RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PER1 (Homo sapiens)

Ensembl gene IDs: ENSG00000179094

Ensembl transcript IDs: ENST00000317276.9, ENST00000354903.9, ENST00000577253.5, ENST00000577424.1, ENST00000578089.1, ENST00000578223.1, ENST00000578950.1, ENST00000579065.1, ENST00000579098.1, ENST00000579203.1, ENST00000581082.5, ENST00000581395.5, ENST00000581703.1, ENST00000582719.5, ENST00000583559.1, ENST00000583677.1, ENST00000584202.1, ENST00000585095.1

Found 1144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTGGCCCCGCCTTGGGCCTCCTCGCAGCCCTCTCCCTCACCACTaGCGCCACCGCTGCTGCCCTGCTCGCCTCCACCCTCTTCCATGG +
Preference number: 1 (lower is better)
Translates to: PWPRLGPPRSPLPHH*RHRCCPARLHPLPW
Trigger: CCATGGAAGAGGGTGGAGGCGAGCAGGGCAGCAGCGGTGGCGGCAGTGGTGAGGGAGAGGGCTGCGAGGAGGCCCAAGGCGGGGCCAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR TCA 90 bp GCAGGCTCCAGGAGGCCCCAGGTGGCTACCTCGCTCGCCAAGGGCTaGGGGAGCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAG +
Preference number: 1 (lower is better)
Translates to: AGSRRPQVATSLAKG*GSCGRAVESTQPAQ
Trigger: CTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGAGGTAGCCACCTGGGGCCTCCTGGAGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR CCA 90 bp GAGGCCCCAGGTGGCTACCTCGCTCGCCAAGGGCTGAGGGAGCTGTaGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGAAGC +
Preference number: 1 (lower is better)
Translates to: EAPGGYLARQGLREL*KSCRVHAACPGLGS
Trigger: GCTTCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGAGGTAGCCACCTGGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR GCA 90 bp CAGAGCCCAAGCCAGAGCCCAAGGAGCCCGAGGCTGCGGAGCCTGTaGCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCAC +
Preference number: 1 (lower is better)
Translates to: QSPSQSPRSPRLRSL*RSASPLAAEVRAGH
Trigger: GTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTCGGGCTCCTTGGGCTCTGGCTTGGGCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 90 bp AAGGAGCCCGAGGCTGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTTaGAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTGCGTCC +
Preference number: 1 (lower is better)
Translates to: KEPEAAEPVPERESS*SRSSSRSLEPESAS
Trigger: GGACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTCGGGCTCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR CCA 90 bp TGGCCCTTCCGGACCCAGGAGTGCACAGCACCCAGTTCCCGCCGCTaGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGC +
Preference number: 1 (lower is better)
Translates to: WPFRTQECTAPSSRR*SSENRGCCFCMARS
Trigger: GCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCCTGGGTCCGGAAGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR CCA 90 bp CTCCCACAGTCCACACAGGCCATCACATCAAGAGCCCGAGGCAGTTaGCCCTTCCGGACCCAGGAGTGCACAGCACCCAGTTCCCGCCGC +
Preference number: 1 (lower is better)
Translates to: LPQSTQAITSRARGS*PFRTQECTAPSSRR
Trigger: GCGGCGGGAACTGGGTGCTGTGCACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTGTGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 90 bp TGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTaGTCCCTAAGAGGCCAGAGGCAGCCCCTGGATCCTAGGCTGGTG +
Preference number: 1 (lower is better)
Translates to: WEVTLLWAGLRSSAL*SLRGQRQPLDPRLV
Trigger: CACCAGCCTAGGATCCAGGGGCTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR GCA 90 bp CCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTaGATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGCACAGAGGTC +
Preference number: 1 (lower is better)
Translates to: PSSRRWSSENRGCCF*MARSRSRSCFSTEV
Trigger: GACCTCTGTGCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 90 bp TGCACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTaGTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGC +
Preference number: 1 (lower is better)
Translates to: CTAPSSRRWSSENRG*CFCMARSRSRSCFS
Trigger: GCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 90 bp ACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTaGTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGCACA +
Preference number: 1 (lower is better)
Translates to: TAPSSRRWSSENRGC*FCMARSRSRSCFST
Trigger: TGTGCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 90 bp ATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTaGACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGC +
Preference number: 1 (lower is better)
Translates to: ITSRARGSWPFRTQE*TAPSSRRWSSENRG
Trigger: GCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 90 bp AGTCCACGCAGCCTGCCCAGGTCTCGGAAGCGGCTGAGGAAGGCTTaGTCTTCCTTCTGTGTGTGCAGGGACAGCACGGCCTTGGTCAGC +
Preference number: 1 (lower is better)
Translates to: SPRSLPRSRKRLRKA*SSFCVCRDSTALVS
Trigger: GCTGACCAAGGCCGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR TCA 90 bp AAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGAAGCGGCTaGGGAAGGCTTGCTCTTCCTTCTGTGTGTGCAGGGACAGCACGG +
Preference number: 1 (lower is better)
Translates to: KSCRVHAACPGLGSG*GRLALPSVCAGTAR
Trigger: CCGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR CCA 90 bp GGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTaGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAG +
Preference number: 1 (lower is better)
Translates to: GEGRIPLQRWEVTLL*AGLRSSALCSLRGQ
Trigger: CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR CCA 90 bp GTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATaGCTCGGAGCCGCTCCCGATCCTGCTTCAGCACAGAGGTCATGT +
Preference number: 1 (lower is better)
Translates to: VPAAGPQKTEAAASA*LGAAPDPASAQRSC
Trigger: ACATGACCTCTGTGCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR TCA 90 bp CCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTaGGTCCTGCGTCTGCCTGCAGGGGATCTCCCTCAGGCACCTGGA +
Preference number: 1 (lower is better)
Translates to: PSLQWSEEWGWKAQS*VLRLPAGDLPQAPG
Trigger: TCCAGGTGCCTGAGGGAGATCCCCTGCAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR GCA 90 bp GACACATGGACAGATGGCTCTGGTCCGCCAAACTCCTGTGGGCACTaGCAGCCTAGGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCC +
Preference number: 1 (lower is better)
Translates to: DTWTDGSGPPNSCGH*QPRHSSCPSRPYSA
Trigger: GGCAGAATACGGCCTCGATGGGCAGGAGGAATGCCTAGGCTGGCAGTGCCCACAGGAGTTTGGCGGACCAGAGCCATCTGTCCATGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR CCA 90 bp GGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTaGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: GKDSSPKVGGDTPLG*AAEFCSLLPKRPEA
Trigger: TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR CCA 90 bp ATGACGCGCTGGTCAGCATTGGCCATGAGCAGCCAAATGGGATCCTaGAGCACGTACTTAATCACCTGGTCCCCAGGCTCAGCCCCGCCC +
Preference number: 1 (lower is better)
Translates to: MTRWSALAMSSQMGS*STYLITWSPGSAPP
Trigger: GGGCGGGGCTGAGCCTGGGGACCAGGTGATTAAGTACGTGCTCCAGGATCCCATTTGGCTGCTCATGGCCAATGCTGACCAGCGCGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR TCA 90 bp TCCAGCCCCAGTCCATCCAGCTCTGAGAAGAGTGGGTCATCAGGGTaGCCAGGATCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATC +
Preference number: 1 (lower is better)
Translates to: SSPSPSSSEKSGSSG*PGSWVLLPQSTQAI
Trigger: GATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCACCCTGATGACCCACTCTTCTCAGAGCTGGATGGACTGGGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 90 bp GCTCTGAGAAGAGTGGGTCATCAGGGTGACCAGGATCTTGGGTGCTaGTCCCACAGTCCACACAGGCCATCACATCAAGAGCCCGAGGCA +
Preference number: 1 (lower is better)
Translates to: ALRRVGHQGDQDLGC*SHSPHRPSHQEPEA
Trigger: TGCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCACCCTGATGACCCACTCTTCTCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 90 bp CCAGCTCTGAGAAGAGTGGGTCATCAGGGTGACCAGGATCTTGGGTaGTGCTCCCACAGTCCACACAGGCCATCACATCAAGAGCCCGAG +
Preference number: 1 (lower is better)
Translates to: PALRRVGHQGDQDLG*CSHSPHRPSHQEPE
Trigger: CTCGGGCTCTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCACCCTGATGACCCACTCTTCTCAGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR CCA 90 bp TGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTaGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTC +
Preference number: 1 (lower is better)
Translates to: CQQLCPGEGRIPLQR*EVTLLWAGLRSSAL
Trigger: GAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR TCA 90 bp CAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTaGCTCCTAAGTGGGCATACTTCCTGCCCCTGCCCCCAGGCTAGG +
Preference number: 1 (lower is better)
Translates to: QSWPRIYACLFISDN*LLSGHTSCPCPQAR
Trigger: CCTAGCCTGGGGGCAGGGGCAGGAAGTATGCCCACTTAGGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR CCA 90 bp CATCTGAGTTCTGAGAATTGGGACATAGGAGAAGAAAGCCTCTCATaGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGT +
Preference number: 1 (lower is better)
Translates to: HLSSENWDIGEESLS*TPGDGPRMESSWCS
Trigger: ACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTCTTCTCCTATGTCCCAATTCTCAGAACTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp GCCGCCACCGCTGCTGCCCTGCTCGCCTCCACCCTCTTCCATGGGCTCCAGCCCGCTGCTGCTTCTGCATaGCTCGGAGCCGCTCCCGAT +
Preference number: 2 (lower is better)
Translates to: AATAAALLASTLFHGLQPAAASA*LGAAPD
Trigger: ATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGC...GGGCTGGAGCCCATGGAAGAGGGTGGAGGCGAGCAGGGCAGCAGCGGTGGCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR TCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGATGGATCCTAGGCTGGTaGTGGGGGTCCGGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERWILGW*WGSGPL
Trigger: TAGGGGGCCGGACCCCCATCACCAGCCTAGGATCCA...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR GCA 90 bp GGCCCCAGGTGGCTACCTCGCTCGCCAAGGGCTGAGGGAGCTGTGGAAGAGCTGCCTGAGTCCTGCGTCTaGCTGCAGGGGATCTCCCTC +
Preference number: 2 (lower is better)
Translates to: GPRWLPRSPRAEGAVEELPESCV*LQGISL
Trigger: GAGGGAGATCCCCTGCAGGCAGACGCAGGACTCAGG...CAGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGAGGTAGCCACCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCGCCTTGGCCCCGCCTTaGGCCTCCTCGCAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCALAPP*ASSQPS
Trigger: AGAGGGCTGCGAGGAGGCCCAAGGCGGGGCCAAGGC...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR CAA 90 bp CAAGGAGCCCGAGGCTGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTaGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTGCGTC +
Preference number: 2 (lower is better)
Translates to: QGARGCGACAGARVL*QQKFEQVTGAGKCV
Trigger: GACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTCGGGCTCCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR GCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGGGAACCCCCGGGTCCTaGTTGGGCCTCAGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKGTPGS*LGLRLS
Trigger: GGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGTTCC...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR CCA 90 bp ACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCGGGTCCGGCCCCCTATaGTGGGAGAAGCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: TQFPPLVLRKPRLLLLHGGSGPL*WEKLGQ
Trigger: CTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACCC...GCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGAGGTGACACTCCTCTaGGCTGGGCTGCGGAGTTCT +
Preference number: 2 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTREVTLL*AGLRSS
Trigger: AGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTC...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR TCA 90 bp CTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGTCTGGCTGCTGCGAGTaGTGCTGGCTGAGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: LVLRKPRLLLLHGSEPLPSGCCE*CWLRCC
Trigger: GCAGCACCTCAGCCAGCATCACTCGCAGCAGCCAGA...CGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR GCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGCGGAGTTCTGCTCTCTaGTCCCTAAGAGGCCAGAGG +
Preference number: 2 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRRSSAL*SLRGQR
Trigger: CCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCG...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR GCA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGGACAGCACCTCTGCCTaGCCATCCCAGTGCCATCCC +
Preference number: 2 (lower is better)
Translates to: CPCPQARPEVAYLETAPLDSTSA*PSQCHP
Trigger: GGGATGGCACTGGGATGGGCAGGCAGAGGTGCTGTC...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAAGTAGGCGTCTGGGGCTaGGTCAGGGGCTACTGTGGG +
Preference number: 2 (lower is better)
Translates to: RNKARERLHEGSSWGCAEVGVWG*VRGYCG
Trigger: CCCACAGTAGCCCCTGACCCAGCCCCAGACGCCTAC...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR CAA 90 bp GAGTCCACGCAGCCTGCCCAGGTCTCGGAAGCGGCTGAGGAAGGCTaGCTCTTCCTTCTGTGTGTGCAGGGACAGCACGGCCTTGGTCAG +
Preference number: 2 (lower is better)
Translates to: ESTQPAQVSEAAEEG*LFLLCVQGQHGLGQ
Trigger: CTGACCAAGGCCGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR TCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGTCCAAAGGTGGGAGGTaGCACTCCTCTGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKSKGGR*HSSGLG
Trigger: GCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGA...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR-3UTR TCA 90 bp ACAGGCCATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTGTCCAAAGGTGGGAGGTaGCACTCCTCTGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: TGHHIKSPRQLALPDPGVSKGGR*HSSGLG
Trigger: GCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGA...CACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR GCA 90 bp TCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGAGCCCGAGGCCGAGGCTGCTGCTTCTaGATGGCTCGGAGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: SWVLLPQSTQAITSRARGRGCCF*MARSRS
Trigger: GGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCG...GCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGGGTCCGGCCCCCTATaGTGGGAGAAGCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWGSGPL*WEKLGQ
Trigger: CTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACCC...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGAGAGCAGCTAGGGGCTaGAACCCCCGGGTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRRAARG*NPRVLL
Trigger: AAGCAGGACCCGGGGGTTCCAGCCCCTAGCTGCTCT...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR CCA 90 bp ACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCGACACTCCTCTGGGCTaGGCTGCGGAGTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: TQFPPLVLRKPRLLLLHGDTPLG*AAEFCS
Trigger: AGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTC...GCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGGAGGTGACACTCCTCTaGGCTGGGCTGCGGAGTTCT +
Preference number: 2 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKREVTLL*AGLRSS
Trigger: AGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTC...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR-3UTR CCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAAGGTCCCCACAGAGACTaGACCTGTCCTCTGCCTGTC +
Preference number: 2 (lower is better)
Translates to: RNKARERLHEGSSWGCAEGPHRD*TCPLPV
Trigger: GACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACC...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR CCA 90 bp GTGGAAGCAACACCAGCCTGGGTCCCTGGAGCAGAAACACCTCCCTTAAGACCCGGGACAGCACGGCCTTaGTCAGCCCCACTGGACGGT +
Preference number: 2 (lower is better)
Translates to: VEATPAWVPGAETPPLRPGTARP*SAPLDG
Trigger: ACCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCC...GGGTCTTAAGGGAGGTGTTTCTGCTCCAGGGACCCAGGCTGGTGTTGCTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR GCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGTGGGCTGCGGAGTTCTaGTCTCTGCTCCCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKWAAEF*SLLPKR
Trigger: CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCA...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR-3UTR GCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGCAGGATCTTGGGTGCTaGTCCCACAGTCCACACAGG +
Preference number: 2 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKQDLGC*SHSPHR
Trigger: CCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTG...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGACAGCTGAGAACGCCTaGGTCCCACCTGAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWTAENA*VPPEGQ
Trigger: CTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGT...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR CCA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAACAGGCTGCCCTCCTCTaGCTGCAGCCCGGAACCCCA +
Preference number: 2 (lower is better)
Translates to: GIPPAHRGRILPSLQWSEQAALL*LQPGTP
Trigger: TGGGGTTCCGGGCTGCAGCCAGAGGAGGGCAGCCTG...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp CAGTCCACACAGGCCATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGAGGTCATGTCCCTaGAGGGCACCTGGTAGGTCA +
Preference number: 2 (lower is better)
Translates to: QSTQAITSRARGSWPFRTQRSCP*RAPGRS
Trigger: TGACCTACCAGGTGCCCTCCAGGGACATGACCTCTG...GGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCCTTGGTCAGCCCCACTaGACGGTAGGCGTCTGGGGC +
Preference number: 2 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVLGQPH*TVGVWG
Trigger: GCCCCAGACGCCTACCGTCCAGTGGGGCTGACCAAG...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR CAA 90 bp GCAGCCCCAGCCTCAGCCTCGGAAGAGTCGATGCTGCCAAAGTATTaGCTTGTGTGGCTGCTCTGGCTGCTGCGAGTGATGCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: AAPASASEESMLPKY*LVWLLWLLRVMLAE
Trigger: CTCAGCCAGCATCACTCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGGCTGAGGCTGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR TCA 90 bp CTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGGGTCAGCATTGGCCATaGGCAGCCAAATGGGATCCT +
Preference number: 2 (lower is better)
Translates to: LRKPRLLLLHGSEPLPILGQHWP*AAKWDP
Trigger: AGGATCCCATTTGGCTGCTCATGGCCAATGCTGACC...CAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR GCA 90 bp GAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTGGGCATACTTCCTaGCCCTGCCCCCAGGCTAGG +
Preference number: 2 (lower is better)
Translates to: EAVFCLACNGVKSGAGKPSGHTS*PCPQAR
Trigger: CCTAGCCTGGGGGCAGGGGCAGGAAGTATGCCCACT...GGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR GCA 90 bp GTCTTTCTTGGTCCCCACAGAGACTGGACCTGTCCTCTGCCTGTCGTCGTCAGAAGTGGGCATACTTCCTaGCCCTGCCCCCAGGCTAGG +
Preference number: 2 (lower is better)
Translates to: VFLGPHRDWTCPLPVVVRSGHTS*PCPQAR
Trigger: CCTAGCCTGGGGGCAGGGGCAGGAAGTATGCCCACT...TCTGACGACGACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACCAAGAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR GCA 90 bp GGAGAAGCTAGCGAGGGGCCTGTCCCTAGGCAGGGCCTAGTGGTGGAAGCAACACGGAAGATGGAGGCATaGTGGCAGATGGAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: GEASEGPVPRQGLVVEATRKMEA*WQMEEA
Trigger: TGCTTCCTCCATCTGCCAGCATGCCTCCATCTTCCG...TGTTGCTTCCACCACTAGGCCCTGCCTAGGGACAGGCCCCTCGCTAGCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR CCA 90 bp ATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTGCACAGCAGTTCGAGCAGGTCACTaGAGCCGGAAAGTGCGTCCT +
Preference number: 2 (lower is better)
Translates to: ITSRARGSWPFRTQECTAVRAGH*SRKVRP
Trigger: AGGACGCACTTTCCGGCTCCAGTGACCTGCTCGAAC...TGCTGTGCACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp ATCAGGGTGACCAGGATCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACGTGCTGCCCCCTTCATaGGAGCCTGAACCAGACCCA +
Preference number: 2 (lower is better)
Translates to: IRVTRILGAAPTVHTGHHVLPPS*EPEPDP
Trigger: TGGGTCTGGTTCAGGCTCCCATGAAGGGGGCAGCAC...GTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCACCCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR CAA 90 bp CCTGGGGCTAGGCCAGGCAGGTCCTCCATCATGATGATGTCTTTCTaGGTCCCCACAGAGACTGGACCTGTCCTCTGCCTGTCGTCGTCA +
Preference number: 2 (lower is better)
Translates to: PGARPGRSSIMMMSF*VPTETGPVLCLSSS
Trigger: TGACGACGACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACCAAGAAAGACATCATCATGATGGAGGACCTGCCTGGCCTAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR TCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCTGGTCTAGCCACATCTaGGTTCTGAGAATTGGGACA +
Preference number: 2 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLWSSHI*VLRIGT
Trigger: TGTCCCAATTCTCAGAACTCAGATGTGGCTAGACCA...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR TCA 90 bp GAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCGCGAGTGATGCTGGCTaGGGTGCTGCCCCCTTCATG +
Preference number: 2 (lower is better)
Translates to: ESLSWTPGDGPRMESSWCASDAG*GAAPFM
Trigger: CATGAAGGGGGCAGCACCTCAGCCAGCATCACTCGC...GCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR GCA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAACCTGAGTCCTGCGTCTaGCTGCAGGGGATCTCCCTC +
Preference number: 2 (lower is better)
Translates to: GIPPAHRGRILPSLQWSEPESCV*LQGISL
Trigger: GAGGGAGATCCCCTGCAGGCAGACGCAGGACTCAGG...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR GCA 90 bp GTGGAAGCAACACCAGCCTGGGTCCCTGGAGCAGAAACACCTCCCTTAAGACCCAACTCCTGTGGGCACTaGCAGCCTAGGCATTCCTCC +
Preference number: 2 (lower is better)
Translates to: VEATPAWVPGAETPPLRPNSCGH*QPRHSS
Trigger: GGAGGAATGCCTAGGCTGGCAGTGCCCACAGGAGTT...GGGTCTTAAGGGAGGTGTTTCTGCTCCAGGGACCCAGGCTGGTGTTGCTTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR GCA 90 bp CATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTGCTTCCGGACCCAGGAGTaGACAGCACCCAGTTCCCGC +
Preference number: 2 (lower is better)
Translates to: HGLLEMVPEWSLAGAVSCFRTQE*TAPSSR
Trigger: GCGGGAACTGGGTGCTGTGCACTCCTGGGTCCGGAA...GCAGGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCCCTCTCATGGACTCCTaGAGATGGTCCCAGAATGGA +
Preference number: 2 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCPLMDS*RWSQNG
Trigger: TCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGG...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR-3UTR CCA 90 bp CAGTCCACACAGGCCATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCCTCTCATGGACTCCTaGAGATGGTCCCAGAATGGA +
Preference number: 2 (lower is better)
Translates to: QSTQAITSRARGSWPFRTPLMDS*RWSQNG
Trigger: TCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGG...GGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGGGTCCGGCCCCCTATaGTGGGAGAAGCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKGSGPL*WEKLGQ
Trigger: CTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACCC...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR CCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGATTCCTCTCCAAAGGTaGGAGGTGACACTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKIPLQR*EVTLLW
Trigger: CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAAT...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR-3UTR TCA 90 bp CCCTCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGTCCAAAGGTGGGAGGTaGCACTCCTCTGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: PSRVRFRLSWNMERPLQQSKGGR*HSSGLG
Trigger: GCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGA...CTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR TCA 90 bp TTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGATGGAGGAAGCAGGGTaGGTCCATGGACACATGGAC +
Preference number: 2 (lower is better)
Translates to: LRKEQGQGEVTRGVELGVMEEAG*VHGHMD
Trigger: GTCCATGTGTCCATGGACTCACCCTGCTTCCTCCAT...CACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGCTGAGTTCTGAGAATTaGGACATAGGAGAAGAAAGC +
Preference number: 2 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRLSSEN*DIGEES
Trigger: GCTTTCTTCTCCTATGTCCCAATTCTCAGAACTCAG...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR CCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTGACACTCCTCTGGGCTaGGCTGCGGAGTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: GEATSAACQQLCPGEGRIDTPLG*AAEFCS
Trigger: AGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTC...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR CCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGAGAGGTGACACTCCTCTaGGCTGGGCTGCGGAGTTCT +
Preference number: 2 (lower is better)
Translates to: MERPLQQLVSNFVQGREGEVTLL*AGLRSS
Trigger: AGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTC...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR CCA 90 bp CCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGACTCCCAGGCTGCCCTCCTCTaGCTGCAGCCCGGAACCCCA +
Preference number: 2 (lower is better)
Translates to: PRVGPESMHVSSSVTTDSQAALL*LQPGTP
Trigger: TGGGGTTCCGGGCTGCAGCCAGAGGAGGGCAGCCTG...GGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp AGGTCTCGGAAGCGGCTGAGGAAGGCTTGCTCTTCCTTCTGTGTGTGCAGGGACCTGAAGTCGCTTACCTaGAGACAGCACCTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: RSRKRLRKACSSFCVCRDLKSLT*RQHLCL
Trigger: CAGGCAGAGGTGCTGTCTCCAGGTAAGCGACTTCAG...GTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR CCA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGGACCCCACCCAGAGTTaGCCCAGAATCTATGCATGT +
Preference number: 2 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVDPTQS*PRIYAC
Trigger: ACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTC...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGCCTAGCTTGCAATaGAGTGAAGAGTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCLPSLQ*SEEWGW
Trigger: CCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAG...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR TCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGTGGAAAGCCCAGTCCTaGGTCCTGCGTCTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGWKAQS*VLRLPA
Trigger: TGCAGGCAGACGCAGGACTCAGGACTGGGCTTTCCA...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR TCA 90 bp GGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTGCTGTAGTGGGTCATCAGGGTaGCCAGGATCTTGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: GLLEMVPEWSLAGAVSCCSGSSG*PGSWVL
Trigger: CAGCACCCAAGATCCTGGTCACCCTGATGACCCACT...ACAGCAGGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR GCA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGACAGCACCTCTGCCTaGCCATCCCAGTGCCATCCC +
Preference number: 2 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELDSTSA*PSQCHP
Trigger: GGGATGGCACTGGGATGGGCAGGCAGAGGTGCTGTC...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR GCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCGAGCGCGAGTCCTCTTaGAGCAGAAGTTCGAGCAGG +
Preference number: 2 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLERESS*SRSSSR
Trigger: CCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTC...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR GCA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACTGGACCTGTCCTCTaGCTGTCGTCGTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVTGPVL*LSSSEA
Trigger: AGCCTCTGACGACGACAGGCAGAGGACAGGTCCAGT...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR CCA 90 bp GAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCCTGAAGTCGCTTACCTaGAGACAGCACCTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: EAVFCLACNGVKSGAGKPLKSLT*RQHLCL
Trigger: CAGGCAGAGGTGCTGTCTCCAGGTAAGCGACTTCAG...GGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp TTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGAGCAGGGTGAGTCCATaGACACATGGACAGATGGCT +
Preference number: 2 (lower is better)
Translates to: LRKEQGQGEVTRGVELGVSRVSP*THGQMA
Trigger: AGCCATCTGTCCATGTGTCCATGGACTCACCCTGCT...CACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp GTGACCAGGATCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGGTCATCATGACGCGCTaGTCAGCATTGGCCATGAGC +
Preference number: 2 (lower is better)
Translates to: VTRILGAAPTVHTGHHIKVIMTR*SALAMS
Trigger: GCTCATGGCCAATGCTGACCAGCGCGTCATGATGAC...CTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR GCA 90 bp AAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCATGGGCTGCGGAGTTCTaGTCTCTGCTCCCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: KASHGLLEMVPEWSLAGAWAAEF*SLLPKR
Trigger: CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCA...TGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR GCA 90 bp CATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTGCGACTGGATGAGCTCCTaGCTTCTTCCTCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: HGLLEMVPEWSLAGAVSCDWMSS*LLPPPP
Trigger: TGGAGGAGGAGGAAGAAGGCAGGAGCTCATCCAGTC...GCAGGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR GCA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGCGGCTGAGGAAGGCTTaGTCTTCCTTCTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVRLRKA*SSFCVC
Trigger: GCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCG...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR CCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCACTGAGTTCTGAGAATTaGGACATAGGAGAAGAAAGC +
Preference number: 2 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEALSSEN*DIGEES
Trigger: GCTTTCTTCTCCTATGTCCCAATTCTCAGAACTCAG...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR-3UTR CCA 90 bp GTCTTTCTTGGTCCCCACAGAGACTGGACCTGTCCTCTGCCTGTCGTCGTCAGACAACTGACTCCTAAGTaGGCATACTTCCTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: VFLGPHRDWTCPLPVVVRQLTPK*AYFLPL
Trigger: CAGGGGCAGGAAGTATGCCCACTTAGGAGTCAGTTG...TCTGACGACGACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACCAAGAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR CCA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGCTGCCTAGCTTGCAATaGAGTGAAGAGTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVLPSLQ*SEEWGW
Trigger: CCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAG...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR CAA 90 bp TCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTaGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGAC +
Preference number: 2 (lower is better)
Translates to: SAGIWRGHFSSLSAT*SRGGKDSSPKVGGD
Trigger: GTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR TCA 90 bp CAAATGGGATCCTGGAGCACGTACTTAATCACCTGGTCCCCAGGCTCAGCCCCGGCCACATCTGAGTTCTaGGAATTGGGACATAGGAGA +
Preference number: 2 (lower is better)
Translates to: QMGSWSTYLITWSPGSAPATSEF*ELGHRR
Trigger: TCTCCTATGTCCCAATTCTCAGAACTCAGATGTGGC...CGGGGCTGAGCCTGGGGACCAGGTGATTAAGTACGTGCTCCAGGATCCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR TCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGAGCTCTCCAGGTACCTaGGGATGCTGTCCAGGCAGT +
Preference number: 2 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRSSPGT*GCCPGS
Trigger: ACTGCCTGGACAGCATCCTCAGGTACCTGGAGAGCT...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR TCA 90 bp ACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGGTCTCGGAAGCGGCTaGGGAAGGCTTGCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: TPPRVGPESMHVSSSVTTGLGSG*GRLALP
Trigger: AGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACC...AGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR GCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGCGGAGTTCTGCTCTCTaGTCCCTAAGAGGCCAGAGG +
Preference number: 2 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKRSSAL*SLRGQR
Trigger: CCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCG...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR GCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGTGGGCTGCGGAGTTCTaGTCTCTGCTCCCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKWAAEF*SLLPKR
Trigger: CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCA...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR GCA 90 bp TTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGGTATTCTGCCTAGCTTaGAATGGAGTGAAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: LRKEQGQGEVTRGVELGVVFCLA*NGVKSG
Trigger: CCCACTCTTCACTCCATTGCAAGCTAGGCAGAATAC...CACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR GCA 90 bp AAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCATCAGAAAACCGAGGCTaGTGCTTCTGCATGGCTCGG +
Preference number: 2 (lower is better)
Translates to: KASHGLLEMVPEWSLAGASENRG*CFCMAR
Trigger: CCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGA...TGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGCAATGGAGTGAAGAGTaGGGCTGGAAAGCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGQWSEE*GWKAQS
Trigger: GGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTG...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp CTTGAAGCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCACAATGGAGTGAAGAGTaGGGCTGGAAAGCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: LEAQTPPRVGPESMHVSSQWSEE*GWKAQS
Trigger: GGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTG...TGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGCTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp CTTGAAGCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCAGGACACATGGACAGATaGCTCTGGTCCGCCAAACTC +
Preference number: 2 (lower is better)
Translates to: LEAQTPPRVGPESMHVSSGHMDR*LWSAKL
Trigger: GAGTTTGGCGGACCAGAGCCATCTGTCCATGTGTCC...TGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGCTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR GCA 90 bp ATCAGGGTGACCAGGATCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACCGGAAGAGTCGATGCTaGCAAAGTATTTGCTTGTGT +
Preference number: 2 (lower is better)
Translates to: IRVTRILGAAPTVHTGHHRKSRC*QSICLC
Trigger: ACACAAGCAAATACTTTGGCAGCATCGACTCTTCCG...GTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCACCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGCAACTGACTCCTAAGTaGGCATACTTCCTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGQLTPK*AYFLPL
Trigger: CAGGGGCAGGAAGTATGCCCACTTAGGAGTCAGTTG...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGATGGACAGATGGCTCTaGTCCGCCAAACTCCTGTGG +
Preference number: 2 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRMDRWL*SAKLLW
Trigger: CCACAGGAGTTTGGCGGACCAGAGCCATCTGTCCAT...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp GGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTGCTGTAAGTATTTGCTTGTGTaGCTGCTCTGGCTGCTGCGA +
Preference number: 2 (lower is better)
Translates to: GLLEMVPEWSLAGAVSCCKYLLV*LLWLLR
Trigger: TCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTT...ACAGCAGGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR CAA 90 bp TCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTaGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAG +
Preference number: 2 (lower is better)
Translates to: SDSGSAGIWRGHFSS*SATLSRGGKDSSPK
Trigger: CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR TCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGAGCCACATCTGAGTTCTaGGAATTGGGACATAGGAGA +
Preference number: 2 (lower is better)
Translates to: MERPLQQLVSNFVQGREGATSEF*ELGHRR
Trigger: TCTCCTATGTCCCAATTCTCAGAACTCAGATGTGGC...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR TCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGATGTCTCTTCATCAGTaGCAACTGACTCCTAAGTGG +
Preference number: 2 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQMSLHQ*QLTPKW
Trigger: CCACTTAGGAGTCAGTTGTCACTGATGAAGAGACAT...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR GCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGATCGAGGCCGTATTCTaGCTAGCTTGCAATGGAGTG +
Preference number: 2 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGIEAVF*LACNGV
Trigger: CACTCCATTGCAAGCTAGGCAGAATACGGCCTCGAT...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR GCA 90 bp TCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTGCTGCCAAAGTATTTaGTTGTGTGGCTGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: SHGLLEMVPEWSLAGAVSCCQSI*LCGCSG
Trigger: GCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCA...GGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCACCTCTCATGGACTCCTaGAGATGGTCCCAGAATGGA +
Preference number: 2 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSPLMDS*RWSQNG
Trigger: TCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGG...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR CCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGACCCCACCCAGAGTTaGCCCAGAATCTATGCATGT +
Preference number: 2 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRDPTQS*PRIYAC
Trigger: ACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTC...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp ACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGGACACATGGACAGATaGCTCTGGTCCGCCAAACTC +
Preference number: 2 (lower is better)
Translates to: TPPRVGPESMHVSSSVTTGHMDR*LWSAKL
Trigger: GAGTTTGGCGGACCAGAGCCATCTGTCCATGTGTCC...AGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CCA 90 bp CATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTGCAGCCAAATGGGATCCTaGAGCACGTACTTAATCACC +
Preference number: 2 (lower is better)
Translates to: HGLLEMVPEWSLAGAVSCSQMGS*STYLIT
Trigger: GGTGATTAAGTACGTGCTCCAGGATCCCATTTGGCT...GCAGGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR TCA 90 bp CCCTCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGGCCACATCTGAGTTCTaGGAATTGGGACATAGGAGA +
Preference number: 2 (lower is better)
Translates to: PSRVRFRLSWNMERPLQQATSEF*ELGHRR
Trigger: TCTCCTATGTCCCAATTCTCAGAACTCAGATGTGGC...CTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR TCA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAATTCATCAGTGACAACTaGCTCCTAAGTGGGCATACT +
Preference number: 2 (lower is better)
Translates to: GIPPAHRGRILPSLQWSEFISDN*LLSGHT
Trigger: AGTATGCCCACTTAGGAGTCAGTTGTCACTGATGAA...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR TCA 90 bp TTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGATGTCTCTTCATCAGTaGCAACTGACTCCTAAGTGG +
Preference number: 2 (lower is better)
Translates to: LLRKEQGQGEVTRGVELGMSLHQ*QLTPKW
Trigger: CCACTTAGGAGTCAGTTGTCACTGATGAAGAGACAT...CCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR GCA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGATCGAGGCCGTATTCTaGCTAGCTTGCAATGGAGTG +
Preference number: 2 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTIEAVF*LACNGV
Trigger: CACTCCATTGCAAGCTAGGCAGAATACGGCCTCGAT...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR TCA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGTTCATCAGTGACAACTaGCTCCTAAGTGGGCATACT +
Preference number: 2 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELFISDN*LLSGHT
Trigger: AGTATGCCCACTTAGGAGTCAGTTGTCACTGATGAA...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CAA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCACCCCCGGGTCCTGCTaGGGCCTCAGGCTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCTPGSC*GLRLSS
Trigger: GGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR CAA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGACCCCCGGGTCCTGCTaGGGCCTCAGGCTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRTPGSC*GLRLSS
Trigger: GGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR GCA 72 bp AGCCAGAGCCCAAGGAGCCCGAGGCTGCGGAGCCTGTaGCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGA +
Preference number: 3 (lower is better)
Translates to: SQSPRSPRLRSL*RSASPLAAEVR
Trigger: TCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTCGGGCTCCTTGGGCTCTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 72 bp CCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTaGTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCC +
Preference number: 3 (lower is better)
Translates to: PSSRRWSSENRG*CFCMARSRSRS
Trigger: GGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 72 bp AGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTaGACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAA +
Preference number: 3 (lower is better)
Translates to: RARGSWPFRTQE*TAPSSRRWSSE
Trigger: TTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 72 bp GAGGCTGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTTaGAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAA +
Preference number: 3 (lower is better)
Translates to: EAAEPVPERESS*SRSSSRSLEPE
Trigger: TTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 72 bp AGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTaGTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGC +
Preference number: 3 (lower is better)
Translates to: SSRRWSSENRGC*FCMARSRSRSC
Trigger: GCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR TCA 72 bp CGAGTCCACGCAGCCTGCCCAGGTCTCGGAAGCGGCTaGGGAAGGCTTGCTCTTCCTTCTGTGTGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: RVHAACPGLGSG*GRLALPSVCAG
Trigger: CCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR GCA 72 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTaGTCCCTAAGAGGCCAGAGGCAGCCCCTGGATCCT +
Preference number: 3 (lower is better)
Translates to: TLLWAGLRSSAL*SLRGQRQPLDP
Trigger: AGGATCCAGGGGCTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR GCA 72 bp GTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTaGGTCTGCCTGCAGGGGATCTCCCTCAGGCACCTG +
Preference number: 3 (lower is better)
Translates to: VKSGAGKPSPES*VCLQGISLRHL
Trigger: CAGGTGCCTGAGGGAGATCCCCTGCAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR GCA 72 bp ACAGATGGCTCTGGTCCGCCAAACTCCTGTGGGCACTaGCAGCCTAGGCATTCCTCCTGCCCATCGAGGCCG +
Preference number: 3 (lower is better)
Translates to: TDGSGPPNSCGH*QPRHSSCPSRP
Trigger: CGGCCTCGATGGGCAGGAGGAATGCCTAGGCTGGCAGTGCCCACAGGAGTTTGGCGGACCAGAGCCATCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR GCA 72 bp TGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTaGTTCAGCACAGAGGTCATGTCCCTGGAGGGCACC +
Preference number: 3 (lower is better)
Translates to: CCFCMARSRSRS*FSTEVMSLEGT
Trigger: GGTGCCCTCCAGGGACATGACCTCTGTGCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 72 bp AGCCTGCCCAGGTCTCGGAAGCGGCTGAGGAAGGCTTaGTCTTCCTTCTGTGTGTGCAGGGACAGCACGGCC +
Preference number: 3 (lower is better)
Translates to: SLPRSRKRLRKA*SSFCVCRDSTA
Trigger: GGCCGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCTGGGCAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR CAA 90 bp CTGGTGCAGTTTCCTGCTGTAGGTAAGGCTGGACTGGATGAGCTCCTGCCTTCTAGCCTTGGCCCCGCCTaGGGCCTCCTCGCAGCCCTC +
Preference number: 3 (lower is better)
Translates to: LVQFPAVGKAGLDELLPSSLGPA*GLLAAL
Trigger: GAGGGCTGCGAGGAGGCCCAAGGCGGGGCCAAGGCT...AGAAGGCAGGAGCTCATCCAGTCCAGCCTTACCTACAGCAGGAAACTGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR CCA 72 bp GGTGATGGGGGTCCGGCCCCCTATGGTGGGAGAAGCTaGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCT +
Preference number: 3 (lower is better)
Translates to: GDGGPAPYGGRS*GSFPLVGLATS
Trigger: AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACCCCCATCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR CCA 72 bp GCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATaGCTCGGAGCCGCTCCCGATCCTGCTTCAGCACAG +
Preference number: 3 (lower is better)
Translates to: AGPQKTEAAASA*LGAAPDPASAQ
Trigger: CTGTGCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR CCA 72 bp TCCACACAGGCCATCACATCAAGAGCCCGAGGCAGTTaGCCCTTCCGGACCCAGGAGTGCACAGCACCCAGT +
Preference number: 3 (lower is better)
Translates to: STQAITSRARGS*PFRTQECTAPS
Trigger: ACTGGGTGCTGTGCACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGTGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR TCA 72 bp CAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTaGGTCCTGCGTCTGCCTGCAGGGGATCTCCCTCAG +
Preference number: 3 (lower is better)
Translates to: QWSEEWGWKAQS*VLRLPAGDLPQ
Trigger: CTGAGGGAGATCCCCTGCAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR CCA 72 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTaGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGG +
Preference number: 3 (lower is better)
Translates to: SSPKVGGDTPLG*AAEFCSLLPKR
Trigger: CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR CCA 72 bp CTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTaGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGT +
Preference number: 3 (lower is better)
Translates to: LCPGEGRIPLQR*EVTLLWAGLRS
Trigger: ACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR CCA 72 bp CCTAGGCAGGGCCTAGTGGTGGAAGCAACACCAGCCTaGGTCCCTGGAGCAGAAACACCTCCCTTAAGACCC +
Preference number: 3 (lower is better)
Translates to: PRQGLVVEATPA*VPGAETPPLRP
Trigger: GGGTCTTAAGGGAGGTGTTTCTGCTCCAGGGACCCAGGCTGGTGTTGCTTCCACCACTAGGCCCTGCCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR CAA 90 bp GAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAAGAGCCCGAGGCAGTaGGCCCTTCCGGACCCAGGA +
Preference number: 3 (lower is better)
Translates to: ESLSWTPGDGPRMESSWCKSPRQ*ALPDPG
Trigger: TCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTT...GCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR CCA 72 bp AGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTaGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTA +
Preference number: 3 (lower is better)
Translates to: RIPLQRWEVTLL*AGLRSSALCSL
Trigger: TAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR CCA 72 bp GGCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATaGACAGATGGCTCTGGTCCGCCAAACTCCTGTGGG +
Preference number: 3 (lower is better)
Translates to: GRWRKQGESMDT*TDGSGPPNSCG
Trigger: CCCACAGGAGTTTGGCGGACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CAA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGACAGCACGGCCTaGGTCAGCCCCACTGGACGG +
Preference number: 3 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTRDSTA*VSPTGR
Trigger: CCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCCT...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR CAA 90 bp CTGGTGCAGTTTCCTGCTGTAGGTAAGGCTGGACTGGATGAGCTCCTGCCTTCTGGAGCGCGAGTCCTCTaGCAGCAGAAGTTCGAGCAG +
Preference number: 3 (lower is better)
Translates to: LVQFPAVGKAGLDELLPSGARVL*QQKFEQ
Trigger: CTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCC...AGAAGGCAGGAGCTCATCCAGTCCAGCCTTACCTACAGCAGGAAACTGCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR-3UTR CAA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGAGCTTGTCAGCAACTTaGTCCAGGGGAGGGAAGGAT +
Preference number: 3 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWSLSAT*SRGGKD
Trigger: ATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCT...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR CAA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGGTGGTGCTGGGGAGGTaGCAGCTCTCCAGGTACCTG +
Preference number: 3 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTVVLGR*QLSRYL
Trigger: CAGGTACCTGGAGAGCTGCAACCTCCCCAGCACCAC...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR TCA 72 bp AGTCCATCCAGCTCTGAGAAGAGTGGGTCATCAGGGTaGCCAGGATCTTGGGTGCTGCTCCCACAGTCCACA +
Preference number: 3 (lower is better)
Translates to: SPSSSEKSGSSG*PGSWVLLPQST
Trigger: TGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCACCCTGATGACCCACTCTTCTCAGAGCTGGATGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 72 bp TTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTaGAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGT +
Preference number: 3 (lower is better)
Translates to: FLLPIEAVFCLA*NGVKSGAGKPS
Trigger: ACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CAA 90 bp CTTGAAGCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCAGCGGCTGAGGAAGGCTaGCTCTTCCTTCTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: LEAQTPPRVGPESMHVSSAAEEG*LFLLCV
Trigger: CACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGC...TGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGCTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR CCA 72 bp TCGGAAGAGTCGATGCTGCCAAAGTATTTGCTTGTGTaGCTGCTCTGGCTGCTGCGAGTGATGCTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: SEESMLPKYLLV*LLWLLRVMLAE
Trigger: CTCAGCCAGCATCACTCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCATCGACTCTTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR CCA 72 bp TGGTCAGCATTGGCCATGAGCAGCCAAATGGGATCCTaGAGCACGTACTTAATCACCTGGTCCCCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: WSALAMSSQMGS*STYLITWSPGS
Trigger: TGAGCCTGGGGACCAGGTGATTAAGTACGTGCTCCAGGATCCCATTTGGCTGCTCATGGCCAATGCTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR GCA 72 bp GGTGGGAGAGAGAGCTGTCTCCCCGCAATAAATAAGTaGAGCCCCAACCCTCAAGAGTCAGATTCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: GGRESCLPAINK*SPNPQESDSGS
Trigger: TGAGCCTGAATCTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACAGCTCTCTCTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR-3UTR CAA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGAGACCCCACCCAGAGTaGGCCCAGAATCTATGCATG +
Preference number: 3 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRRPHPE*AQNLCM
Trigger: CATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCT...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR TCA 72 bp CCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTaGCTCCTAAGTGGGCATACTTCCTGCCCCTGCCCC +
Preference number: 3 (lower is better)
Translates to: PRIYACLFISDN*LLSGHTSCPCP
Trigger: GGGGCAGGGGCAGGAAGTATGCCCACTTAGGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR-3UTR CAA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAATGATGATGTCTTTCTaGGTCCCCACAGAGACTGGA +
Preference number: 3 (lower is better)
Translates to: GIPPAHRGRILPSLQWSEMMMSF*VPTETG
Trigger: TCCAGTCTCTGTGGGGACCAAGAAAGACATCATCAT...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
3UTR-3UTR CAA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGCGTATTCTGCCTAGCTaGCAATGGAGTGAAGAGTGG +
Preference number: 3 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTRILPS*QWSEEW
Trigger: CCACTCTTCACTCCATTGCAAGCTAGGCAGAATACG...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR TCA 72 bp GAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTaGCAACTGACTCCTAAGTGGGCATACTTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: ELAQNLCMSLHQ*QLTPKWAYFLP
Trigger: GGGCAGGAAGTATGCCCACTTAGGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR CCA 72 bp TCTGAGAATTGGGACATAGGAGAAGAAAGCCTCTCATaGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGC +
Preference number: 3 (lower is better)
Translates to: SENWDIGEESLS*TPGDGPRMESS
Trigger: GCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTCTTCTCCTATGTCCCAATTCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR TCA 72 bp AGTTTCCCACTGGTTGGTCTAGCCACATCTGAGTTCTaGGAATTGGGACATAGGAGAAGAAAGCCTCTCATG +
Preference number: 3 (lower is better)
Translates to: SFPLVGLATSEF*ELGHRRRKPLM
Trigger: CATGAGAGGCTTTCTTCTCCTATGTCCCAATTCTCAGAACTCAGATGTGGCTAGACCAACCAGTGGGAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGTGGTGTCGGCGGCTTaGGGGTGCGGGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWVVSAA*GCGAVV
Trigger: CACCACGGCCCCGCACCCCCAAGCCGCCGACACCAC...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GCCCAAGCCAGAGCCCAAGGAGCCCGAGGCTGCGGAGCCTGTGCCGGAGCGCGAGGGTCCGGCCCCCTATaGTGGGAGAAGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AQARAQGARGCGACAGARGSGPL*WEKLGQ
Trigger: CTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACCC...TCGCGCTCCGGCACAGGCTCCGCAGCCTCGGGCTCCTTGGGCTCTGGCTTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGTCCCAGAGCGGCCCTTaGCCCGGCGCTCTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRSQSGP*PGALAA
Trigger: TGCCGCCAGAGCGCCGGGGCAAGGGCCGCTCTGGGA...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGCAAGGCCGGTGCTGTaGGGGCCCAGGGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWARPVL*GPRGWD
Trigger: GTCCCATCCCCTGGGCCCCCACAGCACCGGCCTTGC...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGCAGCAGCCTCCGCACTaGGAGGTGGGGGCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRQQPPH*EVGARH
Trigger: GTGCCGGGCCCCCACCTCCCAGTGCGGAGGCTGCTG...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGAGGAGAGTCCGGGCGGTaGGGAGGACTCGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGGESGR*GGLGAR
Trigger: CCTCGCCCCGAGTCCTCCTCACCGCCCGGACTCTCC...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCCCAAGCCAGAGCCCAAGGAGCCCGAGGCTGCGGAGCCTGTGCCGGAGCGCGATCTGGCTGCTGCGAGTaGTGCTGGCTGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AQARAQGARGCGACAGARSGCCE*CWLRCC
Trigger: GCAGCACCTCAGCCAGCATCACTCGCAGCAGCCAGA...TCGCGCTCCGGCACAGGCTCCGCAGCCTCGGGCTCCTTGGGCTCTGGCTTGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGCGAGCGGGCTCAGGGTaGCTCCCACCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWRAGSG*LPPLAP
Trigger: AGGAGCCAGTGGTGGGAGGCACCCTGAGCCCGCTCG...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGCCCCTGTGCCCCAGGTaGGCAGGCGAGATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWPLCPR*AGEMEQ
Trigger: CTGCTCCATCTCGCCTGCCCACCTGGGGCACAGGGG...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGTGGGGCTGGGGCTGTaGACGGGCTGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRVGLGL*TGCSSS
Trigger: GCTGCTGCTGCAGCCCGTCCACAGCCCCAGCCCCAC...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGGTGCCTCCCACCACTaGCTCCTTCCGTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWGASHH*LLPWGG
Trigger: GCCACCCCACGGAAGGAGCCAGTGGTGGGAGGCACC...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGGGGGTAGTGGCTGGTaGGGTGGGCCAGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRGGSGW*GGPGGG
Trigger: TCCACCCCCTGGCCCACCCCACCAGCCACTACCCCC...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
70% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCCGCACTGGGAGGTaGGGGCCCGGCACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGLRTGR*GPGTAP
Trigger: GGGAGCAGTGCCGGGCCCCCACCTCCCAGTGCGGAG...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCCCAAGCCAGAGCCCAAGGAGCCCGAGGCTGCGGAGCCTGTGCCGGAGCGCGAAGCTGGTGTCCATGGTaGCATACTCCCCGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: AQARAQGARGCGACAGARSWCPW*HTPRCG
Trigger: CCCGCAACGGGGAGTATGTCACCATGGACACCAGCT...TCGCGCTCCGGCACAGGCTCCGCAGCCTCGGGCTCCTTGGGCTCTGGCTTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGTCCCAGAGCGGCCCTTaGCCCGGCGCTCTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQSQSGP*PGALAA
Trigger: TGCCGCCAGAGCGCCGGGGCAAGGGCCGCTCTGGGA...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGCAGGCCAGTGCGTACTaGAGCGTGGCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWQASAY*SVARVP
Trigger: TGGGACCCTGGCCACGCTGCAGTACGCACTGGCCTG...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GCCCAAGCCAGAGCCCAAGGAGCCCGAGGCTGCGGAGCCTGTGCCGGAGCGCGACTTGACACAGGCCAGTaGGTACTGCAGCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AQARAQGARGCGACAGARLDTGQ*VLQRGQ
Trigger: CTGGCCACGCTGCAGTACGCACTGGCCTGTGTCAAG...TCGCGCTCCGGCACAGGCTCCGCAGCCTCGGGCTCCTTGGGCTCTGGCTTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GCCGCCACCGCTGCTGCCCTGCTCGCCTCCACCCTCTTCCATGGGCTCCAGCCCGGTCGGTCCTCAGGATaGAGGAACAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: AATAAALLASTLFHGLQPGRSSG*RNRSTG
Trigger: CCCAGTGCTCCTGTTCCTGCATCCTGAGGACCGACC...GGGCTGGAGCCCATGGAAGAGGGTGGAGGCGAGCAGGGCAGCAGCGGTGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGAGAGTCCCGTGGGGCTaGGGCTGTGGACGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRRVPWG*GCGRAA
Trigger: TGCAGCCCGTCCACAGCCCCAGCCCCACGGGACTCT...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGCTGTGGAGAGGGCCTaGGGATGTCACGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRAVERA*GCHGAD
Trigger: GTCGGCGCCGTGACATCCCCAGGCCCTCTCCACAGC...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGGCGGGGAAAGCAGCTaGGGGCACAGATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWGGESS*GHRCGS
Trigger: GCTCCCACATCTGTGCCCCCAGCTGCTTTCCCCGCC...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGCCTGGGCAAGGCCGGTaGTGTGGGGGCCCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQPGQGR*CGGPGD
Trigger: ATCCCCTGGGCCCCCACAGCACCGGCCTTGCCCAGG...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCACCTGGGCAAGGCCGGTaGTGTGGGGGCCCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEAPGQGR*CGGPGD
Trigger: ATCCCCTGGGCCCCCACAGCACCGGCCTTGCCCAGG...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTATCCCAGAGCGGCCCTTaGCCCGGCGCTCTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLSQSGP*PGALAA
Trigger: TGCCGCCAGAGCGCCGGGGCAAGGGCCGCTCTGGGA...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACGAGTCCACGCAGCCTaGCCAGGTCTCGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGRVHAA*PGLGSG
Trigger: GCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCG...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTGAGGGAGCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGAGCAAGGCCGGTGCTGTaGGGGCCCAGGGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: LRELWKSCRVHAACPGLGARPVL*GPRGWD
Trigger: GTCCCATCCCCTGGGCCCCCACAGCACCGGCCTTGC...TCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGATGTCATCGGCCAGGCTaGGGCCTGGGCAAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGCHRPG*GLGKAG
Trigger: ACCGGCCTTGCCCAGGCCCCAGCCTGGCCGATGACA...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGCTTGCCCCGGCGCTCTaGCGGCAGTCGAAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRLAPAL*RQSKLE
Trigger: CTCAAGCTTCGACTGCCGCCAGAGCGCCGGGGCAAG...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGAGTGCACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGGTGGGGCTGGGGCTGTaGACGGGCTGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GVHSTQFPPLVLRKPRLLVGLGL*TGCSSS
Trigger: GCTGCTGCTGCAGCCCGTCCACAGCCCCAGCCCCAC...CAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGACACTGGCTCCTTCCGTaGGGTGGCCCCCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERHWLLP*GGPLPR
Trigger: TCTGGGGAGGGGGCCACCCCACGGAAGGAGCCAGTG...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGCCCGAGGGTTCTGGTaGTGGCGTGAGCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRARGFW*WRERLA
Trigger: AGCCAAGCGCTCACGCCACCACCAGAACCCTCGGGC...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGTCAGCCCGAGGGTTCTaGTGGTGGCGTGAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWSARGF*WWRERL
Trigger: CAAGCGCTCACGCCACCACCAGAACCCTCGGGCTGA...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGGGCTGGACAACCGCTaGGAAGGGGGTAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRGLDNR*EGGSGW
Trigger: CCAGCCACTACCCCCTTCCCAGCGGTTGTCCAGCCC...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGGCGGGGAAAGCAGCTaGGGGCACAGATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRGGESS*GHRCGS
Trigger: GCTCCCACATCTGTGCCCCCAGCTGCTTTCCCCGCC...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCCGCACTGGGAGGTaGGGGCCCGGCACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSALRTGR*GPGTAP
Trigger: GGGAGCAGTGCCGGGCCCCCACCTCCCAGTGCGGAG...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGCAGCAGCCTCCGCACTaGGAGGTGGGGGCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKQQPPH*EVGARH
Trigger: GTGCCGGGCCCCCACCTCCCAGTGCGGAGGCTGCTG...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGGCCTTGGCCCCGCCTTaGGCCTCCTCGCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQALAPP*ASSQPS
Trigger: AGAGGGCTGCGAGGAGGCCCAAGGCGGGGCCAAGGC...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGCCTTGGCCCCGCCTTaGGCCTCCTCGCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEAALAPP*ASSQPS
Trigger: AGAGGGCTGCGAGGAGGCCCAAGGCGGGGCCAAGGC...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCTGGGGGCCGGGGGAGTaGACACGTCCTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLWGPGE*TRPHSG
Trigger: CCCTGAATGAGGACGTGTTCACTCCCCCGGCCCCCA...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTGCGTAGGCGGGGCCGGGACTaGGGCCGGGCCCGAGACTCA +
Preference number: 4 (lower is better)
Translates to: ASPLAAEVRAGHWSRKVRRRGRD*GRARDS
Trigger: TGAGTCTCGGGCCCGGCCTCAGTCCCGGCCCCGCCT...ACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCTGGATCCTAGGCTGGTaGTGGGGGTCCGGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLWILGW*WGSGPL
Trigger: TAGGGGGCCGGACCCCCATCACCAGCCTAGGATCCA...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGTGGTTGGCCTGCACCTaGTTGACACAGGCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWWLACT*LTQASA
Trigger: CGCACTGGCCTGTGTCAAGCAGGTGCAGGCCAACCA...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGCGAGTCCACGCAGCCTaGCCAGGTCTCGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: CPCPQARPEVAYLETAPLRVHAA*PGLGSG
Trigger: GCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCG...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp TGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCCGAGTCCACGCAGCCTaGCCAGGTCTCGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: CGACAGARVLLQQKFEQVRVHAA*PGLGSG
Trigger: GCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCG...GACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGTTCCGGACCCAGGAGTaGACAGCACCCAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRFRTQE*TAPSSR
Trigger: GCGGGAACTGGGTGCTGTGCACTCCTGGGTCCGGAA...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGGCAAGGCCGGTGCTGTaGGGGCCCAGGGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRARPVL*GPRGWD
Trigger: GTCCCATCCCCTGGGCCCCCACAGCACCGGCCTTGC...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCAAGGCCGGTGCTGTaGGGGCCCAGGGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: VPAAGPQKTEAAASAWLGARPVL*GPRGWD
Trigger: GTCCCATCCCCTGGGCCCCCACAGCACCGGCCTTGC...TCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp AACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGCTGTCATCGGCCAGGCTaGGGCCTGGGCAAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: NRGCCFCMARSRSRSCFSCHRPG*GLGKAG
Trigger: ACCGGCCTTGCCCAGGCCCCAGCCTGGCCGATGACA...GCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCCTTGCCCCGGCGCTCTaGCGGCAGTCGAAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLLAPAL*RQSKLE
Trigger: CTCAAGCTTCGACTGCCGCCAGAGCGCCGGGGCAAG...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGGTGGGGCTGGGGCTGTaGACGGGCTGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQVGLGL*TGCSSS
Trigger: GCTGCTGCTGCAGCCCGTCCACAGCCCCAGCCCCAC...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CTGAGGGAGCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGAAGAGTCCCGTGGGGCTaGGGCTGTGGACGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LRELWKSCRVHAACPGLGRVPWG*GCGRAA
Trigger: TGCAGCCCGTCCACAGCCCCAGCCCCACGGGACTCT...TCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp GGAGTGCACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCACTGGCTCCTTCCGTaGGGTGGCCCCCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GVHSTQFPPLVLRKPRLLHWLLP*GGPLPR
Trigger: TCTGGGGAGGGGGCCACCCCACGGAAGGAGCCAGTG...CAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCGGTGCGGGGCCGTGGTaGCAGCCTCGCTCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFGAGPW*QPRSPR
Trigger: CCTTGGCGAGCGAGGCTGCCACCACGGCCCCGCACC...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317276.9
CDS-3UTR CCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGTGAGCGCTTGGCTTTaGATCGGCAGTGGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWVSAWL*IGSGVG
Trigger: GCCGACACCACTGCCGATCCAAAGCCAAGCGCTCAC...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCAGAGCCCGAGGCAGTTaGCCCTTCCGGACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLRARGS*PFRTQE
Trigger: CTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCT...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGGGGTCCGGCCCCCTATaGTGGGAGAAGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQGSGPL*WEKLGQ
Trigger: CTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACCC...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
3UTR CAA 72 bp CGAGGCTGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTaGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: RGCGACAGARVL*QQKFEQVTGAG
Trigger: TCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGAAGTCCTTGCCCGGGCTaGCTGTTCACTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGSPCPG*LFTAAA
Trigger: GGCTGCAGCAGTGAACAGTCAGCCCGGGCAAGGACT...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCATGGGGGCCGGGGGAGTaGACACGTCCTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEAWGPGE*TRPHSG
Trigger: CCCTGAATGAGGACGTGTTCACTCCCCCGGCCCCCA...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGAGGCGGGGCCGGGACTaGGGCCGGGCCCGAGACTCA +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQRRGRD*GRARDS
Trigger: TGAGTCTCGGGCCCGGCCTCAGTCCCGGCCCCGCCT...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR TCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGATTGGAGGACTCAGTaGCCTCCGCCAGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRDWRTQ*PPPVWP
Trigger: AGGCCAGACTGGCGGAGGTCACTGAGTCCTCCAATC...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGAGCGAGTGATGCTGGCTaGGGTGCTGCCCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGASDAG*GAAPFM
Trigger: CATGAAGGGGGCAGCACCTCAGCCAGCATCACTCGC...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp TGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCTGGATCCTAGGCTGGTaGTGGGGGTCCGGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: CGACAGARVLLQQKFEQVWILGW*WGSGPL
Trigger: TAGGGGGCCGGACCCCCATCACCAGCCTAGGATCCA...GACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGAGCAGGGCTGAGTCCTTaGCGTTGCCTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGAGLSP*RCLRRS
Trigger: GCTCCTCCTCAGGCAACGGCAAGGACTCAGCCCTGC...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCGTGGGGGCCCGGCACTaGTCCCAGGGCCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFVGARH*SQGLLQ
Trigger: TTGCAGGAGGCCCTGGGAGCAGTGCCGGGCCCCCAC...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTCACTGCCGCCACCGCTaGTGCCCTGCTCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWAHCRHR*CPARLH
Trigger: GTGGAGGCGAGCAGGGCAGCAGCGGTGGCGGCAGTG...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAATGTCATCGGCCAGGCTaGGGCCTGGGCAAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RNKARERLHEGSSWGCAECHRPG*GLGKAG
Trigger: ACCGGCCTTGCCCAGGCCCCAGCCTGGCCGATGACA...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGAGGCAATGGAACTGCTaGGTGGGGATGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWRQWNC*VGMGSE
Trigger: CTCAGAGCCCATCCCCACCCAGCAGTTCCATTGCCT...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGGAGGCTGTAGGCAATaGAACTGCTGGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWGGCRQ*NCWVGM
Trigger: CATCCCCACCCAGCAGTTCCATTGCCTACAGCCTCC...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GCCGCCACCGCTGCTGCCCTGCTCGCCTCCACCCTCTTCCATGGGCTCCAGCCCTGCTCTGACAGCTCCTaGATATCAGTGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AATAAALLASTLFHGLQPCSDSS*ISVSRE
Trigger: CTCCCTGGACACTGATATCCAGGAGCTGTCAGAGCA...GGGCTGGAGCCCATGGAAGAGGGTGGAGGCGAGCAGGGCAGCAGCGGTGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCAGAGTCCCGTGGGGCTaGGGCTGTGGACGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCRVPWG*GCGRAA
Trigger: TGCAGCCCGTCCACAGCCCCAGCCCCACGGGACTCT...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAAGCTGTGGAGAGGGCCTaGGGATGTCACGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: RNKARERLHEGSSWGCAEAVERA*GCHGAD
Trigger: GTCGGCGCCGTGACATCCCCAGGCCCTCTCCACAGC...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGATCTGGGTCTGGGGATTaGCAGGGAAGGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERSGSGD*QGRALA
Trigger: GGCCAAGGCCCTTCCCTGCCAATCCCCAGACCCAGA...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGAAGGCTAGTGGGGCCTaGACGGGAGCAGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQKASGA*TGAEPA
Trigger: GGCGGGTTCTGCTCCCGTCCAGGCCCCACTAGCCTT...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAAGGTGCCTCCCACCACTaGCTCCTTCCGTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RNKARERLHEGSSWGCAEGASHH*LLPWGG
Trigger: GCCACCCCACGGAAGGAGCCAGTGGTGGGAGGCACC...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR CCA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTGGTGCCTCCCACCACTaGCTCCTTCCGTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSAGASHH*LLPWGG
Trigger: GCCACCCCACGGAAGGAGCCAGTGGTGGGAGGCACC...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGACACTCTCCGCCTTATTaGCCAGGGCGAGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERHSPPY*PGRAGS
Trigger: TGAGCCCGCTCGCCCTGGCCAATAAGGCGGAGAGTG...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTGAGGGAGCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGACTTGGTCAGCCCCACTaGACGGTAGGCGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LRELWKSCRVHAACPGLGLGQPH*TVGVWG
Trigger: GCCCCAGACGCCTACCGTCCAGTGGGGCTGACCAAG...TCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp TGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCCTTGGTCAGCCCCACTaGACGGTAGGCGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CGACAGARVLLQQKFEQVLGQPH*TVGVWG
Trigger: GCCCCAGACGCCTACCGTCCAGTGGGGCTGACCAAG...GACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGGGGACAGCACGGCCTTaGTCAGCCCCACTGGACGGT +
Preference number: 4 (lower is better)
Translates to: CPCPQARPEVAYLETAPLGTARP*SAPLDG
Trigger: ACCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCC...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGAGCTTTGGATCGGCAGTaGTGTCGGCGGCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERALDRQ*CRRLGG
Trigger: ACCCCCAAGCCGCCGACACCACTGCCGATCCAAAGC...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACACTCCTCTGGGCTaGGCTGCGGAGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRDTPLG*AAEFCS
Trigger: AGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTC...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp CCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGGCCTGGAGGCTTGGCTaGGGGAGTGAGGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PPLVLRKPRLLLLHGSEPAWRLG*GSEVED
Trigger: ATCTTCCACCTCACTCCCTCAGCCAAGCCTCCAGGC...CGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGTGCAGGGGCCCCATCTaGGACCCGGATCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: CPCPQARPEVAYLETAPLCRGPI*DPDLGH
Trigger: GTGACCAAGATCCGGGTCTCAGATGGGGCCCCTGCA...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp AACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGCTGCAGGGGCCCCATCTaGGACCCGGATCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: NRGCCFCMARSRSRSCFSCRGPI*DPDLGH
Trigger: GTGACCAAGATCCGGGTCTCAGATGGGGCCCCTGCA...GCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGAAGCTGGTGTCCATGGTaGCATACTCCCCGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERSWCPW*HTPRCG
Trigger: CCCGCAACGGGGAGTATGTCACCATGGACACCAGCT...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCCCCAGACAGCGCTGCTaGCGGCGGATCTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLPRQRC*RRIFLG
Trigger: ACCAAGAAAGATCCGCCGTCAGCAGCGCTGTCTGGG...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGTCTGGCTGCTGCGAGTaGTGCTGGCTGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQSGCCE*CWLRCC
Trigger: GCAGCACCTCAGCCAGCATCACTCGCAGCAGCCAGA...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGCAGTCCATCCAGCTCTaGGAAGAGTGGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWQSIQL*EEWVIR
Trigger: CCTGATGACCCACTCTTCTCAGAGCTGGATGGACTG...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGGCAGGGCTGAGTCCTTaGCGTTGCCTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CPCPQARPEVAYLETAPLAGLSP*RCLRRS
Trigger: GCTCCTCCTCAGGCAACGGCAAGGACTCAGCCCTGC...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGCCTTGACACAGGCCAGTaGGTACTGCAGCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: APAPRLGLKSLTWRQHLCLDTGQ*VLQRGQ
Trigger: CTGGCCACGCTGCAGTACGCACTGGCCTGTGTCAAG...GCAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGACGCAGCAGGACGGCTaGCTGCTCCGAAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRTQQDG*LLRNVD
Trigger: GTCTACATTTCGGAGCAGGCAGCCGTCCTGCTGCGT...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317276.9
CDS-3UTR GCA 90 bp GGAGTGCACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGTTGCGGCTCCAGGGGTaGACAAAGCCAGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GVHSTQFPPLVLRKPRLLLRLQG*TKPAQL
Trigger: CAGCTGGGCTGGCTTTGTGCACCCCTGGAGCCGCAA...CAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGTCTTCCTTCTGTGTGTaGAGGGACAGCACGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWSSFCV*RDSTAL
Trigger: CAAGGCCGTGCTGTCCCTGCACACACAGAAGGAAGA...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTACGAGGCTGCTGCTTCTaGATGGCTCGGAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLRGCCF*MARSRS
Trigger: GGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCG...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGTCAGAAAACCGAGGCTaGTGCTTCTGCATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWSENRG*CFCMAR
Trigger: CCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGA...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAACTTGCCCCGGCGCTCTaGCGGCAGTCGAAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PERESSCSRSSSRSLEPELAPAL*RQSKLE
Trigger: CTCAAGCTTCGACTGCCGCCAGAGCGCCGGGGCAAG...TTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp ATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTGCACAGCACCCCTGTGCCCCAGGTaGGCAGGCGAGATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ITSRARGSWPFRTQECTAPLCPR*AGEMEQ
Trigger: CTGCTCCATCTCGCCTGCCCACCTGGGGCACAGGGG...TGCTGTGCACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAAAGCGGATAGGGGAGTaGTCAAAGGGCTGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEAKRIGE*SKGWPA
Trigger: GGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTT...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCGCCGTGCGTACTTTGTaGCGGCCCAACACGAAGGCT +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLAVRTL*RPNTKA
Trigger: AGCCTTCGTGTTGGGCCGCCACAAAGTACGCACGGC...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCAGAGTCCCGTGGGGCTaGGGCTGTGGACGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFRVPWG*GCGRAA
Trigger: TGCAGCCCGTCCACAGCCCCAGCCCCACGGGACTCT...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGAGCCCGAGGCGCTGTGGAGAGGGCCTaGGGATGTCACGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: SWVLLPQSTQAITSRARGAVERA*GCHGAD
Trigger: GTCGGCGCCGTGACATCCCCAGGCCCTCTCCACAGC...GCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GGAGAAGCTAGCGAGGGGCCTGTCCCTAGGCAGGGCCTAGTGGTGGAAGCAACAAAGGCTAGTGGGGCCTaGACGGGAGCAGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: GEASEGPVPRQGLVVEATKASGA*TGAEPA
Trigger: GGCGGGTTCTGCTCCCGTCCAGGCCCCACTAGCCTT...TGTTGCTTCCACCACTAGGCCCTGCCTAGGGACAGGCCCCTCGCTAGCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp CGAGGCTGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGGGTCCCCACAGAGACTaGACCTGTCCTCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RGCGACAGARVLLQQKFEGPHRD*TCPLPV
Trigger: GACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACC...CTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGTGCCTCCCACCACTaGCTCCTTCCGTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWAGASHH*LLPWGG
Trigger: GCCACCCCACGGAAGGAGCCAGTGGTGGGAGGCACC...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTACTTGGTCAGCCCCACTaGACGGTAGGCGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLLGQPH*TVGVWG
Trigger: GCCCCAGACGCCTACCGTCCAGTGGGGCTGACCAAG...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTGTGGTGTCGGCGGCTTaGGGGTGCGGGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSVVSAA*GCGAVV
Trigger: CACCACGGCCCCGCACCCCCAAGCCGCCGACACCAC...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCCGAGGGTTCTGGTaGTGGCGTGAGCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLARGFW*WRERLA
Trigger: AGCCAAGCGCTCACGCCACCACCAGAACCCTCGGGC...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGTGCGAGGCAGGAGTaGGAGGCCCTTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQSARQE*EALQQG
Trigger: CCCCTGCTGAAGGGCCTCCCACTCCTGCCTCGCACT...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGAGTGCGAGGCAGGAGTaGGAGGCCCTTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRSARQE*EALQQG
Trigger: CCCCTGCTGAAGGGCCTCCCACTCCTGCCTCGCACT...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGGAGAGCTTGAAGCCTTaGCCCCGCCTTGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQESLKP*PRLGPP
Trigger: AGGAGGCCCAAGGCGGGGCCAAGGCTTCAAGCTCTC...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GCCGCCACCGCTGCTGCCCTGCTCGCCTCCACCCTCTTCCATGGGCTCCAGCCCGAGATGGTCCCAGAATaGAGTCTAGCTGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: AATAAALLASTLFHGLQPEMVPE*SLAGAV
Trigger: AACTGCACCAGCTAGACTCCATTCTGGGACCATCTC...GGGCTGGAGCCCATGGAAGAGGGTGGAGGCGAGCAGGGCAGCAGCGGTGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAAGAGCAGCTAGGGGCTaGAACCCCCGGGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEARAARG*NPRVLL
Trigger: AAGCAGGACCCGGGGGTTCCAGCCCCTAGCTGCTCT...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGACAGCTGAGAACGCCTaGGTCCCACCTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQTAENA*VPPEGQ
Trigger: CTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGT...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
3UTR CAA 72 bp CAGCCTGCCCAGGTCTCGGAAGCGGCTGAGGAAGGCTaGCTCTTCCTTCTGTGTGTGCAGGGACAGCACGGC +
Preference number: 4 (lower is better)
Translates to: QPAQVSEAAEEG*LFLLCVQGQHG
Trigger: GCCGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCTGGGCAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp AGGGCTGAGGGAGCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTGCCTGGAGGCTTGGCTaGGGGAGTGAGGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RAEGAVEELSSPRSLPRSAWRLG*GSEVED
Trigger: ATCTTCCACCTCACTCCCTCAGCCAAGCCTCCAGGC...AGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCCTGTGTGAGCTCCGCTaGGATGCGCCTCTAGACTCA +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLLCELR*DAPLDS
Trigger: TGAGTCTAGAGGCGCATCTCAGCGGAGCTCACACAG...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGAGCGGCAGTCGAAGCTTaGGCTCTCGAAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGAAVEA*ALEVLS
Trigger: TGACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGC...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGTGCAGGGGCCCCATCTaGGACCCGGATCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKCRGPI*DPDLGH
Trigger: GTGACCAAGATCCGGGTCTCAGATGGGGCCCCTGCA...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGTGGGGGCCGGGGGAGTaGACACGTCCTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVWGPGE*TRPHSG
Trigger: CCCTGAATGAGGACGTGTTCACTCCCCCGGCCCCCA...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp CGAGGCTGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGAGCTACACTGACTGGTaGCGGACACCACACTCTCCG +
Preference number: 4 (lower is better)
Translates to: RGCGACAGARVLLQQKFESYTDW*RTPHSP
Trigger: CGGAGAGTGTGGTGTCCGTCACCAGTCAGTGTAGCT...CTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTCG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCGGAGAGTCCGGGCGGTaGGGAGGACTCGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLGESGR*GGLGAR
Trigger: CCTCGCCCCGAGTCCTCCTCACCGCCCGGACTCTCC...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGACCGGAAAGTGCGTCCTaGTTGGAGGACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERPESAS*LEDSVT
Trigger: GGTCACTGAGTCCTCCAATCAGGACGCACTTTCCGG...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCCCGGAAAGTGCGTCCTaGTTGGAGGACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLPESAS*LEDSVT
Trigger: GGTCACTGAGTCCTCCAATCAGGACGCACTTTCCGG...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp AAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGGCGAGTGATGCTGGCTaGGGTGCTGCCCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: KPRLLLLHGSEPLPILLQASDAG*GAAPFM
Trigger: CATGAAGGGGGCAGCACCTCAGCCAGCATCACTCGC...CTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCCCTGGTAGGTCATCATaGCGCGCTGGTCAGCATTGG +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLPGRSS*RAGQHW
Trigger: CCAATGCTGACCAGCGCGTCATGATGACCTACCAGG...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGAAGTGGGTCATCAGGGTaGCCAGGATCTTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERSGSSG*PGSWVL
Trigger: CAGCACCCAAGATCCTGGTCACCCTGATGACCCACT...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTTCCAAAGGTGGGAGGTaGCACTCCTCTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSASKGGR*HSSGLG
Trigger: GCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGA...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp CTGAGGGAGCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGATGGAAAGCCCAGTCCTaGGTCCTGCGTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LRELWKSCRVHAACPGLGWKAQS*VLRLPA
Trigger: TGCAGGCAGACGCAGGACTCAGGACTGGGCTTTCCA...TCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGGTGGACGGGTTGTCCTaGTCTGAGCTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQVDGLS*SELALR
Trigger: CCTGAGTGCCAGCTCAGAGCAGGACAACCCGTCCAC...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GGAGTGCACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGGGGCTGACTGTTCACTaGTGCAGCCACTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: GVHSTQFPPLVLRKPRLLGLTVH*CSHWWT
Trigger: CGTCCACCAGTGGCTGCAGCAGTGAACAGTCAGCCC...CAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp ATGATGTCTTTCTTGGTCCCCACAGAGACTGGACCTGTCCTCTGCCTGTCGTCGTCCCAGAGCGGCCCTTaGCCCGGCGCTCTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: MMSFLVPTETGPVLCLSSSQSGP*PGALAA
Trigger: TGCCGCCAGAGCGCCGGGGCAAGGGCCGCTCTGGGA...CGACGACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACCAAGAAAGACATCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGCTTGACACAGGCCAGTaGGTACTGCAGCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQLDTGQ*VLQRGQ
Trigger: CTGGCCACGCTGCAGTACGCACTGGCCTGTGTCAAG...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTGGAACACGTCCCGCTTaGAACGCAGCAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSAGTRPA*NAAGRL
Trigger: CAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCC...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GGAGAAGCTAGCGAGGGGCCTGTCCCTAGGCAGGGCCTAGTGGTGGAAGCAACATTGCGGCTCCAGGGGTaGACAAAGCCAGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GEASEGPVPRQGLVVEATLRLQG*TKPAQL
Trigger: CAGCTGGGCTGGCTTTGTGCACCCCTGGAGCCGCAA...TGTTGCTTCCACCACTAGGCCCTGCCTAGGGACAGGCCCCTCGCTAGCTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGACTGCATCACCCCCGTTaGTATCACTGGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERLHHPR*YHWRTQ
Trigger: CTGGGTCCTCCAGTGATAGCAACGGGGGTGATGCAG...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGCGAGCGGGCTCAGGGTaGCTCCCACCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWRAGSG*LPPLAP
Trigger: AGGAGCCAGTGGTGGGAGGCACCCTGAGCCCGCTCG...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGCGGCTGAGGAAGGCTTaGTCTTCCTTCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRRLRKA*SSFCVC
Trigger: GCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCG...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGAAGCCGCTCCCGATCCTaGTTCAGCACAGAGGTCATG +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERSRSRS*FSTEVM
Trigger: CATGACCTCTGTGCTGAAGCAGGATCGGGAGCGGCT...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGAGCCGCTCCCGATCCTaGTTCAGCACAGAGGTCATG +
Preference number: 4 (lower is better)
Translates to: PPLVLRKPRLLLLHGSEPSRSRS*FSTEVM
Trigger: CATGACCTCTGTGCTGAAGCAGGATCGGGAGCGGCT...CGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGAGAAAACCGAGGCTGCTaGTTCTGCATGGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERENRGC*FCMARS
Trigger: GCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTC...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CGAGGCTGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGGACCAGGATCTTGGGTaGTGCTCCCACAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: RGCGACAGARVLLQQKFEDQDLG*CSHSPH
Trigger: GTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTC...CTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTCACTGCCGCCACCGCTaGTGCCCTGCTCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSHCRHR*CPARLH
Trigger: GTGGAGGCGAGCAGGGCAGCAGCGGTGGCGGCAGTG...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCTGTCATCGGCCAGGCTaGGGCCTGGGCAAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCCHRPG*GLGKAG
Trigger: ACCGGCCTTGCCCAGGCCCCAGCCTGGCCGATGACA...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGAGTGCACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGTGCTGCAGCCACTGGTaGACGGGTTGTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GVHSTQFPPLVLRKPRLLCCSHW*TGCPAL
Trigger: CAGAGCAGGACAACCCGTCCACCAGTGGCTGCAGCA...CAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GCTGGGCCTGGGGCTAGGCCAGGCAGGTCCTCCATCATGATGATGTCTTTCTTGCCCCTGTGCCCCAGGTaGGCAGGCGAGATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AGPGARPGRSSIMMMSFLPLCPR*AGEMEQ
Trigger: CTGCTCCATCTCGCCTGCCCACCTGGGGCACAGGGG...CAAGAAAGACATCATCATGATGGAGGACCTGCCTGGCCTAGCCCCAGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTCTGGTACCGAGGCCCTaGATCCCGGTCAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWALVPRP*IPVRTS
Trigger: GGAGGTCCTGACCGGGATCCAGGGCCTCGGTACCAG...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCCTGGTACCGAGGCCCTaGATCCCGGTCAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFLVPRP*IPVRTS
Trigger: GGAGGTCCTGACCGGGATCCAGGGCCTCGGTACCAG...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGGTTAGGCGGAATGGCTaGTACCGAGGCCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQVRRNG*YRGPGS
Trigger: GGATCCAGGGCCTCGGTACCAGCCATTCCGCCTAAC...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAAAGCGGATAGGGGAGTaGTCAAAGGGCTGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLKRIGE*SKGWPA
Trigger: GGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTT...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGGCCGTGCGTACTTTGTaGCGGCCCAACACGAAGGCT +
Preference number: 4 (lower is better)
Translates to: CPCPQARPEVAYLETAPLAVRTL*RPNTKA
Trigger: AGCCTTCGTGTTGGGCCGCCACAAAGTACGCACGGC...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGGTGGGGCTGGGGCTGTaGACGGGCTGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQVGLGL*TGCSSS
Trigger: GCTGCTGCTGCAGCCCGTCCACAGCCCCAGCCCCAC...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCAGAGTCCCGTGGGGCTaGGGCTGTGGACGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCRVPWG*GCGRAA
Trigger: TGCAGCCCGTCCACAGCCCCAGCCCCACGGGACTCT...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGTGGAGAGGGCCTaGGGATGTCACGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWAVERA*GCHGAD
Trigger: GTCGGCGCCGTGACATCCCCAGGCCCTCTCCACAGC...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAACTGCTGGAAAGTCACTaGCGCAGGAGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RSASPLAAEVRAGHWSRKLLESH*RRRPRP
Trigger: GGGCCTGGGCCTCCTGCGCCAGTGACTTTCCAGCAG...TTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGTCTGGGTCTGGGGATTaGCAGGGAAGGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRSGSGD*QGRALA
Trigger: GGCCAAGGCCCTTCCCTGCCAATCCCCAGACCCAGA...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTATCTGGGTCTGGGGATTaGCAGGGAAGGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLSGSGD*QGRALA
Trigger: GGCCAAGGCCCTTCCCTGCCAATCCCCAGACCCAGA...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCTCCAGCTCTGGGTCTaGGGATTGGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRLQLWV*GLAGKG
Trigger: GCCCTTCCCTGCCAATCCCCAGACCCAGAGCTGGAG...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGCACTCTCCGCCTTATTaGCCAGGGCGAGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQHSPPY*PGRAGS
Trigger: TGAGCCCGCTCGCCCTGGCCAATAAGGCGGAGAGTG...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTAGGCGTCTGGGGCTaGGTCAGGGGCTACTGTGGG +
Preference number: 4 (lower is better)
Translates to: RSASPLAAEVRAGHWSRKVGVWG*VRGYCG
Trigger: CCCACAGTAGCCCCTGACCCAGCCCCAGACGCCTAC...TTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCGGGTGGGCCAGGGGGTaGAGGGTGGCACGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLGWARG*RVARVR
Trigger: CCTCACCCGTGCCACCCTCCACCCCCTGGCCCACCC...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTGGGTGGGCCAGGGGGTaGAGGGTGGCACGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRIGWARG*RVARVR
Trigger: CCTCACCCGTGCCACCCTCCACCCCCTGGCCCACCC...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCCACCAAGGCCACCATTaGGGTCACCAAAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCHQGHH*GHQRGG
Trigger: CCCGCCCCTTTGGTGACCCCAATGGTGGCCTTGGTG...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGATCTCGAGTTGAACAGTaGAGAGTCCGGGCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGSRVEQ*RVRAVR
Trigger: CCTCACCGCCCGGACTCTCCACTGTTCAACTCGAGA...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGGTGCTGCCCCCTTCATaGGAGCCTGAACCAGACCCA +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQVLPPS*EPEPDP
Trigger: TGGGTCTGGTTCAGGCTCCCATGAAGGGGGCAGCAC...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACAGAGGTCATGTCCCTaGAGGGCACCTGGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGQRSCP*RAPGRS
Trigger: TGACCTACCAGGTGCCCTCCAGGGACATGACCTCTG...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGGCTCAGCTGGAATATaGAGAGGCCACTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRGSAGI*RGHFSS
Trigger: GCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCC...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTGCACCAGGGACTCCATaGTCCACCAACCTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSAAPGTP*STNLPH
Trigger: GTGGGGGAGGTTGGTGGACCATGGAGTCCCTGGTGC...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGCCCCAGGTGGCTACCTCGCTCGCCAAGGGCTGAGGGAGCTGTGGAAGAGCTGGAAGCAACACCAGCCTaGGTCCCTGGAGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: GPRWLPRSPRAEGAVEELEATPA*VPGAET
Trigger: TGTTTCTGCTCCAGGGACCCAGGCTGGTGTTGCTTC...CAGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGAGGTAGCCACCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp TTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGCAGGCTGCCCTCCTCTaGCTGCAGCCCGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: LRKEQGQGEVTRGVELGVQAALL*LQPGTP
Trigger: TGGGGTTCCGGGCTGCAGCCAGAGGAGGGCAGCCTG...CACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCACTGTGTGAGCTCCGCTaGGATGCGCCTCTAGACTCA +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEALCELR*DAPLDS
Trigger: TGAGTCTAGAGGCGCATCTCAGCGGAGCTCACACAG...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGAGTCCTTGCCCGGGCTaGCTGTTCACTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVSPCPG*LFTAAA
Trigger: GGCTGCAGCAGTGAACAGTCAGCCCGGGCAAGGACT...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGGCGGCAGTCGAAGCTTaGGCTCTCGAAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CPCPQARPEVAYLETAPLAAVEA*ALEVLS
Trigger: TGACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGC...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp ACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTGGCCTGCACCTGCTTaGCACAGGCCAGTGCGTACT +
Preference number: 4 (lower is better)
Translates to: TQFPPLVLRKPRLLLLHGWPAPA*HRPVRT
Trigger: AGTACGCACTGGCCTGTGTCAAGCAGGTGCAGGCCA...GCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCGTGTGTACTCAGACGTaGTGTGCTCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLVCTQT*CAPAPP
Trigger: TGGAGGAGCTGGAGCACATCACGTCTGAGTACACAC...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGAAGCGGCTGGTGTGTACTCAGACGTaGTGTGCTCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AVEELSSPRSLPRSRKRLVCTQT*CAPAPP
Trigger: TGGAGGAGCTGGAGCACATCACGTCTGAGTACACAC...CAGCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGCTGGTGTCCATGGTaGCATACTCCCCGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQSWCPW*HTPRCG
Trigger: CCCGCAACGGGGAGTATGTCACCATGGACACCAGCT...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAAGGCGGGGCCGGGACTaGGGCCGGGCCCGAGACTCA +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSRRGRD*GRARDS
Trigger: TGAGTCTCGGGCCCGGCCTCAGTCCCGGCCCCGCCT...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGGTCTCGGAAGCGGCTaGGGAAGGCTTGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLGLGSG*GRLALP
Trigger: AGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACC...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGTTCTGGTGGTGGCGTaGGCGCTTGGCTTTGGATCG +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLVLVVA*ALGFGS
Trigger: CGATCCAAAGCCAAGCGCTCACGCCACCACCAGAAC...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGAGTGGGTCATCAGGGTaGCCAGGATCTTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQSGSSG*PGSWVL
Trigger: CAGCACCCAAGATCCTGGTCACCCTGATGACCCACT...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCAAGTCCTGAGAGCTTaGAGCCTTGGCCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRQVLRA*SLGPAL
Trigger: CAAGGCGGGGCCAAGGCTTCAAGCTCTCAGGACTTG...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCAAGTCCTGAGAGCTTaGAGCCTTGGCCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSAQVLRA*SLGPAL
Trigger: CAAGGCGGGGCCAAGGCTTCAAGCTCTCAGGACTTG...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGCATGGAGGAAGCAGGGTaGGTCCATGGACACATGGAC +
Preference number: 4 (lower is better)
Translates to: APAPRLGLKSLTWRQHLCMEEAG*VHGHMD
Trigger: GTCCATGTGTCCATGGACTCACCCTGCTTCCTCCAT...GCAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCGTGGCAGCCAAGGGCTaGGGGAGCTGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFVAAKG*GSCGRA
Trigger: AGCTCTTCCACAGCTCCCTCAGCCCTTGGCTGCCAC...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581082.5
CDS-3UTR GCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCCTGGGCAAGGCCGGTaGTGTGGGGGCCCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLPGQGR*CGGPGD
Trigger: ATCCCCTGGGCCCCCACAGCACCGGCCTTGCCCAGG...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAACCTGGGCAAGGCCGGTaGTGTGGGGGCCCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: GIPPAHRGRILPSLQWSEPGQGR*CGGPGD
Trigger: ATCCCCTGGGCCCCCACAGCACCGGCCTTGCCCAGG...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGCCCGTTGGACTCATTaGCACTTGAACCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWARWTH*HLNHCC
Trigger: ACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGC...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCGCGCCTCTAGACTCATaGCCGTTGGACTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLAPLDS*PLDSLP
Trigger: TGGCAATGAGTCCAACGGGCATGAGTCTAGAGGCGC...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGCTGTAGGCAATGGAACTaGTGGGTGGGGATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: APAPRLGLKSLTWRQHLCCRQWN*WVGMGS
Trigger: AGAGCCCATCCCCACCCAGCAGTTCCATTGCCTACA...GCAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CGAGGCTGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGTGTAGGCAATGGAACTaGTGGGTGGGGATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RGCGACAGARVLLQQKFECRQWN*WVGMGS
Trigger: AGAGCCCATCCCCACCCAGCAGTTCCATTGCCTACA...CTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGGGGCTGACTGTTCACTaGTGCAGCCACTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQGLTVH*CSHWWT
Trigger: CGTCCACCAGTGGCTGCAGCAGTGAACAGTCAGCCC...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGTGGTTGGCCTGCACCTaGTTGACACAGGCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQWLACT*LTQASA
Trigger: CGCACTGGCCTGTGTCAAGCAGGTGCAGGCCAACCA...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGATATTCCTGGTTGGCCTaGACCTGCTTGACACAGGCC +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGYSWLA*TCLTQA
Trigger: GGCCTGTGTCAAGCAGGTGCAGGCCAACCAGGAATA...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CTGAGGGAGCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGACTGCATCACCCCCGTTaGTATCACTGGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: LRELWKSCRVHAACPGLGLHHPR*YHWRTQ
Trigger: CTGGGTCCTCCAGTGATAGCAACGGGGGTGATGCAG...TCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCCGAGCGGGCTCAGGGTaGCTCCCACCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVRAGSG*LPPLAP
Trigger: AGGAGCCAGTGGTGGGAGGCACCCTGAGCCCGCTCG...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR GCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTCGAGTCCACGCAGCCTaGCCAGGTCTCGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSRVHAA*PGLGSG
Trigger: GCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCG...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGAAGCAGGGGTCTGGAGTaGCCCATAAGGATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGSRGLE*PIRIAG
Trigger: TCCAGCTATCCTTATGGGGCACTCCAGACCCCTGCT...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGAAAACCGAGGCTGCTaGTTCTGCATGGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEAENRGC*FCMARS
Trigger: GCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTC...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTTTCCGGACCCAGGAGTaGACAGCACCCAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWAFRTQE*TAPSSR
Trigger: GCGGGAACTGGGTGCTGTGCACTCCTGGGTCCGGAA...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCACGGAGTTCTGCTCTCTaGTCCCTAAGAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEARSSAL*SLRGQR
Trigger: CCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCG...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGCCCGCAATAAATAAGTaGAGCCCCAACCCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWPAINK*SPNPQE
Trigger: CTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGG...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTGGAACCCCCGGGTCCTaGTTGGGCCTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSGTPGS*LGLRLS
Trigger: GGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGTTCC...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGCCCTCCTCTGGCTaGAGCCCGGAACCCCATCCT +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCLPSSG*SPEPHP
Trigger: AGGATGGGGTTCCGGGCTGCAGCCAGAGGAGGGCAG...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGGACAGCACCTCTGCCTaGCCATCCCAGTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVDSTSA*PSQCHP
Trigger: GGGATGGCACTGGGATGGGCAGGCAGAGGTGCTGTC...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGATCTTGCTGCTCTCAGTaGTCTCCAGCAGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERSCCSQ*SPAGLS
Trigger: ACTCAGCCCTGCTGGAGACCACTGAGAGCAGCAAGA...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TGGGGAGAAGCTAGCGAGGGGCCTGTCCCTAGGCAGGGCCTAGTGGTGGAAGCAAGGCAATGGAACTGCTaGGTGGGGATGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: WGEASEGPVPRQGLVVEARQWNC*VGMGSE
Trigger: CTCAGAGCCCATCCCCACCCAGCAGTTCCATTGCCT...TGCTTCCACCACTAGGCCCTGCCTAGGGACAGGCCCCTCGCTAGCTTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCCCCCTGTGCCCCAGGTaGGCAGGCGAGATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVPLCPR*AGEMEQ
Trigger: CTGCTCCATCTCGCCTGCCCACCTGGGGCACAGGGG...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp AGGTCTCGGAAGCGGCTGAGGAAGGCTTGCTCTTCCTTCTGTGTGTGCAGGGACCTGGTACCGAGGCCCTaGATCCCGGTCAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: RSRKRLRKACSSFCVCRDLVPRP*IPVRTS
Trigger: GGAGGTCCTGACCGGGATCCAGGGCCTCGGTACCAG...GTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGGTTAGGCGGAATGGCTaGTACCGAGGCCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQVRRNG*YRGPGS
Trigger: GGATCCAGGGCCTCGGTACCAGCCATTCCGCCTAAC...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGAGTGGTCAAAGGGCTaGCCCGCCAACTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEAEWSKG*PANCRI
Trigger: GATTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTC...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGGCCGTGCGTACTTTGTaGCGGCCCAACACGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRAVRTL*RPNTKA
Trigger: AGCCTTCGTGTTGGGCCGCCACAAAGTACGCACGGC...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTACCCCGTTGCTATCACTaGAGGACCCAGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLPRCYH*RTQGCG
Trigger: TCCACAGCCCTGGGTCCTCCAGTGATAGCAACGGGG...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp ACAGGCCATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTGCCCCGTTGCTATCACTaGAGGACCCAGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: TGHHIKSPRQLALPDPGVPRCYH*RTQGCG
Trigger: TCCACAGCCCTGGGTCCTCCAGTGATAGCAACGGGG...CACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGTCTGGGTCTGGGGATTaGCAGGGAAGGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVSGSGD*QGRALA
Trigger: GGCCAAGGCCCTTCCCTGCCAATCCCCAGACCCAGA...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTGCGTCAAGGCTAGTGGGGCCTaGACGGGAGCAGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: RVLLQQKFEQVTGAGKCVKASGA*TGAEPA
Trigger: GGCGGGTTCTGCTCCCGTCCAGGCCCCACTAGCCTT...GACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCCACTCTCCGCCTTATTaGCCAGGGCGAGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFHSPPY*PGRAGS
Trigger: TGAGCCCGCTCGCCCTGGCCAATAAGGCGGAGAGTG...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GCTGGGCCTGGGGCTAGGCCAGGCAGGTCCTCCATCATGATGATGTCTTTCTTGGTAGGCGTCTGGGGCTaGGTCAGGGGCTACTGTGGG +
Preference number: 4 (lower is better)
Translates to: AGPGARPGRSSIMMMSFLVGVWG*VRGYCG
Trigger: CCCACAGTAGCCCCTGACCCAGCCCCAGACGCCTAC...CAAGAAAGACATCATCATGATGGAGGACCTGCCTGGCCTAGCCCCAGGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAAGGGCTGAGGGAGCTGTaGAAGAGCTGTCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: RNKARERLHEGSSWGCAEGLREL*KSCRVH
Trigger: GTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCC...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGGGGCTGAGGGAGCTGTaGAAGAGCTGTCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRGLREL*KSCRVH
Trigger: GTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCC...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGGGTGGCGTGAGCGCTTaGCTTTGGATCGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRGGVSA*LWIGSG
Trigger: ACCACTGCCGATCCAAAGCCAAGCGCTCACGCCACC...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGCGAGGGTTCTGGTGGTaGCGTGAGCGCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQRGFWW*RERLAL
Trigger: CAAAGCCAAGCGCTCACGCCACCACCAGAACCCTCG...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTCACCAAGGCCACCATTaGGGTCACCAAAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWAHQGHH*GHQRGG
Trigger: CCCGCCCCTTTGGTGACCCCAATGGTGGCCTTGGTG...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGAGTGCACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGGTTCGAGCAGGTCACTaGAGCCGGAAAGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: GVHSTQFPPLVLRKPRLLVRAGH*SRKVRP
Trigger: AGGACGCACTTTCCGGCTCCAGTGACCTGCTCGAAC...CAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp ACAGGCCATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTGGTGCTGCCCCCTTCATaGGAGCCTGAACCAGACCCA +
Preference number: 4 (lower is better)
Translates to: TGHHIKSPRQLALPDPGVVLPPS*EPEPDP
Trigger: TGGGTCTGGTTCAGGCTCCCATGAAGGGGGCAGCAC...CACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGCTTGTGTGGCTGCTCTaGCTGCTGCGAGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQLVWLL*LLRVML
Trigger: CAGCATCACTCGCAGCAGCCAGAGCAGCCACACAAG...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGAGTCATCATGACGCGCTaGTCAGCATTGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERVIMTR*SALAMS
Trigger: GCTCATGGCCAATGCTGACCAGCGCGTCATGATGAC...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGCAGAGGTCATGTCCCTaGAGGGCACCTGGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQQRSCP*RAPGRS
Trigger: TGACCTACCAGGTGCCCTCCAGGGACATGACCTCTG...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGCTGCTGCTTCTGCATaGCTCGGAGCCGCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWAAAASA*LGAAPD
Trigger: ATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGC...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCCCCAGTTCCCGCCGCTaGTCCTCAGAAAACCGAGGC +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFPSSRR*SSENRG
Trigger: GCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGG...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGAGCCCGAGGCGAGAGCTTGAAGCCTTaGCCCCGCCTTGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SWVLLPQSTQAITSRARGESLKP*PRLGPP
Trigger: AGGAGGCCCAAGGCGGGGCCAAGGCTTCAAGCTCTC...GCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCGACACTCCTCTGGGCTaGGCTGCGGAGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCDTPLG*AAEFCS
Trigger: AGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTC...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TGGGGAGAAGCTAGCGAGGGGCCTGTCCCTAGGCAGGGCCTAGTGGTGGAAGCAACCAGCCTGGGTCCCTaGAGCAGAAACACCTCCCTT +
Preference number: 4 (lower is better)
Translates to: WGEASEGPVPRQGLVVEATSLGP*SRNTSL
Trigger: AAGGGAGGTGTTTCTGCTCCAGGGACCCAGGCTGGT...TGCTTCCACCACTAGGCCCTGCCTAGGGACAGGCCCCTCGCTAGCTTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCCAGGCTGCCCTCCTCTaGCTGCAGCCCGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVQAALL*LQPGTP
Trigger: TGGGGTTCCGGGCTGCAGCCAGAGGAGGGCAGCCTG...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCCCGCACAGCCTCCATTaGCACCTCCGGCCGCCATCG +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVPHSLH*HLRPPS
Trigger: CGATGGCGGCCGGAGGTGCCAATGGAGGCTGTGCGG...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCGTCATGAGTTCCTTCTaGGTCCTTGCCCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCVMSSF*VLARAD
Trigger: GTCAGCCCGGGCAAGGACTCAGAAGGAACTCATGAC...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGAGAAGGAGACAGCCACTaGGAAGGTATCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGEGDSH*EGILVL
Trigger: CAGAACCAGGATACCTTCTCAGTGGCTGTCTCCTTC...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317276.9
CDS-3UTR TCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCTGGGGGCCGGGGGAGTaGACACGTCCTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVWGPGE*TRPHSG
Trigger: CCCTGAATGAGGACGTGTTCACTCCCCCGGCCCCCA...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCAGCTCTCCAGGTACCTaGGGATGCTGTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCSSPGT*GCCPGS
Trigger: ACTGCCTGGACAGCATCCTCAGGTACCTGGAGAGCT...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp AAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGAGCTCTCCAGGTACCTaGGGATGCTGTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KPRLLLLHGSEPLPILLQSSPGT*GCCPGS
Trigger: ACTGCCTGGACAGCATCCTCAGGTACCTGGAGAGCT...CTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTCCCAGACAGCGCTGCTaGCGGCGGATCTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWAPRQRC*RRIFLG
Trigger: ACCAAGAAAGATCCGCCGTCAGCAGCGCTGTCTGGG...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp ATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTGCACAGCACCCAGACAGCGCTGCTaGCGGCGGATCTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ITSRARGSWPFRTQECTAPRQRC*RRIFLG
Trigger: ACCAAGAAAGATCCGCCGTCAGCAGCGCTGTCTGGG...TGCTGTGCACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGTCGCTCGCCAAGGGCTaGGGGAGCTGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLSLAKG*GSCGRA
Trigger: AGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGA...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp CTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGGGTCAGCATTGGCCATaGGCAGCCAAATGGGATCCT +
Preference number: 4 (lower is better)
Translates to: LVLRKPRLLLLHGSEPLPGQHWP*AAKWDP
Trigger: AGGATCCCATTTGGCTGCTCATGGCCAATGCTGACC...CGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCACAGTCCATCCAGCTCTaGGAAGAGTGGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEAQSIQL*EEWVIR
Trigger: CCTGATGACCCACTCTTCTCAGAGCTGGATGGACTG...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTTGGATCCTAGGCTGGTaGTGGGGGTCCGGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSWILGW*WGSGPL
Trigger: TAGGGGGCCGGACCCCCATCACCAGCCTAGGATCCA...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGGCGCCTCTAGACTCATaGCCGTTGGACTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: CPCPQARPEVAYLETAPLAPLDS*PLDSLP
Trigger: TGGCAATGAGTCCAACGGGCATGAGTCTAGAGGCGC...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp TGGGGAGAAGCTAGCGAGGGGCCTGTCCCTAGGCAGGGCCTAGTGGTGGAAGCAGCGCCTCTAGACTCATaGCCGTTGGACTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: WGEASEGPVPRQGLVVEAAPLDS*PLDSLP
Trigger: TGGCAATGAGTCCAACGGGCATGAGTCTAGAGGCGC...TGCTTCCACCACTAGGCCCTGCCTAGGGACAGGCCCCTCGCTAGCTTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCGCAGGGCTGAGTCCTTaGCGTTGCCTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCAGLSP*RCLRRS
Trigger: GCTCCTCCTCAGGCAACGGCAAGGACTCAGCCCTGC...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGTCCCAGAGCGGCCCTTaGCCCGGCGCTCTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELSQSGP*PGALAA
Trigger: TGCCGCCAGAGCGCCGGGGCAAGGGCCGCTCTGGGA...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp AGGGCTGAGGGAGCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTTATTCCTGGTTGGCCTaGACCTGCTTGACACAGGCC +
Preference number: 4 (lower is better)
Translates to: RAEGAVEELSSPRSLPRSYSWLA*TCLTQA
Trigger: GGCCTGTGTCAAGCAGGTGCAGGCCAACCAGGAATA...AGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCGAATGGATGCGCTCTaGAATCAGCAGGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRRMDAL*NQQAAR
Trigger: CCGTGCTGCCTGCTGATTGCAGAGCGCATCCATTCG...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAACGAATGGATGCGCTCTaGAATCAGCAGGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: RNKARERLHEGSSWGCAERMDAL*NQQAAR
Trigger: CCGTGCTGCCTGCTGATTGCAGAGCGCATCCATTCG...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAAACACGAAGGCTACCTTaGGGCTCCAGGGGTGCACAA +
Preference number: 4 (lower is better)
Translates to: RNKARERLHEGSSWGCAETRRLP*GSRGAQ
Trigger: TTGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGT...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTGCATCACCCCCGTTaGTATCACTGGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSALHHPR*YHWRTQ
Trigger: CTGGGTCCTCCAGTGATAGCAACGGGGGTGATGCAG...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAAACTGGACCTGTCCTCTaGCTGTCGTCGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RNKARERLHEGSSWGCAETGPVL*LSSSEA
Trigger: AGCCTCTGACGACGACAGGCAGAGGACAGGTCCAGT...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGTCTTCCTTCTGTGTGTaGAGGGACAGCACGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CPCPQARPEVAYLETAPLSSFCV*RDSTAL
Trigger: CAAGGCCGTGCTGTCCCTGCACACACAGAAGGAAGA...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGGTGGGGGCCCGGCACTaGTCCCAGGGCCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGVGARH*SQGLLQ
Trigger: TTGCAGGAGGCCCTGGGAGCAGTGCCGGGCCCCCAC...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTCGAGGCTGCTGCTTCTaGATGGCTCGGAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSRGCCF*MARSRS
Trigger: GGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCG...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GTGACCAGGATCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGCGAGGCTGCTGCTTCTaGATGGCTCGGAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: VTRILGAAPTVHTGHHIKRGCCF*MARSRS
Trigger: GGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCG...CTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCAGGATCTTGGGTGCTaGTCCCACAGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSAQDLGC*SHSPHR
Trigger: CCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTG...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGACCAGGATCTTGGGTaGTGCTCCCACAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLDQDLG*CSHSPH
Trigger: GTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTC...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTGGGCTGCGGAGTTCTaGTCTCTGCTCCCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCWAAEF*SLLPKR
Trigger: CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCA...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCTGTCATCGGCCAGGCTaGGGCCTGGGCAAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLCHRPG*GLGKAG
Trigger: ACCGGCCTTGCCCAGGCCCCAGCCTGGCCGATGACA...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGTCTTGCTGCTCTCAGTaGTCTCCAGCAGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: CPCPQARPEVAYLETAPLSCCSQ*SPAGLS
Trigger: ACTCAGCCCTGCTGGAGACCACTGAGAGCAGCAAGA...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAACTGCTGGGTGGGGATaGGCTCTGAGAGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEATAGWG*ALRVCA
Trigger: AGCACAAACTCTCAGAGCCCATCCCCACCCAGCAGT...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCAGGCAATGGAACTGCTaGGTGGGGATGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCRQWNC*VGMGSE
Trigger: CTCAGAGCCCATCCCCACCCAGCAGTTCCATTGCCT...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCGGAGGCTGTAGGCAATaGAACTGCTGGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCGGCRQ*NCWVGM
Trigger: CATCCCCACCCAGCAGTTCCATTGCCTACAGCCTCC...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGGAGGCTGTAGGCAATaGAACTGCTGGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: VPAAGPQKTEAAASAWLGGGCRQ*NCWVGM
Trigger: CATCCCCACCCAGCAGTTCCATTGCCTACAGCCTCC...TCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTGCAGCCACTGGTaGACGGGTTGTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFCCSHW*TGCPAL
Trigger: CAGAGCAGGACAACCCGTCCACCAGTGGCTGCAGCA...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CGGAAGCGGCTGAGGAAGGCTTGCTCTTCCTTCTGTGTGTGCAGGGACAGCACGTGCTGCAGCCACTGGTaGACGGGTTGTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RKRLRKACSSFCVCRDSTCCSHW*TGCPAL
Trigger: CAGAGCAGGACAACCCGTCCACCAGTGGCTGCAGCA...CGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGACCTCCAGGGTATAGGTaGACATGTCCATGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERPPGYR*TCPWSK
Trigger: CTTGCTCCATGGACATGTCCACCTATACCCTGGAGG...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGGTTAGGCGGAATGGCTaGTACCGAGGCCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVVRRNG*YRGPGS
Trigger: GGATCCAGGGCCTCGGTACCAGCCATTCCGCCTAAC...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGCTGAGACCCGGATCTTaGTCACATACGGGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQLRPGS*SHTGLG
Trigger: GCCTAACCCCGTATGTGACCAAGATCCGGGTCTCAG...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGGAGTGGTCAAAGGGCTaGCCCGCCAACTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQEWSKG*PANCRI
Trigger: GATTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTC...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGAAGCGGATAGGGGAGTaGTCAAAGGGCTGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLKRIGE*SKGWPA
Trigger: GGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTT...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGATGCTCTGACAGCTCCTaGATATCAGTGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERCSDSS*ISVSRE
Trigger: CTCCCTGGACACTGATATCCAGGAGCTGTCAGAGCA...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCCCCGTTGCTATCACTaGAGGACCCAGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVPRCYH*RTQGCG
Trigger: TCCACAGCCCTGGGTCCTCCAGTGATAGCAACGGGG...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCAAGGCTAGTGGGGCCTaGACGGGAGCAGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVKASGA*TGAEPA
Trigger: GGCGGGTTCTGCTCCCGTCCAGGCCCCACTAGCCTT...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGTCCCCACAGAGACTaGACCTGTCCTCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWAGPHRD*TCPLPV
Trigger: GACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACC...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGACGGCGGATCTTTCTTaGTCCCCACAGAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQTADLS*SPQRLD
Trigger: GTCCAGTCTCTGTGGGGACCAAGAAAGATCCGCCGT...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGCACTGGCTCCTTCCGTaGGGTGGCCCCCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLRKEQGQGEVTRGVELGHWLLP*GGPLPR
Trigger: TCTGGGGAGGGGGCCACCCCACGGAAGGAGCCAGTG...CCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR CCA 90 bp CTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGTAGGCGTCTGGGGCTaGGTCAGGGGCTACTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLPIEAVFCLACNGVKSGVGVWG*VRGYCG
Trigger: CCCACAGTAGCCCCTGACCCAGCCCCAGACGCCTAC...CCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTGTAGGCGTCTGGGGCTaGGTCAGGGGCTACTGTGGG +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSVGVWG*VRGYCG
Trigger: CCCACAGTAGCCCCTGACCCAGCCCCAGACGCCTAC...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTCTTGGTCAGCCCCACTaGACGGTAGGCGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSLGQPH*TVGVWG
Trigger: GCCCCAGACGCCTACCGTCCAGTGGGGCTGACCAAG...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCGTTCGAGCAGGTCACTaGAGCCGGAAAGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCVRAGH*SRKVRP
Trigger: AGGACGCACTTTCCGGCTCCAGTGACCTGCTCGAAC...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAACTTGTGTGGCTGCTCTaGCTGCTGCGAGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: PERESSCSRSSSRSLEPELVWLL*LLRVML
Trigger: CAGCATCACTCGCAGCAGCCAGAGCAGCCACACAAG...TTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTGGGTCCGGCCCCCTATaGTGGGAGAAGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRIGSGPL*WEKLGQ
Trigger: CTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACCC...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGACACTCCTCTGGGCTaGGCTGCGGAGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWADTPLG*AAEFCS
Trigger: AGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTC...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGAGCCCGAGGCGAGGTGACACTCCTCTaGGCTGGGCTGCGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SWVLLPQSTQAITSRARGEVTLL*AGLRSS
Trigger: AGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTC...GCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCAGGAGGCCCCAGGTaGCTACCTCGCTCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: AVFCLACNGVKSGAGKPSPGGPR*LPRSPR
Trigger: CCTTGGCGAGCGAGGTAGCCACCTGGGGCCTCCTGG...ACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCGGACTCATTGCCACTTaGACCATTGCTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLGLIAT*TIAVGI
Trigger: GATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCC...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGCGGACTCATTGCCACTTaGACCATTGCTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: APAPRLGLKSLTWRQHLCGLIAT*TIAVGI
Trigger: GATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCC...GCAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCTGTGTGAGCTCCGCTaGGATGCGCCTCTAGACTCA +
Preference number: 4 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVLCELR*DAPLDS
Trigger: TGAGTCTAGAGGCGCATCTCAGCGGAGCTCACACAG...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp CGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGCGGCAGTCGAAGCTTaGGCTCTCGAAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RSASPLAAEVRAGHWSRKAAVEA*ALEVLS
Trigger: TGACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGC...TTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGTGGCCTGCACCTGCTTaGCACAGGCCAGTGCGTACT +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLWPAPA*HRPVRT
Trigger: AGTACGCACTGGCCTGTGTCAAGCAGGTGCAGGCCA...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGGAGCTGAAGCTACACTaGCTGGTGACGGACACCACA +
Preference number: 4 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKELKLH*LVTDTT
Trigger: TGTGGTGTCCGTCACCAGTCAGTGTAGCTTCAGCTC...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp AGGTCTCGGAAGCGGCTGAGGAAGGCTTGCTCTTCCTTCTGTGTGTGCAGGGACGGTCTCGGAAGCGGCTaGGGAAGGCTTGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RSRKRLRKACSSFCVCRDGLGSG*GRLALP
Trigger: AGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACC...GTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTTCGCTCGCCAAGGGCTaGGGGAGCTGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSSLAKG*GSCGRA
Trigger: AGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGA...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000582719.5
CDS-3UTR TCA 90 bp GAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCTCGCTCGCCAAGGGCTaGGGGAGCTGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: EAVFCLACNGVKSGAGKPSLAKG*GSCGRA
Trigger: AGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGA...GGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGGGTCAGCATTGGCCATaGGCAGCCAAATGGGATCCT +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQGQHWP*AAKWDP
Trigger: AGGATCCCATTTGGCTGCTCATGGCCAATGCTGACC...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGCAGTCCATCCAGCTCTaGGAAGAGTGGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKQSIQL*EEWVIR
Trigger: CCTGATGACCCACTCTTCTCAGAGCTGGATGGACTG...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGTCCATAGCCAAGTCCTaGGAGCTTGAAGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKSIAKS*ELEALA
Trigger: GGCCAAGGCTTCAAGCTCTCAGGACTTGGCTATGGA...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCTGGAAAGCCCAGTCCTaGGTCCTGCGTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCWKAQS*VLRLPA
Trigger: TGCAGGCAGACGCAGGACTCAGGACTGGGCTTTCCA...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTGCGCCTCTAGACTCATaGCCGTTGGACTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSAAPLDS*PLDSLP
Trigger: TGGCAATGAGTCCAACGGGCATGAGTCTAGAGGCGC...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp TTAGTGGTGCTGGGGAGGTTGCAGCTCTCCAGGTACCTGAGGATGCTGTCCAGGGTGGACGGGTTGTCCTaGTCTGAGCTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: LVVLGRLQLSRYLRMLSRVDGLS*SELALR
Trigger: CCTGAGTGCCAGCTCAGAGCAGGACAACCCGTCCAC...CCTGGACAGCATCCTCAGGTACCTGGAGAGCTGCAACCTCCCCAGCACCACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGCTTGAGCTCTCGAAGTaGTGTCATGAGTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRLELSK*CHEFLL
Trigger: CAGAAGGAACTCATGACAGCACTTCGAGAGCTCAAG...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGCAGGCCAGTGCGTACTaGAGCGTGGCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LLRKEQGQGEVTRGVELGQASAY*SVARVP
Trigger: TGGGACCCTGGCCACGCTGCAGTACGCACTGGCCTG...CCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTGCTGTCAGGCCAGTGCGTACTaGAGCGTGGCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GLLEMVPEWSLAGAVSCCQASAY*SVARVP
Trigger: TGGGACCCTGGCCACGCTGCAGTACGCACTGGCCTG...ACAGCAGGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGTATTCCTGGTTGGCCTaGACCTGCTTGACACAGGCC +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQYSWLA*TCLTQA
Trigger: GGCCTGTGTCAAGCAGGTGCAGGCCAACCAGGAATA...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp AAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGTATTCCTGGTTGGCCTaGACCTGCTTGACACAGGCC +
Preference number: 4 (lower is better)
Translates to: KPRLLLLHGSEPLPILLQYSWLA*TCLTQA
Trigger: GGCCTGTGTCAAGCAGGTGCAGGCCAACCAGGAATA...CTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCATACTCAGACGTGATGTaGTCCAGCTCCTCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEAYSDVM*SSSSRV
Trigger: TACCCTGGAGGAGCTGGAGCACATCACGTCTGAGTA...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCGGAACACGTCCCGCTTaGAACGCAGCAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVGTRPA*NAAGRL
Trigger: CAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCC...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCCGAATGGATGCGCTCTaGAATCAGCAGGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFRMDAL*NQQAAR
Trigger: CCGTGCTGCCTGCTGATTGCAGAGCGCATCCATTCG...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTAGGCAGCTGGGTGTGTaGCGCGTAGTGAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSARQLGV*RVVKIL
Trigger: GAGGATTTTCACTACGCGGCACACACCCAGCTGCCT...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGGGTCGGTCCTCAGGATaGAGGAACAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLGRSSG*RNRSTG
Trigger: CCCAGTGCTCCTGTTCCTGCATCCTGAGGACCGACC...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGGGCTGGCCCGCCAACTaGAGAATCTTCTTGTGGATA +
Preference number: 4 (lower is better)
Translates to: CPCPQARPEVAYLETAPLGWPAN*RIFLWI
Trigger: TATCCACAAGAAGATTCTGCAGTTGGCGGGCCAGCC...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp ATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTGCACAGCAACACGAAGGCTACCTTaGGGCTCCAGGGGTGCACAA +
Preference number: 4 (lower is better)
Translates to: ITSRARGSWPFRTQECTATRRLP*GSRGAQ
Trigger: TTGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGT...TGCTGTGCACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCACTGGACCTGTCCTCTaGCTGTCGTCGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFTGPVL*LSSSEA
Trigger: AGCCTCTGACGACGACAGGCAGAGGACAGGTCCAGT...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGCGAGCGGGCTCAGGGTaGCTCCCACCACTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGRAGSG*LPPLAP
Trigger: AGGAGCCAGTGGTGGGAGGCACCCTGAGCCCGCTCG...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTTCCTTCTGTGTGTaGAGGGACAGCACGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCSSFCV*RDSTAL
Trigger: CAAGGCCGTGCTGTCCCTGCACACACAGAAGGAAGA...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGCGGCTGAGGAAGGCTTaGTCTTCCTTCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQRLRKA*SSFCVC
Trigger: GCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCG...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCACTGGAGCCGGAAAGTaGGTCCTGATTGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCTGAGK*VLIGGL
Trigger: GAGTCCTCCAATCAGGACGCACTTTCCGGCTCCAGT...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCGAGCGCGAGTCCTCTTaGAGCAGAAGTTCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFERESS*SRSSSR
Trigger: CCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTC...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp ACCCCCGGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGCGGAAGAGTCGATGCTaGCAAAGTATTTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: TPGSCLGLRLSSHLGRRWRKSRC*QSICLC
Trigger: ACACAAGCAAATACTTTGGCAGCATCGACTCTTCCG...CCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGTCAGAAAACCGAGGCTaGTGCTTCTGCATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQSENRG*CFCMAR
Trigger: CCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGA...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp AAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGTCAGAAAACCGAGGCTaGTGCTTCTGCATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: KPRLLLLHGSEPLPILLQSENRG*CFCMAR
Trigger: CCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGA...CTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCCACTGCCGCCACCGCTaGTGCCCTGCTCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVHCRHR*CPARLH
Trigger: GTGGAGGCGAGCAGGGCAGCAGCGGTGGCGGCAGTG...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTTGGGCTGCGGAGTTCTaGTCTCTGCTCCCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWAWAAEF*SLLPKR
Trigger: CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCA...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCAGTGGGCATACTTCCTaGCCCTGCCCCCAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVSGHTS*PCPQAR
Trigger: CCTAGCCTGGGGGCAGGGGCAGGAAGTATGCCCACT...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCTTGAACCATTGCTGTTaGCATCGGTGTCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLLNHCC*HRCHRP
Trigger: TGGCCGATGACACCGATGCCAACAGCAATGGTTCAA...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCACTGCTGGGTGGGGATaGGCTCTGAGAGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCTAGWG*ALRVCA
Trigger: AGCACAAACTCTCAGAGCCCATCCCCACCCAGCAGT...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGAATGGAACTGCTGGGTaGGGATGGGCTCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQNGTAG*GWALRV
Trigger: AACTCTCAGAGCCCATCCCCACCCAGCAGTTCCATT...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGAGTGCACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGAATGGAACTGCTGGGTaGGGATGGGCTCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: GVHSTQFPPLVLRKPRLLNGTAG*GWALRV
Trigger: AACTCTCAGAGCCCATCCCCACCCAGCAGTTCCATT...CAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCTGCTGCAGCCACTGGTaGACGGGTTGTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCCCSHW*TGCPAL
Trigger: CAGAGCAGGACAACCCGTCCACCAGTGGCTGCAGCA...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCACTGCTGCAGCCACTaGTGGACGGGTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCHCCSH*WTGCPA
Trigger: AGCAGGACAACCCGTCCACCAGTGGCTGCAGCAGTG...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGCTTGCCCCGGCGCTCTaGCGGCAGTCGAAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVLAPAL*RQSKLE
Trigger: CTCAAGCTTCGACTGCCGCCAGAGCGCCGGGGCAAG...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TGGGGAGAAGCTAGCGAGGGGCCTGTCCCTAGGCAGGGCCTAGTGGTGGAAGCACCTCCAGGGTATAGGTaGACATGTCCATGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: WGEASEGPVPRQGLVVEAPPGYR*TCPWSK
Trigger: CTTGCTCCATGGACATGTCCACCTATACCCTGGAGG...TGCTTCCACCACTAGGCCCTGCCTAGGGACAGGCCCCTCGCTAGCTTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGGCGAGATGGAGCAGTaGAACCATAGAAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEAGEMEQ*NHRRLP
Trigger: TGGGAGTCTTCTATGGTTCCACTGCTCCATCTCGCC...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGGGCGAGATGGAGCAGTaGAACCATAGAAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQGEMEQ*NHRRLP
Trigger: TGGGAGTCTTCTATGGTTCCACTGCTCCATCTCGCC...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGCTGGTACCGAGGCCCTaGATCCCGGTCAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVLVPRP*IPVRTS
Trigger: GGAGGTCCTGACCGGGATCCAGGGCCTCGGTACCAG...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGTGGGGCTGGGGCTGTaGACGGGCTGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRVGLGL*TGCSSS
Trigger: GCTGCTGCTGCAGCCCGTCCACAGCCCCAGCCCCAC...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCCCCGTTGCTATCACTaGAGGACCCAGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCPRCYH*RTQGCG
Trigger: TCCACAGCCCTGGGTCCTCCAGTGATAGCAACGGGG...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGCTCCAGCTCTGGGTCTaGGGATTGGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQLQLWV*GLAGKG
Trigger: GCCCTTCCCTGCCAATCCCCAGACCCAGAGCTGGAG...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGGGTCCCCACAGAGACTaGACCTGTCCTCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LRKEQGQGEVTRGVELGVGPHRD*TCPLPV
Trigger: GACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACC...CACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGCACTGGCTCCTTCCGTaGGGTGGCCCCCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGHWLLP*GGPLPR
Trigger: TCTGGGGAGGGGGCCACCCCACGGAAGGAGCCAGTG...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCGTAGGCGTCTGGGGCTaGGTCAGGGGCTACTGTGGG +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLVGVWG*VRGYCG
Trigger: CCCACAGTAGCCCCTGACCCAGCCCCAGACGCCTAC...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGCTTGGTCAGCCCCACTaGACGGTAGGCGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVLGQPH*TVGVWG
Trigger: GCCCCAGACGCCTACCGTCCAGTGGGGCTGACCAAG...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGGGACAGCACGGCCTTaGTCAGCCCCACTGGACGGT +
Preference number: 4 (lower is better)
Translates to: LLRKEQGQGEVTRGVELGGTARP*SAPLDG
Trigger: ACCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCC...CCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCGGGACAGCACGGCCTTaGTCAGCCCCACTGGACGGT +
Preference number: 4 (lower is better)
Translates to: ESLSWTPGDGPRMESSWCGTARP*SAPLDG
Trigger: ACCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCC...GCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTGCTTTGGATCGGCAGTaGTGTCGGCGGCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSALDRQ*CRRLGG
Trigger: ACCCCCAAGCCGCCGACACCACTGCCGATCCAAAGC...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TGTCTCCCCGCAATAAATAAGTGCAGCCCCAACCCTCAAGAGTCAGATTCAGGCGGGGGTAGTGGCTGGTaGGGTGGGCCAGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CLPAINKCSPNPQESDSGGGSGW*GGPGGG
Trigger: TCCACCCCCTGGCCCACCCCACCAGCCACTACCCCC...GCCTGAATCTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCCCCCATAAGGATAGCTaGATGGGGTTGGGAACAGAT +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLPHKDS*MGLGTD
Trigger: ATCTGTTCCCAACCCCATCCAGCTATCCTTATGGGG...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTCTCGAGTTGAACAGTaGAGAGTCCGGGCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFSRVEQ*RVRAVR
Trigger: CCTCACCGCCCGGACTCTCCACTGTTCAACTCGAGA...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCCAGATTGAGCTGGAGTaGAGAGCTGCATCTCGAGTT +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLQIELE*RAASRV
Trigger: AACTCGAGATGCAGCTCTCCACTCCAGCTCAATCTG...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGTCATCATGACGCGCTaGTCAGCATTGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLVIMTR*SALAMS
Trigger: GCTCATGGCCAATGCTGACCAGCGCGTCATGATGAC...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GCCCCAGCCTCAGCCTCGGAAGAGTCGATGCTGCCAAAGTATTTGCTTGTGTGGGCTGCTGCTTCTGCATaGCTCGGAGCCGCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: APASASEESMLPKYLLVWAAASA*LGAAPD
Trigger: ATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGC...CCACACAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGGCTGAGGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCAGAGCCCGAGGCAGTTaGCCCTTCCGGACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLRARGS*PFRTQE
Trigger: CTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCT...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCCTTGGCCCCGCCTTaGGCCTCCTCGCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSALAPP*ASSQPS
Trigger: AGAGGGCTGCGAGGAGGCCCAAGGCGGGGCCAAGGC...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGGCTCAGCTGGAATATaGAGAGGCCACTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLGSAGI*RGHFSS
Trigger: GCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCC...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGAGAAGCTAGCGAGGGGCCTGTCCCTAGGCAGGGCCTAGTGGTGGAAGCAACACTGAAGTCGCTTACCTaGAGACAGCACCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GEASEGPVPRQGLVVEATLKSLT*RQHLCL
Trigger: CAGGCAGAGGTGCTGTCTCCAGGTAAGCGACTTCAG...TGTTGCTTCCACCACTAGGCCCTGCCTAGGGACAGGCCCCTCGCTAGCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp TGGGGAGAAGCTAGCGAGGGGCCTGTCCCTAGGCAGGGCCTAGTGGTGGAAGCACAACTGACTCCTAAGTaGGCATACTTCCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: WGEASEGPVPRQGLVVEAQLTPK*AYFLPL
Trigger: CAGGGGCAGGAAGTATGCCCACTTAGGAGTCAGTTG...TGCTTCCACCACTAGGCCCTGCCTAGGGACAGGCCCCTCGCTAGCTTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp GGAGAAGCTAGCGAGGGGCCTGTCCCTAGGCAGGGCCTAGTGGTGGAAGCAACACAATGGAGTGAAGAGTaGGGCTGGAAAGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GEASEGPVPRQGLVVEATQWSEE*GWKAQS
Trigger: GGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTG...TGTTGCTTCCACCACTAGGCCCTGCCTAGGGACAGGCCCCTCGCTAGCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAAGGACACATGGACAGATaGCTCTGGTCCGCCAAACTC +
Preference number: 4 (lower is better)
Translates to: RNKARERLHEGSSWGCAEGHMDR*LWSAKL
Trigger: GAGTTTGGCGGACCAGAGCCATCTGTCCATGTGTCC...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGGTGCGGGGCCGTGGTaGCAGCCAAGGGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKGAGPW*QPRAEG
Trigger: TCCCTCAGCCCTTGGCTGCCACCACGGCCCCGCACC...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581082.5
CDS-3UTR TCA 90 bp GAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTCCTTGCCCGGGCTaGCTGTTCACTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ESLSWTPGDGPRMESSWCSPCPG*LFTAAA
Trigger: GGCTGCAGCAGTGAACAGTCAGCCCGGGCAAGGACT...GCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGTCATGAGTTCCTTCTaGGTCCTTGCCCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWVMSSF*VLARAD
Trigger: GTCAGCCCGGGCAAGGACTCAGAAGGAACTCATGAC...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp CTGAGGGAGCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGACTCGAAGTGCTGTCATaGGTTCCTTCTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LRELWKSCRVHAACPGLGLEVLS*VPSESL
Trigger: CAAGGACTCAGAAGGAACTCATGACAGCACTTCGAG...TCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp GCTGGGCCTGGGGCTAGGCCAGGCAGGTCCTCCATCATGATGATGTCTTTCTTGGCGGCAGTCGAAGCTTaGGCTCTCGAAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: AGPGARPGRSSIMMMSFLAAVEA*ALEVLS
Trigger: TGACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGC...CAAGAAAGACATCATCATGATGGAGGACCTGCCTGGCCTAGCCCCAGGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp CGAGGCTGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGAAGGTATCCTGGTTCTaGAGTGTGTACTCAGACGTG +
Preference number: 4 (lower is better)
Translates to: RGCGACAGARVLLQQKFEKVSWF*SVYSDV
Trigger: CACGTCTGAGTACACACTTCAGAACCAGGATACCTT...CTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTCG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp ACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCGAAGGAGACAGCCACTaGGAAGGTATCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TQFPPLVLRKPRLLLLHGEGDSH*EGILVL
Trigger: CAGAACCAGGATACCTTCTCAGTGGCTGTCTCCTTC...GCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAATGCAGGGGCCCCATCTaGGACCCGGATCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GIPPAHRGRILPSLQWSECRGPI*DPDLGH
Trigger: GTGACCAAGATCCGGGTCTCAGATGGGGCCCCTGCA...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCAGCTGGTGTCCATGGTaGCATACTCCCCGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVSWCPW*HTPRCG
Trigger: CCCGCAACGGGGAGTATGTCACCATGGACACCAGCT...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp TTAGTGGTGCTGGGGAGGTTGCAGCTCTCCAGGTACCTGAGGATGCTGTCCAGGAGCTCTCCAGGTACCTaGGGATGCTGTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LVVLGRLQLSRYLRMLSRSSPGT*GCCPGS
Trigger: ACTGCCTGGACAGCATCCTCAGGTACCTGGAGAGCT...CCTGGACAGCATCCTCAGGTACCTGGAGAGCTGCAACCTCCCCAGCACCACTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGAGCTACACTGACTGGTaGCGGACACCACACTCTCCG +
Preference number: 4 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWSYTDW*RTPHSP
Trigger: CGGAGAGTGTGGTGTCCGTCACCAGTCAGTGTAGCT...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCGGTCTCGGAAGCGGCTaGGGAAGGCTTGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVGLGSG*GRLALP
Trigger: AGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACC...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GTGACCAGGATCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGGGTCTCGGAAGCGGCTaGGGAAGGCTTGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VTRILGAAPTVHTGHHIKGLGSG*GRLALP
Trigger: AGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACC...CTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCGATTGGAGGACTCAGTaGCCTCCGCCTCGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLDWRTQ*PPPRSP
Trigger: TGGCGAGCGAGGCGGAGGTCACTGAGTCCTCCAATC...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTGCAGGGCTGAGTCCTTaGCGTTGCCTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRIAGLSP*RCLRRS
Trigger: GCTCCTCCTCAGGCAACGGCAAGGACTCAGCCCTGC...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp AACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGCGAGAGTTTGTGCTCTTaGTGCTCTCAGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NRGCCFCMARSRSRSCFSESLCS*CSQWSP
Trigger: TGGAGACCACTGAGAGCAGCAAGAGCACAAACTCTC...GCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCGTGGACGGGTTGTCCTaGTCTGAGCTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVVDGLS*SELALR
Trigger: CCTGAGTGCCAGCTCAGAGCAGGACAACCCGTCCAC...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCGGGCTGACTGTTCACTaGTGCAGCCACTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVGLTVH*CSHWWT
Trigger: CGTCCACCAGTGGCTGCAGCAGTGAACAGTCAGCCC...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGCAGGCCAGTGCGTACTaGAGCGTGGCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGQASAY*SVARVP
Trigger: TGGGACCCTGGCCACGCTGCAGTACGCACTGGCCTG...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CTTGAAGCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCACAGGCCAGTGCGTACTaGAGCGTGGCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LEAQTPPRVGPESMHVSSQASAY*SVARVP
Trigger: TGGGACCCTGGCCACGCTGCAGTACGCACTGGCCTG...TGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGCTTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTGGTTGGCCTGCACCTaGTTGACACAGGCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQWLACT*LTQASA
Trigger: CGCACTGGCCTGTGTCAAGCAGGTGCAGGCCAACCA...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGTACTCAGACGTGATGTaGTCCAGCTCCTCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQYSDVM*SSSSRV
Trigger: TACCCTGGAGGAGCTGGAGCACATCACGTCTGAGTA...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTGGAACACGTCCCGCTTaGAACGCAGCAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRIGTRPA*NAAGRL
Trigger: CAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCC...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGGAACACGTCCCGCTTaGAACGCAGCAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: LLRKEQGQGEVTRGVELGGTRPA*NAAGRL
Trigger: CAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCC...CCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp ATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTGCACAGCACGTAACCCGAATGGATaGGCTCTGCAATCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ITSRARGSWPFRTQECTARNPNG*ALQSAG
Trigger: GCCTGCTGATTGCAGAGCGCATCCATTCGGGTTACG...TGCTGTGCACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGGGTCGGTCCTCAGGATaGAGGAACAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQGRSSG*RNRSTG
Trigger: CCCAGTGCTCCTGTTCCTGCATCCTGAGGACCGACC...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGGGCTGGCCCGCCAACTaGAGAATCTTCTTGTGGATA +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQGWPAN*RIFLWI
Trigger: TATCCACAAGAAGATTCTGCAGTTGGCGGGCCAGCC...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAATTGCGGCTCCAGGGGTaGACAAAGCCAGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GIPPAHRGRILPSLQWSELRLQG*TKPAQL
Trigger: CAGCTGGGCTGGCTTTGTGCACCCCTGGAGCCGCAA...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GCTGGGCCTGGGGCTAGGCCAGGCAGGTCCTCCATCATGATGATGTCTTTCTTGACTGGACCTGTCCTCTaGCTGTCGTCGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AGPGARPGRSSIMMMSFLTGPVL*LSSSEA
Trigger: AGCCTCTGACGACGACAGGCAGAGGACAGGTCCAGT...CAAGAAAGACATCATCATGATGGAGGACCTGCCTGGCCTAGCCCCAGGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCACTGGAGCCGGAAAGTaGGTCCTGATTGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFTGAGK*VLIGGL
Trigger: GAGTCCTCCAATCAGGACGCACTTTCCGGCTCCAGT...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTGCGTCGAGCGCGAGTCCTCTTaGAGCAGAAGTTCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RVLLQQKFEQVTGAGKCVERESS*SRSSSR
Trigger: CCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTC...GACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCCCTCGGAAGAGTCGATaGTGCCAAAGTATTTGCTTG +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLPRKSR*CQSICL
Trigger: CAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGG...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGGAACCCCCGGGTCCTaGTTGGGCCTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSGTPGS*LGLRLS
Trigger: GGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGTTCC...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAATCTTGCTGCTCTCAGTaGTCTCCAGCAGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: RSASPLAAEVRAGHWSRKSCCSQ*SPAGLS
Trigger: ACTCAGCCCTGCTGGAGACCACTGAGAGCAGCAAGA...TTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCAATGGAACTGCTGGGTaGGGATGGGCTCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCNGTAG*GWALRV
Trigger: AACTCTCAGAGCCCATCCCCACCCAGCAGTTCCATT...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGAGGCAATGGAACTGCTaGGTGGGGATGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWRQWNC*VGMGSE
Trigger: CTCAGAGCCCATCCCCACCCAGCAGTTCCATTGCCT...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGGGAGGCTGTAGGCAATaGAACTGCTGGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: LRKEQGQGEVTRGVELGVGGCRQ*NCWVGM
Trigger: CATCCCCACCCAGCAGTTCCATTGCCTACAGCCTCC...CACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTTGCTGCAGCCACTGGTaGACGGGTTGTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSCCSHW*TGCPAL
Trigger: CAGAGCAGGACAACCCGTCCACCAGTGGCTGCAGCA...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGCCCCTGTGCCCCAGGTaGGCAGGCGAGATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKPLCPR*AGEMEQ
Trigger: CTGCTCCATCTCGCCTGCCCACCTGGGGCACAGGGG...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGAAGACGGACTTCTCCTaGGTAAAGTCCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRKTDFS*VKSLRP
Trigger: AGGCCTCAGGGACTTTACCCAGGAGAAGTCCGTCTT...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp ACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCAAGACGGACTTCTCCTaGGTAAAGTCCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TQFPPLVLRKPRLLLLHGKTDFS*VKSLRP
Trigger: AGGCCTCAGGGACTTTACCCAGGAGAAGTCCGTCTT...GCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGTTAGGCGGAATGGCTaGTACCGAGGCCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LLPIEAVFCLACNGVKSGVRRNG*YRGPGS
Trigger: GGATCCAGGGCCTCGGTACCAGCCATTCCGCCTAAC...CCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCTGCAGAATCTTCTTGTaGATAGCCAGCATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLCRIFL*IASMRG
Trigger: ACCCCTCATGCTGGCTATCCACAAGAAGATTCTGCA...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAAAGCGGATAGGGGAGTaGTCAAAGGGCTGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GIPPAHRGRILPSLQWSEKRIGE*SKGWPA
Trigger: GGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTT...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGGCCGTGCGTACTTTGTaGCGGCCCAACACGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQAVRTL*RPNTKA
Trigger: AGCCTTCGTGTTGGGCCGCCACAAAGTACGCACGGC...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTCTGCTGGAAAGTCACTaGCGCAGGAGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VFCLACNGVKSGAGKPSPLLESH*RRRPRP
Trigger: GGGCCTGGGCCTCCTGCGCCAGTGACTTTCCAGCAG...AGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR CCA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGACTGCTGGAAAGTCACTaGCGCAGGAGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGLLESH*RRRPRP
Trigger: GGGCCTGGGCCTCCTGCGCCAGTGACTTTCCAGCAG...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAAAAAGCTGCTGGCCCTaGTGCTTCACCAGATGCACA +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLKSCWP*CFTRCT
Trigger: TGTGCATCTGGTGAAGCACCAGGGCCAGCAGCTTTT...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCAAAAGCTGCTGGCCCTaGTGCTTCACCAGATGCACA +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCKSCWP*CFTRCT
Trigger: TGTGCATCTGGTGAAGCACCAGGGCCAGCAGCTTTT...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGATCAATAAAAAGCTGCTaGCCCTGGTGCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGSIKSC*PWCFTR
Trigger: TCTGGTGAAGCACCAGGGCCAGCAGCTTTTTATTGA...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTGGTGCAGTTTCCTGCTGTAGGTAAGGCTGGACTGGATGAGCTCCTGCCTTCTCTCCAGCTCTGGGTCTaGGGATTGGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LVQFPAVGKAGLDELLPSLQLWV*GLAGKG
Trigger: GCCCTTCCCTGCCAATCCCCAGACCCAGAGCTGGAG...AGAAGGCAGGAGCTCATCCAGTCCAGCCTTACCTACAGCAGGAAACTGCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAAGGCTAGTGGGGCCTaGACGGGAGCAGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGKASGA*TGAEPA
Trigger: GGCGGGTTCTGCTCCCGTCCAGGCCCCACTAGCCTT...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTGGTCCCCACAGAGACTaGACCTGTCCTCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSGPHRD*TCPLPV
Trigger: GACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACC...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGGGTCCCCACAGAGACTaGACCTGTCCTCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQGPHRD*TCPLPV
Trigger: GACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACC...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCGGGCTGAGGGAGCTGTaGAAGAGCTGTCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVGLREL*KSCRVH
Trigger: GTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCC...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGAATAGCTGGATGGGGTTaGGAACAGATAGTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGIAGWG*EQIVRE
Trigger: CTCCCTAACTATCTGTTCCCAACCCCATCCAGCTAT...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGAGGGCGGGCAAGGATaGAGAAGGGGAGTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGEGGQG*RRGVRG
Trigger: GCCTCGCACTCCCCTTCTCCATCCTTGCCCGCCCTC...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCCTCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGGAGGGCGGGCAAGGATaGAGAAGGGGAGTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PSRVRFRLSWNMERPLQQEGGQG*RRGVRG
Trigger: GCCTCGCACTCCCCTTCTCCATCCTTGCCCGCCCTC...CTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGAGTGCACAGCACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGAAGTATTTGCTTGTGTaGCTGCTCTGGCTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: GVHSTQFPPLVLRKPRLLKYLLV*LLWLLR
Trigger: TCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTT...CAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCCAGTTCCCGCCGCTaGTCCTCAGAAAACCGAGGC +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRIPSSRR*SSENRG
Trigger: GCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGG...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTGAGAGCTTGAAGCCTTaGCCCCGCCTTGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRIESLKP*PRLGPP
Trigger: AGGAGGCCCAAGGCGGGGCCAAGGCTTCAAGCTCTC...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCATTCCTCTCCAAAGGTaGGAGGTGACACTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCIPLQR*EVTLLW
Trigger: CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAAT...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGAACAGCTGAGAACGCCTaGGTCCCACCTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: MERPLQQLVSNFVQGREGTAENA*VPPEGQ
Trigger: CTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGT...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAAGACCCCACCCAGAGTTaGCCCAGAATCTATGCATGT +
Preference number: 4 (lower is better)
Translates to: RNKARERLHEGSSWGCAEDPTQS*PRIYAC
Trigger: ACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTC...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGAGAAGATCTAAGTCTCTaGGGGTTGAGAAGTTCGATC +
Preference number: 4 (lower is better)
Translates to: GSCLGLRLSSHLGRRWEREDLSL*GLRSSI
Trigger: GATCGAACTTCTCAACCCTCAGAGACTTAGATCTTC...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317276.9
CDS-3UTR TCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGGGACTCATTGCCACTTaGACCATTGCTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRGLIAT*TIAVGI
Trigger: GATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCC...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAAGGACTCATTGCCACTTaGACCATTGCTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: RNKARERLHEGSSWGCAEGLIAT*TIAVGI
Trigger: GATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCC...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GTCTTTCTTGGTCCCCACAGAGACTGGACCTGTCCTCTGCCTGTCGTCGTCAGACTGTGTGAGCTCCGCTaGGATGCGCCTCTAGACTCA +
Preference number: 4 (lower is better)
Translates to: VFLGPHRDWTCPLPVVVRLCELR*DAPLDS
Trigger: TGAGTCTAGAGGCGCATCTCAGCGGAGCTCACACAG...TCTGACGACGACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACCAAGAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp CTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGTCATGAGTTCCTTCTaGGTCCTTGCCCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LLPIEAVFCLACNGVKSGVMSSF*VLARAD
Trigger: GTCAGCCCGGGCAAGGACTCAGAAGGAACTCATGAC...CCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCCTCGAAGTGCTGTCATaGGTTCCTTCTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCLEVLS*VPSESL
Trigger: CAAGGACTCAGAAGGAACTCATGACAGCACTTCGAG...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGTGCAGGGGCCCCATCTaGGACCCGGATCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGCRGPI*DPDLGH
Trigger: GTGACCAAGATCCGGGTCTCAGATGGGGCCCCTGCA...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGAGCTGGTGTCCATGGTaGCATACTCCCCGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVSWCPW*HTPRCG
Trigger: CCCGCAACGGGGAGTATGTCACCATGGACACCAGCT...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp TGTCTCCCCGCAATAAATAAGTGCAGCCCCAACCCTCAAGAGTCAGATTCAGGCTGGGGGCCGGGGGAGTaGACACGTCCTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: CLPAINKCSPNPQESDSGWGPGE*TRPHSG
Trigger: CCCTGAATGAGGACGTGTTCACTCCCCCGGCCCCCA...GCCTGAATCTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCAGCTCTCCAGGTACCTaGGGATGCTGTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVSSPGT*GCCPGS
Trigger: ACTGCCTGGACAGCATCCTCAGGTACCTGGAGAGCT...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGAGCTACACTGACTGGTaGCGGACACCACACTCTCCG +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQSYTDW*RTPHSP
Trigger: CGGAGAGTGTGGTGTCCGTCACCAGTCAGTGTAGCT...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR TCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGGAGCTGAAGCTACACTaGCTGGTGACGGACACCACA +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLELKLH*LVTDTT
Trigger: TGTGGTGTCCGTCACCAGTCAGTGTAGCTTCAGCTC...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR TCA 90 bp TCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTCGCTCGCCAAGGGCTaGGGGAGCTGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SHGLLEMVPEWSLAGAVSSLAKG*GSCGRA
Trigger: AGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGA...GGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTGTTCTGGTGGTGGCGTaGGCGCTTGGCTTTGGATCG +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRIVLVVA*ALGFGS
Trigger: CGATCCAAAGCCAAGCGCTCACGCCACCACCAGAAC...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGAGATTGGAGGACTCAGTaGCCTCCGCCAGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MERPLQQLVSNFVQGREGDWRTQ*PPPVWP
Trigger: AGGCCAGACTGGCGGAGGTCACTGAGTCCTCCAATC...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTCCGGAAAGTGCGTCCTaGTTGGAGGACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSPESAS*LEDSVT
Trigger: GGTCACTGAGTCCTCCAATCAGGACGCACTTTCCGG...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp CCCTCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGTCTGGCTGCTGCGAGTaGTGCTGGCTGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PSRVRFRLSWNMERPLQQSGCCE*CWLRCC
Trigger: GCAGCACCTCAGCCAGCATCACTCGCAGCAGCCAGA...CTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGACAAGTCCTGAGAGCTTaGAGCCTTGGCCCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: MERPLQQLVSNFVQGREGQVLRA*SLGPAL
Trigger: CAAGGCGGGGCCAAGGCTTCAAGCTCTCAGGACTTG...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GTCGATGCTGCCAAAGTATTTGCTTGTGTGGCTGCTCTGGCTGCTGCGAGTGATTCCAAAGGTGGGAGGTaGCACTCCTCTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VDAAKVFACVAALAAASDSKGGR*HSSGLG
Trigger: GCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGA...ATCACTCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCATCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp GCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGAAGCGGCTGTTCATCAGTGACAACTaGCTCCTAAGTGGGCATACT +
Preference number: 4 (lower is better)
Translates to: AVEELSSPRSLPRSRKRLFISDN*LLSGHT
Trigger: AGTATGCCCACTTAGGAGTCAGTTGTCACTGATGAA...CAGCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp AGGGCTGAGGGAGCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTGACAAGGGGATTTATTaGGAAAGGAACAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RAEGAVEELSSPRSLPRSDKGIY*ERNKAR
Trigger: CCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTC...AGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGTGCCACTTGAACCATTaGTGTTGGCATCGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQCHLNH*CWHRCH
Trigger: ATGACACCGATGCCAACAGCAATGGTTCAAGTGGCA...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp AAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGCAGGGCTGAGTCCTTaGCGTTGCCTGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KASHGLLEMVPEWSLAGAAGLSP*RCLRRS
Trigger: GCTCCTCCTCAGGCAACGGCAAGGACTCAGCCCTGC...TGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGTGTAGGCAATGGAACTaGTGGGTGGGGATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWCRQWN*WVGMGS
Trigger: AGAGCCCATCCCCACCCAGCAGTTCCATTGCCTACA...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCGTGGACGGGTTGTCCTaGTCTGAGCTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLVDGLS*SELALR
Trigger: CCTGAGTGCCAGCTCAGAGCAGGACAACCCGTCCAC...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTGCGTGGACGGGTTGTCCTaGTCTGAGCTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: HGLLEMVPEWSLAGAVSCVDGLS*SELALR
Trigger: CCTGAGTGCCAGCTCAGAGCAGGACAACCCGTCCAC...GCAGGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCTTGACACAGGCCAGTaGGTACTGCAGCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AVFCLACNGVKSGAGKPSLDTGQ*VLQRGQ
Trigger: CTGGCCACGCTGCAGTACGCACTGGCCTGTGTCAAG...ACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GAAGAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGGGAACACGTCCCGCTTaGAACGCAGCAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: EESLSWTPGDGPRMESSWGTRPA*NAAGRL
Trigger: CAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCC...CCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTCGAATGGATGCGCTCTaGAATCAGCAGGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSRMDAL*NQQAAR
Trigger: CCGTGCTGCCTGCTGATTGCAGAGCGCATCCATTCG...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp AGGTCTCGGAAGCGGCTGAGGAAGGCTTGCTCTTCCTTCTGTGTGTGCAGGGACAGGCAGCTGGGTGTGTaGCGCGTAGTGAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: RSRKRLRKACSSFCVCRDRQLGV*RVVKIL
Trigger: GAGGATTTTCACTACGCGGCACACACCCAGCTGCCT...GTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCGGCTGGCCCGCCAACTaGAGAATCTTCTTGTGGATA +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFGWPAN*RIFLWI
Trigger: TATCCACAAGAAGATTCTGCAGTTGGCGGGCCAGCC...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp TCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGAGCCCGAGGCGGCTGGCCCGCCAACTaGAGAATCTTCTTGTGGATA +
Preference number: 4 (lower is better)
Translates to: SWVLLPQSTQAITSRARGGWPAN*RIFLWI
Trigger: TATCCACAAGAAGATTCTGCAGTTGGCGGGCCAGCC...GCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGTTGCGGCTCCAGGGGTaGACAAAGCCAGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGLRLQG*TKPAQL
Trigger: CAGCTGGGCTGGCTTTGTGCACCCCTGGAGCCGCAA...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGACACGAAGGCTACCTTaGGGCTCCAGGGGTGCACAA +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQTRRLP*GSRGAQ
Trigger: TTGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGT...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGGACTCAATAAAAAGCTaGTGGCCCTGGTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQDSIKS*WPWCFT
Trigger: GGTGAAGCACCAGGGCCAGCAGCTTTTTATTGAGTC...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGCGGCTGAGGAAGGCTTaGTCTTCCTTCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLRLRKA*SSFCVC
Trigger: GCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCG...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp ACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTCGAGTCCACGCAGCCTaGCCAGGTCTCGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: TPPRVGPESMHVSSSVTTRVHAA*PGLGSG
Trigger: GCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCG...AGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTGAGCGCGAGTCCTCTTaGAGCAGAAGTTCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSERESS*SRSSSR
Trigger: CCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTC...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGTGCTGCCAAAGTATTTaGTTGTGTGGCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRCCQSI*LCGCSG
Trigger: GCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCA...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp ATCAGGGTGACCAGGATCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACGACTGGATGAGCTCCTaGCTTCTTCCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IRVTRILGAAPTVHTGHHDWMSS*LLPPPP
Trigger: TGGAGGAGGAGGAAGAAGGCAGGAGCTCATCCAGTC...GTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCACCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTTGGGCTGCGGAGTTCTaGTCTCTGCTCCCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSWAAEF*SLLPKR
Trigger: CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCA...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CTTGAAGCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCACCTGAGTCCTGCGTCTaGCTGCAGGGGATCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LEAQTPPRVGPESMHVSSPESCV*LQGISL
Trigger: GAGGGAGATCCCCTGCAGGCAGACGCAGGACTCAGG...TGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGCTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GTGGAAGCAACACCAGCCTGGGTCCCTGGAGCAGAAACACCTCCCTTAAGACCCCGGAAGATGGAGGCATaGTGGCAGATGGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VEATPAWVPGAETPPLRPRKMEA*WQMEEA
Trigger: TGCTTCCTCCATCTGCCAGCATGCCTCCATCTTCCG...GGGTCTTAAGGGAGGTGTTTCTGCTCCAGGGACCCAGGCTGGTGTTGCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTATCACAGCCAGTACCTaGTCGCAGGAGTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSITAST*SQECPP
Trigger: CGGAGGACACTCCTGCGACCAGGTACTGGCTGTGAT...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317276.9
CDS-3UTR CCA 90 bp GTGGAAGCAACACCAGCCTGGGTCCCTGGAGCAGAAACACCTCCCTTAAGACCCTCTTGCTGCTCTCAGTaGTCTCCAGCAGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VEATPAWVPGAETPPLRPSCCSQ*SPAGLS
Trigger: ACTCAGCCCTGCTGGAGACCACTGAGAGCAGCAAGA...GGGTCTTAAGGGAGGTGTTTCTGCTCCAGGGACCCAGGCTGGTGTTGCTTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp GAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCCACTGCTGCAGCCACTaGTGGACGGGTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ESLSWTPGDGPRMESSWCHCCSH*WTGCPA
Trigger: AGCAGGACAACCCGTCCACCAGTGGCTGCAGCAGTG...GCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGCTTGCCCCGGCGCTCTaGCGGCAGTCGAAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRLAPAL*RQSKLE
Trigger: CTCAAGCTTCGACTGCCGCCAGAGCGCCGGGGCAAG...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTGCGTTAGGCGGAATGGCTaGTACCGAGGCCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: HGLLEMVPEWSLAGAVSCVRRNG*YRGPGS
Trigger: GGATCCAGGGCCTCGGTACCAGCCATTCCGCCTAAC...GCAGGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGCTGAGACCCGGATCTTaGTCACATACGGGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWLRPGS*SHTGLG
Trigger: GCCTAACCCCGTATGTGACCAAGATCCGGGTCTCAG...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GCTGGGCCTGGGGCTAGGCCAGGCAGGTCCTCCATCATGATGATGTCTTTCTTGCTGAGACCCGGATCTTaGTCACATACGGGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: AGPGARPGRSSIMMMSFLLRPGS*SHTGLG
Trigger: GCCTAACCCCGTATGTGACCAAGATCCGGGTCTCAG...CAAGAAAGACATCATCATGATGGAGGACCTGCCTGGCCTAGCCCCAGGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp CGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAACTTTCATCCACATCCTaGAAGAGGCAGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RSASPLAAEVRAGHWSRKLSSTS*KRQLGV
Trigger: CACACCCAGCTGCCTCTTCCAGGATGTGGATGAAAG...TTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCGAGTGGTCAAAGGGCTaGCCCGCCAACTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVEWSKG*PANCRI
Trigger: GATTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTC...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGACTCCGCTGTGGAGAGGGCCTaGGGATGTCACGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: PRVGPESMHVSSSVTTDSAVERA*GCHGAD
Trigger: GTCGGCGCCGTGACATCCCCAGGCCCTCTCCACAGC...GGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TGTCTCCCCGCAATAAATAAGTGCAGCCCCAACCCTCAAGAGTCAGATTCAGGCCTGCTGGAAAGTCACTaGCGCAGGAGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CLPAINKCSPNPQESDSGLLESH*RRRPRP
Trigger: GGGCCTGGGCCTCCTGCGCCAGTGACTTTCCAGCAG...GCCTGAATCTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCACGGCGGATCTTTCTTaGTCCCCACAGAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCTADLS*SPQRLD
Trigger: GTCCAGTCTCTGTGGGGACCAAGAAAGATCCGCCGT...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR CCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGCACTCTCCGCCTTATTaGCCAGGGCGAGCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGHSPPY*PGRAGS
Trigger: TGAGCCCGCTCGCCCTGGCCAATAAGGCGGAGAGTG...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR CCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGGGACAGCACGGCCTTaGTCAGCCCCACTGGACGGT +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSGTARP*SAPLDG
Trigger: ACCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCC...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGAGGGCTGAGGGAGCTGTaGAAGAGCTGTCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: MERPLQQLVSNFVQGREGGLREL*KSCRVH
Trigger: GTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCC...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGAGTGAGCGCTTGGCTTTaGATCGGCAGTGGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: MERPLQQLVSNFVQGREGVSAWL*IGSGVG
Trigger: GCCGACACCACTGCCGATCCAAAGCCAAGCGCTCAC...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGAGGTGGCGTGAGCGCTTaGCTTTGGATCGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: MERPLQQLVSNFVQGREGGGVSA*LWIGSG
Trigger: ACCACTGCCGATCCAAAGCCAAGCGCTCACGCCACC...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGGGCTGGACAACCGCTaGGAAGGGGGTAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSGLDNR*EGGSGW
Trigger: CCAGCCACTACCCCCTTCCCAGCGGTTGTCCAGCCC...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTGTGCTGCCCCCTTCATaGGAGCCTGAACCAGACCCA +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRIVLPPS*EPEPDP
Trigger: TGGGTCTGGTTCAGGCTCCCATGAAGGGGGCAGCAC...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGAAGTATTTGCTTGTGTaGCTGCTCTGGCTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRKYLLV*LLWLLR
Trigger: TCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTT...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGAGCCAAATGGGATCCTaGAGCACGTACTTAATCACC +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQSQMGS*STYLIT
Trigger: GGTGATTAAGTACGTGCTCCAGGATCCCATTTGGCT...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGCCCAGTTCCCGCCGCTaGTCCTCAGAAAACCGAGGC +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGPSSRR*SSENRG
Trigger: GCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGG...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGGAGATGGTCCCAGAATaGAGTCTAGCTGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKREMVPE*SLAGAV
Trigger: AACTGCACCAGCTAGACTCCATTCTGGGACCATCTC...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp ACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTCCAGGAGGCCCCAGGTaGCTACCTCGCTCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TPPRVGPESMHVSSSVTTPGGPR*LPRSPR
Trigger: CCTTGGCGAGCGAGGTAGCCACCTGGGGCCTCCTGG...AGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCGAAGCAACACCAGCCTaGGTCCCTGGAGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCEATPA*VPGAET
Trigger: TGTTTCTGCTCCAGGGACCCAGGCTGGTGTTGCTTC...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGCTGAAGTCGCTTACCTaGAGACAGCACCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LRKEQGQGEVTRGVELGVLKSLT*RQHLCL
Trigger: CAGGCAGAGGTGCTGTCTCCAGGTAAGCGACTTCAG...CACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGCAATGGAGTGAAGAGTaGGGCTGGAAAGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LRKEQGQGEVTRGVELGVQWSEE*GWKAQS
Trigger: GGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTG...CACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGCTGCCTAGCTTGCAATaGAGTGAAGAGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRKEQGQGEVTRGVELGVLPSLQ*SEEWGW
Trigger: CCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAG...CACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR CAA 72 bp GAGGAGGCACATTTACGCTTAGTGGTGCTGGGGAGGTaGCAGCTCTCCAGGTACCTGAGGATGCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EEAHLRLVVLGR*QLSRYLRMLSR
Trigger: CCTGGACAGCATCCTCAGGTACCTGGAGAGCTGCAACCTCCCCAGCACCACTAAGCGTAAATGTGCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGGCCTGGAGGCTTGGCTaGGGGAGTGAGGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGAWRLG*GSEVED
Trigger: ATCTTCCACCTCACTCCCTCAGCCAAGCCTCCAGGC...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGAGTCCTTGCCCGGGCTaGCTGTTCACTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELSPCPG*LFTAAA
Trigger: GGCTGCAGCAGTGAACAGTCAGCCCGGGCAAGGACT...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp TGTCTCCCCGCAATAAATAAGTGCAGCCCCAACCCTCAAGAGTCAGATTCAGGCAGTCCTTGCCCGGGCTaGCTGTTCACTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CLPAINKCSPNPQESDSGSPCPG*LFTAAA
Trigger: GGCTGCAGCAGTGAACAGTCAGCCCGGGCAAGGACT...GCCTGAATCTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTGTCATGAGTTCCTTCTaGGTCCTTGCCCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: AVFCLACNGVKSGAGKPSVMSSF*VLARAD
Trigger: GTCAGCCCGGGCAAGGACTCAGAAGGAACTCATGAC...ACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGATGGCCTGCACCTGCTTaGCACAGGCCAGTGCGTACT +
Preference number: 4 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGWPAPA*HRPVRT
Trigger: AGTACGCACTGGCCTGTGTCAAGCAGGTGCAGGCCA...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp TTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGGAAGGAGACAGCCACTaGGAAGGTATCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LRKEQGQGEVTRGVELGVEGDSH*EGILVL
Trigger: CAGAACCAGGATACCTTCTCAGTGGCTGTCTCCTTC...CACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTCCCAGACAGCGCTGCTaGCGGCGGATCTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: VFCLACNGVKSGAGKPSPPRQRC*RRIFLG
Trigger: ACCAAGAAAGATCCGCCGTCAGCAGCGCTGTCTGGG...AGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR TCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGGGTCTCGGAAGCGGCTaGGGAAGGCTTGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGGLGSG*GRLALP
Trigger: AGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACC...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCGAGTGATGCTGGCTaGGGTGCTGCCCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSASDAG*GAAPFM
Trigger: CATGAAGGGGGCAGCACCTCAGCCAGCATCACTCGC...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp CTGGTGCAGTTTCCTGCTGTAGGTAAGGCTGGACTGGATGAGCTCCTGCCTTCTCCTGGTAGGTCATCATaGCGCGCTGGTCAGCATTGG +
Preference number: 4 (lower is better)
Translates to: LVQFPAVGKAGLDELLPSPGRSS*RAGQHW
Trigger: CCAATGCTGACCAGCGCGTCATGATGACCTACCAGG...AGAAGGCAGGAGCTCATCCAGTCCAGCCTTACCTACAGCAGGAAACTGCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp GTGACCAGGATCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGTCCATAGCCAAGTCCTaGGAGCTTGAAGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VTRILGAAPTVHTGHHIKSIAKS*ELEALA
Trigger: GGCCAAGGCTTCAAGCTCTCAGGACTTGGCTATGGA...CTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTGAGTTCTaGGAATTGGGACATAGGAGA +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLATSEF*ELGHRR
Trigger: TCTCCTATGTCCCAATTCTCAGAACTCAGATGTGGC...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp CTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGGCCACATCTGAGTTCTaGGAATTGGGACATAGGAGA +
Preference number: 4 (lower is better)
Translates to: LRKPRLLLLHGSEPLPILATSEF*ELGHRR
Trigger: TCTCCTATGTCCCAATTCTCAGAACTCAGATGTGGC...CAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp TGTCTCCCCGCAATAAATAAGTGCAGCCCCAACCCTCAAGAGTCAGATTCAGGCTCCAAAGGTGGGAGGTaGCACTCCTCTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLPAINKCSPNPQESDSGSKGGR*HSSGLG
Trigger: GCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGA...GCCTGAATCTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTTGTAGGCAATGGAACTaGTGGGTGGGGATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSCRQWN*WVGMGS
Trigger: AGAGCCCATCCCCACCCAGCAGTTCCATTGCCTACA...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTATTCCTGGTTGGCCTaGACCTGCTTGACACAGGCC +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQYSWLA*TCLTQA
Trigger: GGCCTGTGTCAAGCAGGTGCAGGCCAACCAGGAATA...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp TTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGCGAATGGATGCGCTCTaGAATCAGCAGGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: LLRKEQGQGEVTRGVELGRMDAL*NQQAAR
Trigger: CCGTGCTGCCTGCTGATTGCAGAGCGCATCCATTCG...CCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGCGTAACCCGAATGGATaGGCTCTGCAATCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQRNPNG*ALQSAG
Trigger: GCCTGCTGATTGCAGAGCGCATCCATTCGGGTTACG...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GTCTTTCTTGGTCCCCACAGAGACTGGACCTGTCCTCTGCCTGTCGTCGTCAGACGTAACCCGAATGGATaGGCTCTGCAATCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VFLGPHRDWTCPLPVVVRRNPNG*ALQSAG
Trigger: GCCTGCTGATTGCAGAGCGCATCCATTCGGGTTACG...TCTGACGACGACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACCAAGAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTAGGCAGCTGGGTGTGTaGCGCGTAGTGAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSRQLGV*RVVKIL
Trigger: GAGGATTTTCACTACGCGGCACACACCCAGCTGCCT...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCGGCTGGCCCGCCAACTaGAGAATCTTCTTGTGGATA +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCGWPAN*RIFLWI
Trigger: TATCCACAAGAAGATTCTGCAGTTGGCGGGCCAGCC...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTACACGAAGGCTACCTTaGGGCTCCAGGGGTGCACAA +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRITRRLP*GSRGAQ
Trigger: TTGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGT...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCTGCATCACCCCCGTTaGTATCACTGGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: AVFCLACNGVKSGAGKPSLHHPR*YHWRTQ
Trigger: CTGGGTCCTCCAGTGATAGCAACGGGGGTGATGCAG...ACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTGCCTGCATCACCCCCGTTaGTATCACTGGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: HGLLEMVPEWSLAGAVSCLHHPR*YHWRTQ
Trigger: CTGGGTCCTCCAGTGATAGCAACGGGGGTGATGCAG...GCAGGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTATGGTGCTTCACCAGATaGACATCCTTACAGATCTGC +
Preference number: 4 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLWCFTR*TSLQIC
Trigger: GCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCA...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGTGGTGCTTCACCAGATaGACATCCTTACAGATCTGC +
Preference number: 4 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKWCFTR*TSLQIC
Trigger: GCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCA...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGACTCAATAAAAAGCTaGTGGCCCTGGTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWADSIKS*WPWCFT
Trigger: GGTGAAGCACCAGGGCCAGCAGCTTTTTATTGAGTC...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GTCTTTCTTGGTCCCCACAGAGACTGGACCTGTCCTCTGCCTGTCGTCGTCAGACGGCTGAGGAAGGCTTaGTCTTCCTTCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VFLGPHRDWTCPLPVVVRRLRKA*SSFCVC
Trigger: GCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCG...TCTGACGACGACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACCAAGAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR GCA 90 bp TGCGGAGCCTGTGCCGGAGCGCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCCGGAAGAGTCGATGCTaGCAAAGTATTTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: CGACAGARVLLQQKFEQVRKSRC*QSICLC
Trigger: ACACAAGCAAATACTTTGGCAGCATCGACTCTTCCG...GACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp CAGTCCACACAGGCCATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCCTCGGAAGAGTCGATaGTGCCAAAGTATTTGCTTG +
Preference number: 4 (lower is better)
Translates to: QSTQAITSRARGSWPFRTPRKSR*CQSICL
Trigger: CAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGG...GGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTAGCCGCTCCCGATCCTaGTTCAGCACAGAGGTCATG +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRISRSRS*FSTEVM
Trigger: CATGACCTCTGTGCTGAAGCAGGATCGGGAGCGGCT...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCATTCCGGACCCAGGAGTaGACAGCACCCAGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSFRTQE*TAPSSR
Trigger: GCGGGAACTGGGTGCTGTGCACTCCTGGGTCCGGAA...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCAGGATCTTGGGTGCTaGTCCCACAGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLQDLGC*SHSPHR
Trigger: CCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTG...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp ACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTCTGCCCTCCTCTGGCTaGAGCCCGGAACCCCATCCT +
Preference number: 4 (lower is better)
Translates to: TPPRVGPESMHVSSSVTTLPSSG*SPEPHP
Trigger: AGGATGGGGTTCCGGGCTGCAGCCAGAGGAGGGCAG...AGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGACAGCACCTCTGCCTaGCCATCCCAGTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRDSTSA*PSQCHP
Trigger: GGGATGGCACTGGGATGGGCAGGCAGAGGTGCTGTC...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGCCTGAGTCCTGCGTCTaGCTGCAGGGGATCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTPESCV*LQGISL
Trigger: GAGGGAGATCCCCTGCAGGCAGACGCAGGACTCAGG...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTAACTCCTGTGGGCACTaGCAGCCTAGGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: AVFCLACNGVKSGAGKPSNSCGH*QPRHSS
Trigger: GGAGGAATGCCTAGGCTGGCAGTGCCCACAGGAGTT...ACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTTTGAACCATTGCTGTTaGCATCGGTGTCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWALNHCC*HRCHRP
Trigger: TGGCCGATGACACCGATGCCAACAGCAATGGTTCAA...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGACTGCTGGGTGGGGATaGGCTCTGAGAGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQTAGWG*ALRVCA
Trigger: AGCACAAACTCTCAGAGCCCATCCCCACCCAGCAGT...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGCACTGCTGCAGCCACTaGTGGACGGGTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGHCCSH*WTGCPA
Trigger: AGCAGGACAACCCGTCCACCAGTGGCTGCAGCAGTG...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCCTCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCACTGCTGCAGCCACTaGTGGACGGGTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSRVRFRLSWNMERPLQQHCCSH*WTGCPA
Trigger: AGCAGGACAACCCGTCCACCAGTGGCTGCAGCAGTG...CTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGGGCGAGATGGAGCAGTaGAACCATAGAAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLGEMEQ*NHRRLP
Trigger: TGGGAGTCTTCTATGGTTCCACTGCTCCATCTCGCC...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GTGACCAGGATCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGCTGAGACCCGGATCTTaGTCACATACGGGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: VTRILGAAPTVHTGHHIKLRPGS*SHTGLG
Trigger: GCCTAACCCCGTATGTGACCAAGATCCGGGTCTCAG...CTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GCTGGGCCTGGGGCTAGGCCAGGCAGGTCCTCCATCATGATGATGTCTTTCTTGCTTTCATCCACATCCTaGAAGAGGCAGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: AGPGARPGRSSIMMMSFLLSSTS*KRQLGV
Trigger: CACACCCAGCTGCCTCTTCCAGGATGTGGATGAAAG...CAAGAAAGACATCATCATGATGGAGGACCTGCCTGGCCTAGCCCCAGGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGCCGTGCGTACTTTGTaGCGGCCCAACACGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGAVRTL*RPNTKA
Trigger: AGCCTTCGTGTTGGGCCGCCACAAAGTACGCACGGC...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGCCCCGTTGCTATCACTaGAGGACCCAGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGPRCYH*RTQGCG
Trigger: TCCACAGCCCTGGGTCCTCCAGTGATAGCAACGGGG...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGAAAAGCTGCTGGCCCTaGTGCTTCACCAGATGCACA +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLKSCWP*CFTRCT
Trigger: TGTGCATCTGGTGAAGCACCAGGGCCAGCAGCTTTT...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCAATAAAAAGCTGCTaGCCCTGGTGCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCSIKSC*PWCFTR
Trigger: TCTGGTGAAGCACCAGGGCCAGCAGCTTTTTATTGA...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp ACAGGCCATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTGTCAATAAAAAGCTGCTaGCCCTGGTGCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: TGHHIKSPRQLALPDPGVSIKSC*PWCFTR
Trigger: TCTGGTGAAGCACCAGGGCCAGCAGCTTTTTATTGA...CACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGCTCCAGCTCTGGGTCTaGGGATTGGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKLQLWV*GLAGKG
Trigger: GCCCTTCCCTGCCAATCCCCAGACCCAGAGCTGGAG...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGCTCCAGCTCTGGGTCTaGGGATTGGCAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRLQLWV*GLAGKG
Trigger: GCCCTTCCCTGCCAATCCCCAGACCCAGAGCTGGAG...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGGGACAGCACGGCCTTaGTCAGCCCCACTGGACGGT +
Preference number: 4 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLGTARP*SAPLDG
Trigger: ACCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCC...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCCTCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGGGGCTGAGGGAGCTGTaGAAGAGCTGTCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PSRVRFRLSWNMERPLQQGLREL*KSCRVH
Trigger: GTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCC...CTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTTCGAGGAGAGAACACTaGGAGAGGGTAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRISRREH*ERVGLD
Trigger: GTCCAGCCCTACCCTCTCCCAGTGTTCTCTCCTCGA...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTCCCCATAAGGATAGCTaGATGGGGTTGGGAACAGAT +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWAPHKDS*MGLGTD
Trigger: ATCTGTTCCCAACCCCATCCAGCTATCCTTATGGGG...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCTTGTGTGGCTGCTCTaGCTGCTGCGAGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRILVWLL*LLRVML
Trigger: CAGCATCACTCGCAGCAGCCAGAGCAGCCACACAAG...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGCCAAATGGGATCCTaGAGCACGTACTTAATCACC +
Preference number: 4 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKSQMGS*STYLIT
Trigger: GGTGATTAAGTACGTGCTCCAGGATCCCATTTGGCT...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCAGCCAAATGGGATCCTaGAGCACGTACTTAATCACC +
Preference number: 4 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCSQMGS*STYLIT
Trigger: GGTGATTAAGTACGTGCTCCAGGATCCCATTTGGCT...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TGTCTCCCCGCAATAAATAAGTGCAGCCCCAACCCTCAAGAGTCAGATTCAGGCGCTGCTGCTTCTGCATaGCTCGGAGCCGCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: CLPAINKCSPNPQESDSGAAASA*LGAAPD
Trigger: ATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGC...GCCTGAATCTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCGAGATGGTCCCAGAATaGAGTCTAGCTGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFEMVPE*SLAGAV
Trigger: AACTGCACCAGCTAGACTCCATTCTGGGACCATCTC...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGAGCAGCTAGGGGCTaGAACCCCCGGGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVRAARG*NPRVLL
Trigger: AAGCAGGACCCGGGGGTTCCAGCCCCTAGCTGCTCT...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCGCACCAGGGACTCCATaGTCCACCAACCTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVAPGTP*STNLPH
Trigger: GTGGGGGAGGTTGGTGGACCATGGAGTCCCTGGTGC...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGAATCCAGTCCTAGACTaGGCAGAGGGCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LLRKEQGQGEVTRGVELGNPVLD*AEGRLQ
Trigger: CTGGAGCCTGCCCTCTGCCCAGTCTAGGACTGGATT...CCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCGAGTCCATGGACACATaGACAGATGGCTCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVESMDT*TDGSGP
Trigger: CGGACCAGAGCCATCTGTCCATGTGTCCATGGACTC...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGAGCAGGGTGAGTCCATaGACACATGGACAGATGGCT +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLSRVSP*THGQMA
Trigger: AGCCATCTGTCCATGTGTCCATGGACTCACCCTGCT...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR CAA 72 bp ATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTaGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: IPPAHRGRILPS*QWSEEWGWKAQ
Trigger: CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
3UTR CAA 72 bp GCCTCAGCCTCGGAAGAGTCGATGCTGCCAAAGTATTaGCTTGTGTGGCTGCTCTGGCTGCTGCGAGTGATG +
Preference number: 4 (lower is better)
Translates to: ASASEESMLPKY*LVWLLWLLRVM
Trigger: CATCACTCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGGCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
3UTR CAA 72 bp AGGCCAGGCAGGTCCTCCATCATGATGATGTCTTTCTaGGTCCCCACAGAGACTGGACCTGTCCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RPGRSSIMMMSF*VPTETGPVLCL
Trigger: CAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACCAAGAAAGACATCATCATGATGGAGGACCTGCCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCGCCTGGAGGCTTGGCTaGGGGAGTGAGGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVAWRLG*GSEVED
Trigger: ATCTTCCACCTCACTCCCTCAGCCAAGCCTCCAGGC...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp CAAATGGGATCCTGGAGCACGTACTTAATCACCTGGTCCCCAGGCTCAGCCCCGGGACTCATTGCCACTTaGACCATTGCTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: QMGSWSTYLITWSPGSAPGLIAT*TIAVGI
Trigger: GATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCC...CGGGGCTGAGCCTGGGGACCAGGTGATTAAGTACGTGCTCCAGGATCCCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp TTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGCTCGAAGTGCTGTCATaGGTTCCTTCTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LRKEQGQGEVTRGVELGVLEVLS*VPSESL
Trigger: CAAGGACTCAGAAGGAACTCATGACAGCACTTCGAG...CACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGTGGCCTGCACCTGCTTaGCACAGGCCAGTGCGTACT +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKWPAPA*HRPVRT
Trigger: AGTACGCACTGGCCTGTGTCAAGCAGGTGCAGGCCA...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGTGGCCTGCACCTGCTTaGCACAGGCCAGTGCGTACT +
Preference number: 4 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELWPAPA*HRPVRT
Trigger: AGTACGCACTGGCCTGTGTCAAGCAGGTGCAGGCCA...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCGTGTGTACTCAGACGTaGTGTGCTCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ESLSWTPGDGPRMESSWCVCTQT*CAPAPP
Trigger: TGGAGGAGCTGGAGCACATCACGTCTGAGTACACAC...GCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTAAGGTATCCTGGTTCTaGAGTGTGTACTCAGACGTG +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWAKVSWF*SVYSDV
Trigger: CACGTCTGAGTACACACTTCAGAACCAGGATACCTT...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000582719.5
CDS-3UTR TCA 90 bp GGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGGAAGGAGACAGCCACTaGGAAGGTATCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GRILPSLQWSEEWGWKAQEGDSH*EGILVL
Trigger: CAGAACCAGGATACCTTCTCAGTGGCTGTCTCCTTC...CTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGCTACACTGACTGGTaGCGGACACCACACTCTCCG +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGSYTDW*RTPHSP
Trigger: CGGAGAGTGTGGTGTCCGTCACCAGTCAGTGTAGCT...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCGAGCTGAAGCTACACTaGCTGGTGACGGACACCACA +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLELKLH*LVTDTT
Trigger: TGTGGTGTCCGTCACCAGTCAGTGTAGCTTCAGCTC...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR TCA 90 bp GAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCGAGCTGAAGCTACACTaGCTGGTGACGGACACCACA +
Preference number: 4 (lower is better)
Translates to: ESLSWTPGDGPRMESSWCELKLH*LVTDTT
Trigger: TGTGGTGTCCGTCACCAGTCAGTGTAGCTTCAGCTC...GCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp CCCTCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGAGCTGCATCTCGAGTTaGACAGTGGAGAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: PSRVRFRLSWNMERPLQQSCISS*TVESPG
Trigger: GCCCGGACTCTCCACTGTTCAACTCGAGATGCAGCT...CTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAAGCTGCATCTCGAGTTaGACAGTGGAGAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGSCISS*TVESPG
Trigger: GCCCGGACTCTCCACTGTTCAACTCGAGATGCAGCT...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGAGGTCAGCATTGGCCATaGGCAGCCAAATGGGATCCT +
Preference number: 4 (lower is better)
Translates to: MERPLQQLVSNFVQGREGGQHWP*AAKWDP
Trigger: AGGATCCCATTTGGCTGCTCATGGCCAATGCTGACC...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp TCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCAGTGGGTCATCAGGGTaGCCAGGATCTTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SHGLLEMVPEWSLAGAVSSGSSG*PGSWVL
Trigger: CAGCACCCAAGATCCTGGTCACCCTGATGACCCACT...GGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATCCATAGCCAAGTCCTaGGAGCTTGAAGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: MERPLQQLVSNFVQGREGSIAKS*ELEALA
Trigger: GGCCAAGGCTTCAAGCTCTCAGGACTTGGCTATGGA...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGGAGAGTTTGTGCTCTTaGTGCTCTCAGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLESLCS*CSQWSP
Trigger: TGGAGACCACTGAGAGCAGCAAGAGCACAAACTCTC...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGGGGCTGACTGTTCACTaGTGCAGCCACTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTGLTVH*CSHWWT
Trigger: CGTCCACCAGTGGCTGCAGCAGTGAACAGTCAGCCC...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGCTTGACACAGGCCAGTaGGTACTGCAGCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKLDTGQ*VLQRGQ
Trigger: CTGGCCACGCTGCAGTACGCACTGGCCTGTGTCAAG...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGTGGTTGGCCTGCACCTaGTTGACACAGGCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELWLACT*LTQASA
Trigger: CGCACTGGCCTGTGTCAAGCAGGTGCAGGCCAACCA...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCTACTCAGACGTGATGTaGTCCAGCTCCTCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVYSDVM*SSSSRV
Trigger: TACCCTGGAGGAGCTGGAGCACATCACGTCTGAGTA...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCTACTCAGACGTGATGTaGTCCAGCTCCTCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: EAVFCLACNGVKSGAGKPYSDVM*SSSSRV
Trigger: TACCCTGGAGGAGCTGGAGCACATCACGTCTGAGTA...GGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGACGCAGCAGGACGGCTaGCTGCTCCGAAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGTQQDG*LLRNVD
Trigger: GTCTACATTTCGGAGCAGGCAGCCGTCCTGCTGCGT...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GTCGATGCTGCCAAAGTATTTGCTTGTGTGGCTGCTCTGGCTGCTGCGAGTGATACGCAGCAGGACGGCTaGCTGCTCCGAAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: VDAAKVFACVAALAAASDTQQDG*LLRNVD
Trigger: GTCTACATTTCGGAGCAGGCAGCCGTCCTGCTGCGT...ATCACTCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCATCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGGTCGGTCCTCAGGATaGAGGAACAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKGRSSG*RNRSTG
Trigger: CCCAGTGCTCCTGTTCCTGCATCCTGAGGACCGACC...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGGACTCAATAAAAAGCTaGTGGCCCTGGTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLDSIKS*WPWCFT
Trigger: GGTGAAGCACCAGGGCCAGCAGCTTTTTATTGAGTC...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR GCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCGGCTGAGGAAGGCTTaGTCTTCCTTCTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLRLRKA*SSFCVC
Trigger: GCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCG...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCACTGGAGCCGGAAAGTaGGTCCTGATTGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLTGAGK*VLIGGL
Trigger: GAGTCCTCCAATCAGGACGCACTTTCCGGCTCCAGT...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp TCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCCAGGATCTTGGGTGCTaGTCCCACAGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: SHGLLEMVPEWSLAGAVSQDLGC*SHSPHR
Trigger: CCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTG...GGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGACGGAGTTCTGCTCTCTaGTCCCTAAGAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGRSSAL*SLRGQR
Trigger: CCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCG...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTAGGCATTCCTCCTaGCCATCGAGGCCGTATTCT +
Preference number: 4 (lower is better)
Translates to: AVFCLACNGVKSGAGKPSPRHSS*PSRPYS
Trigger: AGAATACGGCCTCGATGGGCAGGAGGAATGCCTAGG...ACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGAACGCAGCAGGACGGCTaGCTGGTTCTGAAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: MERPLQQLVSNFVQGREGTQQDG*LVLKCV
Trigger: TACACACTTCAGAACCAGGCAGCCGTCCTGCTGCGT...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581082.5
CDS-3UTR CCA 90 bp CAAATGGGATCCTGGAGCACGTACTTAATCACCTGGTCCCCAGGCTCAGCCCCGTTGAACCATTGCTGTTaGCATCGGTGTCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: QMGSWSTYLITWSPGSAPLNHCC*HRCHRP
Trigger: TGGCCGATGACACCGATGCCAACAGCAATGGTTCAA...CGGGGCTGAGCCTGGGGACCAGGTGATTAAGTACGTGCTCCAGGATCCCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp TTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGACTGCTGGGTGGGGATaGGCTCTGAGAGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LLRKEQGQGEVTRGVELGTAGWG*ALRVCA
Trigger: AGCACAAACTCTCAGAGCCCATCCCCACCCAGCAGT...CCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CTTGAAGCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCAGGAGGCTGTAGGCAATaGAACTGCTGGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: LEAQTPPRVGPESMHVSSGGCRQ*NCWVGM
Trigger: CATCCCCACCCAGCAGTTCCATTGCCTACAGCCTCC...TGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGCTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCACACTGCTGCAGCCACTaGTGGACGGGTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSHCCSH*WTGCPA
Trigger: AGCAGGACAACCCGTCCACCAGTGGCTGCAGCAGTG...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTGGCGAGATGGAGCAGTaGAACCATAGAAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSGEMEQ*NHRRLP
Trigger: TGGGAGTCTTCTATGGTTCCACTGCTCCATCTCGCC...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGCTGAGACCCGGATCTTaGTCACATACGGGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVLRPGS*SHTGLG
Trigger: GCCTAACCCCGTATGTGACCAAGATCCGGGTCTCAG...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCTGCTCTGACAGCTCCTaGATATCAGTGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVCSDSS*ISVSRE
Trigger: CTCCCTGGACACTGATATCCAGGAGCTGTCAGAGCA...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCTGCTCTGACAGCTCCTaGATATCAGTGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EAVFCLACNGVKSGAGKPCSDSS*ISVSRE
Trigger: CTCCCTGGACACTGATATCCAGGAGCTGTCAGAGCA...GGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGACTCCTCTGGGTCTGGGGATTaGCAGGGAAGGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PRVGPESMHVSSSVTTDSSGSGD*QGRALA
Trigger: GGCCAAGGCCCTTCCCTGCCAATCCCCAGACCCAGA...GGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCACGGCGGATCTTTCTTaGTCCCCACAGAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLTADLS*SPQRLD
Trigger: GTCCAGTCTCTGTGGGGACCAAGAAAGATCCGCCGT...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGCGAGGGTTCTGGTGGTaGCGTGAGCGCTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKRGFWW*RERLAL
Trigger: CAAAGCCAAGCGCTCACGCCACCACCAGAACCCTCG...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTTCAGCCCGAGGGTTCTaGTGGTGGCGTGAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLSARGF*WWRERL
Trigger: CAAGCGCTCACGCCACCACCAGAACCCTCGGGCTGA...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCATAGCTGGATGGGGTTaGGAACAGATAGTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFIAGWG*EQIVRE
Trigger: CTCCCTAACTATCTGTTCCCAACCCCATCCAGCTAT...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGCAGAGGTCATGTCCCTaGAGGGCACCTGGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGQRSCP*RAPGRS
Trigger: TGACCTACCAGGTGCCCTCCAGGGACATGACCTCTG...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGCTGAGTTCTGAGAATTaGGACATAGGAGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQLSSEN*DIGEES
Trigger: GCTTTCTTCTCCTATGTCCCAATTCTCAGAACTCAG...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCGAGGTGACACTCCTCTaGGCTGGGCTGCGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVEVTLL*AGLRSS
Trigger: AGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTC...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTATTCCTCTCCAAAGGTaGGAGGTGACACTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSIPLQR*EVTLLW
Trigger: CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAAT...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp CTTGAAGCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCAACCAGCCTGGGTCCCTaGAGCAGAAACACCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LEAQTPPRVGPESMHVSSTSLGP*SRNTSL
Trigger: AAGGGAGGTGTTTCTGCTCCAGGGACCCAGGCTGGT...TGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGCTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTGCTTGGCTGAGGGAGTaGGGTGGAAGATCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRIAWLRE*GGRSKS
Trigger: AGACTTAGATCTTCCACCTCACTCCCTCAGCCAAGC...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGGTGTGTACTCAGACGTaGTGTGCTCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGVCTQT*CAPAPP
Trigger: TGGAGGAGCTGGAGCACATCACGTCTGAGTACACAC...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGTGTGTACTCAGACGTaGTGTGCTCCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VFCLACNGVKSGAGKPSPVCTQT*CAPAPP
Trigger: TGGAGGAGCTGGAGCACATCACGTCTGAGTACACAC...AGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp TGTCTCCCCGCAATAAATAAGTGCAGCCCCAACCCTCAAGAGTCAGATTCAGGCAGCTCTCCAGGTACCTaGGGATGCTGTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: CLPAINKCSPNPQESDSGSSPGT*GCCPGS
Trigger: ACTGCCTGGACAGCATCCTCAGGTACCTGGAGAGCT...GCCTGAATCTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCCCTGGTAGGTCATCATaGCGCGCTGGTCAGCATTGG +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVPGRSS*RAGQHW
Trigger: CCAATGCTGACCAGCGCGTCATGATGACCTACCAGG...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGATGGAGGAAGCAGGGTaGGTCCATGGACACATGGAC +
Preference number: 4 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGMEEAG*VHGHMD
Trigger: GTCCATGTGTCCATGGACTCACCCTGCTTCCTCCAT...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GTCGATGCTGCCAAAGTATTTGCTTGTGTGGCTGCTCTGGCTGCTGCGAGTGATGCGCCTCTAGACTCATaGCCGTTGGACTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: VDAAKVFACVAALAAASDAPLDS*PLDSLP
Trigger: TGGCAATGAGTCCAACGGGCATGAGTCTAGAGGCGC...ATCACTCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCATCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGGGCTGACTGTTCACTaGTGCAGCCACTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLGLTVH*CSHWWT
Trigger: CGTCCACCAGTGGCTGCAGCAGTGAACAGTCAGCCC...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGCTTGAGCTCTCGAAGTaGTGTCATGAGTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWLELSK*CHEFLL
Trigger: CAGAAGGAACTCATGACAGCACTTCGAGAGCTCAAG...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp GCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTGCGTCTTGAGCTCTCGAAGTaGTGTCATGAGTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ASPLAAEVRAGHWSRKVRLELSK*CHEFLL
Trigger: CAGAAGGAACTCATGACAGCACTTCGAGAGCTCAAG...ACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp GGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCTGCTGTTACTCAGACGTGATGTaGTCCAGCTCCTCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GLLEMVPEWSLAGAVSCCYSDVM*SSSSRV
Trigger: TACCCTGGAGGAGCTGGAGCACATCACGTCTGAGTA...ACAGCAGGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGCGTAACCCGAATGGATaGGCTCTGCAATCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGRNPNG*ALQSAG
Trigger: GCCTGCTGATTGCAGAGCGCATCCATTCGGGTTACG...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGAGGCAGCTGGGTGTGTaGCGCGTAGTGAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGRQLGV*RVVKIL
Trigger: GAGGATTTTCACTACGCGGCACACACCCAGCTGCCT...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGGTCGGTCCTCAGGATaGAGGAACAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLGRSSG*RNRSTG
Trigger: CCCAGTGCTCCTGTTCCTGCATCCTGAGGACCGACC...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGACACGAAGGCTACCTTaGGGCTCCAGGGGTGCACAA +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKTRRLP*GSRGAQ
Trigger: TTGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGT...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCTGGTGCTTCACCAGATaGACATCCTTACAGATCTGC +
Preference number: 4 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCWCFTR*TSLQIC
Trigger: GCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCA...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR GCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGACTGGACCTGTCCTCTaGCTGTCGTCGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKTGPVL*LSSSEA
Trigger: AGCCTCTGACGACGACAGGCAGAGGACAGGTCCAGT...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GTGACCAGGATCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGTGCTGCCAAAGTATTTaGTTGTGTGGCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VTRILGAAPTVHTGHHIKCCQSI*LCGCSG
Trigger: GCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCA...CTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCGAAAACCGAGGCTGCTaGTTCTGCATGGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVENRGC*FCMARS
Trigger: GCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTC...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGGACTGGATGAGCTCCTaGCTTCTTCCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGDWMSS*LLPPPP
Trigger: TGGAGGAGGAGGAAGAAGGCAGGAGCTCATCCAGTC...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCCGGAGTTCTGCTCTCTaGTCCCTAAGAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVRSSAL*SLRGQR
Trigger: CCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCG...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGCCTAGGCATTCCTCCTaGCCATCGAGGCCGTATTCT +
Preference number: 4 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGPRHSS*PSRPYS
Trigger: AGAATACGGCCTCGATGGGCAGGAGGAATGCCTAGG...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGAACTCCTGTGGGCACTaGCAGCCTAGGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELNSCGH*QPRHSS
Trigger: GGAGGAATGCCTAGGCTGGCAGTGCCCACAGGAGTT...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCACTGCTGGGTGGGGATaGGCTCTGAGAGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SHGLLEMVPEWSLAGAVSTAGWG*ALRVCA
Trigger: AGCACAAACTCTCAGAGCCCATCCCCACCCAGCAGT...GGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGCAATGGAACTGCTaGGTGGGGATGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTRQWNC*VGMGSE
Trigger: CTCAGAGCCCATCCCCACCCAGCAGTTCCATTGCCT...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAACCTCCAGGGTATAGGTaGACATGTCCATGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: GIPPAHRGRILPSLQWSEPPGYR*TCPWSK
Trigger: CTTGCTCCATGGACATGTCCACCTATACCCTGGAGG...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCCAGGGTATAGGTaGACATGTCCATGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRIPPGYR*TCPWSK
Trigger: CTTGCTCCATGGACATGTCCACCTATACCCTGGAGG...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTGGTGCAGTTTCCTGCTGTAGGTAAGGCTGGACTGGATGAGCTCCTGCCTTCTCCTCCAGGGTATAGGTaGACATGTCCATGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LVQFPAVGKAGLDELLPSPPGYR*TCPWSK
Trigger: CTTGCTCCATGGACATGTCCACCTATACCCTGGAGG...AGAAGGCAGGAGCTCATCCAGTCCAGCCTTACCTACAGCAGGAAACTGCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAAAGACGGACTTCTCCTaGGTAAAGTCCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GIPPAHRGRILPSLQWSEKTDFS*VKSLRP
Trigger: AGGCCTCAGGGACTTTACCCAGGAGAAGTCCGTCTT...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGCTTTCATCCACATCCTaGAAGAGGCAGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LLRKEQGQGEVTRGVELGLSSTS*KRQLGV
Trigger: CACACCCAGCTGCCTCTTCCAGGATGTGGATGAAAG...CCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCTTTCATCCACATCCTaGAAGAGGCAGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GEATSAACQQLCPGEGRILSSTS*KRQLGV
Trigger: CACACCCAGCTGCCTCTTCCAGGATGTGGATGAAAG...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGTGCAGAATCTTCTTGTaGATAGCCAGCATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLCRIFL*IASMRG
Trigger: ACCCCTCATGCTGGCTATCCACAAGAAGATTCTGCA...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGAGTGGTCAAAGGGCTaGCCCGCCAACTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKEWSKG*PANCRI
Trigger: GATTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTC...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGTCGAGGAGAGAACACTaGGAGAGGGTAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKSRREH*ERVGLD
Trigger: GTCCAGCCCTACCCTCTCCCAGTGTTCTCTCCTCGA...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGATAAGGATAGCTGGATaGGGTTGGGAACAGATAGTT +
Preference number: 4 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQIRIAG*GWEQIV
Trigger: AACTATCTGTTCCCAACCCCATCCAGCTATCCTTAT...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTGAGTTCTGAGAATTaGGACATAGGAGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LRKPRLLLLHGSEPLPILLSSEN*DIGEES
Trigger: GCTTTCTTCTCCTATGTCCCAATTCTCAGAACTCAG...CAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAATCCAGTCCTAGACTaGGCAGAGGGCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTNPVLD*AEGRLQ
Trigger: CTGGAGCCTGCCCTCTGCCCAGTCTAGGACTGGATT...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTCTGCCTAGCTTGCAATaGAGTGAAGAGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VFCLACNGVKSGAGKPSPLPSLQ*SEEWGW
Trigger: CCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAG...AGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGATGGACAGATGGCTCTaGTCCGCCAAACTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGMDRWL*SAKLLW
Trigger: CCACAGGAGTTTGGCGGACCAGAGCCATCTGTCCAT...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTCTGTGTGAGCTCCGCTaGGATGCGCCTCTAGACTCA +
Preference number: 4 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLLCELR*DAPLDS
Trigger: TGAGTCTAGAGGCGCATCTCAGCGGAGCTCACACAG...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCCTCGAAGTGCTGTCATaGGTTCCTTCTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: ESLSWTPGDGPRMESSWCLEVLS*VPSESL
Trigger: CAAGGACTCAGAAGGAACTCATGACAGCACTTCGAG...GCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGCGGCAGTCGAAGCTTaGGCTCTCGAAGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLAAVEA*ALEVLS
Trigger: TGACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGC...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCGAGAGTTTGTGCTCTTaGTGCTCTCAGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLESLCS*CSQWSP
Trigger: TGGAGACCACTGAGAGCAGCAAGAGCACAAACTCTC...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGTGTAGGCAATGGAACTaGTGGGTGGGGATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTCRQWN*WVGMGS
Trigger: AGAGCCCATCCCCACCCAGCAGTTCCATTGCCTACA...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGCTTGAGCTCTCGAAGTaGTGTCATGAGTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLPIEAVFCLACNGVKSGLELSK*CHEFLL
Trigger: CAGAAGGAACTCATGACAGCACTTCGAGAGCTCAAG...CCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGACTCCACGCAGCAGGACGGCTaGCTGCTCCGAAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: PRVGPESMHVSSSVTTDSTQQDG*LLRNVD
Trigger: GTCTACATTTCGGAGCAGGCAGCCGTCCTGCTGCGT...GGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCACGTAACCCGAATGGATaGGCTCTGCAATCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSRNPNG*ALQSAG
Trigger: GCCTGCTGATTGCAGAGCGCATCCATTCGGGTTACG...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGGCAGCTGGGTGTGTaGCGCGTAGTGAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVRQLGV*RVVKIL
Trigger: GAGGATTTTCACTACGCGGCACACACCCAGCTGCCT...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGTCTTCCTTCTGTGTGTaGAGGGACAGCACGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRSSFCV*RDSTAL
Trigger: CAAGGCCGTGCTGTCCCTGCACACACAGAAGGAAGA...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCATCTTCCTTCTGTGTGTaGAGGGACAGCACGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSSSFCV*RDSTAL
Trigger: CAAGGCCGTGCTGTCCCTGCACACACAGAAGGAAGA...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAAGCAGGGGTCTGGAGTaGCCCATAAGGATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSSRGLE*PIRIAG
Trigger: TCCAGCTATCCTTATGGGGCACTCCAGACCCCTGCT...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCTGCTGCCAAAGTATTTaGTTGTGTGGCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLCCQSI*LCGCSG
Trigger: GCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCA...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGACCAGGATCTTGGGTaGTGCTCCCACAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLDQDLG*CSHSPH
Trigger: GTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTC...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCGACTGGATGAGCTCCTaGCTTCTTCCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVDWMSS*LLPPPP
Trigger: TGGAGGAGGAGGAAGAAGGCAGGAGCTCATCCAGTC...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGCGGAAGATGGAGGCATaGTGGCAGATGGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRRKMEA*WQMEEA
Trigger: TGCTTCCTCCATCTGCCAGCATGCCTCCATCTTCCG...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAATTGAACCATTGCTGTTaGCATCGGTGTCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: GIPPAHRGRILPSLQWSELNHCC*HRCHRP
Trigger: TGGCCGATGACACCGATGCCAACAGCAATGGTTCAA...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGTCTTGCTGCTCTCAGTaGTCTCCAGCAGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKSCCSQ*SPAGLS
Trigger: ACTCAGCCCTGCTGGAGACCACTGAGAGCAGCAAGA...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGGCGAGATGGAGCAGTaGAACCATAGAAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: VFCLACNGVKSGAGKPSPGEMEQ*NHRRLP
Trigger: TGGGAGTCTTCTATGGTTCCACTGCTCCATCTCGCC...AGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGTGCAGAATCTTCTTGTaGATAGCCAGCATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LLPIEAVFCLACNGVKSGCRIFL*IASMRG
Trigger: ACCCCTCATGCTGGCTATCCACAAGAAGATTCTGCA...CCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGACTCCGAGTGGTCAAAGGGCTaGCCCGCCAACTGCAGAATC +
Preference number: 4 (lower is better)
Translates to: PRVGPESMHVSSSVTTDSEWSKG*PANCRI
Trigger: GATTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTC...GGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAAAAAGCTGCTGGCCCTaGTGCTTCACCAGATGCACA +
Preference number: 4 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGKSCWP*CFTRCT
Trigger: TGTGCATCTGGTGAAGCACCAGGGCCAGCAGCTTTT...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGACGGCGGATCTTTCTTaGTCCCCACAGAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKTADLS*SPQRLD
Trigger: GTCCAGTCTCTGTGGGGACCAAGAAAGATCCGCCGT...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCAAGTATTTGCTTGTGTaGCTGCTCTGGCTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLKYLLV*LLWLLR
Trigger: TCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTT...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GAAGAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGCCTCTCATGGACTCCTaGAGATGGTCCCAGAATGGA +
Preference number: 4 (lower is better)
Translates to: EESLSWTPGDGPRMESSWPLMDS*RWSQNG
Trigger: TCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGG...CCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTCTGAGTTCTGAGAATTaGGACATAGGAGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWALSSEN*DIGEES
Trigger: GCTTTCTTCTCCTATGTCCCAATTCTCAGAACTCAG...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CCA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGAGTCCATGGACACATaGACAGATGGCTCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELESMDT*TDGSGP
Trigger: CGGACCAGAGCCATCTGTCCATGTGTCCATGGACTC...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCTTGGCTGAGGGAGTaGGGTGGAAGATCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSAWLRE*GGRSKS
Trigger: AGACTTAGATCTTCCACCTCACTCCCTCAGCCAAGC...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATGGTCTAGCCACATCTaGGTTCTGAGAATTGGGACA +
Preference number: 4 (lower is better)
Translates to: MERPLQQLVSNFVQGREGWSSHI*VLRIGT
Trigger: TGTCCCAATTCTCAGAACTCAGATGTGGCTAGACCA...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCATGTCTCTTCATCAGTaGCAACTGACTCCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: EAVFCLACNGVKSGAGKPMSLHQ*QLTPKW
Trigger: CCACTTAGGAGTCAGTTGTCACTGATGAAGAGACAT...GGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp TCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTTTCCGCCCGTTGGACTCATTaGCACTTGAACCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: SHGLLEMVPEWSLAGAVSARWTH*HLNHCC
Trigger: ACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGC...GGAAACTGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR GCA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGGAGAGTTTGTGCTCTTaGTGCTCTCAGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGESLCS*CSQWSP
Trigger: TGGAGACCACTGAGAGCAGCAAGAGCACAAACTCTC...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGACTCAATAAAAAGCTaGTGGCCCTGGTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGDSIKS*WPWCFT
Trigger: GGTGAAGCACCAGGGCCAGCAGCTTTTTATTGAGTC...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCCTCGGAAGAGTCGATaGTGCCAAAGTATTTGCTTG +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLPRKSR*CQSICL
Trigger: CAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGG...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR GCA 90 bp CTTGAAGCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCAATCGAGGCCGTATTCTaGCTAGCTTGCAATGGAGTG +
Preference number: 4 (lower is better)
Translates to: LEAQTPPRVGPESMHVSSIEAVF*LACNGV
Trigger: CACTCCATTGCAAGCTAGGCAGAATACGGCCTCGAT...TGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGCTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGTTGAACCATTGCTGTTaGCATCGGTGTCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGLNHCC*HRCHRP
Trigger: TGGCCGATGACACCGATGCCAACAGCAATGGTTCAA...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGAAGACGGACTTCTCCTaGGTAAAGTCCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKKTDFS*VKSLRP
Trigger: AGGCCTCAGGGACTTTACCCAGGAGAAGTCCGTCTT...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGAAGACGGACTTCTCCTaGGTAAAGTCCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRKTDFS*VKSLRP
Trigger: AGGCCTCAGGGACTTTACCCAGGAGAAGTCCGTCTT...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCCTTTCATCCACATCCTaGAAGAGGCAGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVLSSTS*KRQLGV
Trigger: CACACCCAGCTGCCTCTTCCAGGATGTGGATGAAAG...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCCAGCCTCAGCCTCGGAAGAGTCGATGCTGCCAAAGTATTTGCTTGTGTGGCTTGCAGAATCTTCTTGTaGATAGCCAGCATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PSLSLGRVDAAKVFACVACRIFL*IASMRG
Trigger: ACCCCTCATGCTGGCTATCCACAAGAAGATTCTGCA...AGCCACACAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGGCTGAGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCTGCAGCAGATTGAGCTaGAGTGGAGAGCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVCSRLS*SGELHL
Trigger: GAGATGCAGCTCTCCACTCCAGCTCAATCTGCTGCA...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TGTCTCCCCGCAATAAATAAGTGCAGCCCCAACCCTCAAGAGTCAGATTCAGGCTGCAGCAGATTGAGCTaGAGTGGAGAGCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: CLPAINKCSPNPQESDSGCSRLS*SGELHL
Trigger: GAGATGCAGCTCTCCACTCCAGCTCAATCTGCTGCA...GCCTGAATCTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGCCTCTCATGGACTCCTaGAGATGGTCCCAGAATGGA +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKPLMDS*RWSQNG
Trigger: TCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGG...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGCAACTGACTCCTAAGTaGGCATACTTCCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELQLTPK*AYFLPL
Trigger: CAGGGGCAGGAAGTATGCCCACTTAGGAGTCAGTTG...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGGACCCCACCCAGAGTTaGCCCAGAATCTATGCATGT +
Preference number: 4 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTDPTQS*PRIYAC
Trigger: ACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTC...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGACTCCATGGACAGATGGCTCTaGTCCGCCAAACTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PRVGPESMHVSSSVTTDSMDRWL*SAKLLW
Trigger: CCACAGGAGTTTGGCGGACCAGAGCCATCTGTCCAT...GGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGCAGGGTGAGTCCATaGACACATGGACAGATGGCT +
Preference number: 4 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTSRVSP*THGQMA
Trigger: AGCCATCTGTCCATGTGTCCATGGACTCACCCTGCT...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGCTTCTAGCATTACACTaGCTCCTCCAAACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRLLALH*LLQTRP
Trigger: TGGGCGGGTTTGGAGGAGCCAGTGTAATGCTAGAAG...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp GCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTGAAGATCTAAGTCTCTaGGGGTTGAGAAGTTCGATC +
Preference number: 4 (lower is better)
Translates to: AVFCLACNGVKSGAGKPSEDLSL*GLRSSI
Trigger: GATCGAACTTCTCAACCCTCAGAGACTTAGATCTTC...ACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR TCA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGAAGGTATCCTGGTTCTaGAGTGTGTACTCAGACGTG +
Preference number: 4 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGKVSWF*SVYSDV
Trigger: CACGTCTGAGTACACACTTCAGAACCAGGATACCTT...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR TCA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGATGGTCTAGCCACATCTaGGTTCTGAGAATTGGGACA +
Preference number: 4 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGWSSHI*VLRIGT
Trigger: TGTCCCAATTCTCAGAACTCAGATGTGGCTAGACCA...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GTCGATGCTGCCAAAGTATTTGCTTGTGTGGCTGCTCTGGCTGCTGCGAGTGATTGGTCTAGCCACATCTaGGTTCTGAGAATTGGGACA +
Preference number: 4 (lower is better)
Translates to: VDAAKVFACVAALAAASDWSSHI*VLRIGT
Trigger: TGTCCCAATTCTCAGAACTCAGATGTGGCTAGACCA...ATCACTCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCATCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGTTCATCAGTGACAACTaGCTCCTAAGTGGGCATACT +
Preference number: 4 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVFISDN*LLSGHT
Trigger: AGTATGCCCACTTAGGAGTCAGTTGTCACTGATGAA...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGCCCGTTGGACTCATTaGCACTTGAACCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELARWTH*HLNHCC
Trigger: ACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGC...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGCCCGTTGGACTCATTaGCACTTGAACCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKARWTH*HLNHCC
Trigger: ACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGC...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGGAGAGTTTGTGCTCTTaGTGCTCTCAGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTESLCS*CSQWSP
Trigger: TGGAGACCACTGAGAGCAGCAAGAGCACAAACTCTC...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCCCCGCAATAAATAAGTaGAGCCCCAACCCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVPAINK*SPNPQE
Trigger: CTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGG...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR GCA 90 bp CCAGGCAGGTCCTCCATCATGATGATGTCTTTCTTGGTCCCCACAGAGACTGGAGTATTCTGCCTAGCTTaGAATGGAGTGAAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PGRSSIMMMSFLVPTETGVFCLA*NGVKSG
Trigger: CCCACTCTTCACTCCATTGCAAGCTAGGCAGAATAC...TCCAGTCTCTGTGGGGACCAAGAAAGACATCATCATGATGGAGGACCTGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CCA 90 bp ACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTAATGGAACTGCTGGGTaGGGATGGGCTCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: TPPRVGPESMHVSSSVTTNGTAG*GWALRV
Trigger: AACTCTCAGAGCCCATCCCCACCCAGCAGTTCCATT...AGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CCA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTTGCTCTGACAGCTCCTaGATATCAGTGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLCSDSS*ISVSRE
Trigger: CTCCCTGGACACTGATATCCAGGAGCTGTCAGAGCA...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGCAGATTGAGCTGGAGTaGAGAGCTGCATCTCGAGTT +
Preference number: 4 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKQIELE*RAASRV
Trigger: AACTCGAGATGCAGCTCTCCACTCCAGCTCAATCTG...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GAAGAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGGAAGATCTAAGTCTCTaGGGGTTGAGAAGTTCGATC +
Preference number: 4 (lower is better)
Translates to: EESLSWTPGDGPRMESSWEDLSL*GLRSSI
Trigger: GATCGAACTTCTCAACCCTCAGAGACTTAGATCTTC...CCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR TCA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTCTCGAAGTGCTGTCATaGGTTCCTTCTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLLEVLS*VPSESL
Trigger: CAAGGACTCAGAAGGAACTCATGACAGCACTTCGAG...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGACAAGGGGATTTATTaGGAAAGGAACAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTRGFIEKGTRPGRGYTRDKGIY*ERNKAR
Trigger: CCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTC...CCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGACTCCGCCCGTTGGACTCATTaGCACTTGAACCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: PRVGPESMHVSSSVTTDSARWTH*HLNHCC
Trigger: ACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGC...GGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGCTTGAGCTCTCGAAGTaGTGTCATGAGTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTLELSK*CHEFLL
Trigger: CAGAAGGAACTCATGACAGCACTTCGAGAGCTCAAG...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCTGGTGCTTCACCAGATaGACATCCTTACAGATCTGC +
Preference number: 4 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVWCFTR*TSLQIC
Trigger: GCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCA...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp TGTCTCCCCGCAATAAATAAGTGCAGCCCCAACCCTCAAGAGTCAGATTCAGGCTGCAGAATCTTCTTGTaGATAGCCAGCATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: CLPAINKCSPNPQESDSGCRIFL*IASMRG
Trigger: ACCCCTCATGCTGGCTATCCACAAGAAGATTCTGCA...GCCTGAATCTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCATAAGGATAGCTGGATaGGGTTGGGAACAGATAGTT +
Preference number: 4 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLIRIAG*GWEQIV
Trigger: AACTATCTGTTCCCAACCCCATCCAGCTATCCTTAT...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR TCA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGATGTCTCTTCATCAGTaGCAACTGACTCCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELMSLHQ*QLTPKW
Trigger: CCACTTAGGAGTCAGTTGTCACTGATGAAGAGACAT...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR GCA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCACGGAAGAGTCGATGCTaGCAAAGTATTTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSRKSRC*QSICLC
Trigger: ACACAAGCAAATACTTTGGCAGCATCGACTCTTCCG...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CCA 90 bp CCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGACTCCTCAATAAAAAGCTGCTaGCCCTGGTGCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: PRVGPESMHVSSSVTTDSSIKSC*PWCFTR
Trigger: TCTGGTGAAGCACCAGGGCCAGCAGCTTTTTATTGA...GGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS GCA 90 bp CCTGGGCAAGGCCGGTGCTGGTCGCAGGAGTGTCCTCCGCACGCCTaGCCGCCGCCGCTCCAGCCCGCAGCCGAGTGGAAGCTCCACCGG +
Preference number: 5 (lower is better)
Translates to: PGQGRCWSQECPPHA*PPPLQPAAEWKLHR
Trigger: CCGGTGGAGCTTCCACTCGGCTGCGGGCTGGAGCGGCGGCGGGCAGGCGTGCGGAGGACACTCCTGCGACCAGCACCGGCCTTGCCCAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581703.1
CDS-3UTR CAA 90 bp CGGCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGAGCCTTGGCCCCGCCTaGGGCCTCCTCGCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: RQRVQLRTPGSHLRGSTRSLGPA*GLLAAL
Trigger: GAGGGCTGCGAGGAGGCCCAAGGCGGGGCCAAGGCT...CCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS CCA 90 bp CGGGGCCGTGGTGGCAGCCTCGCTCGCCAAGGGCTGAGGGAGCTGTaGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: RGRGGSLARQGLREL*KSCRVHAACPGLGS
Trigger: GCTTCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGAGGCTGCCACCACGGCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
CDS CCA 90 bp GCGCTTCAGCCCGAGGGTTCTGGTGGTGGCGTGAGCGCTTGGCTTTaGATCGGCAGTGGTGTCGGCGGCTTGGGGGTGCGGGGCCGTGGT +
Preference number: 5 (lower is better)
Translates to: ALQPEGSGGGVSAWL*IGSGVGGLGVRGRG
Trigger: ACCACGGCCCCGCACCCCCAAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGCTCACGCCACCACCAGAACCCTCGGGCTGAAGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
ENST00000581082.5
CDS CCA 90 bp AGCAGGGCGCTTCAGCCCGAGGGTTCTGGTGGTGGCGTGAGCGCTTaGCTTTGGATCGGCAGTGGTGTCGGCGGCTTGGGGGTGCGGGGC +
Preference number: 5 (lower is better)
Translates to: SRALQPEGSGGGVSA*LWIGSGVGGLGVRG
Trigger: GCCCCGCACCCCCAAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGCTCACGCCACCACCAGAACCCTCGGGCTGAAGCGCCCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
ENST00000581082.5
CDS CCA 90 bp AGAGTCCGGGCGGTGAGGAGGACTCGGGGCGAGGGCGGGCAAGGATaGAGAAGGGGAGTGCGAGGCAGGAGTGGGAGGCCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RVRAVRRTRGEGGQG*RRGVRGRSGRPFSR
Trigger: CCTGCTGAAGGGCCTCCCACTCCTGCCTCGCACTCCCCTTCTCCATCCTTGCCCGCCCTCGCCCCGAGTCCTCCTCACCGCCCGGACTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS CCA 90 bp TGCCACTTGAACCATTGCTGTTGGCATCGGTGTCATCGGCCAGGCTaGGGCCTGGGCAAGGCCGGTGCGCTCGGCGCGCACGCACACTCC +
Preference number: 5 (lower is better)
Translates to: CHLNHCCWHRCHRPG*GLGKAGALGAHAHS
Trigger: GGAGTGTGCGTGCGCGCCGAGCGCACCGGCCTTGCCCAGGCCCCAGCCTGGCCGATGACACCGATGCCAACAGCAATGGTTCAAGTGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR CAA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTAGTGGTGTCGGCGGCTaGGGGGTGCGGGGCCGTGGT +
Preference number: 5 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSASGVGG*GVRGRG
Trigger: ACCACGGCCCCGCACCCCCAAGCCGCCGACACCACT...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGCCTTGGCCCCGCCTaGGGCCTCCTCGCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKSLGPA*GLLAAL
Trigger: GAGGGCTGCGAGGAGGCCCAAGGCGGGGCCAAGGCT...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS CCA 90 bp TGCCACTTGAACCATTGCTGTTGGCATCGGTGTCATCGGCCAGGCTaGGGCCTGGGCAAGGCCGGTGCTGTGGGGGCCCAGGGGATGGGA +
Preference number: 5 (lower is better)
Translates to: CHLNHCCWHRCHRPG*GLGKAGAVGAQGMG
Trigger: TCCCATCCCCTGGGCCCCCACAGCACCGGCCTTGCCCAGGCCCCAGCCTGGCCGATGACACCGATGCCAACAGCAATGGTTCAAGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317276.9
ENST00000577253.5
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
ENST00000584202.1
CDS CCA 90 bp GGACTCAGTGACCTCCGCCTCGCTCGCCAAGGGCTGAGGGAGCTGTaGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: GLSDLRLARQGLREL*KSCRVHAACPGLGS
Trigger: GCTTCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGAGGCGGAGGTCACTGAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp GGCCCCAGGTGGCTACCTCGCTCGCCAAGGGCTGAGGGAGCTGTGGAAGAGCTGGTGGTGCTGGGGAGGTaGCAGCTCTCCAGGTACCTG +
Preference number: 5 (lower is better)
Translates to: GPRWLPRSPRAEGAVEELVVLGR*QLSRYL
Trigger: CAGGTACCTGGAGAGCTGCAACCTCCCCAGCACCAC...CAGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGAGGTAGCCACCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CAA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGAACACTCTCCGCCTTATaGGCCAGGGCGAGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERTLSAL*ARASGL
Trigger: GAGCCCGCTCGCCCTGGCCAATAAGGCGGAGAGTGT...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCGCACCAAGGCCACCATaGGGGTCACCAAAGGGGCGG +
Preference number: 5 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLAPRPP*GSPKGR
Trigger: CCGCCCCTTTGGTGACCCCAATGGTGGCCTTGGTGC...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS CCA 90 bp TGCCACTTGAACCATTGCTGTTGGCATCGGTGTCATCGGCCAGGCTaGGGCCTGGGCAAGGCCGGTGCTGGTCGCAGGAGTGTCCTCCGC +
Preference number: 5 (lower is better)
Translates to: CHLNHCCWHRCHRPG*GLGKAGAGRRSVLR
Trigger: GCGGAGGACACTCCTGCGACCAGCACCGGCCTTGCCCAGGCCCCAGCCTGGCCGATGACACCGATGCCAACAGCAATGGTTCAAGTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581703.1
CDS-3UTR CAA 90 bp GCCCAAGCCAGAGCCCAAGGAGCCCGAGGCTGCGGAGCCTGTGCCGGAGCGCGAATGGGCTCTGAGAGTTaGTGCTCTTGCTGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: AQARAQGARGCGACAGARMGSES*CSCCSQ
Trigger: CTGAGAGCAGCAAGAGCACAAACTCTCAGAGCCCAT...TCGCGCTCCGGCACAGGCTCCGCAGCCTCGGGCTCCTTGGGCTCTGGCTTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp GCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGCCCACTGGTGGACGGGTaGTCCTGCTCTGAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: APAPRLGLKSLTWRQHLCPLVDG*SCSELA
Trigger: TGCCAGCTCAGAGCAGGACAACCCGTCCACCAGTGG...GCAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGCGGAACACGTCCCGCTaGCAACGCAGCAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: CPCPQARPEVAYLETAPLRNTSR*QRSRTA
Trigger: AGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCG...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCACCCCCGGGTCCTGCTaGGGCCTCAGGCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFTPGSC*GLRLSS
Trigger: GGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS TCA 90 bp AGTGGAGAGCTGCATCTCGAGTTGAACAGTGGAGAGTCCGGGCGGTaGGGAGGACTCGGGGCGAGGGCGGGCAAGGATGGAGAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: SGELHLELNSGESGR*GGLGARAGKDGEGE
Trigger: CTCCCCTTCTCCATCCTTGCCCGCCCTCGCCCCGAGTCCTCCTCACCGCCCGGACTCTCCACTGTTCAACTCGAGATGCAGCTCTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS GCA 90 bp GCGGGTACCCCGGAACACGTCCCGCTTGCAACGCAGCAGGACGGCTaGCTGCTCCGAAATGTAGACGATTCGGCCCGTCAGGAAGGAGAC +
Preference number: 5 (lower is better)
Translates to: AGTPEHVPLATQQDG*LLRNVDDSARQEGD
Trigger: GTCTCCTTCCTGACGGGCCGAATCGTCTACATTTCGGAGCAGGCAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCGGGGTACCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000579065.1
ENST00000581395.5
ENST00000582719.5
CDS-3UTR CAA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCGGAACACGTCCCGCTaGCAACGCAGCAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRRNTSR*QRSRTA
Trigger: AGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCG...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCGGGGCCGTGCGTACTTaGTGGCGGCCCAACACGAAG +
Preference number: 5 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCGAVRT*WRPNTK
Trigger: CTTCGTGTTGGGCCGCCACAAAGTACGCACGGCCCC...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp CTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGGGGGCCGTGCGTACTTaGTGGCGGCCCAACACGAAG +
Preference number: 5 (lower is better)
Translates to: LRKPRLLLLHGSEPLPILGAVRT*WRPNTK
Trigger: CTTCGTGTTGGGCCGCCACAAAGTACGCACGGCCCC...CAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp CGGAAGCGGCTGAGGAAGGCTTGCTCTTCCTTCTGTGTGTGCAGGGACAGCACGAGGGACAGCACGGCCTaGGTCAGCCCCACTGGACGG +
Preference number: 5 (lower is better)
Translates to: RKRLRKACSSFCVCRDSTRDSTA*VSPTGR
Trigger: CCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCCT...CGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CAA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTAGGGACAGCACGGCCTaGGTCAGCCCCACTGGACGG +
Preference number: 5 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWARDSTA*VSPTGR
Trigger: CCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCCT...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAAGAGCCCGAGGCAGTaGGCCCTTCCGGACCCAGGA +
Preference number: 5 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQKSPRQ*ALPDPG
Trigger: TCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTT...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCCCGCACAGCCTCCATaGGCACCTCCGGCCGCCATC +
Preference number: 5 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCPAQPP*APPAAI
Trigger: GATGGCGGCCGGAGGTGCCAATGGAGGCTGTGCGGG...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS TCA 90 bp GCAGTGCTGGTTCCAAGAAGGAGAGGGGAAAGGGCGATTAGAGGGTaGGGTAGGAGCAGGTCACTCACTGGCGCAGGAGGCCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: AVLVPRRRGERAIRG*GRSRSLTGAGGPGP
Trigger: GGGGCCTGGGCCTCCTGCGCCAGTGAGTGACCTGCTCCTACCTCACCCTCTAATCGCCCTTTCCCCTCTCCTTCTTGGAACCAGCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS TCA 90 bp CACCCACACATCATCATCAACTCACCAGGGAGGCGGGGCCGGGACTaGGGCCGGGCCCGAGACTCAATAAAAAGCTGCTGGCCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: HPHIIINSPGRRGRD*GRARDSIKSCWPWC
Trigger: GCACCAGGGCCAGCAGCTTTTTATTGAGTCTCGGGCCCGGCCTCAGTCCCGGCCCCGCCTCCCTGGTGAGTTGATGATGATGTGTGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577424.1
CDS GCA 90 bp ACAGATCTGCTGGAAAGTCACTGGCGCAGGAGGCCCAGGCCCCTCTaGATCACCCCCGTTGCTATCACTGGAGGACCCAGGGCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: TDLLESHWRRRPRPL*ITPVAITGGPRAVE
Trigger: CTCCACAGCCCTGGGTCCTCCAGTGATAGCAACGGGGGTGATGCAGAGGGGCCTGGGCCTCCTGCGCCAGTGACTTTCCAGCAGATCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000581082.5
ENST00000582719.5
CDS CCA 90 bp CAGCAGATTGAGCTGGAGTGGAGAGCTGCATCTCGAGTTGAACAGTaGAGAGTCCGGGCGGTGAGGAGGACTCGGGGCGAGGGCGGGCAA +
Preference number: 5 (lower is better)
Translates to: QQIELEWRAASRVEQ*RVRAVRRTRGEGGQ
Trigger: TTGCCCGCCCTCGCCCCGAGTCCTCCTCACCGCCCGGACTCTCCACTGTTCAACTCGAGATGCAGCTCTCCACTCCAGCTCAATCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGCCACTGGTGGACGGGTaGTCCTGCTCTGAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKPLVDG*SCSELA
Trigger: TGCCAGCTCAGAGCAGGACAACCCGTCCACCAGTGG...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAAACACGAAGGCTACCTaGCGGCTCCAGGGGTGCACA +
Preference number: 5 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEANTKAT*RLQGCT
Trigger: TGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGTT...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp CGGAAGCGGCTGAGGAAGGCTTGCTCTTCCTTCTGTGTGTGCAGGGACAGCACGGGGGCCGTGCGTACTTaGTGGCGGCCCAACACGAAG +
Preference number: 5 (lower is better)
Translates to: RKRLRKACSSFCVCRDSTGAVRT*WRPNTK
Trigger: CTTCGTGTTGGGCCGCCACAAAGTACGCACGGCCCC...CGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CAA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGGTGGTGCTGGGGAGGTaGCAGCTCTCCAGGTACCTG +
Preference number: 5 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRVVLGR*QLSRYL
Trigger: CAGGTACCTGGAGAGCTGCAACCTCCCCAGCACCAC...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCACACTCTCCGCCTTATaGGCCAGGGCGAGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFTLSAL*ARASGL
Trigger: GAGCCCGCTCGCCCTGGCCAATAAGGCGGAGAGTGT...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTAGTGGTGTCGGCGGCTaGGGGGTGCGGGGCCGTGGT +
Preference number: 5 (lower is better)
Translates to: GEATSAACQQLCPGEGRISGVGG*GVRGRG
Trigger: ACCACGGCCCCGCACCCCCAAGCCGCCGACACCACT...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGTGGTGGCGTGAGCGCTaGGCTTTGGATCGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRWWRER*ALDRQW
Trigger: CCACTGCCGATCCAAAGCCAAGCGCTCACGCCACCA...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGTGGTGGCGTGAGCGCTaGGCTTTGGATCGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQWWRER*ALDRQW
Trigger: CCACTGCCGATCCAAAGCCAAGCGCTCACGCCACCA...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGCCTTGGCCCCGCCTaGGGCCTCCTCGCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: ESLSWTPGDGPRMESSWCSLGPA*GLLAAL
Trigger: GAGGGCTGCGAGGAGGCCCAAGGCGGGGCCAAGGCT...GCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS TCA 90 bp AAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGAAGCGGCTaGGGAAGGCTTGCTCTTCCTTCCGACTCCGGGGGCTTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: KSCRVHAACPGLGSG*GRLALPSDSGGFLS
Trigger: AGACAAGAAGCCCCCGGAGTCGGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578089.1
CDS GCA 90 bp GAGCCAGGAGCTCAGAGAAGCGGGTACCCCGGAACACGTCCCGCTTaGAACGCAGCAGGACGGCTGCCTGCTCCGAAATGTAGACGATTC +
Preference number: 5 (lower is better)
Translates to: EPGAQRSGYPGTRPA*NAAGRLPAPKCRRF
Trigger: GAATCGTCTACATTTCGGAGCAGGCAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCGGGGTACCCGCTTCTCTGAGCTCCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000579065.1
ENST00000581395.5
ENST00000582719.5
CDS CCA 90 bp TCCCGGTCAGGACCTCCTCTGATACGGCAGAAGACGGACTTCTCCTaGGTAAAGTCCCTGAGGCCTGAACCTGCTGAGGCCCCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: SRSGPPLIRQKTDFS*VKSLRPEPAEAPVP
Trigger: GGGCACAGGGGCCTCAGCAGGTTCAGGCCTCAGGGACTTTACCCAGGAGAAGTCCGTCTTCTGCCGTATCAGAGGAGGTCCTGACCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
CDS CCA 90 bp TCCCCGTTGCGGGCACAGAAGCGGATAGGGGAGTGGTCAAAGGGCTaGCCCGCCAACTGCAGAACTGATGGAAGTGGGAAAGGAGGAGCG +
Preference number: 5 (lower is better)
Translates to: SPLRAQKRIGEWSKG*PANCRTDGSGKGGA
Trigger: CGCTCCTCCTTTCCCACTTCCATCAGTTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTTCTGTGCCCGCAACGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579203.1
CDS-3UTR CAA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGGGCGGCAGTCGAAGCTaGAGCTCTCGAAGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQGGSRS*SSRSAV
Trigger: GACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGCC...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp TCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCGGCGGCAGTCGAAGCTaGAGCTCTCGAAGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: SSENRGCCFCMARSRSRSGGSRS*SSRSAV
Trigger: GACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGCC...GGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp CTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCAGGTGACATACTCCCCGTaGCGGGCACAGAAGCGGATA +
Preference number: 5 (lower is better)
Translates to: LWAGLRSSALCSLRGQRQVTYSP*RAQKRI
Trigger: TATCCGCTTCTGTGCCCGCAACGGGGAGTATGTCAC...CTGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCACACTCTCCGCCTTATaGGCCAGGGCGAGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCTLSAL*ARASGL
Trigger: GAGCCCGCTCGCCCTGGCCAATAAGGCGGAGAGTGT...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR CAA 90 bp GCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTGCGTACACTCTCCGCCTTATaGGCCAGGGCGAGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: ASPLAAEVRAGHWSRKVRTLSAL*ARASGL
Trigger: GAGCCCGCTCGCCCTGGCCAATAAGGCGGAGAGTGT...ACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGGGAGCGCGAGTCCTCTaGCAGCAGAAGTTCGAGCAG +
Preference number: 5 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKGARVL*QQKFEQ
Trigger: CTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCC...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp ACAGGCCATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCCAGGAGTGGGAGCGCGAGTCCTCTaGCAGCAGAAGTTCGAGCAG +
Preference number: 5 (lower is better)
Translates to: TGHHIKSPRQLALPDPGVGARVL*QQKFEQ
Trigger: CTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCC...CACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp AACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGCACGCGCTGGTCAGCATaGGCCATGAGCAGCCAAATG +
Preference number: 5 (lower is better)
Translates to: NRGCCFCMARSRSRSCFSTRWSA*AMSSQM
Trigger: CATTTGGCTGCTCATGGCCAATGCTGACCAGCGCGT...GCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGAGGGTGACCAGGATCTaGGGTGCTGCTCCCACAGTC +
Preference number: 5 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRRVTRI*GAAPTV
Trigger: GACTGTGGGAGCAGCACCCAAGATCCTGGTCACCCT...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS GCA 90 bp AACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTaGTTCAGCACAGAGGTCATGTCCCTGCCCAAGAAGGGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: NRGCCFCMARSRSRS*FSTEVMSLPKKGFR
Trigger: TCTGAACCCCTTCTTGGGCAGGGACATGACCTCTGTGCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583677.1
CDS CCA 90 bp TCTGAGACCCGGATCTTGGTCACATACGGGGTTAGGCGGAATGGCTaGTACCGAGGCCCTGGATCCCGGTCAGGACCTCCTCTGATACGG +
Preference number: 5 (lower is better)
Translates to: SETRILVTYGVRRNG*YRGPGSRSGPPLIR
Trigger: CCGTATCAGAGGAGGTCCTGACCGGGATCCAGGGCCTCGGTACCAGCCATTCCGCCTAACCCCGTATGTGACCAAGATCCGGGTCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
CDS CCA 90 bp CAGAGGTCATGTCCCTGCCCAAGAAGGGGTTCAGAAGGCAGAGGCTaGGATCCAGGACCCGGACCAGGACCCATGAAGCTGGCATCCTTC +
Preference number: 5 (lower is better)
Translates to: QRSCPCPRRGSEGRG*DPGPGPGPMKLASF
Trigger: GAAGGATGCCAGCTTCATGGGTCCTGGTCCGGGTCCTGGATCCCAGCCTCTGCCTTCTGAACCCCTTCTTGGGCAGGGACATGACCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583677.1
CDS-3UTR CAA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGGTTCCTTCTGAGTCCTaGCCCGGGCTGACTGTTCAC +
Preference number: 5 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKVPSES*PGLTVH
Trigger: GTGAACAGTCAGCCCGGGCAAGGACTCAGAAGGAAC...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp CTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGCGGAACACGTCCCGCTaGCAACGCAGCAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: LLPIEAVFCLACNGVKSGRNTSR*QRSRTA
Trigger: AGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCG...CCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCAACACGAAGGCTACCTaGCGGCTCCAGGGGTGCACA +
Preference number: 5 (lower is better)
Translates to: DSSPKVGGDTPLGWAAEFNTKAT*RLQGCT
Trigger: TGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGTT...GAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTAACACGAAGGCTACCTaGCGGCTCCAGGGGTGCACA +
Preference number: 5 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWANTKAT*RLQGCT
Trigger: TGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGTT...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp ACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGGACGGCGGATCTTTCTaGGTCCCCACAGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: TLLWAGLRSSALCSLRGQDGGSF*VPTETG
Trigger: TCCAGTCTCTGTGGGGACCAAGAAAGATCCGCCGTC...CTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp GCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTAGGGACAGCACGGCCTaGGTCAGCCCCACTGGACGG +
Preference number: 5 (lower is better)
Translates to: AVFCLACNGVKSGAGKPSRDSTA*VSPTGR
Trigger: CCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCCT...ACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp AGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGGAAGCGGCTGAGGAAGGCTaGCTCTTCCTTCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: RNKARERLHEGSSWGCAEAAEEG*LFLLCV
Trigger: CACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGC...TTCCGCACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGCGTGAGCGCTTGGCTTaGGATCGGCAGTGGTGTCGG +
Preference number: 5 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWRERLA*DRQWCR
Trigger: CCGACACCACTGCCGATCCAAAGCCAAGCGCTCACG...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GGTCCGGCCCCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGAGCTGCATCTCGAGTaGAACAGTGGAGAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: GPAPYGGRSWGSFPLVGLELHLE*NSGESG
Trigger: CCCGGACTCTCCACTGTTCAACTCGAGATGCAGCTC...TAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGGGGCCGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGGAGCTGCATCTCGAGTaGAACAGTGGAGAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRELHLE*NSGESG
Trigger: CCCGGACTCTCCACTGTTCAACTCGAGATGCAGCTC...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GCAGAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGATGCCAAAGTATTTGCTaGTGTGGCTGCTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: AEGTAENAWVPPEGQHQGCQSIC*CGCSGC
Trigger: GCAGCCAGAGCAGCCACACAAGCAAATACTTTGGCA...TCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTAGGGTGACCAGGATCTaGGGTGCTGCTCCCACAGTC +
Preference number: 5 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWARVTRI*GAAPTV
Trigger: GACTGTGGGAGCAGCACCCAAGATCCTGGTCACCCT...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp CCCTCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGACCCCCGGGTCCTGCTaGGGCCTCAGGCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PSRVRFRLSWNMERPLQQTPGSC*GLRLSS
Trigger: GGAGGAGAGCCTGAGGCCCAAGCAGGACCCGGGGGT...CTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS TCA 90 bp CTTACAGATCTGCTGGAAAGTCACCTGTGGGACACAGCACCACAGTaGGCAGAACCAGGGGGTGTCGCCAGTGTCAGGGGCCAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: LTDLLESHLWDTAPQ*AEPGGVASVRGQGH
Trigger: GTGCCCTTGGCCCCTGACACTGGCGACACCCCCTGGTTCTGCTCACTGTGGTGCTGTGTCCCACAGGTGACTTTCCAGCAGATCTGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS GCA 90 bp GTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTaGGTCCTGATTGGAGGACTCAGTGACCTCCGCCAGTCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: VLLQQKFEQVTGAGK*VLIGGLSDLRQSGL
Trigger: GAGGCCAGACTGGCGGAGGTCACTGAGTCCTCCAATCAGGACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000579098.1
ENST00000581082.5
CDS GCA 90 bp GCACAGAAGCGGATAGGGGAGTGGTCAAAGGGCTGGCCCGCCAACTaGAGAACTGATGGAAGTGGGAAAGGAGGAGCGGTCAAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: AQKRIGEWSKGWPAN*RTDGSGKGGAVKGR
Trigger: CCTCCCTTTGACCGCTCCTCCTTTCCCACTTCCATCAGTTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579203.1
CDS GCA 90 bp GTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTaGGTCCTGATTGGAGGACTCAGTGACCTCCGCCTCGCTCGCCAA +
Preference number: 5 (lower is better)
Translates to: VLLQQKFEQVTGAGK*VLIGGLSDLRLARQ
Trigger: TTGGCGAGCGAGGCGGAGGTCACTGAGTCCTCCAATCAGGACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS CCA 90 bp TCTGAGACCCGGATCTTGGTCACATACGGGGTTAGGCGGAATGGCTaGTACCGAGGCCCTGGATCCCGGTCAGGACCTCCTCTAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SETRILVTYGVRRNG*YRGPGSRSGPPLAK
Trigger: CTTTGCTAGAGGAGGTCCTGACCGGGATCCAGGGCCTCGGTACCAGCCATTCCGCCTAACCCCGTATGTGACCAAGATCCGGGTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578223.1
CDS CCA 90 bp ATGGTGACATACTCCCCGTTGCGGGCACAGAAGCGGATAGGGGAGTaGTCAAAGGGCTGGCCCGCCAACTGCAGAACTGATGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: MVTYSPLRAQKRIGE*SKGWPANCRTDGSG
Trigger: CCCACTTCCATCAGTTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTTCTGTGCCCGCAACGGGGAGTATGTCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579203.1
CDS-3UTR CAA 90 bp GAGGGTACAGCTGAGAACGCCTGGGTCCCACCTGAGGGGCAGCACCAGGGACTCTTGCCACTTGAACCATaGCTGTTGGCATCGGTGTCA +
Preference number: 5 (lower is better)
Translates to: EGTAENAWVPPEGQHQGLLPLEP*LLASVS
Trigger: TGACACCGATGCCAACAGCAATGGTTCAAGTGGCAA...GAGTCCCTGGTGCTGCCCCTCAGGTGGGACCCAGGCGTTCTCAGCTGTACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GCTGTGGAAGAGCTGTCGAGTCCACGCAGCCTGCCCAGGTCTCGGAAGCGGCTGTTGCCACTTGAACCATaGCTGTTGGCATCGGTGTCA +
Preference number: 5 (lower is better)
Translates to: AVEELSSPRSLPRSRKRLLPLEP*LLASVS
Trigger: TGACACCGATGCCAACAGCAATGGTTCAAGTGGCAA...CAGCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CAA 90 bp TGCCCCTGCCCCCAGGCTAGGCCTGAAGTCGCTTACCTGGAGACAGCACCTCTGTGCCCGTTGGACTCATaGCCACTTGAACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: CPCPQARPEVAYLETAPLCPLDS*PLEPLL
Trigger: CAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCA...CAGAGGTGCTGTCTCCAGGTAAGCGACTTCAGGCCTAGCCTGGGGGCAGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp CCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGCCAGAGGCATGCCCGTTGGACTCATaGCCACTTGAACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: PLGWAAEFCSLLPKRPEACPLDS*PLEPLL
Trigger: CAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCA...TGCCTCTGGCCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp AATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCCTGGGCGGCAGTCGAAGCTaGAGCTCTCGAAGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: NGVKSGAGKPSPESCVCLGGSRS*SSRSAV
Trigger: GACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGCC...CAGGCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGGCGGCAGTCGAAGCTaGAGCTCTCGAAGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWGGSRS*SSRSAV
Trigger: GACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGCC...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp CAGTCCACACAGGCCATCACATCAAGAGCCCGAGGCAGTTGGCCCTTCCGGACCTCTGAGACCCGGATCTaGGTCACATACGGGGTTAGG +
Preference number: 5 (lower is better)
Translates to: QSTQAITSRARGSWPFRTSETRI*VTYGVR
Trigger: CCTAACCCCGTATGTGACCAAGATCCGGGTCTCAGA...GGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGGCGGCTGAGGAAGGCTaGCTCTTCCTTCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVAAEEG*LFLLCV
Trigger: CACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGC...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp CCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTACGCGCTGGTCAGCATaGGCCATGAGCAGCCAAATG +
Preference number: 5 (lower is better)
Translates to: PGEGRIPLQRWEVTLLWATRWSA*AMSSQM
Trigger: CATTTGGCTGCTCATGGCCAATGCTGACCAGCGCGT...AGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp CCCAGCCTCAGCCTCGGAAGAGTCGATGCTGCCAAAGTATTTGCTTGTGTGGCTAAGAGCCCGAGGCAGTaGGCCCTTCCGGACCCAGGA +
Preference number: 5 (lower is better)
Translates to: PSLSLGRVDAAKVFACVAKSPRQ*ALPDPG
Trigger: TCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTT...AGCCACACAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGGCTGAGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS TCA 90 bp CTGAGATGCGCCTCTAGACTCATGCCCGTTGGACTCATTGCCACTTaGACCATTGCTGTTGGCATCGGTGTCATCGGCCAGGCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: LRCASRLMPVGLIAT*TIAVGIGVIGQAGA
Trigger: GGCCCCAGCCTGGCCGATGACACCGATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCATGAGTCTAGAGGCGCATCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000577253.5
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
ENST00000584202.1
CDS TCA 90 bp GATACGGCAGAAGACGGACTTCTCCTGGGTAAAGTCCCTGAGGCCTaGACCTGGGACAGACAGGAGAGGAGTGAGCACAGCTTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: DTAEDGLLLGKVPEA*TWDRQERSEHSFLP
Trigger: GGGCAGGAAGCTGTGCTCACTCCTCTCCTGTCTGTCCCAGGTTCAGGCCTCAGGGACTTTACCCAGGAGAAGTCCGTCTTCTGCCGTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579065.1
CDS CCA 90 bp GGCAGGAAGGAGAGGGCAAAGGAGGATCGGGCAAGACTCTGGGACTaGCAGTGCTGGTTCCAAGAAGGAGAGGGGAAAGGGCGATTAGAG +
Preference number: 5 (lower is better)
Translates to: GRKERAKEDRARLWD*QCWFQEGEGKGRLE
Trigger: CTCTAATCGCCCTTTCCCCTCTCCTTCTTGGAACCAGCACTGCCAGTCCCAGAGTCTTGCCCGATCCTCCTTTGCCCTCTCCTTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS-3UTR CAA 90 bp TCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTGCCCGTTGGACTCATaGCCACTTGAACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: SSPKVGGDTPLGWAAEFCCPLDS*PLEPLL
Trigger: CAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCA...GCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp CCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTATGGGCTCTGAGAGTTaGTGCTCTTGCTGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: PLQRWEVTLLWAGLRSSAMGSES*CSCCSQ
Trigger: CTGAGAGCAGCAAGAGCACAAACTCTCAGAGCCCAT...AGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCCCACCTTTGGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp AGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGCGGAACACGTCCCGCTaGCAACGCAGCAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: SWNMERPLQQLVSNFVQGRNTSR*QRSRTA
Trigger: AGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCG...CCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGACGGAACACGTCCCGCTaGCAACGCAGCAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGRNTSR*QRSRTA
Trigger: AGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCG...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GGGTCCTGCTTGGGCCTCAGGCTCTCCTCCCATCTGGGGAGGAGGTGGGAGAGAAACTGCAGAATCTTCTaGTGGATAGCCAGCATGAGG +
Preference number: 5 (lower is better)
Translates to: GSCLGLRLSSHLGRRWERNCRIF*WIASMR
Trigger: CCTCATGCTGGCTATCCACAAGAAGATTCTGCAGTT...TCTCTCCCACCTCCTCCCCAGATGGGAGGAGAGCCTGAGGCCCAAGCAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp TGTCTCCCCGCAATAAATAAGTGCAGCCCCAACCCTCAAGAGTCAGATTCAGGCAGGGACAGCACGGCCTaGGTCAGCCCCACTGGACGG +
Preference number: 5 (lower is better)
Translates to: CLPAINKCSPNPQESDSGRDSTA*VSPTGR
Trigger: CCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCCT...GCCTGAATCTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGAGGGACAGCACGGCCTaGGTCAGCCCCACTGGACGG +
Preference number: 5 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKRDSTA*VSPTGR
Trigger: CCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCCT...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGTGCCAAAGTATTTGCTaGTGTGGCTGCTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRCQSIC*CGCSGC
Trigger: GCAGCCAGAGCAGCCACACAAGCAAATACTTTGGCA...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS GCA 90 bp AAGGAGAGGGCAAAGGAGGATCGGGCAAGACTCTGGGACTGGCAGTaGTGGTTCCAAGAAGGAGAGGGGAAAGGGCGATTAGAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: KERAKEDRARLWDWQ*WFQEGEGKGRLEGE
Trigger: CTCACCCTCTAATCGCCCTTTCCCCTCTCCTTCTTGGAACCAGCACTGCCAGTCCCAGAGTCTTGCCCGATCCTCCTTTGCCCTCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS CCA 90 bp AGGCCCTTCAGCAGGGGTCTGGAGTGCCCCATAAGGATAGCTGGATaGGGTTGGGAACAGATAGTTAGGGAGCACCAAGGCCACCATTGG +
Preference number: 5 (lower is better)
Translates to: RPFSRGLECPIRIAG*GWEQIVREHQGHHW
Trigger: CCAATGGTGGCCTTGGTGCTCCCTAACTATCTGTTCCCAACCCCATCCAGCTATCCTTATGGGGCACTCCAGACCCCTGCTGAAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000581082.5
CDS CCA 90 bp CCAGTTCCCCTCACCTACCTGATACGGCAGAAGACGGACTTCTCCTaGGTAAAGTCCCTGAGGCCTGAACCTGGGACAGACAGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: PVPLTYLIRQKTDFS*VKSLRPEPGTDRRG
Trigger: TCCTCTCCTGTCTGTCCCAGGTTCAGGCCTCAGGGACTTTACCCAGGAGAAGTCCGTCTTCTGCCGTATCAGGTAGGTGAGGGGAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579065.1
CDS-3UTR CAA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGTTGCCACTTGAACCATaGCTGTTGGCATCGGTGTCA +
Preference number: 5 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKLPLEP*LLASVS
Trigger: TGACACCGATGCCAACAGCAATGGTTCAAGTGGCAA...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp AAACCGAGGCTGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTGCTTCAGTTGCCACTTGAACCATaGCTGTTGGCATCGGTGTCA +
Preference number: 5 (lower is better)
Translates to: KPRLLLLHGSEPLPILLQLPLEP*LLASVS
Trigger: TGACACCGATGCCAACAGCAATGGTTCAAGTGGCAA...CTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGCTAGACTCATGCCCGTaGGACTCATTGCCACTTGAA +
Preference number: 5 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKLDSCP*DSLPLE
Trigger: TTCAAGTGGCAATGAGTCCAACGGGCATGAGTCTAG...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp GCCCCAGCCTCAGCCTCGGAAGAGTCGATGCTGCCAAAGTATTTGCTTGTGTGGGTTCCTTCTGAGTCCTaGCCCGGGCTGACTGTTCAC +
Preference number: 5 (lower is better)
Translates to: APASASEESMLPKYLLVWVPSES*PGLTVH
Trigger: GTGAACAGTCAGCCCGGGCAAGGACTCAGAAGGAAC...CCACACAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGGCTGAGGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCGTGACATACTCCCCGTaGCGGGCACAGAAGCGGATA +
Preference number: 5 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVVTYSP*RAQKRI
Trigger: TATCCGCTTCTGTGCCCGCAACGGGGAGTATGTCAC...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GTGACCAGGATCTTGGGTGCTGCTCCCACAGTCCACACAGGCCATCACATCAAGGTGACATACTCCCCGTaGCGGGCACAGAAGCGGATA +
Preference number: 5 (lower is better)
Translates to: VTRILGAAPTVHTGHHIKVTYSP*RAQKRI
Trigger: TATCCGCTTCTGTGCCCGCAACGGGGAGTATGTCAC...CTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGGGGGCCGTGCGTACTTaGTGGCGGCCCAACACGAAG +
Preference number: 5 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTGAVRT*WRPNTK
Trigger: CTTCGTGTTGGGCCGCCACAAAGTACGCACGGCCCC...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGTGGTGCTGGGGAGGTaGCAGCTCTCCAGGTACCTG +
Preference number: 5 (lower is better)
Translates to: VFCLACNGVKSGAGKPSPVVLGR*QLSRYL
Trigger: CAGGTACCTGGAGAGCTGCAACCTCCCCAGCACCAC...AGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp AAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGTGGTGCTGGGGAGGTaGCAGCTCTCCAGGTACCTG +
Preference number: 5 (lower is better)
Translates to: KASHGLLEMVPEWSLAGAVVLGR*QLSRYL
Trigger: CAGGTACCTGGAGAGCTGCAACCTCCCCAGCACCAC...TGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp GCCCCAGCCTCAGCCTCGGAAGAGTCGATGCTGCCAAAGTATTTGCTTGTGTGGGCGGCTGAGGAAGGCTaGCTCTTCCTTCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: APASASEESMLPKYLLVWAAEEG*LFLLCV
Trigger: CACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGC...CCACACAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGGCTGAGGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCACCAAGGCCACCATaGGGGTCACCAAAGGGGCGG +
Preference number: 5 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSAPRPP*GSPKGR
Trigger: CCGCCCCTTTGGTGACCCCAATGGTGGCCTTGGTGC...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGAGGATGCTGCCAAAGTATTaGCTTGTGTGGCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GDTPLGWAAEFCSLLPKRMLPKY*LVWLLW
Trigger: CCAGAGCAGCCACACAAGCAAATACTTTGGCAGCAT...CCTCTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp ACCCAGTTCCCGCCGCTGGTCCTCAGAAAACCGAGGCTGCTGCTTCTGCATGGCATGCTGCCAAAGTATTaGCTTGTGTGGCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: TQFPPLVLRKPRLLLLHGMLPKY*LVWLLW
Trigger: CCAGAGCAGCCACACAAGCAAATACTTTGGCAGCAT...GCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGAAGAGCCCGAGGCAGTaGGCCCTTCCGGACCCAGGA +
Preference number: 5 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKKSPRQ*ALPDPG
Trigger: TCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTT...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS TCA 90 bp AACGCAGCAGGACGGCTGCCTGGTTCTGAAGTGTGTACTCAGACGTaGTGTGCTCCAGCTCCTCCAGGGTATAGGTGGACATGTCCATGG +
Preference number: 5 (lower is better)
Translates to: NAAGRLPGSEVCTQT*CAPAPPGYRWTCPW
Trigger: CCATGGACATGTCCACCTATACCCTGGAGGAGCTGGAGCACATCACGTCTGAGTACACACTTCAGAACCAGGCAGCCGTCCTGCTGCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581082.5
CDS CCA 90 bp ATGGTGACATACTCCCCGTTGCGGGCACAGAAGCGGATAGGGGAGTaGTCAAAGGGCTGGCCCGCCAACTGCAGAATCTTCTTGTGGATA +
Preference number: 5 (lower is better)
Translates to: MVTYSPLRAQKRIGE*SKGWPANCRIFLWI
Trigger: TATCCACAAGAAGATTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTTCTGTGCCCGCAACGGGGAGTATGTCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000578223.1
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
CDS-3UTR CAA 90 bp CTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGCTTGAACCATTGCTGTaGGCATCGGTGTCATCGGCC +
Preference number: 5 (lower is better)
Translates to: LLPIEAVFCLACNGVKSGLEPLL*ASVSSA
Trigger: GGCCGATGACACCGATGCCAACAGCAATGGTTCAAG...CCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GGAGGTGACACTCCTCTGGGCTGGGCTGCGGAGTTCTGCTCTCTGCTCCCTAAGTGGACTCATTGCCACTaGAACCATTGCTGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: GGDTPLGWAAEFCSLLPKWTHCH*NHCCWH
Trigger: ATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCA...CTTAGGGAGCAGAGAGCAGAACTCCGCAGCCCAGCCCAGAGGAGTGTCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCTAGACTCATGCCCGTaGGACTCATTGCCACTTGAA +
Preference number: 5 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVLDSCP*DSLPLE
Trigger: TTCAAGTGGCAATGAGTCCAACGGGCATGAGTCTAG...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GCTGGGCCTGGGGCTAGGCCAGGCAGGTCCTCCATCATGATGATGTCTTTCTTGATGGGCTCTGAGAGTTaGTGCTCTTGCTGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: AGPGARPGRSSIMMMSFLMGSES*CSCCSQ
Trigger: CTGAGAGCAGCAAGAGCACAAACTCTCAGAGCCCAT...CAAGAAAGACATCATCATGATGGAGGACCTGCCTGGCCTAGCCCCAGGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CAA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCCCACTGGTGGACGGGTaGTCCTGCTCTGAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVPLVDG*SCSELA
Trigger: TGCCAGCTCAGAGCAGGACAACCCGTCCACCAGTGG...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGCCACTGGTGGACGGGTaGTCCTGCTCTGAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELPLVDG*SCSELA
Trigger: TGCCAGCTCAGAGCAGGACAACCCGTCCACCAGTGG...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GGCATTCCTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGTTCCTTCTGAGTCCTaGCCCGGGCTGACTGTTCAC +
Preference number: 5 (lower is better)
Translates to: GIPPAHRGRILPSLQWSEVPSES*PGLTVH
Trigger: GTGAACAGTCAGCCCGGGCAAGGACTCAGAAGGAAC...TTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GCAGATGGAGGAAGCAGGGTGAGTCCATGGACACATGGACAGATGGCTCTGGTCTCTGAGACCCGGATCTaGGTCACATACGGGGTTAGG +
Preference number: 5 (lower is better)
Translates to: ADGGSRVSPWTHGQMALVSETRI*VTYGVR
Trigger: CCTAACCCCGTATGTGACCAAGATCCGGGTCTCAGA...GACCAGAGCCATCTGTCCATGTGTCCATGGACTCACCCTGCTTCCTCCATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGGTGACATACTCCCCGTaGCGGGCACAGAAGCGGATA +
Preference number: 5 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVVTYSP*RAQKRI
Trigger: TATCCGCTTCTGTGCCCGCAACGGGGAGTATGTCAC...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp TTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGAACACGAAGGCTACCTaGCGGCTCCAGGGGTGCACA +
Preference number: 5 (lower is better)
Translates to: FIEKGTRPGRGYTRGRAGNTKAT*RLQGCT
Trigger: TGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGTT...CCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGGGGCCGTGCGTACTTaGTGGCGGCCCAACACGAAG +
Preference number: 5 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLGAVRT*WRPNTK
Trigger: CTTCGTGTTGGGCCGCCACAAAGTACGCACGGCCCC...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTGACGGCGGATCTTTCTaGGTCCCCACAGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: GEATSAACQQLCPGEGRIDGGSF*VPTETG
Trigger: TCCAGTCTCTGTGGGGACCAAGAAAGATCCGCCGTC...AATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGCGTGAGCGCTTGGCTTaGGATCGGCAGTGGTGTCGG +
Preference number: 5 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKRERLA*DRQWCR
Trigger: CCGACACCACTGCCGATCCAAAGCCAAGCGCTCACG...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGAGCGCGAGTCCTCTaGCAGCAGAAGTTCGAGCAG +
Preference number: 5 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGGARVL*QQKFEQ
Trigger: CTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCC...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp CCCTATGGTGGGAGAAGCTGGGGCAGTTTCCCACTGGTTGGTCTAGCCACATCTGGCCACTTCAGCAGCTaGTCAGCAACTTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PYGGRSWGSFPLVGLATSGHFSS*SATLSR
Trigger: CCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCC...AGATGTGGCTAGACCAACCAGTGGGAAACTGCCCCAGCTTCTCCCACCATAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGCGTATTCTGCCTAGCTaGCAATGGAGTGAAGAGTGG +
Preference number: 5 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVRILPS*QWSEEW
Trigger: CCACTCTTCACTCCATTGCAAGCTAGGCAGAATACG...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS GCA 90 bp AGCTGCTGGCCCTGGTGCTTCACCAGATGCACATCCTTACAGATCTaGTGGAAAGTCACCTGTGGGACACAGCACCACAGTGAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: SCWPWCFTRCTSLQI*WKVTCGTQHHSEQN
Trigger: GTTCTGCTCACTGTGGTGCTGTGTCCCACAGGTGACTTTCCAGCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCAGGGCCAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS CCA 90 bp TGCTGGCCCTGGTGCTTCACCAGATGCACATCCTTACAGATCTGCTaGAAAGTCACCTGTGGGACACAGCACCACAGTGAGCAGAACCAG +
Preference number: 5 (lower is better)
Translates to: CWPWCFTRCTSLQIC*KVTCGTQHHSEQNQ
Trigger: CTGGTTCTGCTCACTGTGGTGCTGTGTCCCACAGGTGACTTTCCAGCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCAGGGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS-3UTR CAA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGACTTGAACCATTGCTGTaGGCATCGGTGTCATCGGCC +
Preference number: 5 (lower is better)
Translates to: MERPLQQLVSNFVQGREGLEPLL*ASVSSA
Trigger: GGCCGATGACACCGATGCCAACAGCAATGGTTCAAG...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCTTGAACCATTGCTGTaGGCATCGGTGTCATCGGCC +
Preference number: 5 (lower is better)
Translates to: AVFCLACNGVKSGAGKPSLEPLL*ASVSSA
Trigger: GGCCGATGACACCGATGCCAACAGCAATGGTTCAAG...ACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp TGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTGAGTCCTGCGTCTGCTTGCCACTTGAACCATaGCTGTTGGCATCGGTGTCA +
Preference number: 5 (lower is better)
Translates to: CNGVKSGAGKPSPESCVCLPLEP*LLASVS
Trigger: TGACACCGATGCCAACAGCAATGGTTCAAGTGGCAA...GCAGACGCAGGACTCAGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGGGTGTGTGGACTCATTGCCACTaGAACCATTGCTGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: EKGTRPGRGYTRGRAGGVWTHCH*NHCCWH
Trigger: ATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCA...CACACCCCCAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGCTAGACTCATGCCCGTaGGACTCATTGCCACTTGAA +
Preference number: 5 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWLDSCP*DSLPLE
Trigger: TTCAAGTGGCAATGAGTCCAACGGGCATGAGTCTAG...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp CGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTGCGTCCTAGACTCATGCCCGTaGGACTCATTGCCACTTGAA +
Preference number: 5 (lower is better)
Translates to: RVLLQQKFEQVTGAGKCVLDSCP*DSLPLE
Trigger: TTCAAGTGGCAATGAGTCCAACGGGCATGAGTCTAG...GACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp GATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGGGGTCGAGCTGGGCGGCAGTCGAAGCTaGAGCTCTCGAAGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: DLLRKEQGQGEVTRGVELGGSRS*SSRSAV
Trigger: GACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGCC...CAGCTCGACCCCTCGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp CAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCTCTGAGACCCGGATCTaGGTCACATACGGGGTTAGG +
Preference number: 5 (lower is better)
Translates to: QLCPGEGRIPLQRWEVTLSETRI*VTYGVR
Trigger: CCTAACCCCGTATGTGACCAAGATCCGGGTCTCAGA...GAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGTCTGAGACCCGGATCTaGGTCACATACGGGGTTAGG +
Preference number: 5 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVSETRI*VTYGVR
Trigger: CCTAACCCCGTATGTGACCAAGATCCGGGTCTCAGA...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp AAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCAGACGGCGGATCTTTCTaGGTCCCCACAGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: KASHGLLEMVPEWSLAGADGGSF*VPTETG
Trigger: TCCAGTCTCTGTGGGGACCAAGAAAGATCCGCCGTC...TGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGCGGCTGAGGAAGGCTaGCTCTTCCTTCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGAAEEG*LFLLCV
Trigger: CACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGC...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAACGCGCTGGTCAGCATaGGCCATGAGCAGCCAAATG +
Preference number: 5 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGTRWSA*AMSSQM
Trigger: CATTTGGCTGCTCATGGCCAATGCTGACCAGCGCGT...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGAGGGTGACCAGGATCTaGGGTGCTGCTCCCACAGTC +
Preference number: 5 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKRVTRI*GAAPTV
Trigger: GACTGTGGGAGCAGCACCCAAGATCCTGGTCACCCT...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGAGACCCCACCCAGAGTaGGCCCAGAATCTATGCATG +
Preference number: 5 (lower is better)
Translates to: AQTPPRVGPESMHVSSSVRPHPE*AQNLCM
Trigger: CATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCT...CACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp CGGAAGCGGCTGAGGAAGGCTTGCTCTTCCTTCTGTGTGTGCAGGGACAGCACGATGATGATGTCTTTCTaGGTCCCCACAGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: RKRLRKACSSFCVCRDSTMMMSF*VPTETG
Trigger: TCCAGTCTCTGTGGGGACCAAGAAAGACATCATCAT...CGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS GCA 90 bp ACCCATGAAGCTGGCATCCTTCCTCTACCACAGCTTCCCACCTCATaGTCCTCCCCTAAACTAGTGCTATGCGAGGTCAAGGCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: THEAGILPLPQLPTS*SSPKLVLCEVKASK
Trigger: CTTGGAAGCCTTGACCTCGCATAGCACTAGTTTAGGGGAGGAGCATGAGGTGGGAAGCTGTGGTAGAGGAAGGATGCCAGCTTCATGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583677.1
CDS CCA 90 bp GCCAGTGTCAGGGGCCAAGGGCACAATAAAACAAGAAGGTACCAGTaGGGAGGCACAGACGCCTTGATGGGAGCAGGACAAGAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: ASVRGQGHNKTRRYQ*GGTDALMGAGQEGK
Trigger: TTTTCCTTCTTGTCCTGCTCCCATCAAGGCGTCTGTGCCTCCCCACTGGTACCTTCTTGTTTTATTGTGCCCTTGGCCCCTGACACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS-3UTR CAA 90 bp GAAGAAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGCTTGAACCATTGCTGTaGGCATCGGTGTCATCGGCC +
Preference number: 5 (lower is better)
Translates to: EESLSWTPGDGPRMESSWLEPLL*ASVSSA
Trigger: GGCCGATGACACCGATGCCAACAGCAATGGTTCAAG...CCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp TGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGGTGGGAGGTGACACTCCTCTGGTGGACTCATTGCCACTaGAACCATTGCTGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: CPGEGRIPLQRWEVTLLWWTHCH*NHCCWH
Trigger: ATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCA...CCAGAGGAGTGTCACCTCCCACCTTTGGAGAGGAATCCTTCCCTCCCCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000581082.5
ENST00000582719.5
CDS-3UTR CAA 90 bp GCTGGGCCTGGGGCTAGGCCAGGCAGGTCCTCCATCATGATGATGTCTTTCTTGTGGACTCATTGCCACTaGAACCATTGCTGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: AGPGARPGRSSIMMMSFLWTHCH*NHCCWH
Trigger: ATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCA...CAAGAAAGACATCATCATGATGGAGGACCTGCCTGGCCTAGCCCCAGGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS-3UTR CAA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCGTGACATACTCCCCGTaGCGGGCACAGAAGCGGATA +
Preference number: 5 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVVTYSP*RAQKRI
Trigger: TATCCGCTTCTGTGCCCGCAACGGGGAGTATGTCAC...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp CCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGACTCCAACACGAAGGCTACCTaGCGGCTCCAGGGGTGCACA +
Preference number: 5 (lower is better)
Translates to: PRVGPESMHVSSSVTTDSNTKAT*RLQGCT
Trigger: TGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGTT...GGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCGGCTGAGGAAGGCTaGCTCTTCCTTCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSAAEEG*LFLLCV
Trigger: CACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGC...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp ATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATGCCAAAGTATTTGCTaGTGTGGCTGCTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: MERPLQQLVSNFVQGREGCQSIC*CGCSGC
Trigger: GCAGCCAGAGCAGCCACACAAGCAAATACTTTGGCA...TCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp GTCTTTCTTGGTCCCCACAGAGACTGGACCTGTCCTCTGCCTGTCGTCGTCAGACGTATTCTGCCTAGCTaGCAATGGAGTGAAGAGTGG +
Preference number: 5 (lower is better)
Translates to: VFLGPHRDWTCPLPVVVRRILPS*QWSEEW
Trigger: CCACTCTTCACTCCATTGCAAGCTAGGCAGAATACG...TCTGACGACGACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACCAAGAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581395.5
CDS GCA 90 bp GCCCGAGACTCAATAAAAAGCTGCTGGCCCTGGTGCTTCACCAGATaGACATCCTTACAGATCTGCTGGAAAGTCACCTGTGGGACACAG +
Preference number: 5 (lower is better)
Translates to: ARDSIKSCWPWCFTR*TSLQICWKVTCGTQ
Trigger: CTGTGTCCCACAGGTGACTTTCCAGCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCAGGGCCAGCAGCTTTTTATTGAGTCTCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS-3UTR CAA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGCTTGAACCATTGCTGTaGGCATCGGTGTCATCGGCC +
Preference number: 5 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKLEPLL*ASVSSA
Trigger: GGCCGATGACACCGATGCCAACAGCAATGGTTCAAG...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp CTTGAAGCCCAGACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATGCCCGTTGGACTCATaGCCACTTGAACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: LEAQTPPRVGPESMHVSSCPLDS*PLEPLL
Trigger: CAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCA...TGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCTGGGCTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTTCCTTCTGAGTCCTaGCCCGGGCTGACTGTTCAC +
Preference number: 5 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLVPSES*PGLTVH
Trigger: GTGAACAGTCAGCCCGGGCAAGGACTCAGAAGGAAC...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp CCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGACTCCGTTCCTTCTGAGTCCTaGCCCGGGCTGACTGTTCAC +
Preference number: 5 (lower is better)
Translates to: PRVGPESMHVSSSVTTDSVPSES*PGLTVH
Trigger: GTGAACAGTCAGCCCGGGCAAGGACTCAGAAGGAAC...GGAGTCAGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCATCTGAGACCCGGATCTaGGTCACATACGGGGTTAGG +
Preference number: 5 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSSETRI*VTYGVR
Trigger: CCTAACCCCGTATGTGACCAAGATCCGGGTCTCAGA...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp CTCCTGCCCATCGAGGCCGTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGAACTGCAGAATCTTCTaGTGGATAGCCAGCATGAGG +
Preference number: 5 (lower is better)
Translates to: LLPIEAVFCLACNGVKSGNCRIF*WIASMR
Trigger: CCTCATGCTGGCTATCCACAAGAAGATTCTGCAGTT...CCCACTCTTCACTCCATTGCAAGCTAGGCAGAATACGGCCTCGATGGGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GCCCCAGCCTCAGCCTCGGAAGAGTCGATGCTGCCAAAGTATTTGCTTGTGTGGAACTGCAGAATCTTCTaGTGGATAGCCAGCATGAGG +
Preference number: 5 (lower is better)
Translates to: APASASEESMLPKYLLVWNCRIF*WIASMR
Trigger: CCTCATGCTGGCTATCCACAAGAAGATTCTGCAGTT...CCACACAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGGCTGAGGCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp ACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTGACGGCGGATCTTTCTaGGTCCCCACAGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: TPPRVGPESMHVSSSVTTDGGSF*VPTETG
Trigger: TCCAGTCTCTGTGGGGACCAAGAAAGATCCGCCGTC...AGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS-3UTR CAA 90 bp GAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGGCCACTTCAGCAGCTaGTCAGCAACTTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ESDSGSAGIWRGHFSSLSGHFSS*SATLSR
Trigger: CCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCC...TGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGAGACCCCACCCAGAGTaGGCCCAGAATCTATGCATG +
Preference number: 5 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTRPHPE*AQNLCM
Trigger: CATGCATAGATTCTGGGCCAACTCTGGGTGGGGTCT...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GTATTCTGCCTAGCTTGCAATGGAGTGAAGAGTGGGGCTGGAAAGCCCAGTCCTCTAGACTCATGCCCGTaGGACTCATTGCCACTTGAA +
Preference number: 5 (lower is better)
Translates to: VFCLACNGVKSGAGKPSPLDSCP*DSLPLE
Trigger: TTCAAGTGGCAATGAGTCCAACGGGCATGAGTCTAG...AGGACTGGGCTTTCCAGCCCCACTCTTCACTCCATTGCAAGCTAGGCAGAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGATGGGCTCTGAGAGTTaGTGCTCTTGCTGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKMGSES*CSCCSQ
Trigger: CTGAGAGCAGCAAGAGCACAAACTCTCAGAGCCCAT...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp CCAGGGACAAGGGGATTTATTGAGAAAGGAACAAGGCCAGGGAGAGGTTACACGATGGGCTCTGAGAGTTaGTGCTCTTGCTGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: PGTRGFIEKGTRPGRGYTMGSES*CSCCSQ
Trigger: CTGAGAGCAGCAAGAGCACAAACTCTCAGAGCCCAT...CGTGTAACCTCTCCCTGGCCTTGTTCCTTTCTCAATAAATCCCCTTGTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS-3UTR CAA 90 bp GCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAATGCTGCCAAAGTATTaGCTTGTGTGGCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: AGIWRGHFSSLSATLSRGMLPKY*LVWLLW
Trigger: CCAGAGCAGCCACACAAGCAAATACTTTGGCAGCAT...TCCCCTGGACAAAGTTGCTGACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp TTCAGCAGCTTGTCAGCAACTTTGTCCAGGGGAGGGAAGGATTCCTCTCCAAAGAGCTTGTCAGCAACTTaGTCCAGGGGAGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: FSSLSATLSRGGKDSSPKSLSAT*SRGGKD
Trigger: ATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCT...CTTTGGAGAGGAATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp AAAGCCTCTCATGGACTCCTGGAGATGGTCCCAGAATGGAGTCTAGCTGGTGCATGGACTCATTGCCACTaGAACCATTGCTGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: KASHGLLEMVPEWSLAGAWTHCH*NHCCWH
Trigger: ATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCA...TGCACCAGCTAGACTCCATTCTGGGACCATCTCCAGGAGTCCATGAGAGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS-3UTR CAA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTTGCCCGTTGGACTCATaGCCACTTGAACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLCPLDS*PLEPLL
Trigger: CAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCA...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp TCAAGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTAGCTTGTCAGCAACTTaGTCCAGGGGAGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: SRVRFRLSWNMERPLQQLSLSAT*SRGGKD
Trigger: ATCCTTCCCTCCCCTGGACAAAGTTGCTGACAAGCT...AAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp AGAGTCAGATTCAGGCTCAGCTGGAATATGGAGAGGCCACTTCAGCAGCTTGTCAACTGCAGAATCTTCTaGTGGATAGCCAGCATGAGG +
Preference number: 5 (lower is better)
Translates to: RVRFRLSWNMERPLQQLVNCRIF*WIASMR
Trigger: CCTCATGCTGGCTATCCACAAGAAGATTCTGCAGTT...GACAAGCTGCTGAAGTGGCCTCTCCATATTCCAGCTGAGCCTGAATCTGACTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS-3UTR CAA 90 bp ACCCCACCCAGAGTTGGCCCAGAATCTATGCATGTCTCTTCATCAGTGACAACTAACTGCAGAATCTTCTaGTGGATAGCCAGCATGAGG +
Preference number: 5 (lower is better)
Translates to: TPPRVGPESMHVSSSVTTNCRIF*WIASMR
Trigger: CCTCATGCTGGCTATCCACAAGAAGATTCTGCAGTT...AGTTGTCACTGATGAAGAGACATGCATAGATTCTGGGCCAACTCTGGGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354903.9
ENST00000581395.5
CDS CCA 72 bp GCGCTTGGCTTTGGATCGGCAGTGGTGTCGGCGGCTTaGGGGTGCGGGGCCGTGGTGGCAGCCTCGCTCGCC +
Preference number: 6 (lower is better)
Translates to: ALGFGSAVVSAA*GCGAVVAASLA
Trigger: GGCGAGCGAGGCTGCCACCACGGCCCCGCACCCCCAAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
CDS CCA 72 bp GCGGTGAGGAGGACTCGGGGCGAGGGCGGGCAAGGATaGAGAAGGGGAGTGCGAGGCAGGAGTGGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: AVRRTRGEGGQG*RRGVRGRSGRP
Trigger: GGGCCTCCCACTCCTGCCTCGCACTCCCCTTCTCCATCCTTGCCCGCCCTCGCCCCGAGTCCTCCTCACCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS CAA 72 bp AGCGCTTGGCTTTGGATCGGCAGTGGTGTCGGCGGCTaGGGGGTGCGGGGCCGTGGTGGCAGCCTCGCTCGC +
Preference number: 6 (lower is better)
Translates to: SAWLWIGSGVGG*GVRGRGGSLAR
Trigger: GCGAGCGAGGCTGCCACCACGGCCCCGCACCCCCAAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
CDS CAA 90 bp GGCGCTTCAGCCCGAGGGTTCTGGTGGTGGCGTGAGCGCTTGGCTTaGGATCGGCAGTGGTGTCGGCGGCTTGGGGGTGCGGGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: GASARGFWWWRERLA*DRQWCRRLGGAGPW
Trigger: CCACGGCCCCGCACCCCCAAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGCTCACGCCACCACCAGAACCCTCGGGCTGAAGCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
ENST00000581082.5
CDS CAA 72 bp AGCGCTTGGCTTTGGATCGGCAGTGGTGTCGGCGGCTaGGGGGTGCGGGGCCGTGGTGGCAGCCAAGGGCTG +
Preference number: 6 (lower is better)
Translates to: SAWLWIGSGVGG*GVRGRGGSQGL
Trigger: CAGCCCTTGGCTGCCACCACGGCCCCGCACCCCCAAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581082.5
CDS TCA 72 bp TGCGGGGCCGTGGTGGCAGCCTCGCTCGCCAAGGGCTaGGGGAGCTGTGGAAGAGCTGTCGAGTCCACGCAG +
Preference number: 6 (lower is better)
Translates to: CGAVVAASLAKG*GSCGRAVESTQ
Trigger: CTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGAGGCTGCCACCACGGCCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
CDS CCA 72 bp GGCCAGGGTCCCAGAGCGGCCCTTGCCCCGGCGCTCTaGCGGCAGTCGAAGCTTGAGCTCTCGAAGTGCTGT +
Preference number: 6 (lower is better)
Translates to: GQGPRAALAPAL*RQSKLELSKCC
Trigger: ACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGCCAGAGCGCCGGGGCAAGGGCCGCTCTGGGACCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
CDS CCA 72 bp CCCGAGGGTTCTGGTGGTGGCGTGAGCGCTTGGCTTTaGATCGGCAGTGGTGTCGGCGGCTTGGGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: PEGSGGGVSAWL*IGSGVGGLGVR
Trigger: CCGCACCCCCAAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGCTCACGCCACCACCAGAACCCTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
ENST00000581082.5
CDS CCA 72 bp AACCATTGCTGTTGGCATCGGTGTCATCGGCCAGGCTaGGGCCTGGGCAAGGCCGGTGCGCTCGGCGCGCAC +
Preference number: 6 (lower is better)
Translates to: NHCCWHRCHRPG*GLGKAGALGAH
Trigger: GTGCGCGCCGAGCGCACCGGCCTTGCCCAGGCCCCAGCCTGGCCGATGACACCGATGCCAACAGCAATGGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354903.9
CDS CAA 72 bp GCCCGAGGGTTCTGGTGGTGGCGTGAGCGCTTGGCTTaGGATCGGCAGTGGTGTCGGCGGCTTGGGGGTGCG +
Preference number: 6 (lower is better)
Translates to: ARGFWWWRERLA*DRQWCRRLGGA
Trigger: CGCACCCCCAAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGCTCACGCCACCACCAGAACCCTCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
ENST00000581082.5
CDS TCA 72 bp GCAGGGCGCTTCAGCCCGAGGGTTCTGGTGGTGGCGTaGGCGCTTGGCTTTGGATCGGCAGTGGTGTCGGCG +
Preference number: 6 (lower is better)
Translates to: AGRFSPRVLVVA*ALGFGSAVVSA
Trigger: CGCCGACACCACTGCCGATCCAAAGCCAAGCGCTCACGCCACCACCAGAACCCTCGGGCTGAAGCGCCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
ENST00000581082.5
CDS TCA 72 bp CGAGTCCACGCAGCCTGCCCAGGTCTCGGAAGCGGCTaGGGAAGGCTTGCTCTTCCTTCCGACTCCGGGGGC +
Preference number: 6 (lower is better)
Translates to: RVHAACPGLGSG*GRLALPSDSGG
Trigger: GCCCCCGGAGTCGGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578089.1
CDS GCA 72 bp TTGGCCTGCACCTGCTTGACACAGGCCAGTGCGTACTaGAGCGTGGCCAGGGTCCCAGAGCGGCCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: LACTCLTQASAY*SVARVPERPLP
Trigger: GGGCAAGGGCCGCTCTGGGACCCTGGCCACGCTGCAGTACGCACTGGCCTGTGTCAAGCAGGTGCAGGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
CDS CCA 72 bp CTCTCGGCCTCCTCAGGGACCAAGGCTAGTGGGGCCTaGACGGGAGCAGAACCCGCCTCCAGCTCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: LSASSGTKASGA*TGAEPASSSGS
Trigger: AGACCCAGAGCTGGAGGCGGGTTCTGCTCCCGTCCAGGCCCCACTAGCCTTGGTCCCTGAGGAGGCCGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
ENST00000585095.1
CDS GCA 72 bp CAGGTCACTCACTGGCGCAGGAGGCCCAGGCCCCTCTaGATCACCCCCGTTGCTATCACTGGAGGACCCAGG +
Preference number: 6 (lower is better)
Translates to: QVTHWRRRPRPL*ITPVAITGGPR
Trigger: CCTGGGTCCTCCAGTGATAGCAACGGGGGTGATGCAGAGGGGCCTGGGCCTCCTGCGCCAGTGAGTGACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS CCA 72 bp CTTCAGCCCGAGGGTTCTGGTGGTGGCGTGAGCGCTTaGCTTTGGATCGGCAGTGGTGTCGGCGGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: LQPEGSGGGVSA*LWIGSGVGGLG
Trigger: CCCCAAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGCTCACGCCACCACCAGAACCCTCGGGCTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
ENST00000581082.5
CDS CAA 72 bp GCTTCAGCCCGAGGGTTCTGGTGGTGGCGTGAGCGCTaGGCTTTGGATCGGCAGTGGTGTCGGCGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: ASARGFWWWRER*ALDRQWCRRLG
Trigger: CCCAAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGCTCACGCCACCACCAGAACCCTCGGGCTGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000578950.1
ENST00000581082.5
CDS TCA 72 bp CTGCATCTCGAGTTGAACAGTGGAGAGTCCGGGCGGTaGGGAGGACTCGGGGCGAGGGCGGGCAAGGATGGA +
Preference number: 6 (lower is better)
Translates to: LHLELNSGESGR*GGLGARAGKDG
Trigger: TCCATCCTTGCCCGCCCTCGCCCCGAGTCCTCCTCACCGCCCGGACTCTCCACTGTTCAACTCGAGATGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS GCA 72 bp CTGGAAAGTCACTGGCGCAGGAGGCCCAGGCCCCTCTaGATCACCCCCGTTGCTATCACTGGAGGACCCAGG +
Preference number: 6 (lower is better)
Translates to: LESHWRRRPRPL*ITPVAITGGPR
Trigger: CCTGGGTCCTCCAGTGATAGCAACGGGGGTGATGCAGAGGGGCCTGGGCCTCCTGCGCCAGTGACTTTCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000581082.5
ENST00000582719.5
CDS GCA 72 bp CCGGAACACGTCCCGCTTGCAACGCAGCAGGACGGCTaGCTGCTCCGAAATGTAGACGATTCGGCCCGTCAG +
Preference number: 6 (lower is better)
Translates to: PEHVPLATQQDG*LLRNVDDSARQ
Trigger: CTGACGGGCCGAATCGTCTACATTTCGGAGCAGGCAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000579065.1
ENST00000581395.5
ENST00000582719.5
CDS GCA 72 bp GCTCAGAGAAGCGGGTACCCCGGAACACGTCCCGCTTaGAACGCAGCAGGACGGCTGCCTGCTCCGAAATGT +
Preference number: 6 (lower is better)
Translates to: AQRSGYPGTRPA*NAAGRLPAPKC
Trigger: ACATTTCGGAGCAGGCAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCGGGGTACCCGCTTCTCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000579065.1
ENST00000581395.5
ENST00000582719.5
CDS GCA 72 bp TGCGTACTTTGTGGCGGCCCAACACGAAGGCTACCTTaGGGCTCCAGGGGTGCACAAAGCCAGCCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: CVLCGGPTRRLP*GSRGAQSQPSW
Trigger: CCAGCTGGGCTGGCTTTGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGTTGGGCCGCCACAAAGTACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000578223.1
ENST00000579203.1
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
CDS GCA 72 bp GCTCAGAGAAGCGGGTACCCCGGAACACGTCCCGCTTaGAACGCAGCAGGACGGCTGCCTGGTTCTGAAGTG +
Preference number: 6 (lower is better)
Translates to: AQRSGYPGTRPA*NAAGRLPGSEV
Trigger: CACTTCAGAACCAGGCAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCGGGGTACCCGCTTCTCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581082.5
CDS CCA 72 bp GAGCTGGAGTGGAGAGCTGCATCTCGAGTTGAACAGTaGAGAGTCCGGGCGGTGAGGAGGACTCGGGGCGAG +
Preference number: 6 (lower is better)
Translates to: ELEWRAASRVEQ*RVRAVRRTRGE
Trigger: CTCGCCCCGAGTCCTCCTCACCGCCCGGACTCTCCACTGTTCAACTCGAGATGCAGCTCTCCACTCCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317276.9
ENST00000581082.5
CDS CAA 72 bp AGCTCAGAGAAGCGGGTACCCCGGAACACGTCCCGCTaGCAACGCAGCAGGACGGCTGCCTGCTCCGAAATG +
Preference number: 6 (lower is better)
Translates to: SSEKRVPRNTSR*QRSRTAACSEM
Trigger: CATTTCGGAGCAGGCAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCGGGGTACCCGCTTCTCTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000579065.1
ENST00000581395.5
ENST00000582719.5
CDS CAA 72 bp GTGCGTACTTTGTGGCGGCCCAACACGAAGGCTACCTaGCGGCTCCAGGGGTGCACAAAGCCAGCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: VRTLWRPNTKAT*RLQGCTKPAQL
Trigger: CAGCTGGGCTGGCTTTGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGTTGGGCCGCCACAAAGTACGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000578223.1
ENST00000579203.1
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
CDS CAA 72 bp CAGCCTGCCCAGGTCTCGGAAGCGGCTGAGGAAGGCTaGCTCTTCCTTCCGACTCCGGGGGCTTCTTGTCTC +
Preference number: 6 (lower is better)
Translates to: QPAQVSEAAEEG*LFLPTPGASCL
Trigger: GAGACAAGAAGCCCCCGGAGTCGGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCTGGGCAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578089.1
CDS TCA 72 bp CTGCTGGAAAGTCACCTGTGGGACACAGCACCACAGTaGGCAGAACCAGGGGGTGTCGCCAGTGTCAGGGGC +
Preference number: 6 (lower is better)
Translates to: LLESHLWDTAPQ*AEPGGVASVRG
Trigger: GCCCCTGACACTGGCGACACCCCCTGGTTCTGCTCACTGTGGTGCTGTGTCCCACAGGTGACTTTCCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS TCA 72 bp AGTTCGAGCAGGTCACTGGAGCCGGAAAGTGCGTCCTaGTTGGAGGACTCAGTGACCTCCGCCTCGCTCGCC +
Preference number: 6 (lower is better)
Translates to: SSSRSLEPESAS*LEDSVTSASLA
Trigger: GGCGAGCGAGGCGGAGGTCACTGAGTCCTCCAATCAGGACGCACTTTCCGGCTCCAGTGACCTGCTCGAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS GCA 72 bp CAGGGGGTATCCGGGGAGCTTCGTAACCCGAATGGATaGGCTCTGCAATCAGCAGGCAGCACGGCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: QGVSGELRNPNG*ALQSAGSTAVQ
Trigger: CTGCACAGCCGTGCTGCCTGCTGATTGCAGAGCGCATCCATTCGGGTTACGAAGCTCCCCGGATACCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000578223.1
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
CDS GCA 72 bp AACTCCTGTGGGCACTGCCAGCCTAGGCATTCCTCCTaGCCATCGAGGCCGTATTCTGCCTCGCTCGCCAAG +
Preference number: 6 (lower is better)
Translates to: NSCGHCQPRHSS*PSRPYSASLAK
Trigger: CTTGGCGAGCGAGGCAGAATACGGCCTCGATGGGCAGGAGGAATGCCTAGGCTGGCAGTGCCCACAGGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583559.1
CDS CCA 72 bp CGGATCTTGGTCACATACGGGGTTAGGCGGAATGGCTaGTACCGAGGCCCTGGATCCCGGTCAGGACCTCCT +
Preference number: 6 (lower is better)
Translates to: RILVTYGVRRNG*YRGPGSRSGPP
Trigger: AGGAGGTCCTGACCGGGATCCAGGGCCTCGGTACCAGCCATTCCGCCTAACCCCGTATGTGACCAAGATCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000578223.1
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
CDS CCA 72 bp GCCCCACAGCCAAGCCTGGTCTCCATGTACGTTTCTTaGTCACCTCTCTGCCAACGGCTGGCCCTGGGTCCT +
Preference number: 6 (lower is better)
Translates to: APQPSLVSMYVS*SPLCQRLALGP
Trigger: AGGACCCAGGGCCAGCCGTTGGCAGAGAGGTGACCAAGAAACGTACATGGAGACCAGGCTTGGCTGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578950.1
CDS CAA 72 bp TGCCCCACAGCCAAGCCTGGTCTCCATGTACGTTTCTaGGTCACCTCTCTGCCAACGGCTGGCCCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: CPTAKPGLHVRF*VTSLPTAGPGS
Trigger: GGACCCAGGGCCAGCCGTTGGCAGAGAGGTGACCAAGAAACGTACATGGAGACCAGGCTTGGCTGTGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578950.1
CDS CAA 90 bp CTAGACTCATGCCCGTTGGACTCATTGCCACTTGAACCATTGCTGTaGGCATCGGTGTCATCGGCCAGGCTGGGGCCTGGGCAAGGCCGG +
Preference number: 6 (lower is better)
Translates to: LDSCPLDSLPLEPLL*ASVSSARLGPGQGR
Trigger: CCGGCCTTGCCCAGGCCCCAGCCTGGCCGATGACACCGATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCATGAGTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000577253.5
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
ENST00000584202.1
CDS TCA 72 bp ATCATCATCAACTCACCAGGGAGGCGGGGCCGGGACTaGGGCCGGGCCCGAGACTCAATAAAAAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: IIINSPGRRGRD*GRARDSIKSCW
Trigger: CCAGCAGCTTTTTATTGAGTCTCGGGCCCGGCCTCAGTCCCGGCCCCGCCTCCCTGGTGAGTTGATGATGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577424.1
CDS GCA 72 bp TCTCAGTGGTCTCCAGCAGGGCTGAGTCCTTGCCGTTaGCTGAGGAGGAGCTGTGTGAGCTCCGCTGAGATG +
Preference number: 6 (lower is better)
Translates to: SQWSPAGLSPCR*LRRSCVSSAEM
Trigger: CATCTCAGCGGAGCTCACACAGCTCCTCCTCAGGCAACGGCAAGGACTCAGCCCTGCTGGAGACCACTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000577253.5
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
ENST00000584202.1
CDS GCA 72 bp GCGCTCTGGCGGCAGTCGAAGCTTGAGCTCTCGAAGTaGTGTCATGAGTTCCTTCTGAGTCCTTGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: ALWRQSKLELSK*CHEFLLSPCPG
Trigger: GCCCGGGCAAGGACTCAGAAGGAACTCATGACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGCCAGAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
CDS GCA 72 bp CGGATAGGGGAGTGGTCAAAGGGCTGGCCCGCCAACTaGAGAACTGATGGAAGTGGGAAAGGAGGAGCGGTC +
Preference number: 6 (lower is better)
Translates to: RIGEWSKGWPAN*RTDGSGKGGAV
Trigger: GACCGCTCCTCCTTTCCCACTTCCATCAGTTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTCCCCTATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579203.1
CDS GCA 72 bp TGCTGCTTCTGCATGGCTCGGAGCCGCTCCCGATCCTaGTTCAGCACAGAGGTCATGTCCCTGCCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: CCFCMARSRSRS*FSTEVMSLPKK
Trigger: CTTCTTGGGCAGGGACATGACCTCTGTGCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583677.1
CDS CCA 72 bp TACTCCCCGTTGCGGGCACAGAAGCGGATAGGGGAGTaGTCAAAGGGCTGGCCCGCCAACTGCAGAATCTTC +
Preference number: 6 (lower is better)
Translates to: YSPLRAQKRIGE*SKGWPANCRIF
Trigger: GAAGATTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTTCTGTGCCCGCAACGGGGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000578223.1
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
CDS CCA 72 bp TGGGAACAGATAGTTAGGGAGCACCAAGGCCACCATTaGGGTCACCAAAGGGGCGGGGAAAGCAGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: WEQIVREHQGHH*GHQRGGESSWG
Trigger: CCCCCAGCTGCTTTCCCCGCCCCTTTGGTGACCCCAATGGTGGCCTTGGTGCTCCCTAACTATCTGTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000581082.5
CDS CCA 72 bp TACTCCCCGTTGCGGGCACAGAAGCGGATAGGGGAGTaGTCAAAGGGCTGGCCCGCCAACTGCAGAACTGAT +
Preference number: 6 (lower is better)
Translates to: YSPLRAQKRIGE*SKGWPANCRTD
Trigger: ATCAGTTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTTCTGTGCCCGCAACGGGGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579203.1
CDS CAA 72 bp TGCCCGTTGGACTCATTGCCACTTGAACCATTGCTGTaGGCATCGGTGTCATCGGCCAGGCTGGGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: CPLDSLPLEPLL*ASVSSARLGPG
Trigger: CCCAGGCCCCAGCCTGGCCGATGACACCGATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000577253.5
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
ENST00000584202.1
CDS CAA 90 bp GCGCCTCTAGACTCATGCCCGTTGGACTCATTGCCACTTGAACCATaGCTGTTGGCATCGGTGTCATCGGCCAGGCTGGGGCCTGGGCAA +
Preference number: 6 (lower is better)
Translates to: APLDSCPLDSLPLEP*LLASVSSARLGPGQ
Trigger: TTGCCCAGGCCCCAGCCTGGCCGATGACACCGATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCATGAGTCTAGAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000577253.5
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
ENST00000584202.1
CDS TCA 72 bp TTGCCGTTGCCTGAGGAGGAGCTGTGTGAGCTCCGCTaGGATGCGCCTCTAGACTCATGCCCGTTGGACTCA +
Preference number: 6 (lower is better)
Translates to: LPLPEEELCELR*DAPLDSCPLDS
Trigger: TGAGTCCAACGGGCATGAGTCTAGAGGCGCATCTCAGCGGAGCTCACACAGCTCCTCCTCAGGCAACGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000577253.5
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
ENST00000584202.1
CDS TCA 72 bp GGAGTGGTCAAAGGGCTGGCCCGCCAACTGCAGAACTaGTGGAAGTGGGAAAGGAGGAGCGGTCAAAGGGAG +
Preference number: 6 (lower is better)
Translates to: GVVKGLARQLQN*WKWERRSGQRE
Trigger: CTCCCTTTGACCGCTCCTCCTTTCCCACTTCCATCAGTTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579203.1
CDS GCA 72 bp CAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTaGGTCCTGATTGGAGGACTCAGTGACCTCCGCCAG +
Preference number: 6 (lower is better)
Translates to: QQKFEQVTGAGK*VLIGGLSDLRQ
Trigger: CTGGCGGAGGTCACTGAGTCCTCCAATCAGGACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000579098.1
ENST00000581082.5
CDS GCA 72 bp CAGCAGAAGTTCGAGCAGGTCACTGGAGCCGGAAAGTaGGTCCTGATTGGAGGACTCAGTGACCTCCGCCTC +
Preference number: 6 (lower is better)
Translates to: QQKFEQVTGAGK*VLIGGLSDLRL
Trigger: GAGGCGGAGGTCACTGAGTCCTCCAATCAGGACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582719.5
CDS CCA 72 bp GGACCTCCTCTGATACGGCAGAAGACGGACTTCTCCTaGGTAAAGTCCCTGAGGCCTGAACCTGCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: GPPLIRQKTDFS*VKSLRPEPAEA
Trigger: GGCCTCAGCAGGTTCAGGCCTCAGGGACTTTACCCAGGAGAAGTCCGTCTTCTGCCGTATCAGAGGAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
CDS CCA 72 bp CGGGCACAGAAGCGGATAGGGGAGTGGTCAAAGGGCTaGCCCGCCAACTGCAGAATCTTCTTGTGGATAGCC +
Preference number: 6 (lower is better)
Translates to: RAQKRIGEWSKG*PANCRIFLWIA
Trigger: GGCTATCCACAAGAAGATTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTTCTGTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000578223.1
ENST00000581082.5
ENST00000581395.5
ENST00000582719.5
CDS CCA 72 bp GAGAGGGCAAAGGAGGATCGGGCAAGACTCTGGGACTaGCAGTGCTGGTTCCAAGAAGGAGAGGGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: ERAKEDRARLWD*QCWFQEGEGKG
Trigger: CCCTTTCCCCTCTCCTTCTTGGAACCAGCACTGCCAGTCCCAGAGTCTTGCCCGATCCTCCTTTGCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS CCA 72 bp AGGAAGGAGAGGGCAAAGGAGGATCGGGCAAGACTCTaGGACTGGCAGTGCTGGTTCCAAGAAGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: RKERAKEDRARL*DWQCWFQEGEG
Trigger: CCCCTCTCCTTCTTGGAACCAGCACTGCCAGTCCCAGAGTCTTGCCCGATCCTCCTTTGCCCTCTCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS CCA 72 bp CGGGCACAGAAGCGGATAGGGGAGTGGTCAAAGGGCTaGCCCGCCAACTGCAGAACTGATGGAAGTGGGAAA +
Preference number: 6 (lower is better)
Translates to: RAQKRIGEWSKG*PANCRTDGSGK
Trigger: TTTCCCACTTCCATCAGTTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTTCTGTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579203.1
CDS GCA 72 bp ACTCATGCCCGTTGGACTCATTGCCACTTGAACCATTaGTGTTGGCATCGGTGTCATCGGCCAGGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: THARWTHCHLNH*CWHRCHRPGWG
Trigger: GCCCCAGCCTGGCCGATGACACCGATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000577253.5
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
ENST00000584202.1
CDS GCA 72 bp CTGAGCTGGCACTCAGGAGGCTGTAGGCAATGGAACTaGTGGGTGGGGATGGGCTCTGAGAGTTTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: LSWHSGGCRQWN*WVGMGSESLCS
Trigger: AGAGCACAAACTCTCAGAGCCCATCCCCACCCAGCAGTTCCATTGCCTACAGCCTCCTGAGTGCCAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
CDS CCA 72 bp GGCACTCAGGAGGCTGTAGGCAATGGAACTGCTGGGTaGGGATGGGCTCTGAGAGTTTGTGCTCTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: GTQEAVGNGTAG*GWALRVCALAA
Trigger: AGCAGCAAGAGCACAAACTCTCAGAGCCCATCCCCACCCAGCAGTTCCATTGCCTACAGCCTCCTGAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
ENST00000584202.1
CDS CCA 72 bp GCGAGTCCTCTTGCAGCAGAAGTTCGAGCAGGTCACTaGAGCCGGAAAGTGCGTCCTGATTGGAGGACTCAG +
Preference number: 6 (lower is better)
Translates to: ASPLAAEVRAGH*SRKVRPDWRTQ
Trigger: CTGAGTCCTCCAATCAGGACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317276.9
ENST00000579098.1
ENST00000581082.5
ENST00000582719.5
CDS CAA 72 bp GACTCATGCCCGTTGGACTCATTGCCACTTGAACCATaGCTGTTGGCATCGGTGTCATCGGCCAGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: DSCPLDSLPLEP*LLASVSSARLG
Trigger: CCCCAGCCTGGCCGATGACACCGATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCATGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000577253.5
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
ENST00000584202.1
CDS CCA 72 bp GGCCGGGCCCGAGACTCAATAAAAAGCTGCTGGCCCTaGTGCTTCACCAGATGCACATCCTTACAGATCTGC +
Preference number: 6 (lower is better)
Translates to: GRARDSIKSCWP*CFTRCTSLQIC
Trigger: GCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCAGGGCCAGCAGCTTTTTATTGAGTCTCGGGCCCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000577424.1
ENST00000581082.5
ENST00000582719.5
ENST00000585095.1
CDS CCA 72 bp AGCAGGGGTCTGGAGTGCCCCATAAGGATAGCTGGATaGGGTTGGGAACAGATAGTTAGGGAGCACCAAGGC +
Preference number: 6 (lower is better)
Translates to: SRGLECPIRIAG*GWEQIVREHQG
Trigger: GCCTTGGTGCTCCCTAACTATCTGTTCCCAACCCCATCCAGCTATCCTTATGGGGCACTCCAGACCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000581082.5
CDS CCA 72 bp CTCACCTACCTGATACGGCAGAAGACGGACTTCTCCTaGGTAAAGTCCCTGAGGCCTGAACCTGGGACAGAC +
Preference number: 6 (lower is better)
Translates to: LTYLIRQKTDFS*VKSLRPEPGTD
Trigger: GTCTGTCCCAGGTTCAGGCCTCAGGGACTTTACCCAGGAGAAGTCCGTCTTCTGCCGTATCAGGTAGGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579065.1
CDS CCA 72 bp CACTCCAAATTTCTTCTAGGACTTCTAGCATTACACTaGCTCCTCCAAACCCGCCCACGGGCCGGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: HSKFLLGLLALH*LLQTRPRAGLP
Trigger: TGGCAGCCCGGCCCGTGGGCGGGTTTGGAGGAGCCAGTGTAATGCTAGAAGTCCTAGAAGAAATTTGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577253.5
ENST00000581395.5
CDS TCA 72 bp GCCTCTAGACTCATGCCCGTTGGACTCATTGCCACTTaGACCATTGCTGTTGGCATCGGTGTCATCGGCCAG +
Preference number: 6 (lower is better)
Translates to: ASRLMPVGLIAT*TIAVGIGVIGQ
Trigger: CTGGCCGATGACACCGATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCATGAGTCTAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317276.9
ENST00000354903.9
ENST00000577253.5
ENST00000579065.1
ENST00000581082.5
ENST00000581395.5
ENST00000581703.1
ENST00000582719.5
ENST00000584202.1
CDS TCA 72 bp TGCTGTCATGAGTTCCTTCTGAGTCCTTGCCCGGGCTaGCTGTTCACTGCTCTTGCTGCTCTCAGTGGTCTC +
Preference number: 6 (lower is better)
Translates to: CCHEFLLSPCPG*LFTALAALSGL
Trigger: GAGACCACTGAGAGCAGCAAGAGCAGTGAACAGTCAGCCCGGGCAAGGACTCAGAAGGAACTCATGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577253.5
CDS GCA 72 bp GCTGGCATCCTTCCTCTACCACAGCTTCCCACCTCATaGTCCTCCCCTAAACTAGTGCTATGCGAGGTCAAG +
Preference number: 6 (lower is better)
Translates to: AGILPLPQLPTS*SSPKLVLCEVK
Trigger: CTTGACCTCGCATAGCACTAGTTTAGGGGAGGAGCATGAGGTGGGAAGCTGTGGTAGAGGAAGGATGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583677.1
CDS CCA 72 bp GGTCTGGAGTGCCCCATAAGGATAGCTGGATGGGGTTaGGAACAGATAGTTAGGGAGCACCAAGGCCACCAT +
Preference number: 6 (lower is better)
Translates to: GLECPIRIAGWG*EQIVREHQGHH
Trigger: ATGGTGGCCTTGGTGCTCCCTAACTATCTGTTCCCAACCCCATCCAGCTATCCTTATGGGGCACTCCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317276.9
ENST00000578089.1
ENST00000581082.5
CDS GCA 72 bp CCCTGGTGCTTCACCAGATGCACATCCTTACAGATCTaGTGGAAAGTCACCTGTGGGACACAGCACCACAGT +
Preference number: 6 (lower is better)
Translates to: PWCFTRCTSLQI*WKVTCGTQHHS
Trigger: ACTGTGGTGCTGTGTCCCACAGGTGACTTTCCAGCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS GCA 72 bp CTTCCCACCTCATGCTCCTCCCCTAAACTAGTGCTATaGGAGGTCAAGGCTTCCAAGACCAGGAAACCTGCT +
Preference number: 6 (lower is better)
Translates to: LPTSCSSPKLVL*EVKASKTRKPA
Trigger: AGCAGGTTTCCTGGTCTTGGAAGCCTTGACCTCGCATAGCACTAGTTTAGGGGAGGAGCATGAGGTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583677.1
CDS CCA 72 bp TGGTGCTTCACCAGATGCACATCCTTACAGATCTGCTaGAAAGTCACCTGTGGGACACAGCACCACAGTGAG +
Preference number: 6 (lower is better)
Translates to: WCFTRCTSLQIC*KVTCGTQHHSE
Trigger: CTCACTGTGGTGCTGTGTCCCACAGGTGACTTTCCAGCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1
CDS GCA 72 bp TCAATAAAAAGCTGCTGGCCCTGGTGCTTCACCAGATaGACATCCTTACAGATCTGCTGGAAAGTCACCTGT +
Preference number: 6 (lower is better)
Translates to: SIKSCWPWCFTR*TSLQICWKVTC
Trigger: ACAGGTGACTTTCCAGCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCAGGGCCAGCAGCTTTTTATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577424.1
ENST00000585095.1