RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PER3 (Homo sapiens)

Ensembl gene IDs: ENSG00000049246

Ensembl transcript IDs: ENST00000361923.2, ENST00000377532.7, ENST00000377532.8, ENST00000377541.5, ENST00000463106.1, ENST00000473653.1, ENST00000494684.1, ENST00000602883.1, ENST00000613533.4, ENST00000614998.4

Found 556 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCATCGGTCAAGCTGCTGAACCCCCTGCTCACCGCCAGCAGCAGGTaGAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGC +
Preference number: 1 (lower is better)
Translates to: ASVKLLNPLLTASSR*NLGVRECVHPQEER
Trigger: GCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCTGCTGGCGGTGAGCAGGGGGTTCAGCAGCTTGACCGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR GCA 90 bp CCCCTGCTCACCGCCAGCAGCAGGTGCAACCTGGGAGTGCGTGAATaGGTCCACCCACAGGAGGAGCGCTCCTCATGCTCTGACAGTTCT +
Preference number: 1 (lower is better)
Translates to: PLLTASSRCNLGVRE*VHPQEERSSCSDSS
Trigger: AGAACTGTCAGAGCATGAGGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCTGCTGGCGGTGAGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR TCA 90 bp CACTTCTTAAAAGACACAACTACAAACGCCATAGAAAGCGGTGACTaGTGGAGCCTGCAGGACCCTGTGGGCGAGGACAACTGGGCTCGC +
Preference number: 1 (lower is better)
Translates to: HFLKDTTTNAIESGD*WSLQDPVGEDNWAR
Trigger: GCGAGCCCAGTTGTCCTCGCCCACAGGGTCCTGCAGGCTCCATCAGTCACCGCTTTCTATGGCGTTTGTAGTTGTGTCTTTTAAGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR GCA 90 bp CTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTCATaGTCTGACAGTTCTGCGACAAGCACCAGTTTCAAATCAAACCTA +
Preference number: 1 (lower is better)
Translates to: LGVRECVHPQEERSS*SDSSATSTSFKSNL
Trigger: TAGGTTTGATTTGAAACTGGTGCTTGTCGCAGAACTGTCAGAGCATGAGGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR TCA 90 bp ACCGGAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATaGAGCCTGTATGAACGTACTACATTCATGGAAACCATTATGAAA +
Preference number: 1 (lower is better)
Translates to: TGMFHLNYGGERQVE*SLYERTTFMETIMK
Trigger: TTTCATAATGGTTTCCATGAATGTAGTACGTTCATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTCCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR CCA 90 bp GAACTGTCAAAGGCAGCATTTGAAAATAGTTCTGACACCTTAAGATaGAATTACCATCCAGAAAGCCACTACTTTGAAAGGAGATCTGAG +
Preference number: 1 (lower is better)
Translates to: ELSKAAFENSSDTLR*NYHPESHYFERRSE
Trigger: CTCAGATCTCCTTTCAAAGTAGTGGCTTTCTGGATGGTAATTCCATCTTAAGGTGTCAGAACTATTTTCAAATGCTGCCTTTGACAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR TCA 90 bp AAGTTTAAGAAGGAATCAGGGACTTCTCTAAAAAGCACCAGAGAGTaGGCTGATTTATCAAGTAAACAATCACACTCACTTCTTAAAAGA +
Preference number: 1 (lower is better)
Translates to: KFKKESGTSLKSTRE*ADLSSKQSHSLLKR
Trigger: TCTTTTAAGAAGTGAGTGTGATTGTTTACTTGATAAATCAGCTCACTCTCTGGTGCTTTTTAGAGAAGTCCCTGATTCCTTCTTAAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGTGACTGATGGAGCCTaGAGGACCCTGTGGGCGAGG +
Preference number: 2 (lower is better)
Translates to: SRCNLGVRECVHPQEERSVTDGA*RTLWAR
Trigger: CCTCGCCCACAGGGTCCTGCAGGCTCCATCAGTCAC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCATAGAAAGCGGTGACTaGTGGAGCCTGCAGGACCCT +
Preference number: 2 (lower is better)
Translates to: SRCNLGVRECVHPQEERSIESGD*WSLQDP
Trigger: AGGGTCCTGCAGGCTCCATCAGTCACCGCTTTCTAT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCAGTCCCCACAACACTaGCCTGTTCAAGGGCAAACA +
Preference number: 2 (lower is better)
Translates to: SRCNLGVRECVHPQEERSQSPQH*PVQGQT
Trigger: TGTTTGCCCTTGAACAGGGCAGTGTTGTGGGGACTG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCACAACTGGGCTCGCCTaGACGTTTTCTCTTTTGCAG +
Preference number: 2 (lower is better)
Translates to: SRCNLGVRECVHPQEERSTTGLA*TFSLLQ
Trigger: CTGCAAAAGAGAAAACGTCCAGGCGAGCCCAGTTGT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGAACGCCAGGTTGAATaGAGCCTGTATGAACGTACT +
Preference number: 2 (lower is better)
Translates to: SRCNLGVRECVHPQEERSERQVE*SLYERT
Trigger: AGTACGTTCATACAGGCTTCATTCAACCTGGCGTTC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCACTACAGAAGGTCACTaGCAGACAATCTACTGGCTG +
Preference number: 2 (lower is better)
Translates to: SRCNLGVRECVHPQEERSTTEGH*QTIYWL
Trigger: CAGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTACACAACCTGTAGGTaGCATTTCTTCAAGCACTCT +
Preference number: 2 (lower is better)
Translates to: SRCNLGVRECVHPQEERSYTTCR*HFFKHS
Trigger: AGAGTGCTTGAAGAAATGCCACCTACAGGTTGTGTA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCACTCTGGGTGACATCTaGAATAAAGATACACATACC +
Preference number: 2 (lower is better)
Translates to: SRCNLGVRECVHPQEERSTLGDI*NKDTHT
Trigger: GGTATGTGTATCTTTATTTCAGATGTCACCCAGAGT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTGTGCTAATGTGTTGTaGGAAAACCGGAATGTTTCA +
Preference number: 2 (lower is better)
Translates to: SRCNLGVRECVHPQEERSCANVL*ENRNVS
Trigger: TGAAACATTCCGGTTTTCTCACAACACATTAGCACA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTCTGACACCTTAAGATaGAATTACCATCCAGAAAGC +
Preference number: 2 (lower is better)
Translates to: SRCNLGVRECVHPQEERSSDTLR*NYHPES
Trigger: GCTTTCTGGATGGTAATTCCATCTTAAGGTGTCAGA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGCCTGCAGGACCCTGTaGGCGAGGACAACTGGGCTC +
Preference number: 2 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAACRTL*ARTTGL
Trigger: GAGCCCAGTTGTCCTCGCCCACAGGGTCCTGCAGGC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGTGACTGATGGAGCCTaGAGGACCCTGTGGGCGAGG +
Preference number: 2 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAVTDGA*RTLWAR
Trigger: CCTCGCCCACAGGGTCCTGCAGGCTCCATCAGTCAC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGCCTGCAGGACCCTGTaGGCGAGGACAACTGGGCTC +
Preference number: 2 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMACRTL*ARTTGL
Trigger: GAGCCCAGTTGTCCTCGCCCACAGGGTCCTGCAGGC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGTGGGCGAGGACAACTaGGCTCGCCTGGACGTTTTC +
Preference number: 2 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMVGEDN*ARLDVF
Trigger: GAAAACGTCCAGGCGAGCCCAGTTGTCCTCGCCCAC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGATAGAAAGCGGTGACTaGTGGAGCCTGCAGGACCCT +
Preference number: 2 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQIESGD*WSLQDP
Trigger: AGGGTCCTGCAGGCTCCATCAGTCACCGCTTTCTAT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCAGTCCCCACAACACTaGCCTGTTCAAGGGCAAACA +
Preference number: 2 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAQSPQH*PVQGQT
Trigger: TGTTTGCCCTTGAACAGGGCAGTGTTGTGGGGACTG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGTCTTGGAAAGGGTATaGAGGTTCATCCTCACAGTC +
Preference number: 2 (lower is better)
Translates to: ECFILIMEGNARLNEACMVLERV*RFILTV
Trigger: GACTGTGAGGATGAACCTTCATACCCTTTCCAAGAC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGAGGGATCTACAAGGATaGAGGCCAAAACTCAACCCC +
Preference number: 2 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQRDLQG*RPKLNP
Trigger: GGGGTTGAGTTTTGGCCTTCATCCTTGTAGATCCCT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCAGTCCCCACAACACTaGCCTGTTCAAGGGCAAACA +
Preference number: 2 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMQSPQH*PVQGQT
Trigger: TGTTTGCCCTTGAACAGGGCAGTGTTGTGGGGACTG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGACAACTGGGCTCGCCTaGACGTTTTCTCTTTTGCAG +
Preference number: 2 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQTTGLA*TFSLLQ
Trigger: CTGCAAAAGAGAAAACGTCCAGGCGAGCCCAGTTGT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGAACGCCAGGTTGAATaGAGCCTGTATGAACGTACT +
Preference number: 2 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAERQVE*SLYERT
Trigger: AGTACGTTCATACAGGCTTCATTCAACCTGGCGTTC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTAGGAGATCTGAGCTATaGGGATGGTCATCATGGATG +
Preference number: 2 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLARRSEL*GWSSWM
Trigger: CATCCATGATGACCATCCTCATAGCTCAGATCTCCT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGACAACTGGGCTCGCCTaGACGTTTTCTCTTTTGCAG +
Preference number: 2 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMTTGLA*TFSLLQ
Trigger: CTGCAAAAGAGAAAACGTCCAGGCGAGCCCAGTTGT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGAGGAGATCTGAGCTATaGGGATGGTCATCATGGATG +
Preference number: 2 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMRRSEL*GWSSWM
Trigger: CATCCATGATGACCATCCTCATAGCTCAGATCTCCT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCTGTGTAACACGTCTTaGAAAGGGTATGAAGGTTCA +
Preference number: 2 (lower is better)
Translates to: ECFILIMEGNARLNEACMLCNTS*KGYEGS
Trigger: TGAACCTTCATACCCTTTCCAAGACGTGTTACACAG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGACTCTGGGTGACATCTaGAATAAAGATACACATACC +
Preference number: 2 (lower is better)
Translates to: ECFILIMEGNARLNEACMTLGDI*NKDTHT
Trigger: GGTATGTGTATCTTTATTTCAGATGTCACCCAGAGT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCTGTGTAACACGTCTTaGAAAGGGTATGAAGGTTCA +
Preference number: 2 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALCNTS*KGYEGS
Trigger: TGAACCTTCATACCCTTTCCAAGACGTGTTACACAG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTAAAGGGCAACAGCACTaGGTAAGAAGCTCTTTCATT +
Preference number: 2 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAKGQQH*VRSSFI
Trigger: AATGAAAGAGCTTCTTACCCAGTGCTGTTGCCCTTT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR CAA 90 bp AGAAAACCGGAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTaGAATGAAGCCTGTATGAACGTACTACATTCATGGAAACCATTA +
Preference number: 2 (lower is better)
Translates to: RKPECFILIMEGNAR*NEACMNVLHSWKPL
Trigger: TAATGGTTTCCATGAATGTAGTACGTTCATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTCCGGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTTGTGCTAATGTGTTGTaGGAAAACCGGAATGTTTCA +
Preference number: 2 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLACANVL*ENRNVS
Trigger: TGAAACATTCCGGTTTTCTCACAACACATTAGCACA...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCTGTGTAACACGTCTTaGAAAGGGTATGAAGGTTCA +
Preference number: 2 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMLCNTS*KGYEGS
Trigger: TGAACCTTCATACCCTTTCCAAGACGTGTTACACAG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTACACAACCTGTAGGTaGCATTTCTTCAAGCACTCT +
Preference number: 2 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMYTTCR*HFFKHS
Trigger: AGAGTGCTTGAAGAAATGCCACCTACAGGTTGTGTA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGAATTTCACTGGAAGGTaGGAAATCAATAGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQNFTGR*EINRKG
Trigger: CCCTTTCCTATTGATTTCCCACCTTCCAGTGAAATT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGAAAGGGCAACAGCACTaGGTAAGAAGCTCTTTCATT +
Preference number: 2 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMKGQQH*VRSSFI
Trigger: AATGAAAGAGCTTCTTACCCAGTGCTGTTGCCCTTT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGTCTGACACCTTAAGATaGAATTACCATCCAGAAAGC +
Preference number: 2 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQSDTLR*NYHPES
Trigger: GCTTTCTGGATGGTAATTCCATCTTAAGGTGTCAGA...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTGTGCTAATGTGTTGTaGGAAAACCGGAATGTTTCA +
Preference number: 2 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMCANVL*ENRNVS
Trigger: TGAAACATTCCGGTTTTCTCACAACACATTAGCACA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR GCA 72 bp CCCTGCTCACCGCCAGCAGCAGGTGCAACCTGGGAGTaGGTGAATGCGTCCACCCACAGGAGGAGCGCTCCT +
Preference number: 3 (lower is better)
Translates to: PCSPPAAGATWE*VNASTHRRSAP
Trigger: AGGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCTGCTGGCGGTGAGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR TCA 72 bp GCTCACCGCCAGCAGCAGGTGCAACCTGGGAGTGCGTaGATGCGTCCACCCACAGGAGGAGCGCTCCTCATG +
Preference number: 3 (lower is better)
Translates to: AHRQQQVQPGSA*MRPPTGGALLM
Trigger: CATGAGGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCTGCTGGCGGTGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR GCA 72 bp ACCGCCAGCAGCAGGTGCAACCTGGGAGTGCGTGAATaGGTCCACCCACAGGAGGAGCGCTCCTCATGCTCT +
Preference number: 3 (lower is better)
Translates to: TASSRCNLGVRE*VHPQEERSSCS
Trigger: AGAGCATGAGGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCTGCTGGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR GCA 72 bp AAGCTGCTGAACCCCCTGCTCACCGCCAGCAGCAGGTaGAACCTGGGAGTGCGTGAATGCGTCCACCCACAG +
Preference number: 3 (lower is better)
Translates to: KLLNPLLTASSR*NLGVRECVHPQ
Trigger: CTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCTGCTGGCGGTGAGCAGGGGGTTCAGCAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGAGGGGAACGCCAGGTaGAATGAAGCCTGTATGAAC +
Preference number: 3 (lower is better)
Translates to: SRCNLGVRECVHPQEERSEGNAR*NEACMN
Trigger: GTTCATACAGGCTTCATTCAACCTGGCGTTCCCCTC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR GCA 72 bp CGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTCATaGTCTGACAGTTCTGCGACAAGCACCAGTTTCAAA +
Preference number: 3 (lower is better)
Translates to: RECVHPQEERSS*SDSSATSTSFK
Trigger: TTTGAAACTGGTGCTTGTCGCAGAACTGTCAGAGCATGAGGAGCGCTCCTCCTGTGGGTGGACGCATTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR TCA 72 bp AAAGACACAACTACAAACGCCATAGAAAGCGGTGACTaGTGGAGCCTGCAGGACCCTGTGGGCGAGGACAAC +
Preference number: 3 (lower is better)
Translates to: KDTTTNAIESGD*WSLQDPVGEDN
Trigger: GTTGTCCTCGCCCACAGGGTCCTGCAGGCTCCATCAGTCACCGCTTTCTATGGCGTTTGTAGTTGTGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR TCA 72 bp ATGCGTCCACCCACAGGAGGAGCGCTCCTCATGCTCTaGCAGTTCTGCGACAAGCACCAGTTTCAAATCAAA +
Preference number: 3 (lower is better)
Translates to: MRPPTGGALLML*QFCDKHQFQIK
Trigger: TTTGATTTGAAACTGGTGCTTGTCGCAGAACTGTCAGAGCATGAGGAGCGCTCCTCCTGTGGGTGGACGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGAGGGGAACGCCAGGTaGAATGAAGCCTGTATGAAC +
Preference number: 3 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAEGNAR*NEACMN
Trigger: GTTCATACAGGCTTCATTCAACCTGGCGTTCCCCTC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTTGGACGTTTTCTCTTTaGCAGTCCCCACAACACTGC +
Preference number: 3 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAWTFSL*QSPQHC
Trigger: GCAGTGTTGTGGGGACTGCAAAAGAGAAAACGTCCA...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR TCA 72 bp TTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATaGAGCCTGTATGAACGTACTACATTCATGGAAACC +
Preference number: 3 (lower is better)
Translates to: FHLNYGGERQVE*SLYERTTFMET
Trigger: GGTTTCCATGAATGTAGTACGTTCATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCTGGAGCGACCTCTTTaGTATAAATTGATTGGAAAG +
Preference number: 3 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQLERPL*YKLIGK
Trigger: CTTTCCAATCAATTTATACAAAAGAGGTCGCTCCAG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR-3UTR CAA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCTGGAGCGACCTCTTTaGTATAAATTGATTGGAAAG +
Preference number: 3 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMLERPL*YKLIGK
Trigger: CTTTCCAATCAATTTATACAAAAGAGGTCGCTCCAG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
3UTR CCA 72 bp TTACTACAGAAGGTCACTGACAGACAATCTACTGGCTaGTTAATTGTTTCAAATTTGATTCTCTATCAAGCA +
Preference number: 3 (lower is better)
Translates to: LLQKVTDRQSTG*LIVSNLILYQA
Trigger: TGCTTGATAGAGAATCAAATTTGAAACAATTAACCAGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCGGGGCTCCACGTCGTaGTGGGACGGCCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSRGSTS*WDGPQP
Trigger: AGGCTGCGGGCCGTCCCAGCACGACGTGGAGCCCCG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGCTCCTGCGACCCGCTaGTCCCCAGGCTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSAPATR*SPGSRS
Trigger: GCTACGGGAGCCTGGGGAGCAGCGGGTCGCAGGAGC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGTCGGGCTCGAGGTGTaGGGAGAGGAGGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSVGLEV*GEEAAE
Trigger: CTCCGCGGCCTCCTCTCCGCACACCTCGAGCCCGAC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCGGTGTTCGAGCTGCTaGTGTCTGGCGGCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSRCSSC*CLAAPA
Trigger: TGCCGGAGCCGCCAGACAGCAGCAGCTCGAACACCG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCAGCCGGTGTTCGAGCTaGTGCTGTCTGGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSSRCSS*CCLAAP
Trigger: CGGAGCCGCCAGACAGCAGCAGCTCGAACACCGGCT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGGGGCAGCAGGGCTGTaGGTTCTGATGCGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSGAAGL*VLMRSP
Trigger: AGGGGAGCGCATCAGAACGCACAGCCCTGCTGCCCC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCATTCTCCCTGGGAGGTaGCCCCGTGGACAGTGCACC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSILPGR*PRGQCT
Trigger: GGTGCACTGTCCACGGGGTCACCTCCCAGGGAGAAT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCATCGGTCAAGCTGCTaGACCCCCTGCTCACCGCCA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSHRSSC*TPCSPP
Trigger: TGGCGGTGAGCAGGGGGTTCAGCAGCTTGACCGATG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGGACGGCCCGCAGCCTaGTTCTCGCTCACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSGRPAA*FSLTLQ
Trigger: CTGCAAAGTGAGCGAGAAGCAGGCTGCGGGCCGTCC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGCGATGCTGACAAGCTaGTCCTGCGACCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSAMLTS*SCDPLL
Trigger: GAGCAGCGGGTCGCAGGAGCAGCTTGTCAGCATCGC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCCTTTGGCTGGTGACTaGAGGGGGTGGGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSPLAGD*RGWVQS
Trigger: ACTCTGGACCCACCCCCTTCAGTCACCAGCCAAAGG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGGATTCGCTGGGAGGTaGCCCCGTGGACAGAACAGT +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSGFAGR*PRGQNS
Trigger: ACTGTTCTGTCCACGGGGTCACCTCCCAGCGAATCC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGACAAGGGCAGCCCATaGAGGCCTTCCGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSDKGSP*RPSGAV
Trigger: AACTGCACCGGAAGGCCTGCATGGGCTGCCCTTGTC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCTGGGAGTGCGTGAATaGGTCCACCCACAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSLGVRE*VHPQEE
Trigger: CTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGGTGCAACCTGGGAGTaGGTGAATGCGTCCACCCAC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSGATWE*VNASTH
Trigger: GTGGGTGGACGCATTCACGCACTCCCAGGTTGCACC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCACCGCCAGCAGCAGGTaGAACCTGGGAGTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSTASSR*NLGVRE
Trigger: TTCACGCACTCCCAGGTTGCACCTGCTGCTGGCGGT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGCGCTCCTCATGCTCTaGCAGTTCTGCGACAAGCAC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSALLML*QFCDKH
Trigger: GTGCTTGTCGCAGAACTGTCAGAGCATGAGGAGCGC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGGGATGGAGTCCTGCTaGGAGGCAATCCCATGGACA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSGMESC*EAIPWT
Trigger: TGTCCATGGGATTGCCTCCCAGCAGGACTCCATCCC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTCCGCCAATTTCCTCTaGAGATGGAACTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSSANFL*RWNSGL
Trigger: GAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCGGA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCAGCTTCTTCCGCTTGTaGTTCCCTTTCCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSSFFRL*FPFLQP
Trigger: CGGCTGCAGGAAAGGGAAGCACAAGCGGAAGAAGCT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGAGGAGCGCTCCTCATaGTCTGACAGTTCTGCGACA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSEERSS*SDSSAT
Trigger: TGTCGCAGAACTGTCAGAGCATGAGGAGCGCTCCTC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCAATTTCCTCTGCAGATaGAACTCGGGGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSNFLCR*NSGLHR
Trigger: GCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCCTGACCACAGGATGTaGCCGCACCATCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSPDHRM*PHHQLN
Trigger: ATTCAGCTGATGGTGCGGCCACATCCTGTGGTCAGG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCAGCGGAGAGCATAGTTaGGGGCATCTAGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSSGEHS*GHLECL
Trigger: CAAGCACTCTAGATGCCCTCAACTATGCTCTCCGCT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCTGGACACGCTCACGTaGACTGGCTGTAAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSLDTLT*TGCKRS
Trigger: ACTTCTCTTACAGCCAGTTCACGTGAGCGTGTCCAG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGGACATGGACAATGGTaGTGCTGTAACCGCATTGGC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSGHGQW*CCNRIG
Trigger: GCCAATGCGGTTACAGCAGCACCATTGTCCATGTCC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGGGGATGATCCGGAATaGGGAGTGACACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSGDDPE*GVTLLL
Trigger: CAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTGTCGCCCCCAGGAATaGACATGGCAAAAACGATGG +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSCRPQE*TWQKRW
Trigger: CCATCGTTTTTGCCATGTCCATTCCTGGGGGCGACA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTCACTTTGCAGTCAGTaGCAGACACCGGTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSSLCSQ*QTPVSH
Trigger: GTGAGAAACCGGTGTCTGTCACTGACTGCAAAGTGA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCATCCGGAATGGGGAGTaGCACTTCTCTTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSIRNGE*HFSCFL
Trigger: CAGAAAGCAAGAGAAGTGTCACTCCCCATTCCGGAT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCAAGGAAGCTGAGCTCTaGCAGTGTGCGCGTAGAATA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSKEAEL*QCARRI
Trigger: TATTCTACGCGCACACTGCCAGAGCTCAGCTTCCTT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCTCCTCCTGTGTCTATaGACCGTCCATTTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSLLLCL*TVHLLA
Trigger: TGCCAACAAATGGACGGTCCATAGACACAGGAGGAG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTTCTGCTCTTCCTTCTaGGTGTGCGCTGACAGAACA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSFCSSF*VCADRT
Trigger: TGTTCTGTCAGCGCACACCCAGAAGGAAGAGCAGAA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCACCCTCTCAGGTACCTaGTATGTCATGAGAATGCGC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSTLSGT*YVMRMR
Trigger: GCGCATTCTCATGACATACCAGGTACCTGAGAGGGT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCAATACCCTCATGTCTTaGGGTGCAAGCAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSNTLMS*GASRST
Trigger: TGTTGACCTGCTTGCACCTCAAGACATGAGGGTATT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTCCCCGTCACTGGCTTaGATGATGATTTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSSPSLA*MMIWSL
Trigger: CAATGACCAAATCATCATTCAAGCCAGTGACGGGGA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCACTGTCGATACAGTTaGTCTGTTGATAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSHCRYS*SVDRMG
Trigger: GCCCATCCTATCAACAGATCAACTGTATCGACAGTG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGTGTTCCTTCTCATCTaGTCTGGAGATTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSVFLLI*SGDSEG
Trigger: ACCCTCTGAATCTCCAGATCAGATGAGAAGGAACAC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCAGGAGATCTGAGCTATaGGGATGGTCATCATGGATG +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSRRSEL*GWSSWM
Trigger: CATCCATGATGACCATCCTCATAGCTCAGATCTCCT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGGCTTGGACATCATCTaGCTTGTGGTTCTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSGLDII*LVVLFV
Trigger: GACAAACAGAACCACAAGGCAGATGATGTCCAAGCC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCATGGACAATGGTGCTaGTGTAACCGCATTGGCTTA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSHGQWC*CNRIGL
Trigger: TAAGCCAATGCGGTTACAGCAGCACCATTGTCCATG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
3UTR CAA 72 bp GCGAGGACAACTGGGCTCGCCTGGACGTTTTCTCTTTaGCAGTCCCCACAACACTGCCCTGTTCAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ARTTGLAWTFSL*QSPQHCPVQGQ
Trigger: TTGCCCTTGAACAGGGCAGTGTTGTGGGGACTGCAAAAGAGAAAACGTCCAGGCGAGCCCAGTTGTCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCTTCATTTTCACAAGTaGCACAGGCTTGAATGTCGA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSLHFHK*HRLECR
Trigger: TCGACATTCAAGCCTGTGTCACTTGTGAAAATGAAG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCGGGGCTCCACGTCGTaGTGGGACGGCCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMRGSTS*WDGPQP
Trigger: AGGCTGCGGGCCGTCCCAGCACGACGTGGAGCCCCG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCACAATACTCAGTTTGTaGGCACGTGTTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSTILSL*ARVPSH
Trigger: ATGAGAAGGAACACGTGCCCACAAACTGAGTATTGT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361923.2
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCTGTGTAACACGTCTTaGAAAGGGTATGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSLCNTS*KGYEGS
Trigger: TGAACCTTCATACCCTTTCCAAGACGTGTTACACAG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGTCGGGCTCGAGGTGTaGGGAGAGGAGGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMVGLEV*GEEAAE
Trigger: CTCCGCGGCCTCCTCTCCGCACACCTCGAGCCCGAC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCTTAGCATATATGAGTaGGCAATGATCCTGATAGCT +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSLSIYE*AMILIA
Trigger: AGCTATCAGGATCATTGCGCACTCATATATGCTAAG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGGCTCCACGTCGTGCTaGGACGGCCCGCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMGSTSC*DGPQPA
Trigger: AGCAGGCTGCGGGCCGTCCCAGCACGACGTGGAGCC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGATTCTTTTATTCACTaGGATCCGAGGAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSDSFIH*DPRSFI
Trigger: TATGAAGCTCCTCGGATCCCAGTGAATAAAAGAATC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCACATCATCTGCCTTGTaGTTCTGTTTGTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSTSSAL*FCLSSS
Trigger: AGAAGAAGACAAACAGAACCACAAGGCAGATGATGT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCACTGTGAATTACAATaGAGTGTCACTCAATTGCAA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSHCELQ*SVTQLQ
Trigger: TTGCAATTGAGTGACACTTCATTGTAATTCACAGTG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGCTCCTGCGACCCGCTaGTCCCCAGGCTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQAPATR*SPGSRS
Trigger: GCTACGGGAGCCTGGGGAGCAGCGGGTCGCAGGAGC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGCTCCTGCGACCCGCTaGTCCCCAGGCTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAAPATR*SPGSRS
Trigger: GCTACGGGAGCCTGGGGAGCAGCGGGTCGCAGGAGC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGTCGGGCTCGAGGTGTaGGGAGAGGAGGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAVGLEV*GEEAAE
Trigger: CTCCGCGGCCTCCTCTCCGCACACCTCGAGCCCGAC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGGCTCCACGTCGTGCTaGGACGGCCCGCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAGSTSC*DGPQPA
Trigger: AGCAGGCTGCGGGCCGTCCCAGCACGACGTGGAGCC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCCTGGCTGGGCACCATaGCGGCAGGTGGGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMPGWAP*RQVGRS
Trigger: CGACCTTCCCACCTGCCGCCATGGTGCCCAGCCAGG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGGTAAGGGGCCTGGCTaGGCACCATGGCGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMGKGPG*APWRQV
Trigger: CACCTGCCGCCATGGTGCCCAGCCAGGCCCCTTACC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGGTAAGGGGCCTGGCTaGGCACCATGGCGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMGKGPG*APWRQV
Trigger: CACCTGCCGCCATGGTGCCCAGCCAGGCCCCTTACC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCAGGGCTGTGCGTTCTaGTGCGCTCCCCTGCGGGGA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAQGCAF*CAPLRG
Trigger: TCCCCGCAGGGGAGCGCATCAGAACGCACAGCCCTG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGTATTCTCTTCCGGGTaGGGTCGCGGCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMVFSSG*GRGWEG
Trigger: CCCCTCCCAGCCGCGACCTCACCCGGAAGAGAATAC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCGGTGTTCGAGCTGCTaGTGTCTGGCGGCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMRCSSC*CLAAPA
Trigger: TGCCGGAGCCGCCAGACAGCAGCAGCTCGAACACCG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGAGCCGGTGTTCGAGCTaGTGCTGTCTGGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMSRCSS*CCLAAP
Trigger: CGGAGCCGCCAGACAGCAGCAGCTCGAACACCGGCT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGTCTGATGCGCTCCCCTaGGGGGACCAGAGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMSDALP*GDQSRC
Trigger: ACACCGGCTCTGGTCCCCGCAGGGGAGCGCATCAGA...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGGGGCAGCAGGGCTGTaGGTTCTGATGCGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMGAAGL*VLMRSP
Trigger: AGGGGAGCGCATCAGAACGCACAGCCCTGCTGCCCC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGGCTCCACGTCGTGCTaGGACGGCCCGCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMGSTSC*DGPQPA
Trigger: AGCAGGCTGCGGGCCGTCCCAGCACGACGTGGAGCC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTACTTCAAAACTTTTTaGTGTATGGCAACCATCAGA +
Preference number: 4 (lower is better)
Translates to: SRCNLGVRECVHPQEERSYFKTF*CMATIR
Trigger: TCTGATGGTTGCCATACACCAAAAAGTTTTGAAGTA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCCACACGGTGCCCACTaGCCTCACTGGAGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMPHGAH*PHWRRR
Trigger: TCGCCTCCTCCAGTGAGGCCAGTGGGCACCGTGTGG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCCACACGGTGCCCACTaGCCTCACTGGAGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMPHGAH*PHWRRR
Trigger: TCGCCTCCTCCAGTGAGGCCAGTGGGCACCGTGTGG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCCTGGCTGGGCACCATaGCGGCAGGTGGGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAPGWAP*RQVGRS
Trigger: CGACCTTCCCACCTGCCGCCATGGTGCCCAGCCAGG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGCCTGCAGGACCCTGTaGGCGAGGACAACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMACRTL*ARTTGL
Trigger: GAGCCCAGTTGTCCTCGCCCACAGGGTCCTGCAGGC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCAGGGCTGTGCGTTCTaGTGCGCTCCCCTGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSQGCAF*CAPLRG
Trigger: TCCCCGCAGGGGAGCGCATCAGAACGCACAGCCCTG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGTATTCTCTTCCGGGTaGGGTCGCGGCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQVFSSG*GRGWEG
Trigger: CCCCTCCCAGCCGCGACCTCACCCGGAAGAGAATAC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGATTCTCCCTGGGAGGTaGCCCCGTGGACAGTGCACC +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMILPGR*PRGQCT
Trigger: GGTGCACTGTCCACGGGGTCACCTCCCAGGGAGAAT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCATCGGTCAAGCTGCTaGACCCCCTGCTCACCGCCA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMHRSSC*TPCSPP
Trigger: TGGCGGTGAGCAGGGGGTTCAGCAGCTTGACCGATG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGGACGGCCCGCAGCCTaGTTCTCGCTCACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMGRPAA*FSLTLQ
Trigger: CTGCAAAGTGAGCGAGAAGCAGGCTGCGGGCCGTCC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCTGACAAGCTGCTCCTaGGACCCGCTGCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALTSCS*DPLLPR
Trigger: CCTGGGGAGCAGCGGGTCGCAGGAGCAGCTTGTCAG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCGGTGTTCGAGCTGCTaGTGTCTGGCGGCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLARCSSC*CLAAPA
Trigger: TGCCGGAGCCGCCAGACAGCAGCAGCTCGAACACCG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTTCTGATGCGCTCCCCTaGGGGGACCAGAGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLASDALP*GDQSRC
Trigger: ACACCGGCTCTGGTCCCCGCAGGGGAGCGCATCAGA...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGGGGCAGCAGGGCTGTaGGTTCTGATGCGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAGAAGL*VLMRSP
Trigger: AGGGGAGCGCATCAGAACGCACAGCCCTGCTGCCCC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGTGACTGATGGAGCCTaGAGGACCCTGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMVTDGA*RTLWAR
Trigger: CCTCGCCCACAGGGTCCTGCAGGCTCCATCAGTCAC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGTGACTGATGGAGCCTaGAGGACCCTGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMVTDGA*RTLWAR
Trigger: CCTCGCCCACAGGGTCCTGCAGGCTCCATCAGTCAC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGGCTCCCGTAGCCGCTaGACACGCTCACGTGAACTG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMGSRSR*TRSREL
Trigger: CAGTTCACGTGAGCGTGTCCAGCGGCTACGGGAGCC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCGAGCTGCTGCTGTCTaGCGGCTCCGGCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMRAAAV*RLRQLL
Trigger: AAGAAGCTGCCGGAGCCGCCAGACAGCAGCAGCTCG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCGAGCTGCTGCTGTCTaGCGGCTCCGGCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMRAAAV*RLRQLL
Trigger: AAGAAGCTGCCGGAGCCGCCAGACAGCAGCAGCTCG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCACCATGGCGGCAGGTaGGAAGGTCGGGCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAHHGGR*EGRARG
Trigger: ACCTCGAGCCCGACCTTCCCACCTGCCGCCATGGTG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCCTGGCTGGGCACCATaGCGGCAGGTGGGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMPGWAP*RQVGRS
Trigger: CGACCTTCCCACCTGCCGCCATGGTGCCCAGCCAGG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGGTAAGGGGCCTGGCTaGGCACCATGGCGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSGKGPG*APWRQV
Trigger: CACCTGCCGCCATGGTGCCCAGCCAGGCCCCTTACC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCTTCTGGGTGTGCGCTaGCAGAACAGCCGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMLLGVR*QNSRCE
Trigger: CTCACAGCGGCTGTTCTGTCAGCGCACACCCAGAAG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGTATTCTCTTCCGGGTaGGGTCGCGGCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSVFSSG*GRGWEG
Trigger: CCCCTCCCAGCCGCGACCTCACCCGGAAGAGAATAC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCCTTTGGCTGGTGACTaGAGGGGGTGGGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMPLAGD*RGWVQS
Trigger: ACTCTGGACCCACCCCCTTCAGTCACCAGCCAAAGG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCTCTCCTTTGGCTGGTaGCTGAAGGGGGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMLSFGW*LKGVGP
Trigger: TGGACCCACCCCCTTCAGTCACCAGCCAAAGGAGAG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGGATTCGCTGGGAGGTaGCCCCGTGGACAGAACAGT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMGFAGR*PRGQNS
Trigger: ACTGTTCTGTCCACGGGGTCACCTCCCAGCGAATCC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCAACCTGGGAGTGCGTaGATGCGTCCACCCACAGGA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMQPGSA*MRPPTG
Trigger: TCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGGACGGCCCGCAGCCTaGTTCTCGCTCACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAGRPAA*FSLTLQ
Trigger: CTGCAAAGTGAGCGAGAAGCAGGCTGCGGGCCGTCC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCTGACAAGCTGCTCCTaGGACCCGCTGCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMLTSCS*DPLLPR
Trigger: CCTGGGGAGCAGCGGGTCGCAGGAGCAGCTTGTCAG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGTCTCCTCCACACGGTaGCCACTGGCCTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQVSSTR*PLASLE
Trigger: CTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGAGAC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGTCTCCTCCACACGGTaGCCACTGGCCTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAVSSTR*PLASLE
Trigger: CTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGAGAC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTCTGATGCGCTCCCCTaGGGGGACCAGAGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMSDALP*GDQSRC
Trigger: ACACCGGCTCTGGTCCCCGCAGGGGAGCGCATCAGA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTATGCAGGCCTTCCGGTaGAGTTCCGGGGGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAMQAFR*SSGGCV
Trigger: TACGCAGCCCCCGGAACTGCACCGGAAGGCCTGCAT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGGCTCCCGTAGCCGCTaGACACGCTCACGTGAACTG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAGSRSR*TRSREL
Trigger: CAGTTCACGTGAGCGTGTCCAGCGGCTACGGGAGCC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCCACACGGTGCCCACTaGCCTCACTGGAGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSPHGAH*PHWRRR
Trigger: TCGCCTCCTCCAGTGAGGCCAGTGGGCACCGTGTGG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCACCATGGCGGCAGGTaGGAAGGTCGGGCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSHHGGR*EGRARG
Trigger: ACCTCGAGCCCGACCTTCCCACCTGCCGCCATGGTG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGTGGATGGGGATTCGCTaGGAGGTGACCCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMWMGIR*EVTPWT
Trigger: TGTCCACGGGGTCACCTCCCAGCGAATCCCCATCCA...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGCCTGCAGGACCCTGTaGGCGAGGACAACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSACRTL*ARTTGL
Trigger: GAGCCCAGTTGTCCTCGCCCACAGGGTCCTGCAGGC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGCAGCAGGTGCAACCTaGGAGTGCGTGAATGCGTCC +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMAAGAT*ECVNAS
Trigger: GGACGCATTCACGCACTCCCAGGTTGCACCTGCTGC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGCAGCAGGTGCAACCTaGGAGTGCGTGAATGCGTCC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMAAGAT*ECVNAS
Trigger: GGACGCATTCACGCACTCCCAGGTTGCACCTGCTGC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCTTCTGGGTGTGCGCTaGCAGAACAGCCGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALLGVR*QNSRCE
Trigger: CTCACAGCGGCTGTTCTGTCAGCGCACACCCAGAAG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCTCTCCTTTGGCTGGTaGCTGAAGGGGGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQLSFGW*LKGVGP
Trigger: TGGACCCACCCCCTTCAGTCACCAGCCAAAGGAGAG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTATTCTCCCTGGGAGGTaGCCCCGTGGACAGTGCACC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSILPGR*PRGQCT
Trigger: GGTGCACTGTCCACGGGGTCACCTCCCAGGGAGAAT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGCGCTCCTCATGCTCTaGCAGTTCTGCGACAAGCAC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMALLML*QFCDKH
Trigger: GTGCTTGTCGCAGAACTGTCAGAGCATGAGGAGCGC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCAACCTGGGAGTGCGTaGATGCGTCCACCCACAGGA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAQPGSA*MRPPTG
Trigger: TCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCATCGGTCAAGCTGCTaGACCCCCTGCTCACCGCCA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSHRSSC*TPCSPP
Trigger: TGGCGGTGAGCAGGGGGTTCAGCAGCTTGACCGATG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGCGATGCTGACAAGCTaGTCCTGCGACCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMAMLTS*SCDPLL
Trigger: GAGCAGCGGGTCGCAGGAGCAGCTTGTCAGCATCGC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGTCTCCTCCACACGGTaGCCACTGGCCTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSVSSTR*PLASLE
Trigger: CTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGAGAC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCACCATTCGGTTCTGTaGGTGTCCCCGTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMHHSVL*VSPSLA
Trigger: AGCCAGTGACGGGGACACGCACAGAACCGAATGGTG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCCGGCCGACCGCGTCTaGTTGGAAGTAGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMPADRV*LEVESP
Trigger: AGGAGATTCTACTTCCAAGCAGACGCGGTCGGCCGG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGTGCTTCCCTTTCCTaGAGCCGGCCGACCGCGTCT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSCASLS*SRPTAS
Trigger: AGACGCGGTCGGCCGGCTGCAGGAAAGGGAAGCACA...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTGTGCTTCCCTTTCCTaGAGCCGGCCGACCGCGTCT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMCASLS*SRPTAS
Trigger: AGACGCGGTCGGCCGGCTGCAGGAAAGGGAAGCACA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGATGCAGGCCTTCCGGTaGAGTTCCGGGGGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMMQAFR*SSGGCV
Trigger: TACGCAGCCCCCGGAACTGCACCGGAAGGCCTGCAT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGACAAGGGCAGCCCATaGAGGCCTTCCGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQDKGSP*RPSGAV
Trigger: AACTGCACCGGAAGGCCTGCATGGGCTGCCCTTGTC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCTGGGAGTGCGTGAATaGGTCCACCCACAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQLGVRE*VHPQEE
Trigger: CTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGACCGCCAGCAGCAGGTaGAACCTGGGAGTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQTASSR*NLGVRE
Trigger: TTCACGCACTCCCAGGTTGCACCTGCTGCTGGCGGT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCGTGGACAGGATCTGTaGAGCTCCTCCTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMRGQDL*SSSSCV
Trigger: GACACAGGAGGAGGAGCTCCACAGATCCTGTCCACG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGGGATGGAGTCCTGCTaGGAGGCAATCCCATGGACA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMGMESC*EAIPWT
Trigger: TGTCCATGGGATTGCCTCCCAGCAGGACTCCATCCC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGTGGGCGAGGACAACTaGGCTCGCCTGGACGTTTTC +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQVGEDN*ARLDVF
Trigger: GAAAACGTCCAGGCGAGCCCAGTTGTCCTCGCCCAC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCCTTTGGCTGGTGACTaGAGGGGGTGGGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMPLAGD*RGWVQS
Trigger: ACTCTGGACCCACCCCCTTCAGTCACCAGCCAAAGG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCTCTCCTTTGGCTGGTaGCTGAAGGGGGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMLSFGW*LKGVGP
Trigger: TGGACCCACCCCCTTCAGTCACCAGCCAAAGGAGAG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGGATTCGCTGGGAGGTaGCCCCGTGGACAGAACAGT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMGFAGR*PRGQNS
Trigger: ACTGTTCTGTCCACGGGGTCACCTCCCAGCGAATCC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCAACCTGGGAGTGCGTaGATGCGTCCACCCACAGGA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMQPGSA*MRPPTG
Trigger: TCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGACCACCACCATTCGCTaGCTCACCACCACCATTCGG +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQTTTIR*LTTTIR
Trigger: CCGAATGGTGGTGGTGAGTCAGCGAATGGTGGTGGT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGTCCGCCAATTTCCTCTaGAGATGGAACTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMSANFL*RWNSGL
Trigger: GAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCGGA...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCACCATTCGGTTCTGTaGGTGTCCCCGTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAHHSVL*VSPSLA
Trigger: AGCCAGTGACGGGGACACGCACAGAACCGAATGGTG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGAACCGCATTGGCTTATaGCCGACCCCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMNRIGL*PTPSSA
Trigger: TGCTGAGCTTGGGGTCGGGCATAAGCCAATGCGGTT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGTCTTCCTTCTGGGTGTaGGCTGACAGAACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMSSFWV*ADRTAA
Trigger: AGCGGCTGTTCTGTCAGCGCACACCCAGAAGGAAGA...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCCGGCCGACCGCGTCTaGTTGGAAGTAGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAPADRV*LEVESP
Trigger: AGGAGATTCTACTTCCAAGCAGACGCGGTCGGCCGG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGACAAGGGCAGCCCATaGAGGCCTTCCGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMDKGSP*RPSGAV
Trigger: AACTGCACCGGAAGGCCTGCATGGGCTGCCCTTGTC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGTGCCCCTCGCTTTGTaGCTCCCACTTTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQVPLAL*LPLFLL
Trigger: GAGGAGGAAAAGTGGGAGGCACAAAGCGAGGGGCAC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTACCGCCAGCAGCAGGTaGAACCTGGGAGTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSTASSR*NLGVRE
Trigger: TTCACGCACTCCCAGGTTGCACCTGCTGCTGGCGGT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCGTGGACAGGATCTGTaGAGCTCCTCCTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQRGQDL*SSSSCV
Trigger: GACACAGGAGGAGGAGCTCCACAGATCCTGTCCACG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGAGCTCAGCATCGCCGTaGACAGGATCTGTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQSSASP*TGSVEL
Trigger: GAGCTCCACAGATCCTGTCCACGGCGATGCTGAGCT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTAGCTCAGCATCGCCGTaGACAGGATCTGTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLASSASP*TGSVEL
Trigger: GAGCTCCACAGATCCTGTCCACGGCGATGCTGAGCT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGGCTGTCTCTGGGGGTaGGACATGGACAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQGCLWG*DMDNGA
Trigger: AGCACCATTGTCCATGTCCCACCCCCAGAGACAGCC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCGAGGTCAAAGGGGCTaGCTGCATGTTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLARGQRG*LHVQGP
Trigger: TGGACCCTGAACATGCAGCCAGCCCCTTTGACCTCG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCGAGGTCAAAGGGGCTaGCTGCATGTTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQRGQRG*LHVQGP
Trigger: TGGACCCTGAACATGCAGCCAGCCCCTTTGACCTCG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGATGGGGATTCGCTaGGAGGTGACCCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSWMGIR*EVTPWT
Trigger: TGTCCACGGGGTCACCTCCCAGCGAATCCCCATCCA...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTGGATGGGGATTCGCTaGGAGGTGACCCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMWMGIR*EVTPWT
Trigger: TGTCCACGGGGTCACCTCCCAGCGAATCCCCATCCA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCCTGACCACAGGATGTaGCCGCACCATCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMPDHRM*PHHQLN
Trigger: ATTCAGCTGATGGTGCGGCCACATCCTGTGGTCAGG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCCTGACCACAGGATGTaGCCGCACCATCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMPDHRM*PHHQLN
Trigger: ATTCAGCTGATGGTGCGGCCACATCCTGTGGTCAGG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGTGGGCGAGGACAACTaGGCTCGCCTGGACGTTTTC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSVGEDN*ARLDVF
Trigger: GAAAACGTCCAGGCGAGCCCAGTTGTCCTCGCCCAC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGCAGCAGGTGCAACCTaGGAGTGCGTGAATGCGTCC +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMAAGAT*ECVNAS
Trigger: GGACGCATTCACGCACTCCCAGGTTGCACCTGCTGC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCAACAAAGTTTAAGCTaGGGAGAGCCCCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAQQSLS*GEPPRG
Trigger: CCCCCGAGGGGGCTCTCCCCAGCTTAAACTTTGTTG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGAGCGGAGAGCATAGTTaGGGGCATCTAGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMSGEHS*GHLECL
Trigger: CAAGCACTCTAGATGCCCTCAACTATGCTCTCCGCT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGAATCAGATAGGGGATaGTCCGGAATGGGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMESDRG*SGMGSD
Trigger: GTCACTCCCCATTCCGGATCATCCCCTATCTGATTC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGTCTTCTACCAGAACCTaGCCACAGGATGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQSSTRT*PQDVAA
Trigger: TGCGGCCACATCCTGTGGTCAGGTTCTGGTAGAAGA...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTATAGAAAGCGGTGACTaGTGGAGCCTGCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAIESGD*WSLQDP
Trigger: AGGGTCCTGCAGGCTCCATCAGTCACCGCTTTCTAT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTACCACCACCATTCGCTaGCTCACCACCACCATTCGG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSTTTIR*LTTTIR
Trigger: CCGAATGGTGGTGGTGAGTCAGCGAATGGTGGTGGT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGTCCGCCAATTTCCTCTaGAGATGGAACTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQSANFL*RWNSGL
Trigger: GAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCGGA...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGCTGTTCACTGTGGCTaGTGTCCGCCAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMAVHCG*CPPISS
Trigger: AGAGGAAATTGGCGGACAGCAGCCACAGTGAACAGC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTAACCGCATTGGCTTATaGCCGACCCCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLANRIGL*PTPSSA
Trigger: TGCTGAGCTTGGGGTCGGGCATAAGCCAATGCGGTT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGGACATGGACAATGGTaGTGCTGTAACCGCATTGGC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMGHGQW*CCNRIG
Trigger: GCCAATGCGGTTACAGCAGCACCATTGTCCATGTCC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCCGGCCGACCGCGTCTaGTTGGAAGTAGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMPADRV*LEVESP
Trigger: AGGAGATTCTACTTCCAAGCAGACGCGGTCGGCCGG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGTGCCCCTCGCTTTGTaGCTCCCACTTTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSVPLAL*LPLFLL
Trigger: GAGGAGGAAAAGTGGGAGGCACAAAGCGAGGGGCAC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCAGTCCCCACAACACTaGCCTGTTCAAGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMQSPQH*PVQGQT
Trigger: TGTTTGCCCTTGAACAGGGCAGTGTTGTGGGGACTG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGAGGAGCGCTCCTCATaGTCTGACAGTTCTGCGACA +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQEERSS*SDSSAT
Trigger: TGTCGCAGAACTGTCAGAGCATGAGGAGCGCTCCTC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGGGGATGATCCGGAATaGGGAGTGACACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMGDDPE*GVTLLL
Trigger: CAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGGGGATGATCCGGAATaGGGAGTGACACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMGDDPE*GVTLLL
Trigger: CAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCGTGGACAGGATCTGTaGAGCTCCTCCTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSRGQDL*SSSSCV
Trigger: GACACAGGAGGAGGAGCTCCACAGATCCTGTCCACG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGAGCTCAGCATCGCCGTaGACAGGATCTGTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMSSASP*TGSVEL
Trigger: GAGCTCCACAGATCCTGTCCACGGCGATGCTGAGCT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGAGGAAAAGGGAAAGCTaGGTAAGGCTGCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMRKRES*VRLQAL
Trigger: GAGGGCTTGCAGCCTTACCCAGCTTTCCCTTTTCCT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGTCCTCCTCTCTCCTTTaGCTGGTGACTGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQSSSLL*LVTEGG
Trigger: ACCCCCTTCAGTCACCAGCCAAAGGAGAGAGGAGGA...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGGGATGGAGTCCTGCTaGGAGGCAATCCCATGGACA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSGMESC*EAIPWT
Trigger: TGTCCATGGGATTGCCTCCCAGCAGGACTCCATCCC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCTGCTGAACCAGTTCTaGATGGGGATTCGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALLNQF*MGIRWE
Trigger: CTCCCAGCGAATCCCCATCCAGAACTGGTTCAGCAG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCAACAAAGTTTAAGCTaGGGAGAGCCCCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSQQSLS*GEPPRG
Trigger: CCCCCGAGGGGGCTCTCCCCAGCTTAAACTTTGTTG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCAACAAAGTTTAAGCTaGGGAGAGCCCCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMQQSLS*GEPPRG
Trigger: CCCCCGAGGGGGCTCTCCCCAGCTTAAACTTTGTTG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGTCACTTTGCAGTCAGTaGCAGACACCGGTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMSLCSQ*QTPVSH
Trigger: GTGAGAAACCGGTGTCTGTCACTGACTGCAAAGTGA...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGAGCAGGTCAACAAAGTaGGAAGACGCCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMSRSTK*EDARTS
Trigger: AGATGTCCTGGCGTCTTCTCACTTTGTTGACCTGCT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGAATCAGATAGGGGATaGTCCGGAATGGGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAESDRG*SGMGSD
Trigger: GTCACTCCCCATTCCGGATCATCCCCTATCTGATTC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCTGGACACGCTCACGTaGACTGGCTGTAAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQLDTLT*TGCKRS
Trigger: ACTTCTCTTACAGCCAGTTCACGTGAGCGTGTCCAG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGTACCTGGTATGTCATaGGAATGCGCTCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMVPGMS*ECAQVS
Trigger: AGACACCTGAGCGCATTCTCATGACATACCAGGTAC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGTACCTGGTATGTCATaGGAATGCGCTCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMVPGMS*ECAQVS
Trigger: AGACACCTGAGCGCATTCTCATGACATACCAGGTAC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTCTTCTACCAGAACCTaGCCACAGGATGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMSSTRT*PQDVAA
Trigger: TGCGGCCACATCCTGTGGTCAGGTTCTGGTAGAAGA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGATAGAAAGCGGTGACTaGTGGAGCCTGCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMIESGD*WSLQDP
Trigger: AGGGTCCTGCAGGCTCCATCAGTCACCGCTTTCTAT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGCTGTTCACTGTGGCTaGTGTCCGCCAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQAVHCG*CPPISS
Trigger: AGAGGAAATTGGCGGACAGCAGCCACAGTGAACAGC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGAGTGCTTGGTTTATTaGGTCTCTCCGAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMECLVY*VSPRGS
Trigger: ACTTCCCCTCGGAGAGACGCAATAAACCAAGCACTC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCCTCAAGACTGTACATaGTCACATCTGCCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMPQDCT*SHLPEV
Trigger: CACCTCAGGCAGATGTGAGCATGTACAGTCTTGAGG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAACCGCATTGGCTTATaGCCGACCCCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSNRIGL*PTPSSA
Trigger: TGCTGAGCTTGGGGTCGGGCATAAGCCAATGCGGTT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTCTTCCTTCTGGGTGTaGGCTGACAGAACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSSSFWV*ADRTAA
Trigger: AGCGGCTGTTCTGTCAGCGCACACCCAGAAGGAAGA...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTCTTCCTTCTGGGTGTaGGCTGACAGAACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMSSFWV*ADRTAA
Trigger: AGCGGCTGTTCTGTCAGCGCACACCCAGAAGGAAGA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAGCTTCTTCCGCTTGTaGTTCCCTTTCCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSSFFRL*FPFLQP
Trigger: CGGCTGCAGGAAAGGGAAGCACAAGCGGAAGAAGCT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGAAGTAATGAACGGGTaGCCCTCGCTTTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSEVMNG*PSLCAS
Trigger: GGAGGCACAAAGCGAGGGGCACCCGTTCATTACTTC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGAGCACATTCATACCGTaGAGCTGCTCTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMSTFIP*SCSLGP
Trigger: TGGACCCAAAGAGCAGCTGCACGGTATGAATGTGCT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAATTTCCTCTGCAGATaGAACTCGGGGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSNFLCR*NSGLHR
Trigger: GCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGTCTTGCTGTTCACTGTaGCTGCTGTCCGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMSCCSL*LLSANF
Trigger: GAAATTGGCGGACAGCAGCCACAGTGAACAGCAAGA...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGTTCCGATTCCAATTCTaGCTGGGCAGGGTGATGTAC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMFRFQF*LGRVMY
Trigger: GTACATCACCCTGCCCAGCCAGAATTGGAATCGGAA...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTAGGAAAAGGGAAAGCTaGGTAAGGCTGCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLARKRES*VRLQAL
Trigger: GAGGGCTTGCAGCCTTACCCAGCTTTCCCTTTTCCT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTTGTCGCCCCCAGGAATaGACATGGCAAAAACGATGG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLACRPQE*TWQKRW
Trigger: CCATCGTTTTTGCCATGTCCATTCCTGGGGGCGACA...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTCCTCCTCTCTCCTTTaGCTGGTGACTGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMSSSLL*LVTEGG
Trigger: ACCCCCTTCAGTCACCAGCCAAAGGAGAGAGGAGGA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTCCTCCTCTCTCCTTTaGCTGGTGACTGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSSSSLL*LVTEGG
Trigger: ACCCCCTTCAGTCACCAGCCAAAGGAGAGAGGAGGA...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCTGCTGAACCAGTTCTaGATGGGGATTCGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSLLNQF*MGIRWE
Trigger: CTCCCAGCGAATCCCCATCCAGAACTGGTTCAGCAG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCTGCTGAACCAGTTCTaGATGGGGATTCGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMLLNQF*MGIRWE
Trigger: CTCCCAGCGAATCCCCATCCAGAACTGGTTCAGCAG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGACCCTCTCAGGTACCTaGTATGTCATGAGAATGCGC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMTLSGT*YVMRMR
Trigger: GCGCATTCTCATGACATACCAGGTACCTGAGAGGGT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGACAACTGGGCTCGCCTaGACGTTTTCTCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMTTGLA*TFSLLQ
Trigger: CTGCAAAAGAGAAAACGTCCAGGCGAGCCCAGTTGT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGACAACTGGGCTCGCCTaGACGTTTTCTCTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMTTGLA*TFSLLQ
Trigger: CTGCAAAAGAGAAAACGTCCAGGCGAGCCCAGTTGT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGTCACTTTGCAGTCAGTaGCAGACACCGGTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQSLCSQ*QTPVSH
Trigger: GTGAGAAACCGGTGTCTGTCACTGACTGCAAAGTGA...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGAGCAGGTCAACAAAGTaGGAAGACGCCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQSRSTK*EDARTS
Trigger: AGATGTCCTGGCGTCTTCTCACTTTGTTGACCTGCT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTAGCAGGTCAACAAAGTaGGAAGACGCCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLASRSTK*EDARTS
Trigger: AGATGTCCTGGCGTCTTCTCACTTTGTTGACCTGCT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGAATACCCTCATGTCTTaGGGTGCAAGCAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMNTLMS*GASRST
Trigger: TGTTGACCTGCTTGCACCTCAAGACATGAGGGTATT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGAATCAGATAGGGGATaGTCCGGAATGGGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSESDRG*SGMGSD
Trigger: GTCACTCCCCATTCCGGATCATCCCCTATCTGATTC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCTGGACACGCTCACGTaGACTGGCTGTAAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSLDTLT*TGCKRS
Trigger: ACTTCTCTTACAGCCAGTTCACGTGAGCGTGTCCAG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCACTGTCGATACAGTTaGTCTGTTGATAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMHCRYS*SVDRMG
Trigger: GCCCATCCTATCAACAGATCAACTGTATCGACAGTG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGGCCGCACCATCAGCTaGATCTTCATTTTCACAAGT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMGRTIS*IFIFTS
Trigger: ACTTGTGAAAATGAAGATTCAGCTGATGGTGCGGCC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGAACGCCAGGTTGAATaGAGCCTGTATGAACGTACT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMERQVE*SLYERT
Trigger: AGTACGTTCATACAGGCTTCATTCAACCTGGCGTTC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTAGGGATCTACAAGGATaGAGGCCAAAACTCAACCCC +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLARDLQG*RPKLNP
Trigger: GGGGTTGAGTTTTGGCCTTCATCCTTGTAGATCCCT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGAGGAGATCTGAGCTATaGGGATGGTCATCATGGATG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMRRSEL*GWSSWM
Trigger: CATCCATGATGACCATCCTCATAGCTCAGATCTCCT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGCTGTTCACTGTGGCTaGTGTCCGCCAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSAVHCG*CPPISS
Trigger: AGAGGAAATTGGCGGACAGCAGCCACAGTGAACAGC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGACTCTGTTTCGATCTTaGTGTTCACTGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMTLFRS*CSLWLL
Trigger: CAGCAGCCACAGTGAACAGCAAGATCGAAACAGAGT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCCTCATGTCTTGAGGTaGAAGCAGGTCAACAAAGTG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMPHVLR*KQVNKV
Trigger: CACTTTGTTGACCTGCTTGCACCTCAAGACATGAGG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCCTCATGTCTTGAGGTaGAAGCAGGTCAACAAAGTG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMPHVLR*KQVNKV
Trigger: CACTTTGTTGACCTGCTTGCACCTCAAGACATGAGG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGGCTTGGACATCATCTaGCTTGTGGTTCTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMGLDII*LVVLFV
Trigger: GACAAACAGAACCACAAGGCAGATGATGTCCAAGCC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCATGGACAATGGTGCTaGTGTAACCGCATTGGCTTA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMHGQWC*CNRIGL
Trigger: TAAGCCAATGCGGTTACAGCAGCACCATTGTCCATG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGATATACTGCTGTCGCTaGTTCCTGATGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMIYCCR*FLMLLN
Trigger: GTTCAGCAGCATCAGGAAGCAGCGACAGCAGTATAT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGATGCGCTCAGGTGTCTaGCGTATCATTCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQMRSGV*RIILQM
Trigger: CATCTGGAGAATGATACGGCAGACACCTGAGCGCAT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGAACTGGGGCTGCTGCTaGCTCATACTTTCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMNWGCC*LILSSF
Trigger: AAAGCTAGAAAGTATGAGGCAGCAGCAGCCCCAGTT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCAGTCCCCACAACACTaGCCTGTTCAAGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSQSPQH*PVQGQT
Trigger: TGTTTGCCCTTGAACAGGGCAGTGTTGTGGGGACTG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTAGCACATTCATACCGTaGAGCTGCTCTTTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLASTFIP*SCSLGP
Trigger: TGGACCCAAAGAGCAGCTGCACGGTATGAATGTGCT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGTCTTGCTGTTCACTGTaGCTGCTGTCCGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQSCCSL*LLSANF
Trigger: GAAATTGGCGGACAGCAGCCACAGTGAACAGCAAGA...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGATCTGTTGATAGGATaGGCTGTGCTCATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMDLLIG*AVLIVP
Trigger: AGGAACGATGAGCACAGCCCATCCTATCAACAGATC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCCAGCTTGTAAGGCTTaGACATCATCTGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAPACKA*TSSALW
Trigger: CCACAAGGCAGATGATGTCCAAGCCTTACAAGCTGG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCTCCTCCTGTGTCTATaGACCGTCCATTTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALLLCL*TVHLLA
Trigger: TGCCAACAAATGGACGGTCCATAGACACAGGAGGAG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGACATGGCAAAAACGATaGCGACAACAGAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMTWQKR*RQQRTD
Trigger: GTCTGTCCTCTGTTGTCGCCATCGTTTTTGCCATGT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGACATGGCAAAAACGATaGCGACAACAGAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMTWQKR*RQQRTD
Trigger: GTCTGTCCTCTGTTGTCGCCATCGTTTTTGCCATGT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCCCCAGGAATGGACATaGCAAAAACGATGGCGACAA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAPQEWT*QKRWRQ
Trigger: TTGTCGCCATCGTTTTTGCCATGTCCATTCCTGGGG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGAGATTCAGAGGGTCTaGGCATCTCTTCCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMEIQRV*ASLPEV
Trigger: TACTTCAGGAAGAGATGCCCAGACCCTCTGAATCTC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCCTTCTCATCTGATCTaGAGATTCAGAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQPSHLI*RFRGSG
Trigger: CCCAGACCCTCTGAATCTCCAGATCAGATGAGAAGG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTACCCTCTCAGGTACCTaGTATGTCATGAGAATGCGC +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLATLSGT*YVMRMR
Trigger: GCGCATTCTCATGACATACCAGGTACCTGAGAGGGT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGTGCTCCATTCTGACTaGGAATCTGGAAAAACTCAC +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMVLHSD*ESGKTH
Trigger: GTGAGTTTTTCCAGATTCTCAGTCAGAATGGAGCAC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGTCTTTTCAACCACAGTaGGACAGCAAGGTTCCGATT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMSFQPQ*DSKVPI
Trigger: AATCGGAACCTTGCTGTCTCACTGTGGTTGAAAAGA...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTTCCCCGTCACTGGCTTaGATGATGATTTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLASPSLA*MMIWSL
Trigger: CAATGACCAAATCATCATTCAAGCCAGTGACGGGGA...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGTGTTCCTTCTCATCTaGTCTGGAGATTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQVFLLI*SGDSEG
Trigger: ACCCTCTGAATCTCCAGATCAGATGAGAAGGAACAC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGTGTTCCTTCTCATCTaGTCTGGAGATTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAVFLLI*SGDSEG
Trigger: ACCCTCTGAATCTCCAGATCAGATGAGAAGGAACAC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGTTTTTCTGTACGTCCTaGGATTGCTGCCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMFFCTS*DCCPFW
Trigger: CCAAAATGGGCAGCAATCTCAGGACGTACAGAAAAA...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGTGTCGATTTCTTGAGTaGCAGTCTGGCTTTGAATCC +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMCRFLE*QSGFES
Trigger: GGATTCAAAGCCAGACTGTCACTCAAGAAATCGACA...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGGCCGCACCATCAGCTaGATCTTCATTTTCACAAGT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAGRTIS*IFIFTS
Trigger: ACTTGTGAAAATGAAGATTCAGCTGATGGTGCGGCC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGTCTTGGAAAGGGTATaGAGGTTCATCCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQVLERV*RFILTV
Trigger: GACTGTGAGGATGAACCTTCATACCCTTTCCAAGAC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGAGGGATCTACAAGGATaGAGGCCAAAACTCAACCCC +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMRDLQG*RPKLNP
Trigger: GGGGTTGAGTTTTGGCCTTCATCCTTGTAGATCCCT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAGGGATCTACAAGGATaGAGGCCAAAACTCAACCCC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSRDLQG*RPKLNP
Trigger: GGGGTTGAGTTTTGGCCTTCATCCTTGTAGATCCCT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTACTACAGAAGGTCACTaGCAGACAATCTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLATTEGH*QTIYWL
Trigger: CAGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTTTGCCTGTAACACACTaGTACTCAGTTTGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALPVTH*YSVCGH
Trigger: GTGCCCACAAACTGAGTATCAGTGTGTTACAGGCAA...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613533.4
CDS-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGTGCTTGGTTTATTaGGTCTCTCCGAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMECLVY*VSPRGS
Trigger: ACTTCCCCTCGGAGAGACGCAATAAACCAAGCACTC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCCTCAAGACTGTACATaGTCACATCTGCCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSPQDCT*SHLPEV
Trigger: CACCTCAGGCAGATGTGAGCATGTACAGTCTTGAGG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGCCTGTTCAGAAATGTaGACTAACCTTCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMACSEM*TNLPDR
Trigger: TCTGTCTGGAAGGTTAGTGCACATTTCTGAACAGGC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGCCTGTTCAGAAATGTaGACTAACCTTCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMACSEM*TNLPDR
Trigger: TCTGTCTGGAAGGTTAGTGCACATTTCTGAACAGGC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCCTCATGTCTTGAGGTaGAAGCAGGTCAACAAAGTG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAPHVLR*KQVNKV
Trigger: CACTTTGTTGACCTGCTTGCACCTCAAGACATGAGG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGAGCACATTCATACCGTaGAGCTCTTTGGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQSTFIP*SSLGPV
Trigger: AACTGGACCCAAAGAGCTGCACGGTATGAATGTGCT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361923.2
CDS-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGATGCGCTCAGGTGTCTaGCGTATCATTCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMMRSGV*RIILQM
Trigger: CATCTGGAGAATGATACGGCAGACACCTGAGCGCAT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTAACTGGGGCTGCTGCTaGCTCATACTTTCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLANWGCC*LILSSF
Trigger: AAAGCTAGAAAGTATGAGGCAGCAGCAGCCCCAGTT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGAAGGAAGCTGAGCTCTaGCAGTGTGCGCGTAGAATA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMKEAEL*QCARRI
Trigger: TATTCTACGCGCACACTGCCAGAGCTCAGCTTCCTT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTTCCGATTCCAATTCTaGCTGGGCAGGGTGATGTAC +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMFRFQF*LGRVMY
Trigger: GTACATCACCCTGCCCAGCCAGAATTGGAATCGGAA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGAGGGATTCACAAAGCTaGACCAACTGGAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMRDSQS*TNWNPV
Trigger: TACTGGATTCCAGTTGGTCCAGCTTTGTGAATCCCT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGATCTGTTGATAGGATaGGCTGTGCTCATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQDLLIG*AVLIVP
Trigger: AGGAACGATGAGCACAGCCCATCCTATCAACAGATC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGATCTGTTGATAGGATaGGCTGTGCTCATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLADLLIG*AVLIVP
Trigger: AGGAACGATGAGCACAGCCCATCCTATCAACAGATC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCCAGCTTGTAAGGCTTaGACATCATCTGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSPACKA*TSSALW
Trigger: CCACAAGGCAGATGATGTCCAAGCCTTACAAGCTGG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCTCCTCCTGTGTCTATaGACCGTCCATTTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSLLLCL*TVHLLA
Trigger: TGCCAACAAATGGACGGTCCATAGACACAGGAGGAG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTTCTGCTCTTCCTTCTaGGTGTGCGCTGACAGAACA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMFCSSF*VCADRT
Trigger: TGTTCTGTCAGCGCACACCCAGAAGGAAGAGCAGAA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTTCTGCTCTTCCTTCTaGGTGTGCGCTGACAGAACA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSFCSSF*VCADRT
Trigger: TGTTCTGTCAGCGCACACCCAGAAGGAAGAGCAGAA...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCCCCAGGAATGGACATaGCAAAAACGATGGCGACAA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMPQEWT*QKRWRQ
Trigger: TTGTCGCCATCGTTTTTGCCATGTCCATTCCTGGGG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCCTTCTCATCTGATCTaGAGATTCAGAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMPSHLI*RFRGSG
Trigger: CCCAGACCCTCTGAATCTCCAGATCAGATGAGAAGG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCTGATACTCAGTTTGTaGGCACGTGTTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMLILSL*ARVPSH
Trigger: ATGAGAAGGAACACGTGCCCACAAACTGAGTATCAG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613533.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGTGCTCCATTCTGACTaGGAATCTGGAAAAACTCAC +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAVLHSD*ESGKTH
Trigger: GTGAGTTTTTCCAGATTCTCAGTCAGAATGGAGCAC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGAATACCCTCATGTCTTaGGGTGCAAGCAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMNTLMS*GASRST
Trigger: TGTTGACCTGCTTGCACCTCAAGACATGAGGGTATT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGTCTTTTCAACCACAGTaGGACAGCAAGGTTCCGATT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQSFQPQ*DSKVPI
Trigger: AATCGGAACCTTGCTGTCTCACTGTGGTTGAAAAGA...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGAACTGGAATCCAGTATaGTGTAGTCTCCGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMNWNPV*CSLRFE
Trigger: CTCAAAACGGAGACTACATCATACTGGATTCCAGTT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGAACTGGAATCCAGTATaGTGTAGTCTCCGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMNWNPV*CSLRFE
Trigger: CTCAAAACGGAGACTACATCATACTGGATTCCAGTT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTCCCCGTCACTGGCTTaGATGATGATTTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMSPSLA*MMIWSL
Trigger: CAATGACCAAATCATCATTCAAGCCAGTGACGGGGA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCACTGTCGATACAGTTaGTCTGTTGATAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMHCRYS*SVDRMG
Trigger: GCCCATCCTATCAACAGATCAACTGTATCGACAGTG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGTTTTTCTGTACGTCCTaGGATTGCTGCCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQFFCTS*DCCPFW
Trigger: CCAAAATGGGCAGCAATCTCAGGACGTACAGAAAAA...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGGCCGCACCATCAGCTaGATCTTCATTTTCACAAGT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSGRTIS*IFIFTS
Trigger: ACTTGTGAAAATGAAGATTCAGCTGATGGTGCGGCC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGTCTTGGAAAGGGTATaGAGGTTCATCCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSVLERV*RFILTV
Trigger: GACTGTGAGGATGAACCTTCATACCCTTTCCAAGAC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAACGCCAGGTTGAATaGAGCCTGTATGAACGTACT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMERQVE*SLYERT
Trigger: AGTACGTTCATACAGGCTTCATTCAACCTGGCGTTC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGACTACAGAAGGTCACTaGCAGACAATCTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMTTEGH*QTIYWL
Trigger: CAGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTACTCTGTTTCGATCTTaGTGTTCACTGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSTLFRS*CSLWLL
Trigger: CAGCAGCCACAGTGAACAGCAAGATCGAAACAGAGT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGAAAAACTCACTGTTTaGTTGAACGCTGTGGACACA +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMEKLTV*LNAVDT
Trigger: TGTGTCCACAGCGTTCAAGCAAACAGTGAGTTTTTC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGCCTGTTCAGAAATGTaGACTAACCTTCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAACSEM*TNLPDR
Trigger: TCTGTCTGGAAGGTTAGTGCACATTTCTGAACAGGC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGACCCAGCAAAGGCACTaGTTTTTCATCTACTTCAAG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMTQQRH*FFIYFK
Trigger: CTTGAAGTAGATGAAAAAGCAGTGCCTTTGCTGGGT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGACCCAGCAAAGGCACTaGTTTTTCATCTACTTCAAG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMTQQRH*FFIYFK
Trigger: CTTGAAGTAGATGAAAAAGCAGTGCCTTTGCTGGGT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCATGGACAATGGTGCTaGTGTAACCGCATTGGCTTA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSHGQWC*CNRIGL
Trigger: TAAGCCAATGCGGTTACAGCAGCACCATTGTCCATG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTATATACTGCTGTCGCTaGTTCCTGATGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSIYCCR*FLMLLN
Trigger: GTTCAGCAGCATCAGGAAGCAGCGACAGCAGTATAT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAACTGGGGCTGCTGCTaGCTCATACTTTCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSNWGCC*LILSSF
Trigger: AAAGCTAGAAAGTATGAGGCAGCAGCAGCCCCAGTT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTACCGTGCAGCTCTTTaGGTCCAGTTGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMYRAAL*VQLFQK
Trigger: TTTCTGGAACAACTGGACCCAAAGAGCTGCACGGTA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361923.2
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGAGGGATTCACAAAGCTaGACCAACTGGAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQRDSQS*TNWNPV
Trigger: TACTGGATTCCAGTTGGTCCAGCTTTGTGAATCCCT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGACATGGCAAAAACGATaGCGACAACAGAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMTWQKR*RQQRTD
Trigger: GTCTGTCCTCTGTTGTCGCCATCGTTTTTGCCATGT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGATTCAGAGGGTCTaGGCATCTCTTCCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMEIQRV*ASLPEV
Trigger: TACTTCAGGAAGAGATGCCCAGACCCTCTGAATCTC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGAGATTCAGAGGGTCTaGGCATCTCTTCCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSEIQRV*ASLPEV
Trigger: TACTTCAGGAAGAGATGCCCAGACCCTCTGAATCTC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGTACACAACCTGTAGGTaGCATTTCTTCAAGCACTCT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMYTTCR*HFFKHS
Trigger: AGAGTGCTTGAAGAAATGCCACCTACAGGTTGTGTA...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGAAAGGGCAACAGCACTaGGTAAGAAGCTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMKGQQH*VRSSFI
Trigger: AATGAAAGAGCTTCTTACCCAGTGCTGTTGCCCTTT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
3UTR CAA 72 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTaGAATGAAGCCTGTATGAACGTACTACATTCATGG +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNAR*NEACMNVLHSW
Trigger: CCATGAATGTAGTACGTTCATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.7
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGTGCTCCATTCTGACTaGGAATCTGGAAAAACTCAC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSVLHSD*ESGKTH
Trigger: GTGAGTTTTTCCAGATTCTCAGTCAGAATGGAGCAC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTCTTTTCAACCACAGTaGGACAGCAAGGTTCCGATT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSSFQPQ*DSKVPI
Trigger: AATCGGAACCTTGCTGTCTCACTGTGGTTGAAAAGA...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGATTTGTTGGCATTTCTaGTTTAGGTATGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMICWHF*FRYGWD
Trigger: ATCCCAGCCATACCTAAATCAGAAATGCCAACAAAT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTTTTTCTGTACGTCCTaGGATTGCTGCCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMFFCTS*DCCPFW
Trigger: CCAAAATGGGCAGCAATCTCAGGACGTACAGAAAAA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGTGACAGTCTGGCTTTaGATCCAATTATACACCTTA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMVTVWL*IQLYTL
Trigger: TAAGGTGTATAATTGGATTCAAAGCCAGACTGTCAC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGTCGATTTCTTGAGTaGCAGTCTGGCTTTGAATCC +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSCRFLE*QSGFES
Trigger: GGATTCAAAGCCAGACTGTCACTCAAGAAATCGACA...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTGTCGATTTCTTGAGTaGCAGTCTGGCTTTGAATCC +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMCRFLE*QSGFES
Trigger: GGATTCAAAGCCAGACTGTCACTCAAGAAATCGACA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCTTCATTTTCACAAGTaGCACAGGCTTGAATGTCGA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALHFHK*HRLECR
Trigger: TCGACATTCAAGCCTGTGTCACTTGTGAAAATGAAG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCTTCATTTTCACAAGTaGCACAGGCTTGAATGTCGA +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQLHFHK*HRLECR
Trigger: TCGACATTCAAGCCTGTGTCACTTGTGAAAATGAAG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGTGTGCTAATGTGTTGTaGGAAAACCGGAATGTTTCA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMCANVL*ENRNVS
Trigger: TGAAACATTCCGGTTTTCTCACAACACATTAGCACA...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGAAAAACTCACTGTTTaGTTGAACGCTGTGGACACA +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQEKLTV*LNAVDT
Trigger: TGTGTCCACAGCGTTCAAGCAAACAGTGAGTTTTTC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGTGTTCAAAGGGAGGATaGCCTGCATACTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQCSKGG*PAYFKT
Trigger: AGTTTTGAAGTATGCAGGGCATCCTCCCTTTGAACA...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCTCGTTCGAACTTTATaGCGACCAATGATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMLVRTL*RPMMKE
Trigger: TTCTTTCATCATTGGTCGGCATAAAGTTCGAACGAG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGAGTACAAAATCGAATaGGAGAATGTTCAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMEYKIE*ENVQRE
Trigger: CTCCCTTTGAACATTCTCCCATTCGATTTTGTACTC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGAGGGATTCACAAAGCTaGACCAACTGGAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMRDSQS*TNWNPV
Trigger: TACTGGATTCCAGTTGGTCCAGCTTTGTGAATCCCT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGACAATACTCAGTTTGTaGGCACGTGTTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQTILSL*ARVPSH
Trigger: ATGAGAAGGAACACGTGCCCACAAACTGAGTATTGT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361923.2
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGTCTGACACCTTAAGATaGAATTACCATCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMSDTLR*NYHPES
Trigger: GCTTTCTGGATGGTAATTCCATCTTAAGGTGTCAGA...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTATTTGTTGGCATTTCTaGTTTAGGTATGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAICWHF*FRYGWD
Trigger: ATCCCAGCCATACCTAAATCAGAAATGCCAACAAAT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGATTTGTTGGCATTTCTaGTTTAGGTATGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQICWHF*FRYGWD
Trigger: ATCCCAGCCATACCTAAATCAGAAATGCCAACAAAT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGACTCTGGGTGACATCTaGAATAAAGATACACATACC +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQTLGDI*NKDTHT
Trigger: GGTATGTGTATCTTTATTTCAGATGTCACCCAGAGT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGAAAAACTCACTGTTTaGTTGAACGCTGTGGACACA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSEKLTV*LNAVDT
Trigger: TGTGTCCACAGCGTTCAAGCAAACAGTGAGTTTTTC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTAAAGGGAGGATGCCCTaGATACTTCAAAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAKGRMP*ILQNFL
Trigger: CAAAAAGTTTTGAAGTATGCAGGGCATCCTCCCTTT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGAAAGGGAGGATGCCCTaGATACTTCAAAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQKGRMP*ILQNFL
Trigger: CAAAAAGTTTTGAAGTATGCAGGGCATCCTCCCTTT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGTTCAAAGGGAGGATaGCCTGCATACTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSCSKGG*PAYFKT
Trigger: AGTTTTGAAGTATGCAGGGCATCCTCCCTTTGAACA...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCTCGTTCGAACTTTATaGCGACCAATGATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALVRTL*RPMMKE
Trigger: TTCTTTCATCATTGGTCGGCATAAAGTTCGAACGAG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGATTCTTTTATTCACTaGGATCCGAGGAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQDSFIH*DPRSFI
Trigger: TATGAAGCTCCTCGGATCCCAGTGAATAAAAGAATC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGAAACTTTTTGGTGTATaGCAACCATCAGAGAACGAT +
Preference number: 4 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMKLFGV*QPSEND
Trigger: ATCGTTCTCTGATGGTTGCCATACACCAAAAAGTTT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGAGTACAAAATCGAATaGGAGAATGTTCAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQEYKIE*ENVQRE
Trigger: CTCCCTTTGAACATTCTCCCATTCGATTTTGTACTC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCTGTGTAACACGTCTTaGAAAGGGTATGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSLCNTS*KGYEGS
Trigger: TGAACCTTCATACCCTTTCCAAGACGTGTTACACAG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAAAGGGCAACAGCACTaGGTAAGAAGCTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSKGQQH*VRSSFI
Trigger: AATGAAAGAGCTTCTTACCCAGTGCTGTTGCCCTTT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTTCTGACACCTTAAGATaGAATTACCATCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLASDTLR*NYHPES
Trigger: GCTTTCTGGATGGTAATTCCATCTTAAGGTGTCAGA...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGTGACAGTCTGGCTTTaGATCCAATTATACACCTTA +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMVTVWL*IQLYTL
Trigger: TAAGGTGTATAATTGGATTCAAAGCCAGACTGTCAC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGACTCTGGGTGACATCTaGAATAAAGATACACATACC +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMTLGDI*NKDTHT
Trigger: GGTATGTGTATCTTTATTTCAGATGTCACCCAGAGT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCACTGTGAATTACAATaGAGTGTCACTCAATTGCAA +
Preference number: 4 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQHCELQ*SVTQLQ
Trigger: TTGCAATTGAGTGACACTTCATTGTAATTCACAGTG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAAAGGGAGGATGCCCTaGATACTTCAAAACTTTTTG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSKGRMP*ILQNFL
Trigger: CAAAAAGTTTTGAAGTATGCAGGGCATCCTCCCTTT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCTCGTTCGAACTTTATaGCGACCAATGATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSLVRTL*RPMMKE
Trigger: TTCTTTCATCATTGGTCGGCATAAAGTTCGAACGAG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCTTAGCATATATGAGTaGGCAATGATCCTGATAGCT +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMLSIYE*AMILIA
Trigger: AGCTATCAGGATCATTGCGCACTCATATATGCTAAG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR GCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCTTAGCATATATGAGTaGGCAATGATCCTGATAGCT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSLSIYE*AMILIA
Trigger: AGCTATCAGGATCATTGCGCACTCATATATGCTAAG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGATTCTTTTATTCACTaGGATCCGAGGAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSDSFIH*DPRSFI
Trigger: TATGAAGCTCCTCGGATCCCAGTGAATAAAAGAATC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTAAACTTTTTGGTGTATaGCAACCATCAGAGAACGAT +
Preference number: 4 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAKLFGV*QPSEND
Trigger: ATCGTTCTCTGATGGTTGCCATACACCAAAAAGTTT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGTACTTCAAAACTTTTTaGTGTATGGCAACCATCAGA +
Preference number: 4 (lower is better)
Translates to: ECFILIMEGNARLNEACMYFKTF*CMATIR
Trigger: TCTGATGGTTGCCATACACCAAAAAGTTTTGAAGTA...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGAGTACAAAATCGAATaGGAGAATGTTCAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSEYKIE*ENVQRE
Trigger: CTCCCTTTGAACATTCTCCCATTCGATTTTGTACTC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTACATCATCTGCCTTGTaGTTCTGTTTGTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSTSSAL*FCLSSS
Trigger: AGAAGAAGACAAACAGAACCACAAGGCAGATGATGT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGAATTTCACTGGAAGGTaGGAAATCAATAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMNFTGR*EINRKG
Trigger: CCCTTTCCTATTGATTTCCCACCTTCCAGTGAAATT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAATTTCACTGGAAGGTaGGAAATCAATAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSNFTGR*EINRKG
Trigger: CCCTTTCCTATTGATTTCCCACCTTCCAGTGAAATT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR TCA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCACTGTGAATTACAATaGAGTGTCACTCAATTGCAA +
Preference number: 4 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSHCELQ*SVTQLQ
Trigger: TTGCAATTGAGTGACACTTCATTGTAATTCACAGTG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS CCA 90 bp AGCTGGGACGAGGTAAGGGGCCTGGCTGGGCACCATGGCGGCAGGTaGGAAGGTCGGGCTCGAGGTGTGCGGAGAGGAGGCCGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: SWDEVRGLAGHHGGR*EGRARGVRRGGRGG
Trigger: CCCTCCGCGGCCTCCTCTCCGCACACCTCGAGCCCGACCTTCCCACCTGCCGCCATGGTGCCCAGCCAGGCCCCTTACCTCGTCCCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS GCA 90 bp CGTTCTGATGCGCTCCCCTGCGGGGACCAGAGCCGGTGTTCGAGCTaGTGCTGTCTGGCGGCTCCGGCAGCTTCTTCCGCTTGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RSDALPCGDQSRCSS*CCLAAPAASSACAS
Trigger: GGAAGCACAAGCGGAAGAAGCTGCCGGAGCCGCCAGACAGCAGCAGCTCGAACACCGGCTCTGGTCCCCGCAGGGGAGCGCATCAGAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CCA 90 bp CGCTCCCCTGCGGGGACCAGAGCCGGTGTTCGAGCTGCTGCTGTCTaGCGGCTCCGGCAGCTTCTTCCGCTTGTGCTTCCCTTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: RSPAGTRAGVRAAAV*RLRQLLPLVLPFPA
Trigger: TGCAGGAAAGGGAAGCACAAGCGGAAGAAGCTGCCGGAGCCGCCAGACAGCAGCAGCTCGAACACCGGCTCTGGTCCCCGCAGGGGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS GCA 90 bp TCTGATGCGCTCCCCTGCGGGGACCAGAGCCGGTGTTCGAGCTGCTaGTGTCTGGCGGCTCCGGCAGCTTCTTCCGCTTGTGCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: SDALPCGDQSRCSSC*CLAAPAASSACASL
Trigger: AAGGGAAGCACAAGCGGAAGAAGCTGCCGGAGCCGCCAGACAGCAGCAGCTCGAACACCGGCTCTGGTCCCCGCAGGGGAGCGCATCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS GCA 90 bp GAGGTCTCCGCGGGGCTCCACGTCGTGCTGGGACGGCCCGCAGCCTaGTTCTCGCTCACTTTGCAGTCAGTGACAGACACCGGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: EVSAGLHVVLGRPAA*FSLTLQSVTDTGFS
Trigger: TGAGAAACCGGTGTCTGTCACTGACTGCAAAGTGAGCGAGAAGCAGGCTGCGGGCCGTCCCAGCACGACGTGGAGCCCCGCGGAGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCGGGTGCCCCTCGCTTaGTGCCTCCCACTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: SRCNLGVRECVHPQEERSRVPLA*CLPLFL
Trigger: GAGGAAAAGTGGGAGGCACAAAGCGAGGGGCACCCG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS GCA 90 bp ACCTGCTGCAAGGTCATCTGCTCCGCCTTCGTCTCCTCCACACGGTaGCCACTGGCCTCACTGGAGGAGGCGATGCTGACAAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TCCKVICSAFVSSTR*PLASLEEAMLTSCS
Trigger: GGAGCAGCTTGTCAGCATCGCCTCCTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGAGACGAAGGCGGAGCAGATGACCTTGCAGCAGGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS GCA 90 bp GACATAAGCCCATGCACCTGCTCCGCCTTCGTCTCCTCCACACGGTaGCCACTGGCCTCACTGGAGGAGGCGATGCTGACAAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: DISPCTCSAFVSSTR*PLASLEEAMLTSCS
Trigger: GGAGCAGCTTGTCAGCATCGCCTCCTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGAGACGAAGGCGGAGCAGGTGCATGGGCTTATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463106.1
CDS TCA 90 bp TGCTGGGACGGCCCGCAGCCTGCTTCTCGCTCACTTTGCAGTCAGTaGCAGACACCGGTTTCTCACTCCGGTCCCCGCCATGGCGTTAGT +
Preference number: 5 (lower is better)
Translates to: CWDGPQPASRSLCSQ*QTPVSHSGPRHGVS
Trigger: ACTAACGCCATGGCGGGGACCGGAGTGAGAAACCGGTGTCTGTCACTGACTGCAAAGTGAGCGAGAAGCAGGCTGCGGGCCGTCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000613533.4
ENST00000614998.4
CDS CCA 90 bp TCTTGCTGTTCACTGTGGCTGCTGTCCGCCAATTTCCTCTGCAGATaGAACTCGGGGCTCCACCGCTCCCCCGATTCTTCGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SCCSLWLLSANFLCR*NSGLHRSPDSSPRA
Trigger: GGCCCTGGGCGAAGAATCGGGGGAGCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCGGACAGCAGCCACAGTGAACAGCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCGCTGCTGTAACCGCATaGGCTTATGCCCGACCCCAA +
Preference number: 5 (lower is better)
Translates to: SRCNLGVRECVHPQEERSAAVTA*AYARPQ
Trigger: TTGGGGTCGGGCATAAGCCAATGCGGTTACAGCAGC...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCAGCCAGCTCCTCCTTTaGCCCATGAGAAAACTGGGG +
Preference number: 5 (lower is better)
Translates to: SRCNLGVRECVHPQEERSSQLLL*PMRKLG
Trigger: CCCCAGTTTTCTCATGGGCAAAAGGAGGAGCTGGCT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCCGTGCAGCTGCTCTTaGGGTCCAGTTGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: SRCNLGVRECVHPQEERSPCSCS*GPVVPE
Trigger: TTCTGGAACAACTGGACCCAAAGAGCAGCTGCACGG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTGCTTCTCGCTCACTTaGCAGTCAGTGACAGACACC +
Preference number: 5 (lower is better)
Translates to: SRCNLGVRECVHPQEERSCFSLT*QSVTDT
Trigger: GGTGTCTGTCACTGACTGCAAAGTGAGCGAGAAGCA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS GCA 90 bp TTTCGATCTTGCTGTTCACTGTGGCTGCTGTCCGCCAATTTCCTCTaGAGATGGAACTCGGGGCTCCACCGCTCCCCCGATTCTTCGCCC +
Preference number: 5 (lower is better)
Translates to: FRSCCSLWLLSANFL*RWNSGLHRSPDSSP
Trigger: GGGCGAAGAATCGGGGGAGCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCGGACAGCAGCCACAGTGAACAGCAAGATCGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000613533.4
ENST00000614998.4
CDS CCA 90 bp TGTAACCGCATTGGCTTATGCCCGACCCCAAGCTCAGCATCGCCGTaGACAGGATCTGTGGAGCTCCTCCTCCTGTGTCTATGGACCGTC +
Preference number: 5 (lower is better)
Translates to: CNRIGLCPTPSSASP*TGSVELLLLCLWTV
Trigger: GACGGTCCATAGACACAGGAGGAGGAGCTCCACAGATCCTGTCCACGGCGATGCTGAGCTTGGGGTCGGGCATAAGCCAATGCGGTTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCCTGTACGTCCTGAGATaGCTGCCCATTTTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: SRCNLGVRECVHPQEERSLYVLR*LPILGD
Trigger: ATCTCCCAAAATGGGCAGCAATCTCAGGACGTACAG...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTGGACGTTTTCTCTTTaGCAGTCCCCACAACACTGC +
Preference number: 5 (lower is better)
Translates to: SRCNLGVRECVHPQEERSWTFSL*QSPQHC
Trigger: GCAGTGTTGTGGGGACTGCAAAAGAGAAAACGTCCA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS CCA 90 bp GCTTATGCCCGACCCCAAGCTCAGCATCGCCGTGGACAGGATCTGTaGAGCTCCTCCTCCTGTGTCTATGGACCGTCCATTTGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: AYARPQAQHRRGQDL*SSSSCVYGPSICWH
Trigger: ATGCCAACAAATGGACGGTCCATAGACACAGGAGGAGGAGCTCCACAGATCCTGTCCACGGCGATGCTGAGCTTGGGGTCGGGCATAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCAACTCTGTTTCGATCTaGCTGTTCACTGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SRCNLGVRECVHPQEERSNSVSI*LFTVAA
Trigger: AGCAGCCACAGTGAACAGCAAGATCGAAACAGAGTT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS CCA 90 bp CGCTGTGAGCCCCACGTGTTTAAATTCTTCCGAGGTCAAAGGGGCTaGCTGCATGTTCAGGGTCCAGGGCTCACAGAAGAGGGTAGCATC +
Preference number: 5 (lower is better)
Translates to: RCEPHVFKFFRGQRG*LHVQGPGLTEEGSI
Trigger: GATGCTACCCTCTTCTGTGAGCCCTGGACCCTGAACATGCAGCCAGCCCCTTTGACCTCGGAAGAATTTAAACACGTGGGGCTCACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCTGGACATCATCTGCCTaGTGGTTCTGTTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SRCNLGVRECVHPQEERSWTSSA*WFCLSS
Trigger: AGAAGACAAACAGAACCACAAGGCAGATGATGTCCA...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCACAAGTGACACAGGCTaGAATGTCGATTTCTTGAGT +
Preference number: 5 (lower is better)
Translates to: SRCNLGVRECVHPQEERSTSDTG*NVDFLS
Trigger: ACTCAAGAAATCGACATTCAAGCCTGTGTCACTTGT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AGCAGGTGCAACCTGGGAGTGCGTGAATGCGTCCACCCACAGGAGGAGCGCTCCAGGAAGAAGTTGTATTaGTACAGGAGATACACTTTC +
Preference number: 5 (lower is better)
Translates to: SRCNLGVRECVHPQEERSRKKLY*YRRYTF
Trigger: GAAAGTGTATCTCCTGTACAAATACAACTTCTTCCT...GGAGCGCTCCTCCTGTGGGTGGACGCATTCACGCACTCCCAGGTTGCACCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS TCA 90 bp ACTCACCACCACCATTCGGTTCTGTGCGTGTCCCCGTCACTGGCTTaGATGATGATTTGGTCATTGACTCAATGTAGAGCTGCTGACCCA +
Preference number: 5 (lower is better)
Translates to: THHHHSVLCVSPSLA*MMIWSLTQCRAADP
Trigger: TGGGTCAGCAGCTCTACATTGAGTCAATGACCAAATCATCATTCAAGCCAGTGACGGGGACACGCACAGAACCGAATGGTGGTGGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS GCA 90 bp CTGAGCTCTGGCAGTGTGCGCGTAGAATACCCTCATGTCTTGAGGTaGAAGCAGGTCAACAAAGTGAGAAGACGCCAGGACATCTTTCTT +
Preference number: 5 (lower is better)
Translates to: LSSGSVRVEYPHVLR*KQVNKVRRRQDIFL
Trigger: AAGAAAGATGTCCTGGCGTCTTCTCACTTTGTTGACCTGCTTGCACCTCAAGACATGAGGGTATTCTACGCGCACACTGCCAGAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000473653.1
ENST00000602883.1
ENST00000613533.4
ENST00000614998.4
CDS GCA 90 bp ACCCTCTCAGGTACCTGGTATGTCATGAGAATGCGCTCAGGTGTCTaGCGTATCATTCTCCAGATGGGCTCTTCGGCGACATTAGGAAAT +
Preference number: 5 (lower is better)
Translates to: TLSGTWYVMRMRSGV*RIILQMGSSATLGN
Trigger: ATTTCCTAATGTCGCCGAAGAGCCCATCTGGAGAATGATACGGCAGACACCTGAGCGCATTCTCATGACATACCAGGTACCTGAGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CCA 90 bp TGTTACCTCTTTGGGTCCAGTTGTTCCAGAAAGGAAGCTGAGCTCTaGCAGTGTGCGCGTAGAATACCCTCATGTCTTGAGGTGCAAGCA +
Preference number: 5 (lower is better)
Translates to: CYLFGSSCSRKEAEL*QCARRIPSCLEVQA
Trigger: TGCTTGCACCTCAAGACATGAGGGTATTCTACGCGCACACTGCCAGAGCTCAGCTTCCTTTCTGGAACAACTGGACCCAAAGAGGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473653.1
ENST00000602883.1
CDS TCA 90 bp CCAATTCTGGCTGGGCAGGGTGATGTACATGAATCAGATAGGGGATaGTCCGGAATGGGGAGTGACACTTCTCTTGCTTTCTGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PILAGQGDVHESDRG*SGMGSDTSLAFCLH
Trigger: GTGAAGACAGAAAGCAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCCTATCTGATTCATGTACATCACCCTGCCCAGCCAGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000613533.4
ENST00000614998.4
CDS TCA 90 bp ATTCACCACCACCATTCGGTTCTGTGCGTGTCCCCGTCACTGGCTTaGATGATGATTTGGTCATTGACTCAATGTAGAGCTGCTGACCCA +
Preference number: 5 (lower is better)
Translates to: IHHHHSVLCVSPSLA*MMIWSLTQCRAADP
Trigger: TGGGTCAGCAGCTCTACATTGAGTCAATGACCAAATCATCATTCAAGCCAGTGACGGGGACACGCACAGAACCGAATGGTGGTGGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361923.2
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCGGGTGCCCCTCGCTTaGTGCCTCCCACTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLARVPLA*CLPLFL
Trigger: GAGGAAAAGTGGGAGGCACAAAGCGAGGGGCACCCG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS GCA 90 bp AGTGGCCAGCTCCTCAAGACTGTACATGCTCACATCTGCCTGAGGTaGTCCATTCTGACTGAGAATCTGGAAAAACTCACTGTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: SGQLLKTVHAHICLR*SILTENLEKLTVCL
Trigger: CAAGCAAACAGTGAGTTTTTCCAGATTCTCAGTCAGAATGGAGCACCTCAGGCAGATGTGAGCATGTACAGTCTTGAGGAGCTGGCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000473653.1
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGGGGTGGGTCCAGAGTaGGACTCATTGCTGACGACA +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMGVGPE*DSLLTT
Trigger: TGTCGTCAGCAATGAGTCCAACTCTGGACCCACCCC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGGGGTGGGTCCAGAGTaGGACTCATTGCTGACGACA +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMGVGPE*DSLLTT
Trigger: TGTCGTCAGCAATGAGTCCAACTCTGGACCCACCCC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGCGGGTGCCCCTCGCTTaGTGCCTCCCACTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMRVPLA*CLPLFL
Trigger: GAGGAAAAGTGGGAGGCACAAAGCGAGGGGCACCCG...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS CCA 90 bp CAGGTATCTGATGACACTGTCGATACAGTTGATCTGTTGATAGGATaGGCTGTGCTCATCGTTCCTCAAATCCTCACAGGGCTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: QVSDDTVDTVDLLIG*AVLIVPQILTGLSV
Trigger: TACACTGAGCCCTGTGAGGATTTGAGGAACGATGAGCACAGCCCATCCTATCAACAGATCAACTGTATCGACAGTGTCATCAGATACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGCTGCTGTAACCGCATaGGCTTATGCCCGACCCCAA +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQAAVTA*AYARPQ
Trigger: TTGGGGTCGGGCATAAGCCAATGCGGTTACAGCAGC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGCTGCTGTAACCGCATaGGCTTATGCCCGACCCCAA +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAAAVTA*AYARPQ
Trigger: TTGGGGTCGGGCATAAGCCAATGCGGTTACAGCAGC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGAGCCAGCTCCTCCTTTaGCCCATGAGAAAACTGGGG +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMSQLLL*PMRKLG
Trigger: CCCCAGTTTTCTCATGGGCAAAAGGAGGAGCTGGCT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGAGCCAGCTCCTCCTTTaGCCCATGAGAAAACTGGGG +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMSQLLL*PMRKLG
Trigger: CCCCAGTTTTCTCATGGGCAAAAGGAGGAGCTGGCT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCCGTGCAGCTGCTCTTaGGGTCCAGTTGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMPCSCS*GPVVPE
Trigger: TTCTGGAACAACTGGACCCAAAGAGCAGCTGCACGG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGAGAGTGCTTGGTTTATaGCGTCTCTCCGAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMRVLGL*RLSEGK
Trigger: CTTCCCCTCGGAGAGACGCAATAAACCAAGCACTCT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGGGCATCTAGAGTGCTaGGTTTATTGCGTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMGHLEC*VYCVSP
Trigger: CGGAGAGACGCAATAAACCAAGCACTCTAGATGCCC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCCAGAGTTGGACTCATaGCTGACGACATTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMPELDS*LTTLRV
Trigger: CACCCTCAATGTCGTCAGCAATGAGTCCAACTCTGG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGGGGTGGGTCCAGAGTaGGACTCATTGCTGACGACA +
Preference number: 5 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSGVGPE*DSLLTT
Trigger: TGTCGTCAGCAATGAGTCCAACTCTGGACCCACCCC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGAGGGGAACGCCAGGTaGAATGAAGCCTGTATGAAC +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMEGNAR*NEACMN
Trigger: GTTCATACAGGCTTCATTCAACCTGGCGTTCCCCTC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCCAGAGTTGGACTCATaGCTGACGACATTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQPELDS*LTTLRV
Trigger: CACCCTCAATGTCGTCAGCAATGAGTCCAACTCTGG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCTGTACGTCCTGAGATaGCTGCCCATTTTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMLYVLR*LPILGD
Trigger: ATCTCCCAAAATGGGCAGCAATCTCAGGACGTACAG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGTGGACGTTTTCTCTTTaGCAGTCCCCACAACACTGC +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMWTFSL*QSPQHC
Trigger: GCAGTGTTGTGGGGACTGCAAAAGAGAAAACGTCCA...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTGCTTCTCGCTCACTTaGCAGTCAGTGACAGACACC +
Preference number: 5 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMCFSLT*QSVTDT
Trigger: GGTGTCTGTCACTGACTGCAAAGTGAGCGAGAAGCA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGAACTCTGTTTCGATCTaGCTGTTCACTGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMNSVSI*LFTVAA
Trigger: AGCAGCCACAGTGAACAGCAAGATCGAAACAGAGTT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGAGAGTGCTTGGTTTATaGCGTCTCTCCGAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMRVLGL*RLSEGK
Trigger: CTTCCCCTCGGAGAGACGCAATAAACCAAGCACTCT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGAAACTCACTGTTTGCTaGAACGCTGTGGACACAGCG +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQKLTVC*NAVDTA
Trigger: CGCTGTGTCCACAGCGTTCAAGCAAACAGTGAGTTT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGGAAAAACTCACTGTTaGCTTGAACGCTGTGGACAC +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMGKTHC*LERCGH
Trigger: GTGTCCACAGCGTTCAAGCAAACAGTGAGTTTTTCC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGAATACCCTCATGTCTaGAGGTGCAAGCAGGTCAAC +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAEYPHV*RCKQVN
Trigger: GTTGACCTGCTTGCACCTCAAGACATGAGGGTATTC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTATACCGTGCAGCTCTTaGGGTCCAGTTGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAIPCSS*GPVVPE
Trigger: TTCTGGAACAACTGGACCCAAAGAGCTGCACGGTAT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361923.2
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGGGAGTGACACTTCTCTaGCTTTCTGTCTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQGVTLL*LSVFTS
Trigger: GGAGGTGAAGACAGAAAGCAAGAGAAGTGTCACTCC...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGTCCCCGTCACTGGCTaGAATGATGATTTGGTCATT +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMVPVTG*NDDLVI
Trigger: AATGACCAAATCATCATTCAAGCCAGTGACGGGGAC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGGATACAGTTGATCTGTaGATAGGATGGGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMDTVDL*IGWAVL
Trigger: GAGCACAGCCCATCCTATCAACAGATCAACTGTATC...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGTCATTGCTGACGACATaGAGGGTGATATCGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMSLLTT*RVISQK
Trigger: CTTCTGCGATATCACCCTCAATGTCGTCAGCAATGA...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCTGTACGTCCTGAGATaGCTGCCCATTTTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQLYVLR*LPILGD
Trigger: ATCTCCCAAAATGGGCAGCAATCTCAGGACGTACAG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGAGGGGAACGCCAGGTaGAATGAAGCCTGTATGAAC +
Preference number: 5 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSEGNAR*NEACMN
Trigger: GTTCATACAGGCTTCATTCAACCTGGCGTTCCCCTC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS CCA 90 bp GGGATTTGCAAACCAGCTTGTAAGGCTTGGACATCATCTGCCTTGTaGTTCTGTTTGTCTTCTTCTGAGGAGGAAGAAGTTGTATTTGTA +
Preference number: 5 (lower is better)
Translates to: GICKPACKAWTSSAL*FCLSSSEEEEVVFV
Trigger: TACAAATACAACTTCTTCCTCCTCAGAAGAAGACAAACAGAACCACAAGGCAGATGATGTCCAAGCCTTACAAGCTGGTTTGCAAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAAACTCACTGTTTGCTaGAACGCTGTGGACACAGCG +
Preference number: 5 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSKLTVC*NAVDTA
Trigger: CGCTGTGTCCACAGCGTTCAAGCAAACAGTGAGTTT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAATACCCTCATGTCTaGAGGTGCAAGCAGGTCAAC +
Preference number: 5 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMEYPHV*RCKQVN
Trigger: GTTGACCTGCTTGCACCTCAAGACATGAGGGTATTC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGGAGTGACACTTCTCTaGCTTTCTGTCTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMGVTLL*LSVFTS
Trigger: GGAGGTGAAGACAGAAAGCAAGAGAAGTGTCACTCC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGTCCCCGTCACTGGCTaGAATGATGATTTGGTCATT +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAVPVTG*NDDLVI
Trigger: AATGACCAAATCATCATTCAAGCCAGTGACGGGGAC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGATACAGTTGATCTGTaGATAGGATGGGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLADTVDL*IGWAVL
Trigger: GAGCACAGCCCATCCTATCAACAGATCAACTGTATC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGTGGACATCATCTGCCTaGTGGTTCTGTTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMWTSSA*WFCLSS
Trigger: AGAAGACAAACAGAACCACAAGGCAGATGATGTCCA...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTTCATTGCTGACGACATaGAGGGTGATATCGCAGAAG +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLASLLTT*RVISQK
Trigger: CTTCTGCGATATCACCCTCAATGTCGTCAGCAATGA...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGAACACAATACTCAGTTaGTGGGCACGTGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMNTILS*WARVPS
Trigger: AGAAGGAACACGTGCCCACAAACTGAGTATTGTGTT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361923.2
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCTGCTCTCACTGCCATaGTTGCCTGTAACACAATAC +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALLSLP*LPVTQY
Trigger: GTATTGTGTTACAGGCAACAATGGCAGTGAGAGCAG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361923.2
ENST00000614998.4
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCTGCTCTCACTGCCATaGTTGCCTGTAACACAATAC +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQLLSLP*LPVTQY
Trigger: GTATTGTGTTACAGGCAACAATGGCAGTGAGAGCAG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361923.2
ENST00000614998.4
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGACACTGATACTCAGTTaGTGGGCACGTGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQTLILS*WARVPS
Trigger: AGAAGGAACACGTGCCCACAAACTGAGTATCAGTGT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613533.4
CDS TCA 90 bp ACGGTGTTCTCGTCATCAACGCAGATTCTATGCTTTAAGACACACTaGAGATTCACCTTCTTCAAGAAGCTGTCCTTGACAAACCTCATT +
Preference number: 5 (lower is better)
Translates to: TVFSSSTQILCFKTH*RFTFFKKLSLTNLI
Trigger: AATGAGGTTTGTCAAGGACAGCTTCTTGAAGAAGGTGAATCTTCAGTGTGTCTTAAAGCATAGAATCTGCGTTGATGACGAGAACACCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602883.1
CDS CCA 90 bp TTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTaGAAAGGGTATGAAGGTTCATCCTCACAGTCACTCAACAGCTGT +
Preference number: 5 (lower is better)
Translates to: FKSPGLKKVCLCNTS*KGYEGSSSQSLNSC
Trigger: ACAGCTGTTGAGTGACTGTGAGGATGAACCTTCATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000494684.1
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAACTCTGTTTCGATCTaGCTGTTCACTGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSNSVSI*LFTVAA
Trigger: AGCAGCCACAGTGAACAGCAAGATCGAAACAGAGTT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGGAAAAACTCACTGTTaGCTTGAACGCTGTGGACAC +
Preference number: 5 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSGKTHC*LERCGH
Trigger: GTGTCCACAGCGTTCAAGCAAACAGTGAGTTTTTCC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGGATGTAGTCTCCGTTTaGAGTACAAAATCGAATGGG +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMDVVSV*STKSNG
Trigger: CCCATTCGATTTTGTACTCAAAACGGAGACTACATC...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGTCCCCGTCACTGGCTaGAATGATGATTTGGTCATT +
Preference number: 5 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMVPVTG*NDDLVI
Trigger: AATGACCAAATCATCATTCAAGCCAGTGACGGGGAC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGATACAGTTGATCTGTaGATAGGATGGGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMDTVDL*IGWAVL
Trigger: GAGCACAGCCCATCCTATCAACAGATCAACTGTATC...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGCTGAGGAGGAAGAAGTaGTATTTGTACAGGAGATAC +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMLRRKK*YLYRRY
Trigger: GTATCTCCTGTACAAATACAACTTCTTCCTCCTCAG...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGCTGAGGAGGAAGAAGTaGTATTTGTACAGGAGATAC +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMLRRKK*YLYRRY
Trigger: GTATCTCCTGTACAAATACAACTTCTTCCTCCTCAG...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGTTTGCTCCTGCTTTCTaGCTGAAGATAGGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQFAPAF*LKIGAV
Trigger: TACAGCTCCTATCTTCAGCAAGAAAGCAGGAGCAAA...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTTTTGCTCCTGCTTTCTaGCTGAAGATAGGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAFAPAF*LKIGAV
Trigger: TACAGCTCCTATCTTCAGCAAGAAAGCAGGAGCAAA...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGCTCTCACTGCCATTGTaGCCTGTAACACAATACTCA +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQLSLPL*PVTQYS
Trigger: TGAGTATTGTGTTACAGGCAACAATGGCAGTGAGAG...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361923.2
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCTCTCACTGCCATTGTaGCCTGTAACACAATACTCA +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALSLPL*PVTQYS
Trigger: TGAGTATTGTGTTACAGGCAACAATGGCAGTGAGAG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361923.2
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGTTGAATGTCGATTTCTaGAGTGACAGTCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMLNVDF*SDSLAL
Trigger: CAAAGCCAGACTGTCACTCAAGAAATCGACATTCAA...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGACAAGTGACACAGGCTaGAATGTCGATTTCTTGAGT +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMTSDTG*NVDFLS
Trigger: ACTCAAGAAATCGACATTCAAGCCTGTGTCACTTGT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTGATGTAGTCTCCGTTTaGAGTACAAAATCGAATGGG +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLADVVSV*STKSNG
Trigger: CCCATTCGATTTTGTACTCAAAACGGAGACTACATC...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGAACACAATACTCAGTTaGTGGGCACGTGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMNTILS*WARVPS
Trigger: AGAAGGAACACGTGCCCACAAACTGAGTATTGTGTT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361923.2
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGAGTGACAGTCTGGCTTaGAATCCAATTATACACCTT +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMSDSLA*NPIIHL
Trigger: AAGGTGTATAATTGGATTCAAAGCCAGACTGTCACT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTTTGAATGTCGATTTCTaGAGTGACAGTCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALNVDF*SDSLAL
Trigger: CAAAGCCAGACTGTCACTCAAGAAATCGACATTCAA...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGACAAGTGACACAGGCTaGAATGTCGATTTCTTGAGT +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQTSDTG*NVDFLS
Trigger: ACTCAAGAAATCGACATTCAAGCCTGTGTCACTTGT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGATACTTCAAAACTTTTaGGTGTATGGCAACCATCAG +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMILQNF*VYGNHQ
Trigger: CTGATGGTTGCCATACACCAAAAAGTTTTGAAGTAT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGATACTTCAAAACTTTTaGGTGTATGGCAACCATCAG +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMILQNF*VYGNHQ
Trigger: CTGATGGTTGCCATACACCAAAAAGTTTTGAAGTAT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTGATGTAGTCTCCGTTTaGAGTACAAAATCGAATGGG +
Preference number: 5 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSDVVSV*STKSNG
Trigger: CCCATTCGATTTTGTACTCAAAACGGAGACTACATC...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GAATGTTTCATCTTAATTATGGAGGGGAACGCCAGGTTGAATGAAGCCTGTATGATTGTTTTTCAGTGTTaGGTGGAAGGAAGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: ECFILIMEGNARLNEACMIVFQC*VEGSKG
Trigger: ACCTTTACTTCCTTCCACCAAACACTGAAAAACAAT...CATACAGGCTTCATTCAACCTGGCGTTCCCCTCCATAATTAAGATGAAACATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp AAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTGGAAAGGGTATGATTGTTTTTCAGTGTTaGGTGGAAGGAAGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: KVQDLKRSVCVTRLGKGMIVFQC*VEGSKG
Trigger: ACCTTTACTTCCTTCCACCAAACACTGAAAAACAAT...CATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCTGAGGAGGAAGAAGTaGTATTTGTACAGGAGATAC +
Preference number: 5 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSLRRKK*YLYRRY
Trigger: GTATCTCCTGTACAAATACAACTTCTTCCTCCTCAG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGTTGAATGTCGATTTCTaGAGTGACAGTCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMLNVDF*SDSLAL
Trigger: CAAAGCCAGACTGTCACTCAAGAAATCGACATTCAA...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTCTGGAGCGACCTCTTTaGTATAAATTGATTGGAAAG +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLALERPL*YKLIGK
Trigger: CTTTCCAATCAATTTATACAAAAGAGGTCGCTCCAG...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS CCA 90 bp GGAAGAAGTTGTATTTGTACAGGAGATACACTTTCTTTTCAAAGCTaGAATGTTGTAGCTCTTCAGGTATCTGATGACACTGTCGATACA +
Preference number: 5 (lower is better)
Translates to: GRSCICTGDTLSFQS*NVVALQVSDDTVDT
Trigger: TGTATCGACAGTGTCATCAGATACCTGAAGAGCTACAACATTCCAGCTTTGAAAAGAAAGTGTATCTCCTGTACAAATACAACTTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTATACTTCAAAACTTTTaGGTGTATGGCAACCATCAG +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAILQNF*VYGNHQ
Trigger: CTGATGGTTGCCATACACCAAAAAGTTTTGAAGTAT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAGTGGCAAAAACTTTATTACTACAGAAGGTCACTGACAGACAATCTACTGGCTATTGTTTTTCAGTGTTaGGTGGAAGGAAGTAAAGGT +
Preference number: 5 (lower is better)
Translates to: QWQKLYYYRRSLTDNLLAIVFQC*VEGSKG
Trigger: ACCTTTACTTCCTTCCACCAAACACTGAAAAACAAT...AGCCAGTAGATTGTCTGTCAGTGACCTTCTGTAGTAATAAAGTTTTTGCCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGAGGAAGAAGTTGTATTaGTACAGGAGATACACTTTC +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQRKKLY*YRRYTF
Trigger: GAAAGTGTATCTCCTGTACAAATACAACTTCTTCCT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp GATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGGAGCAGAGATTGCTGCCCATTTaGGGAGATTTTAGAAGAATA +
Preference number: 5 (lower is better)
Translates to: DQHTHKRFRNHLTIKMEQRLLPI*GDFRRI
Trigger: TATTCTTCTAAAATCTCCCAAAATGGGCAGCAATCT...CTGCTCCATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp CAACCTGATCAACACACACACAAACGCTTCAGAAATCACTTAACTATCAAGATGAGTGACAGTCTGGCTTaGAATCCAATTATACACCTT +
Preference number: 5 (lower is better)
Translates to: QPDQHTHKRFRNHLTIKMSDSLA*NPIIHL
Trigger: AAGGTGTATAATTGGATTCAAAGCCAGACTGTCACT...CATCTTGATAGTTAAGTGATTTCTGAAGCGTTTGTGTGTGTGTTGATCAGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAGTGACAGTCTGGCTTaGAATCCAATTATACACCTT +
Preference number: 5 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSSDSLA*NPIIHL
Trigger: AAGGTGTATAATTGGATTCAAAGCCAGACTGTCACT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTCTGGAGCGACCTCTTTaGTATAAATTGATTGGAAAG +
Preference number: 5 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSLERPL*YKLIGK
Trigger: CTTTCCAATCAATTTATACAAAAGAGGTCGCTCCAG...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAGGAAGAAGTTGTATTaGTACAGGAGATACACTTTC +
Preference number: 5 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSRKKLY*YRRYTF
Trigger: GAAAGTGTATCTCCTGTACAAATACAACTTCTTCCT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS-3UTR CAA 90 bp TCATGGTCATTTAAAAGTCCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTAGATTGCTGCCCATTTaGGGAGATTTTAGAAGAATA +
Preference number: 5 (lower is better)
Translates to: SWSFKSPGLKKVCLCNTSRLLPI*GDFRRI
Trigger: TATTCTTCTAAAATCTCCCAAAATGGGCAGCAATCT...AGACGTGTTACACAGACAGACCTTTTTAAGTCCTGGACTTTTAAATGACCATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361923.2
ENST00000613533.4
ENST00000614998.4
CDS GCA 72 bp CGGGGCATCTCGAGGTCTCCGCGGGGCTCCACGTCGTaGTGGGACGGCCCGCAGCCTGCTTCTCGCTCACTT +
Preference number: 6 (lower is better)
Translates to: RGISRSPRGSTS*WDGPQPASRSL
Trigger: AAGTGAGCGAGAAGCAGGCTGCGGGCCGTCCCAGCACGACGTGGAGCCCCGCGGAGACCTCGAGATGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000613533.4
ENST00000614998.4
CDS CCA 72 bp GGCATCTCGAGGTCTCCGCGGGGCTCCACGTCGTGCTaGGACGGCCCGCAGCCTGCTTCTCGCTCACTTTGC +
Preference number: 6 (lower is better)
Translates to: GISRSPRGSTSC*DGPQPASRSLC
Trigger: GCAAAGTGAGCGAGAAGCAGGCTGCGGGCCGTCCCAGCACGACGTGGAGCCCCGCGGAGACCTCGAGATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000613533.4
ENST00000614998.4
CDS CCA 72 bp AAGCTGGGACGAGGTAAGGGGCCTGGCTGGGCACCATaGCGGCAGGTGGGAAGGTCGGGCTCGAGGTGTGCG +
Preference number: 6 (lower is better)
Translates to: KLGRGKGPGWAP*RQVGRSGSRCA
Trigger: CGCACACCTCGAGCCCGACCTTCCCACCTGCCGCCATGGTGCCCAGCCAGGCCCCTTACCTCGTCCCAGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CCA 72 bp GCGGGGACCAGAGCCGGTGTTCGAGCTGCTGCTGTCTaGCGGCTCCGGCAGCTTCTTCCGCTTGTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: AGTRAGVRAAAV*RLRQLLPLVLP
Trigger: GGGAAGCACAAGCGGAAGAAGCTGCCGGAGCCGCCAGACAGCAGCAGCTCGAACACCGGCTCTGGTCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CAA 72 bp CTGCTGCTGTCTGGCGGCTCCGGCAGCTTCTTCCGCTaGTGCTTCCCTTTCCTGCAGCCGGCCGACCGCGTC +
Preference number: 6 (lower is better)
Translates to: LLLSGGSGSFFR*CFPFLQPADRV
Trigger: GACGCGGTCGGCCGGCTGCAGGAAAGGGAAGCACAAGCGGAAGAAGCTGCCGGAGCCGCCAGACAGCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS GCA 72 bp GCGGGGCTCCACGTCGTGCTGGGACGGCCCGCAGCCTaGTTCTCGCTCACTTTGCAGTCAGTGACAGACACC +
Preference number: 6 (lower is better)
Translates to: AGLHVVLGRPAA*FSLTLQSVTDT
Trigger: GGTGTCTGTCACTGACTGCAAAGTGAGCGAGAAGCAGGCTGCGGGCCGTCCCAGCACGACGTGGAGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000613533.4
ENST00000614998.4
CDS GCA 72 bp CCATGCACCTGCTCCGCCTTCGTCTCCTCCACACGGTaGCCACTGGCCTCACTGGAGGAGGCGATGCTGACA +
Preference number: 6 (lower is better)
Translates to: PCTCSAFVSSTR*PLASLEEAMLT
Trigger: TGTCAGCATCGCCTCCTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGAGACGAAGGCGGAGCAGGTGCATGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463106.1
CDS GCA 72 bp AAGGTCATCTGCTCCGCCTTCGTCTCCTCCACACGGTaGCCACTGGCCTCACTGGAGGAGGCGATGCTGACA +
Preference number: 6 (lower is better)
Translates to: KVICSAFVSSTR*PLASLEEAMLT
Trigger: TGTCAGCATCGCCTCCTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGAGACGAAGGCGGAGCAGATGACCTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS GCA 72 bp TGCTGTTCACTGTGGCTGCTGTCCGCCAATTTCCTCTaGAGATGGAACTCGGGGCTCCACCGCTCCCCCGAT +
Preference number: 6 (lower is better)
Translates to: CCSLWLLSANFL*RWNSGLHRSPD
Trigger: ATCGGGGGAGCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCGGACAGCAGCCACAGTGAACAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000613533.4
ENST00000614998.4
CDS GCA 72 bp CCCTGGCTGTCTCTGGGGGTGGGACATGGACAATGGTaGTGCTGTAACCGCATTGGCTTATGCCCGACCCCA +
Preference number: 6 (lower is better)
Translates to: PWLSLGVGHGQW*CCNRIGLCPTP
Trigger: TGGGGTCGGGCATAAGCCAATGCGGTTACAGCAGCACCATTGTCCATGTCCCACCCCCAGAGACAGCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CCA 72 bp TCACTGTGGCTGCTGTCCGCCAATTTCCTCTGCAGATaGAACTCGGGGCTCCACCGCTCCCCCGATTCTTCG +
Preference number: 6 (lower is better)
Translates to: SLWLLSANFLCR*NSGLHRSPDSS
Trigger: CGAAGAATCGGGGGAGCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCGGACAGCAGCCACAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000613533.4
ENST00000614998.4
CDS GCA 72 bp TGGCTGTCTCTGGGGGTGGGACATGGACAATGGTGCTaGTGTAACCGCATTGGCTTATGCCCGACCCCAAGC +
Preference number: 6 (lower is better)
Translates to: WLSLGVGHGQWC*CNRIGLCPTPS
Trigger: GCTTGGGGTCGGGCATAAGCCAATGCGGTTACAGCAGCACCATTGTCCATGTCCCACCCCCAGAGACAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CCA 72 bp CGACCCCAAGCTCAGCATCGCCGTGGACAGGATCTGTaGAGCTCCTCCTCCTGTGTCTATGGACCGTCCATT +
Preference number: 6 (lower is better)
Translates to: RPQAQHRRGQDL*SSSSCVYGPSI
Trigger: AATGGACGGTCCATAGACACAGGAGGAGGAGCTCCACAGATCCTGTCCACGGCGATGCTGAGCTTGGGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CCA 72 bp ATTGGCTTATGCCCGACCCCAAGCTCAGCATCGCCGTaGACAGGATCTGTGGAGCTCCTCCTCCTGTGTCTA +
Preference number: 6 (lower is better)
Translates to: IGLCPTPSSASP*TGSVELLLLCL
Trigger: TAGACACAGGAGGAGGAGCTCCACAGATCCTGTCCACGGCGATGCTGAGCTTGGGGTCGGGCATAAGCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CAA 72 bp GGGGTGGGTCCAGAGTTGGACTCATTGCTGACGACATaGAGGGTGATATCGCAGAAGAGGCTGTCGCCCCCA +
Preference number: 6 (lower is better)
Translates to: GVGPELDSLLTT*RVISQKRLSPP
Trigger: TGGGGGCGACAGCCTCTTCTGCGATATCACCCTCAATGTCGTCAGCAATGAGTCCAACTCTGGACCCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CCA 72 bp CCCCACGTGTTTAAATTCTTCCGAGGTCAAAGGGGCTaGCTGCATGTTCAGGGTCCAGGGCTCACAGAAGAG +
Preference number: 6 (lower is better)
Translates to: PHVFKFFRGQRG*LHVQGPGLTEE
Trigger: CTCTTCTGTGAGCCCTGGACCCTGAACATGCAGCCAGCCCCTTTGACCTCGGAAGAATTTAAACACGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CCA 72 bp TATCGCAGAAGAGGCTGTCGCCCCCAGGAATGGACATaGCAAAAACGATGGCGACAACAGAGGACAGACAGG +
Preference number: 6 (lower is better)
Translates to: YRRRGCRPQEWT*QKRWRQQRTDR
Trigger: CCTGTCTGTCCTCTGTTGTCGCCATCGTTTTTGCCATGTCCATTCCTGGGGGCGACAGCCTCTTCTGCGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS GCA 72 bp GGTACCTGGTATGTCATGAGAATGCGCTCAGGTGTCTaGCGTATCATTCTCCAGATGGGCTCTTCGGCGACA +
Preference number: 6 (lower is better)
Translates to: GTWYVMRMRSGV*RIILQMGSSAT
Trigger: TGTCGCCGAAGAGCCCATCTGGAGAATGATACGGCAGACACCTGAGCGCATTCTCATGACATACCAGGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CAA 90 bp AGGAAGCTGAGCTCTGGCAGTGTGCGCGTAGAATACCCTCATGTCTaGAGGTGCAAGCAGGTCAACAAAGTGAGAAGACGCCAGGACATC +
Preference number: 6 (lower is better)
Translates to: RKLSSGSVRVEYPHV*RCKQVNKVRRRQDI
Trigger: GATGTCCTGGCGTCTTCTCACTTTGTTGACCTGCTTGCACCTCAAGACATGAGGGTATTCTACGCGCACACTGCCAGAGCTCAGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000473653.1
ENST00000602883.1
ENST00000613533.4
ENST00000614998.4
CDS TCA 72 bp GGAAGTAAAGGTCTTACATTCACCACCACCATTCGCTaGCTCACCACCACCATTCGGTTCTGTGCGTGTCCC +
Preference number: 6 (lower is better)
Translates to: GSKGLTFTTTIR*LTTTIRFCACP
Trigger: GGGACACGCACAGAACCGAATGGTGGTGGTGAGTCAGCGAATGGTGGTGGTGAATGTAAGACCTTTACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CAA 72 bp GCACCGGTAGTAGCAGGACTGCTCTCACTGCCATTGTaGCCTGTAACACAATACTCAGTTTGTGGGCACGTG +
Preference number: 6 (lower is better)
Translates to: APVVAGLLSLPL*PVTQYSVCGHV
Trigger: CACGTGCCCACAAACTGAGTATTGTGTTACAGGCAACAATGGCAGTGAGAGCAGTCCTGCTACTACCGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361923.2
ENST00000614998.4
CDS TCA 72 bp GCTGGGCAGGGTGATGTACATGAATCAGATAGGGGATaGTCCGGAATGGGGAGTGACACTTCTCTTGCTTTC +
Preference number: 6 (lower is better)
Translates to: AGQGDVHESDRG*SGMGSDTSLAF
Trigger: GAAAGCAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCCTATCTGATTCATGTACATCACCCTGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000613533.4
ENST00000614998.4
CDS GCA 72 bp AGTGGCCAGCTCCTCAAGACTGTACATGCTCACATCTaGCTGAGGTGCTCCATTCTGACTGAGAATCTGGAA +
Preference number: 6 (lower is better)
Translates to: SGQLLKTVHAHI*LRCSILTENLE
Trigger: TTCCAGATTCTCAGTCAGAATGGAGCACCTCAGGCAGATGTGAGCATGTACAGTCTTGAGGAGCTGGCCACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000473653.1
ENST00000613533.4
ENST00000614998.4
CDS GCA 72 bp GCTGGACACGCTCACGTGAACTGGGTTCGAACTTTATaGCGACCAATGATGAAAGAAATCTTCCGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: AGHAHVNWVRTL*RPMMKEIFRLQ
Trigger: CTGGAGCCGGAAGATTTCTTTCATCATTGGTCGGCATAAAGTTCGAACCCAGTTCACGTGAGCGTGTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463106.1
CDS CCA 72 bp TTTGGGTCCAGTTGTTCCAGAAAGGAAGCTGAGCTCTaGCAGTGTGCGCGTAGAATACCCTCATGTCTTGAG +
Preference number: 6 (lower is better)
Translates to: FGSSCSRKEAEL*QCARRIPSCLE
Trigger: CTCAAGACATGAGGGTATTCTACGCGCACACTGCCAGAGCTCAGCTTCCTTTCTGGAACAACTGGACCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000473653.1
ENST00000602883.1
ENST00000613533.4
ENST00000614998.4
CDS CAA 72 bp AGTGCACCGGTAGTAGCAGGACTGCTCTCACTGCCATaGTTGCCTGTAACACAATACTCAGTTTGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: SAPVVAGLLSLP*LPVTQYSVCGH
Trigger: GTGCCCACAAACTGAGTATTGTGTTACAGGCAACAATGGCAGTGAGAGCAGTCCTGCTACTACCGGTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361923.2
ENST00000614998.4
CDS TCA 72 bp CAATACTCAGTTTGTGGGCACGTGTTCCTTCTCATCTaGTCTGGAGATTCAGAGGGTCTGGGCATCTCTTCC +
Preference number: 6 (lower is better)
Translates to: QYSVCGHVFLLI*SGDSEGLGISS
Trigger: GGAAGAGATGCCCAGACCCTCTGAATCTCCAGATCAGATGAGAAGGAACACGTGCCCACAAACTGAGTATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361923.2
ENST00000614998.4
CDS CCA 72 bp TGGCACATAACTTCTCTGCAAACTGTGCCATACACCTaGGTGGACGGTGTTCTCGTCATCAACGCAGATTCT +
Preference number: 6 (lower is better)
Translates to: WHITSLQTVPYT*VDGVLVINADS
Trigger: AGAATCTGCGTTGATGACGAGAACACCGTCCACCCAGGTGTATGGCACAGTTTGCAGAGAAGTTATGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602883.1
CDS TCA 72 bp CACCATTCGGTTCTGTGCGTGTCCCCGTCACTGGCTTaGATGATGATTTGGTCATTGACTCAATGTAGAGCT +
Preference number: 6 (lower is better)
Translates to: HHSVLCVSPSLA*MMIWSLTQCRA
Trigger: AGCTCTACATTGAGTCAATGACCAAATCATCATTCAAGCCAGTGACGGGGACACGCACAGAACCGAATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CAA 90 bp GTAGCTCTTCAGGTATCTGATGACACTGTCGATACAGTTGATCTGTaGATAGGATGGGCTGTGCTCATCGTTCCTCAAATCCTCACAGGG +
Preference number: 6 (lower is better)
Translates to: VALQVSDDTVDTVDL*IGWAVLIVPQILTG
Trigger: CCCTGTGAGGATTTGAGGAACGATGAGCACAGCCCATCCTATCAACAGATCAACTGTATCGACAGTGTCATCAGATACCTGAAGAGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS TCA 72 bp ACATGCTCACATCTGCCTGAGGTGCTCCATTCTGACTaGGAATCTGGAAAAACTCACTGTTTGCTTGAACGC +
Preference number: 6 (lower is better)
Translates to: TCSHLPEVLHSD*ESGKTHCLLER
Trigger: GCGTTCAAGCAAACAGTGAGTTTTTCCAGATTCTCAGTCAGAATGGAGCACCTCAGGCAGATGTGAGCATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000473653.1
ENST00000613533.4
ENST00000614998.4
CDS CAA 90 bp AGTGACACAGGCTTGAATGTCGATTTCTTGAGTGACAGTCTGGCTTaGAATCCAATTATACACCTTAGCCAGCTCCTCCTTTTGCCCATG +
Preference number: 6 (lower is better)
Translates to: SDTGLNVDFLSDSLA*NPIIHLSQLLLLPM
Trigger: CATGGGCAAAAGGAGGAGCTGGCTAAGGTGTATAATTGGATTCAAAGCCAGACTGTCACTCAAGAAATCGACATTCAAGCCTGTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000494684.1
ENST00000613533.4
ENST00000614998.4
CDS CCA 72 bp CCAGGACTTAAAAAGGTCTGTCTGTGTAACACGTCTTaGAAAGGGTATGAAGGTTCATCCTCACAGTCACTC +
Preference number: 6 (lower is better)
Translates to: PGLKKVCLCNTS*KGYEGSSSQSL
Trigger: GAGTGACTGTGAGGATGAACCTTCATACCCTTTCCAAGACGTGTTACACAGACAGACCTTTTTAAGTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000494684.1
ENST00000613533.4
ENST00000614998.4
CDS CAA 72 bp CAGGTATCTGATGACACTGTCGATACAGTTGATCTGTaGATAGGATGGGCTGTGCTCATCGTTCCTCAAATC +
Preference number: 6 (lower is better)
Translates to: QVSDDTVDTVDL*IGWAVLIVPQI
Trigger: GATTTGAGGAACGATGAGCACAGCCCATCCTATCAACAGATCAACTGTATCGACAGTGTCATCAGATACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CAA 72 bp TGCAAACCAGCTTGTAAGGCTTGGACATCATCTGCCTaGTGGTTCTGTTTGTCTTCTTCTGAGGAGGAAGAA +
Preference number: 6 (lower is better)
Translates to: CKPACKAWTSSA*WFCLSSSEEEE
Trigger: TTCTTCCTCCTCAGAAGAAGACAAACAGAACCACAAGGCAGATGATGTCCAAGCCTTACAAGCTGGTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CAA 90 bp CAAATCCTCACAGGGCTCAGTGTACACACTATTGTTTTTCAGTGTTaGGTGGAAGGAAGTAAAGGTCTTACATTCACCACCACCATTCGG +
Preference number: 6 (lower is better)
Translates to: QILTGLSVHTIVFQC*VEGSKGLTFTTTIR
Trigger: CCGAATGGTGGTGGTGAATGTAAGACCTTTACTTCCTTCCACCAAACACTGAAAAACAATAGTGTGTACACTGAGCCCTGTGAGGATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361923.2
CDS CAA 90 bp GCTGGGATTTGCAAACCAGCTTGTAAGGCTTGGACATCATCTGCCTaGTGGTTCTGTTTGTCTTCTTCTGAGGAGGAAGAAGTTGTATTT +
Preference number: 6 (lower is better)
Translates to: AGICKPACKAWTSSA*WFCLSSSEEEEVVF
Trigger: AAATACAACTTCTTCCTCCTCAGAAGAAGACAAACAGAACCACAAGGCAGATGATGTCCAAGCCTTACAAGCTGGTTTGCAAATCCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CAA 90 bp CAAATCCTCACAGGGCTCAGTGTACACACTATTGTTTTTCAGTGTTaGGTGGAAGGAAGTAAAGGTCTTACATTCACCACCACCATTCGC +
Preference number: 6 (lower is better)
Translates to: QILTGLSVHTIVFQC*VEGSKGLTFTTTIR
Trigger: GCGAATGGTGGTGGTGAATGTAAGACCTTTACTTCCTTCCACCAAACACTGAAAAACAATAGTGTGTACACTGAGCCCTGTGAGGATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS GCA 72 bp AAAACATCCTCATTTAGTGGGCTCGTTCGAACTTTATaGCGACCAATGATGAAAGAAATCTTCCGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: KTSSFSGLVRTL*RPMMKEIFRLQ
Trigger: CTGGAGCCGGAAGATTTCTTTCATCATTGGTCGGCATAAAGTTCGAACGAGCCCACTAAATGAGGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS CAA 72 bp GGCTTGAATGTCGATTTCTTGAGTGACAGTCTGGCTTaGAATCCAATTATACACCTTAGCCAGCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: GLNVDFLSDSLA*NPIIHLSQLLL
Trigger: AAGGAGGAGCTGGCTAAGGTGTATAATTGGATTCAAAGCCAGACTGTCACTCAAGAAATCGACATTCAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000494684.1
ENST00000613533.4
ENST00000614998.4
CDS CAA 90 bp TGCTCATCGTTCCTCAAATCCTCACAGGGCTCAGTGTACACACTATaGTTTTTCAGTGTTTGGTGGAAGGAAGTAAAGGTCTTACATTCA +
Preference number: 6 (lower is better)
Translates to: CSSFLKSSQGSVYTL*FFSVWWKEVKVLHS
Trigger: TGAATGTAAGACCTTTACTTCCTTCCACCAAACACTGAAAAACAATAGTGTGTACACTGAGCCCTGTGAGGATTTGAGGAACGATGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4
CDS TCA 72 bp TCGTCATCAACGCAGATTCTATGCTTTAAGACACACTaGAGATTCACCTTCTTCAAGAAGCTGTCCTTGACA +
Preference number: 6 (lower is better)
Translates to: SSSTQILCFKTH*RFTFFKKLSLT
Trigger: TGTCAAGGACAGCTTCTTGAAGAAGGTGAATCTTCAGTGTGTCTTAAAGCATAGAATCTGCGTTGATGACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602883.1
CDS GCA 72 bp TTACGATTCAGGATCAAAGCAGCCTGTTCAGAAATGTaGACTAACCTTCCAGACAGAAATGAAAATACTGCC +
Preference number: 6 (lower is better)
Translates to: LRFRIKAACSEM*TNLPDRNENTA
Trigger: GGCAGTATTTTCATTTCTGTCTGGAAGGTTAGTGCACATTTCTGAACAGGCTGCTTTGATCCTGAATCGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000377541.5
ENST00000473653.1
ENST00000602883.1
ENST00000613533.4
ENST00000614998.4
CDS CAA 90 bp CATCTGCCTTGTGGTTCTGTTTGTCTTCTTCTGAGGAGGAAGAAGTaGTATTTGTACAGGAGATACACTTTCTTTTCAAAGCTGGAATGT +
Preference number: 6 (lower is better)
Translates to: HLPCGSVCLLLRRKK*YLYRRYTFFSKLEC
Trigger: ACATTCCAGCTTTGAAAAGAAAGTGTATCTCCTGTACAAATACAACTTCTTCCTCCTCAGAAGAAGACAAACAGAACCACAAGGCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361923.2
ENST00000377532.8
ENST00000613533.4
ENST00000614998.4