RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PELI3 (Homo sapiens)

Ensembl gene IDs: ENSG00000174516

Ensembl transcript IDs: ENST00000320740.12, ENST00000349459.10, ENST00000524466.5, ENST00000526296.5, ENST00000527230.1, ENST00000528752.1, ENST00000532970.5, ENST00000618547.4

Found 841 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACTGGGGCCGCGCTGCATTTGCCTCCTGCCGCTGGGCCTCCAGTTaGTTCAGTGTGGGAGCCCGCAGCAGCCCCGCCGGTGTGCGCCAC +
Preference number: 1 (lower is better)
Translates to: HWGRAAFASCRWASS*FSVGARSSPAGVRH
Trigger: GTGGCGCACACCGGCGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR CCA 90 bp GCGCTGCATTTGCCTCCTGCCGCTGGGCCTCCAGTTGCTTCAGTGTaGGAGCCCGCAGCAGCCCCGCCGGTGTGCGCCACAGCAGTGTGG +
Preference number: 1 (lower is better)
Translates to: ALHLPPAAGPPVASV*EPAAAPPVCATAVW
Trigger: CCACACTGCTGTGGCGCACACCGGCGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAATGCAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR GCA 90 bp GGCCCAGTAGCGGGCAGTCTTCTCAGAGCAGACGTGGCCGCAAGGTaGAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCGGC +
Preference number: 1 (lower is better)
Translates to: GPVAGSLLRADVAAR*KGMARRPRVQAEAG
Trigger: GCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTCTGCTCTGAGAAGACTGCCCGCTACTGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR CCA 90 bp CGGGCAGTCTTCTCAGAGCAGACGTGGCCGCAAGGTGCAAAGGCATaGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCGGCCTCCTGGCCA +
Preference number: 1 (lower is better)
Translates to: RAVFSEQTWPQGAKA*LGGPGSRQRPASWP
Trigger: TGGCCAGGAGGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTCTGCTCTGAGAAGACTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR GCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTaGCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGC +
Preference number: 1 (lower is better)
Translates to: QSRAHSGYQQVLGPA*HPPTTHLGAGGIAR
Trigger: GCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR CCA 90 bp GCTAGAGGCATCGAAGCCAGCGGCATAGATGCGGGCAGTATAGGGTaGCCGGCGGTCACAGAGGATGCGGCAGGCATAGCGGGAGATGGT +
Preference number: 1 (lower is better)
Translates to: ARGIEASGIDAGSIG*PAVTEDAAGIAGDG
Trigger: ACCATCTCCCGCTATGCCTGCCGCATCCTCTGTGACCGCCGGCCACCCTATACTGCCCGCATCTATGCCGCTGGCTTCGATGCCTCTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR GCA 90 bp GCCTTGATCGCATCACCCCCTGGACCTCCAGTGGTATGCATGCTATaGTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAAGTGGC +
Preference number: 1 (lower is better)
Translates to: ALIASPPGPPVVCML*LGTLVCLPVCGTSG
Trigger: GCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGGAGGTCCAGGGGGTGATGCGATCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR GCA 90 bp TCTGTGTGTGCCTTGATCGCATCACCCCCTGGACCTCCAGTGGTATaGATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGG +
Preference number: 1 (lower is better)
Translates to: SVCALIASPPGPPVV*MLCLGTLVCLPVCG
Trigger: CCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGGAGGTCCAGGGGGTGATGCGATCAAGGCACACACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR TCA 90 bp TTGGCCAATGTGCTCATGCCAGAGAAGAGCAGTGCATGGCCAGTTTaGGGAGCACGGCCATGTGACCTTGGACAGCCCCTGCCTCTCTCT +
Preference number: 1 (lower is better)
Translates to: LANVLMPEKSSAWPV*GARPCDLGQPLPLS
Trigger: AGAGAGAGGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCTTCTCTGGCATGAGCACATTGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR TCA 90 bp GAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGAAGGATGAAGGATaGGTGTCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCT +
Preference number: 1 (lower is better)
Translates to: EVYRGTQGGSRKDEG*VSETGLAGSGHSQP
Trigger: AGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACACTCATCCTTCATCCTTCCTGCTGCCGCCCTGGGTTCCTCTATAAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR TCA 90 bp CCATGCTCCAGCCATCCTGACTCTGTCCCTGGATTTCTGGCTTACTaGCACCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCAC +
Preference number: 1 (lower is better)
Translates to: PCSSHPDSVPGFLAY*HLSLCTGPPFCIEH
Trigger: GTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGGTGTCAGTAAGCCAGAAATCCAGGGACAGAGTCAGGATGGCTGGAGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR TCA 90 bp CTGCCTCTCTCTAGGACTCACTCCCGGTCCCTAACCTCAGCTCTCTaGTCTGTACCACAAGGAGCTGCCACTAACACCTGTGTCAGAACT +
Preference number: 1 (lower is better)
Translates to: LPLSRTHSRSLTSAL*SVPQGAATNTCVRT
Trigger: AGTTCTGACACAGGTGTTAGTGGCAGCTCCTTGTGGTACAGATCAGAGAGCTGAGGTTAGGGACCGGGAGTGAGTCCTAGAGAGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR CCA 90 bp ATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATaGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACT +
Preference number: 1 (lower is better)
Translates to: MDVVIIIIISTVRGT*WAFRDDGPCVTADT
Trigger: AGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
3UTR TCA 90 bp CAATCTGGAACATGTCTGTGTCGCTATCATGTGTATACTCCACTATaGCCGAGTGGCTCCGGGACAGTGTATACGAGATGCTGTGCTGAC +
Preference number: 1 (lower is better)
Translates to: QSGTCLCRYHVYTPL*PSGSGTVYTRCCAD
Trigger: GTCAGCACAGCATCTCGTATACACTGTCCCGGAGCCACTCGGTCATAGTGGAGTATACACATGATAGCGACACAGACATGTTCCAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR GCA 90 bp GCCACTAACACCTGTGTCAGAACTACTGTAAGGACCCTTTCCTCCTaGGAGAGGAGAACAGTGCTAAACCTGTCTGAACGTGATAGACAT +
Preference number: 1 (lower is better)
Translates to: ATNTCVRTTVRTLSS*ERRTVLNLSERDRH
Trigger: ATGTCTATCACGTTCAGACAGGTTTAGCACTGTTCTCCTCTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGACACAGGTGTTAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR CAA 90 bp GCACTGGGGCCGCGCTGCATTTGCCTCCTGCCGCTGGGCCTCCAGTaGCTTCAGTGTGGGAGCCCGCAGCAGCCCCGCCGGTGTGCGCCA +
Preference number: 2 (lower is better)
Translates to: ALGPRCICLLPLGLQ*LQCGSPQQPRRCAP
Trigger: TGGCGCACACCGGCGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR TCA 90 bp GAGCAGACGTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGGGAAGGCCAGAGTGCTaGGGCCCACGGGGCACTGGG +
Preference number: 2 (lower is better)
Translates to: EQTWPQGAKAWLGGPGSRGRPEC*GPRGTG
Trigger: CCCAGTGCCCCGTGGGCCTCAGCACTCTGGCCTTCC...CCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTCTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR GCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCGTTTGTCGGGCGCTGTaGGGCCACGGGCTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCVCRAL*GHGLGW
Trigger: CCAGCCCAGCCCGTGGCCGCACAGCGCCCGACAAAC...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCGATGCAGAGCTCCCTCTaGGCTGCAGGAGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: PRSPARHPGLSPRRSRLPMQSSL*AAGGGD
Trigger: GTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCAT...CGGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CCA 90 bp CCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCGGCAAGGCCATGGGGCTaGGCTTTCCTCCATCGACCC +
Preference number: 2 (lower is better)
Translates to: PRSPARHPGLSPRRSRLPARPWG*AFLHRP
Trigger: GGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGC...CGGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CCA 90 bp ACCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCCCAGTTGCTTCAGTGTaGGAGCCCGCAGCAGCCCCG +
Preference number: 2 (lower is better)
Translates to: TEISRQTPGAESSEKPPAPVASV*EPAAAP
Trigger: CGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGG...GGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR GCA 90 bp GTGCCCGCAGCGGACGTAGACCCAGGGCTGCTGTTTGTCGGGCGCTGTGCGGCCAGCCAGCGGCATAGATaGGGGCAGTATAGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: VPAADVDPGLLFVGRCAASQRHR*GQYRVA
Trigger: GGCCACCCTATACTGCCCGCATCTATGCCGCTGGCT...GGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGTCTACGTCCGCTGCGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR GCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGGTGCTAGGCCCAGCCTaGCACCCACCCACCACTCAC +
Preference number: 2 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRVLGPA*HPPTTH
Trigger: GTGAGTGGTGGGTGGGTGGCAGGCTGGGCCTAGCAC...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGGGGCCGCGCTGCATTTaGCTCCTGCCGCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRGPRCI*LLPLGL
Trigger: GAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCC...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR GCA 90 bp CCCGCAATGTGTACACATTCCCACAGACCGAGATCTCCCGCCAGACACCCGGGGGGGCCGCGCTGCATTTaGCTCCTGCCGCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: PAMCTHSHRPRSPARHPGGPRCI*LLPLGL
Trigger: GAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCC...CCCCGGGTGTCTGGCGGGAGATCTCGGTCTGTGGGAATGTGTACACATTGCGGG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGAGGCCCACGGGGCACTaGGGCCGCGCTGCATTTGCC +
Preference number: 2 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVRPTGH*GRAAFA
Trigger: GGCAAATGCAGCGCGGCCCCAGTGCCCCGTGGGCCT...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGCGGCCACGGGCTaGGCTGGGGAAGGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: PPLTWGLEALHACGACGTCAATG*AGEGQS
Trigger: ACTCTGGCCTTCCCCAGCCCAGCCCGTGGCCGCACA...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGTGTGCGGCCACGGGCTaGGCTGGGGAAGGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: GRARPWGWAFLHRPRTELCAATG*AGEGQS
Trigger: ACTCTGGCCTTCCCCAGCCCAGCCCGTGGCCGCACA...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CACAGACCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCGCGGGCAGTATAGGGTaGCCGGCGGTCACAGAGGAT +
Preference number: 2 (lower is better)
Translates to: HRPRSPARHPGLSPRRSRAGSIG*PAVTED
Trigger: ATCCTCTGTGACCGCCGGCCACCCTATACTGCCCGC...GCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR GCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGCGGCACGATGTGGGATaGCCCAGGAAGGGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: GRARPWGWAFLHRPRTELRHDVG*PRKGKA
Trigger: GGCCTTGCCCTTCCTGGGGCATCCCACATCGTGCCG...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp AGGCATCGAAGCCAGCGGCATAGATGCGGGCAGTATAGGGTGGCCGGCGGTCACCGCTGGGCCTCCAGTTaGTTCAGTGTGGGAGCCCGC +
Preference number: 2 (lower is better)
Translates to: RHRSQRHRCGQYRVAGGHRWASS*FSVGAR
Trigger: GCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCG...GTGACCGCCGGCCACCCTATACTGCCCGCATCTATGCCGCTGGCTTCGATGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CCA 90 bp GTGCCCGCAGCGGACGTAGACCCAGGGCTGCTGTTTGTCGGGCGCTGTGCGGCCTCCAACATGTCCATCTaGTGTGGCTGTGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: VPAADVDPGLLFVGRCAASNMSI*CGCASR
Trigger: CCTGCTGGCACAGCCACACCAGATGGACATGTTGGA...GGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGTCTACGTCCGCTGCGGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTGTCGGCGGCACGATGTaGGATGCCCCAGGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: PPLTWGLEALHACGACGTVGGTM*DAPGRA
Trigger: TGCCCTTCCTGGGGCATCCCACATCGTGCCGCCGAC...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGGGCATGTGGGACTTGTaGGGGCAGCTGAGCAGCGAG +
Preference number: 2 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRGMWDL*GQLSSE
Trigger: CTCGCTGCTCAGCTGCCCCCACAAGTCCCACATGCC...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGCCAGTTGCTTCAGTGTaGGAGCCCGCAGCAGCCCCG +
Preference number: 2 (lower is better)
Translates to: GRARPWGWAFLHRPRTELPVASV*EPAAAP
Trigger: CGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGG...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGCAAGGTGCAAAGGCATaGCTAGGCGGCCCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRQGAKA*LGGPGS
Trigger: GGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTG...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR GCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGGAGTGTCCCACATaGAGAGCTCCCTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRRECPT*RAPSGL
Trigger: CAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCT...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCCGGCACGATGTGGGATaGCCCAGGAAGGGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGRHDVG*PRKGKA
Trigger: GGCCTTGCCCTTCCTGGGGCATCCCACATCGTGCCG...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGGCAGCCCCGCCGGTGTaGGCCACAGCAGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQAAPPV*ATAVWP
Trigger: GGGCCACACTGCTGTGGCGCACACCGGCGGGGCTGC...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR GCA 90 bp CACCAGGACTCCATTGGTGGTCAGTCCATCCATCAGGCCATCTGGGGTCCGCCAGCACTGGGGCCGCGCTaGATTTGCCTCCTGCCGCTG +
Preference number: 2 (lower is better)
Translates to: HQDSIGGQSIHQAIWGPPALGPR*ICLLPL
Trigger: CAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGC...TGGCGGACCCCAGATGGCCTGATGGATGGACTGACCACCAATGGAGTCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR GCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAAGCCGCCTGCCGGGTaGATCACCAGGACTCCATTG +
Preference number: 2 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRKPPAG*ITRTPL
Trigger: CAATGGAGTCCTGGTGATGCACCCGGCAGGCGGCTT...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR GCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAACCAGCTTGCCCCGCTaGTGGGCTGAGCGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPTSLPR*WAERLS
Trigger: GGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGT...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CCA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCATGCAGAGCTCCCTCTaGGCTGCAGGAGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: PWGWAFLHRPRTELVLKAMQSSL*AAGGGD
Trigger: GTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCAT...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GAGCAGACGTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCCCCATCAGCATGACTaGGGTGGAGATCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: EQTWPQGAKAWLGGPGSRPHQHD*GGDLGD
Trigger: GTCCCCAAGATCTCCACCCCAGTCATGCTGATGGGG...CCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGGTCGGCGGCACGATGTaGGATGCCCCAGGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVVGGTM*DAPGRA
Trigger: TGCCCTTCCTGGGGCATCCCACATCGTGCCGCCGAC...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCGTCCACTATGACCGAGTaGCTCCGGGACAGTGTATAC +
Preference number: 2 (lower is better)
Translates to: PRSPARHPGLSPRRSRLPSTMTE*LRDSVY
Trigger: GTATACACTGTCCCGGAGCCACTCGGTCATAGTGGA...CGGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR TCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAAGGCCCCATCAGCATaGCTGGGGTGGAGATCTTGG +
Preference number: 2 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCKAPSA*LGWRSW
Trigger: CCAAGATCTCCACCCCAGTCATGCTGATGGGGCCTT...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGAGGCTGAGCTCCTATaGCACCTCCTCCGTGAAGCC +
Preference number: 2 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAEAELL*HLLREA
Trigger: GGCTTCACGGAGGAGGTGTCATAGGAGCTCAGCCTC...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAAGGGAGTGTCCCACATaGAGAGCTCCCTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAARECPT*RAPSGL
Trigger: CAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCT...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCAGGGAGTGTCCCACATaGAGAGCTCCCTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: PWGWAFLHRPRTELVLKARECPT*RAPSGL
Trigger: CAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCT...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGCTAGGCCCAGCCTaGCACCCACCCACCACTCAC +
Preference number: 2 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGVLGPA*HPPTTH
Trigger: GTGAGTGGTGGGTGGGTGGCAGGCTGGGCCTAGCAC...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp ACCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCATGAGAGAGCCGTCCTaGAGCACGTTGGACTCGTTT +
Preference number: 2 (lower is better)
Translates to: TEISRQTPGAESSEKPPAMREPS*STLDSF
Trigger: AAACGAGTCCAACGTGCTGCAGGACGGCTCTCTCAT...GGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR GCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGGCGGTCACAGAGGATaGGGCAGGCATAGCGGGAGA +
Preference number: 2 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLGGHRG*GRHSGR
Trigger: TCTCCCGCTATGCCTGCCGCATCCTCTGTGACCGCC...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGATGCAGAGCTCCCTCTaGGCTGCAGGAGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGMQSSL*AAGGGD
Trigger: GTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCAT...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGCATGTCCATCTGGTGTaGCTGTGCCAGCAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRHVHLV*LCQQGV
Trigger: CACTCCCTGCTGGCACAGCCACACCAGATGGACATG...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGCATGTCCATCTGGTGTaGCTGTGCCAGCAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWHVHLV*LCQQGV
Trigger: CACTCCCTGCTGGCACAGCCACACCAGATGGACATG...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGCCCCATCAGCATGACTaGGGTGGAGATCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRPHQHD*GGDLGD
Trigger: GTCCCCAAGATCTCCACCCCAGTCATGCTGATGGGG...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGCAAGGCCATGGGGCTaGGCTTTCCTCCATCGACCC +
Preference number: 2 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLARPWG*AFLHRP
Trigger: GGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGC...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGGCAAGGCCATGGGGCTaGGCTTTCCTCCATCGACCC +
Preference number: 2 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGARPWG*AFLHRP
Trigger: GGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGC...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAGTCGGCGGCACGATGTaGGATGCCCCAGGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPVGGTM*DAPGRA
Trigger: TGCCCTTCCTGGGGCATCCCACATCGTGCCGCCGAC...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAATAGCCAGCCTAAGCTaGGGGTCAAAGGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAIASLS*GSKAPG
Trigger: GCCAGGGGCCTTTGACCCCCAGCTTAGGCTGGCTAT...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGTTTGCCTCCTGCCGCTaGGCCTCCAGTTGCTTCAGT +
Preference number: 2 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWFASCR*ASSCFS
Trigger: ACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAA...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTCAAGGTGCAAAGGCATaGCTAGGCGGCCCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLQGAKA*LGGPGS
Trigger: GGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTG...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTAAGGGGCAGGCGGCATaGAAAGCATGGGTGCCGTGG +
Preference number: 2 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLKGQAA*KAWVPW
Trigger: CCACGGCACCCATGCTTTCCATGCCGCCTGCCCCTT...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR TCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAAAGGCCCCATCAGCATaGCTGGGGTGGAGATCTTGG +
Preference number: 2 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAKAPSA*LGWRSW
Trigger: CCAAGATCTCCACCCCAGTCATGCTGATGGGGCCTT...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTTGGCTTACTGACACCTaGGCCTGTGCACAGGCCCTC +
Preference number: 2 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLWLTDT*ACAQAL
Trigger: GAGGGCCTGTGCACAGGCTCAGGTGTCAGTAAGCCA...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACACGGCACGATGTGGGATaGCCCAGGAAGGGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: SPSNMSIWCGCASRECPTRHDVG*PRKGKA
Trigger: GGCCTTGCCCTTCCTGGGGCATCCCACATCGTGCCG...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACAGTGCTAGGCCCAGCCTaGCACCCACCCACCACTCAC +
Preference number: 2 (lower is better)
Translates to: SPSNMSIWCGCASRECPTVLGPA*HPPTTH
Trigger: GTGAGTGGTGGGTGGGTGGCAGGCTGGGCCTAGCAC...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACACGCTGGGCCTCCAGTTaGTTCAGTGTGGGAGCCCGC +
Preference number: 2 (lower is better)
Translates to: SPSNMSIWCGCASRECPTRWASS*FSVGAR
Trigger: GCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCG...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR GCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGCACTGGGGCCGCGCTaGATTTGCCTCCTGCCGCTG +
Preference number: 2 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVALGPR*ICLLPL
Trigger: CAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGC...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAATGCAGAGCTCCCTCTaGGCTGCAGGAGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPMQSSL*AAGGGD
Trigger: GTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCAT...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGCCCCATCAGCATGACTaGGGTGGAGATCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: GRARPWGWAFLHRPRTELPHQHD*GGDLGD
Trigger: GTCCCCAAGATCTCCACCCCAGTCATGCTGATGGGG...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGATAGCCAGCCTAAGCTaGGGGTCAAAGGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRIASLS*GSKAPG
Trigger: GCCAGGGGCCTTTGACCCCCAGCTTAGGCTGGCTAT...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTATAGCCAGCCTAAGCTaGGGGTCAAAGGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLIASLS*GSKAPG
Trigger: GCCAGGGGCCTTTGACCCCCAGCTTAGGCTGGCTAT...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCTGTCTGAAACTGGGTTaGCAGGCTCAGGGCATAGCC +
Preference number: 2 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCCLKLG*QAQGIA
Trigger: GGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACA...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGTGTCTGAAACTGGGTTaGCAGGCTCAGGGCATAGCC +
Preference number: 2 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWCLKLG*QAQGIA
Trigger: GGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACA...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAAAGGGGCAGGCGGCATaGAAAGCATGGGTGCCGTGG +
Preference number: 2 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGKGQAA*KAWVPW
Trigger: CCACGGCACCCATGCTTTCCATGCCGCCTGCCCCTT...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR TCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTCACAGCCGACACTCTTaGCCAGTGAGTCCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLHSRHS*PVSPLS
Trigger: GGAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTG...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCGTGGGCATTCAGGGATaGTGGCCCTTGTGTCACAGC +
Preference number: 2 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGVGIQG*WPLCHS
Trigger: GCTGTGACACAAGGGCCATCATCCCTGAATGCCCAC...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGGGCATTCAGGGATaGTGGCCCTTGTGTCACAGC +
Preference number: 2 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLVGIQG*WPLCHS
Trigger: GCTGTGACACAAGGGCCATCATCCCTGAATGCCCAC...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp TCCACCAGCTTGCCCCGCTGCTGGGCTGAGCGGCTGTCCCGCAATGTGTACACAGTGTATACTCCACTATaGCCGAGTGGCTCCGGGACA +
Preference number: 2 (lower is better)
Translates to: STSLPRCWAERLSRNVYTVYTPL*PSGSGT
Trigger: TGTCCCGGAGCCACTCGGTCATAGTGGAGTATACAC...TGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR GCA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCAGGGAGTGTCCCACATaGAGAGCTCCCTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLRECPT*RAPSGL
Trigger: CAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCT...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
3UTR-3UTR GCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGGAGGCATTGCACGCATaGGGGGCATGTGGGACTTGT +
Preference number: 2 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVEALHA*GACGTC
Trigger: ACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTC...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGGGGGGCTGGAGGCATTaGACGCATGCGGGGCATGTG +
Preference number: 2 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQGGWRH*THAGHV
Trigger: CACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCC...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGTGCTAGGCCCAGCCTaGCACCCACCCACCACTCAC +
Preference number: 2 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCVLGPA*HPPTTH
Trigger: GTGAGTGGTGGGTGGGTGGCAGGCTGGGCCTAGCAC...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGTGCTAGGCCCAGCCTaGCACCCACCCACCACTCAC +
Preference number: 2 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVVLGPA*HPPTTH
Trigger: GTGAGTGGTGGGTGGGTGGCAGGCTGGGCCTAGCAC...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACAGACGTGGCCGCAAGGTaGAAAGGCATGGCTAGGCGG +
Preference number: 2 (lower is better)
Translates to: SPSNMSIWCGCASRECPTDVAAR*KGMARR
Trigger: CCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTC...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR GCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTAGGCGGACGCAGCCATaGTCGCCGGTAAGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLRRTQP*SPVSQA
Trigger: GGCCTGGCTTACCGGCGAGCATGGCTGCGTCCGCCT...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp ACAGAGGATGCGGCAGGCATAGCGGGAGATGGTGCTCTGGGCAGAAGGGCCCTCTCCAACATGTCCATCTaGTGTGGCTGTGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: TEDAAGIAGDGALGRRALSNMSI*CGCASR
Trigger: CCTGCTGGCACAGCCACACCAGATGGACATGTTGGA...GAGGGCCCTTCTGCCCAGAGCACCATCTCCCGCTATGCCTGCCGCATCCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CCA 90 bp GCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCTCCAACATGTCCATCTaGTGTGGCTGTGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: AMGLGFPPSTQDRAGAEGSNMSI*CGCASR
Trigger: CCTGCTGGCACAGCCACACCAGATGGACATGTTGGA...GCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCCACTCACTTGGGGGCTaGAGGCATTGCACGCATGCG +
Preference number: 2 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLHSLGG*RHCTHA
Trigger: CGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
3UTR-3UTR CCA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCCACCCACCACTCACTTaGGGGCTGGAGGCATTGCAC +
Preference number: 2 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLHPPLT*GLEALH
Trigger: GTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTG...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
3UTR-3UTR CCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTCGTCCTGCAGCACGTTaGACTCGTTTTCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLRPAAR*TRFPPA
Trigger: GGCAGGTGGAAAACGAGTCCAACGTGCTGCAGGACG...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528752.1
3UTR-3UTR CCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTGGTGCCGTGGGGCAGTaGTGTCTGGGCCCAGTAGCG +
Preference number: 2 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLGAVGQ*CLGPVA
Trigger: CGCTACTGGGCCCAGACACCACTGCCCCACGGCACC...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAAGGCATAGCGGGAGATaGTGCTCTGGGCAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPRHSGR*CSGQKG
Trigger: GCCCTTCTGCCCAGAGCACCATCTCCCGCTATGCCT...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR CAA 90 bp GGACTTGCTTCCCATCTTGTGGACTCGGAGGGTTCCGAGCAGCCGTaGAGGCTGAGCTCCTATGACACCTCCTCCGTGAAGCCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: GLASHLVDSEGSEQP*RLSSYDTSSVKPPS
Trigger: TGAGGGAGGCTTCACGGAGGAGGTGTCATAGGAGCTCAGCCTCAACGGCTGCTCGGAACCCTCCGAGTCCACAAGATGGGAAGCAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGACTTGTGGGGGCAGCTaGGCAGCGAGGTTTATAGAG +
Preference number: 2 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRTCGGS*AARFIE
Trigger: CTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGT...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGACACAGCCGACACTCTTaGCCAGTGAGTCCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGHSRHS*PVSPLS
Trigger: GGAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTG...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp AGAGCAGTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCGGACCCTGGTCTGTCTaGCTGTCTGTGGGACAAGTG +
Preference number: 2 (lower is better)
Translates to: RAVHGQFEEHGHVTLDSPGPWSV*LSVGQV
Trigger: CACTTGTCCCACAGACAGGCAGACAGACCAGGGTCC...GGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR GCA 90 bp GTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCTGCCTCGGACCTCCAGTGGTATaGATGCTATGCTTGGGGACC +
Preference number: 2 (lower is better)
Translates to: VHGQFEEHGHVTLDSPCLGPPVV*MLCLGT
Trigger: GGTCCCCAAGCATAGCATGCATACCACTGGAGGTCC...GAGGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR GCA 90 bp CACAGACCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCACAGTGTATACGAGATaGTGTGCTGACCACGGTTAC +
Preference number: 2 (lower is better)
Translates to: HRPRSPARHPGLSPRRSRTVYTR*CADHGY
Trigger: GTAACCGTGGTCAGCACAGCATCTCGTATACACTGT...GCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTATGCAGAGCTCCCTCTaGGCTGCAGGAGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCMQSSL*AAGGGD
Trigger: GTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCAT...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCACATGTCCATCTGGTGTaGCTGTGCCAGCAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPHVHLV*LCQQGV
Trigger: CACTCCCTGCTGGCACAGCCACACCAGATGGACATG...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCTCCAACATGTCCATCTaGTGTGGCTGTGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGSNMSI*CGCASR
Trigger: CCTGCTGGCACAGCCACACCAGATGGACATGTTGGA...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTGTCGGCGGCACGATGTaGGATGCCCCAGGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLVGGTM*DAPGRA
Trigger: TGCCCTTCCTGGGGCATCCCACATCGTGCCGCCGAC...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGGCATGTGGGACTTGTaGGGGCAGCTGAGCAGCGAG +
Preference number: 2 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVGMWDL*GQLSSE
Trigger: CTCGCTGCTCAGCTGCCCCCACAAGTCCCACATGCC...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGGGCATGTGGGACTTGTaGGGGCAGCTGAGCAGCGAG +
Preference number: 2 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQGMWDL*GQLSSE
Trigger: CTCGCTGCTCAGCTGCCCCCACAAGTCCCACATGCC...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCCACTCACTTGGGGGCTaGAGGCATTGCACGCATGCG +
Preference number: 2 (lower is better)
Translates to: LLREASLTFPLPVRPATAHSLGG*RHCTHA
Trigger: CGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACACACTCACTTGGGGGCTaGAGGCATTGCACGCATGCG +
Preference number: 2 (lower is better)
Translates to: SPSNMSIWCGCASRECPTHSLGG*RHCTHA
Trigger: CGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCTGCCTCGATCGCATCACCCCCTaGACCTCCAGTGGTATGCAT +
Preference number: 2 (lower is better)
Translates to: VHGQFEEHGHVTLDSPCLDRITP*TSSGMH
Trigger: ATGCATACCACTGGAGGTCCAGGGGGTGATGCGATC...GAGGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR TCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGAGGAAGGATGAAGGATaGGTGTCTGAAACTGGGTTG +
Preference number: 2 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWRKDEG*VSETGL
Trigger: CAACCCAGTTTCAGACACTCATCCTTCATCCTTCCT...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCACTTGTGGGGGCAGCTaGGCAGCGAGGTTTATAGAG +
Preference number: 2 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLTCGGS*AARFIE
Trigger: CTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGT...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
3UTR-3UTR TCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGCTTTTCCATTACCAGTaGGGCCTGCCACAGCCTGAT +
Preference number: 2 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVLFHYQ*GLPQPD
Trigger: ATCAGGCTGTGGCAGGCCTCACTGGTAATGGAAAAG...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCCTTTTCCATTACCAGTaGGGCCTGCCACAGCCTGAT +
Preference number: 2 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGLFHYQ*GLPQPD
Trigger: ATCAGGCTGTGGCAGGCCTCACTGGTAATGGAAAAG...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGAGGCTGAGCTCCTATaGCACCTCCTCCGTGAAGCC +
Preference number: 2 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCEAELL*HLLREA
Trigger: GGCTTCACGGAGGAGGTGTCATAGGAGCTCAGCCTC...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGTGGCTTACTGACACCTaGGCCTGTGCACAGGCCCTC +
Preference number: 2 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQWLTDT*ACAQAL
Trigger: GAGGGCCTGTGCACAGGCTCAGGTGTCAGTAAGCCA...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCGACACTCTTGACCAGTaGGTCCTCTCTCCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGDTLDQ*VLSPPF
Trigger: AAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGTC...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGTGGGCATTCAGGGATaGTGGCCCTTGTGTCACAGC +
Preference number: 2 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGVGIQG*WPLCHS
Trigger: GCTGTGACACAAGGGCCATCATCCCTGAATGCCCAC...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTAGGGAGTGTCCCACATaGAGAGCTCCCTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCRECPT*RAPSGL
Trigger: CAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCT...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACAGAGGCATTGCACGCATaGGGGGCATGTGGGACTTGT +
Preference number: 2 (lower is better)
Translates to: SPSNMSIWCGCASRECPTEALHA*GACGTC
Trigger: ACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTC...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp GTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCTGCCTCGTGGTATGCATGCTATaGTTGGGGACCCTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: VHGQFEEHGHVTLDSPCLVVCML*LGTLVC
Trigger: ACAGACCAGGGTCCCCAAGCATAGCATGCATACCAC...GAGGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR GCA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCATGAGAGAGCCGTCCTaGAGCACGTTGGACTCGTTT +
Preference number: 2 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLMREPS*STLDSF
Trigger: AAACGAGTCCAACGTGCTGCAGGACGGCTCTCTCAT...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR GCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATGTTTGTCGGGCGCTGTaGGGCCACGGGCTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHVCRAL*GHGLGW
Trigger: CCAGCCCAGCCCGTGGCCGCACAGCGCCCGACAAAC...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGATAGCCAGCCTAAGCTaGGGGTCAAAGGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQIASLS*GSKAPG
Trigger: GCCAGGGGCCTTTGACCCCCAGCTTAGGCTGGCTAT...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCATGTCTGAAACTGGGTTaGCAGGCTCAGGGCATAGCC +
Preference number: 2 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPCLKLG*QAQGIA
Trigger: GGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACA...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp GTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCTGCCTCTATGCATGCTATGCTTaGGGACCCTGGTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: VHGQFEEHGHVTLDSPCLYACYA*GPWSVC
Trigger: GCAGACAGACCAGGGTCCCCAAGCATAGCATGCATA...GAGGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR CCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATTTGCCTCCTGCCGCTaGGCCTCCAGTTGCTTCAGT +
Preference number: 2 (lower is better)
Translates to: SPSNMSIWCGCASRECPTFASCR*ASSCFS
Trigger: ACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAA...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTCAGAGGCCGGCCTCCTaGCCAAGCCATAGAGGCACA +
Preference number: 2 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLQRPAS*PSHRGT
Trigger: TGTGCCTCTATGGCTTGGCCAGGAGGCCGGCCTCTG...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATAGCTTGCCCCGCTGCTaGGCTGAGCGGCTGTCCCGC +
Preference number: 2 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHSLPRC*AERLSR
Trigger: GCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCT...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR CAA 90 bp TTGATCGCATCACCCCCTGGACCTCCAGTGGTATGCATGCTATGCTaGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAAGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: LIASPPGPPVVCMLC*GTLVCLPVCGTSGS
Trigger: TGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGGAGGTCCAGGGGGTGATGCGATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR TCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTAAGGCCCCATCAGCATaGCTGGGGTGGAGATCTTGG +
Preference number: 2 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCKAPSA*LGWRSW
Trigger: CCAAGATCTCCACCCCAGTCATGCTGATGGGGCCTT...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACAACTTGTGGGGGCAGCTaGGCAGCGAGGTTTATAGAG +
Preference number: 2 (lower is better)
Translates to: SPSNMSIWCGCASRECPTTCGGS*AARFIE
Trigger: CTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGT...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCACTTGTGGGGGCAGCTaGGCAGCGAGGTTTATAGAG +
Preference number: 2 (lower is better)
Translates to: LLREASLTFPLPVRPATATCGGS*AARFIE
Trigger: CTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGT...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp GCTGCCACTAACACCTGTGTCAGAACTACTGTAAGGACCCTTTCCTCCTGCGAGAGCTGCCAGCAGCCTTaGAGCCACCTGGGACTGCAC +
Preference number: 2 (lower is better)
Translates to: AATNTCVRTTVRTLSSCESCQQP*SHLGLH
Trigger: GTGCAGTCCCAGGTGGCTTCAAGGCTGCTGGCAGCT...CTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGACACAGGTGTTAGTGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR GCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCTCATCATCAGCACAGTaGGGGGCACATGGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGSSSAQ*GAHGGH
Trigger: ATGCCCACCATGTGCCCCGCACTGTGCTGATGATGA...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
3UTR-3UTR GCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGGCAGCCCCGCCGGTGTaGGCCACAGCAGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWAAPPV*ATAVWP
Trigger: GGGCCACACTGCTGTGGCGCACACCGGCGGGGCTGC...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528752.1
3UTR-3UTR GCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATAGGCGGACGCAGCCATaGTCGCCGGTAAGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHRRTQP*SPVSQA
Trigger: GGCCTGGCTTACCGGCGAGCATGGCTGCGTCCGCCT...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTCATGTCCATCTGGTGTaGCTGTGCCAGCAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCHVHLV*LCQQGV
Trigger: CACTCCCTGCTGGCACAGCCACACCAGATGGACATG...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTCCCCATCAGCATGACTaGGGTGGAGATCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCPHQHD*GGDLGD
Trigger: GTCCCCAAGATCTCCACCCCAGTCATGCTGATGGGG...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTCACCCACCACTCACTTaGGGGCTGGAGGCATTGCAC +
Preference number: 2 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLHPPLT*GLEALH
Trigger: GTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTG...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGATCCAGCATCTTCCCTaGTCACATGGTCCCAACCTT +
Preference number: 2 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRIQHLP*SHGPNL
Trigger: AAGGTTGGGACCATGTGACCAGGGAAGATGCTGGAT...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACACGTCCTGCAGCACGTTaGACTCGTTTTCCACCAGCT +
Preference number: 2 (lower is better)
Translates to: SPSNMSIWCGCASRECPTRPAAR*TRFPPA
Trigger: AGCTGGTGGAAAACGAGTCCAACGTGCTGCAGGACG...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR TCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTAAGGCCCCATCAGCATaGCTGGGGTGGAGATCTTGG +
Preference number: 2 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLKAPSA*LGWRSW
Trigger: CCAAGATCTCCACCCCAGTCATGCTGATGGGGCCTT...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGAGGAAGGATGAAGGATaGGTGTCTGAAACTGGGTTG +
Preference number: 2 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRRKDEG*VSETGL
Trigger: CAACCCAGTTTCAGACACTCATCCTTCATCCTTCCT...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGAGGAAGGATGAAGGATaGGTGTCTGAAACTGGGTTG +
Preference number: 2 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGRKDEG*VSETGL
Trigger: CAACCCAGTTTCAGACACTCATCCTTCATCCTTCCT...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCACGGCACGATGTGGGATaGCCCAGGAAGGGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: PLLTPDRPQMRFRILHPARHDVG*PRKGKA
Trigger: GGCCTTGCCCTTCCTGGGGCATCCCACATCGTGCCG...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGCGCATGAAGCCGTGTTaGCATTTGTTAACAGTCTGT +
Preference number: 2 (lower is better)
Translates to: GRARPWGWAFLHRPRTELRMKPC*HLLTVC
Trigger: ACAGACTGTTAACAAATGGCAACACGGCTTCATGCG...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAATGGTCCCAACCTTTTaGTCCACCCCCTTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGMVPTF*STPFSV
Trigger: AACAGAGAAGGGGGTGGAGCAAAAGGTTGGGACCAT...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGTCCAACATGTCCATCTaGTGTGGCTGTGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQSNMSI*CGCASR
Trigger: CCTGCTGGCACAGCCACACCAGATGGACATGTTGGA...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGAACCAGGTCTGATTaGCTCTGTGTCCCCAGATAC +
Preference number: 2 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCGTRSD*LCVPRY
Trigger: GTATCTGGGGACACAGAGGCAATCAGACCTGGTTCC...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCGCAAGGCCATGGGGCTaGGCTTTCCTCCATCGACCC +
Preference number: 2 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILARPWG*AFLHRP
Trigger: GGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGC...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCTCTTCCCTGGTCACATaGTCCCAACCTTTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGSSLVT*SQPFAP
Trigger: TGGAGCAAAAGGTTGGGACCATGTGACCAGGGAAGA...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCATCCAGCATCTTCCCTaGTCACATGGTCCCAACCTT +
Preference number: 2 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGIQHLP*SHGPNL
Trigger: AAGGTTGGGACCATGTGACCAGGGAAGATGCTGGAT...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACAATCCAGCATCTTCCCTaGTCACATGGTCCCAACCTT +
Preference number: 2 (lower is better)
Translates to: SPSNMSIWCGCASRECPTIQHLP*SHGPNL
Trigger: AAGGTTGGGACCATGTGACCAGGGAAGATGCTGGAT...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGGTGGAGCGGCCAATCTaGAACATGTCTGTGTCGCTA +
Preference number: 2 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQVERPI*NMSVSL
Trigger: TAGCGACACAGACATGTTCCAGATTGGCCGCTCCAC...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTCCAGGACTCCATTGGTaGTCAGTCCATCCATCAGGC +
Preference number: 2 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLPGLHW*SVHPSG
Trigger: GCCTGATGGATGGACTGACCACCAATGGAGTCCTGG...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR TCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCAGGAAGGATGAAGGATaGGTGTCTGAAACTGGGTTG +
Preference number: 2 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGRKDEG*VSETGL
Trigger: CAACCCAGTTTCAGACACTCATCCTTCATCCTTCCT...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCATTACCAGTGAGGCCTaGCACAGCCTGATTTGTACT +
Preference number: 2 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGITSEA*HSLICT
Trigger: AGTACAAATCAGGCTGTGGCAGGCCTCACTGGTAAT...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTATGGTCCCAACCTTTTaGTCCACCCCCTTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCMVPTF*STPFSV
Trigger: AACAGAGAAGGGGGTGGAGCAAAAGGTTGGGACCAT...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp GCTGCCACTAACACCTGTGTCAGAACTACTGTAAGGACCCTTTCCTCCTGCGAGCTCCAGTGGTATGCATaGTATGCTTGGGGACCCTGG +
Preference number: 2 (lower is better)
Translates to: AATNTCVRTTVRTLSSCELQWYA*YAWGPW
Trigger: CCAGGGTCCCCAAGCATAGCATGCATACCACTGGAG...CTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGACACAGGTGTTAGTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR CCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCACACCCACCACTCACTTaGGGGCTGGAGGCATTGCAC +
Preference number: 2 (lower is better)
Translates to: PLLTPDRPQMRFRILHPAHPPLT*GLEALH
Trigger: GTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTG...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATAAGGCCCCATCAGCATaGCTGGGGTGGAGATCTTGG +
Preference number: 2 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHKAPSA*LGWRSW
Trigger: CCAAGATCTCCACCCCAGTCATGCTGATGGGGCCTT...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAGAGGCATTGCACGCATaGGGGGCATGTGGGACTTGT +
Preference number: 2 (lower is better)
Translates to: PLLTPDRPQMRFRILHPAEALHA*GACGTC
Trigger: ACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTC...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp GCTGCCACTAACACCTGTGTCAGAACTACTGTAAGGACCCTTTCCTCCTGCGAGGAAGCCACCTGGGACTaGACAGTATGTCTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: AATNTCVRTTVRTLSSCEEATWD*TVCLCV
Trigger: CACACACAGACATACTGTGCAGTCCCAGGTGGCTTC...CTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGACACAGGTGTTAGTGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR CAA 90 bp TCACAGCCGACACTCTTGACCAGTGAGTCCTCTCTCCTCCCTTTGTaGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: SQPTLLTSESSLLPL*TPDRPQMRFRILHP
Trigger: TGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR CAA 90 bp GTGTCACAGCCGACACTCTTGACCAGTGAGTCCTCTCTCCTCCCTTaGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCAT +
Preference number: 2 (lower is better)
Translates to: VSQPTLLTSESSLLP*LTPDRPQMRFRILH
Trigger: ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAACTTGTGGGGGCAGCTaGGCAGCGAGGTTTATAGAG +
Preference number: 2 (lower is better)
Translates to: PLLTPDRPQMRFRILHPATCGGS*AARFIE
Trigger: CTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGT...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCTACGAGATGCTGTGCTaGCCACGGTTACTCAGTGCC +
Preference number: 2 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILYEMLC*PRLLSA
Trigger: GGCACTGAGTAACCGTGGTCAGCACAGCATCTCGTA...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR GCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTATTACCAGTGAGGCCTaGCACAGCCTGATTTGTACT +
Preference number: 2 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLITSEA*HSLICT
Trigger: AGTACAAATCAGGCTGTGGCAGGCCTCACTGGTAAT...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATTCATCATCAGCACAGTaGGGGGCACATGGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHSSSAQ*GAHGGH
Trigger: ATGCCCACCATGTGCCCCGCACTGTGCTGATGATGA...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
3UTR-3UTR CCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCTGTCTGAAACTGGGTTaGCAGGCTCAGGGCATAGCC +
Preference number: 2 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILCLKLG*QAQGIA
Trigger: GGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACA...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCTTTTCCATTACCAGTaGGGCCTGCCACAGCCTGAT +
Preference number: 2 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILLFHYQ*GLPQPD
Trigger: ATCAGGCTGTGGCAGGCCTCACTGGTAATGGAAAAG...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCACTCTCCTCCCTTTGTTaGCTCCTGACCGTCCACAAA +
Preference number: 2 (lower is better)
Translates to: PLLTPDRPQMRFRILHPALSSLC*LLTVHK
Trigger: TTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAG...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR TCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAGACACTCTTGACCAGTaGGTCCTCTCTCCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: PLLTPDRPQMRFRILHPADTLDQ*VLSPPF
Trigger: AAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGTC...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCGGAACCAGGTCTGATTaGCTCTGTGTCCCCAGATAC +
Preference number: 2 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILGTRSD*LCVPRY
Trigger: GTATCTGGGGACACAGAGGCAATCAGACCTGGTTCC...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp TGTCAGAACTACTGTAAGGACCCTTTCCTCCTGCGAGAGGAGAACAGTGCTAAACAGTATGTCTGTGTGTaGCTTGATCGCATCACCCCC +
Preference number: 2 (lower is better)
Translates to: CQNYCKDPFLLREENSAKQYVCV*LDRITP
Trigger: GGGGGTGATGCGATCAAGGCACACACAGACATACTG...TTTAGCACTGTTCTCCTCTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR TCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAAGGAAGGATGAAGGATaGGTGTCTGAAACTGGGTTG +
Preference number: 2 (lower is better)
Translates to: PLLTPDRPQMRFRILHPARKDEG*VSETGL
Trigger: CAACCCAGTTTCAGACACTCATCCTTCATCCTTCCT...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR GCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATATTACCAGTGAGGCCTaGCACAGCCTGATTTGTACT +
Preference number: 2 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHITSEA*HSLICT
Trigger: AGTACAAATCAGGCTGTGGCAGGCCTCACTGGTAAT...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCAATCATGTTCTCTGTaGAGCGGCCAATCTGGAACA +
Preference number: 2 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILQSCSL*SGQSGT
Trigger: TGTTCCAGATTGGCCGCTCCACAGAGAACATGATTG...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGTCTTCCCTGGTCACATaGTCCCAACCTTTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWSSLVT*SQPFAP
Trigger: TGGAGCAAAAGGTTGGGACCATGTGACCAGGGAAGA...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
3UTR-3UTR CCA 90 bp GTGATAGACATGCTACAAACTGCCAACCCTTTAGGCTATAAACTGCTCACACATTATGCTTGGGGACCCTaGTCTGTCTGCCTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: VIDMLQTANPLGYKLLTHYAWGP*SVCLSV
Trigger: CACAGACAGGCAGACAGACCAGGGTCCCCAAGCATA...ATGTGTGAGCAGTTTATAGCCTAAAGGGTTGGCAGTTTGTAGCATGTCTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR GCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGCGCATGAAGCCGTGTTaGCATTTGTTAACAGTCTGT +
Preference number: 2 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWRMKPC*HLLTVC
Trigger: ACAGACTGTTAACAAATGGCAACACGGCTTCATGCG...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
3UTR GCA 72 bp CGCGCTGCATTTGCCTCCTGCCGCTGGGCCTCCAGTTaGTTCAGTGTGGGAGCCCGCAGCAGCCCCGCCGGT +
Preference number: 3 (lower is better)
Translates to: RAAFASCRWASS*FSVGARSSPAG
Trigger: ACCGGCGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAATGCAGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CAA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCGGGGCCGCGCTGCATTaGCCTCCTGCCGCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: PWGWAFLHRPRTELVLKAGAALH*PPAAGP
Trigger: AGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCC...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR GCA 72 bp GCTGAGGCCCACGGGGCACTGGGGCCGCGCTGCATTTaGCTCCTGCCGCTGGGCCTCCAGTTGCTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: AEAHGALGPRCI*LLPLGLQLLQC
Trigger: ACACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGCCCCGTGGGCCTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR CCA 72 bp TTCTCAGAGCAGACGTGGCCGCAAGGTGCAAAGGCATaGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCGGCC +
Preference number: 3 (lower is better)
Translates to: FSEQTWPQGAKA*LGGPGSRQRPA
Trigger: GGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTCTGCTCTGAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CAA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAGGGGCCGCGCTGCATTaGCCTCCTGCCGCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPGAALH*PPAAGP
Trigger: AGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCC...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CAA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCATGGGGGCTGGAGGCATaGCACGCATGCGGGGCATGT +
Preference number: 3 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAWGLEA*HACGAC
Trigger: ACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCA...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGCCACCCACCACTCACTaGGGGGCTGGAGGCATTGCA +
Preference number: 3 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRPPTTH*GAGGIA
Trigger: TGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCCCGCTGGGCCTCCAGTaGCTTCAGTGTGGGAGCCCG +
Preference number: 3 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGPLGLQ*LQCGSP
Trigger: CGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGG...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CAA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTACCCAGGGCTGCTGTTaGTCGGGCGCTGTGCGGCCA +
Preference number: 3 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLTQGCC*SGAVRP
Trigger: TGGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGT...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR CCA 72 bp GCAGGCGGCATGGAAAGCATGGGTGCCGTGGGGCAGTaGTGTCTGGGCCCAGTAGCGGGCAGTCTTCTCAGA +
Preference number: 3 (lower is better)
Translates to: AGGMESMGAVGQ*CLGPVAGSLLR
Trigger: TCTGAGAAGACTGCCCGCTACTGGGCCCAGACACCACTGCCCCACGGCACCCATGCTTTCCATGCCGCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CAA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCACGGGGCATGTGGGACTaGTGGGGGCAGCTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPRGMWD*WGQLSS
Trigger: GCTGCTCAGCTGCCCCCACAAGTCCCACATGCCCCG...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp GTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCCTGCCACAGCCTGATTaGTACTCTGATCCTGGCACG +
Preference number: 3 (lower is better)
Translates to: VAARCKGMARRPRVQAEALPQPD*YSDPGT
Trigger: CGTGCCAGGATCAGAGTACAAATCAGGCTGTGGCAG...GGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CAA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCATCGTTTTCCACCAGCTaGCCCCGCTGCTGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAASFSTS*PRCWAE
Trigger: CTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGA...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR CCA 72 bp ATCGAAGCCAGCGGCATAGATGCGGGCAGTATAGGGTaGCCGGCGGTCACAGAGGATGCGGCAGGCATAGCG +
Preference number: 3 (lower is better)
Translates to: IEASGIDAGSIG*PAVTEDAAGIA
Trigger: CGCTATGCCTGCCGCATCCTCTGTGACCGCCGGCCACCCTATACTGCCCGCATCTATGCCGCTGGCTTCGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CAA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGGTGTCTGAAACTGGGTaGGCAGGCTCAGGGCATAGC +
Preference number: 3 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRVSETG*AGSGHS
Trigger: GCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACAC...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGTGTCTGAAACTGGGTaGGCAGGCTCAGGGCATAGC +
Preference number: 3 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAVSETG*AGSGHS
Trigger: GCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACAC...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGCGGGGCATGTGGGACTaGTGGGGGCAGCTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVRGMWD*WGQLSS
Trigger: GCTGCTCAGCTGCCCCCACAAGTCCCACATGCCCCG...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAAACCCAGGGCTGCTGTTaGTCGGGCGCTGTGCGGCCA +
Preference number: 3 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKTQGCC*SGAVRP
Trigger: TGGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGT...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CAA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCGTGTCTGAAACTGGGTaGGCAGGCTCAGGGCATAGC +
Preference number: 3 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGVSETG*AGSGHS
Trigger: GCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACAC...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCATCACAGCCGACACTCTaGACCAGTGAGTCCTCTCTC +
Preference number: 3 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAASQPTL*TSESSL
Trigger: GAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTGA...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR TCA 72 bp GGACTCGTTTTCCACCAGCTTGCCCCGCTGCTGGGCTaGGCGGCTGTCCCGCAATGTGTACACATTCCCACA +
Preference number: 3 (lower is better)
Translates to: GLVFHQLAPLLG*AAVPQCVHIPT
Trigger: TGTGGGAATGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR GCA 72 bp GCATCACCCCCTGGACCTCCAGTGGTATGCATGCTATaGTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGG +
Preference number: 3 (lower is better)
Translates to: ASPPGPPVVCML*LGTLVCLPVCG
Trigger: CCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGGAGGTCCAGGGGGTGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR CAA 90 bp GAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACCACCCACCACTCACTaGGGGGCTGGAGGCATTGCA +
Preference number: 3 (lower is better)
Translates to: EPVHRPSLLYRARFPSCGPPTTH*GAGGIA
Trigger: TGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG...TCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGCTGCCACAGCCTGATTaGTACTCTGATCCTGGCACG +
Preference number: 3 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVLPQPD*YSDPGT
Trigger: CGTGCCAGGATCAGAGTACAAATCAGGCTGTGGCAG...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCTCACAGCCGACACTCTaGACCAGTGAGTCCTCTCTC +
Preference number: 3 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGSQPTL*TSESSL
Trigger: GAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTGA...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR TCA 72 bp GTGCTCATGCCAGAGAAGAGCAGTGCATGGCCAGTTTaGGGAGCACGGCCATGTGACCTTGGACAGCCCCTG +
Preference number: 3 (lower is better)
Translates to: VLMPEKSSAWPV*GARPCDLGQPL
Trigger: CAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCTTCTCTGGCATGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR GCA 72 bp GCCTTGATCGCATCACCCCCTGGACCTCCAGTGGTATaGATGCTATGCTTGGGGACCCTGGTCTGTCTGCCT +
Preference number: 3 (lower is better)
Translates to: ALIASPPGPPVV*MLCLGTLVCLP
Trigger: AGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGGAGGTCCAGGGGGTGATGCGATCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR CCA 72 bp CACCCCCTGGACCTCCAGTGGTATGCATGCTATGCTTaGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAA +
Preference number: 3 (lower is better)
Translates to: HPLDLQWYACYA*GPWSVCLSVGQ
Trigger: TTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGGAGGTCCAGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR CCA 72 bp GACTCCATTGGTGGTCAGTCCATCCATCAGGCCATCTaGGGTCCGCCATTTGGCCGCTCGCTCTCCAAGGAA +
Preference number: 3 (lower is better)
Translates to: DSIGGQSIHQAI*GPPFGRSLSKE
Trigger: TTCCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAGATGGCCTGATGGATGGACTGACCACCAATGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR CCA 72 bp ACGTTGGACTCGTTTTCCACCAGCTTGCCCCGCTGCTaGGCTGAGCGGCTGTCCCGCAATGTGTACACATTC +
Preference number: 3 (lower is better)
Translates to: TLDSFSTSLPRC*AERLSRNVYTF
Trigger: GAATGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGAGTCCAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR-3UTR CAA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCGTGTCTGAAACTGGGTaGGCAGGCTCAGGGCATAGC +
Preference number: 3 (lower is better)
Translates to: LLREASLTFPLPVRPATAVSETG*AGSGHS
Trigger: GCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACAC...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTTCTCTCCTCCCTTTGTaGACTCCTGACCGTCCACAA +
Preference number: 3 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLSLLPL*TPDRPQ
Trigger: TTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTCTCTCCTCCCTTTGTaGACTCCTGACCGTCCACAA +
Preference number: 3 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLSLLPL*TPDRPQ
Trigger: TTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
3UTR-3UTR CAA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCACCGCTGGGCCTCCAGTaGCTTCAGTGTGGGAGCCCG +
Preference number: 3 (lower is better)
Translates to: PLLTPDRPQMRFRILHPAPLGLQ*LQCGSP
Trigger: CGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGG...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
3UTR-3UTR CAA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCACGCATGAAGCCGTGTaGCCATTTGTTAACAGTCTG +
Preference number: 3 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGTHEAV*PFVNSL
Trigger: CAGACTGTTAACAAATGGCAACACGGCTTCATGCGT...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCATCTCCAAGGAAGATGTaGCTAGAGGCATCGAAGCCA +
Preference number: 3 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPSPRKM*LEASKP
Trigger: TGGCTTCGATGCCTCTAGCAACATCTTCCTTGGAGA...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR TCA 72 bp AGCCATCCTGACTCTGTCCCTGGATTTCTGGCTTACTaGCACCTGAGCCTGTGCACAGGCCCTCCCTTCTGT +
Preference number: 3 (lower is better)
Translates to: SHPDSVPGFLAY*HLSLCTGPPFC
Trigger: ACAGAAGGGAGGGCCTGTGCACAGGCTCAGGTGTCAGTAAGCCAGAAATCCAGGGACAGAGTCAGGATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR TCA 72 bp GAGTGGCTCCGGGACAGTGTATACGAGATGCTGTGCTaGCCACGGTTACTCAGTGCCTGGTGGGGAGAAAAA +
Preference number: 3 (lower is better)
Translates to: EWLRDSVYEMLC*PRLLSAWWGEK
Trigger: TTTTTCTCCCCACCAGGCACTGAGTAACCGTGGTCAGCACAGCATCTCGTATACACTGTCCCGGAGCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR CCA 72 bp CAGTATGTCTGTGTGTGCCTTGATCGCATCACCCCCTaGACCTCCAGTGGTATGCATGCTATGCTTGGGGAC +
Preference number: 3 (lower is better)
Translates to: QYVCVCLDRITP*TSSGMHAMLGD
Trigger: GTCCCCAAGCATAGCATGCATACCACTGGAGGTCCAGGGGGTGATGCGATCAAGGCACACACAGACATACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR CAA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCACGCATGAAGCCGTGTaGCCATTTGTTAACAGTCTG +
Preference number: 3 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGTHEAV*PFVNSL
Trigger: CAGACTGTTAACAAATGGCAACACGGCTTCATGCGT...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp GCTGCCACTAACACCTGTGTCAGAACTACTGTAAGGACCCTTTCCTCCTGCGAGGTATGCATGCTATGCTaGGGGACCCTGGTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: AATNTCVRTTVRTLSSCEVCMLC*GTLVCL
Trigger: CAGACAGACCAGGGTCCCCAAGCATAGCATGCATAC...CTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGACACAGGTGTTAGTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR CAA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATGTGTCTGAAACTGGGTaGGCAGGCTCAGGGCATAGC +
Preference number: 3 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHVSETG*AGSGHS
Trigger: GCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACAC...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR TCA 72 bp TCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTaGGGCCTGCCACAGCCTGATTTGTACTCTGATCCT +
Preference number: 3 (lower is better)
Translates to: SSVKPPSLFHYQ*GLPQPDLYSDP
Trigger: AGGATCAGAGTACAAATCAGGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR-3UTR CAA 90 bp CCTTTAGGCTATAAACTGCTCACACATGGGCCAAGTGTCACTCTCATAAGAAGGAAGCTGCCAGCAGCCTaGAAGCCACCTGGGACTGCA +
Preference number: 3 (lower is better)
Translates to: PLGYKLLTHGPSVTLIRRKLPAA*KPPGTA
Trigger: TGCAGTCCCAGGTGGCTTCAAGGCTGCTGGCAGCTT...CCTTCTTATGAGAGTGACACTTGGCCCATGTGTGAGCAGTTTATAGCCTAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR-3UTR CAA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGCTGCCACAGCCTGATTaGTACTCTGATCCTGGCACG +
Preference number: 3 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWLPQPD*YSDPGT
Trigger: CGTGCCAGGATCAGAGTACAAATCAGGCTGTGGCAG...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
3UTR TCA 72 bp ACATGTCTGTGTCGCTATCATGTGTATACTCCACTATaGCCGAGTGGCTCCGGGACAGTGTATACGAGATGC +
Preference number: 3 (lower is better)
Translates to: TCLCRYHVYTPL*PSGSGTVYTRC
Trigger: GCATCTCGTATACACTGTCCCGGAGCCACTCGGTCATAGTGGAGTATACACATGATAGCGACACAGACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
3UTR GCA 72 bp ACCTGTGTCAGAACTACTGTAAGGACCCTTTCCTCCTaGGAGAGGAGAACAGTGCTAAACCTGTCTGAACGT +
Preference number: 3 (lower is better)
Translates to: TCVRTTVRTLSS*ERRTVLNLSER
Trigger: ACGTTCAGACAGGTTTAGCACTGTTCTCCTCTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGACACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCGACCAGCTTGCCCCGCTaGTGGGCTGAGCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PRSPARHPGLSPRRSRLPTSLPR*WAERLS
Trigger: GGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGT...CGGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CCA 90 bp GTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCAGCTTGCCCCGCTGCTaGGCTGAGCGGCTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: VAARCKGMARRPRVQAEASLPRC*AERLSR
Trigger: GCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCT...GGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR TCA 90 bp CTGCCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGGGAAGGCCAGAGTGCTaGGGCCCACGGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LPPTHHSLGGWRHCTHAGGRPEC*GPRGTG
Trigger: CCCAGTGCCCCGTGGGCCTCAGCACTCTGGCCTTCC...CCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCTTCACCCCGTTGGCGTaGGACCGGCGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VAARCKGMARRPRVQAEAFTPLA*DRRLSA
Trigger: GGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAA...GGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR GCA 90 bp ACCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCAGGCGGACGCAGCCATaGTCGCCGGTAAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TEISRQTPGAESSEKPPARRTQP*SPVSQA
Trigger: GGCCTGGCTTACCGGCGAGCATGGCTGCGTCCGCCT...GGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR TCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGGGAAGGCCAGAGTGCTaGGGCCCACGGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLGRPEC*GPRGTG
Trigger: CCCAGTGCCCCGTGGGCCTCAGCACTCTGGCCTTCC...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTGCCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGACCAGCTTGCCCCGCTaGTGGGCTGAGCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LPPTHHSLGGWRHCTHAGTSLPR*WAERLS
Trigger: GGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGT...CCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TGGACTCGTTTTCCACCAGCTTGCCCCGCTGCTGGGCTGAGCGGCTGTCCCGCAGGGCCGCGCTGCATTTaGCTCCTGCCGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: WTRFPPACPAAGLSGCPAGPRCI*LLPLGL
Trigger: GAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCC...TGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGAGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR GCA 90 bp CCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCGGCCGACGTGGCCGCAAGGTaGAAAGGCATGGCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: PQGAKAWLGGPGSRQRPADVAAR*KGMARR
Trigger: CCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTC...GGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR CCA 90 bp CCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCGGCGGCATGGAAAGCATaGGTGCCGTGGGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PRSPARHPGLSPRRSRLPAAWKA*VPWGSG
Trigger: ACCACTGCCCCACGGCACCCATGCTTTCCATGCCGC...CGGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR TCA 90 bp GCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCAGACACCCGGGGCTaGGTCCTCGGAGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: AMGLGFPPSTQDRAGAEGPDTRG*VLGEAA
Trigger: GGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGG...GCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGCCCCGCTGCTGGGCTaGGCGGCTGTCCCGCAATGT +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELAPLLG*AAVPQC
Trigger: ACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGC...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTGCCCCGCTGCTGGGCTaGGCGGCTGTCCCGCAATGT +
Preference number: 4 (lower is better)
Translates to: PPLTWGLEALHACGACGTAPLLG*AAVPQC
Trigger: ACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGC...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CTGCCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGGCGGGCCCTGGAAAATaGGGCGGACGCAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: LPPTHHSLGGWRHCTHAGAGPGK*GGRSHA
Trigger: AGCATGGCTGCGTCCGCCTCATTTTCCAGGGCCCGC...CCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GAGCAGACGTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGGCGGGCCCTGGAAAATaGGGCGGACGCAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: EQTWPQGAKAWLGGPGSRAGPGK*GGRSHA
Trigger: AGCATGGCTGCGTCCGCCTCATTTTCCAGGGCCCGC...CCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR TCA 90 bp ACGGGGCACTGGGGCCGCGCTGCATTTGCCTCCTGCCGCTGGGCCTCCAGTTGCTGGCTTACTGACACCTaGGCCTGTGCACAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TGHWGRAAFASCRWASSCWLTDT*ACAQAL
Trigger: GAGGGCCTGTGCACAGGCTCAGGTGTCAGTAAGCCA...GCAACTGGAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGCCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR GCA 90 bp CCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCGGCCAGCCAGCGGCATAGATaGGGGCAGTATAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PQGAKAWLGGPGSRQRPASQRHR*GQYRVA
Trigger: GGCCACCCTATACTGCCCGCATCTATGCCGCTGGCT...GGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR GCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGGCAGCCCCGCCGGTGTaGGCCACAGCAGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGAAPPV*ATAVWP
Trigger: GGGCCACACTGCTGTGGCGCACACCGGCGGGGCTGC...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp ACAGAGGATGCGGCAGGCATAGCGGGAGATGGTGCTCTGGGCAGAAGGGCCCTCGTTTGTCGGGCGCTGTaGGGCCACGGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TEDAAGIAGDGALGRRALVCRAL*GHGLGW
Trigger: CCAGCCCAGCCCGTGGCCGCACAGCGCCCGACAAAC...GAGGGCCCTTCTGCCCAGAGCACCATCTCCCGCTATGCCTGCCGCATCCTCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR GCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTTTGTCGGGCGCTGTaGGGCCACGGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELVCRAL*GHGLGW
Trigger: CCAGCCCAGCCCGTGGCCGCACAGCGCCCGACAAAC...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGAAGGCAAAGGGGGTGTaGGGCAGCGGTGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLKAKGV*GSGGGR
Trigger: CCGGCCTCCACCGCTGCCGCACACCCCCTTTGCCTT...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618547.4
CDS-3UTR CCA 90 bp ACGGGGCACTGGGGCCGCGCTGCATTTGCCTCCTGCCGCTGGGCCTCCAGTTGCGTGGTGCATGACGTCTaGCTTCACCCCGTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: TGHWGRAAFASCRWASSCVVHDV*LHPVGV
Trigger: CACGCCAACGGGGTGAAGCCAGACGTCATGCACCAC...GCAACTGGAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGCCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CCA 90 bp GTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCCTGGGGTCCGCCATTTaGCCGCTCGCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: VAARCKGMARRPRVQAEALGSAI*PLALQG
Trigger: TCCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAG...GGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR CCA 90 bp GCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCAGCTTGCCCCGCTGCTaGGCTGAGCGGCTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: AMGLGFPPSTQDRAGAEGSLPRC*AERLSR
Trigger: GCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCT...GCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGAGGCCCACGGGGCACTaGGGCCGCGCTGCATTTGCC +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELRPTGH*GRAAFA
Trigger: GGCAAATGCAGCGCGGCCCCAGTGCCCCGTGGGCCT...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGTGTGCGGCCACGGGCTaGGCTGGGGAAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRCAATG*AGEGQS
Trigger: ACTCTGGCCTTCCCCAGCCCAGCCCGTGGCCGCACA...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGGGTGCCGTGGGGCAGTaGTGTCTGGGCCCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLGAVGQ*CLGPVA
Trigger: CGCTACTGGGCCCAGACACCACTGCCCCACGGCACC...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GTGCCCGCAGCGGACGTAGACCCAGGGCTGCTGTTTGTCGGGCGCTGTGCGGCCTGGAGATGTGGTGCATaGCGTCTGGCTTCACCCCGT +
Preference number: 4 (lower is better)
Translates to: VPAADVDPGLLFVGRCAAWRCGA*RLASPR
Trigger: ACGGGGTGAAGCCAGACGTCATGCACCACATCTCCA...GGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGTCTACGTCCGCTGCGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR TCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGCCAGACACCCGGGGCTaGGTCCTCGGAGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRPDTRG*VLGEAA
Trigger: GGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGG...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTCCAGACACCCGGGGCTaGGTCCTCGGAGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLPDTRG*VLGEAA
Trigger: GGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGG...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGGCCCCGCTGCTGGGCTaGGCGGCTGTCCCGCAATGT +
Preference number: 4 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGAPLLG*AAVPQC
Trigger: ACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGC...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCGGAAGGCCAGAGTGCTaGGGCCCACGGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGGRPEC*GPRGTG
Trigger: CCCAGTGCCCCGTGGGCCTCAGCACTCTGGCCTTCC...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGGGAAGGCCAGAGTGCTaGGGCCCACGGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRGRPEC*GPRGTG
Trigger: CCCAGTGCCCCGTGGGCCTCAGCACTCTGGCCTTCC...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGGAAGGCCAGAGTGCTaGGGCCCACGGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLGRPEC*GPRGTG
Trigger: CCCAGTGCCCCGTGGGCCTCAGCACTCTGGCCTTCC...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGTTCACCCCGTTGGCGTaGGACCGGCGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELFTPLA*DRRLSA
Trigger: GGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAA...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR GCA 90 bp GTGCCCGCAGCGGACGTAGACCCAGGGCTGCTGTTTGTCGGGCGCTGTGCGGCCGGCGTGGAGATGTGGTaGATGACGTCTGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: VPAADVDPGLLFVGRCAAGVEMW*MTSGFT
Trigger: GGTGAAGCCAGACGTCATGCACCACATCTCCACGCC...GGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGTCTACGTCCGCTGCGGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR GCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAGCAGCCCCGCCGGTGTaGGCCACAGCAGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPAAPPV*ATAVWP
Trigger: GGGCCACACTGCTGTGGCGCACACCGGCGGGGCTGC...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCCGCTGGGCCTCCAGTTaGTTCAGTGTGGGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCRWASS*FSVGAR
Trigger: GCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCG...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTGCACTGGGGCCGCGCTaGATTTGCCTCCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PPLTWGLEALHACGACGTALGPR*ICLLPL
Trigger: CAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGC...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGGTTTGTCGGGCGCTGTaGGGCCACGGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRVCRAL*GHGLGW
Trigger: CCAGCCCAGCCCGTGGCCGCACAGCGCCCGACAAAC...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGCGGCACGATGTGGGATaGCCCAGGAAGGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWRHDVG*PRKGKA
Trigger: GGCCTTGCCCTTCCTGGGGCATCCCACATCGTGCCG...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGGGGGCTGGAGGCATTaGACGCATGCGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWGGWRH*THAGHV
Trigger: CACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCC...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCACTTCCAGCACCATTCTaGCCACGCTCCGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAALPAPF*PRSGPR
Trigger: GCGGGGCCCGGAGCGTGGCCAGAATGGTGCTGGAAG...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CCA 90 bp GTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCTGCCTCAGCTTGCCCCGCTGCTaGGCTGAGCGGCTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: VHGQFEEHGHVTLDSPCLSLPRC*AERLSR
Trigger: GCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCT...GAGGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGCCAGTTGCTTCAGTGTaGGAGCCCGCAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWPVASV*EPAAAP
Trigger: CGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGG...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTAGGCCCACGGGGCACTaGGGCCGCGCTGCATTTGCC +
Preference number: 4 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLRPTGH*GRAAFA
Trigger: GGCAAATGCAGCGCGGCCCCAGTGCCCCGTGGGCCT...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCTGTGCGGCCACGGGCTaGGCTGGGGAAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: PWGWAFLHRPRTELVLKACAATG*AGEGQS
Trigger: ACTCTGGCCTTCCCCAGCCCAGCCCGTGGCCGCACA...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCGGCCCGTCCTGCAGCACGTTaGACTCGTTTTCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: PQGAKAWLGGPGSRQRPARPAAR*TRFPPA
Trigger: GGCAGGTGGAAAACGAGTCCAACGTGCTGCAGGACG...GGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528752.1
CDS-3UTR TCA 90 bp CCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCGACTTGTGGGGGCAGCTaGGCAGCGAGGTTTATAGAG +
Preference number: 4 (lower is better)
Translates to: PRSPARHPGLSPRRSRLPTCGGS*AARFIE
Trigger: CTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGT...CGGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR TCA 90 bp CTGCCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGTGGCTTACTGACACCTaGGCCTGTGCACAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPPTHHSLGGWRHCTHAGWLTDT*ACAQAL
Trigger: GAGGGCCTGTGCACAGGCTCAGGTGTCAGTAAGCCA...CCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGGCTCCTCGCCTGGCTaGGCATCTTCACCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELGSSPG*ASSPGE
Trigger: CTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCC...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTGCCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGAAGCCGCCTGCCGGGTaGATCACCAGGACTCCATTG +
Preference number: 4 (lower is better)
Translates to: LPPTHHSLGGWRHCTHAGKPPAG*ITRTPL
Trigger: CAATGGAGTCCTGGTGATGCACCCGGCAGGCGGCTT...CCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACAGCAGCCCCGCCGGTGTaGGCCACAGCAGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SPSNMSIWCGCASRECPTAAPPV*ATAVWP
Trigger: GGGCCACACTGCTGTGGCGCACACCGGCGGGGCTGC...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGGGGCCGCGCTGCATTTaGCTCCTGCCGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: EGHSPSNMSIWCGCASREGPRCI*LLPLGL
Trigger: GAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCC...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGCACTGGGGCCGCGCTaGATTTGCCTCCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLALGPR*ICLLPL
Trigger: CAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGC...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGGCACTGGGGCCGCGCTaGATTTGCCTCCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRALGPR*ICLLPL
Trigger: CAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGC...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGGTTTGTCGGGCGCTGTaGGGCCACGGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EGHSPSNMSIWCGCASREVCRAL*GHGLGW
Trigger: CCAGCCCAGCCCGTGGCCGCACAGCGCCCGACAAAC...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGGACGTGGCCGCAAGGTaGAAAGGCATGGCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRDVAAR*KGMARR
Trigger: CCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTC...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGAGGCGGACGCAGCCATaGTCGCCGGTAAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGRRTQP*SPVSQA
Trigger: GGCCTGGCTTACCGGCGAGCATGGCTGCGTCCGCCT...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CACAGACCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCAGGGAGTGTCCCACATaGAGAGCTCCCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HRPRSPARHPGLSPRRSRRECPT*RAPSGL
Trigger: CAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCT...GCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR GCA 90 bp CCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCGGCCTCATCATCAGCACAGTaGGGGGCACATGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PQGAKAWLGGPGSRQRPASSSAQ*GAHGGH
Trigger: ATGCCCACCATGTGCCCCGCACTGTGCTGATGATGA...GGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528752.1
CDS-3UTR GCA 90 bp GTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCTGCCTCGGCCACCTACCAGCTTaGCCCGCTGCTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VHGQFEEHGHVTLDSPCLGHLPA*PAAGLS
Trigger: GCTCAGCCCAGCAGCGGGGCAAGCTGGTAGGTGGCC...GAGGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CTGCCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGAGGCATAGCGGGAGATaGTGCTCTGGGCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LPPTHHSLGGWRHCTHAGRHSGR*CSGQKG
Trigger: GCCCTTCTGCCCAGAGCACCATCTCCCGCTATGCCT...CCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGACTCGTTTTCCACCAGCTTGCCCCGCTGCTGGGCTGAGCGGCTGTCCCGCACTGGGGTCCGCCATTTaGCCGCTCGCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: WTRFPPACPAAGLSGCPALGSAI*PLALQG
Trigger: TCCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAG...TGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CCA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGAGCTTGCCCCGCTGCTaGGCTGAGCGGCTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: EGHSPSNMSIWCGCASRESLPRC*AERLSR
Trigger: GCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCT...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCGCGTCCTGCAGCACGTTaGACTCGTTTTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PRSPARHPGLSPRRSRLPRPAAR*TRFPPA
Trigger: AGCTGGTGGAAAACGAGTCCAACGTGCTGCAGGACG...CGGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAAGGCCCACGGGGCACTaGGGCCGCGCTGCATTTGCC +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPRPTGH*GRAAFA
Trigger: GGCAAATGCAGCGCGGCCCCAGTGCCCCGTGGGCCT...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCAGGCCCACGGGGCACTaGGGCCGCGCTGCATTTGCC +
Preference number: 4 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLRPTGH*GRAAFA
Trigger: GGCAAATGCAGCGCGGCCCCAGTGCCCCGTGGGCCT...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR CCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCCAAGGTGCAAAGGCATaGCTAGGCGGCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCQGAKA*LGGPGS
Trigger: GGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTG...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGGGTGCCGTGGGGCAGTaGTGTCTGGGCCCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRGAVGQ*CLGPVA
Trigger: CGCTACTGGGCCCAGACACCACTGCCCCACGGCACC...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGGGTGCCGTGGGGCAGTaGTGTCTGGGCCCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVGAVGQ*CLGPVA
Trigger: CGCTACTGGGCCCAGACACCACTGCCCCACGGCACC...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGGCGGCATGGAAAGCATaGGTGCCGTGGGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLAAWKA*VPWGSG
Trigger: ACCACTGCCCCACGGCACCCATGCTTTCCATGCCGC...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCGCGGCATGGAAAGCATaGGTGCCGTGGGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCAAWKA*VPWGSG
Trigger: ACCACTGCCCCACGGCACCCATGCTTTCCATGCCGC...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAAGGGGCAGGCGGCATaGAAAGCATGGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCKGQAA*KAWVPW
Trigger: CCACGGCACCCATGCTTTCCATGCCGCCTGCCCCTT...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCCCCCATCAGCATGACTaGGGTGGAGATCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VAARCKGMARRPRVQAEAPHQHD*GGDLGD
Trigger: GTCCCCAAGATCTCCACCCCAGTCATGCTGATGGGG...GGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR CCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGGCAAGGCCATGGGGCTaGGCTTTCCTCCATCGACCC +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLARPWG*AFLHRP
Trigger: GGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGC...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGTCGGCGGCACGATGTaGGATGCCCCAGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAVGGTM*DAPGRA
Trigger: TGCCCTTCCTGGGGCATCCCACATCGTGCCGCCGAC...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GAGCAGACGTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCACCCACCACTCACTTaGGGGCTGGAGGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: EQTWPQGAKAWLGGPGSRHPPLT*GLEALH
Trigger: GTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTG...CCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR CCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGGTGTGCGGCAGCGGTaGAGGCCGGGGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLGVRQR*RPGKAA
Trigger: AGCTGCTTTCCCCGGCCTCCACCGCTGCCGCACACC...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618547.4
CDS-3UTR TCA 90 bp GTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCGTGTATACTCCACTATaGCCGAGTGGCTCCGGGACA +
Preference number: 4 (lower is better)
Translates to: VAARCKGMARRPRVQAEAVYTPL*PSGSGT
Trigger: TGTCCCGGAGCCACTCGGTCATAGTGGAGTATACAC...GGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR TCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCCCAGACACCCGGGGCTaGGTCCTCGGAGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATAPDTRG*VLGEAA
Trigger: GGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGG...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGGCGGGCCCTGGAAAATaGGGCGGACGCAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGAGPGK*GGRSHA
Trigger: AGCATGGCTGCGTCCGCCTCATTTTCCAGGGCCCGC...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGGAGGCTGAGCTCCTATaGCACCTCCTCCGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLEAELL*HLLREA
Trigger: GGCTTCACGGAGGAGGTGTCATAGGAGCTCAGCCTC...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGAGGCTGAGCTCCTATaGCACCTCCTCCGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWEAELL*HLLREA
Trigger: GGCTTCACGGAGGAGGTGTCATAGGAGCTCAGCCTC...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCGGCCCTCTCCTCCCTTTGTTaGCTCCTGACCGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: PQGAKAWLGGPGSRQRPALSSLC*LLTVHK
Trigger: TTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAG...GGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR TCA 90 bp CCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCGGACACTCTTGACCAGTaGGTCCTCTCTCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: PRSPARHPGLSPRRSRLPDTLDQ*VLSPPF
Trigger: AAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGTC...CGGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR TCA 90 bp GAGCAGACGTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGGTGGGCATTCAGGGATaGTGGCCCTTGTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: EQTWPQGAKAWLGGPGSRVGIQG*WPLCHS
Trigger: GCTGTGACACAAGGGCCATCATCCCTGAATGCCCAC...CCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR TCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGCCGGGGGAGGGGGATaGGCGCGAACAGCCACGCTC +
Preference number: 4 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVAGGGG*ARTATL
Trigger: GAGCGTGGCTGTTCGCGCTCATCCCCCTCCCCCGGC...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000349459.10
CDS-3UTR GCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCACCCTTGTTCCCCCGGTaGTGGAGGTCTGAGGTTCGG +
Preference number: 4 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAPLFPR*WRSEVR
Trigger: CCGAACCTCAGACCTCCAGCACCGGGGGAACAAGGG...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTCCCTTGTTCCCCCGGTaGTGGAGGTCTGAGGTTCGG +
Preference number: 4 (lower is better)
Translates to: PPLTWGLEALHACGACGTPLFPR*WRSEVR
Trigger: CCGAACCTCAGACCTCCAGCACCGGGGGAACAAGGG...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCCACCAGCTTGCCCCGCTGCTGGGCTGAGCGGCTGTCCCGCAATGTGTACACAGGCGGTCACAGAGGATaGGGCAGGCATAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: STSLPRCWAERLSRNVYTGGHRG*GRHSGR
Trigger: TCTCCCGCTATGCCTGCCGCATCCTCTGTGACCGCC...TGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR GCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGAAGCCGCCTGCCGGGTaGATCACCAGGACTCCATTG +
Preference number: 4 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWKPPAG*ITRTPL
Trigger: CAATGGAGTCCTGGTGATGCACCCGGCAGGCGGCTT...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAACCAGCTTGCCCCGCTaGTGGGCTGAGCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGTSLPR*WAERLS
Trigger: GGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGT...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGACCAGCTTGCCCCGCTaGTGGGCTGAGCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: EGHSPSNMSIWCGCASRETSLPR*WAERLS
Trigger: GGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGT...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGCAGCCCCGCCGGTGTaGGCCACAGCAGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCAAPPV*ATAVWP
Trigger: GGGCCACACTGCTGTGGCGCACACCGGCGGGGCTGC...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCCGCTGGGCCTCCAGTTaGTTCAGTGTGGGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGRWASS*FSVGAR
Trigger: GCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCG...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGCGCTGGGCCTCCAGTTaGTTCAGTGTGGGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQRWASS*FSVGAR
Trigger: GCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCG...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGCACTGGGGCCGCGCTaGATTTGCCTCCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGALGPR*ICLLPL
Trigger: CAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGC...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGAGGCGGACGCAGCCATaGTCGCCGGTAAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GFPPSTQDRAGAEGPISMRRTQP*SPVSQA
Trigger: GGCCTGGCTTACCGGCGAGCATGGCTGCGTCCGCCT...CATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGCGGCACGATGTGGGATaGCCCAGGAAGGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRRHDVG*PRKGKA
Trigger: GGCCTTGCCCTTCCTGGGGCATCCCACATCGTGCCG...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGGTGCTAGGCCCAGCCTaGCACCCACCCACCACTCAC +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRVLGPA*HPPTTH
Trigger: GTGAGTGGTGGGTGGGTGGCAGGCTGGGCCTAGCAC...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGGTGCTAGGCCCAGCCTaGCACCCACCCACCACTCAC +
Preference number: 4 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVVLGPA*HPPTTH
Trigger: GTGAGTGGTGGGTGGGTGGCAGGCTGGGCCTAGCAC...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCAGACTCCGCCTCTTaGGGCGATGCTCAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: AMGLGFPPSTQDRAGAEGPDSAS*GDAQPS
Trigger: CGAAGGCTGAGCATCGCCGCAAGAGGCGGAGTCTGG...GCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349459.10
CDS-3UTR CCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGGATGGGCTCCTCGCCTaGCTGCGCATCTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVDGLLA*LRIFTG
Trigger: CCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATC...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCGGTGGAGCGGCCAATCTaGAACATGTCTGTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: PRSPARHPGLSPRRSRLPVERPI*NMSVSL
Trigger: TAGCGACACAGACATGTTCCAGATTGGCCGCTCCAC...CGGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGCATAGCGGGAGATaGTGCTCTGGGCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCRHSGR*CSGQKG
Trigger: GCCCTTCTGCCCAGAGCACCATCTCCCGCTATGCCT...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGATCCATCAGGCCATCTaGGGTCCGCCATTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLIHQAI*GPPFGR
Trigger: GCGGCCAAATGGCGGACCCCAGATGGCCTGATGGAT...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGCCAGTTGCTTCAGTGTaGGAGCCCGCAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRPVASV*EPAAAP
Trigger: CGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGG...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTGCGGCCACGGGCTaGGCTGGGGAAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: EGHSPSNMSIWCGCASRECAATG*AGEGQS
Trigger: ACTCTGGCCTTCCCCAGCCCAGCCCGTGGCCGCACA...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTCAGAGGCCGGCCTCCTaGCCAAGCCATAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: PPLTWGLEALHACGACGTQRPAS*PSHRGT
Trigger: TGTGCCTCTATGGCTTGGCCAGGAGGCCGGCCTCTG...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAGGTGCCGTGGGGCAGTaGTGTCTGGGCCCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPGAVGQ*CLGPVA
Trigger: CGCTACTGGGCCCAGACACCACTGCCCCACGGCACC...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCAAAGCATGGGTGCCGTaGGGCAGTGGTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AMGLGFPPSTQDRAGAEGKAWVP*GSGVWA
Trigger: GGCCCAGACACCACTGCCCCACGGCACCCATGCTTT...GCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTCGGCGGCACGATGTaGGATGCCCCAGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLVGGTM*DAPGRA
Trigger: TGCCCTTCCTGGGGCATCCCACATCGTGCCGCCGAC...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGGTCGGCGGCACGATGTaGGATGCCCCAGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRVGGTM*DAPGRA
Trigger: TGCCCTTCCTGGGGCATCCCACATCGTGCCGCCGAC...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCGGCATGTGGGACTTGTaGGGGCAGCTGAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PWGWAFLHRPRTELVLKAGMWDL*GQLSSE
Trigger: CTCGCTGCTCAGCTGCCCCCACAAGTCCCACATGCC...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGCACTCACTTGGGGGCTaGAGGCATTGCACGCATGCG +
Preference number: 4 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRHSLGG*RHCTHA
Trigger: CGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTCCAGACACCCGGGGCTaGGTCCTCGGAGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCPDTRG*VLGEAA
Trigger: GGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGG...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACCAGACACCCGGGGCTaGGTCCTCGGAGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: QWYACYAWGPWSVCLSVGPDTRG*VLGEAA
Trigger: GGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGG...TCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp CAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGAGCCCCGCTGCTGGGCTaGGCGGCTGTCCCGCAATGT +
Preference number: 4 (lower is better)
Translates to: QWYACYAWGPWSVCLSVGAPLLG*AAVPQC
Trigger: ACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGC...TCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAAGCCCCGCTGCTGGGCTaGGCGGCTGTCCCGCAATGT +
Preference number: 4 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKAPLLG*AAVPQC
Trigger: ACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGC...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp TGGACTCGTTTTCCACCAGCTTGCCCCGCTGCTGGGCTGAGCGGCTGTCCCGCAAAGGCCCCATCAGCATaGCTGGGGTGGAGATCTTGG +
Preference number: 4 (lower is better)
Translates to: WTRFPPACPAAGLSGCPAKAPSA*LGWRSW
Trigger: CCAAGATCTCCACCCCAGTCATGCTGATGGGGCCTT...TGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR TCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCATGGCTTACTGACACCTaGGCCTGTGCACAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAWLTDT*ACAQAL
Trigger: GAGGGCCTGTGCACAGGCTCAGGTGTCAGTAAGCCA...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCCACAGCCGACACTCTTaGCCAGTGAGTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCHSRHS*PVSPLS
Trigger: GGAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTG...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGTGGGCATTCAGGGATaGTGGCCCTTGTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWVGIQG*WPLCHS
Trigger: GCTGTGACACAAGGGCCATCATCCCTGAATGCCCAC...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCTGCCTCGGGCCTGGGATTCCCTaGTATGGAGCCTGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: VHGQFEEHGHVTLDSPCLGPGIP*YGACWG
Trigger: GCCCCAACAGGCTCCATATCAGGGAATCCCAGGCCC...GAGGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAGGCTCCTCGCCTGGCTaGGCATCTTCACCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPGSSPG*ASSPGE
Trigger: CTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCC...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGGGCTCCTCGCCTGGCTaGGCATCTTCACCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GFPPSTQDRAGAEGPISMGSSPG*ASSPGE
Trigger: CTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCC...CATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGGCTCCTCGCCTGGCTaGGCATCTTCACCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGGSSPG*ASSPGE
Trigger: CTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCC...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAAGCCAGCGGCATAGATaGGGGCAGTATAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAASQRHR*GQYRVA
Trigger: GGCCACCCTATACTGCCCGCATCTATGCCGCTGGCT...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAAAGCCGCCTGCCGGGTaGATCACCAGGACTCCATTG +
Preference number: 4 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAKPPAG*ITRTPL
Trigger: CAATGGAGTCCTGGTGATGCACCCGGCAGGCGGCTT...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGCGTTTTCCACCAGCTTaGCCCGCTGCTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRRFPPA*PAAGLS
Trigger: GCTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACG...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCCGCAATGTGTACACATTCCCACAGACCGAGATCTCCCGCCAGACACCCGGGGCGTTTTCCACCAGCTTaGCCCGCTGCTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PAMCTHSHRPRSPARHPGRFPPA*PAAGLS
Trigger: GCTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACG...CCCCGGGTGTCTGGCGGGAGATCTCGGTCTGTGGGAATGTGTACACATTGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR GCA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGCGTTTTCCACCAGCTTaGCCCGCTGCTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQRFPPA*PAAGLS
Trigger: GCTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACG...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTGCAGCCCCGCCGGTGTaGGCCACAGCAGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLAAPPV*ATAVWP
Trigger: GGGCCACACTGCTGTGGCGCACACCGGCGGGGCTGC...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGGGCCGCGCTGCATTTaGCTCCTGCCGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVGPRCI*LLPLGL
Trigger: GAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCC...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAAGTTTGTCGGGCGCTGTaGGGCCACGGGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKVCRAL*GHGLGW
Trigger: CCAGCCCAGCCCGTGGCCGCACAGCGCCCGACAAAC...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCAGGCGGACGCAGCCATaGTCGCCGGTAAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGRRTQP*SPVSQA
Trigger: GGCCTGGCTTACCGGCGAGCATGGCTGCGTCCGCCT...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGACGGCACGATGTGGGATaGCCCAGGAAGGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGRHDVG*PRKGKA
Trigger: GGCCTTGCCCTTCCTGGGGCATCCCACATCGTGCCG...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCGAGGCATTGCACGCATaGGGGGCATGTGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCEALHA*GACGTC
Trigger: ACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTC...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGAGGCATTGCACGCATaGGGGGCATGTGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWEALHA*GACGTC
Trigger: ACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTC...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGGGGGGCTGGAGGCATTaGACGCATGCGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: GFPPSTQDRAGAEGPISMGGWRH*THAGHV
Trigger: CACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCC...CATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GTGCCCGCAGCGGACGTAGACCCAGGGCTGCTGTTTGTCGGGCGCTGTGCGGCCATGGTCCCAACCTTTTaGTCCACCCCCTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: VPAADVDPGLLFVGRCAAMVPTF*STPFSV
Trigger: AACAGAGAAGGGGGTGGAGCAAAAGGTTGGGACCAT...GGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGTCTACGTCCGCTGCGGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR GCA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTACAGCTTGCCCCGCTaGTGGGCTGAGCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLYSLPR*WAERLS
Trigger: GGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGTA...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528752.1
CDS-3UTR CCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCTTGTTCCCCCGGTGCTaGAGGTCTGAGGTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGLFPRC*RSEVRG
Trigger: CCCCCGAACCTCAGACCTCCAGCACCGGGGGAACAA...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCGCAGCTGTGTGCCCTTaGGCCAGTCACTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: AMGLGFPPSTQDRAGAEGAAVCP*ASHFPS
Trigger: AGAGGGGAAGTGACTGGCCCAAGGGCACACAGCTGC...GCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320740.12
CDS-3UTR CCA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGCGGGCAGTATAGGGTaGCCGGCGGTCACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQAGSIG*PAVTED
Trigger: ATCCTCTGTGACCGCCGGCCACCCTATACTGCCCGC...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGCGGGCAGTATAGGGTaGCCGGCGGTCACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLAGSIG*PAVTED
Trigger: ATCCTCTGTGACCGCCGGCCACCCTATACTGCCCGC...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGCTGGGGTCCGCCATTTaGCCGCTCGCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRLGSAI*PLALQG
Trigger: TCCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAG...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAAAGCTTGCCCCGCTGCTaGGCTGAGCGGCTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKSLPRC*AERLSR
Trigger: GCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCT...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTGCCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCGTCCTGCAGCACGTTaGACTCGTTTTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LPPTHHSLGGWRHCTHAGRPAAR*TRFPPA
Trigger: AGCTGGTGGAAAACGAGTCCAACGTGCTGCAGGACG...CCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGACCAGTTGCTTCAGTGTaGGAGCCCGCAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGPVASV*EPAAAP
Trigger: CGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGG...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGCCAGTTGCTTCAGTGTaGGAGCCCGCAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: EGHSPSNMSIWCGCASREPVASV*EPAAAP
Trigger: CGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGG...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGAGGCCCACGGGGCACTaGGGCCGCGCTGCATTTGCC +
Preference number: 4 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVRPTGH*GRAAFA
Trigger: GGCAAATGCAGCGCGGCCCCAGTGCCCCGTGGGCCT...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGCAGAGGCCGGCCTCCTaGCCAAGCCATAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGQRPAS*PSHRGT
Trigger: TGTGCCTCTATGGCTTGGCCAGGAGGCCGGCCTCTG...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCCAAGGTGCAAAGGCATaGCTAGGCGGCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGQGAKA*LGGPGS
Trigger: GGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTG...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGCAAGGTGCAAAGGCATaGCTAGGCGGCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGQGAKA*LGGPGS
Trigger: GGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTG...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCAAAGCATGGGTGCCGTaGGGCAGTGGTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLKAWVP*GSGVWA
Trigger: GGCCCAGACACCACTGCCCCACGGCACCCATGCTTT...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAAAGCATGGGTGCCGTaGGGCAGTGGTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGKAWVP*GSGVWA
Trigger: GGCCCAGACACCACTGCCCCACGGCACCCATGCTTT...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGCGGCATGGAAAGCATaGGTGCCGTGGGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLAAWKA*VPWGSG
Trigger: ACCACTGCCCCACGGCACCCATGCTTTCCATGCCGC...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGAAGGGGCAGGCGGCATaGAAAGCATGGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVKGQAA*KAWVPW
Trigger: CCACGGCACCCATGCTTTCCATGCCGCCTGCCCCTT...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAAGGGGCAGGCGGCATaGAAAGCATGGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGKGQAA*KAWVPW
Trigger: CCACGGCACCCATGCTTTCCATGCCGCCTGCCCCTT...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGATGCAGAGCTCCCTCTaGGCTGCAGGAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQMQSSL*AAGGGD
Trigger: GTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCAT...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGATGCAGAGCTCCCTCTaGGCTGCAGGAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVMQSSL*AAGGGD
Trigger: GTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCAT...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGCATGTCCATCTGGTGTaGCTGTGCCAGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLHVHLV*LCQQGV
Trigger: CACTCCCTGCTGGCACAGCCACACCAGATGGACATG...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCCATGTCCATCTGGTGTaGCTGTGCCAGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCHVHLV*LCQQGV
Trigger: CACTCCCTGCTGGCACAGCCACACCAGATGGACATG...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTGCCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGTCCAACATGTCCATCTaGTGTGGCTGTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPPTHHSLGGWRHCTHAGSNMSI*CGCASR
Trigger: CCTGCTGGCACAGCCACACCAGATGGACATGTTGGA...CCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCGCAAGGCCATGGGGCTaGGCTTTCCTCCATCGACCC +
Preference number: 4 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLARPWG*AFLHRP
Trigger: GGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGC...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCGTCGGCGGCACGATGTaGGATGCCCCAGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLVGGTM*DAPGRA
Trigger: TGCCCTTCCTGGGGCATCCCACATCGTGCCGCCGAC...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCGGCATGTGGGACTTGTaGGGGCAGCTGAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGGMWDL*GQLSSE
Trigger: CTCGCTGCTCAGCTGCCCCCACAAGTCCCACATGCC...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp ACGGGGCACTGGGGCCGCGCTGCATTTGCCTCCTGCCGCTGGGCCTCCAGTTGCATCCAGCATCTTCCCTaGTCACATGGTCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: TGHWGRAAFASCRWASSCIQHLP*SHGPNL
Trigger: AAGGTTGGGACCATGTGACCAGGGAAGATGCTGGAT...GCAACTGGAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR TCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGTGGAGATGTGGTGCATaGCGTCTGGCTTCACCCCGT +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELWRCGA*RLASPR
Trigger: ACGGGGTGAAGCCAGACGTCATGCACCACATCTCCA...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR TCA 90 bp GCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCAAGGCCCCATCAGCATaGCTGGGGTGGAGATCTTGG +
Preference number: 4 (lower is better)
Translates to: AMGLGFPPSTQDRAGAEGKAPSA*LGWRSW
Trigger: CCAAGATCTCCACCCCAGTCATGCTGATGGGGCCTT...GCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGACTTGTGGGGGCAGCTaGGCAGCGAGGTTTATAGAG +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLTCGGS*AARFIE
Trigger: CTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGT...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCGAGGCTGAGCTCCTATaGCACCTCCTCCGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGEAELL*HLLREA
Trigger: GGCTTCACGGAGGAGGTGTCATAGGAGCTCAGCCTC...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCCGCAATGTGTACACATTCCCACAGACCGAGATCTCCCGCCAGACACCCGGGGTGGCTTACTGACACCTaGGCCTGTGCACAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PAMCTHSHRPRSPARHPGWLTDT*ACAQAL
Trigger: GAGGGCCTGTGCACAGGCTCAGGTGTCAGTAAGCCA...CCCCGGGTGTCTGGCGGGAGATCTCGGTCTGTGGGAATGTGTACACATTGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR TCA 90 bp ACCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCCTGCCCTGACCGTCCACAAATaGGGTTCAGAATCCTCCATC +
Preference number: 4 (lower is better)
Translates to: TEISRQTPGAESSEKPPALTVHK*GSESSI
Trigger: GATGGAGGATTCTGAACCTCATTTGTGGACGGTCAG...GGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR TCA 90 bp TCCACCAGCTTGCCCCGCTGCTGGGCTGAGCGGCTGTCCCGCAATGTGTACACACACAGCCGACACTCTTaGCCAGTGAGTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: STSLPRCWAERLSRNVYTHSRHS*PVSPLS
Trigger: GGAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTG...TGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR TCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCACACAGCCGACACTCTTaGCCAGTGAGTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAHSRHS*PVSPLS
Trigger: GGAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTG...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTGTGGGCATTCAGGGATaGTGGCCCTTGTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PPLTWGLEALHACGACGTVGIQG*WPLCHS
Trigger: GCTGTGACACAAGGGCCATCATCCCTGAATGCCCAC...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCGTGGGCATTCAGGGATaGTGGCCCTTGTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PWGWAFLHRPRTELVLKAVGIQG*WPLCHS
Trigger: GCTGTGACACAAGGGCCATCATCCCTGAATGCCCAC...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGACCCTTGTTCCCCCGGTaGTGGAGGTCTGAGGTTCGG +
Preference number: 4 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGPLFPR*WRSEVR
Trigger: CCGAACCTCAGACCTCCAGCACCGGGGGAACAAGGG...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGATTCACCCCGTTGGCGTaGGACCGGCGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: EPVHRPSLLYRARFPSCGFTPLA*DRRLSA
Trigger: GGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAA...TCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR GCA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGGGCGGTCACAGAGGATaGGGCAGGCATAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: EGHSPSNMSIWCGCASREGGHRG*GRHSGR
Trigger: TCTCCCGCTATGCCTGCCGCATCCTCTGTGACCGCC...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAGGCGGTCACAGAGGATaGGGCAGGCATAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPGGHRG*GRHSGR
Trigger: TCTCCCGCTATGCCTGCCGCATCCTCTGTGACCGCC...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGAGCCAGCGGCATAGATaGGGGCAGTATAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVSQRHR*GQYRVA
Trigger: GGCCACCCTATACTGCCCGCATCTATGCCGCTGGCT...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGAAGCCGCCTGCCGGGTaGATCACCAGGACTCCATTG +
Preference number: 4 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVKPPAG*ITRTPL
Trigger: CAATGGAGTCCTGGTGATGCACCCGGCAGGCGGCTT...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CAGAGAAGAGCAGTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACACCAGCTTGCCCCGCTaGTGGGCTGAGCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QRRAVHGQFEEHGHVTLDTSLPR*WAERLS
Trigger: GGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGT...GTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCTTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCCGCTGGGCCTCCAGTTaGTTCAGTGTGGGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATARWASS*FSVGAR
Trigger: GCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCG...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAAGCACTGGGGCCGCGCTaGATTTGCCTCCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKALGPR*ICLLPL
Trigger: CAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGC...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGAAGGCGGACGCAGCCATaGTCGCCGGTAAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EPVHRPSLLYRARFPSCGRRTQP*SPVSQA
Trigger: GGCCTGGCTTACCGGCGAGCATGGCTGCGTCCGCCT...TCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGGGAGTGTCCCACATaGAGAGCTCCCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGRECPT*RAPSGL
Trigger: CAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCT...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCCGGCACGATGTGGGATaGCCCAGGAAGGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATARHDVG*PRKGKA
Trigger: GGCCTTGCCCTTCCTGGGGCATCCCACATCGTGCCG...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCGTGCTAGGCCCAGCCTaGCACCCACCCACCACTCAC +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATAVLGPA*HPPTTH
Trigger: GTGAGTGGTGGGTGGGTGGCAGGCTGGGCCTAGCAC...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTGCCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGGGAACCAGGTCTGATTaGCTCTGTGTCCCCAGATAC +
Preference number: 4 (lower is better)
Translates to: LPPTHHSLGGWRHCTHAGGTRSD*LCVPRY
Trigger: GTATCTGGGGACACAGAGGCAATCAGACCTGGTTCC...CCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp ACGGGGCACTGGGGCCGCGCTGCATTTGCCTCCTGCCGCTGGGCCTCCAGTTGCATTACCAGTGAGGCCTaGCACAGCCTGATTTGTACT +
Preference number: 4 (lower is better)
Translates to: TGHWGRAAFASCRWASSCITSEA*HSLICT
Trigger: AGTACAAATCAGGCTGTGGCAGGCCTCACTGGTAAT...GCAACTGGAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR GCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGGCCCTTGTCCCCACTTaGCAGACAACCATTGTAGCC +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLALVPT*QTTIVA
Trigger: GGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGC...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CCA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAACTTCCAGCACCATTCTaGCCACGCTCCGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKLPAPF*PRSGPR
Trigger: GCGGGGCCCGGAGCGTGGCCAGAATGGTGCTGGAAG...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CCA 90 bp CAGAGAAGAGCAGTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACCTTCCAGCACCATTCTaGCCACGCTCCGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: QRRAVHGQFEEHGHVTLDLPAPF*PRSGPR
Trigger: GCGGGGCCCGGAGCGTGGCCAGAATGGTGCTGGAAG...GTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCTTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CCAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGGATGGGCTCCTCGCCTaGCTGCGCATCTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: PVVCMLCLGTLVCLPVCGDGLLA*LRIFTG
Trigger: CCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATC...CCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCGTGGTGCATGACGTCTaGCTTCACCCCGTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLVVHDV*LHPVGV
Trigger: CACGCCAACGGGGTGAAGCCAGACGTCATGCACCAC...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCGTGGTGCATGACGTCTaGCTTCACCCCGTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGVVHDV*LHPVGV
Trigger: CACGCCAACGGGGTGAAGCCAGACGTCATGCACCAC...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTGGTTACTCAGTGCCTTaGAGACGAGCGGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PPLTWGLEALHACGACGTGYSVP*RRAAWR
Trigger: TCTCCACGCCGCTCGTCTCCAAGGCACTGAGTAACC...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000618547.4
CDS-3UTR CCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGGTTACTCAGTGCCTTaGAGACGAGCGGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELGYSVP*RRAAWR
Trigger: TCTCCACGCCGCTCGTCTCCAAGGCACTGAGTAACC...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000618547.4
CDS-3UTR CCA 90 bp CACAGACCGAGATCTCCCGCCAGACACCCGGGGCTGAGTCCTCGGAGAAGCCGCTCCACTATGACCGAGTaGCTCCGGGACAGTGTATAC +
Preference number: 4 (lower is better)
Translates to: HRPRSPARHPGLSPRRSRSTMTE*LRDSVY
Trigger: GTATACACTGTCCCGGAGCCACTCGGTCATAGTGGA...GCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATCTCGGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGGCATAGCGGGAGATaGTGCTCTGGGCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGRHSGR*CSGQKG
Trigger: GCCCTTCTGCCCAGAGCACCATCTCCCGCTATGCCT...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGCTGGGGTCCGCCATTTaGCCGCTCGCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: EGHSPSNMSIWCGCASRELGSAI*PLALQG
Trigger: TCCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAG...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCATCCATCAGGCCATCTaGGGTCCGCCATTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLIHQAI*GPPFGR
Trigger: GCGGCCAAATGGCGGACCCCAGATGGCCTGATGGAT...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGCGTCCTGCAGCACGTTaGACTCGTTTTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLRPAAR*TRFPPA
Trigger: AGCTGGTGGAAAACGAGTCCAACGTGCTGCAGGACG...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTTTGCCTCCTGCCGCTaGGCCTCCAGTTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PPLTWGLEALHACGACGTFASCR*ASSCFS
Trigger: ACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAA...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCTTTGCCTCCTGCCGCTaGGCCTCCAGTTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: AMGLGFPPSTQDRAGAEGFASCR*ASSCFS
Trigger: ACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAA...GCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGTGTGCGGCCACGGGCTaGGCTGGGGAAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQCAATG*AGEGQS
Trigger: ACTCTGGCCTTCCCCAGCCCAGCCCGTGGCCGCACA...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGCAAGGTGCAAAGGCATaGCTAGGCGGCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GFPPSTQDRAGAEGPISMQGAKA*LGGPGS
Trigger: GGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTG...CATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGGTGCCGTGGGGCAGTaGTGTCTGGGCCCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVGAVGQ*CLGPVA
Trigger: CGCTACTGGGCCCAGACACCACTGCCCCACGGCACC...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAGCGGCATGGAAAGCATaGGTGCCGTGGGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPAAWKA*VPWGSG
Trigger: ACCACTGCCCCACGGCACCCATGCTTTCCATGCCGC...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCAAGGGGCAGGCGGCATaGAAAGCATGGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLKGQAA*KAWVPW
Trigger: CCACGGCACCCATGCTTTCCATGCCGCCTGCCCCTT...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR CCA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGATGCAGAGCTCCCTCTaGGCTGCAGGAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: EGHSPSNMSIWCGCASREMQSSL*AAGGGD
Trigger: GTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCAT...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGTCCAACATGTCCATCTaGTGTGGCTGTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRSNMSI*CGCASR
Trigger: CCTGCTGGCACAGCCACACCAGATGGACATGTTGGA...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTCCCCATCAGCATGACTaGGGTGGAGATCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PPLTWGLEALHACGACGTPHQHD*GGDLGD
Trigger: GTCCCCAAGATCTCCACCCCAGTCATGCTGATGGGG...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGGGCATGTGGGACTTGTaGGGGCAGCTGAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GFPPSTQDRAGAEGPISMGMWDL*GQLSSE
Trigger: CTCGCTGCTCAGCTGCCCCCACAAGTCCCACATGCC...CATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAGGCATGTGGGACTTGTaGGGGCAGCTGAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPGMWDL*GQLSSE
Trigger: CTCGCTGCTCAGCTGCCCCCACAAGTCCCACATGCC...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCCACTCACTTGGGGGCTaGAGGCATTGCACGCATGCG +
Preference number: 4 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLHSLGG*RHCTHA
Trigger: CGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGCACTCACTTGGGGGCTaGAGGCATTGCACGCATGCG +
Preference number: 4 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQHSLGG*RHCTHA
Trigger: CGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGCACCCACCACTCACTTaGGGGCTGGAGGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQHPPLT*GLEALH
Trigger: GTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTG...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTGCCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCCAGCACCATTCATCTaGGGACGCCACGCAATTAGA +
Preference number: 4 (lower is better)
Translates to: LPPTHHSLGGWRHCTHAGPAPFI*GRHAIR
Trigger: TCTAATTGCGTGGCGTCCCCAGATGAATGGTGCTGG...CCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618547.4
CDS-3UTR TCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGCGGGCCCTGGAAAATaGGGCGGACGCAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVAGPGK*GGRSHA
Trigger: AGCATGGCTGCGTCCGCCTCATTTTCCAGGGCCCGC...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGACTTGTGGGGGCAGCTaGGCAGCGAGGTTTATAGAG +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELTCGGS*AARFIE
Trigger: CTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGT...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGCTTTTCCATTACCAGTaGGGCCTGCCACAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRLFHYQ*GLPQPD
Trigger: ATCAGGCTGTGGCAGGCCTCACTGGTAATGGAAAAG...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGATGGCTTACTGACACCTaGGCCTGTGCACAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGWLTDT*ACAQAL
Trigger: GAGGGCCTGTGCACAGGCTCAGGTGTCAGTAAGCCA...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGGACACTCTTGACCAGTaGGTCCTCTCTCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRDTLDQ*VLSPPF
Trigger: AAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGTC...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGGTGGGCATTCAGGGATaGTGGCCCTTGTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVVGIQG*WPLCHS
Trigger: GCTGTGACACAAGGGCCATCATCCCTGAATGCCCAC...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGAAGGAGCACGGCCATGTaGCCTTGGACAGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QWYACYAWGPWSVCLSVGRSTAM*PWTAPA
Trigger: GGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCT...TCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGATTGTAGCAGCTGTGTaGCCTTGGGCCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: PPTTHLGAGGIARMRGMWIVAAV*PWASHF
Trigger: GAAGTGACTGGCCCAAGGGCACACAGCTGCTACAAT...CCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320740.12
CDS-3UTR GCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGGGCGTGGAGATGTGGTaGATGACGTCTGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGGVEMW*MTSGFT
Trigger: GGTGAAGCCAGACGTCATGCACCACATCTCCACGCC...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR GCA 90 bp CCAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGGGCGGTCACAGAGGATaGGGCAGGCATAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PVVCMLCLGTLVCLPVCGGGHRG*GRHSGR
Trigger: TCTCCCGCTATGCCTGCCGCATCCTCTGTGACCGCC...CCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCCGTTTTCCACCAGCTTaGCCCGCTGCTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATARFPPA*PAAGLS
Trigger: GCTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACG...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAACGCTGGGCCTCCAGTTaGTTCAGTGTGGGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKRWASS*FSVGAR
Trigger: GCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCG...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGAGGGAGTGTCCCACATaGAGAGCTCCCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EGHSPSNMSIWCGCASRERECPT*RAPSGL
Trigger: CAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCT...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGGAGGCATTGCACGCATaGGGGGCATGTGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGEALHA*GACGTC
Trigger: ACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTC...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCCACCAGCTTGCCCCGCTGCTGGGCTGAGCGGCTGTCCCGCAATGTGTACACAGCCCTTGTCCCCACTTaGCAGACAACCATTGTAGCC +
Preference number: 4 (lower is better)
Translates to: STSLPRCWAERLSRNVYTALVPT*QTTIVA
Trigger: GGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGC...TGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CCA 90 bp GAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGAGATGGGCTCCTCGCCTaGCTGCGCATCTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: EPVHRPSLLYRARFPSCGDGLLA*LRIFTG
Trigger: CCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATC...TCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGGATGGGCTCCTCGCCTaGCTGCGCATCTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQDGLLA*LRIFTG
Trigger: CCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATC...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTCTGGCTTCACCCCGTTaGCGTGCGACCGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLLASPR*RATGGS
Trigger: TGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAG...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACAGCGGGCAGTATAGGGTaGCCGGCGGTCACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: SPSNMSIWCGCASRECPTAGSIG*PAVTED
Trigger: ATCCTCTGTGACCGCCGGCCACCCTATACTGCCCGC...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGATCCATCAGGCCATCTaGGGTCCGCCATTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GFPPSTQDRAGAEGPISMIHQAI*GPPFGR
Trigger: GCGGCCAAATGGCGGACCCCAGATGGCCTGATGGAT...CATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCCAGAGGCCGGCCTCCTaGCCAAGCCATAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGQRPAS*PSHRGT
Trigger: TGTGCCTCTATGGCTTGGCCAGGAGGCCGGCCTCTG...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCCAAGGTGCAAAGGCATaGCTAGGCGGCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATAQGAKA*LGGPGS
Trigger: GGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTG...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCTTCTCAGAGCAGACGTaGCCGCAAGGTGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PWGWAFLHRPRTELVLKAFSEQT*PQGAKA
Trigger: TGCCTTTGCACCTTGCGGCCACGTCTGCTCTGAGAA...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGCATGTCCATCTGGTGTaGCTGTGCCAGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRHVHLV*LCQQGV
Trigger: CACTCCCTGCTGGCACAGCCACACCAGATGGACATG...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp AGGCATCGAAGCCAGCGGCATAGATGCGGGCAGTATAGGGTGGCCGGCGGTCACTCCAACATGTCCATCTaGTGTGGCTGTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RHRSQRHRCGQYRVAGGHSNMSI*CGCASR
Trigger: CCTGCTGGCACAGCCACACCAGATGGACATGTTGGA...GTGACCGCCGGCCACCCTATACTGCCCGCATCTATGCCGCTGGCTTCGATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGCAAGGCCATGGGGCTaGGCTTTCCTCCATCGACCC +
Preference number: 4 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGARPWG*AFLHRP
Trigger: GGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGC...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCGCAAGGCCATGGGGCTaGGCTTTCCTCCATCGACCC +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATAARPWG*AFLHRP
Trigger: GGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGC...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAAGTCGGCGGCACGATGTaGGATGCCCCAGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKVGGTM*DAPGRA
Trigger: TGCCCTTCCTGGGGCATCCCACATCGTGCCGCCGAC...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAATAGCCAGCCTAAGCTaGGGGTCAAAGGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPIASLS*GSKAPG
Trigger: GCCAGGGGCCTTTGACCCCCAGCTTAGGCTGGCTAT...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAAGTGGCTCATGCTTGGGCAGGGGGATaGGCAGCTTGTGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CYAWGPWSVCLSVGQVAHAWAGG*AACEGL
Trigger: CAGGCCCTCACAAGCTGCCCATCCCCCTGCCCAAGC...ATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp GTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCTGCCTCAGAACCCCCTGGGCCTaGGATTCCCTGATATGGAGC +
Preference number: 4 (lower is better)
Translates to: VHGQFEEHGHVTLDSPCLRTPWA*DSLIWS
Trigger: GCTCCATATCAGGGAATCCCAGGCCCAGGGGGTTCT...GAGGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTACGAGATGCTGTGCTaGCCACGGTTACTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLYEMLC*PRLLSA
Trigger: GGCACTGAGTAACCGTGGTCAGCACAGCATCTCGTA...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAAAGGCCCCATCAGCATaGCTGGGGTGGAGATCTTGG +
Preference number: 4 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGKAPSA*LGWRSW
Trigger: CCAAGATCTCCACCCCAGTCATGCTGATGGGGCCTT...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGACTTGTGGGGGCAGCTaGGCAGCGAGGTTTATAGAG +
Preference number: 4 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGTCGGS*AARFIE
Trigger: CTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGT...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCTTTTCCATTACCAGTaGGGCCTGCCACAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: AMGLGFPPSTQDRAGAEGLFHYQ*GLPQPD
Trigger: ATCAGGCTGTGGCAGGCCTCACTGGTAATGGAAAAG...GCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCACTCTCCTCCCTTTGTTaGCTCCTGACCGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAALSSLC*LLTVHK
Trigger: TTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAG...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCTCTCCTCCCTTTGTTaGCTCCTGACCGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: PWGWAFLHRPRTELVLKALSSLC*LLTVHK
Trigger: TTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAG...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGACACTCTTGACCAGTaGGTCCTCTCTCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELDTLDQ*VLSPPF
Trigger: AAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGTC...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGAGGGATGGGCAGCTTGTaGGGGCCTGGCAAGGATAGG +
Preference number: 4 (lower is better)
Translates to: QWYACYAWGPWSVCLSVGGMGSL*GPGKDR
Trigger: CCTATCCTTGCCAGGCCCTCACAAGCTGCCCATCCC...TCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCATGGTCCCAACCTTTTaGTCCACCCCCTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCMVPTF*STPFSV
Trigger: AACAGAGAAGGGGGTGGAGCAAAAGGTTGGGACCAT...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGAAAGGGCCTTACAGCTTaGCCCGCTGCTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: EPVHRPSLLYRARFPSCGKGLTA*PAAGLS
Trigger: GCTCAGCCCAGCAGCGGGGCAAGCTGTAAGGCCCTT...TCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528752.1
CDS-3UTR CCA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCTCCACTATGACCGAGTaGCTCCGGGACAGTGTATAC +
Preference number: 4 (lower is better)
Translates to: PWGWAFLHRPRTELVLKASTMTE*LRDSVY
Trigger: GTATACACTGTCCCGGAGCCACTCGGTCATAGTGGA...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCGTGGAGCGGCCAATCTaGAACATGTCTGTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: AMGLGFPPSTQDRAGAEGVERPI*NMSVSL
Trigger: TAGCGACACAGACATGTTCCAGATTGGCCGCTCCAC...GCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTGGGGTCCGCCATTTaGCCGCTCGCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: EPVHRPSLLYRARFPSCGLGSAI*PLALQG
Trigger: TCCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAG...TCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCATCCATCAGGCCATCTaGGGTCCGCCATTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATAIHQAI*GPPFGR
Trigger: GCGGCCAAATGGCGGACCCCAGATGGCCTGATGGAT...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGCCAGGACTCCATTGGTaGTCAGTCCATCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQPGLHW*SVHPSG
Trigger: GCCTGATGGATGGACTGACCACCAATGGAGTCCTGG...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CGAGTGGCTCCGGGACAGTGTATACGAGATGCTGTGCTGACCACGGTTACTCAGCAGAGGCCGGCCTCCTaGCCAAGCCATAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: RVAPGQCIRDAVLTTVTQQRPAS*PSHRGT
Trigger: TGTGCCTCTATGGCTTGGCCAGGAGGCCGGCCTCTG...CTGAGTAACCGTGGTCAGCACAGCATCTCGTATACACTGTCCCGGAGCCACTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGTTCTCAGAGCAGACGTaGCCGCAAGGTGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRFSEQT*PQGAKA
Trigger: TGCCTTTGCACCTTGCGGCCACGTCTGCTCTGAGAA...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGATGCAGAGCTCCCTCTaGGCTGCAGGAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVMQSSL*AAGGGD
Trigger: GTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCAT...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGATGCAGAGCTCCCTCTaGGCTGCAGGAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQMQSSL*AAGGGD
Trigger: GTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCAT...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTCCAACATGTCCATCTaGTGTGGCTGTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLSNMSI*CGCASR
Trigger: CCTGCTGGCACAGCCACACCAGATGGACATGTTGGA...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCATAGCCAGCCTAAGCTaGGGGTCAAAGGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATAIASLS*GSKAPG
Trigger: GCCAGGGGCCTTTGACCCCCAGCTTAGGCTGGCTAT...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCTGTCTGAAACTGGGTTaGCAGGCTCAGGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGCLKLG*QAQGIA
Trigger: GGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACA...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGTGTCTGAAACTGGGTTaGCAGGCTCAGGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRCLKLG*QAQGIA
Trigger: GGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACA...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGTGTCTGAAACTGGGTTaGCAGGCTCAGGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVCLKLG*QAQGIA
Trigger: GGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACA...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTTGTCTGAAACTGGGTTaGCAGGCTCAGGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLCLKLG*QAQGIA
Trigger: GGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACA...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCATCCAGCATCTTCCCTaGTCACATGGTCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCIQHLP*SHGPNL
Trigger: AAGGTTGGGACCATGTGACCAGGGAAGATGCTGGAT...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR CAA 72 bp TCACCCCCTGGACCTCCAGTGGTATGCATGCTATGCTaGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SPPGPPVVCMLC*GTLVCLPVCGT
Trigger: TGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGGAGGTCCAGGGGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp CCAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGTGGAGATGTGGTGCATaGCGTCTGGCTTCACCCCGT +
Preference number: 4 (lower is better)
Translates to: PVVCMLCLGTLVCLPVCGWRCGA*RLASPR
Trigger: ACGGGGTGAAGCCAGACGTCATGCACCACATCTCCA...CCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTATACTCCACTATaGCCGAGTGGCTCCGGGACA +
Preference number: 4 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGVYTPL*PSGSGT
Trigger: TGTCCCGGAGCCACTCGGTCATAGTGGAGTATACAC...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCGTGTATACTCCACTATaGCCGAGTGGCTCCGGGACA +
Preference number: 4 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLVYTPL*PSGSGT
Trigger: TGTCCCGGAGCCACTCGGTCATAGTGGAGTATACAC...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000618547.4
CDS-3UTR TCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATGCCCCGCTGCTGGGCTaGGCGGCTGTCCCGCAATGT +
Preference number: 4 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHAPLLG*AAVPQC
Trigger: ACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGC...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCAACTTGTGGGGGCAGCTaGGCAGCGAGGTTTATAGAG +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPTCGGS*AARFIE
Trigger: CTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGT...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGCTTTTCCATTACCAGTaGGGCCTGCCACAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRLFHYQ*GLPQPD
Trigger: ATCAGGCTGTGGCAGGCCTCACTGGTAATGGAAAAG...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGGACACTCTTGACCAGTaGGTCCTCTCTCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRDTLDQ*VLSPPF
Trigger: AAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGTC...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCGGCGTGGAGATGTGGTaGATGACGTCTGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATAGVEMW*MTSGFT
Trigger: GGTGAAGCCAGACGTCATGCACCACATCTCCACGCC...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR GCA 90 bp CTGCACAGTATGTCTGTGTGTGCCTTGATCGCATCACCCCCTGGACCTCCAGTGAAGCCGCCTGCCGGGTaGATCACCAGGACTCCATTG +
Preference number: 4 (lower is better)
Translates to: LHSMSVCALIASPPGPPVKPPAG*ITRTPL
Trigger: CAATGGAGTCCTGGTGATGCACCCGGCAGGCGGCTT...CACTGGAGGTCCAGGGGGTGATGCGATCAAGGCACACACAGACATACTGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp TTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCAGCAGGATGAGAGAGCCGTCCTaGAGCACGTTGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: LWGQLSSEVYRGTQGGSRMREPS*STLDSF
Trigger: AAACGAGTCCAACGTGCTGCAGGACGGCTCTCTCAT...CCTGCTGCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATGGGCCGCGCTGCATTTaGCTCCTGCCGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHGPRCI*LLPLGL
Trigger: GAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCC...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGGAACCAGGTCTGATTaGCTCTGTGTCCCCAGATAC +
Preference number: 4 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLGTRSD*LCVPRY
Trigger: GTATCTGGGGACACAGAGGCAATCAGACCTGGTTCC...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCATGGTCCCAACCTTTTaGTCCACCCCCTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PWGWAFLHRPRTELVLKAMVPTF*STPFSV
Trigger: AACAGAGAAGGGGGTGGAGCAAAAGGTTGGGACCAT...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGATGGTCCCAACCTTTTaGTCCACCCCCTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELMVPTF*STPFSV
Trigger: AACAGAGAAGGGGGTGGAGCAAAAGGTTGGGACCAT...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTATGGTCCCAACCTTTTaGTCCACCCCCTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PPLTWGLEALHACGACGTMVPTF*STPFSV
Trigger: AACAGAGAAGGGGGTGGAGCAAAAGGTTGGGACCAT...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTGCACAGTATGTCTGTGTGTGCCTTGATCGCATCACCCCCTGGACCTCCAGTGGCAGCTGTGTGCCCTTaGGCCAGTCACTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LHSMSVCALIASPPGPPVAAVCP*ASHFPS
Trigger: AGAGGGGAAGTGACTGGCCCAAGGGCACACAGCTGC...CACTGGAGGTCCAGGGGGTGATGCGATCAAGGCACACACAGACATACTGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CAGAGAAGAGCAGTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACGTGGTGCATGACGTCTaGCTTCACCCCGTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: QRRAVHGQFEEHGHVTLDVVHDV*LHPVGV
Trigger: CACGCCAACGGGGTGAAGCCAGACGTCATGCACCAC...GTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCTTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCAGCGGCGTGGAGATGTaGTGCATGACGTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGSGVEM*CMTSGF
Trigger: GAAGCCAGACGTCATGCACCACATCTCCACGCCGCT...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCGTGGAGCGGCCAATCTaGAACATGTCTGTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGVERPI*NMSVSL
Trigger: TAGCGACACAGACATGTTCCAGATTGGCCGCTCCAC...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGTGGAGCGGCCAATCTaGAACATGTCTGTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQVERPI*NMSVSL
Trigger: TAGCGACACAGACATGTTCCAGATTGGCCGCTCCAC...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGCAATCATGTTCTCTGTaGAGCGGCCAATCTGGAACA +
Preference number: 4 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLQSCSL*SGQSGT
Trigger: TGTTCCAGATTGGCCGCTCCACAGAGAACATGATTG...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAAATCCATCAGGCCATCTaGGGTCCGCCATTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKIHQAI*GPPFGR
Trigger: GCGGCCAAATGGCGGACCCCAGATGGCCTGATGGAT...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCACCAGGACTCCATTGGTaGTCAGTCCATCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPPGLHW*SVHPSG
Trigger: GCCTGATGGATGGACTGACCACCAATGGAGTCCTGG...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCAGCTTGCCCCGCTGCTaGGCTGAGCGGCTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILSLPRC*AERLSR
Trigger: GCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCT...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCTTTGCCTCCTGCCGCTaGGCCTCCAGTTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATAFASCR*ASSCFS
Trigger: ACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAA...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTAAAGCATGGGTGCCGTaGGGCAGTGGTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLKAWVP*GSGVWA
Trigger: GGCCCAGACACCACTGCCCCACGGCACCCATGCTTT...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACACCCCATCAGCATGACTaGGGTGGAGATCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SPSNMSIWCGCASRECPTPHQHD*GGDLGD
Trigger: GTCCCCAAGATCTCCACCCCAGTCATGCTGATGGGG...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGATAGCCAGCCTAAGCTaGGGGTCAAAGGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVIASLS*GSKAPG
Trigger: GCCAGGGGCCTTTGACCCCCAGCTTAGGCTGGCTAT...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTCACTCACTTGGGGGCTaGAGGCATTGCACGCATGCG +
Preference number: 4 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCHSLGG*RHCTHA
Trigger: CGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTCACCCACCACTCACTTaGGGGCTGGAGGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCHPPLT*GLEALH
Trigger: GTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTG...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCATCCAGCATCTTCCCTaGTCACATGGTCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: AMGLGFPPSTQDRAGAEGIQHLP*SHGPNL
Trigger: AAGGTTGGGACCATGTGACCAGGGAAGATGCTGGAT...GCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAATCCAGCATCTTCCCTaGTCACATGGTCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAIQHLP*SHGPNL
Trigger: AAGGTTGGGACCATGTGACCAGGGAAGATGCTGGAT...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGAGAAGAGCAGTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACCTGGAGATCATCTCCTaGCTTGGGCAGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: QRRAVHGQFEEHGHVTLDLEIIS*LGQGDG
Trigger: CCCATCCCCCTGCCCAAGCCAGGAGATGATCTCCAG...GTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCTTCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp TGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAAGTGGCTCATCCTGTTGGGGCTCCCTaGGGCAGAAGGACTGGAGAT +
Preference number: 4 (lower is better)
Translates to: CYAWGPWSVCLSVGQVAHPVGAP*GRRTGD
Trigger: ATCTCCAGTCCTTCTGCCCCAGGGAGCCCCAACAGG...ATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp AGAGCAGTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCTATGCTTGGGGACCCTaGTCTGTCTGCCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RAVHGQFEEHGHVTLDSPYAWGP*SVCLSV
Trigger: CACAGACAGGCAGACAGACCAGGGTCCCCAAGCATA...GGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGTGGAGATGTGGTGCATaGCGTCTGGCTTCACCCCGT +
Preference number: 4 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQWRCGA*RLASPR
Trigger: ACGGGGTGAAGCCAGACGTCATGCACCACATCTCCA...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR TCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGAAGGCCCCATCAGCATaGCTGGGGTGGAGATCTTGG +
Preference number: 4 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQKAPSA*LGWRSW
Trigger: CCAAGATCTCCACCCCAGTCATGCTGATGGGGCCTT...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAAGGAAGGATGAAGGATaGGTGTCTGAAACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAARKDEG*VSETGL
Trigger: CAACCCAGTTTCAGACACTCATCCTTCATCCTTCCT...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGAGGAAGGATGAAGGATaGGTGTCTGAAACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELRKDEG*VSETGL
Trigger: CAACCCAGTTTCAGACACTCATCCTTCATCCTTCCT...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCAGGAAGGATGAAGGATaGGTGTCTGAAACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: PWGWAFLHRPRTELVLKARKDEG*VSETGL
Trigger: CAACCCAGTTTCAGACACTCATCCTTCATCCTTCCT...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTAGGAAGGATGAAGGATaGGTGTCTGAAACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: PPLTWGLEALHACGACGTRKDEG*VSETGL
Trigger: CAACCCAGTTTCAGACACTCATCCTTCATCCTTCCT...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTGAGGCTGAGCTCCTATaGCACCTCCTCCGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLEAELL*HLLREA
Trigger: GGCTTCACGGAGGAGGTGTCATAGGAGCTCAGCCTC...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGCTGACCGTCCACAAATaGGGTTCAGAATCCTCCATC +
Preference number: 4 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQLTVHK*GSESSI
Trigger: GATGGAGGATTCTGAACCTCATTTGTGGACGGTCAG...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCGACACTCTTGACCAGTaGGTCCTCTCTCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLDTLDQ*VLSPPF
Trigger: AAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGTC...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR TCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGCACAGCCGACACTCTTaGCCAGTGAGTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVHSRHS*PVSPLS
Trigger: GGAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTG...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGCACAGCCGACACTCTTaGCCAGTGAGTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQHSRHS*PVSPLS
Trigger: GGAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTG...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CAGAGAAGAGCAGTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGTGCATGGCCAGTTTaGGGAGCACGGCCATGTGAC +
Preference number: 4 (lower is better)
Translates to: QRRAVHGQFEEHGHVTLDSAWPV*GARPCD
Trigger: GTCACATGGCCGTGCTCCTCAAACTGGCCATGCACT...GTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCTTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp GTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCTGCCTCAGCCAGGCTTTTCTCTaGGGTTTTGCATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VHGQFEEHGHVTLDSPCLSQAFL*GFASPW
Trigger: CCAAGGAGATGCAAAACCTCAGAGAAAAGCCTGGCT...GAGGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CAGCTCTCTGATCTGTACCACAAGGAGCTGCCACTAACACCTGTGTCAGAACTATTCACCCCGTTGGCGTaGGACCGGCGGCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: QLSDLYHKELPLTPVSELFTPLA*DRRLSA
Trigger: GGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAA...TAGTTCTGACACAGGTGTTAGTGGCAGCTCCTTGTGGTACAGATCAGAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CAGAGAAGAGCAGTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACGGCGTGGAGATGTGGTaGATGACGTCTGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: QRRAVHGQFEEHGHVTLDGVEMW*MTSGFT
Trigger: GGTGAAGCCAGACGTCATGCACCACATCTCCACGCC...GTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCTTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGCGCATGAAGCCGTGTTaGCATTTGTTAACAGTCTGT +
Preference number: 4 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRRMKPC*HLLTVC
Trigger: ACAGACTGTTAACAAATGGCAACACGGCTTCATGCG...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GGAAGGGCAAGGCCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGATTACCAGTGAGGCCTaGCACAGCCTGATTTGTACT +
Preference number: 4 (lower is better)
Translates to: GRARPWGWAFLHRPRTELITSEA*HSLICT
Trigger: AGTACAAATCAGGCTGTGGCAGGCCTCACTGGTAAT...CAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGGCCTTGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCTCATCATCAGCACAGTaGGGGGCACATGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATASSSAQ*GAHGGH
Trigger: ATGCCCACCATGTGCCCCGCACTGTGCTGATGATGA...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR CCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCTTCCAGCACCATTCTaGCCACGCTCCGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILLPAPF*PRSGPR
Trigger: GCGGGGCCCGGAGCGTGGCCAGAATGGTGCTGGAAG...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCTGGCTTCACCCCGTTaGCGTGCGACCGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHLASPR*RATGGS
Trigger: TGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAG...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGAGCGGCGTGGAGATGTaGTGCATGACGTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQSGVEM*CMTSGF
Trigger: GAAGCCAGACGTCATGCACCACATCTCCACGCCGCT...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CCA 90 bp CTGCACAGTATGTCTGTGTGTGCCTTGATCGCATCACCCCCTGGACCTCCAGTGAGCGGCGTGGAGATGTaGTGCATGACGTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LHSMSVCALIASPPGPPVSGVEM*CMTSGF
Trigger: GAAGCCAGACGTCATGCACCACATCTCCACGCCGCT...CACTGGAGGTCCAGGGGGTGATGCGATCAAGGCACACACAGACATACTGTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGAGGTTACTCAGTGCCTTaGAGACGAGCGGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: QWYACYAWGPWSVCLSVGGYSVP*RRAAWR
Trigger: TCTCCACGCCGCTCGTCTCCAAGGCACTGAGTAACC...TCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCATCCACTATGACCGAGTaGCTCCGGGACAGTGTATAC +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPSTMTE*LRDSVY
Trigger: GTATACACTGTCCCGGAGCCACTCGGTCATAGTGGA...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAATTTGCCTCCTGCCGCTaGGCCTCCAGTTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKFASCR*ASSCFS
Trigger: ACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAA...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATTCTCAGAGCAGACGTaGCCGCAAGGTGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPSNMSIWCGCASRECPTFSEQT*PQGAKA
Trigger: TGCCTTTGCACCTTGCGGCCACGTCTGCTCTGAGAA...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGCATGTCCATCTGGTGTaGCTGTGCCAGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQHVHLV*LCQQGV
Trigger: CACTCCCTGCTGGCACAGCCACACCAGATGGACATG...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCTCCAACATGTCCATCTaGTGTGGCTGTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATASNMSI*CGCASR
Trigger: CCTGCTGGCACAGCCACACCAGATGGACATGTTGGA...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CGAGTGGCTCCGGGACAGTGTATACGAGATGCTGTGCTGACCACGGTTACTCAGCCCCATCAGCATGACTaGGGTGGAGATCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RVAPGQCIRDAVLTTVTQPHQHD*GGDLGD
Trigger: GTCCCCAAGATCTCCACCCCAGTCATGCTGATGGGG...CTGAGTAACCGTGGTCAGCACAGCATCTCGTATACACTGTCCCGGAGCCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTCACTCACTTGGGGGCTaGAGGCATTGCACGCATGCG +
Preference number: 4 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLHSLGG*RHCTHA
Trigger: CGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTCTTCCCTGGTCACATaGTCCCAACCTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLSSLVT*SQPFAP
Trigger: TGGAGCAAAAGGTTGGGACCATGTGACCAGGGAAGA...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGATCCAGCATCTTCCCTaGTCACATGGTCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGIQHLP*SHGPNL
Trigger: AAGGTTGGGACCATGTGACCAGGGAAGATGCTGGAT...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
3UTR CAA 72 bp GTCAGTCCATCCATCAGGCCATCTGGGGTCCGCCATTaGGCCGCTCGCTCTCCAAGGAAGATGTTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: VSPSIRPSGVRH*AARSPRKMLLE
Trigger: CTCTAGCAACATCTTCCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAGATGGCCTGATGGATGGACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR TCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAGCGGGCCCTGGAAAATaGGGCGGACGCAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: PLLTPDRPQMRFRILHPAAGPGK*GGRSHA
Trigger: AGCATGGCTGCGTCCGCCTCATTTTCCAGGGCCCGC...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGAGGAAGGATGAAGGATaGGTGTCTGAAACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVRKDEG*VSETGL
Trigger: CAACCCAGTTTCAGACACTCATCCTTCATCCTTCCT...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp GGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGCTGACCGTCCACAAATaGGGTTCAGAATCCTCCATC +
Preference number: 4 (lower is better)
Translates to: GFPPSTQDRAGAEGPISMLTVHK*GSESSI
Trigger: GATGGAGGATTCTGAACCTCATTTGTGGACGGTCAG...CATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACCTCCCCACAGAGTTaGCGCTCTGGAAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: PVVCMLCLGTLVCLPVCGTSPQS*RSGKKS
Trigger: GCTTTTCTTTCCAGAGCGTCAACTCTGTGGGGAGGT...CCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCGCCCTTGTCCCCACTTaGCAGACAACCATTGTAGCA +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATAALVPT*QTTIVA
Trigger: TGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGC...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320740.12
CDS-3UTR GCA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGACAGTGTATACGAGATaGTGTGCTGACCACGGTTAC +
Preference number: 4 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQTVYTR*CADHGY
Trigger: GTAACCGTGGTCAGCACAGCATCTCGTATACACTGT...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCATGAGAGAGCCGTCCTaGAGCACGTTGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGMREPS*STLDSF
Trigger: AAACGAGTCCAACGTGCTGCAGGACGGCTCTCTCAT...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCATGAGAGAGCCGTCCTaGAGCACGTTGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATAMREPS*STLDSF
Trigger: AAACGAGTCCAACGTGCTGCAGGACGGCTCTCTCAT...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGGGGCCGCGCTGCATTTaGCTCCTGCCGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWGPRCI*LLPLGL
Trigger: GAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCC...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR GCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCGGCACGATGTGGGATaGCCCAGGAAGGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILRHDVG*PRKGKA
Trigger: GGCCTTGCCCTTCCTGGGGCATCCCACATCGTGCCG...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATGGGGGCTGGAGGCATTaGACGCATGCGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHGGWRH*THAGHV
Trigger: CACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCC...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAGGGGGCTGGAGGCATTaGACGCATGCGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: PLLTPDRPQMRFRILHPAGGWRH*THAGHV
Trigger: CACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCC...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATGTGCTAGGCCCAGCCTaGCACCCACCCACCACTCAC +
Preference number: 4 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHVLGPA*HPPTTH
Trigger: GTGAGTGGTGGGTGGGTGGCAGGCTGGGCCTAGCAC...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGAACCAGGTCTGATTaGCTCTGTGTCCCCAGATAC +
Preference number: 4 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGGTRSD*LCVPRY
Trigger: GTATCTGGGGACACAGAGGCAATCAGACCTGGTTCC...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGTCATCATCAGCACAGTaGGGGGCACATGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQSSSAQ*GAHGGH
Trigger: ATGCCCACCATGTGCCCCGCACTGTGCTGATGATGA...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR GCA 90 bp CCAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGGTGGTATGCATGCTATaGTTGGGGACCCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PVVCMLCLGTLVCLPVCGVVCML*LGTLVC
Trigger: ACAGACCAGGGTCCCCAAGCATAGCATGCATACCAC...CCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CTGCACAGTATGTCTGTGTGTGCCTTGATCGCATCACCCCCTGGACCTCCAGTGGGACCTCCAGTGGTATaGATGCTATGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: LHSMSVCALIASPPGPPVGPPVV*MLCLGT
Trigger: GGTCCCCAAGCATAGCATGCATACCACTGGAGGTCC...CACTGGAGGTCCAGGGGGTGATGCGATCAAGGCACACACAGACATACTGTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCGATGGGCTCCTCGCCTaGCTGCGCATCTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILDGLLA*LRIFTG
Trigger: CCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATC...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTAGCGGCGTGGAGATGTaGTGCATGACGTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLSGVEM*CMTSGF
Trigger: GAAGCCAGACGTCATGCACCACATCTCCACGCCGCT...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCTCCACTATGACCGAGTaGCTCCGGGACAGTGTATAC +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATASTMTE*LRDSVY
Trigger: GTATACACTGTCCCGGAGCCACTCGGTCATAGTGGA...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCCAATCATGTTCTCTGTaGAGCGGCCAATCTGGAACA +
Preference number: 4 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGQSCSL*SGQSGT
Trigger: TGTTCCAGATTGGCCGCTCCACAGAGAACATGATTG...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGCCAGGACTCCATTGGTaGTCAGTCCATCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQPGLHW*SVHPSG
Trigger: GCCTGATGGATGGACTGACCACCAATGGAGTCCTGG...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGTTGCTTCAGTGTaGGAGCCCGCAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHPVASV*EPAAAP
Trigger: CGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGG...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAATTCTCAGAGCAGACGTaGCCGCAAGGTGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKFSEQT*PQGAKA
Trigger: TGCCTTTGCACCTTGCGGCCACGTCTGCTCTGAGAA...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGATTCTCAGAGCAGACGTaGCCGCAAGGTGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: EPVHRPSLLYRARFPSCGFSEQT*PQGAKA
Trigger: TGCCTTTGCACCTTGCGGCCACGTCTGCTCTGAGAA...TCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGTGTCTGAAACTGGGTTaGCAGGCTCAGGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVCLKLG*QAQGIA
Trigger: GGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACA...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCATCTTCCCTGGTCACATaGTCCCAACCTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPSSLVT*SQPFAP
Trigger: TGGAGCAAAAGGTTGGGACCATGTGACCAGGGAAGA...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTCTTCCCTGGTCACATaGTCCCAACCTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EGHSPSNMSIWCGCASRESSLVT*SQPFAP
Trigger: TGGAGCAAAAGGTTGGGACCATGTGACCAGGGAAGA...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAAGTGGCTCATGATCGCATCACCCCCTaGACCTCCAGTGGTATGCAT +
Preference number: 4 (lower is better)
Translates to: CYAWGPWSVCLSVGQVAHDRITP*TSSGMH
Trigger: ATGCATACCACTGGAGGTCCAGGGGGTGATGCGATC...ATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTCTTTTCCATTACCAGTaGGGCCTGCCACAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCLFHYQ*GLPQPD
Trigger: ATCAGGCTGTGGCAGGCCTCACTGGTAATGGAAAAG...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACACTGACCGTCCACAAATaGGGTTCAGAATCCTCCATC +
Preference number: 4 (lower is better)
Translates to: SPSNMSIWCGCASRECPTLTVHK*GSESSI
Trigger: GATGGAGGATTCTGAACCTCATTTGTGGACGGTCAG...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCCCTTGTTCCCCCGGTaGTGGAGGTCTGAGGTTCGG +
Preference number: 4 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILPLFPR*WRSEVR
Trigger: CCGAACCTCAGACCTCCAGCACCGGGGGAACAAGGG...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGAGCCCTTGTCCCCACTTaGCAGACAACCATTGTAGCA +
Preference number: 4 (lower is better)
Translates to: QWYACYAWGPWSVCLSVGALVPT*QTTIVA
Trigger: TGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGC...TCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAGGCGGTCACAGAGGATaGGGCAGGCATAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PLLTPDRPQMRFRILHPAGGHRG*GRHSGR
Trigger: TCTCCCGCTATGCCTGCCGCATCCTCTGTGACCGCC...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAGACGTGGCCGCAAGGTaGAAAGGCATGGCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: PLLTPDRPQMRFRILHPADVAAR*KGMARR
Trigger: CCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTC...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAAGGAACCAGGTCTGATTaGCTCTGTGTCCCCAGATAC +
Preference number: 4 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKGTRSD*LCVPRY
Trigger: GTATCTGGGGACACAGAGGCAATCAGACCTGGTTCC...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCCGCATGAAGCCGTGTTaGCATTTGTTAACAGTCTGT +
Preference number: 4 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLRMKPC*HLLTVC
Trigger: ACAGACTGTTAACAAATGGCAACACGGCTTCATGCG...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTGCACAGTATGTCTGTGTGTGCCTTGATCGCATCACCCCCTGGACCTCCAGTGGAAGCCACCTGGGACTaGACAGTATGTCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LHSMSVCALIASPPGPPVEATWD*TVCLCV
Trigger: CACACACAGACATACTGTGCAGTCCCAGGTGGCTTC...CACTGGAGGTCCAGGGGGTGATGCGATCAAGGCACACACAGACATACTGTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CCTTTAGGCTATAAACTGCTCACACATGGGCCAAGTGTCACTCTCATAAGAAGGCTGGCTTCACCCCGTTaGCGTGCGACCGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: PLGYKLLTHGPSVTLIRRLASPR*RATGGS
Trigger: TGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAG...CCTTCTTATGAGAGTGACACTTGGCCCATGTGTGAGCAGTTTATAGCCTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAAAGGGGCAGGCGGCATaGAAAGCATGGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PLLTPDRPQMRFRILHPAKGQAA*KAWVPW
Trigger: CCACGGCACCCATGCTTTCCATGCCGCCTGCCCCTT...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGAGAAGAGCAGTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACTGTCTGTGGGACAAGTaGCTCATGCTAAGAACCCCC +
Preference number: 4 (lower is better)
Translates to: QRRAVHGQFEEHGHVTLDCLWDK*LMLRTP
Trigger: GGGGGTTCTTAGCATGAGCCACTTGTCCCACAGACA...GTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCTTCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCGAGGCTGAGCTCCTATaGCACCTCCTCCGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILEAELL*HLLREA
Trigger: GGCTTCACGGAGGAGGTGTCATAGGAGCTCAGCCTC...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp TTTAACAAACAATGCTTCCCCAGACCTCCCCACAGAGTTGACGCTCTGGAAAGAAGCTGCCAGCAGCCTTaGAGCCACCTGGGACTGCAC +
Preference number: 4 (lower is better)
Translates to: FNKQCFPRPPHRVDALERSCQQP*SHLGLH
Trigger: GTGCAGTCCCAGGTGGCTTCAAGGCTGCTGGCAGCT...TCTTTCCAGAGCGTCAACTCTGTGGGGAGGTCTGGGGAAGCATTGTTTGTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp TGTCAGAACTACTGTAAGGACCCTTTCCTCCTGCGAGAGGAGAACAGTGCTAAACCCTTGTTCCCCCGGTaGTGGAGGTCTGAGGTTCGG +
Preference number: 4 (lower is better)
Translates to: CQNYCKDPFLLREENSAKPLFPR*WRSEVR
Trigger: CCGAACCTCAGACCTCCAGCACCGGGGGAACAAGGG...TTTAGCACTGTTCTCCTCTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CCTTTAGGCTATAAACTGCTCACACATGGGCCAAGTGTCACTCTCATAAGAAGGGGCTCCTCGCCTGGCTaGGCATCTTCACCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PLGYKLLTHGPSVTLIRRGSSPG*ASSPGE
Trigger: CTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCC...CCTTCTTATGAGAGTGACACTTGGCCCATGTGTGAGCAGTTTATAGCCTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACAACAGTGTATACGAGATaGTGTGCTGACCACGGTTAC +
Preference number: 4 (lower is better)
Translates to: SPSNMSIWCGCASRECPTTVYTR*CADHGY
Trigger: GTAACCGTGGTCAGCACAGCATCTCGTATACACTGT...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAAGGGAGTGTCCCACATaGAGAGCTCCCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLLTPDRPQMRFRILHPARECPT*RAPSGL
Trigger: CAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCT...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGGGGGGCTGGAGGCATTaGACGCATGCGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWGGWRH*THAGHV
Trigger: CACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCC...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR GCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGGTGCTAGGCCCAGCCTaGCACCCACCCACCACTCAC +
Preference number: 4 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWVLGPA*HPPTTH
Trigger: GTGAGTGGTGGGTGGGTGGCAGGCTGGGCCTAGCAC...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR GCA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCATTACCAGTGAGGCCTaGCACAGCCTGATTTGTACT +
Preference number: 4 (lower is better)
Translates to: LLREASLTFPLPVRPATAITSEA*HSLICT
Trigger: AGTACAAATCAGGCTGTGGCAGGCCTCACTGGTAAT...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAAGTGGCTCATTCTCCTTGGCCAATGTaGTCATGCCAGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: CYAWGPWSVCLSVGQVAHSPWPM*SCQRRA
Trigger: TGCTCTTCTCTGGCATGAGCACATTGGCCAAGGAGA...ATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCAGGCATAGCGGGAGATaGTGCTCTGGGCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILRHSGR*CSGQKG
Trigger: GCCCTTCTGCCCAGAGCACCATCTCCCGCTATGCCT...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CTTTCCTCCTGCGAGAGGAGAACAGTGCTAAACCTGTCTGAACGTGATAGACATGCGGGCAGTATAGGGTaGCCGGCGGTCACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LSSCERRTVLNLSERDRHAGSIG*PAVTED
Trigger: ATCCTCTGTGACCGCCGGCCACCCTATACTGCCCGC...ATGTCTATCACGTTCAGACAGGTTTAGCACTGTTCTCCTCTCGCAGGAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CTTTCCTCCTGCGAGAGGAGAACAGTGCTAAACCTGTCTGAACGTGATAGACATCTGGGGTCCGCCATTTaGCCGCTCGCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LSSCERRTVLNLSERDRHLGSAI*PLALQG
Trigger: TCCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAG...ATGTCTATCACGTTCAGACAGGTTTAGCACTGTTCTCCTCTCGCAGGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCACCCACCACTCACTTaGGGGCTGGAGGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILHPPLT*GLEALH
Trigger: GTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTG...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GCATCTCCTTGGCCAATGTGCTCATGCCAGAGAAGAGCAGTGCATGGCCAGTTTCTGGGGCAGAAGGACTaGAGATCATCTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ASPWPMCSCQRRAVHGQFLGQKD*RSSPGL
Trigger: CAAGCCAGGAGATGATCTCCAGTCCTTCTGCCCCAG...AAACTGGCCATGCACTGCTCTTCTCTGGCATGAGCACATTGGCCAAGGAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR CAA 72 bp TCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTaGACCAGTGAGTCCTCTCTCCTCCCTTTGTTGACT +
Preference number: 4 (lower is better)
Translates to: SGMMALVSQPTL*TSESSLLPLLT
Trigger: AGTCAACAAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGACAGTGTATACGAGATaGTGTGCTGACCACGGTTAC +
Preference number: 4 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVTVYTR*CADHGY
Trigger: GTAACCGTGGTCAGCACAGCATCTCGTATACACTGT...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGGACGTGGCCGCAAGGTaGAAAGGCATGGCTAGGCGG +
Preference number: 4 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWDVAAR*KGMARR
Trigger: CCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGTC...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR GCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATGAGGCATTGCACGCATaGGGGGCATGTGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHEALHA*GACGTC
Trigger: ACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTC...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp GAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGAATTACCAGTGAGGCCTaGCACAGCCTGATTTGTACT +
Preference number: 4 (lower is better)
Translates to: EPVHRPSLLYRARFPSCGITSEA*HSLICT
Trigger: AGTACAAATCAGGCTGTGGCAGGCCTCACTGGTAAT...TCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGCGCCTCTTGCGGCGATaGTCAGCCTTCGTAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWRLLRR*SAFVGG
Trigger: TCCGCCTACGAAGGCTGAGCATCGCCGCAAGAGGCG...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349459.10
CDS-3UTR CCA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTCAATCATGTTCTCTGTaGAGCGGCCAATCTGGAACA +
Preference number: 4 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCQSCSL*SGQSGT
Trigger: TGTTCCAGATTGGCCGCTCCACAGAGAACATGATTG...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp TGTCAGAACTACTGTAAGGACCCTTTCCTCCTGCGAGAGGAGAACAGTGCTAAAATCCATCAGGCCATCTaGGGTCCGCCATTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: CQNYCKDPFLLREENSAKIHQAI*GPPFGR
Trigger: GCGGCCAAATGGCGGACCCCAGATGGCCTGATGGAT...TTTAGCACTGTTCTCCTCTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGAAAGCATGGGTGCCGTaGGGCAGTGGTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWKAWVP*GSGVWA
Trigger: GGCCCAGACACCACTGCCCCACGGCACCCATGCTTT...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR CCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCACATGTCCATCTGGTGTaGCTGTGCCAGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PLLTPDRPQMRFRILHPAHVHLV*LCQQGV
Trigger: CACTCCCTGCTGGCACAGCCACACCAGATGGACATG...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CCTTTAGGCTATAAACTGCTCACACATGGGCCAAGTGTCACTCTCATAAGAAGGGATAGGGGTGGGGAATaGAGCGGGCCACCTACCAGC +
Preference number: 4 (lower is better)
Translates to: PLGYKLLTHGPSVTLIRRDRGGE*SGPPTS
Trigger: GCTGGTAGGTGGCCCGCTCCATTCCCCACCCCTATC...CCTTCTTATGAGAGTGACACTTGGCCCATGTGTGAGCAGTTTATAGCCTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CTTTCCTCCTGCGAGAGGAGAACAGTGCTAAACCTGTCTGAACGTGATAGACATGATCATCTCCTGGCTTaGGCAGGGGGATGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSSCERRTVLNLSERDRHDHLLA*AGGWAA
Trigger: AGCTGCCCATCCCCCTGCCCAAGCCAGGAGATGATC...ATGTCTATCACGTTCAGACAGGTTTAGCACTGTTCTCCTCTCGCAGGAGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp GCATCTCCTTGGCCAATGTGCTCATGCCAGAGAAGAGCAGTGCATGGCCAGTTTATGCTAAGAACCCCCTaGGCCTGGGATTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: ASPWPMCSCQRRAVHGQFMLRTP*AWDSLI
Trigger: TATCAGGGAATCCCAGGCCCAGGGGGTTCTTAGCAT...AAACTGGCCATGCACTGCTCTTCTCTGGCATGAGCACATTGGCCAAGGAGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR CAA 72 bp CCGACACTCTTGACCAGTGAGTCCTCTCTCCTCCCTTaGTTGACTCCTGACCGTCCACAAATGAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PTLLTSESSLLP*LTPDRPQMRFR
Trigger: TCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCTTTAGGCTATAAACTGCTCACACATGGGCCAAGTGTCACTCTCATAAGAAGGAGCCAGCGGCATAGATaGGGGCAGTATAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PLGYKLLTHGPSVTLIRRSQRHR*GQYRVA
Trigger: GGCCACCCTATACTGCCCGCATCTATGCCGCTGGCT...CCTTCTTATGAGAGTGACACTTGGCCCATGTGTGAGCAGTTTATAGCCTAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp GAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACGCATGAAGCCGTGTTaGCATTTGTTAACAGTCTGT +
Preference number: 4 (lower is better)
Translates to: EPVHRPSLLYRARFPSCGRMKPC*HLLTVC
Trigger: ACAGACTGTTAACAAATGGCAACACGGCTTCATGCG...TCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTTTCCTCCTGCGAGAGGAGAACAGTGCTAAACCTGTCTGAACGTGATAGACATGGACCCTGGTCTGTCTaGCTGTCTGTGGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: LSSCERRTVLNLSERDRHGPWSV*LSVGQV
Trigger: CACTTGTCCCACAGACAGGCAGACAGACCAGGGTCC...ATGTCTATCACGTTCAGACAGGTTTAGCACTGTTCTCCTCTCGCAGGAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CCAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGTTTTCTCTGAGGTTTTaGATCTCCTTGGCCAATGTG +
Preference number: 4 (lower is better)
Translates to: PVVCMLCLGTLVCLPVCGFSLRF*ISLANV
Trigger: CACATTGGCCAAGGAGATGCAAAACCTCAGAGAAAA...CCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCACCAGGACTCCATTGGTaGTCAGTCCATCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: PLLTPDRPQMRFRILHPAPGLHW*SVHPSG
Trigger: GCCTGATGGATGGACTGACCACCAATGGAGTCCTGG...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGCTCTCTGATCTGTACCACAAGGAGCTGCCACTAACACCTGTGTCAGAACTACCAGGACTCCATTGGTaGTCAGTCCATCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: QLSDLYHKELPLTPVSELPGLHW*SVHPSG
Trigger: GCCTGATGGATGGACTGACCACCAATGGAGTCCTGG...TAGTTCTGACACAGGTGTTAGTGGCAGCTCCTTGTGGTACAGATCAGAGAGCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGCACCCACCACTCACTTaGGGGCTGGAGGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWHPPLT*GLEALH
Trigger: GTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTG...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGCTCTCTGATCTGTACCACAAGGAGCTGCCACTAACACCTGTGTCAGAACTATGGGATTCCCTGATATaGAGCCTGTTGGGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QLSDLYHKELPLTPVSELWDSLI*SLLGLP
Trigger: AGGGAGCCCCAACAGGCTCCATATCAGGGAATCCCA...TAGTTCTGACACAGGTGTTAGTGGCAGCTCCTTGTGGTACAGATCAGAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCTCTCCTCCCTTTGTTaGCTCCTGACCGTCCACAAA +
Preference number: 4 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILLSSLC*LLTVHK
Trigger: TTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAG...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATATGAGAGAGCCGTCCTaGAGCACGTTGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHMREPS*STLDSF
Trigger: AAACGAGTCCAACGTGCTGCAGGACGGCTCTCTCAT...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAGGAACCAGGTCTGATTaGCTCTGTGTCCCCAGATAC +
Preference number: 4 (lower is better)
Translates to: PLLTPDRPQMRFRILHPAGTRSD*LCVPRY
Trigger: GTATCTGGGGACACAGAGGCAATCAGACCTGGTTCC...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CTTTCCTCCTGCGAGAGGAGAACAGTGCTAAACCTGTCTGAACGTGATAGACATCTCCAGTGGTATGCATaGTATGCTTGGGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: LSSCERRTVLNLSERDRHLQWYA*YAWGPW
Trigger: CCAGGGTCCCCAAGCATAGCATGCATACCACTGGAG...ATGTCTATCACGTTCAGACAGGTTTAGCACTGTTCTCCTCTCGCAGGAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CAGCTCTCTGATCTGTACCACAAGGAGCTGCCACTAACACCTGTGTCAGAACTACTGTCTGCCTGTCTGTaGGACAAGTGGCTCATGCTA +
Preference number: 4 (lower is better)
Translates to: QLSDLYHKELPLTPVSELLSACL*DKWLML
Trigger: TAGCATGAGCCACTTGTCCCACAGACAGGCAGACAG...TAGTTCTGACACAGGTGTTAGTGGCAGCTCCTTGTGGTACAGATCAGAGAGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp TGTCAGAACTACTGTAAGGACCCTTTCCTCCTGCGAGAGGAGAACAGTGCTAAACCCCTGGACCTCCAGTaGTATGCATGCTATGCTTGG +
Preference number: 4 (lower is better)
Translates to: CQNYCKDPFLLREENSAKPLDLQ*YACYAW
Trigger: CCAAGCATAGCATGCATACCACTGGAGGTCCAGGGG...TTTAGCACTGTTCTCCTCTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp CCTTTAGGCTATAAACTGCTCACACATGGGCCAAGTGTCACTCTCATAAGAAGGGTGTATACTCCACTATaGCCGAGTGGCTCCGGGACA +
Preference number: 4 (lower is better)
Translates to: PLGYKLLTHGPSVTLIRRVYTPL*PSGSGT
Trigger: TGTCCCGGAGCCACTCGGTCATAGTGGAGTATACAC...CCTTCTTATGAGAGTGACACTTGGCCCATGTGTGAGCAGTTTATAGCCTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR TCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCACTGACCGTCCACAAATaGGGTTCAGAATCCTCCATC +
Preference number: 4 (lower is better)
Translates to: PLLTPDRPQMRFRILHPALTVHK*GSESSI
Trigger: GATGGAGGATTCTGAACCTCATTTGTGGACGGTCAG...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGTCATCATCAGCACAGTaGGGGGCACATGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWSSSAQ*GAHGGH
Trigger: ATGCCCACCATGTGCCCCGCACTGTGCTGATGATGA...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR CCA 90 bp GTGATAGACATGCTACAAACTGCCAACCCTTTAGGCTATAAACTGCTCACACATAGGCATAGCGGGAGATaGTGCTCTGGGCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VIDMLQTANPLGYKLLTHRHSGR*CSGQKG
Trigger: GCCCTTCTGCCCAGAGCACCATCTCCCGCTATGCCT...ATGTGTGAGCAGTTTATAGCCTAAAGGGTTGGCAGTTTGTAGCATGTCTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGCCAGGACTCCATTGGTaGTCAGTCCATCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWPGLHW*SVHPSG
Trigger: GCCTGATGGATGGACTGACCACCAATGGAGTCCTGG...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR CCA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCTCTTCCCTGGTCACATaGTCCCAACCTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILSSLVT*SQPFAP
Trigger: TGGAGCAAAAGGTTGGGACCATGTGACCAGGGAAGA...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp GTCAGAACTACTGTAAGGACCCTTTCCTCCTGCGAGAGGAGAACAGTGCTAAACGGTTTTGCATCTCCTTaGCCAATGTGCTCATGCCAG +
Preference number: 4 (lower is better)
Translates to: VRTTVRTLSSCERRTVLNGFASP*PMCSCQ
Trigger: CTGGCATGAGCACATTGGCCAAGGAGATGCAAAACC...GTTTAGCACTGTTCTCCTCTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
3UTR CAA 72 bp ACACTCTTGACCAGTGAGTCCTCTCTCCTCCCTTTGTaGACTCCTGACCGTCCACAAATGAGGTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: TLLTSESSLLPL*TPDRPQMRFRI
Trigger: GATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGAGGACTCACTGGTCAAGAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR GCA 90 bp CCTTTAGGCTATAAACTGCTCACACATGGGCCAAGTGTCACTCTCATAAGAAGGATTGTAGCAGCTGTGTaGCCTTGGGCCAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: PLGYKLLTHGPSVTLIRRIVAAV*PWASHF
Trigger: GAAGTGACTGGCCCAAGGGCACACAGCTGCTACAAT...CCTTCTTATGAGAGTGACACTTGGCCCATGTGTGAGCAGTTTATAGCCTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGATGAGAGAGCCGTCCTaGAGCACGTTGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWMREPS*STLDSF
Trigger: AAACGAGTCCAACGTGCTGCAGGACGGCTCTCTCAT...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR CCA 90 bp CCTTTAGGCTATAAACTGCTCACACATGGGCCAAGTGTCACTCTCATAAGAAGGTCCACTATGACCGAGTaGCTCCGGGACAGTGTATAC +
Preference number: 4 (lower is better)
Translates to: PLGYKLLTHGPSVTLIRRSTMTE*LRDSVY
Trigger: GTATACACTGTCCCGGAGCCACTCGGTCATAGTGGA...CCTTCTTATGAGAGTGACACTTGGCCCATGTGTGAGCAGTTTATAGCCTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CAGCTCTCTGATCTGTACCACAAGGAGCTGCCACTAACACCTGTGTCAGAACTACAATCATGTTCTCTGTaGAGCGGCCAATCTGGAACA +
Preference number: 4 (lower is better)
Translates to: QLSDLYHKELPLTPVSELQSCSL*SGQSGT
Trigger: TGTTCCAGATTGGCCGCTCCACAGAGAACATGATTG...TAGTTCTGACACAGGTGTTAGTGGCAGCTCCTTGTGGTACAGATCAGAGAGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCAATCATGTTCTCTGTaGAGCGGCCAATCTGGAACA +
Preference number: 4 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHQSCSL*SGQSGT
Trigger: TGTTCCAGATTGGCCGCTCCACAGAGAACATGATTG...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR TCA 90 bp CCTTTAGGCTATAAACTGCTCACACATGGGCCAAGTGTCACTCTCATAAGAAGGCTAACCTCAGCTCTCTaGTCTGTACCACAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PLGYKLLTHGPSVTLIRRLTSAL*SVPQGA
Trigger: AGCTCCTTGTGGTACAGATCAGAGAGCTGAGGTTAG...CCTTCTTATGAGAGTGACACTTGGCCCATGTGTGAGCAGTTTATAGCCTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCACGCATGAAGCCGTGTTaGCATTTGTTAACAGTCTGT +
Preference number: 4 (lower is better)
Translates to: PLLTPDRPQMRFRILHPARMKPC*HLLTVC
Trigger: ACAGACTGTTAACAAATGGCAACACGGCTTCATGCG...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CCA 90 bp CAGCTCTCTGATCTGTACCACAAGGAGCTGCCACTAACACCTGTGTCAGAACTAACAGAGTTGACGCTCTaGAAAGAAAAGCCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: QLSDLYHKELPLTPVSELTELTL*KEKPGF
Trigger: AAAGCCTGGCTTTTCTTTCCAGAGCGTCAACTCTGT...TAGTTCTGACACAGGTGTTAGTGGCAGCTCCTTGTGGTACAGATCAGAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGACAGTGTATACGAGATaGTGTGCTGACCACGGTTAC +
Preference number: 4 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWTVYTR*CADHGY
Trigger: GTAACCGTGGTCAGCACAGCATCTCGTATACACTGT...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000618547.4
CDS-3UTR CCA 90 bp GTGATAGACATGCTACAAACTGCCAACCCTTTAGGCTATAAACTGCTCACACATGTGGAGCGGCCAATCTaGAACATGTCTGTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: VIDMLQTANPLGYKLLTHVERPI*NMSVSL
Trigger: TAGCGACACAGACATGTTCCAGATTGGCCGCTCCAC...ATGTGTGAGCAGTTTATAGCCTAAAGGGTTGGCAGTTTGTAGCATGTCTATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CCA 90 bp GTGATAGACATGCTACAAACTGCCAACCCTTTAGGCTATAAACTGCTCACACATTATGCATGCTATGCTTaGGGACCCTGGTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VIDMLQTANPLGYKLLTHYACYA*GPWSVC
Trigger: GCAGACAGACCAGGGTCCCCAAGCATAGCATGCATA...ATGTGTGAGCAGTTTATAGCCTAAAGGGTTGGCAGTTTGTAGCATGTCTATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp GTGATAGACATGCTACAAACTGCCAACCCTTTAGGCTATAAACTGCTCACACATTGGCCAATGTGCTCATaGCAGAGAAGAGCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: VIDMLQTANPLGYKLLTHWPMCS*QRRAVH
Trigger: ATGCACTGCTCTTCTCTGGCATGAGCACATTGGCCA...ATGTGTGAGCAGTTTATAGCCTAAAGGGTTGGCAGTTTGTAGCATGTCTATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR GCA 90 bp GTGATAGACATGCTACAAACTGCCAACCCTTTAGGCTATAAACTGCTCACACATACAGTGTATACGAGATaGTGTGCTGACCACGGTTAC +
Preference number: 4 (lower is better)
Translates to: VIDMLQTANPLGYKLLTHTVYTR*CADHGY
Trigger: GTAACCGTGGTCAGCACAGCATCTCGTATACACTGT...ATGTGTGAGCAGTTTATAGCCTAAAGGGTTGGCAGTTTGTAGCATGTCTATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS GCA 90 bp GGCGTGGAGATGTGGTGCATGACGTCTGGCTTCACCCCGTTGGCGTaGGACCGGCGGCTCAGTGCCAGGCGGCTTCGCCGGCGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: GVEMWCMTSGFTPLA*DRRLSARRLRRRPL
Trigger: CAAGGGCCGCCGGCGAAGCCGCCTGGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
ENST00000527230.1
ENST00000532970.5
CDS GCA 90 bp CATGACGTCTGGCTTCACCCCGTTGGCGTGCGACCGGCGGCTCAGTaGCAGGCGGCTTCGCCGGCGGCCCTTGTCCCCACTTGCCAGACA +
Preference number: 5 (lower is better)
Translates to: HDVWLHPVGVRPAAQ*QAASPAALVPTCQT
Trigger: TGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAGCCGCCTGGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
ENST00000527230.1
ENST00000532970.5
CDS-3UTR CAA 90 bp ACGGGGCACTGGGGCCGCGCTGCATTTGCCTCCTGCCGCTGGGCCTCCAGTTGCCTTCGCCGGCGGCCCTaGTCCCCACTTGCCAGACAA +
Preference number: 5 (lower is better)
Translates to: TGHWGRAAFASCRWASSCLRRRP*SPLARQ
Trigger: TTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAG...GCAACTGGAGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCCAGTGCCCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CAA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCGGGGCCGCGCTGCATTaGCCTCCTGCCGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCGAALH*PPAAGP
Trigger: AGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCC...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCGGCCGAAGGGCCTTACAGCTaGCCCCGCTGCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: PQGAKAWLGGPGSRQRPAEGPYS*PRCWAE
Trigger: CTCAGCCCAGCAGCGGGGCAAGCTGTAAGGCCCTTC...GGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528752.1
CDS-3UTR CAA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGGGCCGCGCTGCATTaGCCTCCTGCCGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAAGAALH*PPAAGP
Trigger: AGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCC...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS CCA 90 bp CAGTGCCTTGGAGACGAGCGGCGTGGAGATGTGGTGCATGACGTCTaGCTTCACCCCGTTGGCGTGCGACCGGCGGCTCAGTGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: QCLGDERRGDVVHDV*LHPVGVRPAAQCQA
Trigger: CGCCTGGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCGTCTCCAAGGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
CDS-3UTR CAA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGCCGCTGGGCCTCCAGTaGCTTCAGTGTGGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRPLGLQ*LQCGSP
Trigger: CGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGG...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGGGGCCGCGCTGCATTaGCCTCCTGCCGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLGAALH*PPAAGP
Trigger: AGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCC...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCACCCAGGGCTGCTGTTaGTCGGGCGCTGTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCTQGCC*SGAVRP
Trigger: TGGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGT...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGCGGGGCATGTGGGACTaGTGGGGGCAGCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VAVPAGSVPHAELPLGCRRGMWD*WGQLSS
Trigger: GCTGCTCAGCTGCCCCCACAAGTCCCACATGCCCCG...CCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS GCA 90 bp GCGGCTCAGTGCCAGGCGGCTTCGCCGGCGGCCCTTGTCCCCACTTaGCAGACAACCATTGTAGCAGCTGTGTGCCCTTGGGCCAGTCAC +
Preference number: 5 (lower is better)
Translates to: AAQCQAASPAALVPT*QTTIVAAVCPWASH
Trigger: GTGACTGGCCCAAGGGCACACAGCTGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAGCCGCCTGGCACTGAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000524466.5
ENST00000527230.1
CDS-3UTR CAA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGTCTGGCTTCACCCCGTaGGCGTGCGACCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQSGFTP*ACDRRL
Trigger: GAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGA...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CAA 90 bp GTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCACGGGGCATGTGGGACTaGTGGGGGCAGCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VWLCQQGVSHMQSSLWAARGMWD*WGQLSS
Trigger: GCTGCTCAGCTGCCCCCACAAGTCCCACATGCCCCG...TGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGTGGGGGCTGGAGGCATaGCACGCATGCGGGGCATGT +
Preference number: 5 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLWGLEA*HACGAC
Trigger: ACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCA...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS GCA 90 bp CCACGGTTACTCAGTGCCTTGGAGACGAGCGGCGTGGAGATGTGGTaGATGACGTCTGGCTTCACCCCGTTGGCGTGCGACCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: PRLLSALETSGVEMW*MTSGFTPLACDRRL
Trigger: GAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCGTCTCCAAGGCACTGAGTAACCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
CDS-3UTR CAA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGAACGCAAGAGCCCTaGTTCCCCCGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCRTQEP*FPRCWR
Trigger: CCTCCAGCACCGGGGGAACAAGGGCTCTTGCGTTCT...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GGGGCACATGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTCTGGCTTCACCCCGTaGGCGTGCGACCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: GAHGGHSGMMALVSQPTLSGFTP*ACDRRL
Trigger: GAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGA...GAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCATGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320740.12
ENST00000349459.10
CDS-3UTR CAA 90 bp CACCAGGACTCCATTGGTGGTCAGTCCATCCATCAGGCCATCTGGGGTCCGCCATCTGGCTTCACCCCGTaGGCGTGCGACCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: HQDSIGGQSIHQAIWGPPSGFTP*ACDRRL
Trigger: GAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGA...TGGCGGACCCCAGATGGCCTGATGGATGGACTGACCACCAATGGAGTCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CAA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGTCGTTTTCCACCAGCTaGCCCCGCTGCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLSFSTS*PRCWAE
Trigger: CTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGA...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCGGGGCCGCGCTGCATTaGCCTCCTGCCGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: LLREASLTFPLPVRPATAGAALH*PPAAGP
Trigger: AGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCC...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGACCCAGGGCTGCTGTTaGTCGGGCGCTGTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVTQGCC*SGAVRP
Trigger: TGGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGT...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCGTGTCTGAAACTGGGTaGGCAGGCTCAGGGCATAGC +
Preference number: 5 (lower is better)
Translates to: VAARCKGMARRPRVQAEAVSETG*AGSGHS
Trigger: GCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACAC...GGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS-3UTR CAA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGCCACCCACCACTCACTaGGGGGCTGGAGGCATTGCA +
Preference number: 5 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLPPTTH*GAGGIA
Trigger: TGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS TCA 90 bp GGTTACTCAGTGCCTTGGAGACGAGCGGCGTGGAGATGTGGTGCATaGCGTCTGGCTTCACCCCGTTGGCGTGCGACCGGCGGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: GYSVPWRRAAWRCGA*RLASPRWRATGGSV
Trigger: CACTGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCGTCTCCAAGGCACTGAGTAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
CDS GCA 90 bp CTGGCAAGGATAGGGGTGGGGAATGGAGCGGGCCACCTACCAGCTTaGCCCGCTGCTGGGCTGAGCGGCTGTCCCGCAATGTGTACACAT +
Preference number: 5 (lower is better)
Translates to: LARIGVGNGAGHLPA*PAAGLSGCPAMCTH
Trigger: ATGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTAGGTGGCCCGCTCCATTCCCCACCCCTATCCTTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCAGAACGCAAGAGCCCTaGTTCCCCCGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PWGWAFLHRPRTELVLKARTQEP*FPRCWR
Trigger: CCTCCAGCACCGGGGGAACAAGGGCTCTTGCGTTCT...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGCTTCGCCGGCGGCCCTaGTCCCCACTTGCCAGACAA +
Preference number: 5 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGLRRRP*SPLARQ
Trigger: TTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAG...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CAA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTTCTGGGGTCCGCCATTaGGCCGCTCGCTCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLSGVRH*AARSPR
Trigger: CCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAGA...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGAGGGGCCGCGCTGCATTaGCCTCCTGCCGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: EPVHRPSLLYRARFPSCGGAALH*PPAAGP
Trigger: AGGCCCAGCGGCAGGAGGCAAATGCAGCGCGGCCCC...TCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACCCAGGGCTGCTGTTaGTCGGGCGCTGTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: GFPPSTQDRAGAEGPISMTQGCC*SGAVRP
Trigger: TGGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGT...CATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGACGGGGCATGTGGGACTaGTGGGGGCAGCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGRGMWD*WGQLSS
Trigger: GCTGCTCAGCTGCCCCCACAAGTCCCACATGCCCCG...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGGGCTGGAGGCATaGCACGCATGCGGGGCATGT +
Preference number: 5 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLWGLEA*HACGAC
Trigger: ACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCA...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTTGGGGGCTGGAGGCATaGCACGCATGCGGGGCATGT +
Preference number: 5 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLWGLEA*HACGAC
Trigger: ACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCA...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CCATGGGGCTGGGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCACCCACCACTCACTaGGGGGCTGGAGGCATTGCA +
Preference number: 5 (lower is better)
Translates to: PWGWAFLHRPRTELVLKAPPTTH*GAGGIA
Trigger: TGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG...GGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCCCAGCCCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTCCACCCACCACTCACTaGGGGGCTGGAGGCATTGCA +
Preference number: 5 (lower is better)
Translates to: PPLTWGLEALHACGACGTPPTTH*GAGGIA
Trigger: TGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG...AGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GTGGCCGCAAGGTGCAAAGGCATGGCTAGGCGGCCCAGGGTCCAGGCAGAGGCCTCACAGCCGACACTCTaGACCAGTGAGTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: VAARCKGMARRPRVQAEASQPTL*TSESSL
Trigger: GAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTGA...GGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528752.1
ENST00000532970.5
CDS TCA 90 bp TGGGGAATGGAGCGGGCCACCTACCAGCTTGCCCCGCTGCTGGGCTaGGCGGCTGTCCCGCAATGTGTACACATTCCCACAGACCGAGAT +
Preference number: 5 (lower is better)
Translates to: WGMERATYQLAPLLG*AAVPQCVHIPTDRD
Trigger: ATCTCGGTCTGTGGGAATGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTAGGTGGCCCGCTCCATTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGGGCCCTTGTCCCCACTaGCCAGACAACCATTGTAGC +
Preference number: 5 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLGPCPH*PDNHCS
Trigger: GCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCC...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CAA 90 bp TGGACTCGTTTTCCACCAGCTTGCCCCGCTGCTGGGCTGAGCGGCTGTCCCGCAGGCCCTTGTCCCCACTaGCCAGACAACCATTGTAGC +
Preference number: 5 (lower is better)
Translates to: WTRFPPACPAAGLSGCPAGPCPH*PDNHCS
Trigger: GCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCC...TGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CAA 90 bp TGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAAGTGGCTCATTCTGGCTTCACCCCGTaGGCGTGCGACCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: CYAWGPWSVCLSVGQVAHSGFTP*ACDRRL
Trigger: GAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGA...ATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTCGGTTACTCAGTGCCTaGGAGACGAGCGGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLRLLSA*ETSGVE
Trigger: CTCCACGCCGCTCGTCTCCAAGGCACTGAGTAACCG...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000618547.4
CDS-3UTR CAA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCATCTGGGGTCCGCCATTaGGCCGCTCGCTCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPSGVRH*AARSPR
Trigger: CCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAGA...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTCTGGGGTCCGCCATTaGGCCGCTCGCTCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: EGHSPSNMSIWCGCASRESGVRH*AARSPR
Trigger: CCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAGA...CTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTCGTTTTCCACCAGCTaGCCCCGCTGCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLSFSTS*PRCWAE
Trigger: CTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGA...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GGGGGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGTCGTTTTCCACCAGCTaGCCCCGCTGCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: GGRAQPIQHVHLVWLCQQSFSTS*PRCWAE
Trigger: CTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGA...CTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGCCACCCACCACTCACTaGGGGGCTGGAGGCATTGCA +
Preference number: 5 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGPPTTH*GAGGIA
Trigger: TGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGAGGGCCACCTACCAGCTaGCCCCGCTGCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: QWYACYAWGPWSVCLSVGGPPTS*PRCWAE
Trigger: CTCAGCCCAGCAGCGGGGCAAGCTGGTAGGTGGCCC...TCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp AGAGCAGTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCAGAACGCAAGAGCCCTaGTTCCCCCGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: RAVHGQFEEHGHVTLDSPRTQEP*FPRCWR
Trigger: CCTCCAGCACCGGGGGAACAAGGGCTCTTGCGTTCT...GGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp GGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGCGGTTACTCAGTGCCTaGGAGACGAGCGGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: GFPPSTQDRAGAEGPISMRLLSA*ETSGVE
Trigger: CTCCACGCCGCTCGTCTCCAAGGCACTGAGTAACCG...CATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000618547.4
CDS-3UTR CAA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATCTGGGGTCCGCCATTaGGCCGCTCGCTCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: SPSNMSIWCGCASRECPTSGVRH*AARSPR
Trigger: CCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAGA...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CCAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGTCTGGGGTCCGCCATTaGGCCGCTCGCTCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: PVVCMLCLGTLVCLPVCGSGVRH*AARSPR
Trigger: CCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAGA...CCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp GGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGTCGTTTTCCACCAGCTaGCCCCGCTGCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: GFPPSTQDRAGAEGPISMSFSTS*PRCWAE
Trigger: CTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGA...CATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTCCGCTGGGCCTCCAGTaGCTTCAGTGTGGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCPLGLQ*LQCGSP
Trigger: CGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGG...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGCCGCTGGGCCTCCAGTaGCTTCAGTGTGGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: LSLCTGPPFCIEHASHLVPLGLQ*LQCGSP
Trigger: CGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGG...CACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAACGGGGCATGTGGGACTaGTGGGGGCAGCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKRGMWD*WGQLSS
Trigger: GCTGCTCAGCTGCCCCCACAAGTCCCACATGCCCCG...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CTCCTCCGTGAAGCCTCCCTCACTTTTCCATTACCAGTGAGGCCTGCCACAGCCTGGGGGCTGGAGGCATaGCACGCATGCGGGGCATGT +
Preference number: 5 (lower is better)
Translates to: LLREASLTFPLPVRPATAWGLEA*HACGAC
Trigger: ACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCA...GGCTGTGGCAGGCCTCACTGGTAATGGAAAAGTGAGGGAGGCTTCACGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCAGGAGGTGGGGACCTGCTGCCACAGCCTGATTaGTACTCTGATCCTGGCACG +
Preference number: 5 (lower is better)
Translates to: QGVSHMQSSLWAAGGGDLLPQPD*YSDPGT
Trigger: CGTGCCAGGATCAGAGTACAAATCAGGCTGTGGCAG...CAGGTCCCCACCTCCTGCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GGAAGGGCACAGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGATCCAGACTCCGCCTCTaGCGGCGATGCTCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: GRAQPIQHVHLVWLCQQGSRLRL*RRCSAF
Trigger: GAAGGCTGAGCATCGCCGCAAGAGGCGGAGTCTGGA...TCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCTGTGCCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349459.10
CDS CCA 90 bp CTGTCTGCCTGTCTGTGGGACAAGTGGCTCATGCTAAGAACCCCCTaGGCCTGGGATTCCCTGATATGGAGCCTGTTGGGGCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LSACLWDKWLMLRTP*AWDSLIWSLLGLPG
Trigger: CCCAGGGAGCCCCAACAGGCTCCATATCAGGGAATCCCAGGCCCAGGGGGTTCTTAGCATGAGCCACTTGTCCCACAGACAGGCAGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp ACAGAGGATGCGGCAGGCATAGCGGGAGATGGTGCTCTGGGCAGAAGGGCCCTCATGAGTTCACCATACTaGATGGGCTCCTCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: TEDAAGIAGDGALGRRALMSSPY*MGSSPG
Trigger: GCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCAT...GAGGGCCCTTCTGCCCAGAGCACCATCTCCCGCTATGCCTGCCGCATCCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CAA 90 bp GAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTCGCCGGCGGCCCTaGTCCCCACTTGCCAGACAA +
Preference number: 5 (lower is better)
Translates to: EPVHRPSLLYRARFPSCGLRRRP*SPLARQ
Trigger: TTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAG...TCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CAA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCCGGTTACTCAGTGCCTaGGAGACGAGCGGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGRLLSA*ETSGVE
Trigger: CTCCACGCCGCTCGTCTCCAAGGCACTGAGTAACCG...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000618547.4
CDS-3UTR CAA 90 bp CTGCCACCCACCCACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGTCTCCAAGGAAGATGTaGCTAGAGGCATCGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LPPTHHSLGGWRHCTHAGSPRKM*LEASKP
Trigger: TGGCTTCGATGCCTCTAGCAACATCTTCCTTGGAGA...CCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGGGTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTCCGCTGGGCCTCCAGTaGCTTCAGTGTGGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLPLGLQ*LQCGSP
Trigger: CGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGG...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTTGGGGGCTGGAGGCATaGCACGCATGCGGGGCATGT +
Preference number: 5 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCWGLEA*HACGAC
Trigger: ACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCA...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACACCACCCACCACTCACTaGGGGGCTGGAGGCATTGCA +
Preference number: 5 (lower is better)
Translates to: SPSNMSIWCGCASRECPTPPTTH*GAGGIA
Trigger: TGCAATGCCTCCAGCCCCCAAGTGAGTGGTGGGTGG...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTGGGCTGCTCTCTCCTCCCTTTGTaGACTCCTGACCGTCCACAA +
Preference number: 5 (lower is better)
Translates to: GVAVPAGSVPHAELPLGCSLLPL*TPDRPQ
Trigger: TTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA...GCAGCCCAGAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TGGACTCGTTTTCCACCAGCTTGCCCCGCTGCTGGGCTGAGCGGCTGTCCCGCATCTCTCCTCCCTTTGTaGACTCCTGACCGTCCACAA +
Preference number: 5 (lower is better)
Translates to: WTRFPPACPAAGLSGCPASLLPL*TPDRPQ
Trigger: TTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA...TGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTGGAAAACGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS-3UTR CAA 90 bp AGAGCAGTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCCTGATATGGAGCCTGTaGGGGCTCCCTGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: RAVHGQFEEHGHVTLDSPLIWSL*GLPGAE
Trigger: TTCTGCCCCAGGGAGCCCCAACAGGCTCCATATCAG...GGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCACTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CCA 90 bp GAGCGGCGTGGAGATGAGTTCACCATACTTGATGGGCTCCTCGCCTaGCTGCGCATCTTCACCGGGAGAGGAGAGAACGCAAGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: ERRGDEFTILDGLLA*LRIFTGRGENARAL
Trigger: AAGGGCTCTTGCGTTCTCTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCATCTCCACGCCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618547.4
CDS-3UTR CAA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTAGCAGCTGTGTGCCCTaGGGCCAGTCACTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCSSCVP*GQSLPL
Trigger: GAGGGGAAGTGACTGGCCCAAGGGCACACAGCTGCT...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320740.12
CDS-3UTR CAA 90 bp CAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACGGTTACTCAGTGCCTaGGAGACGAGCGGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: QWYACYAWGPWSVCLSVGRLLSA*ETSGVE
Trigger: CTCCACGCCGCTCGTCTCCAAGGCACTGAGTAACCG...TCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTCTGCCACAGCCTGATTaGTACTCTGATCCTGGCACG +
Preference number: 5 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLLPQPD*YSDPGT
Trigger: CGTGCCAGGATCAGAGTACAAATCAGGCTGTGGCAG...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTGTGTCACAGCCGACACTCTaGACCAGTGAGTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: HSLGGWRHCTHAGHVGLVSQPTL*TSESSL
Trigger: GAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTGA...CACAAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CACCACTCACTTGGGGGCTGGAGGCATTGCACGCATGCGGGGCATGTGGGACTTTCACAGCCGACACTCTaGACCAGTGAGTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: HHSLGGWRHCTHAGHVGLSQPTL*TSESSL
Trigger: GAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTGA...AAGTCCCACATGCCCCGCATGCGTGCAATGCCTCCAGCCCCCAAGTGAGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GTGCATGGCCAGTTTGAGGAGCACGGCCATGTGACCTTGGACAGCCCCTGCCTCGTATGCATGCTATGCTaGGGGACCCTGGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: VHGQFEEHGHVTLDSPCLVCMLC*GTLVCL
Trigger: CAGACAGACCAGGGTCCCCAAGCATAGCATGCATAC...GAGGCAGGGGCTGTCCAAGGTCACATGGCCGTGCTCCTCAAACTGGCCATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS GCA 90 bp CCCAGGACGATGAGTTCACCATACTTGATGGGCTCCTCGCCTGGCTaGGCATCTTCACCGGGAGAGGAGAGAACGCAAGAGCCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: PRTMSSPYLMGSSPG*ASSPGEERTQEPLF
Trigger: GAACAAGGGCTCTTGCGTTCTCTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCATCGTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000527230.1
ENST00000532970.5
CDS GCA 90 bp GGCGTGGAGATGAGTTCACCATACTTGATGGGCTCCTCGCCTGGCTaGGCATCTTCACCGGGAGAGGAGAGAACGCAAGAGCCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: GVEMSSPYLMGSSPG*ASSPGEERTQEPLF
Trigger: GAACAAGGGCTCTTGCGTTCTCTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCATCTCCACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618547.4
CDS CCA 90 bp GCATCCCAGGACGATGAGTTCACCATACTTGATGGGCTCCTCGCCTaGCTGCGCATCTTCACCGGGAGAGGAGAGAACGCAAGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: ASQDDEFTILDGLLA*LRIFTGRGENARAL
Trigger: AAGGGCTCTTGCGTTCTCTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCATCGTCCTGGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000524466.5
ENST00000527230.1
CDS CCA 90 bp GTAGCCCAGGACGATGAGTTCACCATACTTGATGGGCTCCTCGCCTaGCTGCGCATCTTCACCGGGAGAGGAGAGAACGCAAGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: VAQDDEFTILDGLLA*LRIFTGRGENARAL
Trigger: AAGGGCTCTTGCGTTCTCTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCATCGTCCTGGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349459.10
ENST00000532970.5
CDS CCA 90 bp GCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAAGTaGCTCATGCTAAGAACCCCCTGGGCCTGGGATTCCCTGATATGG +
Preference number: 5 (lower is better)
Translates to: AMLGDPGLSACLWDK*LMLRTPWAWDSLIW
Trigger: CCATATCAGGGAATCCCAGGCCCAGGGGGTTCTTAGCATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CCA 90 bp GGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTaGGACAAGTGGCTCATGCTAAGAACCCCCTGGGCCTGGGATTCC +
Preference number: 5 (lower is better)
Translates to: GMHAMLGDPGLSACL*DKWLMLRTPWAWDS
Trigger: GGAATCCCAGGCCCAGGGGGTTCTTAGCATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp GCATCTCCTTGGCCAATGTGCTCATGCCAGAGAAGAGCAGTGCATGGCCAGTTTCTTCGCCGGCGGCCCTaGTCCCCACTTGCCAGACAA +
Preference number: 5 (lower is better)
Translates to: ASPWPMCSCQRRAVHGQFLRRRP*SPLARQ
Trigger: TTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAG...AAACTGGCCATGCACTGCTCTTCTCTGGCATGAGCACATTGGCCAAGGAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp AGCCCATCCAACATGTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACAGTGTCTGAAACTGGGTaGGCAGGCTCAGGGCATAGC +
Preference number: 5 (lower is better)
Translates to: SPSNMSIWCGCASRECPTVSETG*AGSGHS
Trigger: GCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACAC...TGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGACATGTTGGATGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGTGTCTGAAACTGGGTaGGCAGGCTCAGGGCATAGC +
Preference number: 5 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGVSETG*AGSGHS
Trigger: GCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACAC...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CAGAGTCGAGCCCATAGTGGCTATCAGCAAGTGCTAGGCCCAGCCTGCCACCCATCACAGCCGACACTCTaGACCAGTGAGTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QSRAHSGYQQVLGPACHPSQPTL*TSESSL
Trigger: GAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTGA...TGGGTGGCAGGCTGGGCCTAGCACTTGCTGATAGCCACTATGGGCTCGACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAAGTGGCTCATAAGCTGCCAGCAGCCTaGAAGCCACCTGGGACTGCA +
Preference number: 5 (lower is better)
Translates to: CYAWGPWSVCLSVGQVAHKLPAA*KPPGTA
Trigger: TGCAGTCCCAGGTGGCTTCAAGGCTGCTGGCAGCTT...ATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCATGAGTTCACCATACTaGATGGGCTCCTCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGMSSPY*MGSSPG
Trigger: GCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCAT...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGGGCCCTTGTCCCCACTaGCCAGACAACCATTGTAGC +
Preference number: 5 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQGPCPH*PDNHCS
Trigger: GCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCC...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
CDS-3UTR CAA 90 bp TGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCGGCTCTCCAAGGAAGATGTaGCTAGAGGCATCGAAGCCA +
Preference number: 5 (lower is better)
Translates to: WDLWGQLSSEVYRGTQGGSPRKM*LEASKP
Trigger: TGGCTTCGATGCCTCTAGCAACATCTTCCTTGGAGA...GCCGCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GTCCATCTGGTGTGGCTGTGCCAGCAGGGAGTGTCCCACATGCAGAGCTCCCTCTCTCCAAGGAAGATGTaGCTAGAGGCATCGAAGCCA +
Preference number: 5 (lower is better)
Translates to: VHLVWLCQQGVSHMQSSLSPRKM*LEASKP
Trigger: TGGCTTCGATGCCTCTAGCAACATCTTCCTTGGAGA...GAGGGAGCTCTGCATGTGGGACACTCCCTGCTGGCACAGCCACACCAGATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCCGCTGGGCCTCCAGTaGCTTCAGTGTGGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILPLGLQ*LQCGSP
Trigger: CGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGG...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATACCCAGGGCTGCTGTTaGTCGGGCGCTGTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHTQGCC*SGAVRP
Trigger: TGGCCGCACAGCGCCCGACAAACAGCAGCCCTGGGT...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GGCTTTCCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGTCTCTCCTCCCTTTGTaGACTCCTGACCGTCCACAA +
Preference number: 5 (lower is better)
Translates to: GFPPSTQDRAGAEGPISMSLLPL*TPDRPQ
Trigger: TTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA...CATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGGAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CCTGAGCCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTATGAGTTCACCATACTaGATGGGCTCCTCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PEPVHRPSLLYRARFPSCMSSPY*MGSSPG
Trigger: GCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCAT...ACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGGCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAAGTGGCTCATATGAGTTCACCATACTaGATGGGCTCCTCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: CYAWGPWSVCLSVGQVAHMSSPY*MGSSPG
Trigger: GCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCAT...ATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATTCTGGGGTCCGCCATTaGGCCGCTCGCTCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHSGVRH*AARSPR
Trigger: CCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAGA...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CCTCCATCGACCCAGGACAGAGCTGGTGCTGAAGGCCCCATCAGCATGACTGGGACGCATGAAGCCGTGTaGCCATTTGTTAACAGTCTG +
Preference number: 5 (lower is better)
Translates to: PPSTQDRAGAEGPISMTGTHEAV*PFVNSL
Trigger: CAGACTGTTAACAAATGGCAACACGGCTTCATGCGT...CCCAGTCATGCTGATGGGGCCTTCAGCACCAGCTCTGTCCTGGGTCGATGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TCTGAAACTGGGTTGGCAGGCTCAGGGCATAGCCAGCCTAAGCTGGGGGTCAAATCACAGCCGACACTCTaGACCAGTGAGTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SETGLAGSGHSQPKLGVKSQPTL*TSESSL
Trigger: GAGAGAGGACTCACTGGTCAAGAGTGTCGGCTGTGA...TTTGACCCCCAGCTTAGGCTGGCTATGCCCTGAGCCTGCCAACCCAGTTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCAGAACGCAAGAGCCCTaGTTCCCCCGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILRTQEP*FPRCWR
Trigger: CCTCCAGCACCGGGGGAACAAGGGCTCTTGCGTTCT...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp GCTGCCACTAACACCTGTGTCAGAACTACTGTAAGGACCCTTTCCTCCTGCGAGGGCCCTTGTCCCCACTaGCCAGACAACCATTGTAGC +
Preference number: 5 (lower is better)
Translates to: AATNTCVRTTVRTLSSCEGPCPH*PDNHCS
Trigger: GCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCC...CTCGCAGGAGGAAAGGGTCCTTACAGTAGTTCTGACACAGGTGTTAGTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp CCAGTGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTGGGTCTCCAAGGAAGATGTaGCTAGAGGCATCGAAGCCA +
Preference number: 5 (lower is better)
Translates to: PVVCMLCLGTLVCLPVCGSPRKM*LEASKP
Trigger: TGGCTTCGATGCCTCTAGCAACATCTTCCTTGGAGA...CCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp ATGTGGGACTTGTGGGGGCAGCTGAGCAGCGAGGTTTATAGAGGAACCCAGGGCTCTCCAAGGAAGATGTaGCTAGAGGCATCGAAGCCA +
Preference number: 5 (lower is better)
Translates to: MWDLWGQLSSEVYRGTQGSPRKM*LEASKP
Trigger: TGGCTTCGATGCCTCTAGCAACATCTTCCTTGGAGA...GCCCTGGGTTCCTCTATAAACCTCGCTGCTCAGCTGCCCCCACAAGTCCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CAGCTCTCTGATCTGTACCACAAGGAGCTGCCACTAACACCTGTGTCAGAACTAAGATCATCTCCTGGCTaGGGCAGGGGGATGGGCAGC +
Preference number: 5 (lower is better)
Translates to: QLSDLYHKELPLTPVSELRSSPG*GRGMGS
Trigger: GCTGCCCATCCCCCTGCCCAAGCCAGGAGATGATCT...TAGTTCTGACACAGGTGTTAGTGGCAGCTCCTTGTGGTACAGATCAGAGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTTCTCTCCTCCCTTTGTaGACTCCTGACCGTCCACAA +
Preference number: 5 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLSLLPL*TPDRPQ
Trigger: TTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGAGAACGCAAGAGCCCTaGTTCCCCCGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWRTQEP*FPRCWR
Trigger: CCTCCAGCACCGGGGGAACAAGGGCTCTTGCGTTCT...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000618547.4
CDS-3UTR CAA 90 bp TGGTGGGCATTCAGGGATGATGGCCCTTGTGTCACAGCCGACACTCTTGACCAGACGCATGAAGCCGTGTaGCCATTTGTTAACAGTCTG +
Preference number: 5 (lower is better)
Translates to: WWAFRDDGPCVTADTLDQTHEAV*PFVNSL
Trigger: CAGACTGTTAACAAATGGCAACACGGCTTCATGCGT...CTGGTCAAGAGTGTCGGCTGTGACACAAGGGCCATCATCCCTGAATGCCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATGGAAAGCAGCTGCAGTaGACCAGAGTCGCAGACCTG +
Preference number: 5 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHGKQLQ*TRVADL
Trigger: CAGGTCTGCGACTCTGGTCAACTGCAGCTGCTTTCC...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618547.4
CDS-3UTR CAA 90 bp CCTGTGCACAGGCCCTCCCTTCTGTATAGAGCACGCTTCCCATCTTGTGGACTTACGCATGAAGCCGTGTaGCCATTTGTTAACAGTCTG +
Preference number: 5 (lower is better)
Translates to: PVHRPSLLYRARFPSCGLTHEAV*PFVNSL
Trigger: CAGACTGTTAACAAATGGCAACACGGCTTCATGCGT...AAGTCCACAAGATGGGAAGCGTGCTCTATACAGAAGGGAGGGCCTGTGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TCTCTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCTGCCACAGCCTGATTaGTACTCTGATCCTGGCACG +
Preference number: 5 (lower is better)
Translates to: SLLPLLTPDRPQMRFRILLPQPD*YSDPGT
Trigger: CGTGCCAGGATCAGAGTACAAATCAGGCTGTGGCAG...GAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp CAGCTCTCTGATCTGTACCACAAGGAGCTGCCACTAACACCTGTGTCAGAACTAATGTCTGTGTGTGCCTaGATCGCATCACCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: QLSDLYHKELPLTPVSELMSVCA*IASPPG
Trigger: TCCAGGGGGTGATGCGATCAAGGCACACACAGACAT...TAGTTCTGACACAGGTGTTAGTGGCAGCTCCTTGTGGTACAGATCAGAGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp GTGATAGACATGCTACAAACTGCCAACCCTTTAGGCTATAAACTGCTCACACATAGCAGCTGTGTGCCCTaGGGCCAGTCACTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: VIDMLQTANPLGYKLLTHSSCVP*GQSLPL
Trigger: GAGGGGAAGTGACTGGCCCAAGGGCACACAGCTGCT...ATGTGTGAGCAGTTTATAGCCTAAAGGGTTGGCAGTTTGTAGCATGTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS-3UTR CAA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGGTGTCTGAAACTGGGTaGGCAGGCTCAGGGCATAGC +
Preference number: 5 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWVSETG*AGSGHS
Trigger: GCTATGCCCTGAGCCTGCCAACCCAGTTTCAGACAC...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000618547.4
CDS-3UTR CAA 90 bp CTCCTCCCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATTCTCTCCTCCCTTTGTaGACTCCTGACCGTCCACAA +
Preference number: 5 (lower is better)
Translates to: LLPLLTPDRPQMRFRILHSLLPL*TPDRPQ
Trigger: TTGTGGACGGTCAGGAGTCAACAAAGGGAGGAGAGA...ATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TCAATGGACGTAGTTATTATTATCATCATCAGCACAGTGCGGGGCACATGGTGGATGAGTTCACCATACTaGATGGGCTCCTCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: SMDVVIIIIISTVRGTWWMSSPY*MGSSPG
Trigger: GCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCAT...CCACCATGTGCCCCGCACTGTGCTGATGATGATAATAATAACTACGTCCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000618547.4
CDS-3UTR CAA 90 bp CCTTTGTTGACTCCTGACCGTCCACAAATGAGGTTCAGAATCCTCCATCCAGCAACGCATGAAGCCGTGTaGCCATTTGTTAACAGTCTG +
Preference number: 5 (lower is better)
Translates to: PLLTPDRPQMRFRILHPATHEAV*PFVNSL
Trigger: CAGACTGTTAACAAATGGCAACACGGCTTCATGCGT...TGCTGGATGGAGGATTCTGAACCTCATTTGTGGACGGTCAGGAGTCAACAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000528752.1
ENST00000532970.5
ENST00000618547.4
CDS-3UTR CAA 90 bp TTTAACAAACAATGCTTCCCCAGACCTCCCCACAGAGTTGACGCTCTGGAAAGACTTTTCTCTGAGGTTTaGCATCTCCTTGGCCAATGT +
Preference number: 5 (lower is better)
Translates to: FNKQCFPRPPHRVDALERLFSEV*HLLGQC
Trigger: ACATTGGCCAAGGAGATGCAAAACCTCAGAGAAAAG...TCTTTCCAGAGCGTCAACTCTGTGGGGAGGTCTGGGGAAGCATTGTTTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS GCA 72 bp TGGCTTCACCCCGTTGGCGTGCGACCGGCGGCTCAGTaGCAGGCGGCTTCGCCGGCGGCCCTTGTCCCCACT +
Preference number: 6 (lower is better)
Translates to: WLHPVGVRPAAQ*QAASPAALVPT
Trigger: AGTGGGGACAAGGGCCGCCGGCGAAGCCGCCTGGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
ENST00000527230.1
ENST00000532970.5
CDS CAA 90 bp ACGAGCGGCGTGGAGATGTGGTGCATGACGTCTGGCTTCACCCCGTaGGCGTGCGACCGGCGGCTCAGTGCCAGGCGGCTTCGCCGGCGG +
Preference number: 6 (lower is better)
Translates to: TSGVEMWCMTSGFTP*ACDRRLSARRLRRR
Trigger: CCGCCGGCGAAGCCGCCTGGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
ENST00000527230.1
CDS CAA 90 bp CAGAGCGGCGTGGAGATGTGGTGCATGACGTCTGGCTTCACCCCGTaGGCGTGCGACCGGCGGCTCAGTGCCAGGCGGCTTCGCCGGCGG +
Preference number: 6 (lower is better)
Translates to: QSGVEMWCMTSGFTP*ACDRRLSARRLRRR
Trigger: CCGCCGGCGAAGCCGCCTGGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS GCA 72 bp ATGTGGTGCATGACGTCTGGCTTCACCCCGTTGGCGTaGGACCGGCGGCTCAGTGCCAGGCGGCTTCGCCGG +
Preference number: 6 (lower is better)
Translates to: MWCMTSGFTPLA*DRRLSARRLRR
Trigger: CCGGCGAAGCCGCCTGGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
ENST00000527230.1
ENST00000532970.5
CDS GCA 72 bp TGCCAGGCGGCTTCGCCGGCGGCCCTTGTCCCCACTTaGCAGACAACCATTGTAGCTGGCCACGCTCCGGGC +
Preference number: 6 (lower is better)
Translates to: CQAASPAALVPT*QTTIVAGHAPG
Trigger: GCCCGGAGCGTGGCCAGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAGCCGCCTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526296.5
CDS CAA 72 bp GTGCCAGGCGGCTTCGCCGGCGGCCCTTGTCCCCACTaGCCAGACAACCATTGTAGCTGGCCACGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: VPGGFAGGPCPH*PDNHCSWPRSG
Trigger: CCCGGAGCGTGGCCAGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAGCCGCCTGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526296.5
CDS GCA 72 bp ATAGGGGTGGGGAATGGAGCGGGCCACCTACCAGCTTaGCCCGCTGCTGGGCTGAGCGGCTGTCCCGCAATG +
Preference number: 6 (lower is better)
Translates to: IGVGNGAGHLPA*PAAGLSGCPAM
Trigger: CATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTAGGTGGCCCGCTCCATTCCCCACCCCTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CCA 72 bp GGAGACGAGCGGCGTGGAGATGTGGTGCATGACGTCTaGCTTCACCCCGTTGGCGTGCGACCGGCGGCTCAG +
Preference number: 6 (lower is better)
Translates to: GDERRGDVVHDV*LHPVGVRPAAQ
Trigger: CTGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
ENST00000527230.1
CDS CAA 72 bp CCTAGGAGAGCTCCGCCTCGCTCCAGACTCCGCCTCTaGCGGCGATGCTCAGCCTTCGTAGGCGGAGCTCCG +
Preference number: 6 (lower is better)
Translates to: PRRAPPRSRLRL*RRCSAFVGGAP
Trigger: CGGAGCTCCGCCTACGAAGGCTGAGCATCGCCGCAAGAGGCGGAGTCTGGAGCGAGGCGGAGCTCTCCTAGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349459.10
CDS CAA 90 bp GGCGGCTCAGTGCCAGGCGGCTTCGCCGGCGGCCCTTGTCCCCACTaGCCAGACAACCATTGTAGCAGCTGTGTGCCCTTGGGCCAGTCA +
Preference number: 6 (lower is better)
Translates to: GGSVPGGFAGGPCPH*PDNHCSSCVPLGQS
Trigger: TGACTGGCCCAAGGGCACACAGCTGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAGCCGCCTGGCACTGAGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000524466.5
ENST00000527230.1
CDS TCA 72 bp GTGCCTTGGAGACGAGCGGCGTGGAGATGTGGTGCATaGCGTCTGGCTTCACCCCGTTGGCGTGCGACCGGC +
Preference number: 6 (lower is better)
Translates to: VPWRRAAWRCGA*RLASPRWRATG
Trigger: GCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCGTCTCCAAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
CDS GCA 72 bp GGGGAATGGAGCGGGCCACCTACCAGCTTGCCCCGCTaGTGGGCTGAGCGGCTGTCCCGCAATGTGTACACA +
Preference number: 6 (lower is better)
Translates to: GEWSGPPTSLPR*WAERLSRNVYT
Trigger: TGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTAGGTGGCCCGCTCCATTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CCA 72 bp GGGCTCCCTGGGGCAGAAGGACTGGAGATCATCTCCTaGCTTGGGCAGGGGGATGGGCAGCTTGTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: GLPGAEGLEIIS*LGQGDGQLVRA
Trigger: GGCCCTCACAAGCTGCCCATCCCCCTGCCCAAGCCAGGAGATGATCTCCAGTCCTTCTGCCCCAGGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CCA 72 bp CGGCCTCCCCCTGCGGGTAGGCCAATAGACTCCTCCTaGGTGCGCGCTCTTCCCTCCCTCAGGTGTCTGTCT +
Preference number: 6 (lower is better)
Translates to: RPPPAGRPIDSS*VRALPSLRCLS
Trigger: AGACAGACACCTGAGGGAGGGAAGAGCGCGCACCCAGGAGGAGTCTATTGGCCTACCCGCAGGGGGAGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527230.1
CDS CAA 72 bp GTGGAGATGTGGTGCATGACGTCTGGCTTCACCCCGTaGGCGTGCGACCGGCGGCTCAGTGCCAGGCGGCTT +
Preference number: 6 (lower is better)
Translates to: VEMWCMTSGFTP*ACDRRLSARRL
Trigger: AAGCCGCCTGGCACTGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
ENST00000527230.1
ENST00000532970.5
CDS TCA 72 bp GAGCGGGCCACCTACCAGCTTGCCCCGCTGCTGGGCTaGGCGGCTGTCCCGCAATGTGTACACATTCCCACA +
Preference number: 6 (lower is better)
Translates to: ERATYQLAPLLG*AAVPQCVHIPT
Trigger: TGTGGGAATGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTAGGTGGCCCGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS GCA 72 bp TGCCAGGCGGCTTCGCCGGCGGCCCTTGTCCCCACTTaGCAGACAACCATTGTAGCAGCTGTGTGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: CQAASPAALVPT*QTTIVAAVCPW
Trigger: CCAAGGGCACACAGCTGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAGCCGCCTGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000524466.5
ENST00000527230.1
CDS CCA 72 bp AAGTCAGAGCGGCGTGGAGATGTGGTGCATGACGTCTaGCTTCACCCCGTTGGCGTGCGACCGGCGGCTCAG +
Preference number: 6 (lower is better)
Translates to: KSERRGDVVHDV*LHPVGVRPAAQ
Trigger: CTGAGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCTGACTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532970.5
CDS GCA 72 bp CTCAGTGCCTTGGAGACGAGCGGCGTGGAGATGTGGTaGATGACGTCTGGCTTCACCCCGTTGGCGTGCGAC +
Preference number: 6 (lower is better)
Translates to: LSALETSGVEMW*MTSGFTPLACD
Trigger: GTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCGTCTCCAAGGCACTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
CDS GCA 72 bp TGCCAGGCGGCTTCGCCGGCGGCCCTTGTCCCCACTTaGCAGACAACCATTGTAGCCCAGGACGATGAGTTC +
Preference number: 6 (lower is better)
Translates to: CQAASPAALVPT*QTTIVAQDDEF
Trigger: GAACTCATCGTCCTGGGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAGCCGCCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349459.10
ENST00000532970.5
CDS CCA 72 bp GAATGGAGCGGGCCACCTACCAGCTTGCCCCGCTGCTaGGCTGAGCGGCTGTCCCGCAATGTGTACACATTC +
Preference number: 6 (lower is better)
Translates to: EWSGPPTSLPRC*AERLSRNVYTF
Trigger: GAATGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGTAGGTGGCCCGCTCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CAA 72 bp GCATCTTCACCGGGAGAGGAGAGAACGCAAGAGCCCTaGTTCCCCCGGTGCTGGAGGTCTGAGGTTCGGGGG +
Preference number: 6 (lower is better)
Translates to: ASSPGEERTQEP*FPRCWRSEVRG
Trigger: CCCCCGAACCTCAGACCTCCAGCACCGGGGGAACAAGGGCTCTTGCGTTCTCTCCTCTCCCGGTGAAGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000527230.1
ENST00000532970.5
ENST00000618547.4
CDS CCA 72 bp AGGACTGGAGATCATCTCCTGGCTTGGGCAGGGGGATaGGCAGCTTGTGAGGGCCTGGCAAGGATAGGGGTG +
Preference number: 6 (lower is better)
Translates to: RTGDHLLAWAGG*AACEGLARIGV
Trigger: CACCCCTATCCTTGCCAGGCCCTCACAAGCTGCCCATCCCCCTGCCCAAGCCAGGAGATGATCTCCAGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CCA 72 bp GGGGACCCTGGTCTGTCTGCCTGTCTGTGGGACAAGTaGCTCATGCTAAGAACCCCCTGGGCCTGGGATTCC +
Preference number: 6 (lower is better)
Translates to: GDPGLSACLWDK*LMLRTPWAWDS
Trigger: GGAATCCCAGGCCCAGGGGGTTCTTAGCATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CCA 72 bp TTACTCAGTGCCTTGGAGACGAGCGGCGTGGAGATGTaGTGCATGACGTCTGGCTTCACCCCGTTGGCGTGC +
Preference number: 6 (lower is better)
Translates to: LLSALETSGVEM*CMTSGFTPLAC
Trigger: GCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCGTCTCCAAGGCACTGAGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
CDS CCA 72 bp GCTATGCTTGGGGACCCTGGTCTGTCTGCCTGTCTGTaGGACAAGTGGCTCATGCTAAGAACCCCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: AMLGDPGLSACL*DKWLMLRTPWA
Trigger: GGCCCAGGGGGTTCTTAGCATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CCA 72 bp GAGGCAGTAGAAGGGCCTTACAGCTTGCCCCGCTGCTaGGCTGAGCGGCTGTCCCGCAATGTGTACACATTC +
Preference number: 6 (lower is better)
Translates to: EAVEGPYSLPRC*AERLSRNVYTF
Trigger: GAATGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGTAAGGCCCTTCTACTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528752.1
CDS TCA 72 bp GAGTGGCTCCGGGACAGTGTATACGAGATGCTGTGCTaGCCACGGTTACTCAGTGCCTTGGAGACGAGCGGC +
Preference number: 6 (lower is better)
Translates to: EWLRDSVYEMLC*PRLLSALETSG
Trigger: GCCGCTCGTCTCCAAGGCACTGAGTAACCGTGGTCAGCACAGCATCTCGTATACACTGTCCCGGAGCCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000526296.5
ENST00000618547.4
CDS TCA 72 bp AGTAGAAGGGCCTTACAGCTTGCCCCGCTGCTGGGCTaGGCGGCTGTCCCGCAATGTGTACACATTCCCACA +
Preference number: 6 (lower is better)
Translates to: SRRALQLAPLLG*AAVPQCVHIPT
Trigger: TGTGGGAATGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGTAAGGCCCTTCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528752.1
CDS CCA 72 bp CTGGGATTCCCTGATATGGAGCCTGTTGGGGCTCCCTaGGGCAGAAGGACTGGAGATCATCTCCTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: LGFPDMEPVGAP*GRRTGDHLLAW
Trigger: CCAAGCCAGGAGATGATCTCCAGTCCTTCTGCCCCAGGGAGCCCCAACAGGCTCCATATCAGGGAATCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CCA 72 bp TGGGACAAGTGGCTCATGCTAAGAACCCCCTGGGCCTaGGATTCCCTGATATGGAGCCTGTTGGGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: WDKWLMLRTPWA*DSLIWSLLGLP
Trigger: AGGGAGCCCCAACAGGCTCCATATCAGGGAATCCCAGGCCCAGGGGGTTCTTAGCATGAGCCACTTGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CAA 72 bp TTGGAGACGAGCGGCGTGGAGATGAGTTCACCATACTaGATGGGCTCCTCGCCTGGCTGCGCATCTTCACCG +
Preference number: 6 (lower is better)
Translates to: LETSGVEMSSPY*MGSSPGCASSP
Trigger: CGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCATCTCCACGCCGCTCGTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618547.4
CDS CAA 90 bp TCACCTCCTTCCTCACAGCATCCCAGGACGATGAGTTCACCATACTaGATGGGCTCCTCGCCTGGCTGCGCATCTTCACCGGGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: SPPSSQHPRTMSSPY*MGSSPGCASSPGEE
Trigger: CTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCATCGTCCTGGGATGCTGTGAGGAAGGAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000524466.5
ENST00000527230.1
CDS CCA 72 bp GACGATGAGTTCACCATACTTGATGGGCTCCTCGCCTaGCTGCGCATCTTCACCGGGAGAGGAGAGAACGCA +
Preference number: 6 (lower is better)
Translates to: DDEFTILDGLLA*LRIFTGRGENA
Trigger: TGCGTTCTCTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCATCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000527230.1
ENST00000532970.5
CDS CCA 72 bp TGTCTGTGGGACAAGTGGCTCATGCTAAGAACCCCCTaGGCCTGGGATTCCCTGATATGGAGCCTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: CLWDKWLMLRTP*AWDSLIWSLLG
Trigger: CCCCAACAGGCTCCATATCAGGGAATCCCAGGCCCAGGGGGTTCTTAGCATGAGCCACTTGTCCCACAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524466.5
CDS CCA 72 bp GGAGATGAGTTCACCATACTTGATGGGCTCCTCGCCTaGCTGCGCATCTTCACCGGGAGAGGAGAGAACGCA +
Preference number: 6 (lower is better)
Translates to: GDEFTILDGLLA*LRIFTGRGENA
Trigger: TGCGTTCTCTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618547.4
CDS CAA 72 bp TCCTCACAGCATCCCAGGACGATGAGTTCACCATACTaGATGGGCTCCTCGCCTGGCTGCGCATCTTCACCG +
Preference number: 6 (lower is better)
Translates to: SSQHPRTMSSPY*MGSSPGCASSP
Trigger: CGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCATCGTCCTGGGATGCTGTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320740.12
ENST00000524466.5
ENST00000527230.1
CDS GCA 72 bp ATGAGTTCACCATACTTGATGGGCTCCTCGCCTGGCTaGGCATCTTCACCGGGAGAGGAGAGAACGCAAGAG +
Preference number: 6 (lower is better)
Translates to: MSSPYLMGSSPG*ASSPGEERTQE
Trigger: CTCTTGCGTTCTCTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320740.12
ENST00000349459.10
ENST00000524466.5
ENST00000527230.1
ENST00000532970.5
ENST00000618547.4
CDS GCA 72 bp TGGTATGCATGCTATGCTTGGGGACCCTGGTCTGTCTaGCTGTCTGTGGGACAAGTGGCTCATGCTAAGAAC +
Preference number: 6 (lower is better)
Translates to: WYACYAWGPWSV*LSVGQVAHAKN
Trigger: GTTCTTAGCATGAGCCACTTGTCCCACAGACAGGCAGACAGACCAGGGTCCCCAAGCATAGCATGCATACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524466.5