Pregenerated sensors for PEX12 (Homo sapiens)
Ensembl gene IDs: ENSG00000108733Ensembl transcript IDs: ENST00000225873.9, ENST00000585380.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTTaGAAACTGATGAAATTTCCACCTTACAGACAGGCAGGTAAATGC | + |
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Preference number: 1 (lower is better) Translates to: FLSISIKSKSAFLIV*KLMKFPPYRQAGKC Trigger: GCATTTACCTGCCTGTCTGTAAGGTGGAAATTTCATCAGTTTGCAAACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| 3UTR-3UTR TCA 90 bp | CTTATCGTTTGCAAACTGATGAAATTTCCACCTTACAGACAGGCAGGTAAATGCATCCCCTGCCAGTCCTaGTCCTTCTACTTTAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LIVCKLMKFPPYRQAGKCIPCQS*SFYFKQ Trigger: CTGCTTAAAGTAGAAGGATCAGGACTGGCAGGGGAT...GCATTTACCTGCCTGTCTGTAAGGTGGAAATTTCATCAGTTTGCAAACGATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| 3UTR-3UTR TCA 90 bp | CCCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTCTGAAACCAGCTCTGTaGCATTACAGCGCAATACTT | + |
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Preference number: 2 (lower is better) Translates to: PQSVSKHFYQEQVCISYRLKPAL*HYSAIL Trigger: AAGTATTGCGCTGTAATGTCACAGAGCTGGTTTCAG...ACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTCATTGCTTGTTAGCTTTGCTTTTACACAGGAATCTTCAGACTACTCTCTTATGCGGTCTAACCTaGGTTTTTCGTAAGAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: CLHCLLALLLHRNLQTTLLCGLT*VFRKSS Trigger: GGAGCTCTTACGAAAAACCCAGGTTAGACCGCATAA...GAGAGTAGTCTGAAGATTCCTGTGTAAAAGCAAAGCTAACAAGCAATGAAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| 3UTR-3UTR GCA 90 bp | CTTATCGTTTGCAAACTGATGAAATTTCCACCTTACAGACAGGCAGGTAAATGCTCTAAAAAGAAGTCTTaGTACCACCTCACTGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: LIVCKLMKFPPYRQAGKCSKKKS*YHLTVH Trigger: GTGAACAGTGAGGTGGTAGCAAGACTTCTTTTTAGA...GCATTTACCTGCCTGTCTGTAAGGTGGAAATTTCATCAGTTTGCAAACGATAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| 3UTR TCA 72 bp | GAATTGAGGCTGAGAAGTGTCAACTCAATACCATGCTaGAACCAGCTCTGTGACATTACAGCGCAATACTTT | + |
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Preference number: 3 (lower is better) Translates to: ELRLRSVNSIPC*NQLCDITAQYF Trigger: AAAGTATTGCGCTGTAATGTCACAGAGCTGGTTTCAGCATGGTATTGAGTTGACACTTCTCAGCCTCAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| 3UTR-3UTR CAA 90 bp | CTTATCGTTTGCAAACTGATGAAATTTCCACCTTACAGACAGGCAGGTAAATGCGGGATAGGCAAAAACTaGTGTACTCATTATTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: LIVCKLMKFPPYRQAGKCGIGKN*CTHYSV Trigger: AACAGAATAATGAGTACACAAGTTTTTGCCTATCCC...GCATTTACCTGCCTGTCTGTAAGGTGGAAATTTCATCAGTTTGCAAACGATAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| 3UTR GCA 72 bp | ATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTTaGAAACTGATGAAATTTCCACCTTACAGACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: ISIKSKSAFLIV*KLMKFPPYRQA Trigger: TGCCTGTCTGTAAGGTGGAAATTTCATCAGTTTGCAAACGATAAGAAATGCAGACTTGCTCTTGATAGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR GCA 90 bp | CCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTGCCCGCGCCCGTCCTTaGTCGCTGACCCCAGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: PRVFLSISIKSKSAFLIVARARP*SLTPGE Trigger: CTCGCCTGGGGTCAGCGAGCAAGGACGGGCGCGGGC...AACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CCCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTCCCGTCCTTGCTCGCTaGCCCCAGGCGAGGCGCAAA | + |
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Preference number: 4 (lower is better) Translates to: PQSVSKHFYQEQVCISYRPVLAR*PQARRK Trigger: TTTGCGCCTCGCCTGGGGTCAGCGAGCAAGGACGGG...ACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CCCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTCCAGCTGTTGGCTTTaGGTATCCCCGCCCGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: PQSVSKHFYQEQVCISYRSSCWL*VSPPAP Trigger: GGGCGCGGGCGGGGATACTCAAAGCCAACAGCTGGA...ACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CTTATCGTTTGCAAACTGATGAAATTTCCACCTTACAGACAGGCAGGTAAATGCCGTCAGGGCAGAGCGTaGCTGTGGGGGACAGGTATG | + |
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Preference number: 4 (lower is better) Translates to: LIVCKLMKFPPYRQAGKCRQGRA*LWGTGM Trigger: CATACCTGTCCCCCACAGTCACGCTCTGCCCTGACG...GCATTTACCTGCCTGTCTGTAAGGTGGAAATTTCATCAGTTTGCAAACGATAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTTCAGTCGTGCCACTGTaGGCCCGGGACACAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PRVFLSISIKSKSAFLIVSVVPL*ARDTRA Trigger: AGCCCTTGTGTCCCGGGCTCACAGTGGCACGACTGA...AACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR GCA 90 bp | CAATACCATGCTGAAACCAGCTCTGTGACATTACAGCGCAATACTTTTGTTGTGCTGAGGATTCAGTCGTaGCACTGTGAGCCCGGGACA | + |
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Preference number: 4 (lower is better) Translates to: QYHAETSSVTLQRNTFVVLRIQS*HCEPGT Trigger: TGTCCCGGGCTCACAGTGGCACGACTGAATCCTCAG...CACAACAAAAGTATTGCGCTGTAATGTCACAGAGCTGGTTTCAGCATGGTATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CTTATCGTTTGCAAACTGATGAAATTTCCACCTTACAGACAGGCAGGTAAATGCCCACGACGCCACGTTTaGAGGGAGGTCTCCGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: LIVCKLMKFPPYRQAGKCPRRHV*REVSAL Trigger: TAAAGCGGAGACCTCCCTTCAAACGTGGCGTCGTGG...GCATTTACCTGCCTGTCTGTAAGGTGGAAATTTCATCAGTTTGCAAACGATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | TGTCTTCATTGCTTGTTAGCTTTGCTTTTACACAGGAATCTTCAGACTACTCTCCCTCCTCCCCAATCGTaGGAGCTCAAAAGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: CLHCLLALLLHRNLQTTLPPPQS*ELKSQP Trigger: CGGCTGGCTTTTGAGCTCTCACGATTGGGGAGGAGG...GAGAGTAGTCTGAAGATTCCTGTGTAAAAGCAAAGCTAACAAGCAATGAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CTTATCGTTTGCAAACTGATGAAATTTCCACCTTACAGACAGGCAGGTAAATGCGAAGCAGCTGTGAAGTaGGCCCCGTGCTCAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: LIVCKLMKFPPYRQAGKCEAAVK*APCSAI Trigger: TATGGCTGAGCACGGGGCTCACTTCACAGCTGCTTC...GCATTTACCTGCCTGTCTGTAAGGTGGAAATTTCATCAGTTTGCAAACGATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR GCA 90 bp | TGTCTTCATTGCTTGTTAGCTTTGCTTTTACACAGGAATCTTCAGACTACTCTCGCAATCCTCTGGAGCTaGGAACCAGAAACGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: CLHCLLALLLHRNLQTTLAILWS*EPETPP Trigger: AGGGGGCGTTTCTGGTTCGCAGCTCCAGAGGATTGC...GAGAGTAGTCTGAAGATTCCTGTGTAAAAGCAAAGCTAACAAGCAATGAAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR CCA 90 bp | CAATACCATGCTGAAACCAGCTCTGTGACATTACAGCGCAATACTTTTGTTGTGAGGAACGCAATCCTCTaGAGCTGCGAACCAGAAACG | + |
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Preference number: 4 (lower is better) Translates to: QYHAETSSVTLQRNTFVVRNAIL*SCEPET Trigger: CGTTTCTGGTTCGCAGCTCCAGAGGATTGCGTTCCT...CACAACAAAAGTATTGCGCTGTAATGTCACAGAGCTGGTTTCAGCATGGTATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTAAAGCCAGCCGACTCTaGGGATTCAGTCGTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: PRVFLSISIKSKSAFLIVKASRL*GFSRAT Trigger: AGTGGCACGACTGAATCCTCAGAGTCGGCTGGCTTT...AACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR CCA 90 bp | CTTATCGTTTGCAAACTGATGAAATTTCCACCTTACAGACAGGCAGGTAAATGCGGTGGAAGTAGTATGTaGCGAGGGGGTAACTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LIVCKLMKFPPYRQAGKCGGSSM*RGGNLS Trigger: TGACAAGTTACCCCCTCGCCACATACTACTTCCACC...GCATTTACCTGCCTGTCTGTAAGGTGGAAATTTCATCAGTTTGCAAACGATAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTATTCTGCAAGAACCTTaGCCACATGCTGAAGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: PRVFLSISIKSKSAFLIVILQEP*PHAEER Trigger: CCGCTCTTCAGCATGTGGTCAAGGTTCTTGCAGAAT...AACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTATCCCCTGCCAGTCCTaGTCCTTCTACTTTAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PRVFLSISIKSKSAFLIVIPCQS*SFYFKQ Trigger: CTGCTTAAAGTAGAAGGATCAGGACTGGCAGGGGAT...AACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR CCA 90 bp | CCCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTAAGTTAACTCGGACGTaGGTGGAAGTAGTATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PQSVSKHFYQEQVCISYRKLTRT*VEVVCG Trigger: GCCACATACTACTTCCACCCACGTCCGAGTTAACTT...ACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CTTATCGTTTGCAAACTGATGAAATTTCCACCTTACAGACAGGCAGGTAAATGCCTGAAACCAGCTCTGTaGCATTACAGCGCAATACTT | + |
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Preference number: 4 (lower is better) Translates to: LIVCKLMKFPPYRQAGKCLKPAL*HYSAIL Trigger: AAGTATTGCGCTGTAATGTCACAGAGCTGGTTTCAG...GCATTTACCTGCCTGTCTGTAAGGTGGAAATTTCATCAGTTTGCAAACGATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CCCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTAACTCAATACCATGCTaGAACCAGCTCTGTGACATT | + |
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Preference number: 4 (lower is better) Translates to: PQSVSKHFYQEQVCISYRNSIPC*NQLCDI Trigger: AATGTCACAGAGCTGGTTTCAGCATGGTATTGAGTT...ACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR CCA 90 bp | CTTATCGTTTGCAAACTGATGAAATTTCCACCTTACAGACAGGCAGGTAAATGCACACAGTCTTCATTTTaGGTAAGAGGGGAGAATCAG | + |
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Preference number: 4 (lower is better) Translates to: LIVCKLMKFPPYRQAGKCTQSSF*VRGENQ Trigger: CTGATTCTCCCCTCTTACCCAAAATGAAGACTGTGT...GCATTTACCTGCCTGTCTGTAAGGTGGAAATTTCATCAGTTTGCAAACGATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR CCA 90 bp | CCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTTTATGCGGTCTAACCTaGGTTTTTCGTAAGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PRVFLSISIKSKSAFLIVLCGLT*VFRKSS Trigger: GGAGCTCTTACGAAAAACCCAGGTTAGACCGCATAA...AACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR TCA 90 bp | CCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTTGTGAGGATAAGACATaGTTCCCTTTCAGTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PRVFLSISIKSKSAFLIVCEDKT*FPFSSQ Trigger: CTGAGAACTGAAAGGGAATCATGTCTTATCCTCACA...AACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR GCA 90 bp | TGTCTTCATTGCTTGTTAGCTTTGCTTTTACACAGGAATCTTCAGACTACTCTCTCTAAAAAGAAGTCTTaGTACCACCTCACTGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: CLHCLLALLLHRNLQTTLSKKKS*YHLTVH Trigger: GTGAACAGTGAGGTGGTAGCAAGACTTCTTTTTAGA...GAGAGTAGTCTGAAGATTCCTGTGTAAAAGCAAAGCTAACAAGCAATGAAGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR GCA 90 bp | CCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTTATCAAGAGCAAGTCTaGATTTCTTATCGTTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: PRVFLSISIKSKSAFLIVYQEQV*ISYRLQ Trigger: TTGCAAACGATAAGAAATGCAGACTTGCTCTTGATA...AACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR CAA 90 bp | CCCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTCGCCCGCGCCCGTCCTaGCTCGCTGACCCCAGGCGA | + |
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Preference number: 5 (lower is better) Translates to: PQSVSKHFYQEQVCISYRRPRPS*LADPRR Trigger: TCGCCTGGGGTCAGCGAGCAAGGACGGGCGCGGGCG...ACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS CCA 90 bp | CCGCTGAAACAGAAGAGGGCCCTTGTGGGCTGGTTTTGGCTAGTTTaGTTTACTTTTCGTAGCTGGGTCTGCATGGTAGCCTCGCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: PLKQKRALVGWFWLV*FTFRSWVCMVASLE Trigger: TTCCAGCGAGGCTACCATGCAGACCCAGCTACGAAAAGTAAACCAAACTAGCCAAAACCAGCCCACAAGGGCCCTCTTCTGTTTCAGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585380.1 |
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| CDS GCA 90 bp | GTGGGCTGGTTTTGGCTAGTTTGGTTTACTTTTCGTAGCTGGGTCTaGATGGTAGCCTCGCTGGAAAGCTACAGCTCTGAACCTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: VGWFWLVWFTFRSWV*MVASLESYSSEPLS Trigger: AGAGAGAGGTTCAGAGCTGTAGCTTTCCAGCGAGGCTACCATGCAGACCCAGCTACGAAAAGTAAACCAAACTAGCCAAAACCAGCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585380.1 |
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| CDS-3UTR CAA 90 bp | CCCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTCTCCAGCTGTTGGCTTaGAGTATCCCCGCCCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: PQSVSKHFYQEQVCISYRLQLLA*SIPARA Trigger: GGCGCGGGCGGGGATACTCAAAGCCAACAGCTGGAG...ACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR CAA 90 bp | CAATACCATGCTGAAACCAGCTCTGTGACATTACAGCGCAATACTTTTGTTGTGCCCACGACGCCACGTTaGAAGGGAGGTCTCCGCTTT | + |
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Preference number: 5 (lower is better) Translates to: QYHAETSSVTLQRNTFVVPTTPR*KGGLRF Trigger: AAAGCGGAGACCTCCCTTCAAACGTGGCGTCGTGGG...CACAACAAAAGTATTGCGCTGTAATGTCACAGAGCTGGTTTCAGCATGGTATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR CAA 90 bp | TGTCTTCATTGCTTGTTAGCTTTGCTTTTACACAGGAATCTTCAGACTACTCTCTGGCGAGGGGGTAACTaGTCAAATGCTGCACGTCAG | + |
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Preference number: 5 (lower is better) Translates to: CLHCLLALLLHRNLQTTLWRGGN*SNAARQ Trigger: CTGACGTGCAGCATTTGACAAGTTACCCCCTCGCCA...GAGAGTAGTCTGAAGATTCCTGTGTAAAAGCAAAGCTAACAAGCAATGAAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR CAA 90 bp | CCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTCACACAGTCTTCATTTaGGGTAAGAGGGGAGAATCA | + |
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Preference number: 5 (lower is better) Translates to: PRVFLSISIKSKSAFLIVHTVFI*GKRGES Trigger: TGATTCTCCCCTCTTACCCAAAATGAAGACTGTGTG...AACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR CAA 90 bp | CCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTGGGATAGGCAAAAACTaGTGTACTCATTATTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: PRVFLSISIKSKSAFLIVGIGKN*CTHYSV Trigger: AACAGAATAATGAGTACACAAGTTTTTGCCTATCCC...AACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS-3UTR CAA 90 bp | CCCAGAGTGTTTCTAAGCATTTCTATCAAGAGCAAGTCTGCATTTCTTATCGTTCATTGCTTGTTAGCTTaGCTTTTACACAGGAATCTT | + |
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Preference number: 5 (lower is better) Translates to: PRVFLSISIKSKSAFLIVHCLLA*LLHRNL Trigger: AAGATTCCTGTGTAAAAGCAAAGCTAACAAGCAATG...AACGATAAGAAATGCAGACTTGCTCTTGATAGAAATGCTTAGAAACACTCTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000225873.9 |
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| CDS TCA 72 bp | GGTCTGCATGGTAGCCTCGCTGGAAAGCTACAGCTCTaGACCTCTCTCTGCGAGGTCTTTTTGACAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GLHGSLAGKLQL*TSLCEVFLTSC Trigger: ACAGCTTGTCAAAAAGACCTCGCAGAGAGAGGTTCAGAGCTGTAGCTTTCCAGCGAGGCTACCATGCAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585380.1 |
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| CDS CCA 72 bp | CAGAAGAGGGCCCTTGTGGGCTGGTTTTGGCTAGTTTaGTTTACTTTTCGTAGCTGGGTCTGCATGGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: QKRALVGWFWLV*FTFRSWVCMVA Trigger: GGCTACCATGCAGACCCAGCTACGAAAAGTAAACCAAACTAGCCAAAACCAGCCCACAAGGGCCCTCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585380.1 |
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| CDS CCA 72 bp | GGCTGGTTTTGGCTAGTTTGGTTTACTTTTCGTAGCTaGGTCTGCATGGTAGCCTCGCTGGAAAGCTACAGC | + |
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Preference number: 6 (lower is better) Translates to: GWFWLVWFTFRS*VCMVASLESYS Trigger: GCTGTAGCTTTCCAGCGAGGCTACCATGCAGACCCAGCTACGAAAAGTAAACCAAACTAGCCAAAACCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585380.1 |
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| CDS GCA 72 bp | TTTTGGCTAGTTTGGTTTACTTTTCGTAGCTGGGTCTaGATGGTAGCCTCGCTGGAAAGCTACAGCTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FWLVWFTFRSWV*MVASLESYSSE Trigger: TTCAGAGCTGTAGCTTTCCAGCGAGGCTACCATGCAGACCCAGCTACGAAAAGTAAACCAAACTAGCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585380.1 |
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