RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PERM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000187642

Ensembl transcript IDs: ENST00000341290.6, ENST00000433179.3, ENST00000479361.1

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTGCCCTaGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCCCGG +
Preference number: 1 (lower is better)
Translates to: RGVRGPGRGRHLVLP*APVVVSSSCISLAR
Trigger: CCGGGCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR TCA 90 bp CCCACAGGAGCCCCCGGGACAACCCCAGGAGCCCAGCCCTCCATCTaGGGCCACCGAATTCTCCCTCTGCACCTGCACCCAGGGCTCCCG +
Preference number: 1 (lower is better)
Translates to: PTGAPGTTPGAQPSI*GHRILPLHLHPGLP
Trigger: CGGGAGCCCTGGGTGCAGGTGCAGAGGGAGAATTCGGTGGCCTCAGATGGAGGGCTGGGCTCCTGGGGTTGTCCCGGGGGCTCCTGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR GCA 90 bp AGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTaGCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: RREGSEGPGEGGTSS*PGRLWSSPHPASPW
Trigger: CCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR GCA 90 bp GAGCCCAGCCCTCCATCTGAGGCCACCGAATTCTCCCTCTGCACCTaGACCCAGGGCTCCCGGGGAGGGGCTCGCGGCTCTGCCACAGAC +
Preference number: 1 (lower is better)
Translates to: EPSPPSEATEFSLCT*TQGSRGGARGSATD
Trigger: GTCTGTGGCAGAGCCGCGAGCCCCTCCCCGGGAGCCCTGGGTGCAGGTGCAGAGGGAGAATTCGGTGGCCTCAGATGGAGGGCTGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR CCA 90 bp GACTTTAGCACCTCCCTCCCAGGCGTGGGGAGTGGCCGTGGTCACTaGCTGGATCCTCAGGTGAGTCGGAGGGAGCAGCACCAGGACACG +
Preference number: 1 (lower is better)
Translates to: DFSTSLPGVGSGRGH*LDPQVSRREQHQDT
Trigger: CGTGTCCTGGTGCTGCTCCCTCCGACTCACCTGAGGATCCAGCCAGTGACCACGGCCACTCCCCACGCCTGGGAGGGAGGTGCTAAAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR TCA 90 bp CAGAGCCCGCAGAGGCCTTGGCCACAGTCCTTTGAGGATCAAGAGTaGTGGGCCTTGGAGCCCTTGCCAGCCCAGCCCACCTGTGAGGAG +
Preference number: 1 (lower is better)
Translates to: QSPQRPWPQSFEDQE*WALEPLPAQPTCEE
Trigger: CTCCTCACAGGTGGGCTGGGCTGGCAAGGGCTCCAAGGCCCATCACTCTTGATCCTCAAAGGACTGTGGCCAAGGCCTCTGCGGGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR CCA 90 bp AGAGGCCTTGGCCACAGTCCTTTGAGGATCAAGAGTGATGGGCCTTaGAGCCCTTGCCAGCCCAGCCCACCTGTGAGGAGGCTGCCCATC +
Preference number: 1 (lower is better)
Translates to: RGLGHSPLRIKSDGP*SPCQPSPPVRRLPI
Trigger: GATGGGCAGCCTCCTCACAGGTGGGCTGGGCTGGCAAGGGCTCCAAGGCCCATCACTCTTGATCCTCAAAGGACTGTGGCCAAGGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR GCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAGCAGCCCCCTTCCTCTaGCACCTCGGGCCCCTCACC +
Preference number: 2 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPAAPFL*HLGPLT
Trigger: GGTGAGGGGCCCGAGGTGGCAGAGGAAGGGGGCTGC...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCACCCAGGCGTGGGGAGTaGCCGTGGTCACTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPPRRGE*PWSLAG
Trigger: TCCAGCCAGTGACCACGGCCACTCCCCACGCCTGGG...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCACCTCCCTCCCAGGCGTaGGGAGTGGCCGTGGTCACT +
Preference number: 2 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPPPSQA*GVAVVT
Trigger: AGTGACCACGGCCACTCCCCACGCCTGGGAGGGAGG...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGCCTCCCTCCCAGGCGTaGGGAGTGGCCGTGGTCACT +
Preference number: 2 (lower is better)
Translates to: CPELQPECLAAQTPPRSKPPSQA*GVAVVT
Trigger: AGTGACCACGGCCACTCCCCACGCCTGGGAGGGAGG...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR TCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGGGCTGGATCCTCAGGTaGGTCGGAGGGAGCAGCACC +
Preference number: 2 (lower is better)
Translates to: CPELQPECLAAQTPPRSKGWILR*VGGSST
Trigger: GGTGCTGCTCCCTCCGACTCACCTGAGGATCCAGCC...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAGACTCCTCTTGGCTGTaGGTCCCCAGCTGCCCCACA +
Preference number: 2 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPDSSWL*VPSCPT
Trigger: TGTGGGGCAGCTGGGGACCCACAGCCAAGAGGAGTC...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAAGCCCGCAGAGGCCTTaGCCACAGTCCTTTGAGGAT +
Preference number: 2 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPSPQRP*PQSFED
Trigger: ATCCTCAAAGGACTGTGGCCAAGGCCTCTGCGGGCT...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCACACCTCGTCCTGCCCTaGGCGCCTGTGGTCGTCTCC +
Preference number: 2 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISHLVLP*APVVVS
Trigger: GGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTG...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR TCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGCTGTGTTCTCATCTGTaGATCTGGCCACCCTCCTAC +
Preference number: 2 (lower is better)
Translates to: CPELQPECLAAQTPPRSKLCSHL*IWPPSY
Trigger: GTAGGAGGGTGGCCAGATTCACAGATGAGAACACAG...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACCCAGGCGTGGGGAGTaGCCGTGGTCACTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKPRRGE*PWSLAG
Trigger: TCCAGCCAGTGACCACGGCCACTCCCCACGCCTGGG...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAATGCCCTGGGCGCCTGTaGTCGTCTCCTCATCCTGCA +
Preference number: 2 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKCPGRL*SSPHPA
Trigger: TGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCA...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTAGTGGCCGTGGTCACTaGCTGGATCCTCAGGTGAGT +
Preference number: 2 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLSGRGH*LDPQVS
Trigger: ACTCACCTGAGGATCCAGCCAGTGACCACGGCCACT...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR TCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTCTGTGTTCTCATCTGTaGATCTGGCCACCCTCCTAC +
Preference number: 2 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLLCSHL*IWPPSY
Trigger: GTAGGAGGGTGGCCAGATTCACAGATGAGAACACAG...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR GCA 72 bp GGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTaGCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCA +
Preference number: 3 (lower is better)
Translates to: GSEGPGEGGTSS*PGRLWSSPHPA
Trigger: TGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR CCA 72 bp AGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTGCCCTaGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCC +
Preference number: 3 (lower is better)
Translates to: RGPGRGRHLVLP*APVVVSSSCIS
Trigger: GGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCCCTCGCCCGGGCCCTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR GCA 72 bp CCCCTGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTaGTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: PLPLPRAPAGVS*CSDPSEVQVLS
Trigger: GGACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR GCA 72 bp CTGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTaGTCAGACCCCTCCGAGGTCCAAGTCCTGTCCTGC +
Preference number: 3 (lower is better)
Translates to: LPLPRAPAGVSC*SDPSEVQVLSC
Trigger: GCAGGACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CAA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCATCCAGCCGGAGTGTCTaGCTGCTCAGACCCCTCCGA +
Preference number: 3 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPSSRSV*LLRPLR
Trigger: TCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGA...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR GCA 72 bp CGAGGTCCAAGTCCTGTCCTGCCACTCAGCTCCCCCTaGACCCCAGAAGAAACGCAGGGTGCGGTTGCATTT +
Preference number: 3 (lower is better)
Translates to: RGPSPVLPLSSP*TPEETQGAVAF
Trigger: AAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGAGTGGCAGGACAGGACTTGGACCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CAA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGAAACGCAGGGTGCGGTaGCATTTGATTTCAGATAAA +
Preference number: 3 (lower is better)
Translates to: CPELQPECLAAQTPPRSKKRRVR*HLISDK
Trigger: TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTT...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CAA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGAGGGTGCGGTTGCATTaGATTTCAGATAAACAACAA +
Preference number: 3 (lower is better)
Translates to: CPELQPECLAAQTPPRSKRVRLH*ISDKQQ
Trigger: TTGTTGTTTATCTGAAATCAAATGCAACCGCACCCT...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR-3UTR CAA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAAGGGTGCGGTTGCATTaGATTTCAGATAAACAACAA +
Preference number: 3 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPRVRLH*ISDKQQ
Trigger: TTGTTGTTTATCTGAAATCAAATGCAACCGCACCCT...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTCTCCAGGGCCTGCAGTaGGAGCGGGACAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPLQGLQ*ERDSRP
Trigger: GGGCCGGCTGTCCCGCTCCCACTGCAGGCCCTGGAG...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTGGAGGCTCCAGGGCCTaGAGTGGGAGCGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPGGSRA*SGSGTA
Trigger: GGCTGTCCCGCTCCCACTGCAGGCCCTGGAGCCTCC...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCGGCCACTGGACGCCTaGCGGATCCTGACCGGCCGC +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASRPLDA*RILTGR
Trigger: GCGGCCGGTCAGGATCCGGCAGGCGTCCAGTGGCCG...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTGGCGGCACCTCGTCCTaGCCTGGGCGCCTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASGGTSS*PGRLWS
Trigger: CGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTTCGGCTGGGGCTCCGTaGTGGGGCTCCAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPSAGAP*WGSRAI
Trigger: GATAGCCCTGGAGCCCCACCACGGAGCCCCAGCCGA...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTAGGATCCGAGGCTGGTaGGGCCGGGGCCCGACAGCC +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASRIRGW*GRGPTA
Trigger: GGCTGTCGGGCCCCGGCCCCACCAGCCTCGGATCCT...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTTTGAGGATCCGAGGCTaGTGGGGCCGGGGCCCGACA +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPLRIRG*WGRGPT
Trigger: TGTCGGGCCCCGGCCCCACCAGCCTCGGATCCTCAA...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTCACCTCGTCCTGCCCTaGGCGCCTGTGGTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPHLVLP*APVVVS
Trigger: GGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTG...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTCGGACCAGGGCAGGATaGGAACTGGGAGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPRTRAG*ELGAPT
Trigger: GGTGGGAGCTCCCAGTTCTCATCCTGCCCTGGTCCG...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341290.6
CDS-3UTR TCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTCTCATCGGCGGTGGCTaGGAACTCGGCCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPLIGGG*ELGPVL
Trigger: CAGGACTGGGCCGAGTTCTCAGCCACCGCCGATGAG...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR GCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTGCAGCCCCCTTCCTCTaGCACCTCGGGCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASAAPFL*HLGPLT
Trigger: GGTGAGGGGCCCGAGGTGGCAGAGGAAGGGGGCTGC...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCTCACCAGGGGGCCGTaGGGCAGGGCCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASLTRGP*GRALQK
Trigger: CTTCTGCAGGGCCCTGCCCCACGGCCCCCTGGTGAG...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCGCTGGGGCTCCGTGGTaGGGCTCCAGGGCTATCGGG +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGAGAPW*GSRAIG
Trigger: CCCGATAGCCCTGGAGCCCCACCACGGAGCCCCAGC...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTGCCTCTTCTTTCGGCTaGGGCTCCGTGGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPASSFG*GSVVGL
Trigger: GAGCCCCACCACGGAGCCCCAGCCGAAAGAAGAGGC...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCTCCCTGGCCCGGGCCTaGCTCCTAGGAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGSLARA*LLGAGA
Trigger: AGCCCCAGCTCCTAGGAGCCAGGCCCGGGCCAGGGA...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCGGGGCCGAGGGACGGTaGAGCTTCTGCCCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGGAEGR*SFCPCG
Trigger: TCCGCACGGGCAGAAGCTCCACCGTCCCTCGGCCCC...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR TCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTGGCGAGGCAGGTGCTTaGGGATCCGAGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASGEAGA*GSEAGG
Trigger: CCCACCAGCCTCGGATCCTCAAGCACCTGCCTCGCC...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTAAGACAGGCTCACCCTaGGACCTGCTGACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPKTGSP*DLLTGC
Trigger: GCAGCCGGTCAGCAGGTCTCAGGGTGAGCCTGTCTT...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR GCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTGGCTGCGGCGCCCTTaGCCCACCTGCCGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKWLRRP*PTCRRK
Trigger: CTTCCGCCGGCAGGTGGGGCAAGGGCGCCGCAGCCA...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCTCGGCTGGGGCTCCGTaGTGGGGCTCCAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGSAGAP*WGSRAI
Trigger: GATAGCCCTGGAGCCCCACCACGGAGCCCCAGCCGA...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGGCCCAGCTCTGCGGGTaGGAGGCCAGGCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKAQLCG*EARRGQ
Trigger: CTGGCCTCGCCTGGCCTCCCACCCGCAGAGCTGGGC...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGAGGATCCGAGGCTGGTaGGGCCGGGGCCCGACAGCC +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKRIRGW*GRGPTA
Trigger: GGCTGTCGGGCCCCGGCCCCACCAGCCTCGGATCCT...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCCCCAGGCGTGGGGAGTaGCCGTGGTCACTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGPRRGE*PWSLAG
Trigger: TCCAGCCAGTGACCACGGCCACTCCCCACGCCTGGG...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCTCCCTCCCAGGCGTaGGGAGTGGCCGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASPPSQA*GVAVVT
Trigger: AGTGACCACGGCCACTCCCCACGCCTGGGAGGGAGG...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCCCTCCCTCCCAGGCGTaGGGAGTGGCCGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGPPSQA*GVAVVT
Trigger: AGTGACCACGGCCACTCCCCACGCCTGGGAGGGAGG...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTTGGGGTATGCGGATCTaGCGTCCTCACAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPWGMRI*RPHSPG
Trigger: ACCTGGGCTGTGAGGACGTCAGATCCGCATACCCCA...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCGGCTGGATCCTCAGGTaGGTCGGAGGGAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGGWILR*VGGSST
Trigger: GGTGCTGCTCCCTCCGACTCACCTGAGGATCCAGCC...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCACCCTGAGACCTGCTaGCCGGCTGCTGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASHPETC*PAAVWP
Trigger: TGGCCACACAGCAGCCGGTCAGCAGGTCTCAGGGTG...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR GCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTGGATGGCAGAGATGGTaGCGACGTTGGCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPGWQRW*RRWPAR
Trigger: CCTTGCTGGCCAACGTCGGCACCATCTCTGCCATCC...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTCCACTCAGCTCCCCCTaGACCCCAGAAGAAACGCAG +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPPLSSP*TPEETQ
Trigger: CTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGAGTGG...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCTTCTCCCTCTGCACCTaGACCCAGGGCTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGFSLCT*TQGSRG
Trigger: TCCCCGGGAGCCCTGGGTGCAGGTGCAGAGGGAGAA...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGGCTCCATCCATGCCCTaGGTCCCGGCGGCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKAPSMP*VPAAEL
Trigger: CAGCTCGGCCGCCGGGACCCAGGGCATGGATGGAGC...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341290.6
CDS-3UTR CCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTAGCGGGGAGCCCGTCTaGGCAGAAGCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASSGEPV*AEAEAP
Trigger: AGGAGCCTCTGCTTCTGCCCAGACGGGCTCCCCGCT...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTGCCCAAACCTGGCCCTaGTCTGTCTTCCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPAQTWP*SVFLHR
Trigger: CCTGTGCAGGAAGACAGACCAGGGCCAGGTTTGGGC...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTCCTCAGGGATGGAGATaGGCACGGGGTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPPQGWR*ARGLQV
Trigger: TACCTGGAGACCCCGTGCCCATCTCCATCCCTGAGG...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTCGTCTAAGAGCCAGGTaGAGCCGCTCTACCACGGCT +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPRLRAR*SRSTTA
Trigger: AGCCGTGGTAGAGCGGCTCCACCTGGCTCTTAGACG...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCATCCCTGGCCCGGGCCTaGCTCCTAGGAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPSLARA*LLGAGA
Trigger: AGCCCCAGCTCCTAGGAGCCAGGCCCGGGCCAGGGA...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTCACACTCATCGGCGGTaGCTGAGAACTCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPHTHRR*LRTRPS
Trigger: ACTGGGCCGAGTTCTCAGCCACCGCCGATGAGTGTG...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR TCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCATCCTGGGGACTTGGGTaGGACCCAGTGCGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPSWGLG*DPVRVP
Trigger: GGGCACCCGCACTGGGTCTCACCCAAGTCCCCAGGA...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAGGCGAGGCAGGTGCTTaGGGATCCGAGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPGEAGA*GSEAGG
Trigger: CCCACCAGCCTCGGATCCTCAAGCACCTGCCTCGCC...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGGTGCTGGGTGTCTGCTaGCCGGTCCCCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKVLGVC*PVPRAK
Trigger: CTTGGCCCTGGGGACCGGTCAGCAGACACCCAGCAC...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR GCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCTGGTCTGTCTTCCTaGACAGGGGACCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASPGLSS*TGDLGP
Trigger: TGGCCCCAGGTCCCCTGTGCAGGAAGACAGACCAGG...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTCTTAGCCACTGGGCCTaGTGTAGGCAAGGCCACATC +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPLSHWA*CRQGHI
Trigger: GATGTGGCCTTGCCTACAGCAGGCCCAGTGGCTAAG...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAGGACGGTGGAGCTTCTaGCCGTGCGGACGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPGRWSF*PCGRAG
Trigger: CCCAGCACGTCCGCACGGGCAGAAGCTCCACCGTCC...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCCTGGCTTATTGGGGCTaGGCCCAGCCACGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGLAYWG*AQPRRS
Trigger: GCTTCTCCGTGGCTGGGCCCAGCCCCAATAAGCCAG...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTAGTGGCCGTGGTCACTaGCTGGATCCTCAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPSGRGH*LDPQVS
Trigger: ACTCACCTGAGGATCCAGCCAGTGACCACGGCCACT...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGCCCAGGCGTGGGGAGTaGCCGTGGTCACTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKPRRGE*PWSLAG
Trigger: TCCAGCCAGTGACCACGGCCACTCCCCACGCCTGGG...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTGACTCCTCTTGGCTGTaGGTCCCCAGCTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASDSSWL*VPSCPT
Trigger: TGTGGGGCAGCTGGGGACCCACAGCCAAGAGGAGTC...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCTCGGCGCGGGGTTCTaGTTTGGTCTGTGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASLGAGF*FGLCLA
Trigger: AGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAG...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTAGAGCCACACTGGACTaGGGCTCAGAAGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPRATLD*GSEAGV
Trigger: TACACCAGCTTCTGAGCCTCAGTCCAGTGTGGCTCT...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCTGCCCATCCCCTCTTTaGGGCCACCCTGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGCPSPL*GHPVSS
Trigger: AGAGGACACAGGGTGGCCTCAAAGAGGGGATGGGCA...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAGTCGTGGACACTGTGTaGAGCTTGGCTCGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPVVDTV*SLARRG
Trigger: CCCGCGCCGAGCCAAGCTGCACACAGTGTCCACGAC...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAGGGCAGGATGAGAACTaGGAGCTCCCACCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPGQDEN*ELPPPR
Trigger: CCGAGGCGGTGGGAGCTCCCAGTTCTCATCCTGCCC...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341290.6
CDS-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCACGGGGTCTCCAGGTATaGGGGCCGGCACAGGATCAG +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPRGLQV*GPAQDQ
Trigger: CTGATCCTGTGCCGGCCCCCATACCTGGAGACCCCG...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTAGATGGTGCCGACGTTaGCCAGCAAGGCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPRWCRR*PARLFS
Trigger: GGAAAACAGCCTTGCTGGCCAACGTCGGCACCATCT...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTAGCGGATGGCAGAGATaGTGCCGACGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASSGWQR*CRRWPA
Trigger: TGCTGGCCAACGTCGGCACCATCTCTGCCATCCGCT...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCAGCGGATGGCAGAGATaGTGCCGACGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGSGWQR*CRRWPA
Trigger: TGCTGGCCAACGTCGGCACCATCTCTGCCATCCGCT...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCACTGGCTGAAGGCAAATaGTGGGACAGGCCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPLAEGK*WDRPPE
Trigger: CTCCGGGGGCCTGTCCCATCATTTGCCTTCAGCCAG...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTTTTGAGGATCAAGAGTaGTGGGCCTTGGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPFEDQE*WALEPL
Trigger: CAAGGGCTCCAAGGCCCATCACTCTTGATCCTCAAA...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTACAGCCGTGTCAGATTaGGGCTTGGAGGCAGGTATA +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPTAVSD*GLEAGI
Trigger: TATACCTGCCTCCAAGCCGCAATCTGACACGGCTGT...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAATCCTGACCGGCCGCTaGCGCCTCAGCCTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPILTGR*RLSLFV
Trigger: AACGAAGAGGCTGAGGCGGCAGCGGCCGGTCAGGAT...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCCAGGCGTCTGGGGTATaGGGATCTGACGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGQASGV*GSDVLT
Trigger: TGTGAGGACGTCAGATCCGCATACCCCAGACGCCTG...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAGCCGGAGTGTCTTGCTaGTCAGACCCCTCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPAGVSC*SDPSEV
Trigger: GACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGC...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCACCAGCCGGAGTGTCTTaGTGCTCAGACCCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPPAGVS*CSDPSE
Trigger: CTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGG...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCGGGGACTGCTGCCACTaGTGTCCCCTTGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGGDCCH*CPLGQC
Trigger: ACATTGACCAAGGGGACAGCAGTGGCAGCAGTCCCC...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCAGACAGGCCCAAACCTaGCCCTGGTCTGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGRQAQT*PWSVFL
Trigger: CAGGAAGACAGACCAGGGCCAGGTTTGGGCCTGTCT...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCCATAGACCTCAGGGATaGAGATGGGCACGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGHRPQG*RWARGL
Trigger: GAGACCCCGTGCCCATCTCCATCCCTGAGGTCTATG...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTAGCCCGCAGAGGCCTTaGCCACAGTCCTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASSPQRP*PQSFED
Trigger: ATCCTCAAAGGACTGTGGCCAAGGCCTCTGCGGGCT...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGGACTCCTCTTGGCTGTaGGTCCCCAGCTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKDSSWL*VPSCPT
Trigger: TGTGGGGCAGCTGGGGACCCACAGCCAAGAGGAGTC...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGACGGCCACTGGACGCCTaGCGGATCCTGACCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRRPLDA*RILTGR
Trigger: GCGGCCGGTCAGGATCCGGCAGGCGTCCAGTGGCCG...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGGGATGGCAGAGATGGTaGCGACGTTGGCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKGWQRW*RRWPAR
Trigger: CCTTGCTGGCCAACGTCGGCACCATCTCTGCCATCC...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAGTCCAAGTCCTGTCCTaGCACTCAGCTCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPVQVLS*HSAPPA
Trigger: TGCAGGGGGAGCTGAGTGGCAGGACAGGACTTGGAC...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCACCTCCTGCCCGGCTTTaGCCATCAGCTTTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPPPARL*PSALPS
Trigger: AGACGGCAAAGCTGATGGCCAAAGCCGGGCAGGAGG...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGGCCCAAACCTGGCCCTaGTCTGTCTTCCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKAQTWP*SVFLHR
Trigger: CCTGTGCAGGAAGACAGACCAGGGCCAGGTTTGGGC...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCCTTCCCAGACAGTCGTaGACACTGTGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGLPRQS*TLCAAW
Trigger: CCAAGCTGCACACAGTGTCCACGACTGTCTGGGAAG...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGCCTCAGGGATGGAGATaGGCACGGGGTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKPQGWR*ARGLQV
Trigger: TACCTGGAGACCCCGTGCCCATCTCCATCCCTGAGG...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCACGTCTAAGAGCCAGGTaGAGCCGCTCTACCACGGCT +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPRLRAR*SRSTTA
Trigger: AGCCGTGGTAGAGCGGCTCCACCTGGCTCTTAGACG...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAGGCGGAAGTAGCGGATaGCAGAGATGGTGCCGACGT +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPGGSSG*QRWCRR
Trigger: ACGTCGGCACCATCTCTGCCATCCGCTACTTCCGCC...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGAGGGTCACGGCAAAGCTaGTCCCGGGCCCGACCCTCG +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRGSRQS*SRARPS
Trigger: CGAGGGTCGGGCCCGGGAGCAGCTTTGCCGTGACCC...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGGAGGCTCCAGGGCCTaGAGTGGGAGCGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISGGSRA*SGSGTA
Trigger: GGCTGTCCCGCTCCCACTGCAGGCCCTGGAGCCTCC...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGCAGGCGTCTGGGGTATaGGGATCTGACGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKQASGV*GSDVLT
Trigger: TGTGAGGACGTCAGATCCGCATACCCCAGACGCCTG...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGCAGCCCCCTTCCTCTaGCACCTCGGGCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISAAPFL*HLGPLT
Trigger: GGTGAGGGGCCCGAGGTGGCAGAGGAAGGGGGCTGC...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGAGCCCCAGTTGCTGTCTaGGGGGCTGAGGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRAPVAV*GAEGRA
Trigger: AGCCCGGCCCTCAGCCCCCCAGACAGCAACTGGGGC...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCTGGGCTCCAACGTCTaGGAAGAAGAACTCGCACAT +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASLGSNV*EEELAH
Trigger: ATGTGCGAGTTCTTCTTCCCAGACGTTGGAGCCCAG...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAGGCGGCACCTCGTCCTaGCCTGGGCGCCTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKGGTSS*PGRLWS
Trigger: CGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCACTTCCCAGACAGTCGTaGACACTGTGTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPLPRQS*TLCAAW
Trigger: CCAAGCTGCACACAGTGTCCACGACTGTCTGGGAAG...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGCATCCAGGCCATGTTTaGAGGCAGGTGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKHPGHV*RQVWTQ
Trigger: CTGTGTCCACACCTGCCTCCAAACATGGCCTGGATG...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCACATCCAGGCCATGTTTaGAGGCAGGTGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPHPGHV*RQVWTQ
Trigger: CTGTGTCCACACCTGCCTCCAAACATGGCCTGGATG...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAGCCCAGCTCTGCGGGTaGGAGGCCAGGCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKAQLCG*EARRGQ
Trigger: CTGGCCTCGCCTGGCCTCCCACCCGCAGAGCTGGGC...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACTCCAGGGCCTGCAGTaGGAGCGGGACAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKLQGLQ*ERDSRP
Trigger: GGGCCGGCTGTCCCGCTCCCACTGCAGGCCCTGGAG...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAAGGATGAGAACTGGCTaGGAGGGCTGGCGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISRMRTG*EGWRRG
Trigger: GCCCCGGCGCCAGCCCTCCCAGCCAGTTCTCATCCT...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR TCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCACATGTCATTCTGGCTaGAGGCAAATGATGGGACAG +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGTCHSG*RQMMGQ
Trigger: CTGTCCCATCATTTGCCTTCAGCCAGAATGACATGT...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTGGGTGCGGTTGCATTTaGTTTCAGATAAACAACAAC +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPGCGCI*FQINNN
Trigger: GTTGTTGTTTATCTGAAATCAAATGCAACCGCACCC...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGGCCCCAACTCCTCCTaGCCGGCTTTGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISGPNSS*PALAIS
Trigger: GCTGATGGCCAAAGCCGGGCAGGAGGAGTTGGGGCC...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGACAGCCGTGTCAGATTaGGGCTTGGAGGCAGGTATA +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKTAVSD*GLEAGI
Trigger: TATACCTGCCTCCAAGCCGCAATCTGACACGGCTGT...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCATTCTCCCTCTGCACCTaGACCCAGGGCTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISFSLCT*TQGSRG
Trigger: TCCCCGGGAGCCCTGGGTGCAGGTGCAGAGGGAGAA...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGAGACCTGCTGACCGGCTaGTGTGTGGCCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRDLLTG*CVATSS
Trigger: GGAGGACGTGGCCACACAGCAGCCGGTCAGCAGGTC...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR CCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCATGTGGCCAGGGGACTTaGGACTCCCAGGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISCGQGT*DSQGAH
Trigger: GTGAGCCCCCTGGGAGTCCCAAGTCCCCTGGCCACA...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGAGCCTCTTCTTTCGGCTaGGGCTCCGTGGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRASSFG*GSVVGL
Trigger: GAGCCCCACCACGGAGCCCCAGCCGAAAGAAGAGGC...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAGCCCCAGTTGCTGTCTaGGGGGCTGAGGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKAPVAV*GAEGRA
Trigger: AGCCCGGCCCTCAGCCCCCCAGACAGCAACTGGGGC...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCACGCCGCCTCGACCTCTaGGCTCCAACGTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISRRLDL*APTSGK
Trigger: CTTCCCAGACGTTGGAGCCCAGAGGTCGAGGCGGCG...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCACGGGGTCTCCAGGTATaGGGGCCGGCACAGGATCAG +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISRGLQV*GPAQDQ
Trigger: CTGATCCTGTGCCGGCCCCCATACCTGGAGACCCCG...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCTCCTGGTCACTCAGCTaGACGCTGTACTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: PRPALGACGRLLILHLPGSWSLS*TLYWKF
Trigger: AAATTTCCAGTACAGCGTCCAGCTGAGTGACCAGGA...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR TCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCACTGGCTGAAGGCAAATaGTGGGACAGGCCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISLAEGK*WDRPPE
Trigger: CTCCGGGGGCCTGTCCCATCATTTGCCTTCAGCCAG...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATTGGGTGAGACCCAGTaGGGGTGCCCCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRLGETQ*GCPRAA
Trigger: TGCTGCTCTGGGGCACCCGCACTGGGTCTCACCCAA...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGAATCCTGACCGGCCGCTaGCGCCTCAGCCTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRILTGR*RLSLFV
Trigger: AACGAAGAGGCTGAGGCGGCAGCGGCCGGTCAGGAT...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCACCAGCCGGAGTGTCTTaGTGCTCAGACCCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISPAGVS*CSDPSE
Trigger: CTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGG...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGGTCCGTGTCCAATTGTaGCTTGGAGATGGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKVRVQL*LGDGCR
Trigger: TCTACACCCATCTCCAAGCCACAATTGGACACGGAC...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGACTGGCTTATTGGGGCTaGGCCCAGCCACGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRLAYWG*AQPRRS
Trigger: GCTTCTCCGTGGCTGGGCCCAGCCCCAATAAGCCAG...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCTTCGTTCTCCTCGATaGTGTCACAGAAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASLRSPR*CHRRRT
Trigger: AGTTCTTCTTCTGTGACACCATCGAGGAGAACGAAG...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTCACAGCCCAGGTaGCAAAAGCTACAAACACCA +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKSSQPR*QKLQTP
Trigger: TGGTGTTTGTAGCTTTTGCCACCTGGGCTGTGAGGA...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATGCCCTGGGCGCCTGTaGTCGTCTCCTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRCPGRL*SSPHPA
Trigger: TGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCA...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAGGGCAGGATGAGAACTaGCTGGGAGGGCTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKGQDEN*LGGLAP
Trigger: CGGCGCCAGCCCTCCCAGCCAGTTCTCATCCTGCCC...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAGGCCCCAACTCCTCCTaGCCGGCTTTGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKGPNSS*PALAIS
Trigger: GCTGATGGCCAAAGCCGGGCAGGAGGAGTTGGGGCC...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGACCACTCAGCTCCCCCTaGACCCCAGAAGAAACGCAG +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRPLSSP*TPEETQ
Trigger: CTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGAGTGG...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGTCCAAGTCCTGTCCTaGCACTCAGCTCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISVQVLS*HSAPPA
Trigger: TGCAGGGGGAGCTGAGTGGCAGGACAGGACTTGGAC...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCACCTCCTGCCCGGCTTTaGCCATCAGCTTTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISPPARL*PSALPS
Trigger: AGACGGCAAAGCTGATGGCCAAAGCCGGGCAGGAGG...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACGCCGCCTCGACCTCTaGGCTCCAACGTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKRRLDL*APTSGK
Trigger: CTTCCCAGACGTTGGAGCCCAGAGGTCGAGGCGGCG...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGAGGCACATGTCATTCTaGCTGAAGGCAAATGATGGG +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKRHMSF*LKANDG
Trigger: CCCATCATTTGCCTTCAGCCAGAATGACATGTGCCT...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTTCGGGGCTCCATCCATaGCCTGGGTCCCGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLSGLHP*PGSRRP
Trigger: CGGCCGCCGGGACCCAGGGCATGGATGGAGCCCCGA...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341290.6
CDS-3UTR GCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCACTTAGCCACTGGGCCTaGTGTAGGCAAGGCCACATC +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISLSHWA*CRQGHI
Trigger: GATGTGGCCTTGCCTACAGCAGGCCCAGTGGCTAAG...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAATTGGGTGAGACCCAGTaGGGGTGCCCCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKLGETQ*GCPRAA
Trigger: TGCTGCTCTGGGGCACCCGCACTGGGTCTCACCCAA...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTTGGCTGCGGCGCCCTTaGCCCACCTGCCGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLWLRRP*PTCRRK
Trigger: CTTCCGCCGGCAGGTGGGGCAAGGGCGCCGCAGCCA...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAGCCGGAGTGTCTTGCTaGTCAGACCCCTCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKAGVSC*SDPSEV
Trigger: GACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGC...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTATAGAATTTTATTGGTaGTGCATCCATGTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: DAVEERGQRARARAAPRPIEFYW*CIHVFS
Trigger: AGAGAACACATGGATGCAGCACCAATAAAATTCTAT...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATTCTTCCTGGGGACTTaGGTGAGACCCAGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRFFLGT*VRPSAG
Trigger: ACCCGCACTGGGTCTCACCCAAGTCCCCAGGAAGAA...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGACATAGACCTCAGGGATaGAGATGGGCACGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRHRPQG*RWARGL
Trigger: GAGACCCCGTGCCCATCTCCATCCCTGAGGTCTATG...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGAAGTGGCCGTGGTCACTaGCTGGATCCTCAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRSGRGH*LDPQVS
Trigger: ACTCACCTGAGGATCCAGCCAGTGACCACGGCCACT...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGAAGCCCGCAGAGGCCTTaGCCACAGTCCTTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRSPQRP*PQSFED
Trigger: ATCCTCAAAGGACTGTGGCCAAGGCCTCTGCGGGCT...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACTCGGCGCGGGGTTCTaGTTTGGTCTGTGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKLGAGF*FGLCLA
Trigger: AGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAG...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAAGAGCCACACTGGACTaGGGCTCAGAAGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISRATLD*GSEAGV
Trigger: TACACCAGCTTCTGAGCCTCAGTCCAGTGTGGCTCT...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGACCCTGCAGAAGCCTCTaGATCTGGTCTCCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRPCRSL*IWSPED
Trigger: GTCTTCTGGAGACCAGATGCAGAGGCTTCTGCAGGG...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGCTGAAATTAACCGAATaGCCTGTGTTCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: CPELQPECLAAQTPPRSKLKLTE*PVFSSV
Trigger: CACAGATGAGAACACAGGGCATTCGGTTAATTTCAG...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAACCGAATTCTCCCTCTaGACCTGCACCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKTEFSL*TCTQGS
Trigger: GGAGCCCTGGGTGCAGGTGCAGAGGGAGAATTCGGT...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGACATCCATGTGTTCTCTaGTCAGCAGCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRHPCVL*SAARVS
Trigger: GGAGACCCTGGCTGCTGAGCAGAGAACACATGGATG...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAAGAAGCCTCTGCATCTaGTCTCCAGAAGACGCCGGA +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISRSLCI*SPEDAG
Trigger: TCCGGCGTCTTCTGGAGACCAGATGCAGAGGCTTCT...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGAAGAAGCCTCTGCATCTaGTCTCCAGAAGACGCCGGA +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRRSLCI*SPEDAG
Trigger: TCCGGCGTCTTCTGGAGACCAGATGCAGAGGCTTCT...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCACGCGGGGTTCTGATTTaGTCTGTGCCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISRGVLI*SVPCSV
Trigger: GACAGAGCAAGGCACAGACCAAATCAGAACCCCGCG...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTTCCTGGGGACTTGGGTaGGACCCAGTGCGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLSWGLG*DPVRVP
Trigger: GGGCACCCGCACTGGGTCTCACCCAAGTCCCCAGGA...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGACTGTGTTCTCATCTGTaGATCTGGCCACCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRLCSHL*IWPPSY
Trigger: GTAGGAGGGTGGCCAGATTCACAGATGAGAACACAG...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATTTGAGGATCAAGAGTaGTGGGCCTTGGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRFEDQE*WALEPL
Trigger: CAAGGGCTCCAAGGCCCATCACTCTTGATCCTCAAA...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTCTGCCCGTGCGGACGTaGTGGGTGTCTGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLLPVRT*WVSADR
Trigger: CCGGTCAGCAGACACCCAGCACGTCCGCACGGGCAG...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAAGACAGGCCCAAACCTaGCCCTGGTCTGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKRQAQT*PWSVFL
Trigger: CAGGAAGACAGACCAGGGCCAGGTTTGGGCCTGTCT...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAATTCTTCCTGGGGACTTaGGTGAGACCCAGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKFFLGT*VRPSAG
Trigger: ACCCGCACTGGGTCTCACCCAAGTCCCCAGGAAGAA...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTTTGAGGATCCGAGGCTaGTGGGGCCGGGGCCCGACA +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLLRIRG*WGRGPT
Trigger: TGTCGGGCCCCGGCCCCACCAGCCTCGGATCCTCAA...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCACTTGGTCAATGTCACTaGACAAGAGCTCGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISLGQCH*TRARPQ
Trigger: CTGGGGACGAGCTCTTGTCCAGTGACATTGACCAAG...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTCCCGTGCGGACGTGCTaGGTGTCTGCTGACCGGTCC +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLPVRTC*VSADRS
Trigger: GGACCGGTCAGCAGACACCCAGCACGTCCGCACGGG...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACCCTGCAGAAGCCTCTaGATCTGGTCTCCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKPCRSL*IWSPED
Trigger: GTCTTCTGGAGACCAGATGCAGAGGCTTCTGCAGGG...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAATTTGGTCTGTGCCTTaGTCTGTCACAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISIWSVP*SVTGTG
Trigger: ACCTGTCCCTGTGACAGAGCAAGGCACAGACCAAAT...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTTGTGGCCAGGGGACTTaGGACTCCCAGGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLCGQGT*DSQGAH
Trigger: GTGAGCCCCCTGGGAGTCCCAAGTCCCCTGGCCACA...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTAGCGGGGAGCCCGTCTaGGCAGAAGCAGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLSGEPV*AEAEAP
Trigger: AGGAGCCTCTGCTTCTGCCCAGACGGGCTCCCCGCT...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACGCGGGGTTCTGATTTaGTCTGTGCCTTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKRGVLI*SVPCSV
Trigger: GACAGAGCAAGGCACAGACCAAATCAGAACCCCGCG...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCATCCTCACAGCCCAGGTaGCAAAAGCTACAAACACCA +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISSSQPR*QKLQTP
Trigger: TGGTGTTTGTAGCTTTTGCCACCTGGGCTGTGAGGA...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAAGATGGTGCCGACGTTaGCCAGCAAGGCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKRWCRR*PARLFS
Trigger: GGAAAACAGCCTTGCTGGCCAACGTCGGCACCATCT...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAACATGTCATTCTGGCTaGAGGCAAATGATGGGACAG +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISTCHSG*RQMMGQ
Trigger: CTGTCCCATCATTTGCCTTCAGCCAGAATGACATGT...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTCCTGGTCTGTCTTCCTaGACAGGGGACCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLPGLSS*TGDLGP
Trigger: TGGCCCCAGGTCCCCTGTGCAGGAAGACAGACCAGG...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTTGGAGCTTCTGCCCGTaGGGACGTGCTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLWSFCP*GRAGCL
Trigger: CAGACACCCAGCACGTCCGCACGGGCAGAAGCTCCA...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACCACTGCTGTCCCCTTaGTCAATGTCACTGGACAAG +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKPLLSP*SMSLDK
Trigger: CTTGTCCAGTGACATTGACCAAGGGGACAGCAGTGG...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR TCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTTGCCCATCCCCTCTTTaGGGCCACCCTGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLCPSPL*GHPVSS
Trigger: AGAGGACACAGGGTGGCCTCAAAGAGGGGATGGGCA...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAATTTGGTCTGTGCCTTaGTCTGTCACAGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKIWSVP*SVTGTG
Trigger: ACCTGTCCCTGTGACAGAGCAAGGCACAGACCAAAT...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTACCGAATTCTCCCTCTaGACCTGCACCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLTEFSL*TCTQGS
Trigger: GGAGCCCTGGGTGCAGGTGCAGAGGGAGAATTCGGT...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGACTTCGTTCTCCTCGATaGTGTCACAGAAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRLRSPR*CHRRRT
Trigger: AGTTCTTCTTCTGTGACACCATCGAGGAGAACGAAG...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTCATCCATGTGTTCTCTaGTCAGCAGCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLHPCVL*SAARVS
Trigger: GGAGACCCTGGCTGCTGAGCAGAGAACACATGGATG...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR CAA 72 bp GCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTaGCATTTGATTTCAGATAAACAACAACTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: APPAPQKKRRVR*HLISDKQQLLS
Trigger: ACTAAGAAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR TCA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAGGGTGCGGTTGCATTTaGTTTCAGATAAACAACAAC +
Preference number: 4 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKGCGCI*FQINNN
Trigger: GTTGTTGTTTATCTGAAATCAAATGCAACCGCACCC...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR GCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAATAGAATTTTATTGGTaGTGCATCCATGTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISIEFYW*CIHVFS
Trigger: AGAGAACACATGGATGCAGCACCAATAAAATTCTAT...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTGTCCGTGTCCAATTGTaGCTTGGAGATGGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLVRVQL*LGDGCR
Trigger: TCTACACCCATCTCCAAGCCACAATTGGACACGGAC...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAAAGATAGAATTTTATTaGTGCTGCATCCATGTGTTC +
Preference number: 4 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISKIEFY*CCIHVF
Trigger: GAACACATGGATGCAGCACCAATAAAATTCTATCTT...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGAAAGATAGAATTTTATTaGTGCTGCATCCATGTGTTC +
Preference number: 4 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRKIEFY*CCIHVF
Trigger: GAACACATGGATGCAGCACCAATAAAATTCTATCTT...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CCA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTAGGCACATGTCATTCTaGCTGAAGGCAAATGATGGG +
Preference number: 4 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLRHMSF*LKANDG
Trigger: CCCATCATTTGCCTTCAGCCAGAATGACATGTGCCT...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
3UTR CAA 72 bp CCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTaGATTTCAGATAAACAACAACTTCTTAGTAAAATG +
Preference number: 4 (lower is better)
Translates to: PAPQKKRRVRLH*ISDKQQLLSKM
Trigger: CATTTTACTAAGAAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 90 bp CTGGCTGGGAGGGCTGGCGCCGGGGCCGAGGGACGGTGGAGCTTCTaGCCGTGCGGACGTGCTGGGTGTCTGCTGACCGGTCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LAGRAGAGAEGRWSF*PCGRAGCLLTGPQG
Trigger: GCCCTGGGGACCGGTCAGCAGACACCCAGCACGTCCGCACGGGCAGAAGCTCCACCGTCCCTCGGCCCCGGCGCCAGCCCTCCCAGCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS GCA 90 bp GGGAGGGCTGGCGCCGGGGCCGAGGGACGGTGGAGCTTCTGCCCGTaGGGACGTGCTGGGTGTCTGCTGACCGGTCCCCAGGGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: GRAGAGAEGRWSFCP*GRAGCLLTGPQGQD
Trigger: GTCTTGGCCCTGGGGACCGGTCAGCAGACACCCAGCACGTCCGCACGGGCAGAAGCTCCACCGTCCCTCGGCCCCGGCGCCAGCCCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS GCA 90 bp CGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTaGATCTCCCTGGCCCGGGCCTGGCTCCTAGGAGCTGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RHLVLPWAPVVVSSS*ISLARAWLLGAGAG
Trigger: CCCAGCCCCAGCTCCTAGGAGCCAGGCCCGGGCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341290.6
ENST00000433179.3
ENST00000479361.1
CDS GCA 90 bp TGGCGCCGGGGCCGAGGGACGGTGGAGCTTCTGCCCGTGCGGACGTaGTGGGTGTCTGCTGACCGGTCCCCAGGGCCAAGACAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: WRRGRGTVELLPVRT*WVSADRSPGPRQAH
Trigger: GTGAGCCTGTCTTGGCCCTGGGGACCGGTCAGCAGACACCCAGCACGTCCGCACGGGCAGAAGCTCCACCGTCCCTCGGCCCCGGCGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS CCA 90 bp CGCCGGGGCCGAGGGACGGTGGAGCTTCTGCCCGTGCGGACGTGCTaGGTGTCTGCTGACCGGTCCCCAGGGCCAAGACAGGCTCACCCT +
Preference number: 5 (lower is better)
Translates to: RRGRGTVELLPVRTC*VSADRSPGPRQAHP
Trigger: AGGGTGAGCCTGTCTTGGCCCTGGGGACCGGTCAGCAGACACCCAGCACGTCCGCACGGGCAGAAGCTCCACCGTCCCTCGGCCCCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS CCA 90 bp TCTGGTCTCCAGAAGACGCCGGACCAGGGCAGGATGAGAACTGGCTaGGAGGGCTGGCGCCGGGGCCGAGGGACGGTGGAGCTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: SGLQKTPDQGRMRTG*EGWRRGRGTVELLP
Trigger: GGGCAGAAGCTCCACCGTCCCTCGGCCCCGGCGCCAGCCCTCCCAGCCAGTTCTCATCCTGCCCTGGTCCGGCGTCTTCTGGAGACCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS GCA 90 bp GCTCAGACACAACCGCCTCCATCTCCACCACATCAGGCCCAGCTCTaGGGGTGGGAGGCCAGGCGAGGCCAGCGGCGTCGGCTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: AQTQPPPSPPHQAQL*GWEARRGQRRRLWE
Trigger: TTCCCAGAGCCGACGCCGCTGGCCTCGCCTGGCCTCCCACCCGCAGAGCTGGGCCTGATGTGGTGGAGATGGAGGCGGTTGTGTCTGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CCA 90 bp CCCCAGAGGCCAGGCCGGCCTGCAGGAGGCCACACTCATCGGCGGTaGCTGAGAACTCGGCCCAGTCCTGGTCACTCAGCTGGACGCTGT +
Preference number: 5 (lower is better)
Translates to: PQRPGRPAGGHTHRR*LRTRPSPGHSAGRC
Trigger: ACAGCGTCCAGCTGAGTGACCAGGACTGGGCCGAGTTCTCAGCCACCGCCGATGAGTGTGGCCTCCTGCAGGCCGGCCTGGCCTCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR CAA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTTCCTCCTGCCCGGCTTaGGCCATCAGCTTTGCCGTC +
Preference number: 5 (lower is better)
Translates to: DAVEERGQRARARAAPRPSSCPA*AISFAV
Trigger: GACGGCAAAGCTGATGGCCAAAGCCGGGCAGGAGGA...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CCA 90 bp GGCGCCCTTGCCCCACCTGCCGGCGGAAGTAGCGGATGGCAGAGATaGTGCCGACGTTGGCCAGCAAGGCTGTTTTCCAGGCGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: GALAPPAGGSSGWQR*CRRWPARLFSRRLG
Trigger: CCCCAGACGCCTGGAAAACAGCCTTGCTGGCCAACGTCGGCACCATCTCTGCCATCCGCTACTTCCGCCGGCAGGTGGGGCAAGGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341290.6
ENST00000433179.3
ENST00000479361.1
CDS CCA 90 bp TGCATCTGGTCTCCAGAAGACGCCGGACCAGGGCAGGATGAGAACTaGCTGGGAGGGCTGGCGCCGGGGCCGAGGGACGGTGGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: CIWSPEDAGPGQDEN*LGGLAPGPRDGGAS
Trigger: AGAAGCTCCACCGTCCCTCGGCCCCGGCGCCAGCCCTCCCAGCCAGTTCTCATCCTGCCCTGGTCCGGCGTCTTCTGGAGACCAGATGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS-3UTR CAA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCGACACTGTGTGCAGCTaGGCTCGGCGCGGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: PRPALGACGRLLILHLPGDTVCS*ARRGVL
Trigger: CAGAACCCCGCGCCGAGCCAAGCTGCACACAGTGTC...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTGACACTGTGTGCAGCTaGGCTCGGCGCGGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASDTVCS*ARRGVL
Trigger: CAGAACCCCGCGCCGAGCCAAGCTGCACACAGTGTC...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS TCA 90 bp AGAGGCCAGGCCGGCCTGCAGGAGGCCACACTCATCGGCGGTGGCTaGGAACTCGGCCCAGTCCTGGTCACTCAGCTGGACGCTGTACTG +
Preference number: 5 (lower is better)
Translates to: RGQAGLQEATLIGGG*ELGPVLVTQLDAVL
Trigger: CAGTACAGCGTCCAGCTGAGTGACCAGGACTGGGCCGAGTTCTCAGCCACCGCCGATGAGTGTGGCCTCCTGCAGGCCGGCCTGGCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS CCA 90 bp TGTGGCTGCGGCGCCCTTGCCCCACCTGCCGGCGGAAGTAGCGGATaGCAGAGATGGTGCCGACGTTGGCCAGCAAGGCTGTTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CGCGALAPPAGGSSG*QRWCRRWPARLFSR
Trigger: CCTGGAAAACAGCCTTGCTGGCCAACGTCGGCACCATCTCTGCCATCCGCTACTTCCGCCGGCAGGTGGGGCAAGGGCGCCGCAGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341290.6
ENST00000433179.3
ENST00000479361.1
CDS-3UTR CAA 90 bp GACGCGGTAGAAGAGAGGGGTCAGAGGGCCCGGGCGAGGGCGGCACCTCGTCCTCACAGCCGTGTCAGATaGCGGCTTGGAGGCAGGTAT +
Preference number: 5 (lower is better)
Translates to: DAVEERGQRARARAAPRPHSRVR*RLGGRY
Trigger: ATACCTGCCTCCAAGCCGCAATCTGACACGGCTGTG...AGGACGAGGTGCCGCCCTCGCCCGGGCCCTCTGACCCCTCTCTTCTACCGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCTTCTTCCTGGGGACTaGGGTGAGACCCAGTGCGGG +
Preference number: 5 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASLLPGD*GETQCG
Trigger: CCCGCACTGGGTCTCACCCAAGTCCCCAGGAAGAAG...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 90 bp GGGACAGGTGTAGACAGGCCCAAACCTGGCCCTGGTCTGTCTTCCTaGACAGGGGACCTGGGGCCAGGCTCAGGAGCTCCTGCAGGACCT +
Preference number: 5 (lower is better)
Translates to: GTGVDRPKPGPGLSS*TGDLGPGSGAPAGP
Trigger: AGGTCCTGCAGGAGCTCCTGAGCCTGGCCCCAGGTCCCCTGTGCAGGAAGACAGACCAGGGCCAGGTTTGGGCCTGTCTACACCTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCCTTTGGCCATCAGCTTaGCCGTCTCAGGACTGGCCG +
Preference number: 5 (lower is better)
Translates to: PRPALGACGRLLILHLPGLWPSA*PSQDWP
Trigger: CGGCCAGTCCTGAGACGGCAAAGCTGATGGCCAAAG...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 90 bp GCACATGTCCGGCCACTGGACGCCTGCCGGATCCTGACCGGCCGCTaGCGCCTCAGCCTCTTCGTTCTCCTCGATGGTGTCACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: AHVRPLDACRILTGR*RLSLFVLLDGVTEE
Trigger: TTCTTCTGTGACACCATCGAGGAGAACGAAGAGGCTGAGGCGGCAGCGGCCGGTCAGGATCCGGCAGGCGTCCAGTGGCCGGACATGTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 90 bp AACGTCTGGGAAGAAGAACTCGCACATGTCCGGCCACTGGACGCCTaGCGGATCCTGACCGGCCGCTGCCGCCTCAGCCTCTTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: NVWEEELAHVRPLDA*RILTGRCRLSLFVL
Trigger: GAGAACGAAGAGGCTGAGGCGGCAGCGGCCGGTCAGGATCCGGCAGGCGTCCAGTGGCCGGACATGTGCGAGTTCTTCTTCCCAGACGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTCCTGCCCGGCTTaGGCCATCAGCTTTGCCGTC +
Preference number: 5 (lower is better)
Translates to: CPELQPECLAAQTPPRSKSSCPA*AISFAV
Trigger: GACGGCAAAGCTGATGGCCAAAGCCGGGCAGGAGGA...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCGCGCGGGGTTCTGATTaGGTCTGTGCCTTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: PRPALGACGRLLILHLPGARGSD*VCALLC
Trigger: ACAGAGCAAGGCACAGACCAAATCAGAACCCCGCGC...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCACTTCTTCCTGGGGACTaGGGTGAGACCCAGTGCGGG +
Preference number: 5 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPLLPGD*GETQCG
Trigger: CCCGCACTGGGTCTCACCCAAGTCCCCAGGAAGAAG...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CCA 90 bp GATCCTGACCGGCCGCTGCCGCCTCAGCCTCTTCGTTCTCCTCGATaGTGTCACAGAAGAAGAACTCGTAGGCCTCCGGGAGGGTCACGG +
Preference number: 5 (lower is better)
Translates to: DPDRPLPPQPLRSPR*CHRRRTRRPPGGSR
Trigger: CCGTGACCCTCCCGGAGGCCTACGAGTTCTTCTTCTGTGACACCATCGAGGAGAACGAAGAGGCTGAGGCGGCAGCGGCCGGTCAGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTGATTTGGTCTGTGCCTaGCTCTGTCACAGGGACAGG +
Preference number: 5 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASDLVCA*LCHRDR
Trigger: CCTGTCCCTGTGACAGAGCAAGGCACAGACCAAATC...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCACGTCCGTGTCCAATaGTGGCTTGGAGATGGGTGT +
Preference number: 5 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASHVRVQ*WLGDGC
Trigger: ACACCCATCTCCAAGCCACAATTGGACACGGACGTG...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTACATCCAGGCCATGTTaGGAGGCAGGTGTGGACACA +
Preference number: 5 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASTSRPC*EAGVDT
Trigger: TGTGTCCACACCTGCCTCCAAACATGGCCTGGATGT...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp TCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAGAGATGGTGCCGACGTaGGCCAGCAAGGCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: SAQQPGSPTVLRTPTQHPEMVPT*ASKAVF
Trigger: GAAAACAGCCTTGCTGGCCAACGTCGGCACCATCTC...TGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTGGCTGCTGAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCCTTGGCCACAGTCCTTaGAGGATCAAGAGTGATGGG +
Preference number: 5 (lower is better)
Translates to: PRPALGACGRLLILHLPGLGHSP*RIKSDG
Trigger: CCCATCACTCTTGATCCTCAAAGGACTGTGGCCAAG...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 90 bp GTGTGCAGCTTGGCTCGGCGCGGGGTTCTGATTTGGTCTGTGCCTTaGTCTGTCACAGGGACAGGTGTAGACAGGCCCAAACCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: VCSLARRGVLIWSVP*SVTGTGVDRPKPGP
Trigger: AGGGCCAGGTTTGGGCCTGTCTACACCTGTCCCTGTGACAGAGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAAGCTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CCA 90 bp GTCGTGGACACTGTGTGCAGCTTGGCTCGGCGCGGGGTTCTGATTTaGTCTGTGCCTTGCTCTGTCACAGGGACAGGTGTAGACAGGCCC +
Preference number: 5 (lower is better)
Translates to: VVDTVCSLARRGVLI*SVPCSVTGTGVDRP
Trigger: GGGCCTGTCTACACCTGTCCCTGTGACAGAGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAAGCTGCACACAGTGTCCACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 90 bp CTTGAGACATCTGGGAGGGCTTCCCAGACAGTCGTGGACACTGTGTaGAGCTTGGCTCGGCGCGGGGTTCTGATTTGGTCTGTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LETSGRASQTVVDTV*SLARRGVLIWSVPC
Trigger: GCAAGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAAGCTGCACACAGTGTCCACGACTGTCTGGGAAGCCCTCCCAGATGTCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGGGTCTCCCACAGTCTaGAGGACCCCCACCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISGSPTV*RTPTQH
Trigger: GTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCC...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGGTGTCCAATTGTGGCTaGGAGATGGGTGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: CPELQPECLAAQTPPRSKVSNCG*EMGVDR
Trigger: TCTGTCTACACCCATCTCCAAGCCACAATTGGACAC...CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAGGGCGAGGCAGGTGCTaGAGGATCCGAGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKGRGRC*RIRGWW
Trigger: CCACCAGCCTCGGATCCTCAAGCACCTGCCTCGCCC...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGACTGCCCATCCCCTCTTaGAGGCCACCCTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRLPIPS*RPPCVL
Trigger: GAGGACACAGGGTGGCCTCAAAGAGGGGATGGGCAG...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp GGCGGCACCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTAAACGCAGGGTGCGGTaGCATTTGATTTCAGATAAA +
Preference number: 5 (lower is better)
Translates to: GGTSSCPGRLWSSPHPASKRRVR*HLISDK
Trigger: TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTT...AGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGGTGCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCTCGTCCTGCCCTGGGCGCCTGTGGTCGTCTCCTCATCCTGCATCTCCCTGGCAGGGTGCGGTTGCATTaGATTTCAGATAAACAACAA +
Preference number: 5 (lower is better)
Translates to: PRPALGACGRLLILHLPGRVRLH*ISDKQQ
Trigger: TTGTTGTTTATCTGAAATCAAATGCAACCGCACCCT...GCCAGGGAGATGCAGGATGAGGAGACGACCACAGGCGCCCAGGGCAGGACGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAATCCAGCCGGAGTGTCTaGCTGCTCAGACCCCTCCGA +
Preference number: 5 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKSSRSV*LLRPLR
Trigger: TCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGA...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACTTTGGCCATCAGCTTaGCCGTCTCAGGACTGGCCG +
Preference number: 5 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKLWPSA*PSQDWP
Trigger: CGGCCAGTCCTGAGACGGCAAAGCTGATGGCCAAAG...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACACAGCCGTGTCAGATaGCGGCTTGGAGGCAGGTAT +
Preference number: 5 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKHSRVR*RLGGRY
Trigger: ATACCTGCCTCCAAGCCGCAATCTGACACGGCTGTG...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTGGGCGAGGCAGGTGCTaGAGGATCCGAGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLGRGRC*RIRGWW
Trigger: CCACCAGCCTCGGATCCTCAAGCACCTGCCTCGCCC...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp AGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGAGTGTCCAATTGTGGCTaGGAGATGGGTGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: SSPCTPEETQGAVAFDFRVSNCG*EMGVDR
Trigger: TCTGTCTACACCCATCTCCAAGCCACAATTGGACAC...TCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAACATCCAGGCCATGTTaGGAGGCAGGTGTGGACACA +
Preference number: 5 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKTSRPC*EAGVDT
Trigger: TGTGTCCACACCTGCCTCCAAACATGGCCTGGATGT...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTGGGTCTCCCACAGTCTaGAGGACCCCCACCCAGCAC +
Preference number: 5 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLGSPTV*RTPTQH
Trigger: GTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCC...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTTCCAGCCGGAGTGTCTaGCTGCTCAGACCCCTCCGA +
Preference number: 5 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLSSRSV*LLRPLR
Trigger: TCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGA...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTCTGCCCATCCCCTCTTaGAGGCCACCCTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLLPIPS*RPPCVL
Trigger: GAGGACACAGGGTGGCCTCAAAGAGGGGATGGGCAG...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACTTGGCCACAGTCCTTaGAGGATCAAGAGTGATGGG +
Preference number: 5 (lower is better)
Translates to: PPAPQKKRRVRLHLISDKLGHSP*RIKSDG
Trigger: CCCATCACTCTTGATCCTCAAAGGACTGTGGCCAAG...TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp CCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTGAGATGGTGCCGACGTaGGCCAGCAAGGCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: PQKKRRVRLHLISDKQQLEMVPT*ASKAVF
Trigger: GAAAACAGCCTTGCTGGCCAACGTCGGCACCATCTC...AAGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAAAACGCAGGGTGCGGTaGCATTTGATTTCAGATAAA +
Preference number: 5 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISKRRVR*HLISDK
Trigger: TTTATCTGAAATCAAATGCAACCGCACCCTGCGTTT...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS-3UTR CAA 90 bp TCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAAGGGTGCGGTTGCATTaGATTTCAGATAAACAACAA +
Preference number: 5 (lower is better)
Translates to: SAPPAPQKKRRVRLHLISRVRLH*ISDKQQ
Trigger: TTGTTGTTTATCTGAAATCAAATGCAACCGCACCCT...TGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 72 bp GGCGCCGGGGCCGAGGGACGGTGGAGCTTCTGCCCGTaGGGACGTGCTGGGTGTCTGCTGACCGGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: GAGAEGRWSFCP*GRAGCLLTGPQ
Trigger: CTGGGGACCGGTCAGCAGACACCCAGCACGTCCGCACGGGCAGAAGCTCCACCGTCCCTCGGCCCCGGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS CCA 72 bp CAGAAGACGCCGGACCAGGGCAGGATGAGAACTGGCTaGGAGGGCTGGCGCCGGGGCCGAGGGACGGTGGAG +
Preference number: 6 (lower is better)
Translates to: QKTPDQGRMRTG*EGWRRGRGTVE
Trigger: CTCCACCGTCCCTCGGCCCCGGCGCCAGCCCTCCCAGCCAGTTCTCATCCTGCCCTGGTCCGGCGTCTTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS GCA 72 bp GGCCGAGGGACGGTGGAGCTTCTGCCCGTGCGGACGTaGTGGGTGTCTGCTGACCGGTCCCCAGGGCCAAGA +
Preference number: 6 (lower is better)
Translates to: GRGTVELLPVRT*WVSADRSPGPR
Trigger: TCTTGGCCCTGGGGACCGGTCAGCAGACACCCAGCACGTCCGCACGGGCAGAAGCTCCACCGTCCCTCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS CCA 72 bp CCCCCTTGGCACCCACAGCTCGCCTCTTCTTTCGGCTaGGGCTCCGTGGTGGGGCTCCAGGGCTATCGGGGG +
Preference number: 6 (lower is better)
Translates to: PPWHPQLASSFG*GSVVGLQGYRG
Trigger: CCCCCGATAGCCCTGGAGCCCCACCACGGAGCCCCAGCCGAAAGAAGAGGCGAGCTGTGGGTGCCAAGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CAA 90 bp CAGGACCTGGCCCCAACTCCTCCTGCCCGGCTTTGGCCATCAGCTTaGCCGTCTCAGGACTGGCCGCAGGGAGCAGCGGGGAGCCCGTCT +
Preference number: 6 (lower is better)
Translates to: QDLAPTPPARLWPSA*PSQDWPQGAAGSPS
Trigger: AGACGGGCTCCCCGCTGCTCCCTGCGGCCAGTCCTGAGACGGCAAAGCTGATGGCCAAAGCCGGGCAGGAGGAGTTGGGGCCAGGTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 72 bp AGAACTCGTAGGCCTCCGGGAGGGTCACGGCAAAGCTaGTCCCGGGCCCGACCCTCGTCACGGCAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: RTRRPPGGSRQS*SRARPSSRQRE
Trigger: CTCCCTCTGCCGTGACGAGGGTCGGGCCCGGGAGCAGCTTTGCCGTGACCCTCCCGGAGGCCTACGAGTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 72 bp CGGCCACTGGACGCCTGCCGGATCCTGACCGGCCGCTaGCGCCTCAGCCTCTTCGTTCTCCTCGATGGTGTC +
Preference number: 6 (lower is better)
Translates to: RPLDACRILTGR*RLSLFVLLDGV
Trigger: GACACCATCGAGGAGAACGAAGAGGCTGAGGCGGCAGCGGCCGGTCAGGATCCGGCAGGCGTCCAGTGGCCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CCA 72 bp GGCGCCCTTGCCCCACCTGCCGGCGGAAGTAGCGGATaGCAGAGATGGTGCCGACGTTGGCCAGCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: GALAPPAGGSSG*QRWCRRWPARL
Trigger: CAGCCTTGCTGGCCAACGTCGGCACCATCTCTGCCATCCGCTACTTCCGCCGGCAGGTGGGGCAAGGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341290.6
ENST00000433179.3
ENST00000479361.1
CDS CCA 72 bp CGAGGGACGGTGGAGCTTCTGCCCGTGCGGACGTGCTaGGTGTCTGCTGACCGGTCCCCAGGGCCAAGACAG +
Preference number: 6 (lower is better)
Translates to: RGTVELLPVRTC*VSADRSPGPRQ
Trigger: CTGTCTTGGCCCTGGGGACCGGTCAGCAGACACCCAGCACGTCCGCACGGGCAGAAGCTCCACCGTCCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS CAA 72 bp GCCCCAACTCCTCCTGCCCGGCTTTGGCCATCAGCTTaGCCGTCTCAGGACTGGCCGCAGGGAGCAGCGGGG +
Preference number: 6 (lower is better)
Translates to: APTPPARLWPSA*PSQDWPQGAAG
Trigger: CCCCGCTGCTCCCTGCGGCCAGTCCTGAGACGGCAAAGCTGATGGCCAAAGCCGGGCAGGAGGAGTTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS TCA 72 bp GCCGGCCTGCAGGAGGCCACACTCATCGGCGGTGGCTaGGAACTCGGCCCAGTCCTGGTCACTCAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: AGLQEATLIGGG*ELGPVLVTQLD
Trigger: GTCCAGCTGAGTGACCAGGACTGGGCCGAGTTCTCAGCCACCGCCGATGAGTGTGGCCTCCTGCAGGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS GCA 72 bp CCCCAACTCCTCCTGCCCGGCTTTGGCCATCAGCTTTaGCGTCTCAGGACTGGCCGCAGGGAGCAGCGGGGA +
Preference number: 6 (lower is better)
Translates to: PQLLLPGFGHQL*RLRTGRREQRG
Trigger: TCCCCGCTGCTCCCTGCGGCCAGTCCTGAGACGGCAAAGCTGATGGCCAAAGCCGGGCAGGAGGAGTTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 72 bp GAAGAAGAACTCGCACATGTCCGGCCACTGGACGCCTaGCGGATCCTGACCGGCCGCTGCCGCCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: EEELAHVRPLDA*RILTGRCRLSL
Trigger: GAGGCTGAGGCGGCAGCGGCCGGTCAGGATCCGGCAGGCGTCCAGTGGCCGGACATGTGCGAGTTCTTCTTC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CCA 72 bp CCTCAGGGATGGAGATGGGCACGGGGTCTCCAGGTATaGGGGCCGGCACAGGATCAGCTCTCGGGAGCGGCT +
Preference number: 6 (lower is better)
Translates to: PQGWRWARGLQV*GPAQDQLSGAA
Trigger: AGCCGCTCCCGAGAGCTGATCCTGTGCCGGCCCCCATACCTGGAGACCCCGTGCCCATCTCCATCCCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CCA 72 bp CCAGGCCGGCCTGCAGGAGGCCACACTCATCGGCGGTaGCTGAGAACTCGGCCCAGTCCTGGTCACTCAGCT +
Preference number: 6 (lower is better)
Translates to: PGRPAGGHTHRR*LRTRPSPGHSA
Trigger: AGCTGAGTGACCAGGACTGGGCCGAGTTCTCAGCCACCGCCGATGAGTGTGGCCTCCTGCAGGCCGGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433179.3
CDS CCA 72 bp GCCCCACCTGCCGGCGGAAGTAGCGGATGGCAGAGATaGTGCCGACGTTGGCCAGCAAGGCTGTTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: APPAGGSSGWQR*CRRWPARLFSR
Trigger: CCTGGAAAACAGCCTTGCTGGCCAACGTCGGCACCATCTCTGCCATCCGCTACTTCCGCCGGCAGGTGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341290.6
ENST00000433179.3
ENST00000479361.1
CDS TCA 72 bp CGGAGAAGCGCACTTTCTTCTTCCTGGGGACTTGGGTaGGACCCAGTGCGGGTGCCCCAGAGCAGCATCCGG +
Preference number: 6 (lower is better)
Translates to: RRSALSSSWGLG*DPVRVPQSSIR
Trigger: CCGGATGCTGCTCTGGGGCACCCGCACTGGGTCTCACCCAAGTCCCCAGGAAGAAGAAAGTGCGCTTCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 72 bp CCACCTGCCGGCGGAAGTAGCGGATGGCAGAGATGGTaGCGACGTTGGCCAGCAAGGCTGTTTTCCAGGCGT +
Preference number: 6 (lower is better)
Translates to: PPAGGSSGWQRW*RRWPARLFSRR
Trigger: ACGCCTGGAAAACAGCCTTGCTGGCCAACGTCGGCACCATCTCTGCCATCCGCTACTTCCGCCGGCAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341290.6
ENST00000433179.3
ENST00000479361.1
CDS CCA 72 bp CGGCCGCTGCCGCCTCAGCCTCTTCGTTCTCCTCGATaGTGTCACAGAAGAAGAACTCGTAGGCCTCCGGGA +
Preference number: 6 (lower is better)
Translates to: RPLPPQPLRSPR*CHRRRTRRPPG
Trigger: TCCCGGAGGCCTACGAGTTCTTCTTCTGTGACACCATCGAGGAGAACGAAGAGGCTGAGGCGGCAGCGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CAA 90 bp TGTGTGCAGCTTGGCTCGGCGCGGGGTTCTGATTTGGTCTGTGCCTaGCTCTGTCACAGGGACAGGTGTAGACAGGCCCAAACCTGGCCC +
Preference number: 6 (lower is better)
Translates to: CVQLGSARGSDLVCA*LCHRDRCRQAQTWP
Trigger: GGGCCAGGTTTGGGCCTGTCTACACCTGTCCCTGTGACAGAGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAAGCTGCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 72 bp TCTGGGAGGGCTTCCCAGACAGTCGTGGACACTGTGTaGAGCTTGGCTCGGCGCGGGGTTCTGATTTGGTCT +
Preference number: 6 (lower is better)
Translates to: SGRASQTVVDTV*SLARRGVLIWS
Trigger: AGACCAAATCAGAACCCCGCGCCGAGCCAAGCTGCACACAGTGTCCACGACTGTCTGGGAAGCCCTCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CCA 72 bp GGCGGAAGTAGCGGATGGCAGAGATGGTGCCGACGTTaGCCAGCAAGGCTGTTTTCCAGGCGTCTGGGGTAT +
Preference number: 6 (lower is better)
Translates to: GGSSGWQRWCRR*PARLFSRRLGY
Trigger: ATACCCCAGACGCCTGGAAAACAGCCTTGCTGGCCAACGTCGGCACCATCTCTGCCATCCGCTACTTCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341290.6
ENST00000433179.3
ENST00000479361.1
CDS CAA 72 bp AGGGCTTCCCAGACAGTCGTGGACACTGTGTGCAGCTaGGCTCGGCGCGGGGTTCTGATTTGGTCTGTGCCT +
Preference number: 6 (lower is better)
Translates to: RASQTVVDTVCS*ARRGVLIWSVP
Trigger: AGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAAGCTGCACACAGTGTCCACGACTGTCTGGGAAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CAA 90 bp AGTCGTGGACACTGTGTGCAGCTTGGCTCGGCGCGGGGTTCTGATTaGGTCTGTGCCTTGCTCTGTCACAGGGACAGGTGTAGACAGGCC +
Preference number: 6 (lower is better)
Translates to: SRGHCVQLGSARGSD*VCALLCHRDRCRQA
Trigger: GGCCTGTCTACACCTGTCCCTGTGACAGAGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAAGCTGCACACAGTGTCCACGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CAA 90 bp ACATCTGGGAGGGCTTCCCAGACAGTCGTGGACACTGTGTGCAGCTaGGCTCGGCGCGGGGTTCTGATTTGGTCTGTGCCTTGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: TSGRASQTVVDTVCS*ARRGVLIWSVPCSV
Trigger: GACAGAGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAAGCTGCACACAGTGTCCACGACTGTCTGGGAAGCCCTCCCAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS TCA 72 bp TGGACACTGTGTGCAGCTTGGCTCGGCGCGGGGTTCTaGTTTGGTCTGTGCCTTGCTCTGTCACAGGGACAG +
Preference number: 6 (lower is better)
Translates to: WTLCAAWLGAGF*FGLCLALSQGQ
Trigger: CTGTCCCTGTGACAGAGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAAGCTGCACACAGTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CAA 72 bp CTTGGCTCGGCGCGGGGTTCTGATTTGGTCTGTGCCTaGCTCTGTCACAGGGACAGGTGTAGACAGGCCCAA +
Preference number: 6 (lower is better)
Translates to: LGSARGSDLVCA*LCHRDRCRQAQ
Trigger: TTGGGCCTGTCTACACCTGTCCCTGTGACAGAGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CAA 72 bp CACTGTGTGCAGCTTGGCTCGGCGCGGGGTTCTGATTaGGTCTGTGCCTTGCTCTGTCACAGGGACAGGTGT +
Preference number: 6 (lower is better)
Translates to: HCVQLGSARGSD*VCALLCHRDRC
Trigger: ACACCTGTCCCTGTGACAGAGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAAGCTGCACACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 72 bp TTGGCTCGGCGCGGGGTTCTGATTTGGTCTGTGCCTTaGTCTGTCACAGGGACAGGTGTAGACAGGCCCAAA +
Preference number: 6 (lower is better)
Translates to: LARRGVLIWSVP*SVTGTGVDRPK
Trigger: TTTGGGCCTGTCTACACCTGTCCCTGTGACAGAGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS GCA 72 bp TTGGCCAGCAAGGCTGTTTTCCAGGCGTCTGGGGTATaGGGATCTGACGTCCTCACAGCCCAGGTGGCAAAA +
Preference number: 6 (lower is better)
Translates to: LASKAVFQASGV*GSDVLTAQVAK
Trigger: TTTTGCCACCTGGGCTGTGAGGACGTCAGATCCGCATACCCCAGACGCCTGGAAAACAGCCTTGCTGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341290.6
ENST00000433179.3
ENST00000479361.1
CDS CCA 72 bp ACTGTGTGCAGCTTGGCTCGGCGCGGGGTTCTGATTTaGTCTGTGCCTTGCTCTGTCACAGGGACAGGTGTA +
Preference number: 6 (lower is better)
Translates to: TVCSLARRGVLI*SVPCSVTGTGV
Trigger: TACACCTGTCCCTGTGACAGAGCAAGGCACAGACCAAATCAGAACCCCGCGCCGAGCCAAGCTGCACACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341290.6
ENST00000433179.3
CDS CCA 72 bp GTGGCAAAAGCTACAAACACCAGGCACATGTCATTCTaGCTGAAGGCAAATGATGGGACAGGCCCCCGGAGC +
Preference number: 6 (lower is better)
Translates to: VAKATNTRHMSF*LKANDGTGPRS
Trigger: GCTCCGGGGGCCTGTCCCATCATTTGCCTTCAGCCAGAATGACATGTGCCTGGTGTTTGTAGCTTTTGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341290.6
ENST00000433179.3
ENST00000479361.1