Pregenerated sensors for PEX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000127980Ensembl transcript IDs: ENST00000248633.9, ENST00000422866.1, ENST00000428214.5, ENST00000438045.5, ENST00000469417.1, ENST00000476923.1, ENST00000477342.1, ENST00000484913.5, ENST00000496092.1, ENST00000496420.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAAGCCTTTTTCCTCGTAAAGCTTTACAGTCAACTCTCTCCACATaGGCATCCAGTTTGTCAAATGCTTCTTTACAGATTGCTTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: SSLFPRKALQSTLST*ASSLSNASLQIALA Trigger: AGCCAAAGCAATCTGTAAAGAAGCATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGACTGTAAAGCTTTACGAGGAAAAAGGCTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| 3UTR CCA 72 bp | TTTCCTCGTAAAGCTTTACAGTCAACTCTCTCCACATaGGCATCCAGTTTGTCAAATGCTTCTTTACAGATT | + |
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Preference number: 3 (lower is better) Translates to: FPRKALQSTLST*ASSLSNASLQI Trigger: AATCTGTAAAGAAGCATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGACTGTAAAGCTTTACGAGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR TCA 90 bp | TCAACTCTCTCCACATGGGCATCCAGTTTGTCAAATGCTTCTTTACAGATTGCTCGTCCCAGGAGGCTGTaGGTGATGTGCTCCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: STLSTWASSLSNASLQIARPRRL*VMCSKE Trigger: CTCCTTGGAGCACATCACTCACAGCCTCCTGGGACG...AGCAATCTGTAAAGAAGCATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR GCA 90 bp | CGTAAAGCTTTACAGTCAACTCTCTCCACATGGGCATCCAGTTTGTCAAATGCTACAAGAGACATCAGCTaGCGAGACAAAGGGCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RKALQSTLSTWASSLSNATRDIS*RDKGRP Trigger: GGGACGCCCTTTGTCTCGGCAGCTGATGTCTCTTGT...AGCATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGACTGTAAAGCTTTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR TCA 90 bp | CCACATGGGCATCCAGTTTGTCAAATGCTTCTTTACAGATTGCTTTGGCTAAAGCCAGGAGGCTGTGAGTaGTGTGCTCCAAGGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: PHGHPVCQMLLYRLLWLKPGGCE*CAPRRI Trigger: TATCCTCCTTGGAGCACATCACTCACAGCCTCCTGG...CTTTAGCCAAAGCAATCTGTAAAGAAGCATTTGACAAACTGGATGCCCATGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR TCA 90 bp | CTTTTTCCTCGTAAAGCTTTACAGTCAACTCTCTCCACATGGGCATCCAGTTTGCCACTGGAGTTATCCTaGCTACGGCATGCATTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LFPRKALQSTLSTWASSLPLELS*LRHAFL Trigger: TAGAAATGCATGCCGTAGTCAGGATAACTCCAGTGG...CAAACTGGATGCCCATGTGGAGAGAGTTGACTGTAAAGCTTTACGAGGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR CCA 90 bp | TTACAGTCAACTCTCTCCACATGGGCATCCAGTTTGTCAAATGCTTCTTTACAGAGGGGTAACTTCCACTaGAGTTATCCTGACTACGGC | + |
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Preference number: 4 (lower is better) Translates to: LQSTLSTWASSLSNASLQRGNFH*SYPDYG Trigger: GCCGTAGTCAGGATAACTCCAGTGGAAGTTACCCCT...CTGTAAAGAAGCATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGACTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR CCA 90 bp | TTACAGTCAACTCTCTCCACATGGGCATCCAGTTTGTCAAATGCTTCTTTACAGCTTCCTCAGGTCATCTaGAATCCAGACTTTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LQSTLSTWASSLSNASLQLPQVI*NPDFPK Trigger: CTTGGGAAAGTCTGGATTCCAGATGACCTGAGGAAG...CTGTAAAGAAGCATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGACTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR TCA 90 bp | TCCACATGGGCATCCAGTTTGTCAAATGCTTCTTTACAGATTGCTTTGGCTAAATTCCCTTTCCTCCTGTaGGTAAAAGAGCTCCATTCC | + |
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Preference number: 4 (lower is better) Translates to: STWASSLSNASLQIALAKFPFLL*VKELHS Trigger: GGAATGGAGCTCTTTTACTCACAGGAGGAAAGGGAA...TTTAGCCAAAGCAATCTGTAAAGAAGCATTTGACAAACTGGATGCCCATGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR CCA 90 bp | CTTTTTCCTCGTAAAGCTTTACAGTCAACTCTCTCCACATGGGCATCCAGTTTGTCAACTCTCTCCACATaGGCATCCAGTTTGTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: LFPRKALQSTLSTWASSLSTLST*ASSLSN Trigger: ATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGA...CAAACTGGATGCCCATGTGGAGAGAGTTGACTGTAAAGCTTTACGAGGAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR GCA 90 bp | CATGGGCATCCAGTTTGTCAAATGCTTCTTTACAGATTGCTTTGGCTAAAGTTGTCCATTCCTAAGTCCTaGAACAAGAGACATCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: HGHPVCQMLLYRLLWLKLSIPKS*NKRHQL Trigger: CAGCTGATGTCTCTTGTTGCAGGACTTAGGAATGGA...CAACTTTAGCCAAAGCAATCTGTAAAGAAGCATTTGACAAACTGGATGCCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR GCA 90 bp | GTCAACTCTCTCCACATGGGCATCCAGTTTGTCAAATGCTTCTTTACAGATTGCATCCTGACTACGGCATaGATTTCTATATTTAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: VNSLHMGIQFVKCFFTDCILTTA*ISIFSL Trigger: GAGACTAAATATAGAAATGCATGCCGTAGTCAGGAT...GCAATCTGTAAAGAAGCATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR CCA 90 bp | GCCTTTTTCCTCGTAAAGCTTTACAGTCAACTCTCTCCACATGGGCATCCAGTTTCTTCTGCAGCAAATTaGGACTCAACAGAAAAATAT | + |
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Preference number: 4 (lower is better) Translates to: AFFLVKLYSQLSPHGHPVSSAAN*DSTEKY Trigger: ATATTTTTCTGTTGAGTCCCAATTTGCTGCAGAAGA...AACTGGATGCCCATGTGGAGAGAGTTGACTGTAAAGCTTTACGAGGAAAAAGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS-3UTR GCA 90 bp | CATGGGCATCCAGTTTGTCAAATGCTTCTTTACAGATTGCTTTGGCTAAAGTTGTGTATTGTAGTCTTCTaGAGCAAATTGGGACTCAAC | + |
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Preference number: 4 (lower is better) Translates to: HGHPVCQMLLYRLLWLKLCIVVF*SKLGLN Trigger: GTTGAGTCCCAATTTGCTGCAGAAGACTACAATACA...CAACTTTAGCCAAAGCAATCTGTAAAGAAGCATTTGACAAACTGGATGCCCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS TCA 90 bp | CCACGAGACGCCGCGGCAGGTGGAGGAAGCAGTCGCGAGCGTTGGTaGAGGCCACAGTCACTGCCGCCCCGCCTCCCCCAGCACCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: PRDAAAGGGSSRERW*RPQSLPPRLPQHPP Trigger: TGGCGGGTGCTGGGGGAGGCGGGGCGGCAGTGACTGTGGCCTTCACCAACGCTCGCGACTGCTTCCTCCACCTGCCGCGGCGTCTCGTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 |
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| CDS TCA 90 bp | GAGACATCAGCTGCCGAGACAAAGGGCGTCCCAGGAGGCTGTGAGTaGTGTGCTCCAAGGAGGATACGCCTAAGGAATTCACTCCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: ETSAAETKGVPGGCE*CAPRRIRLRNSLLP Trigger: TGGGAGGAGTGAATTCCTTAGGCGTATCCTCCTTGGAGCACATCACTCACAGCCTCCTGGGACGCCCTTTGTCTCGGCAGCTGATGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 |
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| CDS TCA 90 bp | CATCAGGACTGTGCTCATGTTCCGGGACAGCAGGCAGTCCAGCAATaGGGTCAAGGTCATCCAGCAGGACAACAGATGGCTGCATCCACA | + |
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Preference number: 5 (lower is better) Translates to: HQDCAHVPGQQAVQQ*GQGHPAGQQMAAST Trigger: TGTGGATGCAGCCATCTGTTGTCCTGCTGGATGACCTTGACCTCATTGCTGGACTGCCTGCTGTCCCGGAACATGAGCACAGTCCTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS TCA 90 bp | GAGACATCAGCTGCCGAGACAAAGGGCGTCCCAGGAGGCTGTGAGTaGTGTGCTCCAAGGAGGATACGCCTAAGGAATTCACTCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: ETSAAETKGVPGGCE*CAPRRIRLRNSLLC Trigger: ACAGAGGAGTGAATTCCTTAGGCGTATCCTCCTTGGAGCACATCACTCACAGCCTCCTGGGACGCCCTTTGTCTCGGCAGCTGATGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496420.5 |
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| CDS TCA 90 bp | GAGACATCAGCTGCCGAGACAAAGGGCGTCCCAGGAGGCTGTGAGTaGTGTGCTCCAAGGAGGATACGCCTAAGGAATTCACTCCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: ETSAAETKGVPGGCE*CAPRRIRLRNSLLC Trigger: ACAAAGGAGTGAATTCCTTAGGCGTATCCTCCTTGGAGCACATCACTCACAGCCTCCTGGGACGCCCTTTGTCTCGGCAGCTGATGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS TCA 90 bp | GGCTGTGAAAACAACTGGTCTTTCCCAGGAACTCCAGGCAAATCCTaGGTCATGGAGCTTGGTGCAGAGAGACATTGTGAGCTCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: GCENNWSFPGTPGKS*VMELGAERHCELCM Trigger: CATGCAGAGCTCACAATGTCTCTCTGCACCAAGCTCCATGACTCAGGATTTGCCTGGAGTTCCTGGGAAAGACCAGTTGTTTTCACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469417.1 |
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| CDS GCA 90 bp | TCATGTAACCCACCAATCTTGTCCCAACCCAGGTCTCTAGGTTTATaGAGGTTGACACTTCGCAAAGACGCAGGAAGAAATCCGCGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SCNPPILSQPRSLGL*RLTLRKDAGRNPRR Trigger: TCTCCGCGGATTTCTTCCTGCGTCTTTGCGAAGTGTCAACCTGCATAAACCTAGAGACCTGGGTTGGGACAAGATTGGTGGGTTACATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS TCA 90 bp | GGCTGTGAAAACAACTGGTCTTTCCCAGGAACTCCAGGCAAATCCTaGGTCATGGAGCTTGGTGCAGAGAGACATTGTGAGCTCAAATCA | + |
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Preference number: 5 (lower is better) Translates to: GCENNWSFPGTPGKS*VMELGAERHCELKS Trigger: TGATTTGAGCTCACAATGTCTCTCTGCACCAAGCTCCATGACTCAGGATTTGCCTGGAGTTCCTGGGAAAGACCAGTTGTTTTCACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS GCA 90 bp | TTCACCTTGATCACTAAAATGCCTGCCTTCCACCCAGCTCAAGAATaGAGGCTGGTGACTCCAGACCACTTCTATAGCTTGATTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: FTLITKMPAFHPAQE*RLVTPDHFYSLILQ Trigger: CTGCAGAATCAAGCTATAGAAGTGGTCTGGAGTCACCAGCCTGCATTCTTGAGCTGGGTGGAAGGCAGGCATTTTAGTGATCAAGGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 |
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| CDS TCA 90 bp | TTCAGATCAGCTCCAGTAAAGGAGTCAGTTACTGATGCTACATGCTaGAGGTCAACATCATCTGCCAGAGGTAGAGAGTCACTGAGGACA | + |
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Preference number: 5 (lower is better) Translates to: FRSAPVKESVTDATC*RSTSSARGRESLRT Trigger: TGTCCTCAGTGACTCTCTACCTCTGGCAGATGATGTTGACCTTCAGCATGTAGCATCAGTAACTGACTCCTTTACTGGAGCTGATCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS TCA 90 bp | CTACATGCTGAAGGTCAACATCATCTGCCAGAGGTAGAGAGTCACTaGGGACATTTAAAATTTCAAGACGTGACACCTGATCAGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LHAEGQHHLPEVESH*GHLKFQDVTPDQEE Trigger: CTCCTCCTGATCAGGTGTCACGTCTTGAAATTTTAAATGTCCTCAGTGACTCTCTACCTCTGGCAGATGATGTTGACCTTCAGCATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 |
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| CDS GCA 90 bp | AATTCTGGATACTTGGCAGGTAACTGGATAGTATCCATGAGTATCTaGCTAACTTCATGTAACCCACCAATCTTGTCCCAACCCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: NSGYLAGNWIVSMSI*LTSCNPPILSQPRS Trigger: AGACCTGGGTTGGGACAAGATTGGTGGGTTACATGAAGTTAGGCAGATACTCATGGATACTATCCAGTTACCTGCCAAGTATCCAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS GCA 90 bp | CTCTCCACTTTGGCTCCGGTATCTGCCTTTGATAATACTGATATCTaGCCTCAGTTGATCTCTTTGTTCTTGTGTAAGTTCTTGGCAACC | + |
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Preference number: 5 (lower is better) Translates to: LSTLAPVSAFDNTDI*PQLISLFLCKFLAT Trigger: GGTTGCCAAGAACTTACACAAGAACAAAGAGATCAACTGAGGGCAGATATCAGTATTATCAAAGGCAGATACCGGAGCCAAAGTGGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000469417.1 ENST00000484913.5 |
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| CDS GCA 90 bp | TCGTCCTCTTTGGCTCCGGTATCTGCCTTTGATAATACTGATATCTaGCCTCAGTTGATCTCTTTGTTCTTGTGTAAGTTCTTGGCAACC | + |
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Preference number: 5 (lower is better) Translates to: SSSLAPVSAFDNTDI*PQLISLFLCKFLAT Trigger: GGTTGCCAAGAACTTACACAAGAACAAAGAGATCAACTGAGGGCAGATATCAGTATTATCAAAGGCAGATACCGGAGCCAAAGAGGACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496420.5 |
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| CDS-3UTR CAA 90 bp | TCAAGCCTTTTTCCTCGTAAAGCTTTACAGTCAACTCTCTCCACATGGGCATCCACATGGGCATCCAGTTaGTCAAATGCTTCTTTACAG | + |
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Preference number: 5 (lower is better) Translates to: SSLFPRKALQSTLSTWASTWASS*SNASLQ Trigger: CTGTAAAGAAGCATTTGACAAACTGGATGCCCATGT...GGATGCCCATGTGGAGAGAGTTGACTGTAAAGCTTTACGAGGAAAAAGGCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS TCA 90 bp | GTCAGCAACTGGTTAACTACTCGGTCTGTAACTCCTGTATTATCATaGCCCCGCCGAGGAGCAATGGATTCAAATTCATCAAAGAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: VSNWLTTRSVTPVLS*PRRGAMDSNSSKKR Trigger: TCTTTTCTTTGATGAATTTGAATCCATTGCTCCTCGGCGGGGTCATGATAATACAGGAGTTACAGACCGAGTAGTTAACCAGTTGCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS GCA 90 bp | GGAATTTTAGGGGTAACTTCCACTGGAGTTATCCTGACTACGGCATaGATTTCTATATTTAGTCTCTTCCTCAGGTCATCTGGAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: GILGVTSTGVILTTA*ISIFSLFLRSSGIQ Trigger: CTGGATTCCAGATGACCTGAGGAAGAGACTAAATATAGAAATGCATGCCGTAGTCAGGATAACTCCAGTGGAAGTTACCCCTAAAATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000422866.1 ENST00000428214.5 ENST00000484913.5 |
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| CDS TCA 90 bp | CTACATGCTGAAGGTCAACATCATCTGCCAGAGGTAGAGAGTCACTaGGGACATTTAAAATTTCAAGACGTGACACCTGAAAGGAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: LHAEGQHHLPEVESH*GHLKFQDVTPERRK Trigger: TTTTCTCCTTTCAGGTGTCACGTCTTGAAATTTTAAATGTCCTCAGTGACTCTCTACCTCTGGCAGATGATGTTGACCTTCAGCATGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496420.5 |
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| CDS GCA 90 bp | ACTGTAAAATCTCTAGCCACAAACCCGCCAGTTTCTTTAGCTACATaGTGCAGGTCAAGATCGGTGAACTTGTTTATATCACAGTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: TVKSLATNPPVSLAT*CRSRSVNLFISQSN Trigger: ATTGGACTGTGATATAAACAAGTTCACCGATCTTGACCTGCAGCATGTAGCTAAAGAAACTGGCGGGTTTGTGGCTAGAGATTTTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496092.1 ENST00000496420.5 |
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| CDS GCA 90 bp | GGAATTTTAGGGGTAACTTCCACTGGAGTTATCCTGACTACGGCATaGATTTCTATATTTAGTCTCTTCCTCAGGTCATCTGGAATCTGT | + |
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Preference number: 5 (lower is better) Translates to: GILGVTSTGVILTTA*ISIFSLFLRSSGIC Trigger: ACAGATTCCAGATGACCTGAGGAAGAGACTAAATATAGAAATGCATGCCGTAGTCAGGATAACTCCAGTGGAAGTTACCCCTAAAATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438045.5 |
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| CDS-3UTR CAA 90 bp | CTCGTAAAGCTTTACAGTCAACTCTCTCCACATGGGCATCCAGTTTGTCAAATGGTCTTCTGCAGCAAATaGGGACTCAACAGAAAAATA | + |
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Preference number: 5 (lower is better) Translates to: LVKLYSQLSPHGHPVCQMVFCSK*GLNRKI Trigger: TATTTTTCTGTTGAGTCCCAATTTGCTGCAGAAGAC...CATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGACTGTAAAGCTTTACGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS TCA 90 bp | TGTAGCATTTGTTGGGTTTTGGACTCTAAATATGAAATTGTCACCTaGTCAGGAGGAGGACAGTATACACATTTATCTAGTCGACCAGGC | + |
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Preference number: 5 (lower is better) Translates to: CSICWVLDSKYEIVT*SGGGQYTHLSSRPG Trigger: GCCTGGTCGACTAGATAAATGTGTATACTGTCCTCCTCCTGATCAGGTGACAATTTCATATTTAGAGTCCAAAACCCAACAAATGCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496420.5 |
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| CDS GCA 90 bp | GTAAAATCTCTAGCCACAAACCCGCCAGTTTCTTTAGCTACATGCTaGAGGTCAAGATCGGTGAACTTGTTTATATCACAGTCCAATTTA | + |
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Preference number: 5 (lower is better) Translates to: VKSLATNPPVSLATC*RSRSVNLFISQSNL Trigger: TAAATTGGACTGTGATATAAACAAGTTCACCGATCTTGACCTGCAGCATGTAGCTAAAGAAACTGGCGGGTTTGTGGCTAGAGATTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496092.1 ENST00000496420.5 |
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| CDS CCA 90 bp | TGTCACAGTAAAGCTGGGCTCTACATCAAAATATTCCTGGTCCCATaGAAATACATGAATGGCACAGTGTTTATGAAAAACAGAGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: CHSKAGLYIKIFLVP*KYMNGTVFMKNRGC Trigger: GCAACCTCTGTTTTTCATAAACACTGTGCCATTCATGTATTTCCATGGGACCAGGAATATTTTGATGTAGAGCCCAGCTTTACTGTGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000484913.5 |
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| CDS-3UTR CAA 90 bp | TCAACTCTCTCCACATGGGCATCCAGTTTGTCAAATGCTTCTTTACAGATTGCTAAGGAATTCACTCCTTaGTATTGTAGTCTTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: STLSTWASSLSNASLQIAKEFTP*YCSLLQ Trigger: CTGCAGAAGACTACAATACAAAGGAGTGAATTCCTT...AGCAATCTGTAAAGAAGCATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422866.1 |
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| CDS CCA 90 bp | ATATCATTCAAAGCTCGTAAAGCTTTACAGTCAACTCTCTCCACATaGGCATCCAGTTTGTCAAATGCTTCTTTACAGATTGCTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: ISFKARKALQSTLST*ASSLSNASLQIALA Trigger: AGCCAAAGCAATCTGTAAAGAAGCATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGACTGTAAAGCTTTACGAGCTTTGAATGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428214.5 |
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| CDS CCA 90 bp | AAGATTCCAAGTTCAGGTTTTAATAGTAAAACATACTTTCTCTGGTaGATATACTCTGACGAGAGAGTCGAGAATGTATGGCTCGATCCA | + |
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Preference number: 5 (lower is better) Translates to: KIPSSGFNSKTYFLW*IYSDERVENVWLDP Trigger: TGGATCGAGCCATACATTCTCGACTCTCTCGTCAGAGTATATCCACCAGAGAAAGTATGTTTTACTATTAAAACCTGAACTTGGAATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000496092.1 ENST00000496420.5 |
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| CDS TCA 90 bp | TGGAAATACATGAATGGCACAGTGTTTATGAAAAACAGAGGTTGCTaGCGCGTTATATATACTAGGAGGTTGAGATTTGCATACTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: WKYMNGTVFMKNRGC*RVIYTRRLRFAYSE Trigger: TTCAGAGTATGCAAATCTCAACCTCCTAGTATATATAACGCGTCAGCAACCTCTGTTTTTCATAAACACTGTGCCATTCATGTATTTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000484913.5 |
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| CDS TCA 90 bp | CAAGTTCTGATTCATAAGAGCTTCCAAAGTAGAGCCGGTACATATTaGATTTTGATTCATCTGGAAGGATCTCGGACATCTCTAAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: QVLIHKSFQSRAGTY*ILIHLEGSRTSLKK Trigger: TTTCTTTAGAGATGTCCGAGATCCTTCCAGATGAATCAAAATTCAATATGTACCGGCTCTACTTTGGAAGCTCTTATGAATCAGAACTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS CCA 90 bp | GGCTTTGCATCTAATTCAGAATCTTTTTATGCTTTGAGCAAACAGTaGCTAAAGCTTTTCCCTAAGAAAGCTGGTCTTCTAAGGACAATT | + |
|
Preference number: 5 (lower is better) Translates to: GFASNSESFYALSKQ*LKLFPKKAGLLRTI Trigger: AATTGTCCTTAGAAGACCAGCTTTCTTAGGGAAAAGCTTTAGCCACTGTTTGCTCAAAGCATAAAAAGATTCTGAATTAGATGCAAAGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000496420.5 |
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| CDS TCA 90 bp | TCCAGACTTTCCCAAGATGGAGAACTTCTACATTTTTGGTATATTTaGTGGCATTGTTCAATTCTTCAAGTCCATTCCAGACTACTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRLSQDGELLHFWYI*WHCSILQVHSRLLV Trigger: TACAAGTAGTCTGGAATGGACTTGAAGAATTGAACAATGCCATCAAATATACCAAAAATGTAGAAGTTCTCCATCTTGGGAAAGTCTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000422866.1 ENST00000428214.5 ENST00000484913.5 |
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| CDS CAA 90 bp | TGGGCCACGAGACGCCGCGGCAGGTGGAGGAAGCAGTCGCGAGCGTaGGTGAAGGCCACAGTCACTGCCGCCCCGCCTCCCCCAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: WATRRRGRWRKQSRA*VKATVTAAPPPPAP Trigger: GGGTGCTGGGGGAGGCGGGGCGGCAGTGACTGTGGCCTTCACCAACGCTCGCGACTGCTTCCTCCACCTGCCGCGGCGTCTCGTGGCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 |
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| CDS TCA 72 bp | GCCGCGGCAGGTGGAGGAAGCAGTCGCGAGCGTTGGTaGAGGCCACAGTCACTGCCGCCCCGCCTCCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AAAGGGSSRERW*RPQSLPPRLPQ Trigger: CTGGGGGAGGCGGGGCGGCAGTGACTGTGGCCTTCACCAACGCTCGCGACTGCTTCCTCCACCTGCCGCGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 |
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| CDS GCA 72 bp | TCCAGGCTGGAGCGCAGTGGTGTGAACCCAGCTCCCTaGAGCCTCAAACGCCCTGGCAAAGGTGATCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRLERSGVNPAP*SLKRPGKGDPP Trigger: AGGAGGATCACCTTTGCCAGGGCGTTTGAGGCTGCAGGGAGCTGGGTTCACACCACTGCGCTCCAGCCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496420.5 |
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| CDS TCA 72 bp | TGTGCTCATGTTCCGGGACAGCAGGCAGTCCAGCAATaGGGTCAAGGTCATCCAGCAGGACAACAGATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CAHVPGQQAVQQ*GQGHPAGQQMA Trigger: AGCCATCTGTTGTCCTGCTGGATGACCTTGACCTCATTGCTGGACTGCCTGCTGTCCCGGAACATGAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS GCA 72 bp | ATGAGGTCAAGGTCATCCAGCAGGACAACAGATGGCTaGATCCACACTGCCTCTGAGAAAGCCACCTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: MRSRSSSRTTDG*IHTASEKATSR Trigger: CCTAGAGGTGGCTTTCTCAGAGGCAGTGTGGATGCAGCCATCTGTTGTCCTGCTGGATGACCTTGACCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS CAA 90 bp | AACCCACCAATCTTGTCCCAACCCAGGTCTCTAGGTTTATGCAGGTaGACACTTCGCAAAGACGCAGGAAGAAATCCGCGGAGAGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NPPILSQPRSLGLCR*TLRKDAGRNPRRAF Trigger: AAAGGCTCTCCGCGGATTTCTTCCTGCGTCTTTGCGAAGTGTCAACCTGCATAAACCTAGAGACCTGGGTTGGGACAAGATTGGTGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS CAA 72 bp | ATCTTGTCCCAACCCAGGTCTCTAGGTTTATGCAGGTaGACACTTCGCAAAGACGCAGGAAGAAATCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ILSQPRSLGLCR*TLRKDAGRNPR Trigger: CCGCGGATTTCTTCCTGCGTCTTTGCGAAGTGTCAACCTGCATAAACCTAGAGACCTGGGTTGGGACAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS CCA 72 bp | AGACCATTGAAGACAGACTTAGGTCACTATCAGAGCTaGAACTTCCATCCTGGAGTCCACTCGAGAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RPLKTDLGHYQS*NFHPGVHSRAA Trigger: TGCTGCTCTCGAGTGGACTCCAGGATGGAAGTTCCAGCTCTGATAGTGACCTAAGTCTGTCTTCAATGGTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS CAA 72 bp | TCCCAGGAACTCCAGGCAAATCCTGAGTCATGGAGCTaGGTGCAGAGAGACATTGTGAGCTCAAATCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SQELQANPESWS*VQRDIVSSNQK Trigger: CTTCTGATTTGAGCTCACAATGTCTCTCTGCACCAAGCTCCATGACTCAGGATTTGCCTGGAGTTCCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS CAA 72 bp | CTGACTAATAGCCAGTCTGGTTTTGATTGGTCCTGGTaGGTTCATGGATTCGTCCTCTCCACTTTGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LTNSQSGFDWSW*VHGFVLSTLAP Trigger: CGGAGCCAAAGTGGAGAGGACGAATCCATGAACCAACCAGGACCAATCAAAACCAGACTGGCTATTAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 |
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| CDS TCA 72 bp | AACAGCATGCAGCTCCAGTATCTCCCAATCATCTGCTaGGAGGGGTTCCACCTCAACTTGTTGACAAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: NSMQLQYLPIIC*EGFHLNLLTRY Trigger: GTATCTTGTCAACAAGTTGAGGTGGAACCCCTCTCAGCAGATGATTGGGAGATACTGGAGCTGCATGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000248633.9 ENST00000428214.5 |
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| CDS GCA 72 bp | CCACCAATCTTGTCCCAACCCAGGTCTCTAGGTTTATaGAGGTTGACACTTCGCAAAGACGCAGGAAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PPILSQPRSLGL*RLTLRKDAGRN Trigger: ATTTCTTCCTGCGTCTTTGCGAAGTGTCAACCTGCATAAACCTAGAGACCTGGGTTGGGACAAGATTGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS CAA 72 bp | CTGACTAATAGCCAGTCTGGTTTTGATTGGTCCTGGTaGGTTCATGGATTCGTCCTCTTTGGCTCCGGTATC | + |
|
Preference number: 6 (lower is better) Translates to: LTNSQSGFDWSW*VHGFVLFGSGI Trigger: GATACCGGAGCCAAAGAGGACGAATCCATGAACCAACCAGGACCAATCAAAACCAGACTGGCTATTAGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496420.5 |
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| CDS TCA 72 bp | GCTCCAGTAAAGGAGTCAGTTACTGATGCTACATGCTaGAGGTCAACATCATCTGCCAGAGGTAGAGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: APVKESVTDATC*RSTSSARGRES Trigger: TGACTCTCTACCTCTGGCAGATGATGTTGACCTTCAGCATGTAGCATCAGTAACTGACTCCTTTACTGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS CAA 90 bp | ATAGTATCCATGAGTATCTGCCTAACTTCATGTAACCCACCAATCTaGTCCCAACCCAGGTCTCTAGGTTTATGCAGGTTGACACTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: IVSMSICLTSCNPPI*SQPRSLGLCRLTLR Trigger: GCGAAGTGTCAACCTGCATAAACCTAGAGACCTGGGTTGGGACAAGATTGGTGGGTTACATGAAGTTAGGCAGATACTCATGGATACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS TCA 72 bp | GAAAATGTATTCTCTTTGGCTCGGCGTGTCTTTGGCTaGATAAGGAGTTTGGTGTCAGTTTCCAGCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ENVFSLARRVFG*IRSLVSVSSLP Trigger: TGGAAGGCTGGAAACTGACACCAAACTCCTTATTCAGCCAAAGACACGCCGAGCCAAAGAGAATACATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000484913.5 |
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| CDS GCA 72 bp | CTAGCCACAAACCCGCCAGTTTCTTTAGCTACATGCTaGAGGTCAAGATCGGTGAACTTGTTTATATCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LATNPPVSLATC*RSRSVNLFISQ Trigger: CTGTGATATAAACAAGTTCACCGATCTTGACCTGCAGCATGTAGCTAAAGAAACTGGCGGGTTTGTGGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496092.1 ENST00000496420.5 |
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| CDS CAA 72 bp | ATGAGTATCTGCCTAACTTCATGTAACCCACCAATCTaGTCCCAACCCAGGTCTCTAGGTTTATGCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: MSICLTSCNPPI*SQPRSLGLCRL Trigger: CAACCTGCATAAACCTAGAGACCTGGGTTGGGACAAGATTGGTGGGTTACATGAAGTTAGGCAGATACTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS TCA 72 bp | TGGTTAACTACTCGGTCTGTAACTCCTGTATTATCATaGCCCCGCCGAGGAGCAATGGATTCAAATTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: WLTTRSVTPVLS*PRRGAMDSNSS Trigger: TGATGAATTTGAATCCATTGCTCCTCGGCGGGGTCATGATAATACAGGAGTTACAGACCGAGTAGTTAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS GCA 72 bp | GGGGTAACTTCCACTGGAGTTATCCTGACTACGGCATaGATTTCTATATTTAGTCTCTTCCTCAGGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GVTSTGVILTTA*ISIFSLFLRSS Trigger: AGATGACCTGAGGAAGAGACTAAATATAGAAATGCATGCCGTAGTCAGGATAACTCCAGTGGAAGTTACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000248633.9 ENST00000422866.1 ENST00000428214.5 ENST00000438045.5 ENST00000476923.1 ENST00000484913.5 |
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| CDS GCA 72 bp | TCTCTAGCCACAAACCCGCCAGTTTCTTTAGCTACATaGTGCAGGTCAAGATCGGTGAACTTGTTTATATCA | + |
|
Preference number: 6 (lower is better) Translates to: SLATNPPVSLAT*CRSRSVNLFIS Trigger: TGATATAAACAAGTTCACCGATCTTGACCTGCAGCATGTAGCTAAAGAAACTGGCGGGTTTGTGGCTAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496092.1 ENST00000496420.5 |
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| CDS TCA 72 bp | GAAGGTCAACATCATCTGCCAGAGGTAGAGAGTCACTaGGGACATTTAAAATTTCAAGACGTGACACCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: EGQHHLPEVESH*GHLKFQDVTPD Trigger: ATCAGGTGTCACGTCTTGAAATTTTAAATGTCCTCAGTGACTCTCTACCTCTGGCAGATGATGTTGACCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 |
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| CDS TCA 72 bp | TTTGGTTTTCTTTACCAGTATCTCCCAATCATCTGCTaGGAGGGGTTCCACCTCAACTTGTTGACAAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: FGFLYQYLPIIC*EGFHLNLLTRY Trigger: GTATCTTGTCAACAAGTTGAGGTGGAACCCCTCTCAGCAGATGATTGGGAGATACTGGTAAAGAAAACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484913.5 |
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| CDS TCA 72 bp | GAAGGTCAACATCATCTGCCAGAGGTAGAGAGTCACTaGGGACATTTAAAATTTCAAGACGTGACACCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: EGQHHLPEVESH*GHLKFQDVTPE Trigger: TTCAGGTGTCACGTCTTGAAATTTTAAATGTCCTCAGTGACTCTCTACCTCTGGCAGATGATGTTGACCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496420.5 |
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| CDS GCA 72 bp | TACTTGGCAGGTAACTGGATAGTATCCATGAGTATCTaGCTAACTTCATGTAACCCACCAATCTTGTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: YLAGNWIVSMSI*LTSCNPPILSQ Trigger: TTGGGACAAGATTGGTGGGTTACATGAAGTTAGGCAGATACTCATGGATACTATCCAGTTACCTGCCAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS CCA 72 bp | GCGGACCATACAACAGTATTCCTGTTCTTTGTCGTATaGGCAAGTTTGCAAATAATTCTGGATACTTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ADHTTVFLFFVV*ASLQIILDTWQ Trigger: CTGCCAAGTATCCAGAATTATTTGCAAACTTGCCCATACGACAAAGAACAGGAATACTGTTGTATGGTCCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS CAA 72 bp | AAACAAGTAAAGGATGTAGAGATTGCTGAGACTGACTaGTGGCAATCAGTGCAACCAAACTTCCCATGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KQVKDVEIAETD*WQSVQPNFPWR Trigger: TCTCCATGGGAAGTTTGGTTGCACTGATTGCCACAAGTCAGTCTCAGCAATCTCTACATCCTTTACTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS CAA 72 bp | TTCACATCTTTGTTCCTGATTAGGAGGCTGAATGTGTaGGACGCACTGAAATATGTGAACTCCTTGAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FTSLFLIRRLNV*DALKYVNSLSR Trigger: TCTGCTCAAGGAGTTCACATATTTCAGTGCGTCCAACACATTCAGCCTCCTAATCAGGAACAAAGATGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS GCA 72 bp | TTGGCTCCGGTATCTGCCTTTGATAATACTGATATCTaGCCTCAGTTGATCTCTTTGTTCTTGTGTAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LAPVSAFDNTDI*PQLISLFLCKF Trigger: GAACTTACACAAGAACAAAGAGATCAACTGAGGGCAGATATCAGTATTATCAAAGGCAGATACCGGAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000469417.1 ENST00000477342.1 ENST00000484913.5 ENST00000496420.5 |
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| CDS CAA 72 bp | ATATCCCGAACAGCTTGTTCACTTGCTCCAATGTATTaGCTGAGTAACTCTGGCCCCTTGACACTTATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: ISRTACSLAPMY*LSNSGPLTLIK Trigger: TTTTATAAGTGTCAAGGGGCCAGAGTTACTCAGCAAATACATTGGAGCAAGTGAACAAGCTGTTCGGGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 ENST00000496420.5 |
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| CDS TCA 72 bp | GTTGTTAAAACTAATTTTTCTCTGGTGGATATACTCTaGCGAGAGAGTCGAGAATGTATGGCTCGATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VVKTNFSLVDIL*RESRECMARST Trigger: TGTGGATCGAGCCATACATTCTCGACTCTCTCGTCAGAGTATATCCACCAGAGAAAAATTAGTTTTAACAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000438045.5 ENST00000484913.5 |
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| CDS CCA 72 bp | AAAGCTCGTAAAGCTTTACAGTCAACTCTCTCCACATaGGCATCCAGTTTGTCAAATGCTTCTTTACAGATT | + |
|
Preference number: 6 (lower is better) Translates to: KARKALQSTLST*ASSLSNASLQI Trigger: AATCTGTAAAGAAGCATTTGACAAACTGGATGCCCATGTGGAGAGAGTTGACTGTAAAGCTTTACGAGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428214.5 |
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| CDS CAA 90 bp | GGAAAGAGTGTAGCATTTGTTGGGTTTTGGACTCTAAATATGAAATaGTCACCTGATCAGGAGGAGGACAGTATACACATTTATCTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GKSVAFVGFWTLNMK*SPDQEEDSIHIYLV Trigger: GACTAGATAAATGTGTATACTGTCCTCCTCCTGATCAGGTGACAATTTCATATTTAGAGTCCAAAACCCAACAAATGCTACACTCTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496420.5 |
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| CDS TCA 72 bp | ACAGAGGTTGCTGACGCGTTATATATACTAGGAGGTTaGGATTTGCATACTCTGAAAATATTGTCTAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TEVADALYILGG*DLHTLKILSRG Trigger: TCCTCTAGACAATATTTTCAGAGTATGCAAATCTCAACCTCCTAGTATATATAACGCGTCAGCAACCTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000484913.5 |
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| CDS TCA 72 bp | ATGAATGGCACAGTGTTTATGAAAAACAGAGGTTGCTaGCGCGTTATATATACTAGGAGGTTGAGATTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: MNGTVFMKNRGC*RVIYTRRLRFA Trigger: TGCAAATCTCAACCTCCTAGTATATATAACGCGTCAGCAACCTCTGTTTTTCATAAACACTGTGCCATTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000484913.5 |
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| CDS CCA 72 bp | AAAGCTGGGCTCTACATCAAAATATTCCTGGTCCCATaGAAATACATGAATGGCACAGTGTTTATGAAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: KAGLYIKIFLVP*KYMNGTVFMKN Trigger: GTTTTTCATAAACACTGTGCCATTCATGTATTTCCATGGGACCAGGAATATTTTGATGTAGAGCCCAGCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000248633.9 ENST00000428214.5 ENST00000484913.5 |
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| CDS CAA 72 bp | GTAGCATTTGTTGGGTTTTGGACTCTAAATATGAAATaGTCACCTGATCAGGAGGAGGACAGTATACACATT | + |
|
Preference number: 6 (lower is better) Translates to: VAFVGFWTLNMK*SPDQEEDSIHI Trigger: AATGTGTATACTGTCCTCCTCCTGATCAGGTGACAATTTCATATTTAGAGTCCAAAACCCAACAAATGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496420.5 |
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| CDS CAA 90 bp | TTCCCAAGATGGAGAACTTCTACATTTTTGGTATATTTGATGGCATaGTTCAATTCTTCAAGTCCATTCCAGACTACTTGTAGCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: FPRWRTSTFLVYLMA*FNSSSPFQTTCSTQ Trigger: CTGTGTGCTACAAGTAGTCTGGAATGGACTTGAAGAATTGAACAATGCCATCAAATATACCAAAAATGTAGAAGTTCTCCATCTTGGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000422866.1 ENST00000428214.5 ENST00000484913.5 |
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| CDS TCA 72 bp | TGTTGGGTTTTGGACTCTAAATATGAAATTGTCACCTaGTCAGGAGGAGGACAGTATACACATTTATCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: CWVLDSKYEIVT*SGGGQYTHLSS Trigger: ACTAGATAAATGTGTATACTGTCCTCCTCCTGATCAGGTGACAATTTCATATTTAGAGTCCAAAACCCAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496420.5 |
||
| CDS TCA 72 bp | AACACAGGACAAGGAAGAGTTGAAAAATTATCTCTATaGAACCTGCTTACATGCTTACGATTCACATGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: NTGQGRVEKLSL*NLLTCLRFTCL Trigger: CAAGCATGTGAATCGTAAGCATGTAAGCAGGTTTCATAGAGATAATTTTTCAACTCTTCCTTGTCCTGTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000496420.5 |
||
| CDS CAA 90 bp | ATCCAGACTTTCCCAAGATGGAGAACTTCTACATTTTTGGTATATTaGATGGCATTGTTCAATTCTTCAAGTCCATTCCAGACTACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: IQTFPRWRTSTFLVY*MALFNSSSPFQTTC Trigger: ACAAGTAGTCTGGAATGGACTTGAAGAATTGAACAATGCCATCAAATATACCAAAAATGTAGAAGTTCTCCATCTTGGGAAAGTCTGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000422866.1 ENST00000428214.5 ENST00000484913.5 |
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| CDS CAA 72 bp | TGGAGAACTTCTACATTTTTGGTATATTTGATGGCATaGTTCAATTCTTCAAGTCCATTCCAGACTACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: WRTSTFLVYLMA*FNSSSPFQTTC Trigger: ACAAGTAGTCTGGAATGGACTTGAAGAATTGAACAATGCCATCAAATATACCAAAAATGTAGAAGTTCTCCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000248633.9 ENST00000422866.1 ENST00000428214.5 ENST00000484913.5 |
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