTTCCCAAGAGAAGTTTTTCCAGGAACTATTCGACAGTGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000368072.10
ENST00000392220.2
ENST00000462644.5
ENST00000524939.1
ENST00000532508.5
ENST00000532643.5
ENST00000533699.5
CDS CCA 72 bp AGTTCACTGTCGAATAGTTCCTGGAAAAACTTCTCTTaGGAAGCGAAGAGGGCATCTTTCCAGAAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SSLSNSSWKNFS*EAKRASFQKLL
Trigger: GAGGAGCTTCTGGAAAGATGCCCTCTTCGCTTCCCAAGAGAAGTTTTTCCAGGAACTATTCGACAGTGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472750.5
ENST00000533104.1
CDS TCA 72 bp TGGCTAATCCACTTAGTGTTTCCTTTAGGCAAGAAGTaGATTCTTGTTGGGAGGTCATATCACTGCCCGTTC +
Preference number: 6 (lower is better)
Translates to: WLIHLVFPLGKK*ILVGRSYHCPF
Trigger: GAACGGGCAGTGATATGACCTCCCAACAAGAATTCACTTCTTGCCTAAAGGAAACACTAAGTGGATTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533104.1
CDS TCA 72 bp GGTCATATCACTGCCCGTTCCTTGGCTGTGACATCATaGTTGCTATCAACTTCACTAAGAATTCTGGTGTTT +
Preference number: 6 (lower is better)
Translates to: GHITARSLAVTS*LLSTSLRILVF
Trigger: AAACACCAGAATTCTTAGTGAAGTTGATAGCAATCATGATGTCACAGCCAAGGAACGGGCAGTGATATGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533104.1
CDS TCA 72 bp TGGCTAATCCACTTAGTGTTTCCTTTAGGCAAGAAGTaGATTCTTGTTGGGAGGTCATATCACTGCCTAGGA +
Preference number: 6 (lower is better)
Translates to: WLIHLVFPLGKK*ILVGRSYHCLG
Trigger: TCCTAGGCAGTGATATGACCTCCCAACAAGAATTCACTTCTTGCCTAAAGGAAACACTAAGTGGATTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532516.1