RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PELP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000141456

Ensembl transcript IDs: ENST00000301396.8, ENST00000436683.6, ENST00000570387.5, ENST00000570571.5, ENST00000570823.5, ENST00000571170.1, ENST00000571347.1, ENST00000572293.7, ENST00000573242.1, ENST00000573506.1, ENST00000573523.5, ENST00000574876.5, ENST00000575101.1, ENST00000575329.5, ENST00000575534.1

Found 386 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGCTGGGGGTCCTCCCCCACCAGGAGTCCCTTCAGGGACCAACTaGGGTGGAGGGAGCGTCACAGGACCAGGAACAGGCGGCGGCGGA +
Preference number: 1 (lower is better)
Translates to: RAGGPPPPGVPSGTN*GGGSVTGPGTGGGG
Trigger: TCCGCCGCCGCCTGTTCCTGGTCCTGTGACGCTCCCTCCACCCCAGTTGGTCCCTGAAGGGACTCCTGGTGGGGGAGGACCCCCAGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 90 bp AGCCGGGGAGGGACAGACACTAGGCCTGGGACAGAAAGGCCTAGGTaGTTGGCTGTGGTGGGAGGTCCAGGGCGTGCCGAGGGCACAGGG +
Preference number: 1 (lower is better)
Translates to: SRGGTDTRPGTERPR*LAVVGGPGRAEGTG
Trigger: CCCTGTGCCCTCGGCACGCCCTGGACCTCCCACCACAGCCAACCACCTAGGCCTTTCTGTCCCAGGCCTAGTGTCTGTCCCTCCCCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 90 bp CCAGGGAGGTGGTTCATGGAGATGTCCCGGAACAGTGCAGGCAGCTaGGCTGCATATCGGAGGAGGTCCCTCAGGACAGCCACGGCCAGC +
Preference number: 1 (lower is better)
Translates to: PGRWFMEMSRNSAGS*AAYRRRSLRTATAS
Trigger: GCTGGCCGTGGCTGTCCTGAGGGACCTCCTCCGATATGCAGCCCAGCTGCCTGCACTGTTCCGGGACATCTCCATGAACCACCTCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 90 bp CCACACGCGAGGATGAGTGCAGACAGCAGGTCCAAGGCCTCAAGGTaGATAGAGGGCAGCAGCAGCAGCCGCAGGGGACCATCTCCATGC +
Preference number: 1 (lower is better)
Translates to: PHARMSADSRSKASR*IEGSSSSRRGPSPC
Trigger: GCATGGAGATGGTCCCCTGCGGCTGCTGCTGCTGCCCTCTATCCACCTTGAGGCCTTGGACCTGCTGTCTGCACTCATCCTCGCGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR GCA 90 bp GAGGTGGTTCATGGAGATGTCCCGGAACAGTGCAGGCAGCTGGGCTaGATATCGGAGGAGGTCCCTCAGGACAGCCACGGCCAGCTCCAT +
Preference number: 1 (lower is better)
Translates to: EVVHGDVPEQCRQLG*ISEEVPQDSHGQLH
Trigger: ATGGAGCTGGCCGTGGCTGTCCTGAGGGACCTCCTCCGATATGCAGCCCAGCTGCCTGCACTGTTCCGGGACATCTCCATGAACCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR GCA 90 bp GGTGAGAAGGCCAGGGAGGTGGTTCATGGAGATGTCCCGGAACAGTaGAGGCAGCTGGGCTGCATATCGGAGGAGGTCCCTCAGGACAGC +
Preference number: 1 (lower is better)
Translates to: GEKAREVVHGDVPEQ*RQLGCISEEVPQDS
Trigger: GCTGTCCTGAGGGACCTCCTCCGATATGCAGCCCAGCTGCCTGCACTGTTCCGGGACATCTCCATGAACCACCTCCCTGGCCTTCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR TCA 90 bp TCGTGTACGGGGAGCTGCCTAGGACCTCACCCTGCTGTACACCCATaGCCAGGGGGAGGACCAGGTCATGCAGTCTCCTGTGAGTCTCCT +
Preference number: 1 (lower is better)
Translates to: SCTGSCLGPHPAVHP*PGGGPGHAVSCESP
Trigger: AGGAGACTCACAGGAGACTGCATGACCTGGTCCTCCCCCTGGTCATGGGTGTACAGCAGGGTGAGGTCCTAGGCAGCTCCCCGTACACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 90 bp CAGCGGGCCAGTCCCGAAAACCTCTGCCGAAGCTGGAGAAGGACATaGGCATCACCATCTTCTGAGGACAGCAGCATCTCCACCCCAGGG +
Preference number: 1 (lower is better)
Translates to: QRASPENLCRSWRRT*ASPSSEDSSISTPG
Trigger: CCCTGGGGTGGAGATGCTGCTGTCCTCAGAAGATGGTGATGCCCATGTCCTTCTCCAGCTTCGGCAGAGGTTTTCGGGACTGGCCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR GCA 90 bp GAGCTGAGCATGAGCCCTAGGCAGCGGGCCAGTCCCGAAAACCTCTaGCGAAGCTGGAGAAGGACATGGGCATCACCATCTTCTGAGGAC +
Preference number: 1 (lower is better)
Translates to: ELSMSPRQRASPENL*RSWRRTWASPSSED
Trigger: GTCCTCAGAAGATGGTGATGCCCATGTCCTTCTCCAGCTTCGGCAGAGGTTTTCGGGACTGGCCCGCTGCCTAGGGCTCATGCTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 90 bp ATGAGCCCTAGGCAGCGGGCCAGTCCCGAAAACCTCTGCCGAAGCTaGAGAAGGACATGGGCATCACCATCTTCTGAGGACAGCAGCATC +
Preference number: 1 (lower is better)
Translates to: MSPRQRASPENLCRS*RRTWASPSSEDSSI
Trigger: GATGCTGCTGTCCTCAGAAGATGGTGATGCCCATGTCCTTCTCCAGCTTCGGCAGAGGTTTTCGGGACTGGCCCGCTGCCTAGGGCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR GCA 90 bp AGGTGGATAGAGGGCAGCAGCAGCAGCCGCAGGGGACCATCTCCATaGAAGCTAATATTCTTGCTACTGACGCTGAGGGTCCGGCAGATG +
Preference number: 1 (lower is better)
Translates to: RWIEGSSSSRRGPSP*KLIFLLLTLRVRQM
Trigger: CATCTGCCGGACCCTCAGCGTCAGTAGCAAGAATATTAGCTTGCATGGAGATGGTCCCCTGCGGCTGCTGCTGCTGCCCTCTATCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 90 bp AGAGTGGGGTGCAGAAGATGGCTAGGAGTCAGGCTCTGTGGGAGGTaGTGGCTTCTCATCATCAGGGGGACAATCGATGAAGTCGGCCAG +
Preference number: 1 (lower is better)
Translates to: RVGCRRWLGVRLCGR*WLLIIRGTIDEVGQ
Trigger: CTGGCCGACTTCATCGATTGTCCCCCTGATGATGAGAAGCCACCACCTCCCACAGAGCCTGACTCCTAGCCATCTTCTGCACCCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR TCA 90 bp GCTCTGTGGGAGGTGGTGGCTTCTCATCATCAGGGGGACAATCGATaGAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCTCCTTTTCCT +
Preference number: 1 (lower is better)
Translates to: ALWEVVASHHQGDNR*SRPAWQLCHPAPFP
Trigger: AGGAAAAGGAGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGATGATGAGAAGCCACCACCTCCCACAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR GCA 90 bp TTGCTACTGACGCTGAGGGTCCGGCAGATGAAATCCAGGATTTCCTaGACAGGGACGGACACGGGAGCTCCAAACTCAGAGCTGAGCATG +
Preference number: 1 (lower is better)
Translates to: LLLTLRVRQMKSRIS*TGTDTGAPNSELSM
Trigger: CATGCTCAGCTCTGAGTTTGGAGCTCCCGTGTCCGTCCCTGTGCAGGAAATCCTGGATTTCATCTGCCGGACCCTCAGCGTCAGTAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 90 bp CACTGGGTGGGAAATATCCACACCTCAAGAGTGAGCAGGAAGGCCTaGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAAC +
Preference number: 1 (lower is better)
Translates to: HWVGNIHTSRVSRKA*GELIKLLPGSCEGN
Trigger: GTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGATATTTCCCACCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR CCA 90 bp ATCACTGCTGTTGATATTAATAACTGTCAAATCCTCTTCCAGGGCTaGGGGTCCTCCCCCACCAGGAGTCCCTTCAGGGACCAACTGGGG +
Preference number: 1 (lower is better)
Translates to: ITAVDINNCQILFQG*GSSPTRSPFRDQLG
Trigger: CCCCAGTTGGTCCCTGAAGGGACTCCTGGTGGGGGAGGACCCCCAGCCCTGGAAGAGGATTTGACAGTTATTAATATCAACAGCAGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR GCA 90 bp ATGCGTGTGGGCATGTGGGTGTTGACACAGGTCCACTCACTAGGATaGATTCTCCACACATTTCCCACCCCGAATACAAACACGAAAGCA +
Preference number: 1 (lower is better)
Translates to: MRVGMWVLTQVHSLG*ILHTFPTPNTNTKA
Trigger: TGCTTTCGTGTTTGTATTCGGGGTGGGAAATGTGTGGAGAATGCATCCTAGTGAGTGGACCTGTGTCAACACCCACATGCCCACACGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR TCA 90 bp CGTTTAGCATCCAGCCAGAATCCTACAATTCTGACACCATCGTGCTaGGTGATGGGACAGTCCATTACACCAATGTCAGTTGTTCCTCTC +
Preference number: 1 (lower is better)
Translates to: RLASSQNPTILTPSC*VMGQSITPMSVVPL
Trigger: GAGAGGAACAACTGACATTGGTGTAATGGACTGTCCCATCACTCAGCACGATGGTGTCAGAATTGTAGGATTCTGGCTGGATGCTAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR CCA 90 bp ACAGAGGTCATTCCCAACGTACCCACTACGGACACCCTTTCATCTTaGGGTAAGGTCCAAATTTCCCAGAATTCAATGACTAAACTGCTC +
Preference number: 1 (lower is better)
Translates to: TEVIPNVPTTDTLSS*GKVQISQNSMTKLL
Trigger: GAGCAGTTTAGTCATTGAATTCTGGGAAATTTGGACCTTACCCCAAGATGAAAGGGTGTCCGTAGTGGGTACGTTGGGAATGACCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR CAA 90 bp CGGCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATaGCTATCCCCTTTCCGGTGGCTTGGCGGGGCCATAGCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: RLRPLSAAAHTSLLA*LSPFRWLGGAIASP
Trigger: GGGGGAAGCTATGGCCCCGCCAAGCCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR GCA 90 bp CAGGCGGCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGCCCCCAGCAGGGTGTaGAGTGAGGCCAGCAGACTG +
Preference number: 2 (lower is better)
Translates to: QAADQDPKAQEPASTREDAPSRV*SEASRL
Trigger: CAGTCTGCTGGCCTCACTGCACACCCTGCTGGGGGC...ATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGCCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR GCA 90 bp ATCAGGGGGACAATCGATGAAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCTCGTGGGGCCCATGGGCTaGAGGGGAGGAACCCGGGGG +
Preference number: 2 (lower is better)
Translates to: IRGTIDEVGQHGSCVILLVGPMG*RGGTRG
Trigger: CCCCCGGGTTCCTCCCCTGCAGCCCATGGGCCCCAC...GAGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CAA 90 bp ATGGTCCGGCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTaGGCATTGCTATCCCCTTTCCGGTGGCTTGGCGGGGCCATAGCT +
Preference number: 2 (lower is better)
Translates to: MVRLRPLSAAAHTSL*ALLSPFRWLGGAIA
Trigger: AGCTATGGCCCCGCCAAGCCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGCCGGACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR GCA 90 bp CAGGCGGCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATTGCAGGCAGCTGGGCTaGATATCGGAGGAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: QAADQDPKAQEPASTREDCRQLG*ISEEVP
Trigger: AGGGACCTCCTCCGATATGCAGCCCAGCTGCCTGCA...ATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGCCGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CCA 90 bp CAGGCGGCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATAACAGTGCAGGCAGCTaGGCTGCATATCGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: QAADQDPKAQEPASTREDNSAGS*AAYRRR
Trigger: CCTCCTCCGATATGCAGCCCAGCTGCCTGCACTGTT...ATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGCCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CAA 90 bp CTCTCCTGGCCTGGAGAGAGGGAATCTCTACCGATGCTCCAGGAATaGAGGACCTGGGGAAGCAGGCGGCCGATCAGGATCCCAAAGCGC +
Preference number: 2 (lower is better)
Translates to: LSWPGERESLPMLQE*RTWGSRRPIRIPKR
Trigger: GCGCTTTGGGATCCTGATCGGCCGCCTGCTTCCCCAGGTCCTCAATTCCTGGAGCATCGGTAGAGATTCCCTCTCTCCAGGCCAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR TCA 90 bp CAGGCGGCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGGCATCACCATCTTCTaGGGACAGCAGCATCTCCAC +
Preference number: 2 (lower is better)
Translates to: QAADQDPKAQEPASTREDGITIF*GQQHLH
Trigger: GTGGAGATGCTGCTGTCCTCAGAAGATGGTGATGCC...ATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGCCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR TCA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTAGCCCAGCAGACACTTaGGCTTCTGGCTGGGGACCC +
Preference number: 2 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACSPADT*ASGWGP
Trigger: GGGTCCCCAGCCAGAAGCTCAAGTGTCTGCTGGGCT...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR GCA 90 bp CCACCCCAGGGCCTTCATTCTGCACAGGAGCAGTCTCTGCTCCCTCGTACAGGGAGACTGTGTAGCTCCTaGTCCCAGCTCTCGGTGTGC +
Preference number: 2 (lower is better)
Translates to: PPQGLHSAQEQSLLPRTGRLCSS*SQLSVC
Trigger: GCACACCGAGAGCTGGGAGCAGGAGCTACACAGTCT...CCCTGTACGAGGGAGCAGAGACTGCTCCTGTGCAGAATGAAGGCCCTGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CCA 90 bp GCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCAGGCCTCTCCTGGCCTaGAGAGAGGGAATCTCTACC +
Preference number: 2 (lower is better)
Translates to: AEASECSRTHVAVGIAIPRPLLA*REGIST
Trigger: GGTAGAGATTCCCTCTCTCCAGGCCAGGAGAGGCCT...GGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CCA 90 bp GCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCCTTAAGGGCATCAGCTaGCGGGGAGATGTCGCTGAG +
Preference number: 2 (lower is better)
Translates to: AEASECSRTHVAVGIAIPLKGIS*RGDVAE
Trigger: CTCAGCGACATCTCCCCGCCAGCTGATGCCCTTAAG...GGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CCA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTATCCTCTTCCAGGGCTaGGGGTCCTCCCCCACCAGG +
Preference number: 2 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLILFQG*GSSPTR
Trigger: CCTGGTGGGGGAGGACCCCCAGCCCTGGAAGAGGAT...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR TCA 90 bp GCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCGGGTCCTGGGTCTTCTaGGGAATGCCACGGTTAATG +
Preference number: 2 (lower is better)
Translates to: ADQDPKAQEPASTREDECGSWVF*GMPRLM
Trigger: CATTAACCGTGGCATTCCTCAGAAGACCCAGGACCC...GCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR TCA 90 bp CAGGCGGCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATCATTCCTTCCAATGCTaGCTGCTCACACTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: QAADQDPKAQEPASTREDHSFQC*LLTLWP
Trigger: AGGCCAGAGTGTGAGCAGTCAGCATTGGAAGGAATG...ATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGCCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR TCA 90 bp AAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGCAGGTCCAAGGCCTCAAGGCCAGCTTGCCTTTaGGAGAACCACAAGCCCGAG +
Preference number: 2 (lower is better)
Translates to: KSRLPHARMSADSRSKASRPACL*ENHKPE
Trigger: CTCGGGCTTGTGGTTCTCTCAAAGGCAAGCTGGCCT...TGAGGCCTTGGACCTGCTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR TCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATTTCAGACCAAGGGGCTaGGCACGCATGCGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHFRPRG*ARMRVG
Trigger: GCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAA...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR GCA 90 bp CAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGGATGTCCCGGAACAGTaGAGGCAGCTGGGCTGCATA +
Preference number: 2 (lower is better)
Translates to: QDPKAQEPASTREDECRQDVPEQ*RQLGCI
Trigger: TATGCAGCCCAGCTGCCTGCACTGTTCCGGGACATC...CTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR GCA 90 bp GCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCCCTTCCAATGCTGACTaGTCACACTCTGGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: ADQDPKAQEPASTREDECPSNAD*SHSGLR
Trigger: CCTCAGGCCAGAGTGTGAGCAGTCAGCATTGGAAGG...GCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR GCA 90 bp GCTGTTGGCATTGCTATCCCCTTTCCGGTGGCTTGGCGGGGCCATAGCTTCCCCTCCCAGCTCTCGGTGTaGTTCAGGCCTTGGGAAAAG +
Preference number: 2 (lower is better)
Translates to: AVGIAIPFPVAWRGHSFPSQLSV*FRPWEK
Trigger: CTTTTCCCAAGGCCTGAAGCACACCGAGAGCTGGGA...GGGGAAGCTATGGCCCCGCCAAGCCACCGGAAAGGGGATAGCAATGCCAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR GCA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACGCTGAGGCCTCTGAGTaGAGCCGCACACACGTCGCT +
Preference number: 2 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHAEASE*SRTHVA
Trigger: AGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CCA 90 bp AAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGCAGGTCCAAGGCCTCAAGAAGGCCAGGGAGGTaGTTCATGGAGATGTCCCGG +
Preference number: 2 (lower is better)
Translates to: KSRLPHARMSADSRSKASRRPGR*FMEMSR
Trigger: CCGGGACATCTCCATGAACCACCTCCCTGGCCTTCT...TGAGGCCTTGGACCTGCTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR TCA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACGATGGGGTCCTCATTTaGGCCTGCCCGGTGGTTCTC +
Preference number: 2 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHDGVLI*ACPVVL
Trigger: GAGAACCACCGGGCAGGCTCAAATGAGGACCCCATC...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR GCA 90 bp CTAATATCGCATACACCTTGGTCCGAACCGTGCTGTAAGGCCTCTCCTGGCCTGCACAGGAGCAGTCTCTaGTCCCTCGTACAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: LISHTPWSEPCCKASPGLHRSSL*SLVQGP
Trigger: GGGGCCCTGTACGAGGGAGCAGAGACTGCTCCTGTG...CAGGCCAGGAGAGGCCTTACAGCACGGTTCGGACCAAGGTGTATGCGATATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CCA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACAAAGGCCTAGGTGGTTaGCTGTGGTGGGAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHKGLGG*LWWEVQ
Trigger: CTGGACCTCCCACCACAGCCAACCACCTAGGCCTTT...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CCA 90 bp ATCAGGGGGACAATCGATGAAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCTCCTCTTCCAACAGGGTTaGGGGAGCAGAGGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: IRGTIDEVGQHGSCVILLLFQQG*GSRGLF
Trigger: GAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAG...GAGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR GCA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTAGTCCCGAAAACCTCTaGCGAAGCTGGAGAAGGACA +
Preference number: 2 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLSPENL*RSWRRT
Trigger: TGTCCTTCTCCAGCTTCGGCAGAGGTTTTCGGGACT...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR GCA 90 bp GCCCCTCGGGCACGATCACCACGCTGTCATCAGAGTCACTTTCCAAGGAGATCTGAGGCCCCACAAACCTaGACCCACAGCTCTAATATC +
Preference number: 2 (lower is better)
Translates to: APRARSPRCHQSHFPRRSEAPQT*THSSNI
Trigger: GATATTAGAGCTGTGGGTGCAGGTTTGTGGGGCCTC...AGATCTCCTTGGAAAGTGACTCTGATGACAGCGTGGTGATCGTGCCCGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR GCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTAGGGGCTGAGCACGCATaGGTGTGGGCATGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLGAEHA*VWACGC
Trigger: ACACCCACATGCCCACACGCATGCGTGCTCAGCCCC...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR CCA 90 bp GCCCCTCGGGCACGATCACCACGCTGTCATCAGAGTCACTTTCCAAGGAGATCTGTGTGCTTCAGGCCTTaGGAAAAGCCAGCCCCTAAA +
Preference number: 2 (lower is better)
Translates to: APRARSPRCHQSHFPRRSVCFRP*EKPAPK
Trigger: TTTAGGGGCTGGCTTTTCCCAAGGCCTGAAGCACAC...AGATCTCCTTGGAAAGTGACTCTGATGACAGCGTGGTGATCGTGCCCGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CAA 90 bp AGCAGCAGCAGCCGCAGGGGACCATCTCCATGCAAGCTAATATTCTaGCTACTGACGCTGAGGGTCCGGCAGATGAAATCCAGGATTTCC +
Preference number: 2 (lower is better)
Translates to: SSSSRRGPSPCKLIF*LLTLRVRQMKSRIS
Trigger: GGAAATCCTGGATTTCATCTGCCGGACCCTCAGCGTCAGTAGCAAGAATATTAGCTTGCATGGAGATGGTCCCCTGCGGCTGCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR TCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTATCCACACCTCAAGAGTaGGCAGGAAGGCCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLSTPQE*AGRPGV
Trigger: CACCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGA...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR CCA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACAGCTGGAGAAGGACATaGGCATCACCATCTTCTGAG +
Preference number: 2 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHSWRRT*ASPSSE
Trigger: CTCAGAAGATGGTGATGCCCATGTCCTTCTCCAGCT...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTAGACACTTGAGCTTCTaGCTGGGGACCCAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSRHLSF*LGTQVW
Trigger: CCACACCTGGGTCCCCAGCCAGAAGCTCAAGTGTCT...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR CCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTAAAAGAGGACAGCTATaGAGACATCTGGGGAATACT +
Preference number: 2 (lower is better)
Translates to: PALSDQGAEHACVWACGCKRGQL*RHLGNT
Trigger: AGTATTCCCCAGATGTCTCCATAGCTGTCCTCTTTT...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR TCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTACAGGAAGGCCTGGGGTaGGCTTATCAAACTCCTGCC +
Preference number: 2 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLQEGLG*AYQTPA
Trigger: GGCAGGAGTTTGATAAGCTCACCCCAGGCCTTCCTG...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR TCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTAAGGCAGGTGGACCATaGGCTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSKAGGP*AQEFKT
Trigger: GGTCTTGAACTCCTGAGCTCATGGTCCACCTGCCTT...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR GCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTAGCTTATCAAACTCCTaGCAGGGAGCTGTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSSLSNS*QGAVRG
Trigger: TCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCT...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR GCA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTAGGGGACCATCTCCATaGAAGCTAATATTCTTGCTA +
Preference number: 2 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLRGPSP*KLIFLL
Trigger: TAGCAAGAATATTAGCTTGCATGGAGATGGTCCCCT...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATTCAGTTGTTCCTCTCTaGATCGTCAAAAAGAGGACA +
Preference number: 2 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHSVVPL*IVKKRT
Trigger: TGTCCTCTTTTTGACGATCCAGAGAGGAACAACTGA...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR TCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTAGGCAGAGGTTGCAGTaGGCTGAGACCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVRQRLQ*AETMPL
Trigger: CAGTGGCATGGTCTCAGCTCACTGCAACCTCTGCCT...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR CCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTAAGCTATGGAGACATCTaGGGAATACTATGGACACCC +
Preference number: 2 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLSYGDI*GILWTP
Trigger: GGGTGTCCATAGTATTCCCCAGATGTCTCCATAGCT...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR TCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTCACCATCGTGCTGAGTaGTGGGACAGTCCATTACAC +
Preference number: 2 (lower is better)
Translates to: KIIHVKESGMGRATVSTAHHRAE*WDSPLH
Trigger: GTGTAATGGACTGTCCCATCACTCAGCACGATGGTG...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR TCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAACCTGCCAGGGAGCTGTaGGGGGAACTGTCATTAGGA +
Preference number: 2 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKPAREL*GELSLG
Trigger: TCCTAATGACAGTTCCCCTCACAGCTCCCTGGCAGG...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR TCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAGAGGTTGCAGTGAGCTaGGACCATGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKEVAVS*DHATAL
Trigger: GAGTGCAGTGGCATGGTCTCAGCTCACTGCAACCTC...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR TCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTATTTCCCAGAATTCAATaGCTAAACTGCTCCACACCT +
Preference number: 2 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLFPRIQ*LNCSTP
Trigger: AGGTGTGGAGCAGTTTAGTCATTGAATTCTGGGAAA...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR TCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAACTGACACCATCGTGCTaGGTGATGGGACAGTCCATT +
Preference number: 2 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKLTPSC*VMGQSI
Trigger: AATGGACTGTCCCATCACTCAGCACGATGGTGTCAG...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR TCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAAGGCAGAGAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKRQRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTCTGCCT...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR GCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAACCCTACACACAATTCTaGACGTTTAGCATCCAGCCA +
Preference number: 2 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKPYTQF*TFSIQP
Trigger: TGGCTGGATGCTAAACGTGCAGAATTGTGTGTAGGG...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR CCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTAGAAAAGACACTGGGTaGGAAATATCCACACCTCAA +
Preference number: 2 (lower is better)
Translates to: KIIHVKESGMGRATVSTARKDTG*EISTPQ
Trigger: TTGAGGTGTGGATATTTCCCACCCAGTGTCTTTTCT...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR CCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAATTAAAGAAAAGACACTaGGACAGTCAGGTGCGGTGT +
Preference number: 2 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKLKKRH*DSQVRC
Trigger: ACACCGCACCTGACTGTCCCAGTGTCTTTTCTTTAA...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR CCA 72 bp GCTCCCCCGCGGGCTACGCAGCTTAAGGGCATCAGCTaGCGGGGAGATGTCGCTGAGCAGGTGGGTGAGCAG +
Preference number: 3 (lower is better)
Translates to: APPRATQLKGIS*RGDVAEQVGEQ
Trigger: CTGCTCACCCACCTGCTCAGCGACATCTCCCCGCCAGCTGATGCCCTTAAGCTGCGTAGCCCGCGGGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 72 bp GGAGGTCCCTCAGGACAGCCACGGCCAGCTCCATTGTaGCAGGCGGGTCCTGGGTCTTCTGAGGAATGCCAC +
Preference number: 3 (lower is better)
Translates to: GGPSGQPRPAPL*QAGPGSSEECH
Trigger: GTGGCATTCCTCAGAAGACCCAGGACCCGCCTGCCACAATGGAGCTGGCCGTGGCTGTCCTGAGGGACCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 72 bp CAGACACTAGGCCTGGGACAGAAAGGCCTAGGTGGTTaGCTGTGGTGGGAGGTCCAGGGCGTGCCGAGGGCA +
Preference number: 3 (lower is better)
Translates to: QTLGLGQKGLGG*LWWEVQGVPRA
Trigger: TGCCCTCGGCACGCCCTGGACCTCCCACCACAGCCAACCACCTAGGCCTTTCTGTCCCAGGCCTAGTGTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 72 bp GGGACAGACACTAGGCCTGGGACAGAAAGGCCTAGGTaGTTGGCTGTGGTGGGAGGTCCAGGGCGTGCCGAG +
Preference number: 3 (lower is better)
Translates to: GTDTRPGTERPR*LAVVGGPGRAE
Trigger: CTCGGCACGCCCTGGACCTCCCACCACAGCCAACCACCTAGGCCTTTCTGTCCCAGGCCTAGTGTCTGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR GCA 72 bp CATGGAGATGTCCCGGAACAGTGCAGGCAGCTGGGCTaGATATCGGAGGAGGTCCCTCAGGACAGCCACGGC +
Preference number: 3 (lower is better)
Translates to: HGDVPEQCRQLG*ISEEVPQDSHG
Trigger: GCCGTGGCTGTCCTGAGGGACCTCCTCCGATATGCAGCCCAGCTGCCTGCACTGTTCCGGGACATCTCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CAA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACCAGGAGGGGAGGCTGTaGGTGGCCCAGTGGGGGCTA +
Preference number: 3 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHQEGRL*VAQWGL
Trigger: TAGCCCCCACTGGGCCACCAACAGCCTCCCCTCCTG...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR TCA 72 bp GGGAGCTGCCTAGGACCTCACCCTGCTGTACACCCATaGCCAGGGGGAGGACCAGGTCATGCAGTCTCCTGT +
Preference number: 3 (lower is better)
Translates to: GSCLGPHPAVHP*PGGGPGHAVSC
Trigger: ACAGGAGACTGCATGACCTGGTCCTCCCCCTGGTCATGGGTGTACAGCAGGGTGAGGTCCTAGGCAGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR GCA 72 bp GCCAGGGAGGTGGTTCATGGAGATGTCCCGGAACAGTaGAGGCAGCTGGGCTGCATATCGGAGGAGGTCCCT +
Preference number: 3 (lower is better)
Translates to: AREVVHGDVPEQ*RQLGCISEEVP
Trigger: AGGGACCTCCTCCGATATGCAGCCCAGCTGCCTGCACTGTTCCGGGACATCTCCATGAACCACCTCCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 72 bp AGCTCCTGCTCCCAGCTCTCGGTGTGCTTCAGGCCTTaGGAAAAGCCAGCCCCTAAAGAGGGCAGCCGGGAA +
Preference number: 3 (lower is better)
Translates to: SSCSQLSVCFRP*EKPAPKEGSRE
Trigger: TTCCCGGCTGCCCTCTTTAGGGGCTGGCTTTTCCCAAGGCCTGAAGCACACCGAGAGCTGGGAGCAGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 72 bp TGGTTCATGGAGATGTCCCGGAACAGTGCAGGCAGCTaGGCTGCATATCGGAGGAGGTCCCTCAGGACAGCC +
Preference number: 3 (lower is better)
Translates to: WFMEMSRNSAGS*AAYRRRSLRTA
Trigger: GGCTGTCCTGAGGGACCTCCTCCGATATGCAGCCCAGCTGCCTGCACTGTTCCGGGACATCTCCATGAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CAA 90 bp CTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCTTTCCGGTGGGAGGCCAGCTTGCCTTaGAGAGAACCACAAGCCCGA +
Preference number: 3 (lower is better)
Translates to: LSAAAHTSLLALLSPFRWEASLP*REPQAR
Trigger: TCGGGCTTGTGGTTCTCTCAAAGGCAAGCTGGCCTC...CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR GCA 72 bp ATGAGCCCTAGGCAGCGGGCCAGTCCCGAAAACCTCTaGCGAAGCTGGAGAAGGACATGGGCATCACCATCT +
Preference number: 3 (lower is better)
Translates to: MSPRQRASPENL*RSWRRTWASPS
Trigger: AGATGGTGATGCCCATGTCCTTCTCCAGCTTCGGCAGAGGTTTTCGGGACTGGCCCGCTGCCTAGGGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 72 bp AGGCAGCGGGCCAGTCCCGAAAACCTCTGCCGAAGCTaGAGAAGGACATGGGCATCACCATCTTCTGAGGAC +
Preference number: 3 (lower is better)
Translates to: RQRASPENLCRS*RRTWASPSSED
Trigger: GTCCTCAGAAGATGGTGATGCCCATGTCCTTCTCCAGCTTCGGCAGAGGTTTTCGGGACTGGCCCGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CAA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTCTCACAGGCCAACTGTaGGAGCTGAGGGCTCAAGGC +
Preference number: 3 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLLTGQL*ELRAQG
Trigger: GCCTTGAGCCCTCAGCTCCAACAGTTGGCCTGTGAG...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CAA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACCCGATGCTCCAGGAATaGAGGACCTGGGGAAGCAGG +
Preference number: 3 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHPMLQE*RTWGSR
Trigger: CCTGCTTCCCCAGGTCCTCAATTCCTGGAGCATCGG...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CAA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACGAAAGGCCTAGGTGGTaGGCTGTGGTGGGAGGTCCA +
Preference number: 3 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHERPRW*AVVGGP
Trigger: TGGACCTCCCACCACAGCCAACCACCTAGGCCTTTC...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CAA 90 bp GCCCCTCGGGCACGATCACCACGCTGTCATCAGAGTCACTTTCCAAGGAGATCTGGATGGGGTCCTCATTaGAGCCTGCCCGGTGGTTCT +
Preference number: 3 (lower is better)
Translates to: APRARSPRCHQSHFPRRSGWGPH*SLPGGS
Trigger: AGAACCACCGGGCAGGCTCAAATGAGGACCCCATCC...AGATCTCCTTGGAAAGTGACTCTGATGACAGCGTGGTGATCGTGCCCGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CAA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTACGTCGCTGTTGGCATaGCTATCCCCTTTCCGGTGG +
Preference number: 3 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLTSLLA*LSPFRW
Trigger: CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGT...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR GCA 72 bp ACGCTGAGGGTCCGGCAGATGAAATCCAGGATTTCCTaGACAGGGACGGACACGGGAGCTCCAAACTCAGAG +
Preference number: 3 (lower is better)
Translates to: TLRVRQMKSRIS*TGTDTGAPNSE
Trigger: CTCTGAGTTTGGAGCTCCCGTGTCCGTCCCTGTGCAGGAAATCCTGGATTTCATCTGCCGGACCCTCAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR GCA 72 bp GAGGGCAGCAGCAGCAGCCGCAGGGGACCATCTCCATaGAAGCTAATATTCTTGCTACTGACGCTGAGGGTC +
Preference number: 3 (lower is better)
Translates to: EGSSSSRRGPSP*KLIFLLLTLRV
Trigger: GACCCTCAGCGTCAGTAGCAAGAATATTAGCTTGCATGGAGATGGTCCCCTGCGGCTGCTGCTGCTGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 72 bp GAGCAGAAAGAGGAGACCTCAAGGCTATCTTCTCGCTaGCCGAGGGAGAAGGCTTGCAGGGCACAGGCAAGA +
Preference number: 3 (lower is better)
Translates to: EQKEETSRLSSR*PREKACRAQAR
Trigger: TCTTGCCTGTGCCCTGCAAGCCTTCTCCCTCGGCCAGCGAGAAGATAGCCTTGAGGTCTCCTCTTTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CAA 90 bp GCCCCTCGGGCACGATCACCACGCTGTCATCAGAGTCACTTTCCAAGGAGATCTGCACACACGTCGCTGTaGGCATTGCTATCCCCTTTC +
Preference number: 3 (lower is better)
Translates to: APRARSPRCHQSHFPRRSAHTSL*ALLSPF
Trigger: GAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGC...AGATCTCCTTGGAAAGTGACTCTGATGACAGCGTGGTGATCGTGCCCGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR TCA 72 bp GAGGTGGTGGCTTCTCATCATCAGGGGGACAATCGATaGAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCT +
Preference number: 3 (lower is better)
Translates to: EVVASHHQGDNR*SRPAWQLCHPA
Trigger: AGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGATGATGAGAAGCCACCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 72 bp CTTGGTCCGAACCGTGCTGTAAGGCCTCTCCTGGCCTaGAGAGAGGGAATCTCTACCGATGCTCCAGGAATT +
Preference number: 3 (lower is better)
Translates to: LGPNRAVRPLLA*REGISTDAPGI
Trigger: AATTCCTGGAGCATCGGTAGAGATTCCCTCTCTCCAGGCCAGGAGAGGCCTTACAGCACGGTTCGGACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 72 bp AAACCTGCACCCACAGCTCTAATATCGCATACACCTTaGTCCGAACCGTGCTGTAAGGCCTCTCCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: KPAPTALISHTP*SEPCCKASPGL
Trigger: CAGGCCAGGAGAGGCCTTACAGCACGGTTCGGACCAAGGTGTATGCGATATTAGAGCTGTGGGTGCAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 72 bp GTTGATATTAATAACTGTCAAATCCTCTTCCAGGGCTaGGGGTCCTCCCCCACCAGGAGTCCCTTCAGGGAC +
Preference number: 3 (lower is better)
Translates to: VDINNCQILFQG*GSSPTRSPFRD
Trigger: GTCCCTGAAGGGACTCCTGGTGGGGGAGGACCCCCAGCCCTGGAAGAGGATTTGACAGTTATTAATATCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CCA 72 bp TGCAGAAGATGGCTAGGAGTCAGGCTCTGTGGGAGGTaGTGGCTTCTCATCATCAGGGGGACAATCGATGAA +
Preference number: 3 (lower is better)
Translates to: CRRWLGVRLCGR*WLLIIRGTIDE
Trigger: TTCATCGATTGTCCCCCTGATGATGAGAAGCCACCACCTCCCACAGAGCCTGACTCCTAGCCATCTTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR-3UTR CAA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTTTACACCAATGTCAGTaGTTCCTCTCTGGATCGTCA +
Preference number: 3 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSLHQCQ*FLSGSS
Trigger: TGACGATCCAGAGAGGAACAACTGACATTGGTGTAA...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR-3UTR CAA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTGTGGGCATGTGGGTGTaGACACAGGTCCACTCACTA +
Preference number: 3 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVVGMWV*TQVHSL
Trigger: TAGTGAGTGGACCTGTGTCAACACCCACATGCCCAC...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR GCA 72 bp ATCAGAGTCACTTTCCAAGGAGATCTCCACATCAGATaGCTCCTCCTTGTCATAGTGGACAAAGGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: IRVTFQGDLHIR*LLLVIVDKGWS
Trigger: AGACCAGCCTTTGTCCACTATGACAAGGAGGAGGCATCTGATGTGGAGATCTCCTTGGAAAGTGACTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTGTGGGGCCCATGGGCTaGAGGGGAGGAACCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCVGPMG*RGGTRG
Trigger: CCCCCGGGTTCCTCCCCTGCAGCCCATGGGCCCCAC...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CCACCCCAGGGCCTTCATTCTGCACAGGAGCAGTCTCTGCTCCCTCGTACAGGGGTGGGGCCCATGGGCTaGAGGGGAGGAACCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PPQGLHSAQEQSLLPRTGVGPMG*RGGTRG
Trigger: CCCCCGGGTTCCTCCCCTGCAGCCCATGGGCCCCAC...CCCTGTACGAGGGAGCAGAGACTGCTCCTGTGCAGAATGAAGGCCCTGGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp CTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCTTTCCGGTGGGGGCATGGAGCCCACTaGGGGCATGGGGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LSAAAHTSLLALLSPFRWGHGAH*GHGARR
Trigger: CCTCCGGGCCCCATGCCCTCAGTGGGCTCCATGCCC...CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CCACCCCAGGGCCTTCATTCTGCACAGGAGCAGTCTCTGCTCCCTCGTACAGGGGAGCCCGGGCAAATGTaGGGCCGAGCGGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PPQGLHSAQEQSLLPRTGEPGQM*GRAVWG
Trigger: CCCCCAAACCGCTCGGCCCCACATTTGCCCGGGCTC...CCCTGTACGAGGGAGCAGAGACTGCTCCTGTGCAGAATGAAGGCCCTGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CAA 72 bp GGAGGAGGTCCCTCAGGACAGCCACGGCCAGCTCCATaGTGGCAGGCGGGTCCTGGGTCTTCTGAGGAATGC +
Preference number: 4 (lower is better)
Translates to: GGGPSGQPRPAP*WQAGPGSSEEC
Trigger: GCATTCCTCAGAAGACCCAGGACCCGCCTGCCACAATGGAGCTGGCCGTGGCTGTCCTGAGGGACCTCCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CAA 72 bp ACAGACACTAGGCCTGGGACAGAAAGGCCTAGGTGGTaGGCTGTGGTGGGAGGTCCAGGGCGTGCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: TDTRPGTERPRW*AVVGGPGRAEG
Trigger: GCCCTCGGCACGCCCTGGACCTCCCACCACAGCCAACCACCTAGGCCTTTCTGTCCCAGGCCTAGTGTCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp CAGGCGGCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGCCGCAATAGGCACATaGGCCCGGGCAAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: QAADQDPKAQEPASTREDAAIGT*ARANVG
Trigger: CCCCACATTTGCCCGGGCTCATGTGCCTATTGCGGC...ATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATGGGCATGGAGCCCACTaGGGGCATGGGGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHGHGAH*GHGARR
Trigger: CCTCCGGGCCCCATGCCCTCAGTGGGCTCCATGCCC...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATCGGGCCCGAGCTCACTaGCGAGAGACCCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHRARAH*RETPGP
Trigger: GGGACCGGGGGTCTCTCGGCAGTGAGCTCGGGCCCG...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCCCCTCGGGCACGATCACCACGCTGTCATCAGAGTCACTTTCCAAGGAGATCTCGGGCCCGAGCTCACTaGCGAGAGACCCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: APRARSPRCHQSHFPRRSRARAH*RETPGP
Trigger: GGGACCGGGGGTCTCTCGGCAGTGAGCTCGGGCCCG...AGATCTCCTTGGAAAGTGACTCTGATGACAGCGTGGTGATCGTGCCCGAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp GCTGTTGGCATTGCTATCCCCTTTCCGGTGGCTTGGCGGGGCCATAGCTTCCCCTGGGGCCGAGCGGTTTaGGGGATGCACCGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: AVGIAIPFPVAWRGHSFPWGRAV*GMHRSN
Trigger: GTTGCTCCGGTGCATCCCCCAAACCGCTCGGCCCCA...GGGGAAGCTATGGCCCCGCCAAGCCACCGGAAAGGGGATAGCAATGCCAACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CCACCCCAGGGCCTTCATTCTGCACAGGAGCAGTCTCTGCTCCCTCGTACAGGGCCCTTTCCGGTGGCTTaGCGGGGCCATAGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PPQGLHSAQEQSLLPRTGPFPVA*RGHSFP
Trigger: GGGGAAGCTATGGCCCCGCCAAGCCACCGGAAAGGG...CCCTGTACGAGGGAGCAGAGACTGCTCCTGTGCAGAATGAAGGCCCTGGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGGGCCCTGAAGGGCGATaGGGCCTCAGGAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: QDPKAQEPASTREDECRQGPEGR*GLRRGN
Trigger: GTTCCCCCTCCTGAGGCCCCATCGCCCTTCAGGGCC...CTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp GCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCATGGGGCCCGGAGGATaGAACGGTGGGGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: AEASECSRTHVAVGIAIPMGPGG*NGGALK
Trigger: CTTCAGGGCCCCACCGTTCCATCCTCCGGGCCCCAT...GGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGGGTGGTTGGCTGTGGTaGGAGGTCCAGGGCGTGCCG +
Preference number: 4 (lower is better)
Translates to: QDPKAQEPASTREDECRQGGWLW*EVQGVP
Trigger: CGGCACGCCCTGGACCTCCCACCACAGCCAACCACC...CTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CAA 72 bp CTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTaGGCATTGCTATCCCCTTTCCGGTGGCTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LRPLSAAAHTSL*ALLSPFRWLGG
Trigger: CCCGCCAAGCCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp ATCAGGGGGACAATCGATGAAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCTCGGGTGGTGTGGCACCTaGGGGTGGTGGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: IRGTIDEVGQHGSCVILLGWCGT*GWWGWQ
Trigger: CTGCCACCCCCACCACCCTCAGGTGCCACACCACCC...GAGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTAGCCCAGCAGACACTTaGGCTTCTGGCTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCSPADT*ASGWGP
Trigger: GGGTCCCCAGCCAGAAGCTCAAGTGTCTGCTGGGCT...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCCCGCCCACCGACCCATaGAGCCGCAATAGGCACATG +
Preference number: 4 (lower is better)
Translates to: ADQDPKAQEPASTREDECPPTDP*SRNRHM
Trigger: CATGTGCCTATTGCGGCTGCATGGGTCGGTGGGCGG...GCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCTTTCCGGTGGCGGAGGATGGAACGGTaGGGCCCTGAAGGGCGATGG +
Preference number: 4 (lower is better)
Translates to: LSAAAHTSLLALLSPFRWRRMER*GPEGRW
Trigger: CCATCGCCCTTCAGGGCCCCACCGTTCCATCCTCCG...CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTCTAGGTGGTTGGCTGTaGTGGGAGGTCCAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCLGGWL*WEVQGV
Trigger: CACGCCCTGGACCTCCCACCACAGCCAACCACCTAG...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GCTGTTGGCATTGCTATCCCCTTTCCGGTGGCTTGGCGGGGCCATAGCTTCCCCCTAGGTGGTTGGCTGTaGTGGGAGGTCCAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: AVGIAIPFPVAWRGHSFPLGGWL*WEVQGV
Trigger: CACGCCCTGGACCTCCCACCACAGCCAACCACCTAG...GGGGAAGCTATGGCCCCGCCAAGCCACCGGAAAGGGGATAGCAATGCCAACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp GCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCAGGGGAGGCTGTTGGTaGCCCAGTGGGGGCTATAGG +
Preference number: 4 (lower is better)
Translates to: AEASECSRTHVAVGIAIPRGGCW*PSGGYR
Trigger: CCTATAGCCCCCACTGGGCCACCAACAGCCTCCCCT...GGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTAGGGACCAACTGGGGTaGAGGGAGCGTCACAGGACC +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCRDQLG*RERHRT
Trigger: GGTCCTGTGACGCTCCCTCCACCCCAGTTGGTCCCT...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CCACCCCAGGGCCTTCATTCTGCACAGGAGCAGTCTCTGCTCCCTCGTACAGGGAGGGACCAACTGGGGTaGAGGGAGCGTCACAGGACC +
Preference number: 4 (lower is better)
Translates to: PPQGLHSAQEQSLLPRTGRDQLG*RERHRT
Trigger: GGTCCTGTGACGCTCCCTCCACCCCAGTTGGTCCCT...CCCTGTACGAGGGAGCAGAGACTGCTCCTGTGCAGAATGAAGGCCCTGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp AAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGCAGGTCCAAGGCCTCAATCCTCTTCCAGGGCTaGGGGTCCTCCCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: KSRLPHARMSADSRSKASILFQG*GSSPTR
Trigger: CCTGGTGGGGGAGGACCCCCAGCCCTGGAAGAGGAT...TGAGGCCTTGGACCTGCTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATCCAGAGGCTCCTCCCTaGAGCATTCCCGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHPEAPP*SIPAEA
Trigger: GGCCTCGGCGGGAATGCTTCAGGGAGGAGCCTCTGG...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCTGCAGGCAGCTGGGCTaGATATCGGAGGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: AEASECSRTHVAVGIAIPCRQLG*ISEEVP
Trigger: AGGGACCTCCTCCGATATGCAGCCCAGCTGCCTGCA...GGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp GCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCTCGTGTACGGGGAGCTaGCTAGGACCTCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: ADQDPKAQEPASTREDECSCTGS*LGPHPA
Trigger: AGCAGGGTGAGGTCCTAGGCAGCTCCCCGTACACGA...GCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp GCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCCTATCCCCTTTCCGGTaGCTTGGCGGGGCCATAGCT +
Preference number: 4 (lower is better)
Translates to: AEASECSRTHVAVGIAIPLSPFR*LGGAIA
Trigger: AGCTATGGCCCCGCCAAGCCACCGGAAAGGGGATAG...GGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTCGGAGGATGGAACGGTaGGGCCCTGAAGGGCGATGG +
Preference number: 4 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACRRMER*GPEGRW
Trigger: CCATCGCCCTTCAGGGCCCCACCGTTCCATCCTCCG...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCTTTCCGGTGGAGGAGGGGAGGCTGTTaGTGGCCCAGTGGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: LSAAAHTSLLALLSPFRWRRGGC*WPSGGY
Trigger: ATAGCCCCCACTGGGCCACCAACAGCCTCCCCTCCT...CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575329.5
3UTR CAA 72 bp CCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATaGCTATCCCCTTTCCGGTGGCTTGGCGGGGCCATA +
Preference number: 4 (lower is better)
Translates to: PLSAAAHTSLLA*LSPFRWLGGAI
Trigger: TATGGCCCCGCCAAGCCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp CTGGGCTGCATATCGGAGGAGGTCCCTCAGGACAGCCACGGCCAGCTCCATTGTAGGCCAGCTTGCCTTTaGGAGAACCACAAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LGCISEEVPQDSHGQLHCRPACL*ENHKPE
Trigger: CTCGGGCTTGTGGTTCTCTCAAAGGCAAGCTGGCCT...ACAATGGAGCTGGCCGTGGCTGTCCTGAGGGACCTCCTCCGATATGCAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp GCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCTTCCACACGCGAGGATaGGTGCAGACAGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AEASECSRTHVAVGIAIPFHTRG*VQTAGP
Trigger: TGGACCTGCTGTCTGCACTCATCCTCGCGTGTGGAA...GGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp CTAATATCGCATACACCTTGGTCCGAACCGTGCTGTAAGGCCTCTCCTGGCCTGCCAGAGGCTCCTCCCTaGAGCATTCCCGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LISHTPWSEPCCKASPGLPEAPP*SIPAEA
Trigger: GGCCTCGGCGGGAATGCTTCAGGGAGGAGCCTCTGG...CAGGCCAGGAGAGGCCTTACAGCACGGTTCGGACCAAGGTGTATGCGATATTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp TCCAGGATTTCCTGCACAGGGACGGACACGGGAGCTCCAAACTCAGAGCTGAGCCCTGCTGTACACCCATaGCCAGGGGGAGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: SRISCTGTDTGAPNSELSPAVHP*PGGGPG
Trigger: ACCTGGTCCTCCCCCTGGTCATGGGTGTACAGCAGG...GCTCAGCTCTGAGTTTGGAGCTCCCGTGTCCGTCCCTGTGCAGGAAATCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp AAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGCAGGTCCAAGGCCTCAGATGGGGTCCTCATTTaGGCCTGCCCGGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: KSRLPHARMSADSRSKASDGVLI*ACPVVL
Trigger: GAGAACCACCGGGCAGGCTCAAATGAGGACCCCATC...TGAGGCCTTGGACCTGCTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp ATCAGGGGGACAATCGATGAAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCTCCCCACTCAGAACGGCTaGCGCCATCTTCCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: IRGTIDEVGQHGSCVILLPTQNG*RHLPPG
Trigger: ACCCGGGGGAAGATGGCGGCAGCCGTTCTGAGTGGG...GAGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTCCGCCCACCGACCCATaGAGCCGCAATAGGCACATG +
Preference number: 4 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACPPTDP*SRNRHM
Trigger: CATGTGCCTATTGCGGCTGCATGGGTCGGTGGGCGG...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCGATGTCCCGGAACAGTaGAGGCAGCTGGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: AEASECSRTHVAVGIAIPDVPEQ*RQLGCI
Trigger: TATGCAGCCCAGCTGCCTGCACTGTTCCGGGACATC...GGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp CTGGGCTGCATATCGGAGGAGGTCCCTCAGGACAGCCACGGCCAGCTCCATTGTAGACTGTGTAGCTCCTaGTCCCAGCTCTCGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LGCISEEVPQDSHGQLHCRLCSS*SQLSVC
Trigger: GCACACCGAGAGCTGGGAGCAGGAGCTACACAGTCT...ACAATGGAGCTGGCCGTGGCTGTCCTGAGGGACCTCCTCCGATATGCAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATGCCCCCAGCAGGGTGTaGAGTGAGGCCAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHAPSRV*SEASRL
Trigger: CAGTCTGCTGGCCTCACTGCACACCCTGCTGGGGGC...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCCGTCGCTGTTGGCATTaGTATCCCCTTTCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: AEASECSRTHVAVGIAIPRRCWH*YPLSGG
Trigger: GCCACCGGAAAGGGGATAGCAATGCCAACAGCGACG...GGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp CTGGGCTGCATATCGGAGGAGGTCCCTCAGGACAGCCACGGCCAGCTCCATTGTCCTAGGACCTCACCCTaGTGTACACCCATGACCAGG +
Preference number: 4 (lower is better)
Translates to: LGCISEEVPQDSHGQLHCPRTSP*CTPMTR
Trigger: CCTGGTCATGGGTGTACAGCAGGGTGAGGTCCTAGG...ACAATGGAGCTGGCCGTGGCTGTCCTGAGGGACCTCCTCCGATATGCAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTAACAGTGCAGGCAGCTaGGCTGCATATCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCNSAGS*AAYRRR
Trigger: CCTCCTCCGATATGCAGCCCAGCTGCCTGCACTGTT...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCAGAAGGCCAGGGAGGTaGTTCATGGAGATGTCCCGG +
Preference number: 4 (lower is better)
Translates to: AEASECSRTHVAVGIAIPRRPGR*FMEMSR
Trigger: CCGGGACATCTCCATGAACCACCTCCCTGGCCTTCT...GGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTAGGCCTCTCCTGGCCTaGAGAGAGGGAATCTCTACC +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCRPLLA*REGIST
Trigger: GGTAGAGATTCCCTCTCTCCAGGCCAGGAGAGGCCT...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTCTTAAGGGCATCAGCTaGCGGGGAGATGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCLKGIS*RGDVAE
Trigger: CTCAGCGACATCTCCCCGCCAGCTGATGCCCTTAAG...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATATGGGGCCCGGAGGATaGAACGGTGGGGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHMGPGG*NGGALK
Trigger: CTTCAGGGCCCCACCGTTCCATCCTCCGGGCCCCAT...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTAGCCCACTGAGGGCATaGGGCCCGGAGGATGGAACG +
Preference number: 4 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLSPLRA*GPEDGT
Trigger: CGTTCCATCCTCCGGGCCCCATGCCCTCAGTGGGCT...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp AAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGCAGGTCCAAGGCCTCACCTTCAGGGACCAACTaGGGTGGAGGGAGCGTCACA +
Preference number: 4 (lower is better)
Translates to: KSRLPHARMSADSRSKASPSGTN*GGGSVT
Trigger: TGTGACGCTCCCTCCACCCCAGTTGGTCCCTGAAGG...TGAGGCCTTGGACCTGCTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTTCTTCAACAAGCTCCTaGGGAGGGGGCCCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACSSTSS*GGGPAA
Trigger: TGCGGCAGGGCCCCCTCCCCAGGAGCTTGTTGAAGA...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGCCAACTGTTGGAGCTaGGGGCTCAAGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACANCWS*GLKAST
Trigger: GGTGGATGCCTTGAGCCCTCAGCTCCAACAGTTGGC...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp GCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCGGCATCACCATCTTCTaGGGACAGCAGCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: ADQDPKAQEPASTREDECGITIF*GQQHLH
Trigger: GTGGAGATGCTGCTGTCCTCAGAAGATGGTGATGCC...GCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp GCTGTTGGCATTGCTATCCCCTTTCCGGTGGCTTGGCGGGGCCATAGCTTCCCCGGGTCCTGGGTCTTCTaGGGAATGCCACGGTTAATG +
Preference number: 4 (lower is better)
Translates to: AVGIAIPFPVAWRGHSFPGSWVF*GMPRLM
Trigger: CATTAACCGTGGCATTCCTCAGAAGACCCAGGACCC...GGGGAAGCTATGGCCCCGCCAAGCCACCGGAAAGGGGATAGCAATGCCAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACGAGCGGTTTGGGGGATaGACCGGAGCAACGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHERFGG*TGATAD
Trigger: GTCTGCCGTTGCTCCGGTGCATCCCCCAAACCGCTC...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp CTAATATCGCATACACCTTGGTCCGAACCGTGCTGTAAGGCCTCTCCTGGCCTGGCCCCCAGCAGGGTGTaGAGTGAGGCCAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: LISHTPWSEPCCKASPGLAPSRV*SEASRL
Trigger: CAGTCTGCTGGCCTCACTGCACACCCTGCTGGGGGC...CAGGCCAGGAGAGGCCTTACAGCACGGTTCGGACCAAGGTGTATGCGATATTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATGCTGAGGCCTCTGAGTaGAGCCGCACACACGTCGCT +
Preference number: 4 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHAEASE*SRTHVA
Trigger: AGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTGCTGAGGCCTCTGAGTaGAGCCGCACACACGTCGCT +
Preference number: 4 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLAEASE*SRTHVA
Trigger: AGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTTTCTACCTCCCCTCCTaGTGTGCCAAACTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCFYLPS*CAKLQV
Trigger: GACCTGGAGTTTGGCACAGCAGGAGGGGAGGTAGAA...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CCACCCCAGGGCCTTCATTCTGCACAGGAGCAGTCTCTGCTCCCTCGTACAGGGCTCCATCTCTTCTTCTaGAGGTGTCTCTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PPQGLHSAQEQSLLPRTGLHLFF*RCLWWG
Trigger: CCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAG...CCCTGTACGAGGGAGCAGAGACTGCTCCTGTGCAGAATGAAGGCCCTGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp CAGGCGGCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGCAGCTGTGTCATCCTaGTCCTTTTCCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: QAADQDPKAQEPASTREDAAVSS*SFSWRA
Trigger: AGCTCTCCAGGAAAAGGAGCAGGATGACACAGCTGC...ATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGCCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATGGGGCTGAGCACGCATaGGTGTGGGCATGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHGAEHA*VWACGC
Trigger: ACACCCACATGCCCACACGCATGCGTGCTCAGCCCC...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGGCTGGAATAGCTCTGTaGGGCTCTCCCCTACCAGCA +
Preference number: 4 (lower is better)
Translates to: QDPKAQEPASTREDECRQAGIAL*GSPLPA
Trigger: TGCTGGTAGGGGAGAGCCCCACAGAGCTATTCCAGC...CTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CAGGCGGCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATAACCTCTGCCGAAGCTaGAGAAGGACATGGGCATCA +
Preference number: 4 (lower is better)
Translates to: QAADQDPKAQEPASTREDNLCRS*RRTWAS
Trigger: TGATGCCCATGTCCTTCTCCAGCTTCGGCAGAGGTT...ATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGCCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTCTATCCCCTTTCCGGTaGCTTGGCGGGGCCATAGCT +
Preference number: 4 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACLSPFR*LGGAIA
Trigger: AGCTATGGCCCCGCCAAGCCACCGGAAAGGGGATAG...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCTTTCCGGTGGAAAGGCCTAGGTGGTTaGCTGTGGTGGGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSAAAHTSLLALLSPFRWKGLGG*LWWEVQ
Trigger: CTGGACCTCCCACCACAGCCAACCACCTAGGCCTTT...CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCTTTCCGGTGGTGCAGGTGTCTCTGGTaGGGGCTGCACCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: LSAAAHTSLLALLSPFRWCRCLW*GLHLVT
Trigger: AGTGACAAGGTGCAGCCCCCACCAGAGACACCTGCA...CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCTTTCCGGTGGTTCTGCAGGTGTCTCTaGTGGGGGCTGCACCTTGTC +
Preference number: 4 (lower is better)
Translates to: LSAAAHTSLLALLSPFRWFCRCL*WGLHLV
Trigger: GACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAA...CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTGTGGGGTGCAGAAGATaGCTAGGAGTCAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCVGCRR*LGVRLC
Trigger: ACAGAGCCTGACTCCTAGCCATCTTCTGCACCCCAC...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR CAA 72 bp CCTGGAGAGAGGGAATCTCTACCGATGCTCCAGGAATaGAGGACCTGGGGAAGCAGGCGGCCGATCAGGATC +
Preference number: 4 (lower is better)
Translates to: PGERESLPMLQE*RTWGSRRPIRI
Trigger: GATCCTGATCGGCCGCCTGCTTCCCCAGGTCCTCAATTCCTGGAGCATCGGTAGAGATTCCCTCTCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTGCCAACTGTTGGAGCTaGGGGCTCAAGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLANCWS*GLKAST
Trigger: GGTGGATGCCTTGAGCCCTCAGCTCCAACAGTTGGC...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp GCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCCAAGACACACAGTGCTaGTGGAATAGCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ADQDPKAQEPASTREDECQDTQC*WNSSVG
Trigger: CCCCACAGAGCTATTCCAGCAGCACTGTGTGTCTTG...GCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp CAGGCGGCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATAGCCAAGACACACAGTaGTGCTGGAATAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: QAADQDPKAQEPASTREDSQDTQ*CWNSSV
Trigger: CACAGAGCTATTCCAGCAGCACTGTGTGTCTTGGCT...ATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGCCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTAGTCCCGAAAACCTCTaGCGAAGCTGGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCSPENL*RSWRRT
Trigger: TGTCCTTCTCCAGCTTCGGCAGAGGTTTTCGGGACT...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCTGAGGCCTCTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCAGTCCCGAAAACCTCTaGCGAAGCTGGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: AEASECSRTHVAVGIAIPSPENL*RSWRRT
Trigger: TGTCCTTCTCCAGCTTCGGCAGAGGTTTTCGGGACT...GGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAGAGGCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGTTCGGGTTCTGGCTaGACCTTTGGGGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACGSGSG*TFGGDS
Trigger: TGAGTCTCCCCCAAAGGTGCAGCCAGAACCCGAACC...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACGTCTCTGGTGGGGGCTaGACCTTGTCACTCCCATCC +
Preference number: 4 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHVSGGG*TLSLPS
Trigger: GGATGGGAGTGACAAGGTGCAGCCCCCACCAGAGAC...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCTTTCCGGTGGCAGGGAGGTGGTTCATaGAGATGTCCCGGAACAGTG +
Preference number: 4 (lower is better)
Translates to: LSAAAHTSLLALLSPFRWQGGGS*RCPGTV
Trigger: CACTGTTCCGGGACATCTCCATGAACCACCTCCCTG...CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp TCCAGGATTTCCTGCACAGGGACGGACACGGGAGCTCCAAACTCAGAGCTGAGCTCCAAGGCCTCAAGGTaGATAGAGGGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRISCTGTDTGAPNSELSSKASR*IEGSSS
Trigger: GCTGCTGCTGCCCTCTATCCACCTTGAGGCCTTGGA...GCTCAGCTCTGAGTTTGGAGCTCCCGTGTCCGTCCCTGTGCAGGAAATCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTCACACACGTCGCTGTTaGCATTGCTATCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCHTRRC*HCYPLS
Trigger: GGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTG...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATCCTTCAGGGACCAACTaGGGTGGAGGGAGCGTCACA +
Preference number: 4 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHPSGTN*GGGSVT
Trigger: TGTGACGCTCCCTCCACCCCAGTTGGTCCCTGAAGG...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTTTCTGCAGGTGTCTCTaGTGGGGGCTGCACCTTGTC +
Preference number: 4 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACFCRCL*WGLHLV
Trigger: GACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAA...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATTTCCACACGCGAGGATaGGTGCAGACAGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHFHTRG*VQTAGP
Trigger: TGGACCTGCTGTCTGCACTCATCCTCGCGTGTGGAA...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTTCATGCAGTCTCCTGTaGGTCTCCTCCTTGATGAGA +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCSCSLL*VSSLMR
Trigger: TCTCATCAAGGAGGAGACTCACAGGAGACTGCATGA...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATCAGGAAGGCCTGGGGTaGGCTTATCAAACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHQEGLG*AYQTPA
Trigger: GGCAGGAGTTTGATAAGCTCACCCCAGGCCTTCCTG...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTAAGGCAGGTGGACCATaGGCTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACKAGGP*AQEFKT
Trigger: GGTCTTGAACTCCTGAGCTCATGGTCCACCTGCCTT...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp TCCAGGATTTCCTGCACAGGGACGGACACGGGAGCTCCAAACTCAGAGCTGAGCTCCCAGCTCTCGGTGTaGTTCAGGCCTTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SRISCTGTDTGAPNSELSSQLSV*FRPWEK
Trigger: CTTTTCCCAAGGCCTGAAGCACACCGAGAGCTGGGA...GCTCAGCTCTGAGTTTGGAGCTCCCGTGTCCGTCCCTGTGCAGGAAATCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp AAGACACTGGGTGGGAAATATCCACACCTCAAGAGTGAGCAGGAAGGCCTGGGGGTCTCTGGTGGGGGCTaGACCTTGTCACTCCCATCC +
Preference number: 4 (lower is better)
Translates to: KTLGGKYPHLKSEQEGLGVSGGG*TLSLPS
Trigger: GGATGGGAGTGACAAGGTGCAGCCCCCACCAGAGAC...CCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGATATTTCCCACCCAGTGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTAACAGTGCAGGCAGCTaGGCTGCATATCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLNSAGS*AAYRRR
Trigger: CCTCCTCCGATATGCAGCCCAGCTGCCTGCACTGTT...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACAGGCCTCTCCTGGCCTaGAGAGAGGGAATCTCTACC +
Preference number: 4 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHRPLLA*REGIST
Trigger: GGTAGAGATTCCCTCTCTCCAGGCCAGGAGAGGCCT...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTCTTAAGGGCATCAGCTaGCGGGGAGATGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLLKGIS*RGDVAE
Trigger: CTCAGCGACATCTCCCCGCCAGCTGATGCCCTTAAG...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp ATCAGGGGGACAATCGATGAAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCTCAGGCTATCTTCTCGCTaGCCGAGGGAGAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: IRGTIDEVGQHGSCVILLRLSSR*PREKAC
Trigger: GCAAGCCTTCTCCCTCGGCCAGCGAGAAGATAGCCT...GAGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTAGGCCCTGAAGGGCGATaGGGCCTCAGGAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLGPEGR*GLRRGN
Trigger: GTTCCCCCTCCTGAGGCCCCATCGCCCTTCAGGGCC...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTCTCTCCACCTCTCCCTaGGAGGGGAGCGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSLSTSP*EGSASG
Trigger: CCCTGAAGCGCTCCCCTCCCAGGGAGAGGTGGAGAG...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACCTCTTCCAACAGGGTTaGGGGAGCAGAGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHLFQQG*GSRGLF
Trigger: GAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAG...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp TCCAGGATTTCCTGCACAGGGACGGACACGGGAGCTCCAAACTCAGAGCTGAGCCATTCCTTCCAATGCTaGCTGCTCACACTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SRISCTGTDTGAPNSELSHSFQC*LLTLWP
Trigger: AGGCCAGAGTGTGAGCAGTCAGCATTGGAAGGAATG...GCTCAGCTCTGAGTTTGGAGCTCCCGTGTCCGTCCCTGTGCAGGAAATCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp CAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGCGGTTAATGTCAGTCTaGCCATCCAAGCCACTACCT +
Preference number: 4 (lower is better)
Translates to: QDPKAQEPASTREDECRQRLMSV*PSKPLP
Trigger: AGGTAGTGGCTTGGATGGTCAGACTGACATTAACCG...CTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTCCTTCCAATGCTGACTaGTCACACTCTGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLPSNAD*SHSGLR
Trigger: CCTCAGGCCAGAGTGTGAGCAGTCAGCATTGGAAGG...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp GCCCCTCGGGCACGATCACCACGCTGTCATCAGAGTCACTTTCCAAGGAGATCTCCAGGGCCTTCATTCTaGACAGGAGCAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: APRARSPRCHQSHFPRRSPGPSF*TGAVSA
Trigger: AGCAGAGACTGCTCCTGTGCAGAATGAAGGCCCTGG...AGATCTCCTTGGAAAGTGACTCTGATGACAGCGTGGTGATCGTGCCCGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp TCCAGGATTTCCTGCACAGGGACGGACACGGGAGCTCCAAACTCAGAGCTGAGCGAGGCCCCACAAACCTaGACCCACAGCTCTAATATC +
Preference number: 4 (lower is better)
Translates to: SRISCTGTDTGAPNSELSEAPQT*THSSNI
Trigger: GATATTAGAGCTGTGGGTGCAGGTTTGTGGGGCCTC...GCTCAGCTCTGAGTTTGGAGCTCCCGTGTCCGTCCCTGTGCAGGAAATCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp CTGGGCTGCATATCGGAGGAGGTCCCTCAGGACAGCCACGGCCAGCTCCATTGTGATCTCCACATCAGATaGCTCCTCCTTGTCATAGTG +
Preference number: 4 (lower is better)
Translates to: LGCISEEVPQDSHGQLHCDLHIR*LLLVIV
Trigger: CACTATGACAAGGAGGAGGCATCTGATGTGGAGATC...ACAATGGAGCTGGCCGTGGCTGTCCTGAGGGACCTCCTCCGATATGCAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTAGAGCTGAAAGGTTCTaGGCCCCGCCCACCGACCCA +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITRAERF*APPTDP
Trigger: TGGGTCGGTGGGCGGGGCCCAGAACCTTTCAGCTCT...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp ATCAGGGGGACAATCGATGAAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCTCGACACACAGTGCTGCTaGAATAGCTCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: IRGTIDEVGQHGSCVILLDTQCC*NSSVGL
Trigger: GAGCCCCACAGAGCTATTCCAGCAGCACTGTGTGTC...GAGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CTGAGTGCAGCCGCACACACGTCGCTGTTGGCATTGCTATCCCCTTTCCGGTGGAGCTGGAGAAGGACATaGGCATCACCATCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LSAAAHTSLLALLSPFRWSWRRT*ASPSSE
Trigger: CTCAGAAGATGGTGATGCCCATGTCCTTCTCCAGCT...CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGCGGCTGCACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CTGGGCTGCATATCGGAGGAGGTCCCTCAGGACAGCCACGGCCAGCTCCATTGTATATCGCATACACCTTaGTCCGAACCGTGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: LGCISEEVPQDSHGQLHCISHTP*SEPCCK
Trigger: CTTACAGCACGGTTCGGACCAAGGTGTATGCGATAT...ACAATGGAGCTGGCCGTGGCTGTCCTGAGGGACCTCCTCCGATATGCAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTACCCTTTCCGGTGGCTTaGCGGGGCCATAGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLPFPVA*RGHSFP
Trigger: GGGGAAGCTATGGCCCCGCCAAGCCACCGGAAAGGG...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp ATCAGGGGGACAATCGATGAAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCTCACAGAAAGGCCTAGGTaGTTGGCTGTGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: IRGTIDEVGQHGSCVILLTERPR*LAVVGG
Trigger: ACCTCCCACCACAGCCAACCACCTAGGCCTTTCTGT...GAGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTAGGAGGGGAGGCTGTTaGTGGCCCAGTGGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITRRGGC*WPSGGY
Trigger: ATAGCCCCCACTGGGCCACCAACAGCCTCCCCTCCT...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTAATCCTCTTCCAGGGCTaGGGGTCCTCCCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLILFQG*GSSPTR
Trigger: CCTGGTGGGGGAGGACCCCCAGCCCTGGAAGAGGAT...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp AAGACACTGGGTGGGAAATATCCACACCTCAAGAGTGAGCAGGAAGGCCTGGGGAGGCAGGGTTGGGGGTaGAGGTGCACCTTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: KTLGGKYPHLKSEQEGLGRQGWG*RCTFFY
Trigger: GTAGAAGAAGGTGCACCTCCACCCCCAACCCTGCCT...CCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGATATTTCCCACCCAGTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACTCCTGCTCCTTTTCCTaGAGAGCTTCGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHSCSFS*RASASV
Trigger: GACAGAGGCCGAAGCTCTCCAGGAAAAGGAGCAGGA...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp GCCCCTCGGGCACGATCACCACGCTGTCATCAGAGTCACTTTCCAAGGAGATCTAGGCTCTGTGGGAGGTaGTGGCTTCTCATCATCAGG +
Preference number: 4 (lower is better)
Translates to: APRARSPRCHQSHFPRRSRLCGR*WLLIIR
Trigger: CCTGATGATGAGAAGCCACCACCTCCCACAGAGCCT...AGATCTCCTTGGAAAGTGACTCTGATGACAGCGTGGTGATCGTGCCCGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACGTGGGGTGCAGAAGATaGCTAGGAGTCAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHVGCRR*LGVRLC
Trigger: ACAGAGCCTGACTCCTAGCCATCTTCTGCACCCCAC...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTAGCTATGGAGACATCTaGGGAATACTATGGACACCC +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCSYGDI*GILWTP
Trigger: GGGTGTCCATAGTATTCCCCAGATGTCTCCATAGCT...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTGGGTGGTGTGGCACCTaGGGGTGGTGGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVGWCGT*GWWGWQ
Trigger: CTGCCACCCCCACCACCCTCAGGTGCCACACCACCC...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATGACCCCGTTCGAGGTTaGAGCAAACCAGAAACACTC +
Preference number: 4 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHDPVRG*SKPETL
Trigger: GAGTGTTTCTGGTTTGCTGCAACCTCGAACGGGGTC...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp AAGACACTGGGTGGGAAATATCCACACCTCAAGAGTGAGCAGGAAGGCCTGGGGAGCAATCACTCAGCCTaGCCTTTCAGACCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: KTLGGKYPHLKSEQEGLGSNHSA*PFRPRG
Trigger: GCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCT...CCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGATATTTCCCACCCAGTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTGTGTGCTTCAGGCCTTaGGAAAAGCCAGCCCCTAAA +
Preference number: 4 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLVCFRP*EKPAPK
Trigger: TTTAGGGGCTGGCTTTTCCCAAGGCCTGAAGCACAC...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp ATCAGGGGGACAATCGATGAAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCTCCACACACGTCGCTGTTaGCATTGCTATCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: IRGTIDEVGQHGSCVILLHTRRC*HCYPLS
Trigger: GGAAAGGGGATAGCAATGCCAACAGCGACGTGTGTG...GAGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTAGGCCAGCTTGCCTTTaGGAGAACCACAAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITRPACL*ENHKPE
Trigger: CTCGGGCTTGTGGTTCTCTCAAAGGCAAGCTGGCCT...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp GCCCCTCGGGCACGATCACCACGCTGTCATCAGAGTCACTTTCCAAGGAGATCTTACTGTAACACCTGCTaGATGCTCCGAAGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: APRARSPRCHQSHFPRRSYCNTC*MLRSQD
Trigger: GTCTTGGCTTCGGAGCATTCAGCAGGTGTTACAGTA...AGATCTCCTTGGAAAGTGACTCTGATGACAGCGTGGTGATCGTGCCCGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTGAGGTTGCAGTGAGCTaGGACCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITEVAVS*DHATAL
Trigger: GAGTGCAGTGGCATGGTCTCAGCTCACTGCAACCTC...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTAGGCAGAGGTTGCAGTaGGCTGAGACCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSRQRLQ*AETMPL
Trigger: CAGTGGCATGGTCTCAGCTCACTGCAACCTCTGCCT...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp AAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGCAGGTCCAAGGCCTCAGATGGAACTGAGACGTaGATTACTGAGACTCACCAA +
Preference number: 4 (lower is better)
Translates to: KSRLPHARMSADSRSKASDGTET*ITETHQ
Trigger: TTGGTGAGTCTCAGTAATGCACGTCTCAGTTCCATC...TGAGGCCTTGGACCTGCTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTATGCAGGCAGCTGGGCTaGATATCGGAGGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLCRQLG*ISEEVP
Trigger: AGGGACCTCCTCCGATATGCAGCCCAGCTGCCTGCA...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTGATGTCCCGGAACAGTaGAGGCAGCTGGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITDVPEQ*RQLGCI
Trigger: TATGCAGCCCAGCTGCCTGCACTGTTCCGGGACATC...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTAGACTGTGTAGCTCCTaGTCCCAGCTCTCGGTGTGC +
Preference number: 4 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSRLCSS*SQLSVC
Trigger: GCACACCGAGAGCTGGGAGCAGGAGCTACACAGTCT...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CAAGCTAATATTCTTGCTACTGACGCTGAGGGTCCGGCAGATGAAATCCAGGATCACAGGAGCAGTCTCTaGTCCCTCGTACAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: QANILATDAEGPADEIQDHRSSL*SLVQGP
Trigger: GGGGCCCTGTACGAGGGAGCAGAGACTGCTCCTGTG...ATCCTGGATTTCATCTGCCGGACCCTCAGCGTCAGTAGCAAGAATATTAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTCGTCGCTGTTGGCATTaGTATCCCCTTTCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITRRCWH*YPLSGG
Trigger: GCCACCGGAAAGGGGATAGCAATGCCAACAGCGACG...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTCCTAGGACCTCACCCTaGTGTACACCCATGACCAGG +
Preference number: 4 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSPRTSP*CTPMTR
Trigger: CCTGGTCATGGGTGTACAGCAGGGTGAGGTCCTAGG...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTCCCTACACACAATTCTaGACGTTTAGCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACPYTQF*TFSIQP
Trigger: TGGCTGGATGCTAAACGTGCAGAATTGTGTGTAGGG...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTGAGCCCGGGCAAATGTaGGGCCGAGCGGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVEPGQM*GRAVWG
Trigger: CCCCCAAACCGCTCGGCCCCACATTTGCCCGGGCTC...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp AAGACACTGGGTGGGAAATATCCACACCTCAAGAGTGAGCAGGAAGGCCTGGGGGTGTGCTTCAGGCCTTaGGAAAAGCCAGCCCCTAAA +
Preference number: 4 (lower is better)
Translates to: KTLGGKYPHLKSEQEGLGVCFRP*EKPAPK
Trigger: TTTAGGGGCTGGCTTTTCCCAAGGCCTGAAGCACAC...CCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGATATTTCCCACCCAGTGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTTCCAAGGCCTCAAGGTaGATAGAGGGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSSKASR*IEGSSS
Trigger: GCTGCTGCTGCCCTCTATCCACCTTGAGGCCTTGGA...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTAAAGGCCTAGGTGGTTaGCTGTGGTGGGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSKGLGG*LWWEVQ
Trigger: CTGGACCTCCCACCACAGCCAACCACCTAGGCCTTT...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTTTTGAGCCTGCCCGGTaGTTCTCAGGGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITFEPAR*FSGPGR
Trigger: TCTTCCTGGCCCTGAGAACCACCGGGCAGGCTCAAA...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CAAGCTAATATTCTTGCTACTGACGCTGAGGGTCCGGCAGATGAAATCCAGGATTCTTCAACAAGCTCCTaGGGAGGGGGCCCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: QANILATDAEGPADEIQDSSTSS*GGGPAA
Trigger: TGCGGCAGGGCCCCCTCCCCAGGAGCTTGTTGAAGA...ATCCTGGATTTCATCTGCCGGACCCTCAGCGTCAGTAGCAAGAATATTAGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTTCAGTTGTTCCTCTCTaGATCGTCAAAAAGAGGACA +
Preference number: 4 (lower is better)
Translates to: PALSDQGAEHACVWACGCSVVPL*IVKKRT
Trigger: TGTCCTCTTTTTGACGATCCAGAGAGGAACAACTGA...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
3UTR CAA 72 bp AGCCGCAGGGGACCATCTCCATGCAAGCTAATATTCTaGCTACTGACGCTGAGGGTCCGGCAGATGAAATCC +
Preference number: 4 (lower is better)
Translates to: SRRGPSPCKLIF*LLTLRVRQMKS
Trigger: GGATTTCATCTGCCGGACCCTCAGCGTCAGTAGCAAGAATATTAGCTTGCATGGAGATGGTCCCCTGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp CAAGCTAATATTCTTGCTACTGACGCTGAGGGTCCGGCAGATGAAATCCAGGATCAGGGGGACAATCGATaGAGTCGGCCAGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: QANILATDAEGPADEIQDQGDNR*SRPAWQ
Trigger: CTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTG...ATCCTGGATTTCATCTGCCGGACCCTCAGCGTCAGTAGCAAGAATATTAGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTACCTGCCAGGGAGCTGTaGGGGGAACTGTCATTAGGA +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLPAREL*GELSLG
Trigger: TCCTAATGACAGTTCCCCTCACAGCTCCCTGGCAGG...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTCCCACTCAGAACGGCTaGCGCCATCTTCCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: KIIHVKESGMGRATVSTAPTQNG*RHLPPG
Trigger: ACCCGGGGGAAGATGGCGGCAGCCGTTCTGAGTGGG...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTCCTTCCAATGCTGACTaGTCACACTCTGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSPSNAD*SHSGLR
Trigger: CCTCAGGCCAGAGTGTGAGCAGTCAGCATTGGAAGG...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTTCCCAGCTCTCGGTGTaGTTCAGGCCTTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSSQLSV*FRPWEK
Trigger: CTTTTCCCAAGGCCTGAAGCACACCGAGAGCTGGGA...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTTGGGGCCGAGCGGTTTaGGGGATGCACCGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: KIIHVKESGMGRATVSTAWGRAV*GMHRSN
Trigger: GTTGCTCCGGTGCATCCCCCAAACCGCTCGGCCCCA...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTGACACACAGTGCTGCTaGAATAGCTCTGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITDTQCC*NSSVGL
Trigger: GAGCCCCACAGAGCTATTCCAGCAGCACTGTGTGTC...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTCAGGGAGGTGGTTCATaGAGATGTCCCGGAACAGTG +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITQGGGS*RCPGTV
Trigger: CACTGTTCCGGGACATCTCCATGAACCACCTCCCTG...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTAAGGCTATCTTCTCGCTaGCCGAGGGAGAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLRLSSR*PREKAC
Trigger: GCAAGCCTTCTCCCTCGGCCAGCGAGAAGATAGCCT...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTAGCCCACTGAGGGCATaGGGCCCGGAGGATGGAACG +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVSPLRA*GPEDGT
Trigger: CGTTCCATCCTCCGGGCCCCATGCCCTCAGTGGGCT...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTACTCTTCCAACAGGGTTaGGGGAGCAGAGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLLFQQG*GSRGLF
Trigger: GAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAG...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTATGCAGGTGTCTCTGGTaGGGGCTGCACCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLCRCLW*GLHLVT
Trigger: AGTGACAAGGTGCAGCCCCCACCAGAGACACCTGCA...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACGCAGAAAAGAGGGTGTaGAGACACGGATACTGTAAC +
Preference number: 4 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHAEKRV*RHGYCN
Trigger: GTTACAGTATCCGTGTCTCCACACCCTCTTTTCTGC...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTAAGACACTTGAGCTTCTaGCTGGGGACCCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLRHLSF*LGTQVW
Trigger: CCACACCTGGGTCCCCAGCCAGAAGCTCAAGTGTCT...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTCCTGCTGTACACCCATaGCCAGGGGGAGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: KIIHVKESGMGRATVSTAPAVHP*PGGGPG
Trigger: ACCTGGTCCTCCCCCTGGTCATGGGTGTACAGCAGG...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp AAGACACTGGGTGGGAAATATCCACACCTCAAGAGTGAGCAGGAAGGCCTGGGGATACTATGGACACCCTaGAAAGCCCAGCAGACACTT +
Preference number: 4 (lower is better)
Translates to: KTLGGKYPHLKSEQEGLGILWTP*KAQQTL
Trigger: AAGTGTCTGCTGGGCTTTTCAGGGTGTCCATAGTAT...CCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGATATTTCCCACCCAGTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTTTCAGACCAAGGGGCTaGGCACGCATGCGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVFRPRG*ARMRVG
Trigger: GCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAA...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTCACAGGAGCAGTCTCTaGTCCCTCGTACAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVHRSSL*SLVQGP
Trigger: GGGGCCCTGTACGAGGGAGCAGAGACTGCTCCTGTG...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTAAATCCAGGATTTCCTaGACAGGGACGGACACGGGA +
Preference number: 4 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSKSRIS*TGTDTG
Trigger: TCCCGTGTCCGTCCCTGTGCAGGAAATCCTGGATTT...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTGAGGCCCCACAAACCTaGACCCACAGCTCTAATATC +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITEAPQT*THSSNI
Trigger: GATATTAGAGCTGTGGGTGCAGGTTTGTGGGGCCTC...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAGGTGGTTGGCTGTGGTaGGAGGTCCAGGGCGTGCCG +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKGGWLW*EVQGVP
Trigger: CGGCACGCCCTGGACCTCCCACCACAGCCAACCACC...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CAAGCTAATATTCTTGCTACTGACGCTGAGGGTCCGGCAGATGAAATCCAGGATTTTGAGCCTGCCCGGTaGTTCTCAGGGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QANILATDAEGPADEIQDFEPAR*FSGPGR
Trigger: TCTTCCTGGCCCTGAGAACCACCGGGCAGGCTCAAA...ATCCTGGATTTCATCTGCCGGACCCTCAGCGTCAGTAGCAAGAATATTAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTAGGGGAGGCTGTTGGTaGCCCAGTGGGGGCTATAGG +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVRGGCW*PSGGYR
Trigger: CCTATAGCCCCCACTGGGCCACCAACAGCCTCCCCT...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTAGAAAAGACACTGGGTaGGAAATATCCACACCTCAA +
Preference number: 4 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACRKDTG*EISTPQ
Trigger: TTGAGGTGTGGATATTTCCCACCCAGTGTCTTTTCT...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp AAGACACTGGGTGGGAAATATCCACACCTCAAGAGTGAGCAGGAAGGCCTGGGGTTAAAGAATCTGGGATaGGAAGGGCCACGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: KTLGGKYPHLKSEQEGLGLKNLG*EGPRCL
Trigger: TAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAA...CCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGATATTTCCCACCCAGTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTCAGGGGGACAATCGATaGAGTCGGCCAGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: KIIHVKESGMGRATVSTAQGDNR*SRPAWQ
Trigger: CTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTG...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTTCCACACCTCAAGAGTaGGCAGGAAGGCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVSTPQE*AGRPGV
Trigger: CACCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGA...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTACAAGACACACAGTGCTaGTGGAATAGCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLQDTQC*WNSSVG
Trigger: CCCCACAGAGCTATTCCAGCAGCACTGTGTGTCTTG...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp ATCAGGGGGACAATCGATGAAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCTCAGGGGACCATCTCCATaGAAGCTAATATTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: IRGTIDEVGQHGSCVILLRGPSP*KLIFLL
Trigger: TAGCAAGAATATTAGCTTGCATGGAGATGGTCCCCT...GAGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTTCGTGTACGGGGAGCTaGCTAGGACCTCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: KIIHVKESGMGRATVSTASCTGS*LGPHPA
Trigger: AGCAGGGTGAGGTCCTAGGCAGCTCCCCGTACACGA...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTAGCAGCTGTGTCATCCTaGTCCTTTTCCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLAAVSS*SFSWRA
Trigger: AGCTCTCCAGGAAAAGGAGCAGGATGACACAGCTGC...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTAGCTGGAGAAGGACATaGGCATCACCATCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITSWRRT*ASPSSE
Trigger: CTCAGAAGATGGTGATGCCCATGTCCTTCTCCAGCT...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAGCCGCAATAGGCACATaGGCCCGGGCAAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKAAIGT*ARANVG
Trigger: CCCCACATTTGCCCGGGCTCATGTGCCTATTGCGGC...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp AAGACACTGGGTGGGAAATATCCACACCTCAAGAGTGAGCAGGAAGGCCTGGGGTTTCCCAGAATTCAATaGCTAAACTGCTCCACACCT +
Preference number: 4 (lower is better)
Translates to: KTLGGKYPHLKSEQEGLGFPRIQ*LNCSTP
Trigger: AGGTGTGGAGCAGTTTAGTCATTGAATTCTGGGAAA...CCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGATATTTCCCACCCAGTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTACATGTTGGGAGAAATaGCTCCCTCTTCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITTCWEK*LPLLHC
Trigger: GCAATGCAGAAGAGGGAGTCATTTCTCCCAACATGT...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAGAGCGGTTTGGGGGATaGACCGGAGCAACGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKERFGG*TGATAD
Trigger: GTCTGCCGTTGCTCCGGTGCATCCCCCAAACCGCTC...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTAAGCCAAGACACACAGTaGTGCTGGAATAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLSQDTQ*CWNSSV
Trigger: CACAGAGCTATTCCAGCAGCACTGTGTGTCTTGGCT...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CAAGCTAATATTCTTGCTACTGACGCTGAGGGTCCGGCAGATGAAATCCAGGATAAATCCAGGATTTCCTaGACAGGGACGGACACGGGA +
Preference number: 4 (lower is better)
Translates to: QANILATDAEGPADEIQDKSRIS*TGTDTG
Trigger: TCCCGTGTCCGTCCCTGTGCAGGAAATCCTGGATTT...ATCCTGGATTTCATCTGCCGGACCCTCAGCGTCAGTAGCAAGAATATTAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTCTCCCTCTTCTGCATTaGGAAGGCACTTTACTTACG +
Preference number: 4 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSLPLLH*EGTLLT
Trigger: CGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAG...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTGGCATCACCATCTTCTaGGGACAGCAGCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVGITIF*GQQHLH
Trigger: GTGGAGATGCTGCTGTCCTCAGAAGATGGTGATGCC...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp CAAGCTAATATTCTTGCTACTGACGCTGAGGGTCCGGCAGATGAAATCCAGGATTCATGCAGTCTCCTGTaGGTCTCCTCCTTGATGAGA +
Preference number: 4 (lower is better)
Translates to: QANILATDAEGPADEIQDSCSLL*VSSLMR
Trigger: TCTCATCAAGGAGGAGACTCACAGGAGACTGCATGA...ATCCTGGATTTCATCTGCCGGACCCTCAGCGTCAGTAGCAAGAATATTAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR TCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAGATGGGGTCCTCATTTaGGCCTGCCCGGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKDGVLI*ACPVVL
Trigger: GAGAACCACCGGGCAGGCTCAAATGAGGACCCCATC...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTGATGGAACTGAGACGTaGATTACTGAGACTCACCAA +
Preference number: 4 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSDGTET*ITETHQ
Trigger: TTGGTGAGTCTCAGTAATGCACGTCTCAGTTCCATC...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CAAGCTAATATTCTTGCTACTGACGCTGAGGGTCCGGCAGATGAAATCCAGGATGTAACACCTGCTGAATaGTCCGAAGCCAAGACACAC +
Preference number: 4 (lower is better)
Translates to: QANILATDAEGPADEIQDVTPAE*SEAKTH
Trigger: GTGTGTCTTGGCTTCGGAGCATTCAGCAGGTGTTAC...ATCCTGGATTTCATCTGCCGGACCCTCAGCGTCAGTAGCAAGAATATTAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR GCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTCCAGGGCCTTCATTCTaGACAGGAGCAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KIIHVKESGMGRATVSTAPGPSF*TGAVSA
Trigger: AGCAGAGACTGCTCCTGTGCAGAATGAAGGCCCTGG...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTACAGAAAGGCCTAGGTaGTTGGCTGTGGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVTERPR*LAVVGG
Trigger: ACCTCCCACCACAGCCAACCACCTAGGCCTTTCTGT...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTTTCAGGTTCGGGTTCTaGCTGCACCTTTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVFRFGF*LHLWGR
Trigger: TCTCCCCCAAAGGTGCAGCCAGAACCCGAACCTGAA...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTCATTCCTTCCAATGCTaGCTGCTCACACTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVHSFQC*LLTLWP
Trigger: AGGCCAGAGTGTGAGCAGTCAGCATTGGAAGGAATG...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTCACCATCGTGCTGAGTaGTGGGACAGTCCATTACAC +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVHHRAE*WDSPLH
Trigger: GTGTAATGGACTGTCCCATCACTCAGCACGATGGTG...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTCTGACACCATCGTGCTaGGTGATGGGACAGTCCATT +
Preference number: 4 (lower is better)
Translates to: KIIHVKESGMGRATVSTALTPSC*VMGQSI
Trigger: AATGGACTGTCCCATCACTCAGCACGATGGTGTCAG...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAGCTGGAATAGCTCTGTaGGGCTCTCCCCTACCAGCA +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKAGIAL*GSPLPA
Trigger: TGCTGGTAGGGGAGAGCCCCACAGAGCTATTCCAGC...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAAGAAGGCCAGGGAGGTaGTTCATGGAGATGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKRRPGR*FMEMSR
Trigger: CCGGGACATCTCCATGAACCACCTCCCTGGCCTTCT...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTAACCTCTGCCGAAGCTaGAGAAGGACATGGGCATCA +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVNLCRS*RRTWAS
Trigger: TGATGCCCATGTCCTTCTCCAGCTTCGGCAGAGGTT...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTATTAAAGAAAAGACACTaGGACAGTCAGGTGCGGTGT +
Preference number: 4 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLLKKRH*DSQVRC
Trigger: ACACCGCACCTGACTGTCCCAGTGTCTTTTCTTTAA...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTGTAACACCTGCTGAATaGTCCGAAGCCAAGACACAC +
Preference number: 4 (lower is better)
Translates to: KIIHVKESGMGRATVSTAVTPAE*SEAKTH
Trigger: GTGTGTCTTGGCTTCGGAGCATTCAGCAGGTGTTAC...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAACTCCATCTCTTCTTCTaGAGGTGTCTCTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKLHLFF*RCLWWG
Trigger: CCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAG...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAATCCTGCTCCTTTTCCTaGAGAGCTTCGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKSCSFS*RASASV
Trigger: GACAGAGGCCGAAGCTCTCCAGGAAAAGGAGCAGGA...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAAGGCTCTGTGGGAGGTaGTGGCTTCTCATCATCAGG +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKRLCGR*WLLIIR
Trigger: CCTGATGATGAGAAGCCACCACCTCCCACAGAGCCT...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTCAAGCCCACCAATCTTaGTACCCTCTCACAGACACA +
Preference number: 4 (lower is better)
Translates to: KIIHVKESGMGRATVSTAQAHQS*YPLTDT
Trigger: TGTGTCTGTGAGAGGGTACCAAGATTGGTGGGCTTG...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR TCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAGTCTGTAACACCTGCTaGATGCTCCGAAGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKVCNTC*MLRSQD
Trigger: GTCTTGGCTTCGGAGCATTCAGCAGGTGTTACAGAC...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTGATCTCCACATCAGATaGCTCCTCCTTGTCATAGTG +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVDLHIR*LLLVIV
Trigger: CACTATGACAAGGAGGAGGCATCTGATGTGGAGATC...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAAGCTTATCAAACTCCTaGCAGGGAGCTGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKSLSNS*QGAVRG
Trigger: TCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCT...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTGACACCCTTTCATCTTaGGGTAAGGTCCAAATTTCC +
Preference number: 4 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVDTLSS*GKVQIS
Trigger: GGAAATTTGGACCTTACCCCAAGATGAAAGGGTGTC...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTAGGGGACCATCTCCATaGAAGCTAATATTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: KIIHVKESGMGRATVSTARGPSP*KLIFLL
Trigger: TAGCAAGAATATTAGCTTGCATGGAGATGGTCCCCT...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAATATCGCATACACCTTaGTCCGAACCGTGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKISHTP*SEPCCK
Trigger: CTTACAGCACGGTTCGGACCAAGGTGTATGCGATAT...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR GCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAAATGACTCCCTCTTCTaGATTGCGAAGGCACTTTAC +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKNDSLF*IAKALY
Trigger: GTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATT...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CCA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAAAAAGAGGACAGCTATaGAGACATCTGGGGAATACT +
Preference number: 4 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKKRGQL*RHLGNT
Trigger: AGTATTCCCCAGATGTCTCCATAGCTGTCCTCTTTT...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
41% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS GCA 90 bp AACACTCTCCAGCAGCAGCAGGCGGAGCCGCGGGCCCGAGCTCACTaGCGAGAGACCCCCGGTCCCGCCAGGAACCCCAGCCGCGGAGCC +
Preference number: 5 (lower is better)
Translates to: NTLQQQQAEPRARAH*RETPGPARNPSRGA
Trigger: GGCTCCGCGGCTGGGGTTCCTGGCGGGACCGGGGGTCTCTCGGCAGTGAGCTCGGGCCCGCGGCTCCGCCTGCTGCTGCTGGAGAGTGTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301396.8
ENST00000436683.6
ENST00000570823.5
ENST00000571347.1
ENST00000572293.7
ENST00000573523.5
ENST00000574876.5
ENST00000575101.1
ENST00000575329.5
CDS CCA 90 bp CTCAGAACGGCTGCCGCCATCTTCCCCCGGGTTCCAGTGGTGGCGTaGCGCGATGACGCAAACACACCGCGACGGCCGCCTACTGGGGAG +
Preference number: 5 (lower is better)
Translates to: LRTAAAIFPRVPVVA*RDDANTPRRPPTGE
Trigger: CTCCCCAGTAGGCGGCCGTCGCGGTGTGTTTGCGTCATCGCGCCACGCCACCACTGGAACCCGGGGGAAGATGGCGGCAGCCGTTCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301396.8
ENST00000436683.6
CDS CCA 90 bp GCCCACTCAGAACGGCTGCCGCCATCTTCCCCCGGGTTCCAGTGGTaGCGTGGCGCGATGACGCAAACACACCGCGACGGCCGCCTACTG +
Preference number: 5 (lower is better)
Translates to: AHSERLPPSSPGFQW*RGAMTQTHRDGRLL
Trigger: CAGTAGGCGGCCGTCGCGGTGTGTTTGCGTCATCGCGCCACGCCACCACTGGAACCCGGGGGAAGATGGCGGCAGCCGTTCTGAGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301396.8
ENST00000436683.6
CDS CCA 90 bp AGGGCCCACTCAGAACGGCTGCCGCCATCTTCCCCCGGGTTCCAGTaGTGGCGTGGCGCGATGACGCAAACACACCGCGACGGCCGCCTA +
Preference number: 5 (lower is better)
Translates to: RAHSERLPPSSPGFQ*WRGAMTQTHRDGRL
Trigger: TAGGCGGCCGTCGCGGTGTGTTTGCGTCATCGCGCCACGCCACCACTGGAACCCGGGGGAAGATGGCGGCAGCCGTTCTGAGTGGGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301396.8
ENST00000436683.6
CDS-3UTR CAA 90 bp CAGGCGGCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATCAGGAGGGGAGGCTGTaGGTGGCCCAGTGGGGGCTA +
Preference number: 5 (lower is better)
Translates to: QAADQDPKAQEPASTREDQEGRL*VAQWGL
Trigger: TAGCCCCCACTGGGCCACCAACAGCCTCCCCTCCTG...ATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGCCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS GCA 90 bp CGGTTTGGGGGATGCACCGGAGCAACGGCAGACCCCGTTCGAGGTTaGAGCAAACCAGAAACACTCTCCAGCAGCAGCAGGCGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: RFGGCTGATADPVRG*SKPETLSSSSRRSR
Trigger: GCGGCTCCGCCTGCTGCTGCTGGAGAGTGTTTCTGGTTTGCTGCAACCTCGAACGGGGTCTGCCGTTGCTCCGGTGCATCCCCCAAACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000301396.8
ENST00000436683.6
ENST00000570571.5
ENST00000570823.5
ENST00000571347.1
ENST00000572293.7
ENST00000573523.5
ENST00000574876.5
ENST00000575101.1
ENST00000575329.5
CDS-3UTR CAA 90 bp TCCAGGATTTCCTGCACAGGGACGGACACGGGAGCTCCAAACTCAGAGCTGAGCCCACGGCCAGCTCCATaGTGGCAGGCGGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SRISCTGTDTGAPNSELSPRPAP*WQAGPG
Trigger: CCCAGGACCCGCCTGCCACAATGGAGCTGGCCGTGG...GCTCAGCTCTGAGTTTGGAGCTCCCGTGTCCGTCCCTGTGCAGGAAATCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CAA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATCCACGGCCAGCTCCATaGTGGCAGGCGGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHPRPAP*WQAGPG
Trigger: CCCAGGACCCGCCTGCCACAATGGAGCTGGCCGTGG...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp CCACCCCAGGGCCTTCATTCTGCACAGGAGCAGTCTCTGCTCCCTCGTACAGGGGGTGGGGGCTGCACCTaGTCACTCCCATCCTCAGTC +
Preference number: 5 (lower is better)
Translates to: PPQGLHSAQEQSLLPRTGGGGCT*SLPSSV
Trigger: GACTGAGGATGGGAGTGACAAGGTGCAGCCCCCACC...CCCTGTACGAGGGAGCAGAGACTGCTCCTGTGCAGAATGAAGGCCCTGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS CCA 90 bp ACTCACGCGAGGATGAGTGCAGACAGCAGGTCCAAGGCCTCAAGGTaGATAGAGGGCAGCAGCAGCAGCCGCAGGGGACCATCTCCATGC +
Preference number: 5 (lower is better)
Translates to: THARMSADSRSKASR*IEGSSSSRRGPSPC
Trigger: GCATGGAGATGGTCCCCTGCGGCTGCTGCTGCTGCCCTCTATCCACCTTGAGGCCTTGGACCTGCTGTCTGCACTCATCCTCGCGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575534.1
CDS CCA 90 bp GGCGGCCGATCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACCTaGGGCAGAGAAGGAATGGTGACCCTCGTTTCTGGCACGCCCTAT +
Preference number: 5 (lower is better)
Translates to: GGRSGSQSARAGFHT*GREGMVTLVSGTPY
Trigger: ATAGGGCGTGCCAGAAACGAGGGTCACCATTCCTTCTCTGCCCCAGGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGATCGGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575534.1
CDS-3UTR CAA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACGTGGGGCCGAGCGGTTaGGGGGATGCACCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHVGPSG*GDAPEQ
Trigger: TTGCTCCGGTGCATCCCCCAAACCGCTCGGCCCCAC...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS CCA 90 bp CGGCTTCCACACCTGGGGCAGAGAAGGAATGGTGACCCTCGTTTCTaGCACGCCCTATCCCTTCACCACAGCCAGCCCAATCCCACTCAC +
Preference number: 5 (lower is better)
Translates to: RLPHLGQRRNGDPRF*HALSLHHSQPNPTH
Trigger: GTGAGTGGGATTGGGCTGGCTGTGGTGAAGGGATAGGGCGTGCCAGAAACGAGGGTCACCATTCCTTCTCTGCCCCAGGTGTGGAAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575534.1
CDS-3UTR CAA 90 bp CAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGCCGATGCTCCAGGAATaGAGGACCTGGGGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: QDPKAQEPASTREDECRQPMLQE*RTWGSR
Trigger: CCTGCTTCCCCAGGTCCTCAATTCCTGGAGCATCGG...CTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CAA 90 bp AAGACACTGGGTGGGAAATATCCACACCTCAAGAGTGAGCAGGAAGGCCTGGGGCAGGAGGGGAGGCTGTaGGTGGCCCAGTGGGGGCTA +
Preference number: 5 (lower is better)
Translates to: KTLGGKYPHLKSEQEGLGQEGRL*VAQWGL
Trigger: TAGCCCCCACTGGGCCACCAACAGCCTCCCCTCCTG...CCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGATATTTCCCACCCAGTGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp CTGGGCTGCATATCGGAGGAGGTCCCTCAGGACAGCCACGGCCAGCTCCATTGTGCACACACGTCGCTGTaGGCATTGCTATCCCCTTTC +
Preference number: 5 (lower is better)
Translates to: LGCISEEVPQDSHGQLHCAHTSL*ALLSPF
Trigger: GAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGC...ACAATGGAGCTGGCCGTGGCTGTCCTGAGGGACCTCCTCCGATATGCAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CAA 90 bp GCCCCTCGGGCACGATCACCACGCTGTCATCAGAGTCACTTTCCAAGGAGATCTGAAAGGCCTAGGTGGTaGGCTGTGGTGGGAGGTCCA +
Preference number: 5 (lower is better)
Translates to: APRARSPRCHQSHFPRRSERPRW*AVVGGP
Trigger: TGGACCTCCCACCACAGCCAACCACCTAGGCCTTTC...AGATCTCCTTGGAAAGTGACTCTGATGACAGCGTGGTGATCGTGCCCGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CAA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATGGATGGGGTCCTCATTaGAGCCTGCCCGGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHGWGPH*SLPGGS
Trigger: AGAACCACCGGGCAGGCTCAAATGAGGACCCCATCC...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp TCCCATCCTCAGTCTCCTCTTCCAACAGGGTTGGGGGAGCAGAGGGCTCTTCTTGGATGGGGTCCTCATTaGAGCCTGCCCGGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: SHPQSPLPTGLGEQRALLGWGPH*SLPGGS
Trigger: AGAACCACCGGGCAGGCTCAAATGAGGACCCCATCC...AAGAAGAGCCCTCTGCTCCCCCAACCCTGTTGGAAGAGGAGACTGAGGATGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CAA 90 bp AAGACACTGGGTGGGAAATATCCACACCTCAAGAGTGAGCAGGAAGGCCTGGGGGGTGGGGGCTGCACCTaGTCACTCCCATCCTCAGTC +
Preference number: 5 (lower is better)
Translates to: KTLGGKYPHLKSEQEGLGGGGCT*SLPSSV
Trigger: GACTGAGGATGGGAGTGACAAGGTGCAGCCCCCACC...CCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGATATTTCCCACCCAGTGTCTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTTCAAGCCCACCAATCTaGGTACCCTCTCACAGACAC +
Preference number: 5 (lower is better)
Translates to: PALSDQGAEHACVWACGCSSPPI*VPSHRH
Trigger: GTGTCTGTGAGAGGGTACCAAGATTGGTGGGCTTGA...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp CTAATATCGCATACACCTTGGTCCGAACCGTGCTGTAAGGCCTCTCCTGGCCTGCTCACAGGCCAACTGTaGGAGCTGAGGGCTCAAGGC +
Preference number: 5 (lower is better)
Translates to: LISHTPWSEPCCKASPGLLTGQL*ELRAQG
Trigger: GCCTTGAGCCCTCAGCTCCAACAGTTGGCCTGTGAG...CAGGCCAGGAGAGGCCTTACAGCACGGTTCGGACCAAGGTGTATGCGATATTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CAA 90 bp ATCAGGGGGACAATCGATGAAGTCGGCCAGCATGGCAGCTGTGTCATCCTGCTCACGTCGCTGTTGGCATaGCTATCCCCTTTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: IRGTIDEVGQHGSCVILLTSLLA*LSPFRW
Trigger: CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGT...GAGCAGGATGACACAGCTGCCATGCTGGCCGACTTCATCGATTGTCCCCCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CAA 90 bp GAGCAATCACTCAGCCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGTGGGCATGTGGGTGTaGACACAGGTCCACTCACTA +
Preference number: 5 (lower is better)
Translates to: EQSLSLPFQTKGLSTHACVGMWV*TQVHSL
Trigger: TAGTGAGTGGACCTGTGTCAACACCCACATGCCCAC...ACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGGCTGAGTGATTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATGCACACACGTCGCTGTaGGCATTGCTATCCCCTTTC +
Preference number: 5 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHAHTSL*ALLSPF
Trigger: GAAAGGGGATAGCAATGCCAACAGCGACGTGTGTGC...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp CCTGCCCTTTCAGACCAAGGGGCTGAGCACGCATGCGTGTGGGCATGTGGGTGTACTCCCTCTTCTGCATaGCGAAGGCACTTTACTTAC +
Preference number: 5 (lower is better)
Translates to: PALSDQGAEHACVWACGCTPSSA*RRHFTY
Trigger: GTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGT...ACACCCACATGCCCACACGCATGCGTGCTCAGCCCCTTGGTCTGAAAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACAGACCCCGTTCGAGGTaGCAGCAAACCAGAAACACT +
Preference number: 5 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHRPRSR*QQTRNT
Trigger: AGTGTTTCTGGTTTGCTGCAACCTCGAACGGGGTCT...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CAA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTCTCACAGGCCAACTGTaGGAGCTGAGGGCTCAAGGC +
Preference number: 5 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITLTGQL*ELRAQG
Trigger: GCCTTGAGCCCTCAGCTCCAACAGTTGGCCTGTGAG...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp GGACCCAGGTGTGGCAAAAGGCAGAAGCAGCAGTCGCTATCTAAGGACATAACTCCGATGCTCCAGGAATaGAGGACCTGGGGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: GPRCGKRQKQQSLSKDITPMLQE*RTWGSR
Trigger: CCTGCTTCCCCAGGTCCTCAATTCCTGGAGCATCGG...AGTTATGTCCTTAGATAGCGACTGCTGCTTCTGCCTTTTGCCACACCTGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp GCCACCTCCTCAAAGGGCTCTTCAGGATACATGTTGGGAGAAATGACTCCCTCTGAAAGGCCTAGGTGGTaGGCTGTGGTGGGAGGTCCA +
Preference number: 5 (lower is better)
Translates to: ATSSKGSSGYMLGEMTPSERPRW*AVVGGP
Trigger: TGGACCTCCCACCACAGCCAACCACCTAGGCCTTTC...AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGAGCCCTTTGAGGAGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp AAGAGCCGGCTTCCACACGCGAGGATGAGTGCAGACAGCAGGTCCAAGGCCTCAAAAAATGAGGCCAGCTaGCCTTTGAGAGAACCACAA +
Preference number: 5 (lower is better)
Translates to: KSRLPHARMSADSRSKASKNEAS*PLREPQ
Trigger: TTGTGGTTCTCTCAAAGGCAAGCTGGCCTCATTTTT...TGAGGCCTTGGACCTGCTGTCTGCACTCATCCTCGCGTGTGGAAGCCGGCTCTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CAA 90 bp AAGACACTGGGTGGGAAATATCCACACCTCAAGAGTGAGCAGGAAGGCCTGGGGCCCTCAAACCGAGTTTaGATGGAACTGAGACGTGCA +
Preference number: 5 (lower is better)
Translates to: KTLGGKYPHLKSEQEGLGPSNRV*MELRRA
Trigger: TGCACGTCTCAGTTCCATCAAAACTCGGTTTGAGGG...CCCCAGGCCTTCCTGCTCACTCTTGAGGTGTGGATATTTCCCACCCAGTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp CTGTCTCCATCTCTTCTTCTGCAGGTGTCTCTGGTGGGGGCTGCACCTTGTCACTGCAAGCTAATATTCTaGCTACTGACGCTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LSPSLLLQVSLVGAAPCHCKLIF*LLTLRV
Trigger: GACCCTCAGCGTCAGTAGCAAGAATATTAGCTTGCA...GTGACAAGGTGCAGCCCCCACCAGAGACACCTGCAGAAGAAGAGATGGAGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575329.5
CDS-3UTR CAA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAGTGGGGCCGAGCGGTTaGGGGGATGCACCGGAGCAA +
Preference number: 5 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKVGPSG*GDAPEQ
Trigger: TTGCTCCGGTGCATCCCCCAAACCGCTCGGCCCCAC...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp GCCTGGGGTGAGCTTATCAAACTCCTGCCAGGGAGCTGTGAGGGGAACTGTCATAAAAATGAGGCCAGCTaGCCTTTGAGAGAACCACAA +
Preference number: 5 (lower is better)
Translates to: AWGELIKLLPGSCEGNCHKNEAS*PLREPQ
Trigger: TTGTGGTTCTCTCAAAGGCAAGCTGGCCTCATTTTT...ATGACAGTTCCCCTCACAGCTCCCTGGCAGGAGTTTGATAAGCTCACCCCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS GCA 90 bp ATGACTCAGCTGATCCCCAAATTCACCCTCCCCCAAGGAAGCATTTaGTACACTCTGACACTGTGCTCCTGTGTCACGACACATAGGAAG +
Preference number: 5 (lower is better)
Translates to: MTQLIPKFTLPQGSI*YTLTLCSCVTTHRK
Trigger: CTTCCTATGTGTCGTGACACAGGAGCACAGTGTCAGAGTGTAGCAAATGCTTCCTTGGGGGAGGGTGAATTTGGGGATCAGCTGAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573523.5
CDS-3UTR CAA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTGAGGCCAGCTTGCCTTaGAGAGAACCACAAGCCCGA +
Preference number: 5 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVEASLP*REPQAR
Trigger: TCGGGCTTGTGGTTCTCTCAAAGGCAAGCTGGCCTC...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS TCA 90 bp GGAACTGAGACGTGCATTACTGAGACTCACCAATGCCCCAAGAGCTaGAAGGTTCTCTATATGTCTGGGCAGCACCTAATAGGAGACATC +
Preference number: 5 (lower is better)
Translates to: GTETCITETHQCPKS*KVLYMSGQHLIGDI
Trigger: GATGTCTCCTATTAGGTGCTGCCCAGACATATAGAGAACCTTTCAGCTCTTGGGGCATTGGTGAGTCTCAGTAATGCACGTCTCAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570387.5
CDS-3UTR CAA 90 bp CATCTCTCGGTTCATCCTCACACGTCCATCCCAGCAAGGCCTAGAATAGGATTATGCAAGCTAATATTCTaGCTACTGACGCTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: HLSVHPHTSIPARPRIGLCKLIF*LLTLRV
Trigger: GACCCTCAGCGTCAGTAGCAAGAATATTAGCTTGCA...TAATCCTATTCTAGGCCTTGCTGGGATGGACGTGTGAGGATGAACCGAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS TCA 90 bp TGCTACACTCTGACACTGTGCTCCTGTGTCACGACACATAGGAAGTaGTGTTATTTGGACAAAAGTAGGAAGCTCTCTGGGACGACTCCA +
Preference number: 5 (lower is better)
Translates to: CYTLTLCSCVTTHRK*CYLDKSRKLSGTTP
Trigger: TGGAGTCGTCCCAGAGAGCTTCCTACTTTTGTCCAAATAACATCACTTCCTATGTGTCGTGACACAGGAGCACAGTGTCAGAGTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573523.5
CDS-3UTR CAA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAACGTCGCTGTTGGCATaGCTATCCCCTTTCCGGTGG +
Preference number: 5 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKTSLLA*LSPFRW
Trigger: CCACCGGAAAGGGGATAGCAATGCCAACAGCGACGT...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS GCA 90 bp AGAGTCATGTTAAGTGGGCGGAGGCTAGACTTCAGAGAAAGTGACTaGTCTTTTATTCTCACTAGGCTACAGCAAGACTTCATCCCCAGA +
Preference number: 5 (lower is better)
Translates to: RVMLSGRRLDFRESD*SFILTRLQQDFIPR
Trigger: TCTGGGGATGAAGTCTTGCTGTAGCCTAGTGAGAATAAAAGAGCAGTCACTTTCTCTGAAGTCTAGCCTCCGCCCACTTAACATGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571170.1
ENST00000571347.1
CDS-3UTR CAA 90 bp CTGCATTGCGAAGGCACTTTACTTACGTTCATGATTCAACTGACTGAGCAAAAAAGACCCCGTTCGAGGTaGCAGCAAACCAGAAACACT +
Preference number: 5 (lower is better)
Translates to: LHCEGTLLTFMIQLTEQKRPRSR*QQTRNT
Trigger: AGTGTTTCTGGTTTGCTGCAACCTCGAACGGGGTCT...TTTTTGCTCAGTCAGTTGAATCATGAACGTAAGTAAAGTGCCTTCGCAATGCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS TCA 90 bp GGAATAGGACATCTGGGAGCTGGAAAAGGTAGGGTTCAAATCAAGTaGGCTCACAAAAGGAATGTAACTCTCCACACTCTTGGGAATAGA +
Preference number: 5 (lower is better)
Translates to: GIGHLGAGKGRVQIK*AHKRNVTLHTLGNR
Trigger: TCTATTCCCAAGAGTGTGGAGAGTTACATTCCTTTTGTGAGCTCACTTGATTTGAACCCTACCTTTTCCAGCTCCCAGATGTCCTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571347.1
CDS CCA 90 bp TTATTCTCACTAGGCTACAGCAAGACTTCATCCCCAGATCCACTGTaGTTTCCAACTCCTGAAATACTTGGAATGAGGTGGAAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: LFSLGYSKTSSPDPL*FPTPEILGMRWKKQ
Trigger: TTGCTTCTTCCACCTCATTCCAAGTATTTCAGGAGTTGGAAACCACAGTGGATCTGGGGATGAAGTCTTGCTGTAGCCTAGTGAGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571170.1
ENST00000571347.1
CDS-3UTR CAA 90 bp ATGTTGGGAGAAATGACTCCCTCTTCTGCATTGCGAAGGCACTTTACTTACGTTTTACACCAATGTCAGTaGTTCCTCTCTGGATCGTCA +
Preference number: 5 (lower is better)
Translates to: MLGEMTPSSALRRHFTYVLHQCQ*FLSGSS
Trigger: TGACGATCCAGAGAGGAACAACTGACATTGGTGTAA...AACGTAAGTAAAGTGCCTTCGCAATGCAGAAGAGGGAGTCATTTCTCCCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS-3UTR CAA 90 bp AAGATAATTCATGTTAAAGAATCTGGGATGGGAAGGGCCACGGTGTCTACAGCTTCTTCAGGATACATGTaGGGAGAAATGACTCCCTCT +
Preference number: 5 (lower is better)
Translates to: KIIHVKESGMGRATVSTASSGYM*GEMTPS
Trigger: AGAGGGAGTCATTTCTCCCAACATGTATCCTGAAGA...AGCTGTAGACACCGTGGCCCTTCCCATCCCAGATTCTTTAACATGAATTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572293.7
CDS TCA 90 bp AAAAGGAATGTAACTCTCCACACTCTTGGGAATAGAGAGAGGTCTTaGATCCTGGGGACGGTGACAATGAAAGCAAAGATGTACATATGC +
Preference number: 5 (lower is better)
Translates to: KRNVTLHTLGNRERS*ILGTVTMKAKMYIC
Trigger: GCATATGTACATCTTTGCTTTCATTGTCACCGTCCCCAGGATTCAAGACCTCTCTCTATTCCCAAGAGTGTGGAGAGTTACATTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571347.1
CDS GCA 72 bp CAGCAGCAGCAGGCGGAGCCGCGGGCCCGAGCTCACTaGCGAGAGACCCCCGGTCCCGCCAGGAACCCCAGC +
Preference number: 6 (lower is better)
Translates to: QQQQAEPRARAH*RETPGPARNPS
Trigger: GCTGGGGTTCCTGGCGGGACCGGGGGTCTCTCGGCAGTGAGCTCGGGCCCGCGGCTCCGCCTGCTGCTGCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301396.8
ENST00000436683.6
ENST00000570823.5
ENST00000571347.1
ENST00000572293.7
ENST00000573523.5
ENST00000574876.5
ENST00000575101.1
ENST00000575329.5
CDS GCA 72 bp AGCCGCGGAGCCCGCAGAGGGCCCACTCAGAACGGCTaGCGCCATCTTCCCCCGGGTTCCAGTGGTGGCGTG +
Preference number: 6 (lower is better)
Translates to: SRGARRGPTQNG*RHLPPGSSGGV
Trigger: CACGCCACCACTGGAACCCGGGGGAAGATGGCGGCAGCCGTTCTGAGTGGGCCCTCTGCGGGCTCCGCGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301396.8
ENST00000436683.6
CDS CCA 72 bp TCAAGCTGGGAAGGAGCATGCGCGGAGAGAGCAGCCTaGGCGCCGAGGCAGCGGGGTGCTCGGTTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: SSWEGACAERAA*APRQRGARFPE
Trigger: CTCCGGGAACCGAGCACCCCGCTGCCTCGGCGCCCAGGCTGCTCTCTCCGCGCATGCTCCTTCCCAGCTTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301396.8
ENST00000436683.6
CDS CCA 72 bp GCTGCCGCCATCTTCCCCCGGGTTCCAGTGGTGGCGTaGCGCGATGACGCAAACACACCGCGACGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: AAAIFPRVPVVA*RDDANTPRRPP
Trigger: AGGCGGCCGTCGCGGTGTGTTTGCGTCATCGCGCCACGCCACCACTGGAACCCGGGGGAAGATGGCGGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301396.8
ENST00000436683.6
CDS TCA 72 bp CCCCGCCCACCGACCCATGCAGCCGCAATAGGCACATaGGCCCGGGCAAATGTGGGGCCGAGCGGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: PRPPTHAAAIGT*ARANVGPSGLG
Trigger: CCCCAAACCGCTCGGCCCCACATTTGCCCGGGCTCATGTGCCTATTGCGGCTGCATGGGTCGGTGGGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000301396.8
ENST00000436683.6
ENST00000570571.5
ENST00000570823.5
ENST00000571347.1
ENST00000572293.7
ENST00000573523.5
ENST00000574876.5
ENST00000575101.1
ENST00000575329.5
CDS CCA 72 bp GAACGGCTGCCGCCATCTTCCCCCGGGTTCCAGTGGTaGCGTGGCGCGATGACGCAAACACACCGCGACGGC +
Preference number: 6 (lower is better)
Translates to: ERLPPSSPGFQW*RGAMTQTHRDG
Trigger: GCCGTCGCGGTGTGTTTGCGTCATCGCGCCACGCCACCACTGGAACCCGGGGGAAGATGGCGGCAGCCGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301396.8
ENST00000436683.6
CDS TCA 72 bp CATCTTCCCCCGGGTTCCAGTGGTGGCGTGGCGCGATaGCGCAAACACACCGCGACGGCCGCCTACTGGGGA +
Preference number: 6 (lower is better)
Translates to: HLPPGSSGGVAR*RKHTATAAYWG
Trigger: TCCCCAGTAGGCGGCCGTCGCGGTGTGTTTGCGTCATCGCGCCACGCCACCACTGGAACCCGGGGGAAGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301396.8
ENST00000436683.6
CDS CCA 72 bp TCAGAACGGCTGCCGCCATCTTCCCCCGGGTTCCAGTaGTGGCGTGGCGCGATGACGCAAACACACCGCGAC +
Preference number: 6 (lower is better)
Translates to: SERLPPSSPGFQ*WRGAMTQTHRD
Trigger: GTCGCGGTGTGTTTGCGTCATCGCGCCACGCCACCACTGGAACCCGGGGGAAGATGGCGGCAGCCGTTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301396.8
ENST00000436683.6
CDS CAA 72 bp GGAGGAGGTCCCTCAGGACAGCCACGGCCAGCTCCATaGTGGCAGGCGGGTCCTGGGTCTGTAACACCTGCT +
Preference number: 6 (lower is better)
Translates to: GGGPSGQPRPAP*WQAGPGSVTPA
Trigger: AGCAGGTGTTACAGACCCAGGACCCGCCTGCCACAATGGAGCTGGCCGTGGCTGTCCTGAGGGACCTCCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301396.8
ENST00000570387.5
ENST00000570571.5
ENST00000571170.1
ENST00000572293.7
ENST00000573523.5
ENST00000574876.5
CDS CAA 90 bp GCGGTTTGGGGGATGCACCGGAGCAACGGCAGACCCCGTTCGAGGTaGCAGCAAACCAGAAACACTCTCCAGCAGCAGCAGGCGGAGCCG +
Preference number: 6 (lower is better)
Translates to: AVWGMHRSNGRPRSR*QQTRNTLQQQQAEP
Trigger: CGGCTCCGCCTGCTGCTGCTGGAGAGTGTTTCTGGTTTGCTGCAACCTCGAACGGGGTCTGCCGTTGCTCCGGTGCATCCCCCAAACCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000301396.8
ENST00000436683.6
ENST00000570571.5
ENST00000570823.5
ENST00000571347.1
ENST00000572293.7
ENST00000573523.5
ENST00000574876.5
ENST00000575101.1
ENST00000575329.5
CDS CCA 72 bp GGAGGTCCCTCAGGACAGCCACGGCCAGCTCCATTGTaGCAGGCGGGTCCTGGGTCTGTAACACCTGCTGAA +
Preference number: 6 (lower is better)
Translates to: GGPSGQPRPAPL*QAGPGSVTPAE
Trigger: TTCAGCAGGTGTTACAGACCCAGGACCCGCCTGCCACAATGGAGCTGGCCGTGGCTGTCCTGAGGGACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301396.8
ENST00000570387.5
ENST00000570571.5
ENST00000571170.1
ENST00000572293.7
ENST00000573523.5
ENST00000574876.5
CDS GCA 72 bp AGAGCTGAAAGGTTCTGGGCCCCGCCCACCGACCCATaGAGCCGCAATAGGCACATGAGCCCGGGCAAATGT +
Preference number: 6 (lower is better)
Translates to: RAERFWAPPTDP*SRNRHMSPGKC
Trigger: ACATTTGCCCGGGCTCATGTGCCTATTGCGGCTGCATGGGTCGGTGGGCGGGGCCCAGAACCTTTCAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301396.8
ENST00000436683.6
ENST00000570571.5
ENST00000570823.5
ENST00000571347.1
ENST00000572293.7
ENST00000573523.5
ENST00000574876.5
ENST00000575101.1
ENST00000575329.5
CDS TCA 72 bp GGGAGCTGCCTAGGACCTCACCCTGCTGTACACCCATaGCCAGGGGGAGGACCAGGTCATGCAGTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: GSCLGPHPAVHP*PGGGPGHAVSE
Trigger: TTCAGAGACTGCATGACCTGGTCCTCCCCCTGGTCATGGGTGTACAGCAGGGTGAGGTCCTAGGCAGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573242.1
CDS TCA 72 bp TTCACCACAGCCAGCCCAATCCCACTCACGCGAGGATaGGTGCAGACAGCAGGTCCAAGGCCTCAAGGTGGA +
Preference number: 6 (lower is better)
Translates to: FTTASPIPLTRG*VQTAGPRPQGG
Trigger: TCCACCTTGAGGCCTTGGACCTGCTGTCTGCACTCATCCTCGCGTGAGTGGGATTGGGCTGGCTGTGGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575534.1
CDS CCA 72 bp CACCTGGGGCAGAGAAGGAATGGTGACCCTCGTTTCTaGCACGCCCTATCCCTTCACCACAGCCAGCCCAAT +
Preference number: 6 (lower is better)
Translates to: HLGQRRNGDPRF*HALSLHHSQPN
Trigger: ATTGGGCTGGCTGTGGTGAAGGGATAGGGCGTGCCAGAAACGAGGGTCACCATTCCTTCTCTGCCCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575534.1
CDS CCA 72 bp TCAGGATCCCAAAGCGCAAGAGCCGGCTTCCACACCTaGGGCAGAGAAGGAATGGTGACCCTCGTTTCTGGC +
Preference number: 6 (lower is better)
Translates to: SGSQSARAGFHT*GREGMVTLVSG
Trigger: GCCAGAAACGAGGGTCACCATTCCTTCTCTGCCCCAGGTGTGGAAGCCGGCTCTTGCGCTTTGGGATCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575534.1
CDS GCA 72 bp GTGGAGGTGCACCTTCTTCTACCTCCCCTCCTGCTGTaGCAAACTCCAGGTCTTCCACCTCTTCCAGTTCTT +
Preference number: 6 (lower is better)
Translates to: VEVHLLLPPLLL*QTPGLPPLPVL
Trigger: AAGAACTGGAAGAGGTGGAAGACCTGGAGTTTGGCACAGCAGGAGGGGAGGTAGAAGAAGGTGCACCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301396.8
ENST00000572293.7
ENST00000573523.5
ENST00000574876.5
CDS CCA 72 bp CACTGTTTGGGGAGACTCAGGTCCCCAGTACTTTCCTaGTTGCCTGGTATCCTGAGCAAGGGCTCTGAAGAG +
Preference number: 6 (lower is better)
Translates to: HCLGRLRSPVLS*LPGILSKGSEE
Trigger: CTCTTCAGAGCCCTTGCTCAGGATACCAGGCAACCAGGAAAGTACTGGGGACCTGAGTCTCCCCAAACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573506.1
ENST00000573523.5
CDS TCA 72 bp AAGAGGGTGTGGAGACACGGATACTGTAACACCTGCTaGATGCTCCGAAGCCAAGACACACAGTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: KRVWRHGYCNTC*MLRSQDTQCCW
Trigger: CCAGCAGCACTGTGTGTCTTGGCTTCGGAGCATTCAGCAGGTGTTACAGTATCCGTGTCTCCACACCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436683.6
ENST00000575329.5
CDS CAA 72 bp TGTTTGGGGAGACTCAGGTCCCCAGTACTTTCCTGGTaGCCTGGTATCCTGAGCAAGGGCTCTGAAGAGATG +
Preference number: 6 (lower is better)
Translates to: CLGRLRSPVLSW*PGILSKGSEEM
Trigger: CATCTCTTCAGAGCCCTTGCTCAGGATACCAGGCAACCAGGAAAGTACTGGGGACCTGAGTCTCCCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573506.1
ENST00000573523.5
CDS CAA 72 bp GCTGATCCCCAAATTCACCCTCCCCCAAGGAAGCATTaGCTACACTCTGACACTGTGCTCCTGTGTCACGAC +
Preference number: 6 (lower is better)
Translates to: ADPQIHPPPRKH*LHSDTVLLCHD
Trigger: GTCGTGACACAGGAGCACAGTGTCAGAGTGTAGCAAATGCTTCCTTGGGGGAGGGTGAATTTGGGGATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573523.5
CDS GCA 72 bp GGGTGTGGAGACACGGATACTGTAACACCTGCTGAATaGTCCGAAGCCAAGACACACAGTGCTGCTGGAATA +
Preference number: 6 (lower is better)
Translates to: GCGDTDTVTPAE*SEAKTHSAAGI
Trigger: TATTCCAGCAGCACTGTGTGTCTTGGCTTCGGAGCATTCAGCAGGTGTTACAGTATCCGTGTCTCCACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436683.6
ENST00000575329.5
CDS GCA 72 bp AAAATGAGGCCAGCTTGCCCTGTAACACCTGCTGAATaGTCCGAAGCCAAGACACACAGTGCTGCTGGAATA +
Preference number: 6 (lower is better)
Translates to: KMRPACPVTPAE*SEAKTHSAAGI
Trigger: TATTCCAGCAGCACTGTGTGTCTTGGCTTCGGAGCATTCAGCAGGTGTTACAGGGCAAGCTGGCCTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575101.1
CDS TCA 72 bp AATTCACCCTCCCCCAAGGAAGCATTTGCTACACTCTaGCACTGTGCTCCTGTGTCACGACACATAGGAAGT +
Preference number: 6 (lower is better)
Translates to: NSPSPKEAFATL*HCAPVSRHIGS
Trigger: ACTTCCTATGTGTCGTGACACAGGAGCACAGTGTCAGAGTGTAGCAAATGCTTCCTTGGGGGAGGGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573523.5
CDS GCA 72 bp CTGGGGACGGTGACAATGAAAGCAAAGATGTACATATaGCCACTTCCTAAGGGAACACGCCCCTGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: LGTVTMKAKMYI*PLPKGTRPWRK
Trigger: TTTTCTCCAGGGGCGTGTTCCCTTAGGAAGTGGGCATATGTACATCTTTGCTTTCATTGTCACCGTCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571347.1
CDS CCA 72 bp CTAGGCTACAGCAAGACTTCATCCCCAGATCCACTGTaGTTTCCAACTCCTGAAATACTTGGAATGAGGTGG +
Preference number: 6 (lower is better)
Translates to: LGYSKTSSPDPL*FPTPEILGMRW
Trigger: CCACCTCATTCCAAGTATTTCAGGAGTTGGAAACCACAGTGGATCTGGGGATGAAGTCTTGCTGTAGCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571170.1
ENST00000571347.1
CDS TCA 72 bp CTGACACTGTGCTCCTGTGTCACGACACATAGGAAGTaGTGTTATTTGGACAAAAGTAGGAAGCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: LTLCSCVTTHRK*CYLDKSRKLSG
Trigger: CCCAGAGAGCTTCCTACTTTTGTCCAAATAACATCACTTCCTATGTGTCGTGACACAGGAGCACAGTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573523.5
CDS TCA 72 bp ACTTTCCTGGTTGCCTGGTATCCTGAGCAAGGGCTCTaGAGAGATGACAAATCCCACTTACAATATTCTTGC +
Preference number: 6 (lower is better)
Translates to: TFLVAWYPEQGL*RDDKSHLQYSC
Trigger: GCAAGAATATTGTAAGTGGGATTTGTCATCTCTTCAGAGCCCTTGCTCAGGATACCAGGCAACCAGGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573506.1
ENST00000573523.5
CDS GCA 72 bp TTAAGTGGGCGGAGGCTAGACTTCAGAGAAAGTGACTaGTCTTTTATTCTCACTAGGCTACAGCAAGACTTC +
Preference number: 6 (lower is better)
Translates to: LSGRRLDFRESD*SFILTRLQQDF
Trigger: GAAGTCTTGCTGTAGCCTAGTGAGAATAAAAGAGCAGTCACTTTCTCTGAAGTCTAGCCTCCGCCCACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571170.1
ENST00000571347.1
CDS TCA 72 bp GACTTCATCCCCAGATCCACTGTGGTTTCCAACTCCTaGAATACTTGGAATGAGGTGGAAGAAGCAAAGAAA +
Preference number: 6 (lower is better)
Translates to: DFIPRSTVVSNS*NTWNEVEEAKK
Trigger: TTTCTTTGCTTCTTCCACCTCATTCCAAGTATTTCAGGAGTTGGAAACCACAGTGGATCTGGGGATGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571170.1
ENST00000571347.1