RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PEX16 (Homo sapiens)

Ensembl gene IDs: ENSG00000121680

Ensembl transcript IDs: ENST00000241041.7, ENST00000378750.10, ENST00000523721.2, ENST00000525192.5, ENST00000525229.5, ENST00000527371.1, ENST00000528674.5, ENST00000529030.1, ENST00000532554.5, ENST00000532681.5, ENST00000533151.5

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCTGGGAGGAACGCTGGTGGCGACCAGGGCTGTGTGTGGGGCCTaGCCGGTAGGCACGGAGAGGCCGCACGCTGGGACGCTGCCGGAG +
Preference number: 1 (lower is better)
Translates to: VLGGTLVATRAVCGA*PVGTERPHAGTLPE
Trigger: CTCCGGCAGCGTCCCAGCGTGCGGCCTCTCCGTGCCTACCGGCCAGGCCCCACACACAGCCCTGGTCGCCACCAGCGTTCCTCCCAGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378750.10
3UTR CCA 90 bp CAAGGGTGTCCTGGGAGGAACGCTGGTGGCGACCAGGGCTGTGTGTaGGGCCTGGCCGGTAGGCACGGAGAGGCCGCACGCTGGGACGCT +
Preference number: 1 (lower is better)
Translates to: QGCPGRNAGGDQGCV*GLAGRHGEAARWDA
Trigger: AGCGTCCCAGCGTGCGGCCTCTCCGTGCCTACCGGCCAGGCCCCACACACAGCCCTGGTCGCCACCAGCGTTCCTCCCAGGACACCCTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378750.10
3UTR CCA 90 bp GGGCTGCAGTGGCATCGTCACAGGAGAGCGCAGTCAAGGGTGTCCTaGGAGGAACGCTGGTGGCGACCAGGGCTGTGTGTGGGGCCTGGC +
Preference number: 1 (lower is better)
Translates to: GLQWHRHRRAQSRVS*EERWWRPGLCVGPG
Trigger: GCCAGGCCCCACACACAGCCCTGGTCGCCACCAGCGTTCCTCCCAGGACACCCTTGACTGCGCTCTCCTGTGACGATGCCACTGCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378750.10
3UTR GCA 90 bp CTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATGGCTaGCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGTCACCG +
Preference number: 1 (lower is better)
Translates to: LTRGQRESSSVRSYG*RGEQLPGLHEVKSP
Trigger: CGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR TCA 90 bp GCTCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTaGAGTCACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCT +
Preference number: 1 (lower is better)
Translates to: APMAAEASSFPGSMR*SHRFLWERSLDPTP
Trigger: AGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR TCA 90 bp GCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATaGACACCTCCACGCACTCCAGCACGCTCAGCCATGTCAGCAGCT +
Preference number: 1 (lower is better)
Translates to: ASGPLHPTPWQLPSP*TPPRTPARSAMSAA
Trigger: AGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGTGGAGGTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
3UTR TCA 90 bp TGTTCGCTCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATaGGGTGAAGTCACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCA +
Preference number: 1 (lower is better)
Translates to: CSLLWLPRRAASRAP*GEVTAFCGRGAWIP
Trigger: TGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR TCA 90 bp AGGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTTGGCCCAGCAGTaGCAAGGTGCGGGCTGCAGTGGCATCGTCACAGGAGAGCGCAGT +
Preference number: 1 (lower is better)
Translates to: RSLDPTPSEGFLAQQ*QGAGCSGIVTGERS
Trigger: ACTGCGCTCTCCTGTGACGATGCCACTGCAGCCCGCACCTTGTCACTGCTGGGCCAAGAAGCCTTCACTAGGAGTGGGATCCAGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378750.10
3UTR CCA 90 bp TTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTTaGCCCAGCAGTGACAAGGTGCGGGCTGCAGTGGCATCGTCACAG +
Preference number: 1 (lower is better)
Translates to: FCGRGAWIPLLVKAS*PSSDKVRAAVASSQ
Trigger: CTGTGACGATGCCACTGCAGCCCGCACCTTGTCACTGCTGGGCCAAGAAGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR CCA 90 bp TGTGCCTGGGTCTCTCTGTCCAGTGGAACGATAGGGGGTGAAGTCTaGAGGCCAGCCTTGAACCAGAGCAGCAGGAGCATCCGCAGTACA +
Preference number: 1 (lower is better)
Translates to: CAWVSLSSGTIGGEV*RPALNQSSRSIRST
Trigger: TGTACTGCGGATGCTCCTGCTGCTCTGGTTCAAGGCTGGCCTCCAGACTTCACCCCCTATCGTTCCACTGGACAGAGAGACCCAGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525229.5
3UTR CCA 90 bp CTTTTACTCTCAACCGAGGATGCAGGGCTTAAAGTGCCACTTGCGTaGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCACAGGGAGGCT +
Preference number: 1 (lower is better)
Translates to: LLLSTEDAGLKVPLA*EPGSLFTRLCHREA
Trigger: AGCCTCCCTGTGACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGAGTAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR GCA 90 bp GGGAGAAAAGCCTTTTACTCTCAACCGAGGATGCAGGGCTTAAAGTaGCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTC +
Preference number: 1 (lower is better)
Translates to: GRKAFYSQPRMQGLK*HLRGSQAHCSPGSV
Trigger: GACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGAGTAAAAGGCTTTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR CCA 90 bp TGTGACAGCAGTCACTGGGCAAACACTCTTGAGGTAGTTACAATCTaGGAATCCTGGAATCTGGGAGATCTAGACTTGAATCTTGGTTCT +
Preference number: 1 (lower is better)
Translates to: CDSSHWANTLEVVTI*ESWNLGDLDLNLGS
Trigger: AGAACCAAGATTCAAGTCTAGATCTCCCAGATTCCAGGATTCCCAGATTGTAACTACCTCAAGAGTGTTTGCCCAGTGACTGCTGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529030.1
3UTR CCA 90 bp TTTTCAAAACCCAGTGCATTCTTTCAGGACTGTGACAGCAGTCACTaGGCAAACACTCTTGAGGTAGTTACAATCTGGGAATCCTGGAAT +
Preference number: 1 (lower is better)
Translates to: FSKPSAFFQDCDSSH*ANTLEVVTIWESWN
Trigger: ATTCCAGGATTCCCAGATTGTAACTACCTCAAGAGTGTTTGCCCAGTGACTGCTGTCACAGTCCTGAAAGAATGCACTGGGTTTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529030.1
3UTR-3UTR CCA 90 bp TCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGGGAGAGGCCGCACGCTaGGACGCTGCCGGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: SAITRVQASCPHQGPAREGEAAR*DAAGVS
Trigger: ACTGACTCCGGCAGCGTCCCAGCGTGCGGCCTCTCC...CTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378750.10
3UTR-3UTR TCA 90 bp CACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTCTTGGCCCAGCAGTaGCAAGGTGCGGGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: HPGSGFLSSPGASERAAVFLAQQ*QGAGCS
Trigger: ACTGCAGCCCGCACCTTGTCACTGCTGGGCCAAGAA...CACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR TCA 90 bp CTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCCGGGCTCCATGAGGTaGAGTCACCGCTTTCTGTGG +
Preference number: 2 (lower is better)
Translates to: LGSVQPSPGFRLPVLTRGPGSMR*SHRFLW
Trigger: CCACAGAAAGCGGTGACTTCACCTCATGGAGCCCGG...GCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR GCA 90 bp AGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGTTCGCTCCTATGGCTaGCGAGGCGAGCAGCTTCCC +
Preference number: 2 (lower is better)
Translates to: SVQPSPGFRLPVLTRGQRVRSYG*RGEQLP
Trigger: GGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAAC...TCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR CCA 90 bp CTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGTCAAGGGTGTCCTaGGAGGAACGCTGGTGGCGA +
Preference number: 2 (lower is better)
Translates to: LGSVQPSPGFRLPVLTRGQSRVS*EERWWR
Trigger: TCGCCACCAGCGTTCCTCCCAGGACACCCTTGACTG...GCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378750.10
3UTR-3UTR GCA 90 bp GACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATGTCAGCAGCTTCTaGTGGGACAGCGACACAGGC +
Preference number: 2 (lower is better)
Translates to: DEGDDKPAAHFTPHLGSSHVSSF*WDSDTG
Trigger: GCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATG...GGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
3UTR-3UTR CCA 90 bp GGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGTCACCGCTTTCTGTGGGAGAGAGGTGCGGGCTGCAGTaGCATCGTCACAGGAGAGCG +
Preference number: 2 (lower is better)
Translates to: GEQLPGLHEVKSPLSVGERCGLQ*HRHRRA
Trigger: CGCTCTCCTGTGACGATGCCACTGCAGCCCGCACCT...CTCTCCCACAGAAAGCGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR CCA 90 bp CAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGCTGTGTGTGGGGCCTaGCCGGTAGGCACGGAGAGG +
Preference number: 2 (lower is better)
Translates to: QGLKCHLRGSQAHCSPGSAVCGA*PVGTER
Trigger: CCTCTCCGTGCCTACCGGCCAGGCCCCACACACAGC...AGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378750.10
3UTR-3UTR CCA 90 bp CTTGGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACGTCAGCAGCTTCTGCTaGGACAGCGACACAGGCAAC +
Preference number: 2 (lower is better)
Translates to: LGQLDEGDDKPAAHFTPHVSSFC*DSDTGN
Trigger: GTTGCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGAC...GTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
3UTR-3UTR TCA 90 bp GAAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCGCTTCCCGGGCTCCATaGGGTGAAGTCACCGCTTTC +
Preference number: 2 (lower is better)
Translates to: EDTLGSVQPSPGFRLPVLASRAP*GEVTAF
Trigger: GAAAGCGGTGACTTCACCTCATGGAGCCCGGGAAGC...GAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR CCA 90 bp CGCAGTACAGCCTTGGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTATCGGCGAATCGACCTaGACGGGTCTTCTCAAGCAC +
Preference number: 2 (lower is better)
Translates to: RSTALASWTRAMTSQRPTIGEST*TGLLKH
Trigger: GTGCTTGAGAAGACCCGTCCAGGTCGATTCGCCGAT...AGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525229.5
3UTR-3UTR CCA 90 bp AGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGTCAGCAGCTTCTGCTaGGACAGCGACACAGGCAAC +
Preference number: 2 (lower is better)
Translates to: SWTRAMTSQRPTSPHTLAVSSFC*DSDTGN
Trigger: GTTGCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGAC...TGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
3UTR-3UTR TCA 90 bp ATCTCCATGAACACCTCCACGCACTCCAGCACGCTCAGCCATGTCAGCAGCTTCCAGCGATCACTACCCTaGCTCCGCAGGGAAGGGGGC +
Preference number: 2 (lower is better)
Translates to: ISMNTSTHSSTLSHVSSFQRSLP*LRREGG
Trigger: GCCCCCTTCCCTGCGGAGTCAGGGTAGTGATCGCTG...GAAGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGTGGAGGTGTTCATGGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525229.5
3UTR-3UTR GCA 90 bp CGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACCTCCACGCATGTCAGCAGCTTCTaGTGGGACAGCGACACAGGC +
Preference number: 2 (lower is better)
Translates to: RPTSPHTLAAPISMNTSTHVSSF*WDSDTG
Trigger: GCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATG...CGTGGAGGTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
3UTR-3UTR CCA 90 bp AGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGATGTGGGAGAGGAGCCTaGATCCCACTCCTAGTGAAG +
Preference number: 2 (lower is better)
Translates to: SVQPSPGFRLPVLTRGQRCGRGA*IPLLVK
Trigger: CTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACA...TCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR CCA 90 bp CAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTAAGTCACCGCTTTCTGTaGGAGAGGAGCCTGGATCCC +
Preference number: 2 (lower is better)
Translates to: QASCPHQGPAREQQCSLLSHRFL*ERSLDP
Trigger: GGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACT...TAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR CAA 90 bp TCTCTGTCCAGTGGAACGATAGGGGGTGAAGTCTGGAGGCCAGCCTaGAACCAGAGCAGCAGGAGCATCCGCAGTACAGCCTTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SLSSGTIGGEVWRPA*NQSSRSIRSTALAS
Trigger: GCTGGCCAAGGCTGTACTGCGGATGCTCCTGCTGCTCTGGTTCAAGGCTGGCCTCCAGACTTCACCCCCTATCGTTCCACTGGACAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525229.5
3UTR-3UTR TCA 90 bp GAGGATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCCCGGGCTCCATGAGGTaGAGTCACCGCTTTCTGTGG +
Preference number: 2 (lower is better)
Translates to: EDAGLKVPLAWEPGSLFTPGSMR*SHRFLW
Trigger: CCACAGAAAGCGGTGACTTCACCTCATGGAGCCCGG...GGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR CCA 90 bp CTTCCCGGGCTCCATGAGGTGAAGTCACCGCTTTCTGTGGGAGAGGAGCCTGGAAGTCACCGCTTTCTGTaGGAGAGGAGCCTGGATCCC +
Preference number: 2 (lower is better)
Translates to: LPGLHEVKSPLSVGEEPGSHRFL*ERSLDP
Trigger: GGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACT...TCCAGGCTCCTCTCCCACAGAAAGCGGTGACTTCACCTCATGGAGCCCGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR CCA 90 bp ATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCCAGTGTTCGCTCCTATaGCTGCCGAGGCGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: MQGLKCHLRGSQAHCSPGQCSLL*LPRRAA
Trigger: AGCTGCTCGCCTCGGCAGCCATAGGAGCGAACACTG...GCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR CCA 90 bp AGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATAGCCAGAAGACACGCTaGGCAGCGTTCAGCCATCAC +
Preference number: 2 (lower is better)
Translates to: RLPVLTRGQRESSSVRSYSQKTR*AAFSHH
Trigger: GTGATGGCTGAACGCTGCCCAGCGTGTCTTCTGGCT...ATAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR TCA 90 bp TGGGTCTCTCTGTCCAGTGGAACGATAGGGGGTGAAGTCTGGAGGCCAGCCTTGAGAGTACACCAGCTCTaGCAGCTCGTGCGAATCGGC +
Preference number: 2 (lower is better)
Translates to: WVSLSSGTIGGEVWRPALRVHQL*QLVRIG
Trigger: GCCGATTCGCACGAGCTGTCAGAGCTGGTGTACTCT...CAAGGCTGGCCTCCAGACTTCACCCCCTATCGTTCCACTGGACAGAGAGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525229.5
3UTR-3UTR CCA 90 bp GAGGATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGCCAGAAGACACGCTaGGCAGCGTTCAGCCATCAC +
Preference number: 2 (lower is better)
Translates to: EDAGLKVPLAWEPGSLFTSQKTR*AAFSHH
Trigger: GTGATGGCTGAACGCTGCCCAGCGTGTCTTCTGGCT...GGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR CCA 90 bp GACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCTGTGACAGCAGTCACTaGGCAAACACTCTTGAGGTA +
Preference number: 2 (lower is better)
Translates to: DEGDDKPAAHFTPHLGSSCDSSH*ANTLEV
Trigger: TACCTCAAGAGTGTTTGCCCAGTGACTGCTGTCACA...GGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529030.1
3UTR-3UTR CCA 90 bp CCACTCCTAGTGAAGGCTTCTTGGCCCAGCAGTGACAAGGTGCGGGCTGCAGTGCTAGTGAAGGCTTCTTaGCCCAGCAGTGACAAGGTG +
Preference number: 2 (lower is better)
Translates to: PLLVKASWPSSDKVRAAVLVKAS*PSSDKV
Trigger: CACCTTGTCACTGCTGGGCCAAGAAGCCTTCACTAG...CACTGCAGCCCGCACCTTGTCACTGCTGGGCCAAGAAGCCTTCACTAGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR CAA 90 bp AAAGCCTTTTACTCTCAACCGAGGATGCAGGGCTTAAAGTGCCACTaGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCACAGGG +
Preference number: 2 (lower is better)
Translates to: KAFYSQPRMQGLKCH*RGSQAHCSPGSVTG
Trigger: CCCTGTGACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGAGTAAAAGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR TCA 90 bp GACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAAATTCTTTCAGGACTGTaGCAGCAGTCACTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: DKPAAHFTPHLGSSHLHEILSGL*QQSLGK
Trigger: TTTGCCCAGTGACTGCTGTCACAGTCCTGAAAGAAT...TTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529030.1
3UTR-3UTR GCA 90 bp AGGAGCATCCGCAGTACAGCCTTGGCCAGCTGGACGAGGGCGATGACAAGCCAGAGGCAGAGTACACTCTaGTTTTCAAAACCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: RSIRSTALASWTRAMTSQRQSTL*FSKPSA
Trigger: TGCACTGGGTTTTGAAAAGCAGAGTGTACTCTGCCT...CTGGCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGATGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528674.5
3UTR-3UTR TCA 90 bp TCCATGAACACCTCCACGCACTCCAGCACGCTCAGCCATGTCAGCAGCTTCTGCCTGGGCAAACACTCTTaGGGTAGTTACAATCTGGGA +
Preference number: 2 (lower is better)
Translates to: SMNTSTHSSTLSHVSSFCLGKHS*GSYNLG
Trigger: TCCCAGATTGTAACTACCTCAAGAGTGTTTGCCCAG...GCAGAAGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGTGGAGGTGTTCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529030.1
3UTR-3UTR CCA 90 bp GATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAGGTAGTTACAATCTaGGAATCCTGGAATCTGGGA +
Preference number: 2 (lower is better)
Translates to: DDKPAAHFTPHLGSSHLHEVVTI*ESWNLG
Trigger: TCCCAGATTCCAGGATTCCCAGATTGTAACTACCTC...ATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529030.1
3UTR-3UTR GCA 90 bp CGTAGGATCCCGTCATTGAGCAGCACAAGCAGGTTAGAGGCAGAGTACACTCTGAGGCAGAGTACACTCTaGTTTTCAAAACCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: RRIPSLSSTSRLEAEYTLRQSTL*FSKPSA
Trigger: TGCACTGGGTTTTGAAAAGCAGAGTGTACTCTGCCT...CAGAGTGTACTCTGCCTCTAACCTGCTTGTGCTGCTCAATGACGGGATCCTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
3UTR CCA 72 bp CCTGGGAGGAACGCTGGTGGCGACCAGGGCTGTGTGTaGGGCCTGGCCGGTAGGCACGGAGAGGCCGCACGC +
Preference number: 3 (lower is better)
Translates to: PGRNAGGDQGCV*GLAGRHGEAAR
Trigger: GCGTGCGGCCTCTCCGTGCCTACCGGCCAGGCCCCACACACAGCCCTGGTCGCCACCAGCGTTCCTCCCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378750.10
3UTR CCA 72 bp AGGAGAGCGCAGTCAAGGGTGTCCTGGGAGGAACGCTaGTGGCGACCAGGGCTGTGTGTGGGGCCTGGCCGG +
Preference number: 3 (lower is better)
Translates to: RRAQSRVSWEER*WRPGLCVGPGR
Trigger: CCGGCCAGGCCCCACACACAGCCCTGGTCGCCACCAGCGTTCCTCCCAGGACACCCTTGACTGCGCTCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378750.10
3UTR GCA 72 bp GGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATGGCTaGCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTG +
Preference number: 3 (lower is better)
Translates to: GQRESSSVRSYG*RGEQLPGLHEV
Trigger: CACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAACACTGCTGCTCTCTCGCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR CCA 72 bp AAGGGGCAGACGGAGGGCCCCAGCCAGAAGACACGCTaGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTC +
Preference number: 3 (lower is better)
Translates to: KGQTEGPSQKTR*AAFSHHPGSGF
Trigger: GAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTTCTGGCTGGGGCCCTCCGTCTGCCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR TCA 72 bp GCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTaGAGTCACCGCTTTCTGTGGGAGAGGAGCCTGGAT +
Preference number: 3 (lower is better)
Translates to: AAEASSFPGSMR*SHRFLWERSLD
Trigger: ATCCAGGCTCCTCTCCCACAGAAAGCGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR CCA 72 bp TGGCATCGTCACAGGAGAGCGCAGTCAAGGGTGTCCTaGGAGGAACGCTGGTGGCGACCAGGGCTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: WHRHRRAQSRVS*EERWWRPGLCV
Trigger: CACACACAGCCCTGGTCGCCACCAGCGTTCCTCCCAGGACACCCTTGACTGCGCTCTCCTGTGACGATGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378750.10
3UTR-3UTR CAA 90 bp GGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTACTTCACCCCACACCTaGGCAGCTCCCATCTCCATG +
Preference number: 3 (lower is better)
Translates to: GQLDEGDDKPAAHFTPHLTSPHT*AAPISM
Trigger: CATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGT...AAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
3UTR CCA 72 bp CTTCTTGGCCCAGCAGTGACAAGGTGCGGGCTGCAGTaGCATCGTCACAGGAGAGCGCAGTCAAGGGTGTCC +
Preference number: 3 (lower is better)
Translates to: LLGPAVTRCGLQ*HRHRRAQSRVS
Trigger: GGACACCCTTGACTGCGCTCTCCTGTGACGATGCCACTGCAGCCCGCACCTTGTCACTGCTGGGCCAAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378750.10
3UTR-3UTR CAA 90 bp GCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGCGTAGGATCCCGTCATaGAGCAGCACAAGCAGGTTA +
Preference number: 3 (lower is better)
Translates to: ASWTRAMTSQRPTSPHTLRRIPS*SSTSRL
Trigger: TAACCTGCTTGTGCTGCTCAATGACGGGATCCTACG...CAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
3UTR CCA 72 bp AGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTTaGCCCAGCAGTGACAAGGTGCGGGCTGCAGTGGCA +
Preference number: 3 (lower is better)
Translates to: RGAWIPLLVKAS*PSSDKVRAAVA
Trigger: TGCCACTGCAGCCCGCACCTTGTCACTGCTGGGCCAAGAAGCCTTCACTAGGAGTGGGATCCAGGCTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR-3UTR CAA 90 bp ACCAGAGCAGCAGGAGCATCCGCAGTACAGCCTTGGCCAGCTGGACGAGGGCGACGTAGGATCCCGTCATaGAGCAGCACAAGCAGGTTA +
Preference number: 3 (lower is better)
Translates to: TRAAGASAVQPWPAGRGRRRIPS*SSTSRL
Trigger: TAACCTGCTTGTGCTGCTCAATGACGGGATCCTACG...TCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGATGCTCCTGCTGCTCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
3UTR-3UTR CAA 90 bp AAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACCGTAGGATCCCGTCATaGAGCAGCACAAGCAGGTTA +
Preference number: 3 (lower is better)
Translates to: KPAAHFTPHLGSSHLHEHRRIPS*SSTSRL
Trigger: TAACCTGCTTGTGCTGCTCAATGACGGGATCCTACG...GTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
3UTR-3UTR CAA 90 bp AGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACCCTGGGAGATCTAGACTaGAATCTTGGTTCTGGGACC +
Preference number: 3 (lower is better)
Translates to: SQRPTSPHTLAAPISMNTLGDLD*NLGSGT
Trigger: GGTCCCAGAACCAAGATTCAAGTCTAGATCTCCCAG...GGTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529030.1
3UTR GCA 72 bp ACGCACTCCAGCACGCTCAGCCATGTCAGCAGCTTCTaGTGGGACAGCGACACAGGCAACTTTTTCCGAAGC +
Preference number: 3 (lower is better)
Translates to: THSSTLSHVSSF*WDSDTGNFFRS
Trigger: GCTTCGGAAAAAGTTGCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
3UTR CCA 72 bp TCAACCGAGGATGCAGGGCTTAAAGTGCCACTTGCGTaGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCAC +
Preference number: 3 (lower is better)
Translates to: STEDAGLKVPLA*EPGSLFTRLCH
Trigger: GTGACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR GCA 72 bp AGGTTAGAGGCAGAGTACACCAGCTCTGACAGCTCGTaGGAATCGGCGAATCGACCTGGACGGGTCTTCTCA +
Preference number: 3 (lower is better)
Translates to: RLEAEYTSSDSS*ESANRPGRVFS
Trigger: TGAGAAGACCCGTCCAGGTCGATTCGCCGATTCGCACGAGCTGTCAGAGCTGGTGTACTCTGCCTCTAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525229.5
3UTR GCA 72 bp GCCTTTTACTCTCAACCGAGGATGCAGGGCTTAAAGTaGCACTTGCGTGGGAGCCAGGCTCACTGTTCACCA +
Preference number: 3 (lower is better)
Translates to: AFYSQPRMQGLK*HLRGSQAHCSP
Trigger: TGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGAGTAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
3UTR CCA 72 bp CCCAGTGCATTCTTTCAGGACTGTGACAGCAGTCACTaGGCAAACACTCTTGAGGTAGTTACAATCTGGGAA +
Preference number: 3 (lower is better)
Translates to: PSAFFQDCDSSH*ANTLEVVTIWE
Trigger: TTCCCAGATTGTAACTACCTCAAGAGTGTTTGCCCAGTGACTGCTGTCACAGTCCTGAAAGAATGCACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529030.1
3UTR CCA 72 bp GCAAACACTCTTGAGGTAGTTACAATCTGGGAATCCTaGAATCTGGGAGATCTAGACTTGAATCTTGGTTCT +
Preference number: 3 (lower is better)
Translates to: ANTLEVVTIWES*NLGDLDLNLGS
Trigger: AGAACCAAGATTCAAGTCTAGATCTCCCAGATTCCAGGATTCCCAGATTGTAACTACCTCAAGAGTGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529030.1
CDS-3UTR GCA 90 bp CCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATGGCTGCCGAGGCGAGCTGGGGAGCTCCCCAGTaGCTGGAGTGCAGGGACGGC +
Preference number: 4 (lower is better)
Translates to: PGASERAAVFAPMAAEASWGAPQ*LECRDG
Trigger: GCCGTCCCTGCACTCCAGGCACTGGGGAGCTCCCCA...GCTCGCCTCGGCAGCCATAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp CCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATGGCTGCCGAGGCGAGCGCACTCAGCTCCTCGTaGTGCTGCTGCTGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: PGASERAAVFAPMAAEASALSSS*CCCCRP
Trigger: GGGACGGCAGCAGCAGCATCACGAGGAGCTGAGTGC...GCTCGCCTCGGCAGCCATAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp TGGCCCAGCAGTGACAAGGTGCGGGCTGCAGTGGCATCGTCACAGGAGAGCGCACCCACAGGCCCAGGCTaGGCAAGTGCAGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: WPSSDKVRAAVASSQESAPTGPG*ASAAAA
Trigger: GGCCGCTGCTGCACTTGCTCAGCCTGGGCCTGTGGG...TGCGCTCTCCTGTGACGATGCCACTGCAGCCCGCACCTTGTCACTGCTGGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GTTCGCTCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGCGTCCCTCCCGCTGCTaGGGAGCTCCCCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VRSYGCRGEQLPGLHEVKRPSRC*GAPQCL
Trigger: CAGGCACTGGGGAGCTCCCCAGCAGCGGGAGGGACG...CTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp ACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTCGTCCCTCCCGCTGCTaGGGAGCTCCCCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TRVQASCPHQGPAREQQCRPSRC*GAPQCL
Trigger: CAGGCACTGGGGAGCTCCCCAGCAGCGGGAGGGACG...ACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGGACCAGGGCTGTGTGTaGGGCCTGGCCGGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: AITRVQASCPHQGPAREQDQGCV*GLAGRH
Trigger: GTGCCTACCGGCCAGGCCCCACACACAGCCCTGGTC...CTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp CACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGAGGCTGGCAACGCCATaGCCTGGGGCTGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HPGSGFLSSPGASERAAVRLATP*PGAARA
Trigger: GGCTCTGGCAGCCCCAGGCCATGGCGTTGCCAGCCT...CACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp CAGAAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCGCCGTGGCGGCCGGGTaGCGAGTCACGTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: QKTRWAAFSHHPGSGFLSAVAAG*RVTYSW
Trigger: CCAGGAGTACGTGACTCGTCACCCGGCCGCCACGGC...GGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp CAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTAGCCGTGGCGGCCGGGTaGCGAGTCACGTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: QASCPHQGPAREQQCSLLAVAAG*RVTYSW
Trigger: CCAGGAGTACGTGACTCGTCACCCGGCCGCCACGGC...TAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp AGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCCCACAGGCCCAGGCTaGGCAAGTGCAGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: RHAGQRSAITRVQASCPHPTGPG*ASAAAA
Trigger: GGCCGCTGCTGCACTTGCTCAGCCTGGGCCTGTGGG...GTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp GCCTTGGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACTGAAGCCCCGCACTaGTGTCTCCAGCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: ALASWTRAMTSQRPTSPHTEAPH*CLQLGR
Trigger: ACGGCCCAGCTGGAGACAGCAGTGCGGGGCTTCAGT...GTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS-3UTR GCA 90 bp CTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCCCCAGTGCCTGGAGTaGAGGGACGGCGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LGSVQPSPGFRLPVLTRGPQCLE*RDGVFW
Trigger: CCAGAACACGCCGTCCCTGCACTCCAGGCACTGGGG...GCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp TGGAGGCCAGCCTTGAACCAGAGCAGCAGGAGCATCCGCAGTACAGCCTTGGCCCAGGCTGCGGCGCCCTaGTTCCTGCGCCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: WRPALNQSSRSIRSTALAQAAAP*FLRPPS
Trigger: GGAAGGAGGGCGCAGGAAGCAGGGCGCCGCAGCCTG...GGCCAAGGCTGTACTGCGGATGCTCCTGCTGCTCTGGTTCAAGGCTGGCCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528674.5
CDS-3UTR CCA 90 bp ACCAGAGCAGCAGGAGCATCCGCAGTACAGCCTTGGCCAGCTGGACGAGGGCGATCTCCAGCTGGGCCGTaGCGGCCGGGTGACGAGTCA +
Preference number: 4 (lower is better)
Translates to: TRAAGASAVQPWPAGRGRSPAGP*RPGDES
Trigger: TGACTCGTCACCCGGCCGCCACGGCCCAGCTGGAGA...TCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGATGCTCCTGCTGCTCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS-3UTR CCA 90 bp CCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATGGCTGCCGAGGCGAGCTCCGCAGTACAGCCTTaGCCAGCTGGACGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: PGASERAAVFAPMAAEASSAVQP*PAGRGR
Trigger: TCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGA...GCTCGCCTCGGCAGCCATAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp TGTGTGTGGGGCCTGGCCGGTAGGCACGGAGAGGCCGCACGCTGGGACGCTGCCACAAAAACTCTGCGATaGTCTCCTGCAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: CVWGLAGRHGEAARWDAATKTLR*SPAAPG
Trigger: CCCTGGGGCTGCAGGAGACCATCGCAGAGTTTTTGT...GGCAGCGTCCCAGCGTGCGGCCTCTCCGTGCCTACCGGCCAGGCCCCACACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378750.10
CDS-3UTR CCA 90 bp GGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATGGCTGCCGAGGCGAGCAGCTCCAACGCCAGGGACGTaGTCGGCCAGCAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: GPAREQQCSLLWLPRRAAPTPGT*SASNWS
Trigger: GCTCCAGTTGCTGGCCGACCACGTCCCTGGCGTTGG...AGCTGCTCGCCTCGGCAGCCATAGGAGCGAACACTGCTGCTCTCTCGCTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp ACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTGACCAGGGCTGTGTGTaGGGCCTGGCCGGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: TRVQASCPHQGPAREQQCDQGCV*GLAGRH
Trigger: GTGCCTACCGGCCAGGCCCCACACACAGCCCTGGTC...ACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp ACCAGAGCAGCAGGAGCATCCGCAGTACAGCCTTGGCCAGCTGGACGAGGGCGAGCTGGACGAGGGCGATaGCAAGCCAGCGGCCCACTT +
Preference number: 4 (lower is better)
Translates to: TRAAGASAVQPWPAGRGRAGRGR*QASGPL
Trigger: AAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGC...TCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGATGCTCCTGCTGCTCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS-3UTR TCA 90 bp GAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATGTAGCCCTTAGCAACTaGGGGCCCAAACCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: EGDDKPAAHFTPHLGSSHVALSN*GPKPGP
Trigger: GGGGCCGGGTTTGGGCCCTCAGTTGCTAAGGGCTAC...ATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp ACCAGAGCAGCAGGAGCATCCGCAGTACAGCCTTGGCCAGCTGGACGAGGGCGACAGCGATCACTACCCTaGCTCCGCAGGGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TRAAGASAVQPWPAGRGRQRSLP*LRREGG
Trigger: GCCCCCTTCCCTGCGGAGTCAGGGTAGTGATCGCTG...TCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGATGCTCCTGCTGCTCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS-3UTR GCA 90 bp CCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCACTGAAGCCCCGCACTaGTGTCTCCAGCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: PSPGFRLPVLTRGQRESSTEAPH*CLQLGR
Trigger: ACGGCCCAGCTGGAGACAGCAGTGCGGGGCTTCAGT...GCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp GAAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCTGGGGAGCTCCCCAGTaGCTGGAGTGCAGGGACGGC +
Preference number: 4 (lower is better)
Translates to: EDTLGSVQPSPGFRLPVLWGAPQ*LECRDG
Trigger: GCCGTCCCTGCACTCCAGGCACTGGGGAGCTCCCCA...GAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp TATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGTCACCGCTTTCTCCAGCTGGGCCGTaGCGGCCGGGTGACGAGTCA +
Preference number: 4 (lower is better)
Translates to: YGCRGEQLPGLHEVKSPLSPAGP*RPGDES
Trigger: TGACTCGTCACCCGGCCGCCACGGCCCAGCTGGAGA...AAGCGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATGTCTCCAGCTGGGCCGTaGCGGCCGGGTGACGAGTCA +
Preference number: 4 (lower is better)
Translates to: GFLSSPGASERAAVFAPMSPAGP*RPGDES
Trigger: TGACTCGTCACCCGGCCGCCACGGCCCAGCTGGAGA...CATAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp TCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGAGGGACGGCGTGTTCTaGAGGGTTCGCACCACCCGG +
Preference number: 4 (lower is better)
Translates to: SAITRVQASCPHQGPARERDGVF*RVRTTR
Trigger: CCGGGTGGTGCGAACCCTCCAGAACACGCCGTCCCT...CTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp TCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGAGTAGAGCAGCAGGATaGTCCGGCGCCGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SAITRVQASCPHQGPARESRAAG*SGAAAP
Trigger: GGGAGCTGCGGCGCCGGACCATCCTGCTGCTCTACT...CTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp AGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACGCTGTGTGTGGGGCCTaGCCGGTAGGCACGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RHAGQRSAITRVQASCPHAVCGA*PVGTER
Trigger: CCTCTCCGTGCCTACCGGCCAGGCCCCACACACAGC...GTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCACAGGGAGAGGCTGGCAACGCCATaGCCTGGGGCTGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VPLAWEPGSLFTRLCHRERLATP*PGAARA
Trigger: GGCTCTGGCAGCCCCAGGCCATGGCGTTGCCAGCCT...CTCCCTGTGACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp GCGAATCGACCTGGACGGGTCTTCTCAAGCACAGCGATCACTACCCTGACTCCGGCCGTGGCGGCCGGGTaGCGAGTCACGTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: ANRPGRVFSSTAITTLTPAVAAG*RVTYSW
Trigger: CCAGGAGTACGTGACTCGTCACCCGGCCGCCACGGC...CGGAGTCAGGGTAGTGATCGCTGTGCTTGAGAAGACCCGTCCAGGTCGATTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS-3UTR TCA 90 bp AGTGTTCGCTCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGTCGCACCACCCGGTTTaGCCGCTTCCCCACGTAGGA +
Preference number: 4 (lower is better)
Translates to: SVRSYGCRGEQLPGLHEVSHHPV*PLPHVG
Trigger: TCCTACGTGGGGAAGCGGTCAAACCGGGTGGTGCGA...CACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp GACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCGCTTCTTCCCAGCTCTaGCAGCTCGTGCGAATCGGC +
Preference number: 4 (lower is better)
Translates to: DEGDDKPAAHFTPHLGSSASSQL*QLVRIG
Trigger: GCCGATTCGCACGAGCTGTCAGAGCTGGGAAGAAGC...GGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp AGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAACTGAAGCCCCGCACTaGTGTCTCCAGCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: SWTRAMTSQRPTSPHTLATEAPH*CLQLGR
Trigger: ACGGCCCAGCTGGAGACAGCAGTGCGGGGCTTCAGT...TGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000529030.1
CDS-3UTR GCA 90 bp TCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGTCACCGACCATCCGGGGGCTGTaGCTGGGTCTCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SYGCRGEQLPGLHEVKSPTIRGL*LGLSVQ
Trigger: CTGGACAGAGAGACCCAGGCACAGCCCCCGGATGGT...CGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp GGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTTGGCCCAGCAGTGACAAGGTGTGCCGTCCCTCCCGCTaGTGGGGAGCTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GAWIPLLVKASWPSSDKVCRPSR*WGAPQC
Trigger: GCACTGGGGAGCTCCCCAGCAGCGGGAGGGACGGCA...CACCTTGTCACTGCTGGGCCAAGAAGCCTTCACTAGGAGTGGGATCCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp CAGAAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCCCCAGGCTGAGCAAGTaGAGCAGCGGCCGGGCAATG +
Preference number: 4 (lower is better)
Translates to: QKTRWAAFSHHPGSGFLSPRLSK*SSGRAM
Trigger: CATTGCCCGGCCGCTGCTGCACTTGCTCAGCCTGGG...GGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp GTTCGCTCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGGTTCGCTCCTATGGCTaGCGAGGCGAGCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: VRSYGCRGEQLPGLHEVKVRSYG*RGEQLP
Trigger: GGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAAC...CTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp GAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATGCAGCTTCTCCATCCTaGCCTCGGCACCGACAGACC +
Preference number: 4 (lower is better)
Translates to: EGDDKPAAHFTPHLGSSHAASPS*PRHRQT
Trigger: GGTCTGTCGGTGCCGAGGGCAGGATGGAGAAGCTGC...ATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp CTTGGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACGGTCAGGGTGGCACCTaGCAGCAGGTAACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LGQLDEGDDKPAAHFTPHGQGGT*QQVTEA
Trigger: GGCTTCAGTTACCTGCTGGCAGGTGCCACCCTGACC...GTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS-3UTR CCA 90 bp GGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCTCCGCAGTACAGCCTTaGCCAGCTGGACGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: GDDKPAAHFTPHLGSSHLSAVQP*PAGRGR
Trigger: TCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGA...GAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS-3UTR CCA 90 bp GTGAAGGCTTCTTGGCCCAGCAGTGACAAGGTGCGGGCTGCAGTGGCATCGTCAGCTGTGTGTGGGGCCTaGCCGGTAGGCACGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VKASWPSSDKVRAAVASSAVCGA*PVGTER
Trigger: CCTCTCCGTGCCTACCGGCCAGGCCCCACACACAGC...TGACGATGCCACTGCAGCCCGCACCTTGTCACTGCTGGGCCAAGAAGCCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp TCGTCACAGGAGAGCGCAGTCAAGGGTGTCCTGGGAGGAACGCTGGTGGCGACCAGGTGCGGGCTGCAGTaGCATCGTCACAGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: SSQESAVKGVLGGTLVATRCGLQ*HRHRRA
Trigger: CGCTCTCCTGTGACGATGCCACTGCAGCCCGCACCT...GGTCGCCACCAGCGTTCCTCCCAGGACACCCTTGACTGCGCTCTCCTGTGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378750.10
CDS-3UTR CCA 90 bp CAGAAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCCTGTCACAGGGAGGCTaGCAACGCCATGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QKTRWAAFSHHPGSGFLSLSQGG*QRHGLG
Trigger: CCCCAGGCCATGGCGTTGCCAGCCTCCCTGTGACAG...GGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp CTTCTCAAGCACAGCGATCACTACCCTGACTCCGCAGGGAAGGGGGCCACTGGGAGGGAAGGGGGCCACTaGGGTCATAGGTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LLKHSDHYPDSAGKGATGREGGH*GHRSGP
Trigger: GGGCCCTGACCTATGACCCCAGTGGCCCCCTTCCCT...CCCAGTGGCCCCCTTCCCTGCGGAGTCAGGGTAGTGATCGCTGTGCTTGAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS-3UTR TCA 90 bp GCTGGGACAGCGACACAGGCAACTTTTTCCGAAGCTCCTTCCGTAGGATCCCGTGCCGTGGCGGCCGGGTaGCGAGTCACGTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGTATQATFSEAPSVGSRAVAAG*RVTYSW
Trigger: CCAGGAGTACGTGACTCGTCACCCGGCCGCCACGGC...ACGGGATCCTACGGAAGGAGCTTCGGAAAAAGTTGCCTGTGTCGCTGTCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000529030.1
CDS-3UTR TCA 90 bp TCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCTGCCAGCAGGTAACTaGAGCCCCGCACTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SAITRVQASCPHQGPARELPAGN*SPALLS
Trigger: AGACAGCAGTGCGGGGCTTCAGTTACCTGCTGGCAG...CTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp GCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGAGAGTACACCAGCTCTaGCAGCTCGTGCGAATCGGC +
Preference number: 4 (lower is better)
Translates to: AITRVQASCPHQGPAREQRVHQL*QLVRIG
Trigger: GCCGATTCGCACGAGCTGTCAGAGCTGGTGTACTCT...CTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp CAGTACAGCCTTGGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCTCTGGAGGCCAGCCTTaGACCAGAGCAGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QYSLGQLDEGDDKPAAHFSGGQP*TRAAGA
Trigger: TGCTCCTGCTGCTCTGGTTCAAGGCTGGCCTCCAGA...GAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGCTGTACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS-3UTR TCA 90 bp ATCCGCAGTACAGCCTTGGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCTGGAACGATAGGGGGTaGAGTCTGGAGGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: IRSTALASWTRAMTSQRPWNDRG*SLEASL
Trigger: AAGGCTGGCCTCCAGACTTCACCCCCTATCGTTCCA...GGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS-3UTR TCA 90 bp AGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATGCACTCAGCTCCTCGTaGTGCTGCTGCTGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RLPVLTRGQRESSSVRSYALSSS*CCCCRP
Trigger: GGGACGGCAGCAGCAGCATCACGAGGAGCTGAGTGC...ATAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp ACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTTCTTGGCCCAGCAGTaGCAAGGTGCGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TRVQASCPHQGPAREQQCFLAQQ*QGAGCS
Trigger: ACTGCAGCCCGCACCTTGTCACTGCTGGGCCAAGAA...ACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp TCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGTCACCGGCTTCCCGGGCTCCATaGGGTGAAGTCACCGCTTTC +
Preference number: 4 (lower is better)
Translates to: SYGCRGEQLPGLHEVKSPASRAP*GEVTAF
Trigger: GAAAGCGGTGACTTCACCTCATGGAGCCCGGGAAGC...CGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp GCCTTGGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACGACTTGAAGAACCGGTaGACCACCCTTCACCCCATC +
Preference number: 4 (lower is better)
Translates to: ALASWTRAMTSQRPTSPHDLKNR*TTLHPI
Trigger: GATGGGGTGAAGGGTGGTTCACCGGTTCTTCAAGTC...GTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528674.5
CDS-3UTR GCA 90 bp CAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTAGTTCGCTCCTATGGCTaGCGAGGCGAGCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QASCPHQGPAREQQCSLLVRSYG*RGEQLP
Trigger: GGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAAC...TAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp AGGCCAGCCTTGAACCAGAGCAGCAGGAGCATCCGCAGTACAGCCTTGGCCAGCGGCCCGCCTCTTGGTTaGTTAACTTCCGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RPALNQSSRSIRSTALASGPPLG*LTSAGQ
Trigger: CTGGCCCGCGGAAGTTAAGCAACCAAGAGGCGGGCC...GCTGGCCAAGGCTGTACTGCGGATGCTCCTGCTGCTCTGGTTCAAGGCTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528674.5
CDS-3UTR CCA 90 bp CAGTGGCATCGTCACAGGAGAGCGCAGTCAAGGGTGTCCTGGGAGGAACGCTGGTCCGGGGGCTGTGCCTaGGTCTCTCTGTCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: QWHRHRRAQSRVSWEERWSGGCA*VSLSSG
Trigger: TCCACTGGACAGAGAGACCCAGGCACAGCCCCCGGA...CCAGCGTTCCTCCCAGGACACCCTTGACTGCGCTCTCCTGTGACGATGCCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378750.10
CDS-3UTR CCA 90 bp GTGAAGGCTTCTTGGCCCAGCAGTGACAAGGTGCGGGCTGCAGTGGCATCGTCAGAGCTCCCCAGTGCCTaGAGTGCAGGGACGGCGTGT +
Preference number: 4 (lower is better)
Translates to: VKASWPSSDKVRAAVASSELPSA*SAGTAC
Trigger: ACACGCCGTCCCTGCACTCCAGGCACTGGGGAGCTC...TGACGATGCCACTGCAGCCCGCACCTTGTCACTGCTGGGCCAAGAAGCCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp CACGCTGGGACGCTGCCGGAGTCAGTTTTATTAGGGAAGAGGGGCTCCCTGCCCTCCTGGGAGGAACGCTaGTGGCGACCAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HAGTLPESVLLGKRGSLPSWEER*WRPGLC
Trigger: ACACAGCCCTGGTCGCCACCAGCGTTCCTCCCAGGA...GGGCAGGGAGCCCCTCTTCCCTAATAAAACTGACTCCGGCAGCGTCCCAGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378750.10
CDS-3UTR CCA 90 bp CGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGACAGTCAAGGGTGTCCTaGGAGGAACGCTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: RSAITRVQASCPHQGPARQSRVS*EERWWR
Trigger: TCGCCACCAGCGTTCCTCCCAGGACACCCTTGACTG...TCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp AGTGTTCGCTCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGCAGTGTTCGCTCCTATaGCTGCCGAGGCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SVRSYGCRGEQLPGLHEVQCSLL*LPRRAA
Trigger: AGCTGCTCGCCTCGGCAGCCATAGGAGCGAACACTG...CACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp TCTCAACCGAGGATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACGCTGGACGAGGGCGATaGCAAGCCAGCGGCCCACTT +
Preference number: 4 (lower is better)
Translates to: SQPRMQGLKCHLRGSQAHAGRGR*QASGPL
Trigger: AAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGC...GTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp CTCCATGAACACCTCCACGCACTCCAGCACGCTCAGCCATGTCAGCAGCTTCTGGCTGGACGAGGGCGATaGCAAGCCAGCGGCCCACTT +
Preference number: 4 (lower is better)
Translates to: LHEHLHALQHAQPCQQLLAGRGR*QASGPL
Trigger: AAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGC...CAGAAGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGTGGAGGTGTTCATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp GTTCGCTCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGTGGAACGATAGGGGGTaGAGTCTGGAGGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: VRSYGCRGEQLPGLHEVKWNDRG*SLEASL
Trigger: AAGGCTGGCCTCCAGACTTCACCCCCTATCGTTCCA...CTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp GGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCACGCTGGGACGTTGTaGCCAGGCCAACGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GLKVPLAWEPGSLFTRLCHAGTL*PGQRQG
Trigger: TCCCTGGCGTTGGCCTGGTCACAACGTCCCAGCGTG...ACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241041.7
CDS-3UTR TCA 90 bp CACGCTGGGACGCTGCCGGAGTCAGTTTTATTAGGGAAGAGGGGCTCCCTGCCCCCGGGCTCCATGAGGTaGAGTCACCGCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HAGTLPESVLLGKRGSLPPGSMR*SHRFLW
Trigger: CCACAGAAAGCGGTGACTTCACCTCATGGAGCCCGG...GGGCAGGGAGCCCCTCTTCCCTAATAAAACTGACTCCGGCAGCGTCCCAGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378750.10
CDS-3UTR TCA 90 bp AGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACGCTTCCCGGGCTCCATaGGGTGAAGTCACCGCTTTC +
Preference number: 4 (lower is better)
Translates to: RHAGQRSAITRVQASCPHASRAP*GEVTAF
Trigger: GAAAGCGGTGACTTCACCTCATGGAGCCCGGGAAGC...GTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp AGAAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTACTGAAGCCCCGCACTaGTGTCTCCAGCTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: RRHAGQRSAITRVQASCPTEAPH*CLQLGR
Trigger: ACGGCCCAGCTGGAGACAGCAGTGCGGGGCTTCAGT...AGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp GTTCGCTCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGCATGTCAGCAGCTTCTaGTGGGACAGCGACACAGGC +
Preference number: 4 (lower is better)
Translates to: VRSYGCRGEQLPGLHEVKHVSSF*WDSDTG
Trigger: GCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATG...CTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp TCTCAACCGAGGATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACCCCCAGTGCCTGGAGTaGAGGGACGGCGTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SQPRMQGLKCHLRGSQAHPQCLE*RDGVFW
Trigger: CCAGAACACGCCGTCCCTGCACTCCAGGCACTGGGG...GTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp AAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACGGCCCGCCTCTTGGTTaGTTAACTTCCGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KPAAHFTPHLGSSHLHEHGPPLG*LTSAGQ
Trigger: CTGGCCCGCGGAAGTTAAGCAACCAAGAGGCGGGCC...GTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp AGCTCCTTCCGTAGGATCCCGTCATTGAGCAGCACAAGCAGGTTAGAGGCAGAGCAGGCTGCGGCGCCCTaGTTCCTGCGCCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SSFRRIPSLSSTSRLEAEQAAAP*FLRPPS
Trigger: GGAAGGAGGGCGCAGGAAGCAGGGCGCCGCAGCCTG...CTCTGCCTCTAACCTGCTTGTGCTGCTCAATGACGGGATCCTACGGAAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CCA 90 bp TGGCCCAGCAGTGACAAGGTGCGGGCTGCAGTGGCATCGTCACAGGAGAGCGCAGTCAGCAGCTTCTGCTaGGACAGCGACACAGGCAAC +
Preference number: 4 (lower is better)
Translates to: WPSSDKVRAAVASSQESAVSSFC*DSDTGN
Trigger: GTTGCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGAC...TGCGCTCTCCTGTGACGATGCCACTGCAGCCCGCACCTTGTCACTGCTGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp AAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACTCCGCAGTACAGCCTTaGCCAGCTGGACGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: KPAAHFTPHLGSSHLHEHSAVQP*PAGRGR
Trigger: TCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGA...GTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS-3UTR CCA 90 bp CAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTAGGGACGGCGTGTTCTaGAGGGTTCGCACCACCCGG +
Preference number: 4 (lower is better)
Translates to: QGLKCHLRGSQAHCSPGSRDGVF*RVRTTR
Trigger: CCGGGTGGTGCGAACCCTCCAGAACACGCCGTCCCT...AGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp AGAGAGCAGCAGTGTTCGCTCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTTCAGGAGGCTCAGGCTaGTCACGTCCACAACACCAG +
Preference number: 4 (lower is better)
Translates to: REQQCSLLWLPRRAASRASGGSG*SRPQHQ
Trigger: CTGGTGTTGTGGACGTGACCAGCCTGAGCCTCCTGA...AGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAACACTGCTGCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp CAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTAGTAGAGCAGCAGGATaGTCCGGCGCCGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QGLKCHLRGSQAHCSPGSSRAAG*SGAAAP
Trigger: GGGAGCTGCGGCGCCGGACCATCCTGCTGCTCTACT...AGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp AAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCATCCTGGGAGGAACGCTaGTGGCGACCAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KTRWAAFSHHPGSGFLSSSWEER*WRPGLC
Trigger: ACACAGCCCTGGTCGCCACCAGCGTTCCTCCCAGGA...TGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp AAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCAAGGTGCGGGCTGCAGTaGCATCGTCACAGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: KTRWAAFSHHPGSGFLSSRCGLQ*HRHRRA
Trigger: CGCTCTCCTGTGACGATGCCACTGCAGCCCGCACCT...TGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp TCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGTCACCGAGCCAGAAGACACGCTaGGCAGCGTTCAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: SYGCRGEQLPGLHEVKSPSQKTR*AAFSHH
Trigger: GTGATGGCTGAACGCTGCCCAGCGTGTCTTCTGGCT...CGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp CGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACCTCCACGAGAGTACACCAGCTCTaGCAGCTCGTGCGAATCGGC +
Preference number: 4 (lower is better)
Translates to: RPTSPHTLAAPISMNTSTRVHQL*QLVRIG
Trigger: GCCGATTCGCACGAGCTGTCAGAGCTGGTGTACTCT...CGTGGAGGTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS-3UTR TCA 90 bp GAAGTCACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTGCTGGACGAGGGCGATaGCAAGCCAGCGGCCCACTT +
Preference number: 4 (lower is better)
Translates to: EVTAFCGRGAWIPLLVKAAGRGR*QASGPL
Trigger: AAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGC...AGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp AGAAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTTCTGGAGGCCAGCCTTaGACCAGAGCAGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RRHAGQRSAITRVQASCPSGGQP*TRAAGA
Trigger: TGCTCCTGCTGCTCTGGTTCAAGGCTGGCCTCCAGA...AGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp AAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACTCTGGAGGCCAGCCTTaGACCAGAGCAGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KPAAHFTPHLGSSHLHEHSGGQP*TRAAGA
Trigger: TGCTCCTGCTGCTCTGGTTCAAGGCTGGCCTCCAGA...GTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS-3UTR TCA 90 bp GTGACAAGGTGCGGGCTGCAGTGGCATCGTCACAGGAGAGCGCAGTCAAGGGTGTGGAACGATAGGGGGTaGAGTCTGGAGGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: VTRCGLQWHRHRRAQSRVWNDRG*SLEASL
Trigger: AAGGCTGGCCTCCAGACTTCACCCCCTATCGTTCCA...CACCCTTGACTGCGCTCTCCTGTGACGATGCCACTGCAGCCCGCACCTTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378750.10
CDS-3UTR TCA 90 bp GAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATAGAAGGCTGAGGACTTaGAGAACCGGTGAACCACCC +
Preference number: 4 (lower is better)
Translates to: EGDDKPAAHFTPHLGSSHRRLRT*RTGEPP
Trigger: GGGTGGTTCACCGGTTCTTCAAGTCCTCAGCCTTCT...ATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp ACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACCTCCACGCACTCCCGCGGGCCAGAAGGCTaGGGACTTGAAGAACCGGTG +
Preference number: 4 (lower is better)
Translates to: TSPHTLAAPISMNTSTHSRGPEG*GLEEPV
Trigger: CACCGGTTCTTCAAGTCCTCAGCCTTCTGGCCCGCG...GGAGTGCGTGGAGGTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp GCCTTGAACCAGAGCAGCAGGAGCATCCGCAGTACAGCCTTGGCCAGCTGGACGCATGTCAGCAGCTTCTaGTGGGACAGCGACACAGGC +
Preference number: 4 (lower is better)
Translates to: ALNQSSRSIRSTALASWTHVSSF*WDSDTG
Trigger: GCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATG...CGTCCAGCTGGCCAAGGCTGTACTGCGGATGCTCCTGCTGCTCTGGTTCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS-3UTR GCA 90 bp CGCTCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGTCAATGCAGGGCTTAAAGTaGCACTTGCGTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RSYGCRGEQLPGLHEVKSMQGLK*HLRGSQ
Trigger: CTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCAT...TGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp TCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGTCACCGATGCAGGGCTTAAAGTaGCACTTGCGTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SYGCRGEQLPGLHEVKSPMQGLK*HLRGSQ
Trigger: CTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCAT...CGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp GGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCGCAGCTTCTCCATCCTaGCCTCGGCACCGACAGACC +
Preference number: 4 (lower is better)
Translates to: GLKCHLRGSQAHCSPGSVAASPS*PRHRQT
Trigger: GGTCTGTCGGTGCCGAGGGCAGGATGGAGAAGCTGC...GACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378750.10
CDS-3UTR CCA 90 bp AGCTCCTTCCGTAGGATCCCGTCATTGAGCAGCACAAGCAGGTTAGAGGCAGAGTCTCCAGCTGGGCCGTaGCGGCCGGGTGACGAGTCA +
Preference number: 4 (lower is better)
Translates to: SSFRRIPSLSSTSRLEAESPAGP*RPGDES
Trigger: TGACTCGTCACCCGGCCGCCACGGCCCAGCTGGAGA...CTCTGCCTCTAACCTGCTTGTGCTGCTCAATGACGGGATCCTACGGAAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000529030.1
CDS-3UTR CCA 90 bp AAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCAACAGCCTTGGCCAGCTaGACGAGGGCGATGACAAGC +
Preference number: 4 (lower is better)
Translates to: KTRWAAFSHHPGSGFLSSTALAS*TRAMTS
Trigger: GCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGCTGT...TGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GAGGATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCTCCGGGGGCTGTGCCTaGGTCTCTCTGTCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: EDAGLKVPLAWEPGSLFTSGGCA*VSLSSG
Trigger: TCCACTGGACAGAGAGACCCAGGCACAGCCCCCGGA...GGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp ACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTTGGGAGCTCCCCAGTGCCTaGAGTGCAGGGACGGCGTGT +
Preference number: 4 (lower is better)
Translates to: TAFCGRGAWIPLLVKASWELPSA*SAGTAC
Trigger: ACACGCCGTCCCTGCACTCCAGGCACTGGGGAGCTC...CCAAGAAGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp TCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGTCACCGACAAAAACTCTGCGATaGTCTCCTGCAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SYGCRGEQLPGLHEVKSPTKTLR*SPAAPG
Trigger: CCCTGGGGCTGCAGGAGACCATCGCAGAGTTTTTGT...CGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATGTCAGGAGGCTCAGGCTaGTCACGTCCACAACACCAG +
Preference number: 4 (lower is better)
Translates to: GFLSSPGASERAAVFAPMSGGSG*SRPQHQ
Trigger: CTGGTGTTGTGGACGTGACCAGCCTGAGCCTCCTGA...CATAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GAAGTCACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTGGAGAGGCCGCACGCTaGGACGTTGTGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EVTAFCGRGAWIPLLVKAGEAAR*DVVTRP
Trigger: TGGCCTGGTCACAACGTCCCAGCGTGCGGCCTCTCC...AGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241041.7
CDS-3UTR CCA 90 bp CCGAGGATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCATGGGAGGAACGCTGGTaGCGACCAGGGCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PRMQGLKCHLRGSQAHCSWEERW*RPGLCV
Trigger: CACACACAGCCCTGGTCGCCACCAGCGTTCCTCCCA...TGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp AGAAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCAGTCAAGGGTGTCCTaGGAGGAACGCTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: RRHAGQRSAITRVQASCPQSRVS*EERWWR
Trigger: TCGCCACCAGCGTTCCTCCCAGGACACCCTTGACTG...AGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp TCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAAGTCACCGTGTGGGAGAGGAGCCTaGATCCCACTCCTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SYGCRGEQLPGLHEVKSPCGRGA*IPLLVK
Trigger: CTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACA...CGGTGACTTCACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp AGAAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCAGTGTTCGCTCCTATaGCTGCCGAGGCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RRHAGQRSAITRVQASCPQCSLL*LPRRAA
Trigger: AGCTGCTCGCCTCGGCAGCCATAGGAGCGAACACTG...AGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp CACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTTGCTGTCACAGGGAGGCTaGCAACGCCATGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HRFLWERSLDPTPSEGFLLSQGG*QRHGLG
Trigger: CCCCAGGCCATGGCGTTGCCAGCCTCCCTGTGACAG...CAAGAAGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp TTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCACAGGAGAGGCCGCACGCTaGGACGCTGCCGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LKCHLRGSQAHCSPGSVTGEAAR*DAAGVS
Trigger: ACTGACTCCGGCAGCGTCCCAGCGTGCGGCCTCTCC...TGTGACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378750.10
CDS-3UTR GCA 90 bp GAAGTCACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTACCATCCGGGGGCTGTaGCTGGGTCTCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EVTAFCGRGAWIPLLVKATIRGL*LGLSVQ
Trigger: CTGGACAGAGAGACCCAGGCACAGCCCCCGGATGGT...AGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GTGAAGGCTTCTTGGCCCAGCAGTGACAAGGTGCGGGCTGCAGTGGCATCGTCATGGTCGGCCAGCAACTaGAGCAGGAAGAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: VKASWPSSDKVRAAVASSWSASN*SRKRIL
Trigger: CAGGATCCTCTTCCTGCTCCAGTTGCTGGCCGACCA...TGACGATGCCACTGCAGCCCGCACCTTGTCACTGCTGGGCCAAGAAGCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp CACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTTGTGGGAGGAACGCTGGTaGCGACCAGGGCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HRFLWERSLDPTPSEGFLWEERW*RPGLCV
Trigger: CACACACAGCCCTGGTCGCCACCAGCGTTCCTCCCA...CAAGAAGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCACAGGGAGTGTGGGAGAGGAGCCTaGATCCCACTCCTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: VPLAWEPGSLFTRLCHRECGRGA*IPLLVK
Trigger: CTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACA...CTCCCTGTGACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp CCGAGGATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCAAGAGTACACCAGCTCTaGCAGCTCGTGCGAATCGGC +
Preference number: 4 (lower is better)
Translates to: PRMQGLKCHLRGSQAHCSRVHQL*QLVRIG
Trigger: GCCGATTCGCACGAGCTGTCAGAGCTGGTGTACTCT...TGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp TCCTTCCGTAGGATCCCGTCATTGAGCAGCACAAGCAGGTTAGAGGCAGAGTACGCTGGACGAGGGCGATaGCAAGCCAGCGGCCCACTT +
Preference number: 4 (lower is better)
Translates to: SFRRIPSLSSTSRLEAEYAGRGR*QASGPL
Trigger: AAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGC...GTACTCTGCCTCTAACCTGCTTGTGCTGCTCAATGACGGGATCCTACGGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp GAAGTCACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTGGAGGCCAGCCTTaGACCAGAGCAGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: EVTAFCGRGAWIPLLVKASGGQP*TRAAGA
Trigger: TGCTCCTGCTGCTCTGGTTCAAGGCTGGCCTCCAGA...AGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp CACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTTGCCGGGCTCCATGAGGTaGAGTCACCGCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HRFLWERSLDPTPSEGFLPGSMR*SHRFLW
Trigger: CCACAGAAAGCGGTGACTTCACCTCATGGAGCCCGG...CAAGAAGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp AGCGACACAGGCAACTTTTTCCGAAGCTCCTTCCGTAGGATCCCGTCATTGAGCGTAGCCCTTAGCAACTaGGGGCCCAAACCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SDTGNFFRSSFRRIPSLSVALSN*GPKPGP
Trigger: GGGGCCGGGTTTGGGCCCTCAGTTGCTAAGGGCTAC...GCTCAATGACGGGATCCTACGGAAGGAGCTTCGGAAAAAGTTGCCTGTGTCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp ACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACCTCCACGCACTCCCTTCACCCCATCTCTTaGACCGCTTCCCACTCGGGT +
Preference number: 4 (lower is better)
Translates to: TSPHTLAAPISMNTSTHSLHPIS*TASHSG
Trigger: ACCCGAGTGGGAAGCGGTTCAAGAGATGGGGTGAAG...GGAGTGCGTGGAGGTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp AGCCATGTCAGCAGCTTCTGCTGGGACAGCGACACAGGCAACTTTTTCCGAAGCCGCGGGCCAGAAGGCTaGGGACTTGAAGAACCGGTG +
Preference number: 4 (lower is better)
Translates to: SHVSSFCWDSDTGNFFRSRGPEG*GLEEPV
Trigger: CACCGGTTCTTCAAGTCCTCAGCCTTCTGGCCCGCG...GCTTCGGAAAAAGTTGCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp ATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCCATGTCAGCAGCTTCTaGTGGGACAGCGACACAGGC +
Preference number: 4 (lower is better)
Translates to: MQGLKCHLRGSQAHCSPGHVSSF*WDSDTG
Trigger: GCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATG...GCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp GGGAGAAAAGCCTTTTACTCTCAACCGAGGATGCAGGGCTTAAAGTGCCACTTGTGCCGTCCCTCCCGCTaGTGGGGAGCTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GRKAFYSQPRMQGLKCHLCRPSR*WGAPQC
Trigger: GCACTGGGGAGCTCCCCAGCAGCGGGAGGGACGGCA...CAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGAGTAAAAGGCTTTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp CACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGAATGTACAAAAACTCTaGGATGGTCTCCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HPGSGFLSSPGASERAAVNVQKL*DGLLQP
Trigger: GGGCTGCAGGAGACCATCGCAGAGTTTTTGTACATT...CACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp TCTCTGTCCAGTGGAACGATAGGGGGTGAAGTCTGGAGGCCAGCCTTGAACCAGACAGCCTTGGCCAGCTaGACGAGGGCGATGACAAGC +
Preference number: 4 (lower is better)
Translates to: SLSSGTIGGEVWRPALNQTALAS*TRAMTS
Trigger: GCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGCTGT...CTGGTTCAAGGCTGGCCTCCAGACTTCACCCCCTATCGTTCCACTGGACAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS-3UTR CCA 90 bp TTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCACATCCGCAGTACAGCCTTaGCCAGCTGGACGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: LKCHLRGSQAHCSPGSVTSAVQP*PAGRGR
Trigger: TCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGA...TGTGACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp AGCCTTTTACTCTCAACCGAGGATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAACGCCAGGGACGTaGTCGGCCAGCAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLLSTEDAGLKVPLAWEPTPGT*SASNWS
Trigger: GCTCCAGTTGCTGGCCGACCACGTCCCTGGCGTTGG...CTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGAGTAAAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCACAGGGAGCTAGTGAAGGCTTCTTaGCCCAGCAGTGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: VPLAWEPGSLFTRLCHRELVKAS*PSSDKV
Trigger: CACCTTGTCACTGCTGGGCCAAGAAGCCTTCACTAG...CTCCCTGTGACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GAGGATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGTCACCGCTTTCTGTaGGAGAGGAGCCTGGATCCC +
Preference number: 4 (lower is better)
Translates to: EDAGLKVPLAWEPGSLFTSHRFL*ERSLDP
Trigger: GGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACT...GGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp CACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACCTCCACGCACTCCTTAGGCCCGCCTCTTaGTTGCTTAACTTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: HFTPHLGSSHLHEHLHALLRPAS*LLNFRG
Trigger: CCCGCGGAAGTTAAGCAACCAAGAGGCGGGCCTAAG...GAGTGCGTGGAGGTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CCA 90 bp GCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGTGTGACAGCAGTCACTaGGCAAACACTCTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: ASWTRAMTSQRPTSPHTLCDSSH*ANTLEV
Trigger: TACCTCAAGAGTGTTTGCCCAGTGACTGCTGTCACA...CAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp ATCTCCATGAACACCTCCACGCACTCCAGCACGCTCAGCCATGTCAGCAGCTTCTGGAACGATAGGGGGTaGAGTCTGGAGGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ISMNTSTHSSTLSHVSSFWNDRG*SLEASL
Trigger: AAGGCTGGCCTCCAGACTTCACCCCCTATCGTTCCA...GAAGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGTGGAGGTGTTCATGGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS-3UTR TCA 90 bp AGCCTTTTACTCTCAACCGAGGATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGTCGCACCACCCGGTTTaGCCGCTTCCCCACGTAGGA +
Preference number: 4 (lower is better)
Translates to: SLLLSTEDAGLKVPLAWESHHPV*PLPHVG
Trigger: TCCTACGTGGGGAAGCGGTCAAACCGGGTGGTGCGA...CTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGAGTAAAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp TTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCACATTCTTGGCCCAGCAGTaGCAAGGTGCGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LKCHLRGSQAHCSPGSVTFLAQQ*QGAGCS
Trigger: ACTGCAGCCCGCACCTTGTCACTGCTGGGCCAAGAA...TGTGACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp TCCATGAACACCTCCACGCACTCCAGCACGCTCAGCCATGTCAGCAGCTTCTGCGACTTGAAGAACCGGTaGACCACCCTTCACCCCATC +
Preference number: 4 (lower is better)
Translates to: SMNTSTHSSTLSHVSSFCDLKNR*TTLHPI
Trigger: GATGGGGTGAAGGGTGGTTCACCGGTTCTTCAAGTC...GCAGAAGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGTGGAGGTGTTCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp TCCATGAACACCTCCACGCACTCCAGCACGCTCAGCCATGTCAGCAGCTTCTGCAGAAGGCTGAGGACTTaGAGAACCGGTGAACCACCC +
Preference number: 4 (lower is better)
Translates to: SMNTSTHSSTLSHVSSFCRRLRT*RTGEPP
Trigger: GGGTGGTTCACCGGTTCTTCAAGTCCTCAGCCTTCT...GCAGAAGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGTGGAGGTGTTCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp AGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTTCTGGGACCATCAGTaGCTGTTCTCTAACCTCACT +
Preference number: 4 (lower is better)
Translates to: RAMTSQRPTSPHTLAAPIFWDHQ*LFSNLT
Trigger: AGTGAGGTTAGAGAACAGTCACTGATGGTCCCAGAA...GATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp GGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCATTCTTTCAGGACTGTaGCAGCAGTCACTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GDDKPAAHFTPHLGSSHLILSGL*QQSLGK
Trigger: TTTGCCCAGTGACTGCTGTCACAGTCCTGAAAGAAT...GAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp AGTGTTCGCTCCTATGGCTGCCGAGGCGAGCAGCTTCCCGGGCTCCATGAGGTGAATGTACAAAAACTCTaGGATGGTCTCCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SVRSYGCRGEQLPGLHEVNVQKL*DGLLQP
Trigger: GGGCTGCAGGAGACCATCGCAGAGTTTTTGTACATT...CACCTCATGGAGCCCGGGAAGCTGCTCGCCTCGGCAGCCATAGGAGCGAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GCCATGTCAGCAGCTTCTGCTGGGACAGCGACACAGGCAACTTTTTCCGAAGCTACAGCCTTGGCCAGCTaGACGAGGGCGATGACAAGC +
Preference number: 4 (lower is better)
Translates to: AMSAASAGTATQATFSEATALAS*TRAMTS
Trigger: GCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGCTGT...AGCTTCGGAAAAAGTTGCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS-3UTR CCA 90 bp GAAGTCACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTTGGTCGGCCAGCAACTaGAGCAGGAAGAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: EVTAFCGRGAWIPLLVKAWSASN*SRKRIL
Trigger: CAGGATCCTCTTCCTGCTCCAGTTGCTGGCCGACCA...AGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp TACTCTCAACCGAGGATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTAGCCAGAAGACACGCTaGGCAGCGTTCAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: YSQPRMQGLKCHLRGSQASQKTR*AAFSHH
Trigger: GTGATGGCTGAACGCTGCCCAGCGTGTCTTCTGGCT...AGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp GGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTTGGCCCAGCAGTGACAAGGTGAAAGTGCCACTTGCGTaGGAGCCAGGCTCACTGTTC +
Preference number: 4 (lower is better)
Translates to: GAWIPLLVKASWPSSDKVKVPLA*EPGSLF
Trigger: GAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTT...CACCTTGTCACTGCTGGGCCAAGAAGCCTTCACTAGGAGTGGGATCCAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp CTCCATGAACACCTCCACGCACTCCAGCACGCTCAGCCATGTCAGCAGCTTCTGACTCCCTCAAGTCATTaGTTAGCACGCTCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: LHEHLHALQHAQPCQQLLTPSSH*LARSPP
Trigger: GGGCGGAGAGCGTGCTAACCAATGACTTGAGGGAGT...CAGAAGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGTGGAGGTGTTCATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528674.5
CDS-3UTR CCA 90 bp ACCAGCTCTGACAGCTCGTGCGAATCGGCGAATCGACCTGGACGGGTCTTCTCAATCGGCGAATCGACCTaGACGGGTCTTCTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: TSSDSSCESANRPGRVFSIGEST*TGLLKH
Trigger: GTGCTTGAGAAGACCCGTCCAGGTCGATTCGCCGAT...TGAGAAGACCCGTCCAGGTCGATTCGCCGATTCGCACGAGCTGTCAGAGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS-3UTR TCA 90 bp GCCATGTCAGCAGCTTCTGCTGGGACAGCGACACAGGCAACTTTTTCCGAAGCTCTTCACCCCATCTCTTaGACCGCTTCCCACTCGGGT +
Preference number: 4 (lower is better)
Translates to: AMSAASAGTATQATFSEALHPIS*TASHSG
Trigger: ACCCGAGTGGGAAGCGGTTCAAGAGATGGGGTGAAG...AGCTTCGGAAAAAGTTGCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp TCCTTCCGTAGGATCCCGTCATTGAGCAGCACAAGCAGGTTAGAGGCAGAGTACGCTTCTTCCCAGCTCTaGCAGCTCGTGCGAATCGGC +
Preference number: 4 (lower is better)
Translates to: SFRRIPSLSSTSRLEAEYASSQL*QLVRIG
Trigger: GCCGATTCGCACGAGCTGTCAGAGCTGGGAAGAAGC...GTACTCTGCCTCTAACCTGCTTGTGCTGCTCAATGACGGGATCCTACGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp AGCTCCTTCCGTAGGATCCCGTCATTGAGCAGCACAAGCAGGTTAGAGGCAGAGCATGTCAGCAGCTTCTaGTGGGACAGCGACACAGGC +
Preference number: 4 (lower is better)
Translates to: SSFRRIPSLSSTSRLEAEHVSSF*WDSDTG
Trigger: GCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATG...CTCTGCCTCTAACCTGCTTGTGCTGCTCAATGACGGGATCCTACGGAAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp GAAGTCACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTAGGACTGCTCATGGTTaGCAGGGCTGTGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: EVTAFCGRGAWIPLLVKARTAHG*QGCGHH
Trigger: ATGGTGACCACAGCCCTGGCAACCATGAGCAGTCCT...AGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp CACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTTGAGGACTGCTCATGGTTaGCAGGGCTGTGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: HRFLWERSLDPTPSEGFLRTAHG*QGCGHH
Trigger: ATGGTGACCACAGCCCTGGCAACCATGAGCAGTCCT...CAAGAAGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp AACTTTTTCCGAAGCTCCTTCCGTAGGATCCCGTCATTGAGCAGCACAAGCAGGGCAGCTTCTCCATCCTaGCCTCGGCACCGACAGACC +
Preference number: 4 (lower is better)
Translates to: NFFRSSFRRIPSLSSTSRAASPS*PRHRQT
Trigger: GGTCTGTCGGTGCCGAGGGCAGGATGGAGAAGCTGC...CCTGCTTGTGCTGCTCAATGACGGGATCCTACGGAAGGAGCTTCGGAAAAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp GAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATAGGCAGAGTACACTCTaGTTTTCAAAACCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: EGDDKPAAHFTPHLGSSHRQSTL*FSKPSA
Trigger: TGCACTGGGTTTTGAAAAGCAGAGTGTACTCTGCCT...ATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CCA 90 bp ATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCCTAGTGAAGGCTTCTTaGCCCAGCAGTGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: MQGLKCHLRGSQAHCSPGLVKAS*PSSDKV
Trigger: CACCTTGTCACTGCTGGGCCAAGAAGCCTTCACTAG...GCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp ACCGCTTTCTGTGGGAGAGGAGCCTGGATCCCACTCCTAGTGAAGGCTTCTTGGAAAGTGCCACTTGCGTaGGAGCCAGGCTCACTGTTC +
Preference number: 4 (lower is better)
Translates to: TAFCGRGAWIPLLVKASWKVPLA*EPGSLF
Trigger: GAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTT...CCAAGAAGCCTTCACTAGGAGTGGGATCCAGGCTCCTCTCCCACAGAAAGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR TCA 90 bp GACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACTGGGCAAACACTCTTaGGGTAGTTACAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: DKPAAHFTPHLGSSHLHELGKHS*GSYNLG
Trigger: TCCCAGATTGTAACTACCTCAAGAGTGTTTGCCCAG...TTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp TTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTCACAATCGGCGAATCGACCTaGCAGCAGGTAACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LKCHLRGSQAHCSPGSVTIGEST*QQVTEA
Trigger: GGCTTCAGTTACCTGCTGGCAGGTCGATTCGCCGAT...TGTGACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp AGCTCCTTCCGTAGGATCCCGTCATTGAGCAGCACAAGCAGGTTAGAGGCAGAGGATCAAAGGTCAGGGTaGCACCTGCCAGCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: SSFRRIPSLSSTSRLEAEDQRSG*HLPAGN
Trigger: GTTACCTGCTGGCAGGTGCCACCCTGACCTTTGATC...CTCTGCCTCTAACCTGCTTGTGCTGCTCAATGACGGGATCCTACGGAAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS-3UTR TCA 90 bp CTCCATGAACACCTCCACGCACTCCAGCACGCTCAGCCATGTCAGCAGCTTCTGCTGGGCAAACACTCTTaGGGTAGTTACAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: LHEHLHALQHAQPCQQLLLGKHS*GSYNLG
Trigger: TCCCAGATTGTAACTACCTCAAGAGTGTTTGCCCAG...CAGAAGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGTGGAGGTGTTCATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp CTTGAACCAGAGCAGCAGGAGCATCCGCAGTACAGCCTTGGCCAGCTGGACGAGAGGCAGAGTACACTCTaGTTTTCAAAACCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LEPEQQEHPQYSLGQLDERQSTL*FSKPSA
Trigger: TGCACTGGGTTTTGAAAAGCAGAGTGTACTCTGCCT...CTCGTCCAGCTGGCCAAGGCTGTACTGCGGATGCTCCTGCTGCTCTGGTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528674.5
CDS-3UTR CCA 90 bp GGGAGAAAAGCCTTTTACTCTCAACCGAGGATGCAGGGCTTAAAGTGCCACTTGACAGCCTTGGCCAGCTaGACGAGGGCGATGACAAGC +
Preference number: 4 (lower is better)
Translates to: GRKAFYSQPRMQGLKCHLTALAS*TRAMTS
Trigger: GCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGCTGT...CAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGAGTAAAAGGCTTTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR GCA 90 bp CCCGTCATTGAGCAGCACAAGCAGGTTAGAGGCAGAGTACACTCTGCTTTTCAACATGTCAGCAGCTTCTaGTGGGACAGCGACACAGGC +
Preference number: 4 (lower is better)
Translates to: PVIEQHKQVRGRVHSAFQHVSSF*WDSDTG
Trigger: GCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATG...TTGAAAAGCAGAGTGTACTCTGCCTCTAACCTGCTTGTGCTGCTCAATGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CCA 90 bp GGGAGAAAAGCCTTTTACTCTCAACCGAGGATGCAGGGCTTAAAGTGCCACTTGAGTCACCGCTTTCTGTaGGAGAGGAGCCTGGATCCC +
Preference number: 4 (lower is better)
Translates to: GRKAFYSQPRMQGLKCHLSHRFL*ERSLDP
Trigger: GGGATCCAGGCTCCTCTCCCACAGAAAGCGGTGACT...CAAGTGGCACTTTAAGCCCTGCATCCTCGGTTGAGAGTAAAAGGCTTTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CCA 90 bp CCCGTCATTGAGCAGCACAAGCAGGTTAGAGGCAGAGTACACTCTGCTTTTCAACTTAGGCCCGCCTCTTaGTTGCTTAACTTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: PVIEQHKQVRGRVHSAFQLRPAS*LLNFRG
Trigger: CCCGCGGAAGTTAAGCAACCAAGAGGCGGGCCTAAG...TTGAAAAGCAGAGTGTACTCTGCCTCTAACCTGCTTGTGCTGCTCAATGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp GGGACAGCGACACAGGCAACTTTTTCCGAAGCTCCTTCCGTAGGATCCCGTCATTTCTGGGACCATCAGTaGCTGTTCTCTAACCTCACT +
Preference number: 4 (lower is better)
Translates to: GTATQATFSEAPSVGSRHFWDHQ*LFSNLT
Trigger: AGTGAGGTTAGAGAACAGTCACTGATGGTCCCAGAA...ATGACGGGATCCTACGGAAGGAGCTTCGGAAAAAGTTGCCTGTGTCGCTGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR TCA 90 bp AGCCATGTCAGCAGCTTCTGCTGGGACAGCGACACAGGCAACTTTTTCCGAAGCATTCTTTCAGGACTGTaGCAGCAGTCACTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SHVSSFCWDSDTGNFFRSILSGL*QQSLGK
Trigger: TTTGCCCAGTGACTGCTGTCACAGTCCTGAAAGAAT...GCTTCGGAAAAAGTTGCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR GCA 90 bp TTGAGCAGCACAAGCAGGTTAGAGGCAGAGTACACTCTGCTTTTCAAAACCCAGAGCTCTGACAGCTCGTaGGAATCGGCGAATCGACTC +
Preference number: 4 (lower is better)
Translates to: LSSTSRLEAEYTLLFKTQSSDSS*ESANRL
Trigger: GAGTCGATTCGCCGATTCGCACGAGCTGTCAGAGCT...CTGGGTTTTGAAAAGCAGAGTGTACTCTGCCTCTAACCTGCTTGTGCTGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528674.5
CDS-3UTR CCA 90 bp TCCTTCCGTAGGATCCCGTCATTGAGCAGCACAAGCAGGTTAGAGGCAGAGTACGAGGTAGTTACAATCTaGGAATCCTGGAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: SFRRIPSLSSTSRLEAEYEVVTI*ESWNLG
Trigger: TCCCAGATTCCAGGATTCCCAGATTGTAACTACCTC...GTACTCTGCCTCTAACCTGCTTGTGCTGCTCAATGACGGGATCCTACGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CCA 90 bp AACTTTTTCCGAAGCTCCTTCCGTAGGATCCCGTCATTGAGCAGCACAAGCAGGGAGGTAGTTACAATCTaGGAATCCTGGAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: NFFRSSFRRIPSLSSTSREVVTI*ESWNLG
Trigger: TCCCAGATTCCAGGATTCCCAGATTGTAACTACCTC...CCTGCTTGTGCTGCTCAATGACGGGATCCTACGGAAGGAGCTTCGGAAAAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CCA 90 bp TTTCAGGACTGTGACAGCAGTCACTGGGCAAACACTCTTGAGGTAGTTACAATCTGTGACAGCAGTCACTaGGCAAACACTCTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: FQDCDSSHWANTLEVVTICDSSH*ANTLEV
Trigger: TACCTCAAGAGTGTTTGCCCAGTGACTGCTGTCACA...GATTGTAACTACCTCAAGAGTGTTTGCCCAGTGACTGCTGTCACAGTCCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529030.1
CDS CCA 90 bp CAAGGGTGTCCTGGGAGGAACGCTGGTGGCGACCAGGGCTGTGTGTaGGGCCTGGCCGGTAGGCACGGAGAGGCCGCACGCTGGGACGTT +
Preference number: 5 (lower is better)
Translates to: QGCPGRNAGGDQGCV*GLAGRHGEAARWDV
Trigger: AACGTCCCAGCGTGCGGCCTCTCCGTGCCTACCGGCCAGGCCCCACACACAGCCCTGGTCGCCACCAGCGTTCCTCCCAGGACACCCTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241041.7
CDS CCA 90 bp AGCGGTCATAGAAAGGAGAGCGCAGCAGGTAGTAGAGCAGCAGGATaGTCCGGCGCCGCAGCTCCCGCCGCTCCCTCCGGGTCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: SGHRKESAAGSRAAG*SGAAAPAAPSGSGP
Trigger: AGGGCCTGACCCGGAGGGAGCGGCGGGAGCTGCGGCGCCGGACCATCCTGCTGCTCTACTACCTGCTGCGCTCTCCTTTCTATGACCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000532681.5
CDS CCA 90 bp GAGGCCGCACGCTGGGACGTTGTGACCAGGCCAACGCCAGGGACGTaGTCGGCCAGCAACTGGAGCAGGAAGAGGATCCTGGCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: EAARWDVVTRPTPGT*SASNWSRKRILASE
Trigger: CTCCGAGGCCAGGATCCTCTTCCTGCTCCAGTTGCTGGCCGACCACGTCCCTGGCGTTGGCCTGGTCACAACGTCCCAGCGTGCGGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241041.7
CDS-3UTR CAA 90 bp GGCCTGGCCGGTAGGCACGGAGAGGCCGCACGCTGGGACGCTGCCGGAGTCAGTACTTCACCCCACACCTaGGCAGCTCCCATCTCCATG +
Preference number: 5 (lower is better)
Translates to: GLAGRHGEAARWDAAGVSTSPHT*AAPISM
Trigger: CATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGT...ACTGACTCCGGCAGCGTCCCAGCGTGCGGCCTCTCCGTGCCTACCGGCCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378750.10
CDS GCA 90 bp CTGCCCTCGGCACCGACAGACCCACAGAAGGACCGTACGACAGGCTaGGGCGCCCTGCTTCCTGCGCCCTCCTTCCTGCTTCCGGTCTTA +
Preference number: 5 (lower is better)
Translates to: LPSAPTDPQKDRTTG*GALLPAPSFLLPVL
Trigger: TAAGACCGGAAGCAGGAAGGAGGGCGCAGGAAGCAGGGCGCCGCAGCCTGTCGTACGGTCCTTCTGTGGGTCTGTCGGTGCCGAGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525192.5
ENST00000528674.5
ENST00000529030.1
CDS CCA 90 bp CCCAAAGGGCTCGCGCCTGCATTCCCACATACGCGAAGAAAGCCCTaGCCCGGGCTTCTCTCGGCTCGGTGGCCCTTGGGCGGGAGTATC +
Preference number: 5 (lower is better)
Translates to: PKGLAPAFPHTRRKP*PGLLSARWPLGGSI
Trigger: GATACTCCCGCCCAAGGGCCACCGAGCCGAGAGAAGCCCGGGCCAGGGCTTTCTTCGCGTATGTGGGAATGCAGGCGCGAGCCCTTTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS GCA 90 bp CGAATCGGCGAATCGACCTGCCAGCAGGTAACTGAAGCCCCGCACTaGTGTCTCCAGCTGGGCCGTGGCGGCCGGGTGACGAGTCACGTA +
Preference number: 5 (lower is better)
Translates to: RIGESTCQQVTEAPH*CLQLGRGGRVTSHV
Trigger: TACGTGACTCGTCACCCGGCCGCCACGGCCCAGCTGGAGACAGCAGTGCGGGGCTTCAGTTACCTGCTGGCAGGTCGATTCGCCGATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000529030.1
ENST00000533151.5
CDS GCA 90 bp CGTACTCCTGGTAGCGGAGGCCCAGGAGCCGCAGCTTCTCCATCCTaGCCTCGGCACCGACAGACCCACAGAAGGACCGTACGACAGGCT +
Preference number: 5 (lower is better)
Translates to: RTPGSGGPGAAASPS*PRHRQTHRRTVRQA
Trigger: AGCCTGTCGTACGGTCCTTCTGTGGGTCTGTCGGTGCCGAGGGCAGGATGGAGAAGCTGCGGCTCCTGGGCCTCCGCTACCAGGAGTACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378750.10
ENST00000529030.1
CDS GCA 90 bp TCGACTCCTGGTAGCGGAGGCCCAGGAGCCGCAGCTTCTCCATCCTaGCCTCGGCACCGACAGACCCACAGAAGGACCGTACGACAGGCT +
Preference number: 5 (lower is better)
Translates to: STPGSGGPGAAASPS*PRHRQTHRRTVRQA
Trigger: AGCCTGTCGTACGGTCCTTCTGTGGGTCTGTCGGTGCCGAGGGCAGGATGGAGAAGCTGCGGCTCCTGGGCCTCCGCTACCAGGAGTCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525192.5
ENST00000528674.5
ENST00000532554.5
CDS GCA 90 bp AAAGGTCAGGGTGGCACCTGCCAGCAGGTAACTGAAGCCCCGCACTaGTGTCTCCAGCTGGGCCGTGGCGGCCGGGTGACGAGTCACGTA +
Preference number: 5 (lower is better)
Translates to: KGQGGTCQQVTEAPH*CLQLGRGGRVTSHV
Trigger: TACGTGACTCGTCACCCGGCCGCCACGGCCCAGCTGGAGACAGCAGTGCGGGGCTTCAGTTACCTGCTGGCAGGTGCCACCCTGACCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS-3UTR CAA 90 bp AGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCTCACCAGGGGCCAGCGAATCCGCAGTACAGCCTaGGCCAGCTGGACGAGGGCG +
Preference number: 5 (lower is better)
Translates to: SVQPSPGFRLPVLTRGQRIRSTA*ASWTRA
Trigger: CGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGAT...TCGCTGGCCCCTGGTGAGGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CAA 90 bp AGCATCCGCAGTACAGCCTTGGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGATCCGCAGTACAGCCTaGGCCAGCTGGACGAGGGCG +
Preference number: 5 (lower is better)
Translates to: SIRSTALASWTRAMTSQRIRSTA*ASWTRA
Trigger: CGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGAT...CCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGATGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS TCA 90 bp GGAGTGCAGGGACGGCGTGTTCTGGAGGGTTCGCACCACCCGGTTTaGCCGCTTCCCCACGTAGGACTGCTCATGGTTGCCAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GVQGRRVLEGSHHPV*PLPHVGLLMVARAV
Trigger: CACAGCCCTGGCAACCATGAGCAGTCCTACGTGGGGAAGCGGTCAAACCGGGTGGTGCGAACCCTCCAGAACACGCCGTCCCTGCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000525192.5
ENST00000527371.1
ENST00000532554.5
ENST00000532681.5
ENST00000533151.5
CDS TCA 90 bp GAAGGAACTGATCAAAGGTCAGGGTGGCACCTGCCAGCAGGTAACTaGAGCCCCGCACTGCTGTCTCCAGCTGGGCCGTGGCGGCCGGGT +
Preference number: 5 (lower is better)
Translates to: EGTDQRSGWHLPAGN*SPALLSPAGPWRPG
Trigger: ACCCGGCCGCCACGGCCCAGCTGGAGACAGCAGTGCGGGGCTTCAGTTACCTGCTGGCAGGTGCCACCCTGACCTTTGATCAGTTCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS CCA 90 bp CCACATACGCGAAGAAAGCCCTGGCCCGGGCTTCTCTCGGCTCGGTaGCCCTTGGGCGGGAGTATCCCTTCTCTGGGTCTCGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: PHTRRKPWPGLLSAR*PLGGSIPSLGLGFP
Trigger: GGGAAATCCGAGACCCAGAGAAGGGATACTCCCGCCCAAGGGCCACCGAGCCGAGAGAAGCCCGGGCCAGGGCTTTCTTCGCGTATGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS-3UTR CAA 90 bp TGGCCCAGCAGTGACAAGGTGCGGGCTGCAGTGGCATCGTCACAGGAGAGCGCATTCGCACCACCCGGTTaGACCGCTTCCCCACGTAGG +
Preference number: 5 (lower is better)
Translates to: WPSSDKVRAAVASSQESAFAPPG*TASPRR
Trigger: CCTACGTGGGGAAGCGGTCAAACCGGGTGGTGCGAA...TGCGCTCTCCTGTGACGATGCCACTGCAGCCCGCACCTTGTCACTGCTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CAA 90 bp GGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTCCTTCACCCCATCTCTaGAACCGCTTCCCACTCGGG +
Preference number: 5 (lower is better)
Translates to: GQLDEGDDKPAAHFTPHLPSPHL*NRFPLG
Trigger: CCCGAGTGGGAAGCGGTTCAAGAGATGGGGTGAAGG...AAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS TCA 90 bp CGAATCGACCTGGACGGGTCTTCTCAAGCACAGCGATCACTACCCTaGCTCCGCAGGGAAGGGGGCCACTGGGGTCATAGGTCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: RIDLDGSSQAQRSLP*LRREGGHWGHRSGP
Trigger: GGGCCCTGACCTATGACCCCAGTGGCCCCCTTCCCTGCGGAGTCAGGGTAGTGATCGCTGTGCTTGAGAAGACCCGTCCAGGTCGATTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS GCA 90 bp CCTGCGCCCTCCTTCCTGCTTCCGGTCTTAGGCCCGCCTCTTGGTTaGTTAACTTCCGCGGGCCAGAAGGCTGAGGACTTGAAGAACCGG +
Preference number: 5 (lower is better)
Translates to: PAPSFLLPVLGPPLG*LTSAGQKAEDLKNR
Trigger: CCGGTTCTTCAAGTCCTCAGCCTTCTGGCCCGCGGAAGTTAAGCAACCAAGAGGCGGGCCTAAGACCGGAAGCAGGAAGGAGGGCGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525192.5
ENST00000528674.5
ENST00000529030.1
CDS GCA 90 bp GCACAGTTAGTGCTCCGGCTTCGGCCTCAGCTCCCGTATGGACTGTaGCCCCCAAAGGGCTCGCGCCTGCATTCCCACATACGCGAAGAA +
Preference number: 5 (lower is better)
Translates to: AQLVLRLRPQLPYGL*PPKGSRLHSHIREE
Trigger: TTCTTCGCGTATGTGGGAATGCAGGCGCGAGCCCTTTGGGGGGCACAGTCCATACGGGAGCTGAGGCCGAAGCCGGAGCACTAACTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS-3UTR CAA 90 bp GGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTATCCGCAGTACAGCCTaGGCCAGCTGGACGAGGGCG +
Preference number: 5 (lower is better)
Translates to: GLKVPLAWEPGSLFTRLCIRSTA*ASWTRA
Trigger: CGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGAT...ACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CAA 90 bp GGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCACCCCACACCTTTACTCCCTCAAGTCATaGGTTAGCACGCTCTCCGCC +
Preference number: 5 (lower is better)
Translates to: GQLDEGDDKPAAHFTPHLYSLKS*VSTLSA
Trigger: GGCGGAGAGCGTGCTAACCAATGACTTGAGGGAGTA...AAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CAA 90 bp AGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACCCCTTCACCCCATCTCTaGAACCGCTTCCCACTCGGG +
Preference number: 5 (lower is better)
Translates to: SQRPTSPHTLAAPISMNTPSPHL*NRFPLG
Trigger: CCCGAGTGGGAAGCGGTTCAAGAGATGGGGTGAAGG...GGTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CAA 90 bp GACAAGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAAAGGCCCGCCTCTTGGTaGCTTAACTTCCGCGGGCCA +
Preference number: 5 (lower is better)
Translates to: DKPAAHFTPHLGSSHLHERPASW*LNFRGP
Trigger: TGGCCCGCGGAAGTTAAGCAACCAAGAGGCGGGCCT...TTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS GCA 90 bp CAGCCCACAGTGCCAGCCCTATCCTGCCCCGCGCTAAGGATACAGTaGAGCAGCGGCCGGGCAATGTACAAAAACTCTGCGATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: QPTVPALSCPALRIQ*SSGRAMYKNSAMVS
Trigger: GGAGACCATCGCAGAGTTTTTGTACATTGCCCGGCCGCTGCTGCACTGTATCCTTAGCGCGGGGCAGGATAGGGCTGGCACTGTGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527371.1
CDS-3UTR CAA 90 bp GGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTTTCGCACCACCCGGTTaGACCGCTTCCCCACGTAGG +
Preference number: 5 (lower is better)
Translates to: GLKVPLAWEPGSLFTRLCFAPPG*TASPRR
Trigger: CCTACGTGGGGAAGCGGTCAAACCGGGTGGTGCGAA...ACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CAA 90 bp AGGCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATGGCTTAAAGTGCCACTaGCGTGGGAGCCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: RLPVLTRGQRESSSVRSYGLKCH*RGSQAH
Trigger: GTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCC...ATAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CAA 90 bp CAGTACAGCCTTGGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCCCACTTCCGTAGGATCCCGTCATaGAGCAGCACAAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: QYSLGQLDEGDDKPAAHFRRIPS*SSTSRL
Trigger: TAACCTGCTTGTGCTGCTCAATGACGGGATCCTACG...GAAGTGGGCCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGCTGTACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS-3UTR CAA 90 bp GCCATGTCAGCAGCTTCTGCTGGGACAGCGACACAGGCAACTTTTTCCGAAGCTATCCGCAGTACAGCCTaGGCCAGCTGGACGAGGGCG +
Preference number: 5 (lower is better)
Translates to: AMSAASAGTATQATFSEAIRSTA*ASWTRA
Trigger: CGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGAT...AGCTTCGGAAAAAGTTGCCTGTGTCGCTGTCCCAGCAGAAGCTGCTGACATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525229.5
ENST00000528674.5
CDS-3UTR CAA 90 bp GGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCTCTGTGGCTTAAAGTGCCACTaGCGTGGGAGCCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: GLKVPLAWEPGSLFTRLCGLKCH*RGSQAH
Trigger: GTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCC...ACAGAGCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CAA 90 bp AGCCAGCGGCCCACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACCTACTCCCTCAAGTCATaGGTTAGCACGCTCTCCGCC +
Preference number: 5 (lower is better)
Translates to: SQRPTSPHTLAAPISMNTYSLKS*VSTLSA
Trigger: GGCGGAGAGCGTGCTAACCAATGACTTGAGGGAGTA...GGTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGTGGGCCGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CAA 90 bp CAGAAGACACGCTGGGCAGCGTTCAGCCATCACCCGGGTTCAGGCTTCCTGTCCCGTAGGATCCCGTCATaGAGCAGCACAAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: QKTRWAAFSHHPGSGFLSRRIPS*SSTSRL
Trigger: TAACCTGCTTGTGCTGCTCAATGACGGGATCCTACG...GGACAGGAAGCCTGAACCCGGGTGATGGCTGAACGCTGCCCAGCGTGTCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CAA 90 bp GCTTCCTGTCCTCACCAGGGGCCAGCGAGAGAGCAGCAGTGTTCGCTCCTATGGCGTAGGATCCCGTCATaGAGCAGCACAAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: ASCPHQGPAREQQCSLLWRRIPS*SSTSRL
Trigger: TAACCTGCTTGTGCTGCTCAATGACGGGATCCTACG...CCATAGGAGCGAACACTGCTGCTCTCTCGCTGGCCCCTGGTGAGGACAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CAA 90 bp ATGCAGGGCTTAAAGTGCCACTTGCGTGGGAGCCAGGCTCACTGTTCACCAGGCACTTCACCCCACACCTaGGCAGCTCCCATCTCCATG +
Preference number: 5 (lower is better)
Translates to: MQGLKCHLRGSQAHCSPGTSPHT*AAPISM
Trigger: CATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGT...GCCTGGTGAACAGTGAGCCTGGCTCCCACGCAAGTGGCACTTTAAGCCCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241041.7
ENST00000378750.10
CDS-3UTR CAA 90 bp AGCATCCGCAGTACAGCCTTGGCCAGCTGGACGAGGGCGATGACAAGCCAGCGGCTGGGAGATCTAGACTaGAATCTTGGTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: SIRSTALASWTRAMTSQRLGDLD*NLGSGT
Trigger: GGTCCCAGAACCAAGATTCAAGTCTAGATCTCCCAG...CCGCTGGCTTGTCATCGCCCTCGTCCAGCTGGCCAAGGCTGTACTGCGGATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528674.5
CDS TCA 90 bp CTTAGGCCCGCCTCTTGGTTGCTTAACTTCCGCGGGCCAGAAGGCTaGGGACTTGAAGAACCGGTGAACCACCCTTCACCCCATCTCTTG +
Preference number: 5 (lower is better)
Translates to: LRPASWLLNFRGPEG*GLEEPVNHPSPHLL
Trigger: CAAGAGATGGGGTGAAGGGTGGTTCACCGGTTCTTCAAGTCCTCAGCCTTCTGGCCCGCGGAAGTTAAGCAACCAAGAGGCGGGCCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525192.5
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CAA 90 bp ATCTCCATGAACACCTCCACGCACTCCAGCACGCTCAGCCATGTCAGCAGCTTCACTTCACCCCACACCTaGGCAGCTCCCATCTCCATG +
Preference number: 5 (lower is better)
Translates to: ISMNTSTHSSTLSHVSSFTSPHT*AAPISM
Trigger: CATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGT...GAAGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGTGGAGGTGTTCATGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
CDS CCA 90 bp GCAGTTCATTCTAGAGAAGGGAGCTGGAGCCCCGAGTCTTTCCAATaGAACGCCGAGAGACTCGAACGGCAGGGCCGGATTTTAAAGGGC +
Preference number: 5 (lower is better)
Translates to: AVHSREGSWSPESFQ*NAERLERQGRILKG
Trigger: GCCCTTTAAAATCCGGCCCTGCCGTTCGAGTCTCTCGGCGTTCCATTGGAAAGACTCGGGGCTCCAGCTCCCTTCTCTAGAATGAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS-3UTR CAA 90 bp ACTTCACCCCACACCTTGGCAGCTCCCATCTCCATGAACACCTCCACGCACTCCCGTAGGATCCCGTCATaGAGCAGCACAAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: TSPHTLAAPISMNTSTHSRRIPS*SSTSRL
Trigger: TAACCTGCTTGTGCTGCTCAATGACGGGATCCTACG...GGAGTGCGTGGAGGTGTTCATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CAA 90 bp CATGAACACCTCCACGCACTCCAGCACGCTCAGCCATGTCAGCAGCTTCTGCTGCGTAGGATCCCGTCATaGAGCAGCACAAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: HEHLHALQHAQPCQQLLLRRIPS*SSTSRL
Trigger: TAACCTGCTTGTGCTGCTCAATGACGGGATCCTACG...CAGCAGAAGCTGCTGACATGGCTGAGCGTGCTGGAGTGCGTGGAGGTGTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525229.5
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CAA 90 bp GACAGCAGTCACTGGGCAAACACTCTTGAGGTAGTTACAATCTGGGAATCCTGGAGGCCCGCCTCTTGGTaGCTTAACTTCCGCGGGCCA +
Preference number: 5 (lower is better)
Translates to: DSSHWANTLEVVTIWESWRPASW*LNFRGP
Trigger: TGGCCCGCGGAAGTTAAGCAACCAAGAGGCGGGCCT...CCAGGATTCCCAGATTGTAACTACCTCAAGAGTGTTTGCCCAGTGACTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529030.1
CDS-3UTR CAA 90 bp TTGAGCAGCACAAGCAGGTTAGAGGCAGAGTACACTCTGCTTTTCAAAACCCAGACTTCACCCCACACCTaGGCAGCTCCCATCTCCATG +
Preference number: 5 (lower is better)
Translates to: LSSTSRLEAEYTLLFKTQTSPHT*AAPISM
Trigger: CATGGAGATGGGAGCTGCCAAGGTGTGGGGTGAAGT...CTGGGTTTTGAAAAGCAGAGTGTACTCTGCCTCTAACCTGCTTGTGCTGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS-3UTR CAA 90 bp TTTCAGGACTGTGACAGCAGTCACTGGGCAAACACTCTTGAGGTAGTTACAATCCTGGGAGATCTAGACTaGAATCTTGGTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: FQDCDSSHWANTLEVVTILGDLD*NLGSGT
Trigger: GGTCCCAGAACCAAGATTCAAGTCTAGATCTCCCAG...GATTGTAACTACCTCAAGAGTGTTTGCCCAGTGACTGCTGTCACAGTCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529030.1
CDS CCA 90 bp AGTCACTGGGCAAACACTCTTGAGGTAGTTACAATCTGGGAATCCTaGAATCTGGGAGATCTAGACTTGAATCTTGGTTCTGGGACCATC +
Preference number: 5 (lower is better)
Translates to: SHWANTLEVVTIWES*NLGDLDLNLGSGTI
Trigger: GATGGTCCCAGAACCAAGATTCAAGTCTAGATCTCCCAGATTCCAGGATTCCCAGATTGTAACTACCTCAAGAGTGTTTGCCCAGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS GCA 72 bp GGTGGCACCTGCCAGCAGGTAACTGAAGCCCCGCACTaGTGTCTCCAGCTGGGCCGTGGCGGCCGGGTGACG +
Preference number: 6 (lower is better)
Translates to: GGTCQQVTEAPH*CLQLGRGGRVT
Trigger: CGTCACCCGGCCGCCACGGCCCAGCTGGAGACAGCAGTGCGGGGCTTCAGTTACCTGCTGGCAGGTGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS GCA 72 bp TGCTGCCGTCCCTCCCGCTGCTGGGGAGCTCCCCAGTaGCTGGAGTGCAGGGACGGCGTGTTCTGGAGGGTT +
Preference number: 6 (lower is better)
Translates to: CCRPSRCWGAPQ*LECRDGVFWRV
Trigger: AACCCTCCAGAACACGCCGTCCCTGCACTCCAGGCACTGGGGAGCTCCCCAGCAGCGGGAGGGACGGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000525192.5
ENST00000527371.1
ENST00000532554.5
ENST00000532681.5
ENST00000533151.5
CDS GCA 72 bp GAAGGACCGTACGACAGGCTGCGGCGCCCTGCTTCCTaGGCCCTCCTTCCTGCTTCCGGTCTTAGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: EGPYDRLRRPAS*ALLPASGLRPA
Trigger: GGCGGGCCTAAGACCGGAAGCAGGAAGGAGGGCGCAGGAAGCAGGGCGCCGCAGCCTGTCGTACGGTCCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525192.5
ENST00000528674.5
ENST00000529030.1
CDS GCA 72 bp GAATCGACCTGCCAGCAGGTAACTGAAGCCCCGCACTaGTGTCTCCAGCTGGGCCGTGGCGGCCGGGTGACG +
Preference number: 6 (lower is better)
Translates to: ESTCQQVTEAPH*CLQLGRGGRVT
Trigger: CGTCACCCGGCCGCCACGGCCCAGCTGGAGACAGCAGTGCGGGGCTTCAGTTACCTGCTGGCAGGTCGATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000529030.1
ENST00000533151.5
CDS CCA 72 bp CTCGCGCCTGCATTCCCACATACGCGAAGAAAGCCCTaGCCCGGGCTTCTCTCGGCTCGGTGGCCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: LAPAFPHTRRKP*PGLLSARWPLG
Trigger: GCCCAAGGGCCACCGAGCCGAGAGAAGCCCGGGCCAGGGCTTTCTTCGCGTATGTGGGAATGCAGGCGCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS CCA 72 bp ACCAGGCCAACGCCAGGGACGTGGTCGGCCAGCAACTaGAGCAGGAAGAGGATCCTGGCCTCGGAGAAGCGG +
Preference number: 6 (lower is better)
Translates to: TRPTPGTWSASN*SRKRILASEKR
Trigger: CCGCTTCTCCGAGGCCAGGATCCTCTTCCTGCTCCAGTTGCTGGCCGACCACGTCCCTGGCGTTGGCCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000532681.5
CDS CCA 72 bp AGCCCTGGCCCGGGCTTCTCTCGGCTCGGTGGCCCTTaGGCGGGAGTATCCCTTCTCTGGGTCTCGGATTTC +
Preference number: 6 (lower is better)
Translates to: SPGPGFSRLGGP*AGVSLLWVSDF
Trigger: GAAATCCGAGACCCAGAGAAGGGATACTCCCGCCCAAGGGCCACCGAGCCGAGAGAAGCCCGGGCCAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS CCA 72 bp CGAAGAAAGCCCTGGCCCGGGCTTCTCTCGGCTCGGTaGCCCTTGGGCGGGAGTATCCCTTCTCTGGGTCTC +
Preference number: 6 (lower is better)
Translates to: RRKPWPGLLSAR*PLGGSIPSLGL
Trigger: GAGACCCAGAGAAGGGATACTCCCGCCCAAGGGCCACCGAGCCGAGAGAAGCCCGGGCCAGGGCTTTCTTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS TCA 72 bp CGTGCGAATCGGCGAATCGACCTGCCAGCAGGTAACTaGAGCCCCGCACTGCTGTCTCCAGCTGGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: RANRRIDLPAGN*SPALLSPAGPW
Trigger: CCACGGCCCAGCTGGAGACAGCAGTGCGGGGCTTCAGTTACCTGCTGGCAGGTCGATTCGCCGATTCGCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000529030.1
ENST00000533151.5
CDS GCA 72 bp GTGCTCCGGCTTCGGCCTCAGCTCCCGTATGGACTGTaGCCCCCAAAGGGCTCGCGCCTGCATTCCCACATA +
Preference number: 6 (lower is better)
Translates to: VLRLRPQLPYGL*PPKGSRLHSHI
Trigger: TATGTGGGAATGCAGGCGCGAGCCCTTTGGGGGGCACAGTCCATACGGGAGCTGAGGCCGAAGCCGGAGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS GCA 72 bp CGTGCGAATCGGCGAATCGACCGGGTTGGCTGCCCTTaGGCCTGCGCAGTTAAAGCTCCGGTAAAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: RANRRIDRVGCP*ACAVKAPVKPG
Trigger: GCCCGGCTTTACCGGAGCTTTAACTGCGCAGGCGCAAGGGCAGCCAACCCGGTCGATTCGCCGATTCGCACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS CCA 72 bp CGCTGGGACGTTGTGACCAGGCCAACGCCAGGGACGTaGTCGGCCAGCAACTGGAGCAGGAAGAGGATCCTG +
Preference number: 6 (lower is better)
Translates to: RWDVVTRPTPGT*SASNWSRKRIL
Trigger: CAGGATCCTCTTCCTGCTCCAGTTGCTGGCCGACCACGTCCCTGGCGTTGGCCTGGTCACAACGTCCCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241041.7
CDS CAA 72 bp AAGCCCTGGCCCGGGCTTCTCTCGGCTCGGTGGCCCTaGGGCGGGAGTATCCCTTCTCTGGGTCTCGGATTT +
Preference number: 6 (lower is better)
Translates to: KPWPGLLSARWP*GGSIPSLGLGF
Trigger: AAATCCGAGACCCAGAGAAGGGATACTCCCGCCCAAGGGCCACCGAGCCGAGAGAAGCCCGGGCCAGGGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS TCA 72 bp GGACGGCGTGTTCTGGAGGGTTCGCACCACCCGGTTTaGCCGCTTCCCCACGTAGGACTGCTCATGGTTGCC +
Preference number: 6 (lower is better)
Translates to: GRRVLEGSHHPV*PLPHVGLLMVA
Trigger: GGCAACCATGAGCAGTCCTACGTGGGGAAGCGGTCAAACCGGGTGGTGCGAACCCTCCAGAACACGCCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000525192.5
ENST00000527371.1
ENST00000532554.5
ENST00000532681.5
ENST00000533151.5
CDS TCA 72 bp GATCAAAGGTCAGGGTGGCACCTGCCAGCAGGTAACTaGAGCCCCGCACTGCTGTCTCCAGCTGGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: DQRSGWHLPAGN*SPALLSPAGPW
Trigger: CCACGGCCCAGCTGGAGACAGCAGTGCGGGGCTTCAGTTACCTGCTGGCAGGTGCCACCCTGACCTTTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS GCA 72 bp GGTTTGACCGCTTCCCCACGTAGGACTGCTCATGGTTaGCAGGGCTGTGGTCACCATCCGGGGGCTGTGCCT +
Preference number: 6 (lower is better)
Translates to: GLTASPRRTAHG*QGCGHHPGAVP
Trigger: AGGCACAGCCCCCGGATGGTGACCACAGCCCTGGCAACCATGAGCAGTCCTACGTGGGGAAGCGGTCAAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000525192.5
ENST00000527371.1
ENST00000532554.5
ENST00000532681.5
CDS GCA 72 bp GAGCATCCGCAGTACAGCCCCAGCTCTGACAGCTCGTaGGAATCGGCGAATCGACTCCTGGTAGCGGAGGCC +
Preference number: 6 (lower is better)
Translates to: EHPQYSPSSDSS*ESANRLLVAEA
Trigger: GGCCTCCGCTACCAGGAGTCGATTCGCCGATTCGCACGAGCTGTCAGAGCTGGGGCTGTACTGCGGATGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532554.5
CDS GCA 72 bp AATCGGCGAATCGACCGGGTTGGCTGCCCTTGCGCCTaGGCAGTTAAAGCTCCGGTAAAGCCGGGCGGCAGT +
Preference number: 6 (lower is better)
Translates to: NRRIDRVGCPCA*AVKAPVKPGGS
Trigger: ACTGCCGCCCGGCTTTACCGGAGCTTTAACTGCGCAGGCGCAAGGGCAGCCAACCCGGTCGATTCGCCGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS CCA 72 bp ATGAGCGGCCTTGTGACCAGGCCAACGCCAGGGACGTaGTCGGCCAGCAACTGGAGCAGGAAGAGGATCCTG +
Preference number: 6 (lower is better)
Translates to: MSGLVTRPTPGT*SASNWSRKRIL
Trigger: CAGGATCCTCTTCCTGCTCCAGTTGCTGGCCGACCACGTCCCTGGCGTTGGCCTGGTCACAAGGCCGCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378750.10
ENST00000523721.2
ENST00000532681.5
CDS CAA 72 bp GGGACGGCGTGTTCTGGAGGGTTCGCACCACCCGGTTaGACCGCTTCCCCACGTAGGACTGCTCATGGTTGC +
Preference number: 6 (lower is better)
Translates to: GTACSGGFAPPG*TASPRRTAHGC
Trigger: GCAACCATGAGCAGTCCTACGTGGGGAAGCGGTCAAACCGGGTGGTGCGAACCCTCCAGAACACGCCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000525192.5
ENST00000527371.1
ENST00000532554.5
ENST00000532681.5
ENST00000533151.5
CDS CAA 90 bp TGGAGTGCAGGGACGGCGTGTTCTGGAGGGTTCGCACCACCCGGTTaGACCGCTTCCCCACGTAGGACTGCTCATGGTTGCCAGGGCTGT +
Preference number: 6 (lower is better)
Translates to: WSAGTACSGGFAPPG*TASPRRTAHGCQGC
Trigger: ACAGCCCTGGCAACCATGAGCAGTCCTACGTGGGGAAGCGGTCAAACCGGGTGGTGCGAACCCTCCAGAACACGCCGTCCCTGCACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000525192.5
ENST00000527371.1
ENST00000532554.5
ENST00000532681.5
ENST00000533151.5
CDS TCA 72 bp CTTGAACCGCTTCCCACTCGGGTAGCCCTTAGCAACTaGGGGCCCAAACCCGGCCCCCTACTCCCTCAAGTC +
Preference number: 6 (lower is better)
Translates to: LEPLPTRVALSN*GPKPGPLLPQV
Trigger: GACTTGAGGGAGTAGGGGGCCGGGTTTGGGCCCTCAGTTGCTAAGGGCTACCCGAGTGGGAAGCGGTTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS TCA 72 bp CTGGACGGGTCTTCTCAAGCACAGCGATCACTACCCTaGCTCCGCAGGGAAGGGGGCCACTGGGGTCATAGG +
Preference number: 6 (lower is better)
Translates to: LDGSSQAQRSLP*LRREGGHWGHR
Trigger: CCTATGACCCCAGTGGCCCCCTTCCCTGCGGAGTCAGGGTAGTGATCGCTGTGCTTGAGAAGACCCGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS CCA 72 bp TTGCCAGGGCTGTGGTCACCATCCGGGGGCTGTGCCTaGGTCTCTCTGTCCAGTGGAACGATAGGGGGTGAA +
Preference number: 6 (lower is better)
Translates to: LPGLWSPSGGCA*VSLSSGTIGGE
Trigger: TTCACCCCCTATCGTTCCACTGGACAGAGAGACCCAGGCACAGCCCCCGGATGGTGACCACAGCCCTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241041.7
ENST00000378750.10
ENST00000525192.5
ENST00000527371.1
ENST00000532554.5
ENST00000532681.5
CDS GCA 72 bp GTGCCAGCCCTATCCTGCCCCGCGCTAAGGATACAGTaGAGCAGCGGCCGGGCAATGTACAAAAACTCTGCG +
Preference number: 6 (lower is better)
Translates to: VPALSCPALRIQ*SSGRAMYKNSA
Trigger: CGCAGAGTTTTTGTACATTGCCCGGCCGCTGCTGCACTGTATCCTTAGCGCGGGGCAGGATAGGGCTGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527371.1
CDS CAA 90 bp TCTCTGTCCAGTGGAACGATAGGGGGTGAAGTCTGGAGGCCAGCCTaGAACCAGAGCAGCAGGAGCATCCGCAGTACAGCCCCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: SLSSGTIGGEVWRPA*NQSSRSIRSTAPAL
Trigger: CAGAGCTGGGGCTGTACTGCGGATGCTCCTGCTGCTCTGGTTCAAGGCTGGCCTCCAGACTTCACCCCCTATCGTTCCACTGGACAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532554.5
CDS GCA 72 bp TCCTTCCTGCTTCCGGTCTTAGGCCCGCCTCTTGGTTaGTTAACTTCCGCGGGCCAGAAGGCTGAGGACTTG +
Preference number: 6 (lower is better)
Translates to: SFLLPVLGPPLG*LTSAGQKAEDL
Trigger: CAAGTCCTCAGCCTTCTGGCCCGCGGAAGTTAAGCAACCAAGAGGCGGGCCTAAGACCGGAAGCAGGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525192.5
ENST00000528674.5
ENST00000529030.1
CDS GCA 72 bp AACCTCACTGAGCTTCTTCCCAGCTCTGACAGCTCGTaGGAATCGGCGAATCGACTCCTGGTAGCGGAGGCC +
Preference number: 6 (lower is better)
Translates to: NLTELLPSSDSS*ESANRLLVAEA
Trigger: GGCCTCCGCTACCAGGAGTCGATTCGCCGATTCGCACGAGCTGTCAGAGCTGGGAAGAAGCTCAGTGAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528674.5
CDS GCA 72 bp GCCCAGAAGGAACTGATCAAAGGTCAGGGTGGCACCTaGCAGCAGGTAACTGAAGCCCCGCACTGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: AQKELIKGQGGT*QQVTEAPHCCL
Trigger: GAGACAGCAGTGCGGGGCTTCAGTTACCTGCTGGCAGGTGCCACCCTGACCTTTGATCAGTTCCTTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525229.5
CDS GCA 72 bp AGGTTAGAGGCAGAGTACACCAGCTCTGACAGCTCGTaGGAATCGGCGAATCGACTCCTGGTAGCGGAGGCC +
Preference number: 6 (lower is better)
Translates to: RLEAEYTSSDSS*ESANRLLVAEA
Trigger: GGCCTCCGCTACCAGGAGTCGATTCGCCGATTCGCACGAGCTGTCAGAGCTGGTGTACTCTGCCTCTAACCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525192.5
CDS GCA 72 bp AGGTTAGAGGCAGAGTACACCAGCTCTGACAGCTCGTaGGAATCGGCGAATCGACCGGGTTGGCTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: RLEAEYTSSDSS*ESANRPGWLPL
Trigger: CAAGGGCAGCCAACCCGGTCGATTCGCCGATTCGCACGAGCTGTCAGAGCTGGTGTACTCTGCCTCTAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS CCA 72 bp TCTAGAGAAGGGAGCTGGAGCCCCGAGTCTTTCCAATaGAACGCCGAGAGACTCGAACGGCAGGGCCGGATT +
Preference number: 6 (lower is better)
Translates to: SREGSWSPESFQ*NAERLERQGRI
Trigger: AATCCGGCCCTGCCGTTCGAGTCTCTCGGCGTTCCATTGGAAAGACTCGGGGCTCCAGCTCCCTTCTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS TCA 72 bp GCCTCTTGGTTGCTTAACTTCCGCGGGCCAGAAGGCTaGGGACTTGAAGAACCGGTGAACCACCCTTCACCC +
Preference number: 6 (lower is better)
Translates to: ASWLLNFRGPEG*GLEEPVNHPSP
Trigger: GGGTGAAGGGTGGTTCACCGGTTCTTCAAGTCCTCAGCCTTCTGGCCCGCGGAAGTTAAGCAACCAAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525192.5
ENST00000528674.5
ENST00000529030.1
CDS GCA 72 bp TCAGATTTGGGGAGGTGCGGGGCGTCTAAATACAGTTaGACTGTGTCTCAGCAGGCGCGCGTTCGGCCAGTA +
Preference number: 6 (lower is better)
Translates to: SDLGRCGASKYS*TVSQQARVRPV
Trigger: TACTGGCCGAACGCGCGCCTGCTGAGACACAGTGCAACTGTATTTAGACGCCCCGCACCTCCCCAAATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS CCA 72 bp GCGGCAGTCAGAGCAGTTCATTCTAGAGAAGGGAGCTaGAGCCCCGAGTCTTTCCAATGGAACGCCGAGAGA +
Preference number: 6 (lower is better)
Translates to: AAVRAVHSREGS*SPESFQWNAER
Trigger: TCTCTCGGCGTTCCATTGGAAAGACTCGGGGCTCCAGCTCCCTTCTCTAGAATGAACTGCTCTGACTGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532681.5
CDS CAA 90 bp GAGGTAGTTACAATCTGGGAATCCTGGAATCTGGGAGATCTAGACTaGAATCTTGGTTCTGGGACCATCAGTGACTGTTCTCTAACCTCA +
Preference number: 6 (lower is better)
Translates to: EVVTIWESWNLGDLD*NLGSGTISDCSLTS
Trigger: TGAGGTTAGAGAACAGTCACTGATGGTCCCAGAACCAAGATTCAAGTCTAGATCTCCCAGATTCCAGGATTCCCAGATTGTAACTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1
CDS CAA 72 bp ACAATCTGGGAATCCTGGAATCTGGGAGATCTAGACTaGAATCTTGGTTCTGGGACCATCAGTGACTGTTCT +
Preference number: 6 (lower is better)
Translates to: TIWESWNLGDLD*NLGSGTISDCS
Trigger: AGAACAGTCACTGATGGTCCCAGAACCAAGATTCAAGTCTAGATCTCCCAGATTCCAGGATTCCCAGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528674.5
ENST00000529030.1