RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PEG10 (Homo sapiens)

Ensembl gene IDs: ENSG00000242265

Ensembl transcript IDs: ENST00000465184.1, ENST00000482108.1, ENST00000488574.5, ENST00000493935.1, ENST00000612748.1, ENST00000612941.2, ENST00000613043.1, ENST00000615790.5, ENST00000617526.4

Found 1277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTAAGATGGAGGCGGCGGCGGTGGTGGTGGTGGAGGCGGCGGCTGTaGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGG +
Preference number: 1 (lower is better)
Translates to: VRWRRRRWWWWRRRL*RRVLWYRRLAVPVW
Trigger: CCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCCACCACCACCACCGCCGCCGCCTCCATCTTAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp TATTTACAGGGTACTGTAAGATGGAGGCGGCGGCGGTGGTGGTGGTaGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTG +
Preference number: 1 (lower is better)
Translates to: YLQGTVRWRRRRWWW*RRRLWRRVLWYRRL
Trigger: CAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCCACCACCACCACCGCCGCCGCCTCCATCTTACAGTACCCTGTAAATA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp AGGTATTTACAGGGTACTGTAAGATGGAGGCGGCGGCGGTGGTGGTaGTGGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGG +
Preference number: 1 (lower is better)
Translates to: RYLQGTVRWRRRRWW*WRRRLWRRVLWYRR
Trigger: CCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCCACCACCACCACCGCCGCCGCCTCCATCTTACAGTACCCTGTAAATACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp GACAGGTATTTACAGGGTACTGTAAGATGGAGGCGGCGGCGGTGGTaGTGGTGGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGG +
Preference number: 1 (lower is better)
Translates to: DRYLQGTVRWRRRRW*WWRRRLWRRVLWYR
Trigger: CCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCCACCACCACCACCGCCGCCGCCTCCATCTTACAGTACCCTGTAAATACCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp CATGACAGGTATTTACAGGGTACTGTAAGATGGAGGCGGCGGCGGTaGTGGTGGTGGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTAC +
Preference number: 1 (lower is better)
Translates to: HDRYLQGTVRWRRRR*WWWRRRLWRRVLWY
Trigger: GTACCACAGTACCCGCCGCCACAGCCGCCGCCTCCACCACCACCACCGCCGCCGCCTCCATCTTACAGTACCCTGTAAATACCTGTCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp AGAGATCCTGAAGGACATGACAGGTATTTACAGGGTACTGTAAGATaGAGGCGGCGGCGGTGGTGGTGGTGGAGGCGGCGGCTGTGGCGG +
Preference number: 1 (lower is better)
Translates to: RDPEGHDRYLQGTVR*RRRRWWWWRRRLWR
Trigger: CCGCCACAGCCGCCGCCTCCACCACCACCACCGCCGCCGCCTCCATCTTACAGTACCCTGTAAATACCTGTCATGTCCTTCAGGATCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR CCA 90 bp TCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTaGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGGTATCC +
Preference number: 1 (lower is better)
Translates to: SSLSVSSHWVPGESY*VGRVRGICGVCLVS
Trigger: GGATACCAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR GCA 90 bp TCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATaGCAGGGCTACAGACAACGGCCCATTTCTAGGCACCCTGCAGCT +
Preference number: 1 (lower is better)
Translates to: SPDFCLQWWQMSVCT*QGYRQRPISRHPAA
Trigger: AGCTGCAGGGTGCCTAGAAATGGGCCGTTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAAGTCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 90 bp CAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATaGTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTC +
Preference number: 1 (lower is better)
Translates to: QVNYQVVSFVDNWAR*YGAPINCFHKYWPV
Trigger: GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR GCA 90 bp CAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTaGCCGGAAGATGAATCTGGAGCATCACTTGCAAGTGTGGAGATG +
Preference number: 1 (lower is better)
Translates to: QKHQNRSWLGRTGCV*PEDESGASLASVEM
Trigger: CATCTCCACACTTGCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp GTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTaGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTAT +
Preference number: 1 (lower is better)
Translates to: VISQVNYQVVSFVDN*ARCYGAPINCFHKY
Trigger: ATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp TACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATaGTGGTATTGGAGAATACATCCGGCAGTGGTAGCGGCAGTATTC +
Preference number: 1 (lower is better)
Translates to: YWIIEWRLWCWWWER*WYWRIHPAVVAAVF
Trigger: GAATACTGCCGCTACCACTGCCGGATGTATTCTCCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR TCA 90 bp TCTGCCCGGAAGATGAATCTGGAGCATCACTTGCAAGTGTGGAGATaGGGCATCATCTTGTGGGGACCTTATTATTTCTGGCCCGGTCGC +
Preference number: 1 (lower is better)
Translates to: SARKMNLEHHLQVWR*GIILWGPYYFWPGR
Trigger: GCGACCGGGCCAGAAATAATAAGGTCCCCACAAGATGATGCCTCATCTCCACACTTGCAAGTGATGCTCCAGATTCATCTTCCGGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR TCA 90 bp GAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATaGATCTGGAGCATCACTTGCAAGTGTGGAGATGAGGCATCATCT +
Preference number: 1 (lower is better)
Translates to: ESIMARTNRVCLPGR*IWSITCKCGDEASS
Trigger: AGATGATGCCTCATCTCCACACTTGCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR TCA 90 bp GGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTaGTCATCACAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTC +
Preference number: 1 (lower is better)
Translates to: GTVVPEAGGTSVDSK*SSQVHIVIFLVRLV
Trigger: GACGAGACGGACAAGGAAGATCACTATATGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp ATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTaGAGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAA +
Preference number: 1 (lower is better)
Translates to: IEWRLWCWWWERWWY*RIHPAVVAAVFRIK
Trigger: TTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCTCCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR GCA 90 bp TCCCTAATCGTTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTaGAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGAC +
Preference number: 1 (lower is better)
Translates to: SLIVLVVGELLQTFA*SGGKCPCAHARATD
Trigger: GTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAACGATTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CCA 90 bp AACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTaGTGGTGGGAGCGATGGTGGTATTGGAGAATACATCCGGCAGTG +
Preference number: 1 (lower is better)
Translates to: NSVSIYWIIEWRLWC*WWERWWYWRIHPAV
Trigger: CACTGCCGGATGTATTCTCCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp CCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTaGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGAGA +
Preference number: 1 (lower is better)
Translates to: PHWLVNSVSIYWIIE*RLWCWWWERWWYWR
Trigger: TCTCCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp GGTACCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTaGGGTATGTTTGGTATCCAGGTATTTGAGGTACGAATTCAGTGT +
Preference number: 1 (lower is better)
Translates to: GTRRILLGRSGTRHM*GMFGIQVFEVRIQC
Trigger: ACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR TCA 90 bp GTCGGGTACGCGGCATATGTGGGGTATGTTTGGTATCCAGGTATTTaGGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCT +
Preference number: 1 (lower is better)
Translates to: VGYAAYVGYVWYPGI*GTNSVYVARCAWSS
Trigger: AGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCGCGTACCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp GTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTaGAGTGTACACATTCTGGACATAGTAATACCTCACTGGTTGGTA +
Preference number: 1 (lower is better)
Translates to: VRVNQAVIWVDVLIY*SVHILDIVIPHWLV
Trigger: TACCAACCAGTGAGGTATTACTATGTCCAGAATGTGTACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp TTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTaGTGCTGGTGGTGGGAGCGATGGTGGTATTGGAGAATACATCCG +
Preference number: 1 (lower is better)
Translates to: LVNSVSIYWIIEWRL*CWWWERWWYWRIHP
Trigger: CGGATGTATTCTCCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp GACATAGTAATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTaGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGG +
Preference number: 1 (lower is better)
Translates to: DIVIPHWLVNSVSIY*IIEWRLWCWWWERW
Trigger: CCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATTACTATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp TGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCGGTGATCTaGGTAGACGTGCTCATCTACTGGAGTGTACACATTCTGGACATA +
Preference number: 1 (lower is better)
Translates to: CSRYHFYVRVNQAVI*VDVLIYWSVHILDI
Trigger: TATGTCCAGAATGTGTACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp CAGTCTCATCAGATGTGCATTCTCTCTTTAGATGAAAATGTAGCATaGTTCCCGCAGGGCTCTCCATTTCTGCCCAGGTCTTTCCAGCAG +
Preference number: 1 (lower is better)
Translates to: QSHQMCILSLDENVA*FPQGSPFLPRSFQQ
Trigger: CTGCTGGAAAGACCTGGGCAGAAATGGAGAGCCCTGCGGGAACCATGCTACATTTTCATCTAAAGAGAGAATGCACATCTGATGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 90 bp AGGGTTTTTCCTGCTCCTGGGAGAACCAGTCGAGTTGCTGCTCCTTaGGAATTAACAGAACCATGGAAATGGAGTTTGAAGACGGTGAAG +
Preference number: 1 (lower is better)
Translates to: RVFPAPGRTSRVAAP*ELTEPWKWSLKTVK
Trigger: CTTCACCGTCTTCAAACTCCATTTCCATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCGACTGGTTCTCCCAGGAGCAGGAAAAACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 90 bp TCTTGCCACAAAATCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTaGATACACATGTCCACTGGGAATACTGTGTGCTCCAGGTATCAT +
Preference number: 1 (lower is better)
Translates to: SCHKISKSCHFRFGQ*IHMSTGNTVCSRYH
Trigger: ATGATACCTGGAGCACACAGTATTCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGATTTTGTGGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR TCA 90 bp CTAACCTTCCATAGCCGTTTCAGAGAGGATGTGCCTCAGGTGGCCTaGAGATACAGTAGCCTAAAATTTAGCACACAGTCACTGATTGAG +
Preference number: 1 (lower is better)
Translates to: LTFHSRFREDVPQVA*RYSSLKFSTQSLIE
Trigger: CTCAATCAGTGACTGTGTGCTAAATTTTAGGCTACTGTATCTTCAGGCCACCTGAGGCACATCCTCTCTGAAACGGCTATGGAAGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 90 bp GTTAACCCACAGCAGCATATTTTCCCTAATCGTTCTTGTCGTTGGTaGACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCCGTG +
Preference number: 1 (lower is better)
Translates to: VNPQQHIFPNRSCRW*TSPDFCLQWWQMSV
Trigger: CACGGACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAACGATTAGGGAAAATATGCTGCTGTGGGTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 90 bp TGTCACAAGGGTTTTTCCTGCTCCTGGGAGAACCAGTCGAGTTGCTaGTCCTTGAGAATTAACAGAACCATGGAAATGGAGTTTGAAGAC +
Preference number: 1 (lower is better)
Translates to: CHKGFSCSWENQSSC*SLRINRTMEMEFED
Trigger: GTCTTCAAACTCCATTTCCATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCGACTGGTTCTCCCAGGAGCAGGAAAAACCCTTGTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 90 bp CTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTaGTTTCTGAGGCTTTTCATCCATTGGCAGCTTCACATCAGCTCC +
Preference number: 1 (lower is better)
Translates to: LKTTLVLSVALSPLS*FLRLFIHWQLHISS
Trigger: GGAGCTGATGTGAAGCTGCCAATGGATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 90 bp CATCAGAGGTGTCACTGGGCTGAAGACAACTCTTGTGTTGTCCGTTaGTTTGAGTCCTTTGAGTTGCTTTCTGAGGCTTTTCATCCATTG +
Preference number: 1 (lower is better)
Translates to: HQRCHWAEDNSCVVR*FESFELLSEAFHPL
Trigger: CAATGGATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCCAGTGACACCTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CCA 90 bp GAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTaGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAA +
Preference number: 1 (lower is better)
Translates to: EELPFQVRTVNTHVH*EYCVLQVSFLCEGQ
Trigger: TTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR GCA 90 bp TCATGTCACAAGGGTTTTTCCTGCTCCTGGGAGAACCAGTCGAGTTaGTGCTCCTTGAGAATTAACAGAACCATGGAAATGGAGTTTGAA +
Preference number: 1 (lower is better)
Translates to: SCHKGFSCSWENQSS*CSLRINRTMEMEFE
Trigger: TTCAAACTCCATTTCCATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCGACTGGTTCTCCCAGGAGCAGGAAAAACCCTTGTGACATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 90 bp TTTGGAGTCCTTTTGATGTGCTACTCTTTAGCCCTCAAAGGTGATTaGGAGGTGGTCACATTTCATGAACATCTAACAACGCTGGAGCCA +
Preference number: 1 (lower is better)
Translates to: FGVLLMCYSLALKGD*EVVTFHEHLTTLEP
Trigger: TGGCTCCAGCGTTGTTAGATGTTCATGAAATGTGACCACCTCTCAATCACCTTTGAGGGCTAAAGAGTAGCACATCAAAAGGACTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 90 bp AACAAAGAACTTTCAGTCTCATCAGATGTGCATTCTCTCTTTAGATaGAAATGTAGCATGGTTCCCGCAGGGCTCTCCATTTCTGCCCAG +
Preference number: 1 (lower is better)
Translates to: NKELSVSSDVHSLFR*KCSMVPAGLSISAQ
Trigger: CTGGGCAGAAATGGAGAGCCCTGCGGGAACCATGCTACATTTTCATCTAAAGAGAGAATGCACATCTGATGAGACTGAAAGTTCTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 90 bp CCTCCTCCTCCTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTaGGTTTGTATCAGCTTCTCTGTAAATGTTAAACAGCAAATTTGG +
Preference number: 1 (lower is better)
Translates to: PPPPRLPLHKEISIS*VCISFSVNVKQQIW
Trigger: CCAAATTTGCTGTTTAACATTTACAGAGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAGGAGGAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 90 bp CATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCTaGCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCA +
Preference number: 1 (lower is better)
Translates to: HVVFYCSNCALAIKA*LLHLCVWQQNGVSA
Trigger: TGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 90 bp CTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTaGTTCTTAGAGGAATTCCATTTTGAGCAACATATTCGTGATCAA +
Preference number: 1 (lower is better)
Translates to: LWGAHQLLPQVLASP*FLEEFHFEQHIRDQ
Trigger: TTGATCACGAATATGTTGCTCAAAATGGAATTCCTCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp CTCATCTACTGGAGTGTACACATTCTGGACATAGTAATACCTCACTaGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGG +
Preference number: 1 (lower is better)
Translates to: LIYWSVHILDIVIPH*LVNSVSIYWIIEWR
Trigger: CCGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATTACTATGTCCAGAATGTGTACACTCCAGTAGATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 90 bp CTGTTGTCAATCTTGGAACTGTCTGTATCTGATGTGAGATGTCTGTaGTGGATGACAACTGGATCAATTCAGAAGTCCAAGAGGTACCTA +
Preference number: 1 (lower is better)
Translates to: LLSILELSVSDVRCL*WMTTGSIQKSKRYL
Trigger: TAGGTACCTCTTGGACTTCTGAATTGATCCAGTTGTCATCCACCACAGACATCTCACATCAGATACAGACAGTTCCAAGATTGACAACAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CCA 90 bp TTGTCAATCTTGGAACTGTCTGTATCTGATGTGAGATGTCTGTGGTaGATGACAACTGGATCAATTCAGAAGTCCAAGAGGTACCTACAA +
Preference number: 1 (lower is better)
Translates to: LSILELSVSDVRCLW*MTTGSIQKSKRYLQ
Trigger: TTGTAGGTACCTCTTGGACTTCTGAATTGATCCAGTTGTCATCCACCACAGACATCTCACATCAGATACAGACAGTTCCAAGATTGACAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 90 bp TTCCAGACTGCACCATATAGATGTGGCCCTCTTATTTTGTGCACCTaGAAGTTCACTGTATTACTTCACGATTTGATCAGACTAATTCTC +
Preference number: 1 (lower is better)
Translates to: FQTAPYRCGPLILCT*KFTVLLHDLIRLIL
Trigger: GAGAATTAGTCTGATCAAATCGTGAAGTAATACAGTGAACTTGCAGGTGCACAAAATAAGAGGGCCACATCTATATGGTGCAGTCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CCA 90 bp TTTGAGATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTaGCAATTAAAGCCTGCCTCTTACATCTCTGTGTGTGGCAGCAAA +
Preference number: 1 (lower is better)
Translates to: FEIYTMLFSTAQTVL*QLKPASYISVCGSK
Trigger: TTTGCTGCCACACACAGAGATGTAAGAGGCAGGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 90 bp AAAAGTGAAACTTCACCGTTAGACTCCTCTTCATGTCAGGCAATTTaGGATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTG +
Preference number: 1 (lower is better)
Translates to: KSETSPLDSSSCQAI*DIHHVVFYCSNCAL
Trigger: CAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATCTCAAATTGCCTGACATGAAGAGGAGTCTAACGGTGAAGTTTCACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 90 bp ATTCTACAATCTAAAACAACAAAGAACTTTCAGTCTCATCAGATGTaGATTCTCTCTTTAGATGAAAATGTAGCATGGTTCCCGCAGGGC +
Preference number: 1 (lower is better)
Translates to: ILQSKTTKNFQSHQM*ILSLDENVAWFPQG
Trigger: GCCCTGCGGGAACCATGCTACATTTTCATCTAAAGAGAGAATGCACATCTGATGAGACTGAAAGTTCTTTGTTGTTTTAGATTGTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CCA 90 bp AAATTCTTTCTGAAGTACCAGGACAAATCTCTTAAGAGTTGGGTATaGGATTTTGGAGTCCTTTTGATGTGCTACTCTTTAGCCCTCAAA +
Preference number: 1 (lower is better)
Translates to: KFFLKYQDKSLKSWV*DFGVLLMCYSLALK
Trigger: TTTGAGGGCTAAAGAGTAGCACATCAAAAGGACTCCAAAATCCCATACCCAACTCTTAAGAGATTTGTCCTGGTACTTCAGAAAGAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGGACAACTGGGCCCGATaGTATGGGGCGCCCATCAAT +
Preference number: 2 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQDNWAR*YGAPIN
Trigger: ATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTC...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGCACCAGAATCGATCATaGCTCGGACGAACAGGGTGT +
Preference number: 2 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQHQNRS*LGRTGC
Trigger: ACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTG...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATGACAACTGGGCCCGATaGTATGGGGCGCCCATCAAT +
Preference number: 2 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDDNWAR*YGAPIN
Trigger: ATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTC...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTATTGGGATCATGTGTaGTCAGCCAGCGAACCCCTA +
Preference number: 2 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQYWDHV*SASEPL
Trigger: TAGGGGTTCGCTGGCTGAGCACACATGATCCCAATA...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTTCACCTGGAGAACTTaGGCTCCATTAGGTGCAATC +
Preference number: 2 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQFTWRT*APLGAI
Trigger: GATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAA...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATCGAACAGGGTGTGTCTaGCCGGAAGATGAATCTGGA +
Preference number: 2 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDRTGCV*PEDESG
Trigger: TCCAGATTCATCTTCCGGGCAGACACACCCTGTTCG...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGAATACACATGTCCACTaGGAATACTGTGTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQNTHVH*EYCVLQ
Trigger: CTGGAGCACACAGTATTCCCAGTGGACATGTGTATT...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATAATACACATGTCCACTaGGAATACTGTGTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDNTHVH*EYCVLQ
Trigger: CTGGAGCACACAGTATTCCCAGTGGACATGTGTATT...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTGGCGGCGGGTACTGTaGTACCGGAGGCTGGCGGTA +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGWRRVL*YRRLAV
Trigger: TACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTGGCGGTTGTGGTGCTaGTGGTGGGAGCGATGGTGG +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGWRLWC*WWERWW
Trigger: CCACCATCGCTCCCACCACCAGCACCACAACCGCCA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAGTTTCGTGGACAACTaGGCCCGATGCTATGGGGCG +
Preference number: 2 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKSFVDN*ARCYGA
Trigger: CGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACT...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACCAGGCGAATCCTACTaGGTAGGTCGGGTACGCGGC +
Preference number: 2 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQPGESY*VGRVRG
Trigger: GCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CCA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTTTGTGGTGCTGGTGGTaGGAGCGATGGTGGTATTGG +
Preference number: 2 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECLWCWW*ERWWYW
Trigger: CCAATACCACCATCGCTCCCACCACCAGCACCACAA...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGAACCAGGCGGTGATCTaGGTAGACGTGCTCATCTAC +
Preference number: 2 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRNQAVI*VDVLIY
Trigger: GTAGATGAGCACGTCTACCCAGATCACCGCCTGGTT...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGTCAACTATCAGGTCGTaGGTTTCGTGGACAACTGGG +
Preference number: 2 (lower is better)
Translates to: PGESYWVGRVRGICGVCLSTIRS*VSWTTG
Trigger: CCCAGTTGTCCACGAAACTCACGACCTGATAGTTGA...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGGGGAAGAATGGAGACTaGGTCACATCAAATGACAGC +
Preference number: 2 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSGKNGD*VTSNDS
Trigger: GCTGTCATTTGATGTGACTCAGTCTCCATTCTTCCC...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTTCAGGTTCGGACAGTaGATACACATGTCCACTGGG +
Preference number: 2 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRFRFGQ*IHMSTG
Trigger: CCCAGTGGACATGTGTATTCACTGTCCGAACCTGAA...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGGGGGCGCCCATCAATTaGTTCCACAAGTATTGGCCA +
Preference number: 2 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKGAPIN*FHKYWP
Trigger: TGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCC...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGCACCAGAATCGATCATaGCTCGGACGAACAGGGTGT +
Preference number: 2 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKHQNRS*LGRTGC
Trigger: ACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTG...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGGAGCGATGGTGGTATTaGAGAATACATCCGGCAGTG +
Preference number: 2 (lower is better)
Translates to: PGESYWVGRVRGICGVCLERWWY*RIHPAV
Trigger: CACTGCCGGATGTATTCTCCAATACCACCATCGCTC...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAGACAGCACCTCTCGGTaGTCTCCCAGGTCAACTATC +
Preference number: 2 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQDSTSR*SPRSTI
Trigger: GATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTC...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR TCA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTCTGAGTCACATCAAATaGCAGCACCTCTCGGTGATC +
Preference number: 2 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECLSHIK*QHLSVI
Trigger: GATCACCGAGAGGTGCTGTCATTTGATGTGACTCAG...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGCTGAGTCACATCAAATaGCAGCACCTCTCGGTGATC +
Preference number: 2 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWLSHIK*QHLSVI
Trigger: GATCACCGAGAGGTGCTGTCATTTGATGTGACTCAG...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGGGGAAGAATGGAGACTaGGTCACATCAAATGACAGC +
Preference number: 2 (lower is better)
Translates to: PGESYWVGRVRGICGVCLGKNGD*VTSNDS
Trigger: GCTGTCATTTGATGTGACTCAGTCTCCATTCTTCCC...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACATTCAGGTTCGGACAGTaGATACACATGTCCACTGGG +
Preference number: 2 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTFRFGQ*IHMSTG
Trigger: CCCAGTGGACATGTGTATTCACTGTCCGAACCTGAA...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACATATTGGGATCATGTGTaGTCAGCCAGCGAACCCCTA +
Preference number: 2 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTYWDHV*SASEPL
Trigger: TAGGGGTTCGCTGGCTGAGCACACATGATCCCAATA...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCACTGGGCCCGATGCTATaGGGCGCCCATCAATTGCTT +
Preference number: 2 (lower is better)
Translates to: GRMETESHQMTAPLGDLPLGPML*GAHQLL
Trigger: AAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGGACGTGCTCATCTACTaGAGTGTACACATTCTGGAC +
Preference number: 2 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRDVLIY*SVHILD
Trigger: GTCCAGAATGTGTACACTCCAGTAGATGAGCACGTC...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGGATGTGCCTCAGGTaGCCTGAAGATACAGTAGCC +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGRMCLR*PEDTVA
Trigger: GGCTACTGTATCTTCAGGCCACCTGAGGCACATCCT...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 90 bp AATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATaGGAGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: NRVAVVVLVVGAMVV*ENTSGSGSGSIQNQ
Trigger: TTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCTCCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGCATATTCGTGATCAATaGAGTTGCCAGAAGCACCAG +
Preference number: 2 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRHIRDQ*SCQKHQ
Trigger: CTGGTGCTTCTGGCAACTTCATTGATCACGAATATG...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGTGCCTCAGGTGGCCTaGAGATACAGTAGCCTAAAA +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGVPQVA*RYSSLK
Trigger: TTTTAGGCTACTGTATCTTCAGGCCACCTGAGGCAC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGCTGGGCCCGATGCTATaGGGCGCCCATCAATTGCTT +
Preference number: 2 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVLGPML*GAHQLL
Trigger: AAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CAA 90 bp GGTCGGGTACGCGGCATATGTGGGGTATGTTTGGTATCCAGGTATTaGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTC +
Preference number: 2 (lower is better)
Translates to: GRVRGICGVCLVSRY*RYEFSVRCQVCLVF
Trigger: GAAGACCAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCGCGTACCCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAGGGAAGAATGGAGACTaGGTCACATCAAATGACAGC +
Preference number: 2 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRGKNGD*VTSNDS
Trigger: GCTGTCATTTGATGTGACTCAGTCTCCATTCTTCCC...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATCGAGTGCTCCATGTaGTATTGGGATCATGTGTGC +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGIECSM*YWDHVC
Trigger: GCACACATGATCCCAATATCACATGGAGCACTCGAT...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGCCCTCAAAGGTGATTaGGAGGTGGTCACATTTCAT +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGALKGD*EVVTFH
Trigger: ATGAAATGTGACCACCTCTCAATCACCTTTGAGGGC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACAAAAATCTCGAAGAGCTaGCATTTCAGGTTCGGACAG +
Preference number: 2 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTKISKS*HFRFGQ
Trigger: CTGTCCGAACCTGAAATGGCAGCTCTTCGAGATTTT...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAGAATTCAGTGTACGTTaGCAGGTGTGCTTGGTCTTC +
Preference number: 2 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRREFSVR*QVCLVF
Trigger: GAAGACCAAGCACACCTGGCAACGTACACTGAATTC...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAGTTTCAGAGAGGATGTaGCTCAGGTGGCCTGAAGAT +
Preference number: 2 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQVSERM*LRWPED
Trigger: ATCTTCAGGCCACCTGAGGCACATCCTCTCTGAAAC...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCCAAAGCCGGAGTCATTaGGTACATGTGATTTGCACC +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGQSRSH*VHVICT
Trigger: GGTGCAAATCACATGTACCCAATGACTCCGGCTTTG...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 90 bp CAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATaGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGG +
Preference number: 2 (lower is better)
Translates to: QYSESKTIDRVLHVI*GSCVLSQRTPRTTG
Trigger: CCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CAA 90 bp GAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTaGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAG +
Preference number: 2 (lower is better)
Translates to: ESYWVGRVRGICGVC*VSRYLRYEFSVRCQ
Trigger: CTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CAA 90 bp CCAGGGGACATCAGAGGTGTCACTGGGCTGAAGACAACTCTTGTGTaGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCTGAGGCTTTTC +
Preference number: 2 (lower is better)
Translates to: PGDIRGVTGLKTTLV*SVALSPLSCFLRLF
Trigger: GAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCCAGTGACACCTCTGATGTCCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGTGTCTGCCCGGAAGATaGATCTGGAGCATCACTTGC +
Preference number: 2 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVCLPGR*IWSITC
Trigger: GCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACA...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCATCAACTATCAGGTCGTaGGTTTCGTGGACAACTGGG +
Preference number: 2 (lower is better)
Translates to: GRMETESHQMTAPLGDLPSTIRS*VSWTTG
Trigger: CCCAGTTGTCCACGAAACTCACGACCTGATAGTTGA...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGACAGCACCTCTCGGTaGTCTCCCAGGTCAACTATC +
Preference number: 2 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLDSTSR*SPRSTI
Trigger: GATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTC...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGGATAGGCGAGGATACTaGTTCTGGATAGTAAAATTG +
Preference number: 2 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRDRRGY*FWIVKL
Trigger: CAATTTTACTATCCAGAATCAGTATCCTCGCCTATC...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGCGAACAGGGTGTGTCTaGCCGGAAGATGAATCTGGA +
Preference number: 2 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVRTGCV*PEDESG
Trigger: TCCAGATTCATCTTCCGGGCAGACACACCCTGTTCG...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAGGACTGAAGATGAAATaGCCAGATGCATATGGAGGC +
Preference number: 2 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQGLKMK*PDAYGG
Trigger: GCCTCCATATGCATCTGGGCATTTCATCTTCAGTCC...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACAAAGCCGGAGTCATTaGGTACATGTGATTTGCACC +
Preference number: 2 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQQSRSH*VHVICT
Trigger: GGTGCAAATCACATGTACCCAATGACTCCGGCTTTG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGAATCGAGTGCTCCATGTaGTATTGGGATCATGTGTGC +
Preference number: 2 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGIECSM*YWDHVC
Trigger: GCACACATGATCCCAATATCACATGGAGCACTCGAT...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAGAAGCCTTTCCACACTaGACCGATAATTTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQEAFPH*TDNFGF
Trigger: GAAGCCAAAATTATCGGTGCAGTGTGGAAAGGCTTC...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGGAGTCCTTTTGATGTaGTACTCTTTAGCCCTCAAA +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGGVLLM*YSLALK
Trigger: TTTGAGGGCTAAAGAGTAGCACATCAAAAGGACTCC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTCTTGTGTTGTCCGTTaGTTTGAGTCCTTTGAGTTG +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGSCVVR*FESFEL
Trigger: CAACTCAAAGGACTCAAAGCAACGGACAACACAAGA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTCTGTATCCATCTACTaGATAATAGAGTGGCGGTTG +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGSVSIY*IIEWRL
Trigger: CAACCGCCACTCTATTATCCAGTAGATGGATACAGA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCAACCAGGCGGTGATCTaGGTAGACGTGCTCATCTAC +
Preference number: 2 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVNQAVI*VDVLIY
Trigger: GTAGATGAGCACGTCTACCCAGATCACCGCCTGGTT...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTTCCAAAACGTCAGCTaGTGCTTTTCCAGCCAATTA +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGFQNVS*CFSSQL
Trigger: TAATTGGCTGGAAAAGCACCAGCTGACGTTTTGGAA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 90 bp AGAGGTGTCACTGGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTaGAGTCCTTTGAGTTGCTTTCTGAGGCTTTTCATCCATTGGCAG +
Preference number: 2 (lower is better)
Translates to: RGVTGLKTTLVLSVA*SPLSCFLRLFIHWQ
Trigger: CTGCCAATGGATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCCAGTGACACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGACATATTCGTGATCAATaGAGTTGCCAGAAGCACCAG +
Preference number: 2 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGHIRDQ*SCQKHQ
Trigger: CTGGTGCTTCTGGCAACTTCATTGATCACGAATATG...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCCTGAGTCACATCAAATaGCAGCACCTCTCGGTGATC +
Preference number: 2 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVLSHIK*QHLSVI
Trigger: GATCACCGAGAGGTGCTGTCATTTGATGTGACTCAG...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGTGTGGATTCCAAGTaGTCATCACAGGTACATATA +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGSVDSK*SSQVHI
Trigger: TATATGTACCTGTGATGATCACTTGGAATCCACACT...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR TCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGTGCCTCAGGTGGCCTaGAGATACAGTAGCCTAAAA +
Preference number: 2 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFVPQVA*RYSSLK
Trigger: TTTTAGGCTACTGTATCTTCAGGCCACCTGAGGCAC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGATGCAAGAGTCCATCTaGGAGAGCACTTTCTTTTCA +
Preference number: 2 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQMQESI*ESTFFS
Trigger: TGAAAAGAAAGTGCTCTCTCAGATGGACTCTTGCAT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGTATTGGGATCATGTGTaGTCAGCCAGCGAACCCCTA +
Preference number: 2 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSYWDHV*SASEPL
Trigger: TAGGGGTTCGCTGGCTGAGCACACATGATCCCAATA...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGAACCAGTCGAGTTGCTaGTCCTTGAGAATTAACAGA +
Preference number: 2 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQNQSSC*SLRINR
Trigger: TCTGTTAATTCTCAAGGAGCAGCAACTCGACTGGTT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATAGTTTCGTGGACAACTaGGCCCGATGCTATGGGGCG +
Preference number: 2 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDSFVDN*ARCYGA
Trigger: CGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACT...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCCTGGCGGTACCAGTGTaGATTCCAAGTGATCATCAC +
Preference number: 2 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVLAVPV*IPSDHH
Trigger: GTGATGATCACTTGGAATCCACACTGGTACCGCCAG...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGACAGAACCATGGAAATaGAGTTTGAAGACGGTGAAG +
Preference number: 2 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQTEPWK*SLKTVK
Trigger: CTTCACCGTCTTCAAACTCCATTTCCATGGTTCTGT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 90 bp GCAGCGAGAGGATCACGGAAGCCTTTCCACACTGCACCGATAATTTaGGCTTCCTTAATAAGGCCTCAGTCCTCCAGTGATTTAAAAAGA +
Preference number: 2 (lower is better)
Translates to: AARGSRKPFHTAPII*ASLIRPQSSSDLKR
Trigger: TCTTTTTAAATCACTGGAGGACTGAGGCCTTATTAAGGAAGCCAAAATTATCGGTGCAGTGTGGAAAGGCTTCCGTGATCCTCTCGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 90 bp GCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTaGCTTTCTGAGGCTTTTCATCCATTGGCAGCTTCACATCAGCTC +
Preference number: 2 (lower is better)
Translates to: AEDNSCVVRCFESFE*LSEAFHPLAASHQL
Trigger: GAGCTGATGTGAAGCTGCCAATGGATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 90 bp ACTGGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTaGAGTTGCTTTCTGAGGCTTTTCATCCATTGGCAGCTTCACATC +
Preference number: 2 (lower is better)
Translates to: TGLKTTLVLSVALSP*SCFLRLFIHWQLHI
Trigger: GATGTGAAGCTGCCAATGGATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAAGTGTGGATTCCAAGTaGTCATCACAGGTACATATA +
Preference number: 2 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQSVDSK*SSQVHI
Trigger: TATATGTACCTGTGATGATCACTTGGAATCCACACT...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGCTCTCAGAAAATGTTaGAGGTCTTTTGGTGCTTTA +
Preference number: 2 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQALRKC*RSFGAL
Trigger: TAAAGCACCAAAAGACCTTCAACATTTTCTGAGAGC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCCATGAAAATTCTTTCTaGAGTACCAGGACAAATCTC +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGHENSF*STRTNL
Trigger: GAGATTTGTCCTGGTACTTCAGAAAGAATTTTCATG...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGGGGCGCCCATCAATTaGTTCCACAAGTATTGGCCA +
Preference number: 2 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTGAPIN*FHKYWP
Trigger: TGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR GCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGAATTCAGTGTACGTTaGCAGGTGTGCTTGGTCTTC +
Preference number: 2 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVEFSVR*QVCLVF
Trigger: GAAGACCAAGCACACCTGGCAACGTACACTGAATTC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR GCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGAAATCAGCATTTCCTaGGTTTGTATCAGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAEISIS*VCISFS
Trigger: AGAGAAGCTGATACAAACGCAGGAAATGCTGATTTC...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGAAATCAGCATTTCCTaGGTTTGTATCAGCTTCTCT +
Preference number: 2 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQEISIS*VCISFS
Trigger: AGAGAAGCTGATACAAACGCAGGAAATGCTGATTTC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATTTGTGGTGCTGGTGGTaGGAGCGATGGTGGTATTGG +
Preference number: 2 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDLWCWW*ERWWYW
Trigger: CCAATACCACCATCGCTCCCACCACCAGCACCACAA...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTTTCACCTGGAGAACTTaGGCTCCATTAGGTGCAATC +
Preference number: 2 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFFTWRT*APLGAI
Trigger: GATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAA...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGAATTAACAGAACCATaGAAATGGAGTTTGAAGACG +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGELTEP*KWSLKT
Trigger: CGTCTTCAAACTCCATTTCCATGGTTCTGTTAATTC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCCTGATCCTTTTGAAGTaGTTACCATCAAGTAATGTG +
Preference number: 2 (lower is better)
Translates to: PASYISVCGSKMESQQPGLILLK*LPSSNV
Trigger: CACATTACTTGATGGTAACCACTTCAAAAGGATCAG...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 90 bp ATTTCTGCCCAGGTCTTTCCAGCAGGTTGTTCTCTGTTGTCAATCTaGGAACTGTCTGTATCTGATGTGAGATGTCTGTGGTGGATGACA +
Preference number: 2 (lower is better)
Translates to: ISAQVFPAGCSLLSI*ELSVSDVRCLWWMT
Trigger: TGTCATCCACCACAGACATCTCACATCAGATACAGACAGTTCCAAGATTGACAACAGAGAACAACCTGCTGGAAAGACCTGGGCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTCATATTCGTGATCAATaGAGTTGCCAGAAGCACCAG +
Preference number: 2 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASHIRDQ*SCQKHQ
Trigger: CTGGTGCTTCTGGCAACTTCATTGATCACGAATATG...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR TCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGTCAACTATCAGGTCGTaGGTTTCGTGGACAACTGGG +
Preference number: 2 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVASTIRS*VSWTTG
Trigger: CCCAGTTGTCCACGAAACTCACGACCTGATAGTTGA...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR TCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCATCGAGTGCTCCATGTaGTATTGGGATCATGTGTGC +
Preference number: 2 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLIECSM*YWDHVC
Trigger: GCACACATGATCCCAATATCACATGGAGCACTCGAT...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGTCAAGGTGGAAAAATaGGAGATCATTTATTGGCAA +
Preference number: 2 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAVKVEK*EIIYWQ
Trigger: TTGCCAATAAATGATCTCTCATTTTTCCACCTTGAC...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCATGAAAATTCTTTCTaGAGTACCAGGACAAATCTC +
Preference number: 2 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQHENSF*STRTNL
Trigger: GAGATTTGTCCTGGTACTTCAGAAAGAATTTTCATG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATGGGGCGCCCATCAATTaGTTCCACAAGTATTGGCCA +
Preference number: 2 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDGAPIN*FHKYWP
Trigger: TGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCC...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp CGGCATATGTGGGGTATGTTTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTGACGTGCTCATCTACTaGAGTGTACACATTCTGGAC +
Preference number: 2 (lower is better)
Translates to: RHMWGMFGIQVFEVRIQCDVLIY*SVHILD
Trigger: GTCCAGAATGTGTACACTCCAGTAGATGAGCACGTC...ACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAGATAGTAAAATTGTTTaGAGCTCGGCAATCATAAGA +
Preference number: 2 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRDSKIV*SSAIIR
Trigger: TCTTATGATTGCCGAGCTCCAAACAATTTTACTATC...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGGTACGCGGCATATGTaGGGTATGTTTGGTATCCAG +
Preference number: 2 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTGTRHM*GMFGIQ
Trigger: CTGGATACCAAACATACCCCACATATGCCGCGTACC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR CAA 90 bp ATTCTGGATAGTAAAATTGTTTGGAGCTCGGCAATCATAAGAAACTaGCAGTTTCCACCCCCTCTTCACCTGGAGAACTTGGGCTCCATT +
Preference number: 2 (lower is better)
Translates to: ILDSKIVWSSAIIRN*QFPPPLHLENLGSI
Trigger: AATGGAGCCCAAGTTCTCCAGGTGAAGAGGGGGTGGAAACTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CAA 90 bp TTTAATGCTTTGTGGAAGCCATCATGGCATGATGATGGTAAGGTGTaGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCATG +
Preference number: 2 (lower is better)
Translates to: FNALWKPSWHDDGKV*CQSRSHWVHVICTM
Trigger: CATGGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATCATCATGCCATGATGGCTTCCACAAAGCATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp CTGATTCTGGATAGTAAAATTGTTTGGAGCTCGGCAATCATAAGAAACTTGCAGTGTCTGCCCGGAAGATaGATCTGGAGCATCACTTGC +
Preference number: 2 (lower is better)
Translates to: LILDSKIVWSSAIIRNLQCLPGR*IWSITC
Trigger: GCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACA...CTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGGAGTCCTTTTGATGTaGTACTCTTTAGCCCTCAAA +
Preference number: 2 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVGVLLM*YSLALK
Trigger: TTTGAGGGCTAAAGAGTAGCACATCAAAAGGACTCC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp CTGATTCTGGATAGTAAAATTGTTTGGAGCTCGGCAATCATAAGAAACTTGCAGCACCAGAATCGATCATaGCTCGGACGAACAGGGTGT +
Preference number: 2 (lower is better)
Translates to: LILDSKIVWSSAIIRNLQHQNRS*LGRTGC
Trigger: ACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTG...CTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATGAGCGATGGTGGTATTaGAGAATACATCCGGCAGTG +
Preference number: 2 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDERWWY*RIHPAV
Trigger: CACTGCCGGATGTATTCTCCAATACCACCATCGCTC...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCATGTTGAAGGTCTTTTaGTGCTTTAGGATGTGTGCC +
Preference number: 2 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVMLKVF*CFRMCA
Trigger: GGCACACATCCTAAAGCACCAAAAGACCTTCAACAT...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGATAGGCGAGGATACTaGTTCTGGATAGTAAAATTG +
Preference number: 2 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFDRRGY*FWIVKL
Trigger: CAATTTTACTATCCAGAATCAGTATCCTCGCCTATC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR TCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTGGTATCCAGGTATTTaGGGTACGAATTCAGTGTAC +
Preference number: 2 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFWYPGI*GTNSVY
Trigger: GTACACTGAATTCGTACCTCAAATACCTGGATACCA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR TCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCGTGCCTCAGGTGGCCTaGAGATACAGTAGCCTAAAA +
Preference number: 2 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAVPQVA*RYSSLK
Trigger: TTTTAGGCTACTGTATCTTCAGGCCACCTGAGGCAC...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGCTCTCAGAAAATGTTaGAGGTCTTTTGGTGCTTTA +
Preference number: 2 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVALRKC*RSFGAL
Trigger: TAAAGCACCAAAAGACCTTCAACATTTTCTGAGAGC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCGAGTTGCTGCTCCTTaGGAATTAACAGAACCATGG +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSRVAAP*ELTEPW
Trigger: CCATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATATCTGGAGCATCACTTaGAAGTGTGGAGATGAGGCA +
Preference number: 2 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDIWSIT*KCGDEA
Trigger: TGCCTCATCTCCACACTTGCAAGTGATGCTCCAGAT...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp AGGAATTCCATTTTGAGCAACATATTCGTGATCAATGAAGTTGCCAGAAGCACCATCTGGAGCATCACTTaGAAGTGTGGAGATGAGGCA +
Preference number: 2 (lower is better)
Translates to: RNSILSNIFVINEVARSTIWSIT*KCGDEA
Trigger: TGCCTCATCTCCACACTTGCAAGTGATGCTCCAGAT...GGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTACTGGGAATACTGTGTaGTCCAGGTATCATTTCTAT +
Preference number: 2 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASTGNTV*SRYHFY
Trigger: ATAGAAATGATACCTGGAGCACACAGTATTCCCAGT...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR GCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTTGAAGGTCTTTTGGTaGTTTAGGATGTGTGCCAGT +
Preference number: 2 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLLKVFW*FRMCAS
Trigger: ACTGGCACACATCCTAAAGCACCAAAAGACCTTCAA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTTGGGTATGGGATTTTaGAGTCCTTTTGATGTGCTA +
Preference number: 2 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVLGMGF*SPFDVL
Trigger: TAGCACATCAAAAGGACTCCAAAATCCCATACCCAA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 90 bp ATCTACTGGAGTGTACACATTCTGGACATAGTAATACCTCACTGGTaGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTG +
Preference number: 2 (lower is better)
Translates to: IYWSVHILDIVIPHW*VNSVSIYWIIEWRL
Trigger: CAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATTACTATGTCCAGAATGTGTACACTCCAGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CAA 90 bp TCTCCCACTGGGGTTTTTATCCATGTCCAATTCGCTCTAAATAAGTaGGTCTCCCTGCAGTTCCCTCCGAGTTTATTTGAAATCTTTAAG +
Preference number: 2 (lower is better)
Translates to: SPTGVFIHVQFALNK*VSLQFPPSLFEIFK
Trigger: CTTAAAGATTTCAAATAAACTCGGAGGGAACTGCAGGGAGACCAACTTATTTAGAGCGAATTGGACATGGATAAAAACCCCAGTGGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTTTAGCCCTCAAAGGTaGTTGAGAGGTGGTCACATT +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSFSPQR*LRGGHI
Trigger: AATGTGACCACCTCTCAATCACCTTTGAGGGCTAAA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp CTGATTCTGGATAGTAAAATTGTTTGGAGCTCGGCAATCATAAGAAACTTGCAGATCTGGAGCATCACTTaGAAGTGTGGAGATGAGGCA +
Preference number: 2 (lower is better)
Translates to: LILDSKIVWSSAIIRNLQIWSIT*KCGDEA
Trigger: TGCCTCATCTCCACACTTGCAAGTGATGCTCCAGAT...CTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTGGCAAATACTCTGTTaGTCTCAGAAAATGTTGAAG +
Preference number: 2 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVWQILC*SQKMLK
Trigger: CTTCAACATTTTCTGAGAGCAACAGAGTATTTGCCA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAAGGATGTGCCTCAGGTaGCCTGAAGATACAGTAGCC +
Preference number: 2 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLRMCLR*PEDTVA
Trigger: GGCTACTGTATCTTCAGGCCACCTGAGGCACATCCT...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAGGTTTTTCCTGCTCCTaGGAGAACCAGTCGAGTTGC +
Preference number: 2 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLGFSCS*ENQSSC
Trigger: GCAACTCGACTGGTTCTCCCAGGAGCAGGAAAAACC...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTTGTGGAAGCCATCATaGCATGATGATGGTAAGGTG +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSLWKPS*HDDGKV
Trigger: CACCTTACCATCATCATGCCATGATGGCTTCCACAA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 90 bp ACAAGCTTTAGTAAACAGCCAAATGTGGATCAGGGACTTTCTGAGTaGTTAACCCACAGCAGCATATTTTCCCTAATCGTTCTTGTCGTT +
Preference number: 2 (lower is better)
Translates to: TSFSKQPNVDQGLSE*LTHSSIFSLIVLVV
Trigger: AACGACAAGAACGATTAGGGAAAATATGCTGCTGTGGGTTAACAACTCAGAAAGTCCCTGATCCACATTTGGCTGTTTACTAAAGCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGTCAAGGTGGAAAAATaGGAGATCATTTATTGGCAA +
Preference number: 2 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLVKVEK*EIIYWQ
Trigger: TTGCCAATAAATGATCTCTCATTTTTCCACCTTGAC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAGCCTCAGTCCTCCAGTaGTTTAAAAAGAGGGTACCG +
Preference number: 2 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLASVLQ*FKKRVP
Trigger: CGGTACCCTCTTTTTAAATCACTGGAGGACTGAGGC...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp CTGATTCTGGATAGTAAAATTGTTTGGAGCTCGGCAATCATAAGAAACTTGCAGAAAATCTCGAAGAGCTaGCATTTCAGGTTCGGACAG +
Preference number: 2 (lower is better)
Translates to: LILDSKIVWSSAIIRNLQKISKS*HFRFGQ
Trigger: CTGTCCGAACCTGAAATGGCAGCTCTTCGAGATTTT...CTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTTGAAGGTCTTTTGGTaGTTTAGGATGTGTGCCAGT +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSLKVFW*FRMCAS
Trigger: ACTGGCACACATCCTAAAGCACCAAAAGACCTTCAA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTGGCAAATACTCTGTTaGTCTCAGAAAATGTTGAAG +
Preference number: 2 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLWQILC*SQKMLK
Trigger: CTTCAACATTTTCTGAGAGCAACAGAGTATTTGCCA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTAACCAGTCGAGTTGCTaGTCCTTGAGAATTAACAGA +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSNQSSC*SLRINR
Trigger: TCTGTTAATTCTCAAGGAGCAGCAACTCGACTGGTT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTCTTGTGTTGTCCGTTaGTTTGAGTCCTTTGAGTTG +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSSCVVR*FESFEL
Trigger: CAACTCAAAGGACTCAAAGCAACGGACAACACAAGA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTATGTTGAAGGTCTTTTaGTGCTTTAGGATGTGTGCC +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSMLKVF*CFRMCA
Trigger: GGCACACATCCTAAAGCACCAAAAGACCTTCAACAT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTACTTCCAGGACTGGCTaGAAAGTAAACTTATTAATT +
Preference number: 2 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASTSRTG*KVNLLI
Trigger: AATTAATAAGTTTACTTTCCAGCCAGTCCTGGAAGT...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTACCATCAAGTAATGTaGAGCTCACTAAGGAAGTCC +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSYHQVM*SSLRKS
Trigger: GGACTTCCTTAGTGAGCTCCACATTACTTGATGGTA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATGTGTGGCAGCAAAATaGAGTCTCAGCAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLCVAAK*SLSNQA
Trigger: TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGCTCTCAGAAAATGTTaGAGGTCTTTTGGTGCTTTA +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSALRKC*RSFGAL
Trigger: TAAAGCACCAAAAGACCTTCAACATTTTCTGAGAGC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGACATAGTCTTAACATaGAAGAGTCCATCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSDIVLT*KSPSER
Trigger: TCTCTCAGATGGACTCTTGCATGTTAAGACTATGTC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCATGTTGTTTTCTACTaGTCAAACTGTGCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSHVVFY*SNCALA
Trigger: TGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTATAGTAATACCTCACTaGTTGGTAAACTCTGTATCC +
Preference number: 2 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTIVIPH*LVNSVS
Trigger: GGATACAGAGTTTACCAACCAGTGAGGTATTACTAT...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCCCAGACTTCCAGGACTaGCTGGAAAGTAAACTTATT +
Preference number: 2 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAPDFQD*LESKLI
Trigger: AATAAGTTTACTTTCCAGCCAGTCCTGGAAGTCTGG...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATATAGTAATACCTCACTaGTTGGTAAACTCTGTATCC +
Preference number: 2 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDIVIPH*LVNSVS
Trigger: GGATACAGAGTTTACCAACCAGTGAGGTATTACTAT...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTATAGTAATACCTCACTaGTTGGTAAACTCTGTATCC +
Preference number: 2 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSIVIPH*LVNSVS
Trigger: GGATACAGAGTTTACCAACCAGTGAGGTATTACTAT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR TCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAGATGCTGATGAAAAGTaGAACTTCACCGTTAGACTC +
Preference number: 2 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLDADEK*NFTVRL
Trigger: GAGTCTAACGGTGAAGTTTCACTTTTCATCAGCATC...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATTGAGTCCTTTGAGTTaGTTTCTGAGGCTTTTCATC +
Preference number: 2 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLLSPLS*FLRLFI
Trigger: GATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR GCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTACATGTTGTTTTCTACTaGTCAAACTGTGCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLHVVFY*SNCALA
Trigger: TGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATG...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCACTTCCAGGACTGGCTaGAAAGTAAACTTATTAATT +
Preference number: 2 (lower is better)
Translates to: DIHHVVFYCSNCALAIKATSRTG*KVNLLI
Trigger: AATTAATAAGTTTACTTTCCAGCCAGTCCTGGAAGT...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAGATAGTAAAATTGTTTaGAGCTCGGCAATCATAAGA +
Preference number: 2 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLDSKIV*SSAIIR
Trigger: TCTTATGATTGCCGAGCTCCAAACAATTTTACTATC...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR CCA 72 bp TATTTACAGGGTACTGTAAGATGGAGGCGGCGGCGGTaGTGGTGGTGGAGGCGGCGGCTGTGGCGGCGGGTA +
Preference number: 3 (lower is better)
Translates to: YLQGTVRWRRRR*WWWRRRLWRRV
Trigger: TACCCGCCGCCACAGCCGCCGCCTCCACCACCACCACCGCCGCCGCCTCCATCTTACAGTACCCTGTAAATA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp GGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTaGCGGTACCAGTGTGGATTCCAAGTGATCATCACA +
Preference number: 3 (lower is better)
Translates to: GGCGGGYCGTGG*RYQCGFQVIIT
Trigger: TGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTTCTGGATAGTAAAATaGTTTGGAGCTCGGCAATCA +
Preference number: 3 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQFWIVK*FGARQS
Trigger: TGATTGCCGAGCTCCAAACAATTTTACTATCCAGAA...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp TCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTaGGTAGGTCGGGTACGCGGCATATGTGGGGTATGT +
Preference number: 3 (lower is better)
Translates to: SVSSHWVPGESY*VGRVRGICGVC
Trigger: ACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATAGTATTGGCCAGTCCTaGATTCTTAGAGGAATTCCA +
Preference number: 3 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDSIGQS*ILRGIP
Trigger: TGGAATTCCTCTAAGAATCAAGGACTGGCCAATACT...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGTGGGGCGCCCATCAATaGCTTCCACAAGTATTGGCC +
Preference number: 3 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSWGAHQ*LPQVLA
Trigger: GGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCA...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTTCTGGATAGTAAAATaGTTTGGAGCTCGGCAATCA +
Preference number: 3 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDFWIVK*FGARQS
Trigger: TGATTGCCGAGCTCCAAACAATTTTACTATCCAGAA...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp GGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATaGGGCGCCCATCAATTGCTTCCACAAGTATTGGCC +
Preference number: 3 (lower is better)
Translates to: GREFRGQLGPML*GAHQLLPQVLA
Trigger: GGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp ATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATaGTGGTATTGGAGAATACATCCGGCAGTGGTAGCG +
Preference number: 3 (lower is better)
Translates to: IEWRLWCWWWER*WYWRIHPAVVA
Trigger: CGCTACCACTGCCGGATGTATTCTCCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGCTTCACCTGGAGAACTaGGGCTCCATTAGGTGCAAT +
Preference number: 3 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSLHLEN*GSIRCN
Trigger: ATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAAG...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp CAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTaGGCCCGATGCTATGGGGCGCCCATCAATTGCTTC +
Preference number: 3 (lower is better)
Translates to: QVNYQVVSFVDN*ARCYGAPINCF
Trigger: GAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR TCA 72 bp ATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATaGATCTGGAGCATCACTTGCAAGTGTGGAGATGAG +
Preference number: 3 (lower is better)
Translates to: MARTNRVCLPGR*IWSITCKCGDE
Trigger: CTCATCTCCACACTTGCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR GCA 72 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATaGCAGGGCTACAGACAACGGCCCATTTCTAGGCAC +
Preference number: 3 (lower is better)
Translates to: FCLQWWQMSVCT*QGYRQRPISRH
Trigger: GTGCCTAGAAATGGGCCGTTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAGGAGCGATGGTGGTATaGGAGAATACATCCGGCAGT +
Preference number: 3 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRGAMVV*ENTSGS
Trigger: ACTGCCGGATGTATTCTCCAATACCACCATCGCTCC...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR GCA 72 bp CAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTaGCCGGAAGATGAATCTGGAGCATCACTTGCAAGT +
Preference number: 3 (lower is better)
Translates to: QNRSWLGRTGCV*PEDESGASLAS
Trigger: ACTTGCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR GCA 72 bp TATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATaGTATGGGGCGCCCATCAATTGCTTCCACAAGTAT +
Preference number: 3 (lower is better)
Translates to: YQVVSFVDNWAR*YGAPINCFHKY
Trigger: ATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGGCAATCATAAGAAACTaGCAGTTTCCACCCCCTCTT +
Preference number: 3 (lower is better)
Translates to: PGESYWVGRVRGICGVCLAIIRN*QFPPPL
Trigger: AAGAGGGGGTGGAAACTGCAAGTTTCTTATGATTGC...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTCAAAGCCGGAGTCATaGGGTACATGTGATTTGCAC +
Preference number: 3 (lower is better)
Translates to: PASYISVCGSKMESQQPGSKPES*GTCDLH
Trigger: GTGCAAATCACATGTACCCAATGACTCCGGCTTTGA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 72 bp GGGTGCAGCGAGAGGATCACGGAAGCCTTTCCACACTaGACCGATAATTTTGGCTTCCTTAATAAGGCCTCA +
Preference number: 3 (lower is better)
Translates to: GCSERITEAFPH*TDNFGFLNKAS
Trigger: TGAGGCCTTATTAAGGAAGCCAAAATTATCGGTGCAGTGTGGAAAGGCTTCCGTGATCCTCTCGCTGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 72 bp GTTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTaGAGTGGTGGCAAATGTCCGTGTGCACATGCCAGG +
Preference number: 3 (lower is better)
Translates to: VLVVGELLQTFA*SGGKCPCAHAR
Trigger: CCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CCA 72 bp TTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTaGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGG +
Preference number: 3 (lower is better)
Translates to: LVNSVSIYWIIE*RLWCWWWERWW
Trigger: CCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp CGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTaGGGTATGTTTGGTATCCAGGTATTTGAGGTACGA +
Preference number: 3 (lower is better)
Translates to: RILLGRSGTRHM*GMFGIQVFEVR
Trigger: TCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACAATATGTGGGGTATGTTaGGTATCCAGGTATTTGAGG +
Preference number: 3 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTICGVC*VSRYLR
Trigger: CCTCAAATACCTGGATACCAAACATACCCCACATAT...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTCAAAGCCGGAGTCATaGGGTACATGTGATTTGCAC +
Preference number: 3 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQSKPES*GTCDLH
Trigger: GTGCAAATCACATGTACCCAATGACTCCGGCTTTGA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGTGTTGTCCGTTGCTTaGAGTCCTTTGAGTTGCTTT +
Preference number: 3 (lower is better)
Translates to: PASYISVCGSKMESQQPGVLSVA*SPLSCF
Trigger: AAAGCAACTCAAAGGACTCAAAGCAACGGACAACAC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 72 bp GTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTaGTCATCACAGGTACATATAGTGATCTTCCTTGTC +
Preference number: 3 (lower is better)
Translates to: VPEAGGTSVDSK*SSQVHIVIFLV
Trigger: GACAAGGAAGATCACTATATGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp TCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTaGTGGTGGGAGCGATGGTGGTATTGGAGAATACAT +
Preference number: 3 (lower is better)
Translates to: SIYWIIEWRLWC*WWERWWYWRIH
Trigger: ATGTATTCTCCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp ACTTGCAGTTTCCACCCCCTCTTCACCTGGAGAACTTaGGCTCCATTAGGTGCAATCGTTGGAGTAATTAGC +
Preference number: 3 (lower is better)
Translates to: TCSFHPLFTWRT*APLGAIVGVIS
Trigger: GCTAATTACTCCAACGATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAAGAGGGGGTGGAAACTGCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGCAATCATAAGAAACTaGCAGTTTCCACCCCCTCTT +
Preference number: 3 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAAIIRN*QFPPPL
Trigger: AAGAGGGGGTGGAAACTGCAAGTTTCTTATGATTGC...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CAA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACATTCTGGATAGTAAAATaGTTTGGAGCTCGGCAATCA +
Preference number: 3 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTFWIVK*FGARQS
Trigger: TGATTGCCGAGCTCCAAACAATTTTACTATCCAGAA...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGACCAGGTTTAATGCTTaGTGGAAGCCATCATGGCAT +
Preference number: 3 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQTRFNA*WKPSWH
Trigger: ATGCCATGATGGCTTCCACAAAGCATTAAACCTGGT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 72 bp GCGGCATATGTGGGGTATGTTTGGTATCCAGGTATTTaGGGTACGAATTCAGTGTACGTTGCCAGGTGTGCT +
Preference number: 3 (lower is better)
Translates to: AAYVGYVWYPGI*GTNSVYVARCA
Trigger: AGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR TCA 72 bp CCTGCTCCTGGGAGAACCAGTCGAGTTGCTGCTCCTTaGGAATTAACAGAACCATGGAAATGGAGTTTGAAG +
Preference number: 3 (lower is better)
Translates to: PAPGRTSRVAAP*ELTEPWKWSLK
Trigger: CTTCAAACTCCATTTCCATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCGACTGGTTCTCCCAGGAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 72 bp GGTTTTTCCTGCTCCTGGGAGAACCAGTCGAGTTGCTaGTCCTTGAGAATTAACAGAACCATGGAAATGGAG +
Preference number: 3 (lower is better)
Translates to: GFSCSWENQSSC*SLRINRTMEME
Trigger: CTCCATTTCCATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCGACTGGTTCTCCCAGGAGCAGGAAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CCA 72 bp ATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTaGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: IPHWLVNSVSIY*IIEWRLWCWWW
Trigger: CCACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp AACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTaGAGTGTACACATTCTGGACATAGTAATACCTCAC +
Preference number: 3 (lower is better)
Translates to: NQAVIWVDVLIY*SVHILDIVIPH
Trigger: GTGAGGTATTACTATGTCCAGAATGTGTACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp CAGATGTGCATTCTCTCTTTAGATGAAAATGTAGCATaGTTCCCGCAGGGCTCTCCATTTCTGCCCAGGTCT +
Preference number: 3 (lower is better)
Translates to: QMCILSLDENVA*FPQGSPFLPRS
Trigger: AGACCTGGGCAGAAATGGAGAGCCCTGCGGGAACCATGCTACATTTTCATCTAAAGAGAGAATGCACATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCAGCATTTCCTGCGTTaGTATCAGCTTCTCTGTAAA +
Preference number: 3 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQQHFLR*YQLLCK
Trigger: TTTACAGAGAAGCTGATACAAACGCAGGAAATGCTG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCCATGGAAATGGAGTTaGAAGACGGTGAAGTTTCTA +
Preference number: 3 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQPWKWS*KTVKFL
Trigger: TAGAAACTTCACCGTCTTCAAACTCCATTTCCATGG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGTGCTCCATGTGATATaGGGATCATGTGTGCTCAGC +
Preference number: 3 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLVLHVI*GSCVLS
Trigger: GCTGAGCACACATGATCCCAATATCACATGGAGCAC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CAA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATTGGTATCCAGGTATTaGAGGTACGAATTCAGTGTA +
Preference number: 3 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQALVSRY*RYEFSV
Trigger: TACACTGAATTCGTACCTCAAATACCTGGATACCAA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CAA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTTGGCAAATACTCTGTaGCTCTCAGAAAATGTTGAA +
Preference number: 3 (lower is better)
Translates to: PASYISVCGSKMESQQPGLANTL*LSENVE
Trigger: TTCAACATTTTCTGAGAGCAACAGAGTATTTGCCAA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCATGGTGATGGAGGTTTaGGCAGGTAAAACCCAGACT +
Preference number: 3 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVMVMEV*AGKTQT
Trigger: AGTCTGGGTTTTACCTGCCAAAACCTCCATCACCAT...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 72 bp AAAATCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTaGATACACATGTCCACTGGGAATACTGTGTGCTCC +
Preference number: 3 (lower is better)
Translates to: KISKSCHFRFGQ*IHMSTGNTVCS
Trigger: GGAGCACACAGTATTCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR GCA 72 bp AAGGGTTTTTCCTGCTCCTGGGAGAACCAGTCGAGTTaGTGCTCCTTGAGAATTAACAGAACCATGGAAATG +
Preference number: 3 (lower is better)
Translates to: KGFSCSWENQSS*CSLRINRTMEM
Trigger: CATTTCCATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCGACTGGTTCTCCCAGGAGCAGGAAAAACCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CCA 72 bp TATCATTTCTATGTGAGGGTCAACCAGGCGGTGATCTaGGTAGACGTGCTCATCTACTGGAGTGTACACATT +
Preference number: 3 (lower is better)
Translates to: YHFYVRVNQAVI*VDVLIYWSVHI
Trigger: AATGTGTACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACATAGAAATGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp CTGGTTACCAGGTTTAATGCTTTGTGGAAGCCATCATaGCATGATGATGGTAAGGTGTTGTGTCAAAGCCGG +
Preference number: 3 (lower is better)
Translates to: LVTRFNALWKPS*HDDGKVLCQSR
Trigger: CCGGCTTTGACACAACACCTTACCATCATCATGCCATGATGGCTTCCACAAAGCATTAAACCTGGTAACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGCAATCATAAGAAACTaGCAGTTTCCACCCCCTCTT +
Preference number: 3 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFAIIRN*QFPPPL
Trigger: AAGAGGGGGTGGAAACTGCAAGTTTCTTATGATTGC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR TCA 72 bp CAGCAGCATATTTTCCCTAATCGTTCTTGTCGTTGGTaGACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: QQHIFPNRSCRW*TSPDFCLQWWQ
Trigger: TTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAACGATTAGGGAAAATATGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 72 bp ACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTaGTTTCTGAGGCTTTTCATCCATTGGCAGCTTCAC +
Preference number: 3 (lower is better)
Translates to: TLVLSVALSPLS*FLRLFIHWQLH
Trigger: GTGAAGCTGCCAATGGATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 72 bp TGTCACTGGGCTGAAGACAACTCTTGTGTTGTCCGTTaGTTTGAGTCCTTTGAGTTGCTTTCTGAGGCTTTT +
Preference number: 3 (lower is better)
Translates to: CHWAEDNSCVVR*FESFELLSEAF
Trigger: AAAAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCCAGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CCA 72 bp CCATTTCAGGTTCGGACAGTGAATACACATGTCCACTaGGAATACTGTGTGCTCCAGGTATCATTTCTATGT +
Preference number: 3 (lower is better)
Translates to: PFQVRTVNTHVH*EYCVLQVSFLC
Trigger: ACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CCA 72 bp TTGGAACTGTCTGTATCTGATGTGAGATGTCTGTGGTaGATGACAACTGGATCAATTCAGAAGTCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: LELSVSDVRCLW*MTTGSIQKSKR
Trigger: CCTCTTGGACTTCTGAATTGATCCAGTTGTCATCCACCACAGACATCTCACATCAGATACAGACAGTTCCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCAGTATTGGCCAGTCCTaGATTCTTAGAGGAATTCCA +
Preference number: 3 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLSIGQS*ILRGIP
Trigger: TGGAATTCCTCTAAGAATCAAGGACTGGCCAATACT...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CAA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATGGGGCGCCCATCAATaGCTTCCACAAGTATTGGCC +
Preference number: 3 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLWGAHQ*LPQVLA
Trigger: GGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGATGATGGTAAGGTGTaGTGTCAAAGCCGGAGTCAT +
Preference number: 3 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSDDGKV*CQSRSH
Trigger: ATGACTCCGGCTTTGACACAACACCTTACCATCATC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTGCTCAAACTGTGCTTaGGCAATTAAAGCCTGCCTC +
Preference number: 3 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSCSNCA*AIKACL
Trigger: GAGGCAGGCTTTAATTGCCAAAGCACAGTTTGAGCA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 72 bp CCTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTaGGTTTGTATCAGCTTCTCTGTAAATGTTAAACAG +
Preference number: 3 (lower is better)
Translates to: PRLPLHKEISIS*VCISFSVNVKQ
Trigger: CTGTTTAACATTTACAGAGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CCA 72 bp TCAGCTCCATCCTCTAGAGGGACCTTTTTCATTACGTaGATTCTGATCCTTTTGAAGTGGTTACCATCAAGT +
Preference number: 3 (lower is better)
Translates to: SAPSSRGTFFIT*ILILLKWLPSS
Trigger: ACTTGATGGTAACCACTTCAAAAGGATCAGAATCCACGTAATGAAAAAGGTCCCTCTAGAGGATGGAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGTAATACCTCACTGGTaGGTAAACTCTGTATCCATC +
Preference number: 3 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTVIPHW*VNSVSI
Trigger: GATGGATACAGAGTTTACCAACCAGTGAGGTATTAC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR-3UTR CAA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTATGAGAGATCATTTATaGGCAAATACTCTGTTGCTC +
Preference number: 3 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASMRDHL*ANTLLL
Trigger: GAGCAACAGAGTATTTGCCAATAAATGATCTCTCAT...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTCGAGTTGCTGCTCCTaGAGAATTAACAGAACCATG +
Preference number: 3 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSSSCCS*RINRTM
Trigger: CATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCGA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 72 bp CTTTTGATGTGCTACTCTTTAGCCCTCAAAGGTGATTaGGAGGTGGTCACATTTCATGAACATCTAACAACG +
Preference number: 3 (lower is better)
Translates to: LLMCYSLALKGD*EVVTFHEHLTT
Trigger: CGTTGTTAGATGTTCATGAAATGTGACCACCTCTCAATCACCTTTGAGGGCTAAAGAGTAGCACATCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR GCA 72 bp GCACCATATAGATGTGGCCCTCTTATTTTGTGCACCTaGAAGTTCACTGTATTACTTCACGATTTGATCAGA +
Preference number: 3 (lower is better)
Translates to: APYRCGPLILCT*KFTVLLHDLIR
Trigger: TCTGATCAAATCGTGAAGTAATACAGTGAACTTGCAGGTGCACAAAATAAGAGGGCCACATCTATATGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTTGGCAAATACTCTGTaGCTCTCAGAAAATGTTGAA +
Preference number: 3 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLLANTL*LSENVE
Trigger: TTCAACATTTTCTGAGAGCAACAGAGTATTTGCCAA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 72 bp TTTATTGGCAAATACTCTGTTGCTCTCAGAAAATGTTaGAGGTCTTTTGGTGCTTTAGGATGTGTGCCAGTC +
Preference number: 3 (lower is better)
Translates to: FIGKYSVALRKC*RSFGALGCVPV
Trigger: GACTGGCACACATCCTAAAGCACCAAAAGACCTTCAACATTTTCTGAGAGCAACAGAGTATTTGCCAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR TCA 72 bp ACTTCACCGTTAGACTCCTCTTCATGTCAGGCAATTTaGGATATACACCATGTTGTTTTCTACTGCTCAAAC +
Preference number: 3 (lower is better)
Translates to: TSPLDSSSCQAI*DIHHVVFYCSN
Trigger: GTTTGAGCAGTAGAAAACAACATGGTGTATATCTCAAATTGCCTGACATGAAGAGGAGTCTAACGGTGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTATGAGAGATCATTTATaGGCAAATACTCTGTTGCTC +
Preference number: 3 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSMRDHL*ANTLLL
Trigger: GAGCAACAGAGTATTTGCCAATAAATGATCTCTCAT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTTCATGTCAGGCAATTaGAGATATACACCATGTTGT +
Preference number: 3 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSFMSGN*RYTPCC
Trigger: ACAACATGGTGTATATCTCAAATTGCCTGACATGAA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CCA 72 bp TGGAGTGTACACATTCTGGACATAGTAATACCTCACTaGTTGGTAAACTCTGTATCCATCTACTGGATAATA +
Preference number: 3 (lower is better)
Translates to: WSVHILDIVIPH*LVNSVSIYWII
Trigger: TATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATTACTATGTCCAGAATGTGTACACTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR-3UTR CAA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAAGTATTGGCCAGTCCTaGATTCTTAGAGGAATTCCA +
Preference number: 3 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLSIGQS*ILRGIP
Trigger: TGGAATTCCTCTAAGAATCAAGGACTGGCCAATACT...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR GCA 72 bp TCTAAAACAACAAAGAACTTTCAGTCTCATCAGATGTaGATTCTCTCTTTAGATGAAAATGTAGCATGGTTC +
Preference number: 3 (lower is better)
Translates to: SKTTKNFQSHQM*ILSLDENVAWF
Trigger: GAACCATGCTACATTTTCATCTAAAGAGAGAATGCACATCTGATGAGACTGAAAGTTCTTTGTTGTTTTAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATATGGGGTCCCACACCTaGGCCAGGCGCGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDMGSHT*ARRGLH
Trigger: GTGGAGACCGCGCCTGGCTCAGGTGTGGGACCCCAT...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000488574.5
CDS-3UTR CCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATGGGAGGAGGAGGAGGTaGGCAGTCGGGACCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDGRRRR*AVGTQG
Trigger: ACCCTGGGTCCCGACTGCCCACCTCCTCCTCCTCCC...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGCGCCGGCGAAGACTTTaGGGCCTTGGCAGGACAATT +
Preference number: 4 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQRRRRL*GLGRTI
Trigger: AATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCG...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGCTGGGCCCGATGCTATaGGGCGCCCATCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQLGPML*GAHQLL
Trigger: AAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTACCTGGTGGTGGCTTaGAATGTGAGGCAACACCAG +
Preference number: 4 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQYLVVA*NVRQHQ
Trigger: CTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTA...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATAGGCCCTCGTGGTACTaGTCAATCAGCGCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDRPSWY*SISAGS
Trigger: CGAGCCTGCGCTGATTGACCAGTACCACGAGGGCCT...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCCACCAGCGCCCGGGGTaGCGAGCGTGGCTTGCGAGC +
Preference number: 4 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPHQRPG*RAWLAS
Trigger: GCTCGCAAGCCACGCTCGCCACCCCGGGCGCTGGTG...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGGCGGTCTCCACTGGGTaGTCCGCAGCCCGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSAVSTG*SAARSG
Trigger: GCCACTCCGGGCTGCGGAGCACCCAGTGGAGACCGC...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000488574.5
CDS-3UTR GCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGGGGTGGGGCAGCAGCTaGTGCAGCACCGCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSGWGSS*CSTAEL
Trigger: GAGCTCCGCGGTGCTGCAGCAGCTGCTGCCCCACCC...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCACCAGCGCCCGGGGTaGCGAGCGTGGCTTGCGAGC +
Preference number: 4 (lower is better)
Translates to: WARCYGAPINCFHKYWPVHQRPG*RAWLAS
Trigger: GCTCGCAAGCCACGCTCGCCACCCCGGGCGCTGGTG...GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATGACAGCACCTCTCGGTaGTCTCCCAGGTCAACTATC +
Preference number: 4 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDDSTSR*SPRSTI
Trigger: GATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTC...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTTCCAATCCAGGTCCTaGGCAATCATCTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQFQSRS*AIIWKA
Trigger: TGCTTTCCAGATGATTGCCCAGGACCTGGATTGGAA...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTCCTGCGTCAGGCGCATaGGGGCACCTCCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECPASGA*GHLPPA
Trigger: AGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGG...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGCCTGCGTCAGGCGCATaGGGGCACCTCCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKPASGA*GHLPPA
Trigger: AGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGG...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTGGCAAATGTCCGTGTaGACATGCCAGGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDWQMSV*TCQGYR
Trigger: TCTGTAGCCCTGGCATGTGCACACGGACATTTGCCA...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATAGGCGCGGTCTCCACTaGGTGCTCCGCAGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDRRGLH*VLRSPE
Trigger: CTCCGGGCTGCGGAGCACCCAGTGGAGACCGCGCCT...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000488574.5
CDS-3UTR CCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATACACACGCACTCTTATaGCCGGTGTGCTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDTHALL*PVCLEL
Trigger: CAACTCCAAGCACACCGGCCATAAGAGTGCGTGTGT...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTTGGAGGCGGCGGCTGTaGCGGCGGGTACTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LGPMLWGAHQLLPQVLASWRRRL*RRVLWY
Trigger: GTACCACAGTACCCGCCGCCACAGCCGCCGCCTCCA...ACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGGGGTGGGGCAGCAGCTaGTGCAGCACCGCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLGWGSS*CSTAEL
Trigger: GAGCTCCGCGGTGCTGCAGCAGCTGCTGCCCCACCC...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGGCGTGGCTTGCGAGCTaGAGCAGCCCTGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWAWLAS*SSPGQP
Trigger: AGGCTGGCCAGGGCTGCTGCAGCTCGCAAGCCACGC...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTGTGGGGATGGAGGCCTaGATCCTGGCCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LGPMLWGAHQLLPQVLASVGMEA*ILAPSS
Trigger: GGAAGAGGGGGCCAGGATCCAGGCCTCCATCCCCAC...ACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp ACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCGGGAGGAGGAGGAGGTaGGCAGTCGGGACCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TTGPDAMGRPSIASTSIGGRRRR*AVGTQG
Trigger: ACCCTGGGTCCCGACTGCCCACCTCCTCCTCCTCCC...GCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTTACATCTCTGTGTGTaGCAGCAAAATGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQLHLCV*QQNGVS
Trigger: TGAGACTCCATTTTGCTGCCACACACAGAGATGTAA...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGCGCTCCAGCTTTGCTaGGGCCCAACGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTALQLC*GPTGST
Trigger: CGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGC...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGTGGGAGAGCTCCTCCTaGATGTGGTCGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PGESYWVGRVRGICGVCLWESSS*MWSLRP
Trigger: GGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCA...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGTTCTGGCCCGGTCGCTaGAGGTCCCTCTACAGCGGG +
Preference number: 4 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWFWPGR*RSLYSG
Trigger: CCCGCTGTAGAGGGACCTTCAGCGACCGGGCCAGAA...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGGGTGGGGCAGCAGCTaGTGCAGCACCGCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQGWGSS*CSTAEL
Trigger: GAGCTCCGCGGTGCTGCAGCAGCTGCTGCCCCACCC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGCGTGGCTTGCGAGCTaGAGCAGCCCTGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGAWLAS*SSPGQP
Trigger: AGGCTGGCCAGGGCTGCTGCAGCTCGCAAGCCACGC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTTGGCGGTTGTGGTGCTaGTGGTGGGAGCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: LGPMLWGAHQLLPQVLASWRLWC*WWERWW
Trigger: CCACCATCGCTCCCACCACCAGCACCACAACCGCCA...ACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGGGGAGGAGGAGGAGGTaGGCAGTCGGGACCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLGRRRR*AVGTQG
Trigger: ACCCTGGGTCCCGACTGCCCACCTCCTCCTCCTCCC...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGCCAGGCGAATCCTACTaGGTAGGTCGGGTACGCGGC +
Preference number: 4 (lower is better)
Translates to: PGESYWVGRVRGICGVCLPGESY*VGRVRG
Trigger: GCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTGGAGGCGGCGGCTGTaGCGGCGGGTACTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGWRRRL*RRVLWY
Trigger: GTACCACAGTACCCGCCGCCACAGCCGCCGCCTCCA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGCGCTCCAGCTTTGCTaGGGCCCAACGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAALQLC*GPTGST
Trigger: CGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGC...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGCCTGAATGTGGTCGCTaGGGCCCTCGTGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: PGESYWVGRVRGICGVCLPECGR*GPRGTG
Trigger: ACCAGTACCACGAGGGCCTCAGCGACCACATTCAGG...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGATTCTGGCCCGGTCGCTaGAGGTCCCTCTACAGCGGG +
Preference number: 4 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRFWPGR*RSLYSG
Trigger: CCCGCTGTAGAGGGACCTTCAGCGACCGGGCCAGAA...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACATTCTGGCCCGGTCGCTaGAGGTCCCTCTACAGCGGG +
Preference number: 4 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTFWPGR*RSLYSG
Trigger: CCCGCTGTAGAGGGACCTTCAGCGACCGGGCCAGAA...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCACTCCGCAGCCCGGAGTaGCTCCGGACGACAGCCCGC +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSLRSPE*LRTTAR
Trigger: GCGGGCTGTCGTCCGGAGCCACTCCGGGCTGCGGAG...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000488574.5
CDS-3UTR CCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGCGAAGACAGGAAGGATaGGGTCCCACACCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSRRQEG*GPTPEP
Trigger: TGGCTCAGGTGTGGGACCCCATCCTTCCTGTCTTCG...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000488574.5
CDS-3UTR CCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGGTGGGGATGGAGGCCTaGATCCTGGCCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLVGMEA*ILAPSS
Trigger: GGAAGAGGGGGCCAGGATCCAGGCCTCCATCCCCAC...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCACAGACCCCATGCCTTaGCGCAGGCGTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPTDPMP*RRRLIL
Trigger: CAAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGT...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGTCGCTGAGGCCCTCGTaGTACTGGTCAATCAGCGCA +
Preference number: 4 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSSLRPS*YWSISA
Trigger: TGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGA...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGCACCAGCGCCCGGGGTaGCGAGCGTGGCTTGCGAGC +
Preference number: 4 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVHQRPG*RAWLAS
Trigger: GCTCGCAAGCCACGCTCGCCACCCCGGGCGCTGGTG...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTTCCCACCGGCTCGGTTaGATCTACCTGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LGPMLWGAHQLLPQVLASSHRLG*IYLVVA
Trigger: AGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGA...ACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGCCAGGCGAATCCTACTaGGTAGGTCGGGTACGCGGC +
Preference number: 4 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKPGESY*VGRVRG
Trigger: GCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTCTGGCACTGGGCCATaGAAGGAGCCAGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRSGTGP*KEPACL
Trigger: CAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGA...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCCATTGGAGTAGTCGATaGCAGACCCCATGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPHWSSR*QTPCLG
Trigger: GCCAAGGCATGGGGTCTGTCATCGACTACTCCAATG...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGTGGGAGAGCTCCTCCTaGATGTGGTCGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLWESSS*MWSLRP
Trigger: GGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCA...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTTCTGGCCCGGTCGCTaGAGGTCCCTCTACAGCGGG +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQFWPGR*RSLYSG
Trigger: CCCGCTGTAGAGGGACCTTCAGCGACCGGGCCAGAA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGGACAACTGGGCCCGATaGTATGGGGCGCCCATCAAT +
Preference number: 4 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRDNWAR*YGAPIN
Trigger: ATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTC...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCCACGGCCGGTCATCATaGTTGTCACGAAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPHGRSS*LSRSRH
Trigger: GTGTCTGCTTCGTGACAAGCATGATGACCGGCCGTG...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTTGAAGGTCTTTTGGTaGTTTAGGATGTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDLKVFW*FRMCAS
Trigger: ACTGGCACACATCCTAAAGCACCAAAAGACCTTCAA...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAATGGAGAGTTTCGTGGACAACTaGGCCCGATGCTATGGGGCG +
Preference number: 4 (lower is better)
Translates to: WDHVCSASEPLGRQGRMESFVDN*ARCYGA
Trigger: CGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACT...CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGTGGGGATGGAGGCCTaGATCCTGGCCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAVGMEA*ILAPSS
Trigger: GGAAGAGGGGGCCAGGATCCAGGCCTCCATCCCCAC...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTGGCGGCGGGTACTGTaGTACCGGAGGCTGGCGGTA +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQWRRVL*YRRLAV
Trigger: TACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGACCTTTTTCATTACGTaGATTCTGATCCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQTFFIT*ILILLK
Trigger: CTTCAAAAGGATCAGAATCCACGTAATGAAAAAGGT...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATGTAAACAGCCAAATGTaGATCAGGGACTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDVNSQM*IRDFLS
Trigger: ACTCAGAAAGTCCCTGATCCACATTTGGCTGTTTAC...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATAGGCTTGCCTATCAATaGGAGCTCTTAGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDRLAYQ*ELLDLL
Trigger: AAGAAGATCTAAGAGCTCCCATTGATAGGCAAGCCT...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCTGGTGCTCTTTTCCATaGAGATCTGGCACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPWCSFP*RSGTGP
Trigger: TGGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCA...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAATGGAGGCAACCTCTCGCCTCTaGGGGTCTTCAAAGACATGC +
Preference number: 4 (lower is better)
Translates to: WDHVCSASEPLGRQGRMEATSRL*GSSKTC
Trigger: GCATGTCTTTGAAGACCCTCAGAGGCGAGAGGTTGC...CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAATGGGAGAGCTCCTCCTaGATGTGGTCGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQWESSS*MWSLRP
Trigger: GGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCA...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTGGGAGAGCTCCTCCTaGATGTGGTCGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQWESSS*MWSLRP
Trigger: GGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATGGTGGCTTGCAATGTaGGGCAACACCAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAWWLAM*GNTSAR
Trigger: CCGGGCGCTGGTGTTGCCTCACATTGCAAGCCACCA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGGGTGGGGCAGCAGCTaGTGCAGCACCGCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVGWGSS*CSTAEL
Trigger: GAGCTCCGCGGTGCTGCAGCAGCTGCTGCCCCACCC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAATGGAGCACGGCCGGTCATCATaGTTGTCACGAAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: WDHVCSASEPLGRQGRMEHGRSS*LSRSRH
Trigger: GTGTCTGCTTCGTGACAAGCATGATGACCGGCCGTG...CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGAGCGTGGCTTGCGAGCTaGAGCAGCCCTGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: MGRPSIASTSIGQSLILRAWLAS*SSPGQP
Trigger: AGGCTGGCCAGGGCTGCTGCAGCTCGCAAGCCACGC...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGCCTGCGTCAGGCGCATaGGGGCACCTCCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSPASGA*GHLPPA
Trigger: AGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGG...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp ACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCTGGGCCCGATGCTATaGGGCGCCCATCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: TTGPDAMGRPSIASTSIGLGPML*GAHQLL
Trigger: AAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG...GCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp ACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCAGTTTCGTGGACAACTaGGCCCGATGCTATGGGGCG +
Preference number: 4 (lower is better)
Translates to: TTGPDAMGRPSIASTSIGSFVDN*ARCYGA
Trigger: CGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACT...GCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTGGCGGTTGTGGTGCTaGTGGTGGGAGCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQWRLWC*WWERWW
Trigger: CCACCATCGCTCCCACCACCAGCACCACAACCGCCA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATTTTCGCCAGGCTCGGTaGACCTTCTCCGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDFRQAR*TFSAVL
Trigger: GAGAACAGCGGAGAAGGTCCACCGAGCCTGGCGAAA...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000488574.5
CDS-3UTR CCA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAACACACGCACTCTTATaGCCGGTGTGCTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PEAPESIMARTNRVCLPGTHALL*PVCLEL
Trigger: CAACTCCAAGCACACCGGCCATAAGAGTGCGTGTGT...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGCACTCTTCCTCTATTaGAGGGGGTGGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTALFLY*RGWGSS
Trigger: GCTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGC...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGACTCTGGGAGGTCTTCTaGGCACTCTTCCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: PEAPESIMARTNRVCLPGLWEVF*ALFLYW
Trigger: CCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAG...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAATGAAGATCTGGCACTaGGCCATGAAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PEAPESIMARTNRVCLPGMKIWH*AMKGAS
Trigger: GCTGGCTCCTTTCATGGCCCAGTGCCAGATCTTCAT...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGGCCCTCGTGGTACTaGTCAATCAGCGCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGRPSWY*SISAGS
Trigger: CGAGCCTGCGCTGATTGACCAGTACCACGAGGGCCT...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGAGCAGACAGCGACTTaGCGACCTCGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGEQTAT*RPRGGR
Trigger: TCTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCCACCAGCGCCCGGGGTaGCGAGCGTGGCTTGCGAGC +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLHQRPG*RAWLAS
Trigger: GCTCGCAAGCCACGCTCGCCACCCCGGGCGCTGGTG...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGTCCCACCGGCTCGGTTaGATCTACCTGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLSHRLG*IYLVVA
Trigger: AGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGA...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAACCAGGCGGTGATCTaGGTAGACGTGCTCATCTAC +
Preference number: 4 (lower is better)
Translates to: PEAPESIMARTNRVCLPGNQAVI*VDVLIY
Trigger: GTAGATGAGCACGTCTACCCAGATCACCGCCTGGTT...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGACACCCCCTCTTCACCTaGAGAACTTGGGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: PEAPESIMARTNRVCLPGHPLFT*RTWAPL
Trigger: TAATGGAGCCCAAGTTCTCCAGGTGAAGAGGGGGTG...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCCAGGCGAATCCTACTaGGTAGGTCGGGTACGCGGC +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQPGESY*VGRVRG
Trigger: GCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACATCCGTCTCGTCCCACTaGGTACCAGGCGAATCCTAC +
Preference number: 4 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTSVSSH*VPGESY
Trigger: GTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGA...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCTGGCGGCGGGTACTGTaGTACCGGAGGCTGGCGGTA +
Preference number: 4 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGWRRVL*YRRLAV
Trigger: TACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCA...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGTGGAGGCGGCGGCTGTaGCGGCGGGTACTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVWRRRL*RRVLWY
Trigger: GTACCACAGTACCCGCCGCCACAGCCGCCGCCTCCA...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGAGGATGTGCCTCAGGTaGCCTGAAGATACAGTAGCC +
Preference number: 4 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSRMCLR*PEDTVA
Trigger: GGCTACTGTATCTTCAGGCCACCTGAGGCACATCCT...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGCGCTCCAGCTTTGCTaGGGCCCAACGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVALQLC*GPTGST
Trigger: CGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCTGGTGGCTTGCAATGTaGGGCAACACCAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGWWLAM*GNTSAR
Trigger: CCGGGCGCTGGTGTTGCCTCACATTGCAAGCCACCA...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGATGGTGGCTTGCAATGTaGGGCAACACCAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGWWLAM*GNTSAR
Trigger: CCGGGCGCTGGTGTTGCCTCACATTGCAAGCCACCA...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCGTGCCTCAGGTGGCCTaGAGATACAGTAGCCTAAAA +
Preference number: 4 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPVPQVA*RYSSLK
Trigger: TTTTAGGCTACTGTATCTTCAGGCCACCTGAGGCAC...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCCCCCGGCGAAGACTTTaGGGCCTTGGCAGGACAATT +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGPRRRL*GLGRTI
Trigger: AATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGGG...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612941.2
ENST00000617526.4
CDS-3UTR GCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGGGGGCGCCCATCAATTaGTTCCACAAGTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGESYWVGRVRGICGVCLGAPIN*FHKYWP
Trigger: TGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCC...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGACAACTGGGCCCGATaGTATGGGGCGCCCATCAAT +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGDNWAR*YGAPIN
Trigger: ATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATTCCTCTGTGAGCTTCTaGACCTGGCTCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDSSVSF*TWLCRL
Trigger: CAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGA...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGCCAGCATGTCTGGGTTaGCATCGAACTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGESYWVGRVRGICGVCLPACLG*HRTSLG
Trigger: TCCCAGAGAAGTTCGATGGCAACCCAGACATGCTGG...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp GAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACTTTCTTTTTCTTCCTaGGTCAGGCGCATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: EFRGQLGPMLWGAHQLLPLSFSS*VRRMRA
Trigger: TGCCCGCATGCGCCTGACGCAGGAAGAAAAAGAAAG...TGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGTTTCGTGGACAACTaGGCCCGATGCTATGGGGCG +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGSFVDN*ARCYGA
Trigger: CGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACT...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCGAGCGATGGTGGTATTaGAGAATACATCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPERWWY*RIHPAV
Trigger: CACTGCCGGATGTATTCTCCAATACCACCATCGCTC...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGTTGTGGTGCTGGTGGTaGGAGCGATGGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWLWCWW*ERWWYW
Trigger: CCAATACCACCATCGCTCCCACCACCAGCACCACAA...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp ACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCTTGTGGTGCTGGTGGTaGGAGCGATGGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: TTGPDAMGRPSIASTSIGLWCWW*ERWWYW
Trigger: CCAATACCACCATCGCTCCCACCACCAGCACCACAA...GCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCCGAAGACAGGAAGGATaGGGTCCCACACCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGRRQEG*GPTPEP
Trigger: TGGCTCAGGTGTGGGACCCCATCCTTCCTGTCTTCG...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482108.1
CDS-3UTR CCA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATCCTCATCCTCAGGGGTaGGTTCCACTTGCTCTCGAA +
Preference number: 4 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDPHPQG*VPLALE
Trigger: TTCGAGAGCAAGTGGAACCCACCCCTGAGGATGAGG...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGCTCTGGGAGGTCTTCTaGGCACTCTTCCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: PGESYWVGRVRGICGVCLLWEVF*ALFLYW
Trigger: CCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAG...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAATGGAGAGGAGCCAGCATGTCTaGGTTGCCATCGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: WDHVCSASEPLGRQGRMERSQHV*VAIELL
Trigger: GAGAAGTTCGATGGCAACCCAGACATGCTGGCTCCT...CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGTCCGTCTCGTCCCACTaGGTACCAGGCGAATCCTAC +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLSVSSH*VPGESY
Trigger: GTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGA...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTGTGGTACCGGAGGCTaGCGGTACCAGTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGCGTGG*RYQCGF
Trigger: GAATCCACACTGGTACCGCCAGCCTCCGGTACCACA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCTGGCGGCGGGTACTGTaGTACCGGAGGCTGGCGGTA +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTWRRVL*YRRLAV
Trigger: TACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCA...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGTGGAGGCGGCGGCTGTaGCGGCGGGTACTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLWRRRL*RRVLWY
Trigger: GTACCACAGTACCCGCCGCCACAGCCGCCGCCTCCA...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTTGGAGGCGGCGGCTGTaGCGGCGGGTACTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASWRRRL*RRVLWY
Trigger: GTACCACAGTACCCGCCGCCACAGCCGCCGCCTCCA...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTCAACTATCAGGTCGTaGGTTTCGTGGACAACTGGG +
Preference number: 4 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRSTIRS*VSWTTG
Trigger: CCCAGTTGTCCACGAAACTCACGACCTGATAGTTGA...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGGACAGCACCTCTCGGTaGTCTCCCAGGTCAACTATC +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLDSTSR*SPRSTI
Trigger: GATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTC...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAGGGAAGAATGGAGACTaGGTCACATCAAATGACAGC +
Preference number: 4 (lower is better)
Translates to: PEAPESIMARTNRVCLPGGKNGD*VTSNDS
Trigger: GCTGTCATTTGATGTGACTCAGTCTCCATTCTTCCC...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACATGGTGCTCTTTTCCATaGAGATCTGGCACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTWCSFP*RSGTGP
Trigger: TGGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCA...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCACCTGAATGTGGTCGCTaGGGCCCTCGTGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: GRMETESHQMTAPLGDLPPECGR*GPRGTG
Trigger: ACCAGTACCACGAGGGCCTCAGCGACCACATTCAGG...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCACGCCGGCGAAGACTTTaGGGCCTTGGCAGGACAATT +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQARRRRL*GLGRTI
Trigger: AATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCG...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp GAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCATTCAGGTTCGGACAGTaGATACACATGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: EFRGQLGPMLWGAHQLLPFRFGQ*IHMSTG
Trigger: CCCAGTGGACATGTGTATTCACTGTCCGAACCTGAA...TGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTTTCAGGTTCGGACAGTaGATACACATGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: LGPMLWGAHQLLPQVLASFRFGQ*IHMSTG
Trigger: CCCAGTGGACATGTGTATTCACTGTCCGAACCTGAA...ACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTGCCTCAGTCCTCCAGTaGTTTAAAAAGAGGGTACCG +
Preference number: 4 (lower is better)
Translates to: LGPMLWGAHQLLPQVLASASVLQ*FKKRVP
Trigger: CGGTACCCTCTTTTTAAATCACTGGAGGACTGAGGC...ACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGAACCAGGCAGGAAAATaGCACAAATCCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PGESYWVGRVRGICGVCLNQAGK*HKSCSR
Trigger: CCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTT...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCAAATGCTCCAGTTCTaGGGAGCCTCTCATTCACAG +
Preference number: 4 (lower is better)
Translates to: WARCYGAPINCFHKYWPVQMLQF*GASHSQ
Trigger: CTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTG...GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGAGGCACCCTGCAGCTTaGAGATCAATTGACAACTGT +
Preference number: 4 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSRHPAA*RSIDNC
Trigger: ACAGTTGTCAATTGATCTTCAAGCTGCAGGGTGCCT...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGACAACTGGGCCCGATaGTATGGGGCGCCCATCAAT +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQDNWAR*YGAPIN
Trigger: ATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACATTCTGCACCTGGCTCTaGAGGTTGTTGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTFCTWL*RLLFSS
Trigger: GGAGGAGAACAACAACCTGCAGAGCCAGGTGCAGAA...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTCCTCTGTGAGCTTCTaGACCTGGCTCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGSSVSF*TWLCRL
Trigger: CAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACACACGGCCGGTCATCATaGTTGTCACGAAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTHGRSS*LSRSRH
Trigger: GTGTCTGCTTCGTGACAAGCATGATGACCGGCCGTG...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTCCTGCGTCAGGCGCATaGGGGCACCTCCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTPASGA*GHLPPA
Trigger: AGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGG...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTCTTTCTTTTTCTTCCTaGGTCAGGCGCATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECLSFSS*VRRMRA
Trigger: TGCCCGCATGCGCCTGACGCAGGAAGAAAAAGAAAG...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp ACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCTGGCAAATGTCCGTGTaGACATGCCAGGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: TTGPDAMGRPSIASTSIGWQMSV*TCQGYR
Trigger: TCTGTAGCCCTGGCATGTGCACACGGACATTTGCCA...GCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACTGGGCCCGATGCTATaGGGCGCCCATCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQLGPML*GAHQLL
Trigger: AAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCTGGGCCCGATGCTATaGGGCGCCCATCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQLGPML*GAHQLL
Trigger: AAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAATGGAGGAGCGATGGTGGTATTaGAGAATACATCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: WDHVCSASEPLGRQGRMEERWWY*RIHPAV
Trigger: CACTGCCGGATGTATTCTCCAATACCACCATCGCTC...CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTTGTGGTGCTGGTGGTaGGAGCGATGGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGLWCWW*ERWWYW
Trigger: CCAATACCACCATCGCTCCCACCACCAGCACCACAA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCTCCGCAGCCCGGAGTaGCTCCGGACGACAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSLRSPE*LRTTAR
Trigger: GCGGGCTGTCGTCCGGAGCCACTCCGGGCTGCGGAG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482108.1
CDS-3UTR CCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGAGGCGCGGTCTCCACTaGGTGCTCCGCAGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVARRGLH*VLRSPE
Trigger: CTCCGGGCTGCGGAGCACCCAGTGGAGACCGCGCCT...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000488574.5
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGTGGGGATGGAGGCCTaGATCCTGGCCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVVGMEA*ILAPSS
Trigger: GGAAGAGGGGGCCAGGATCCAGGCCTCCATCCCCAC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGTGGGGATGGAGGCCTaGATCCTGGCCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASVGMEA*ILAPSS
Trigger: GGAAGAGGGGGCCAGGATCCAGGCCTCCATCCCCAC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGGTGAGCTTCTGCACCTaGCTCTGCAGGTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWVSFCT*LCRLLF
Trigger: GAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCAC...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAATCGCTGAGGCCCTCGTaGTACTGGTCAATCAGCGCA +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQSLRPS*YWSISA
Trigger: TGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGA...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATCGCTGAGGCCCTCGTaGTACTGGTCAATCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQASLRPS*YWSISA
Trigger: TGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGAGAGCAGACAGCGACTTaGCGACCTCGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGEQTAT*RPRGGR
Trigger: TCTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTC...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCACCAGCGCCCGGGGTaGCGAGCGTGGCTTGCGAGC +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSHQRPG*RAWLAS
Trigger: GCTCGCAAGCCACGCTCGCCACCCCGGGCGCTGGTG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCATCCCACCGGCTCGGTTaGATCTACCTGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GRMETESHQMTAPLGDLPSHRLG*IYLVVA
Trigger: AGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGA...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGGACGTGCTCATCTACTaGAGTGTACACATTCTGGAC +
Preference number: 4 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSDVLIY*SVHILD
Trigger: GTCCAGAATGTGTACACTCCAGTAGATGAGCACGTC...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTAACCAGGCGGTGATCTaGGTAGACGTGCTCATCTAC +
Preference number: 4 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECNQAVI*VDVLIY
Trigger: GTAGATGAGCACGTCTACCCAGATCACCGCCTGGTT...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAGGATGTGCCTCAGGTaGCCTGAAGATACAGTAGCC +
Preference number: 4 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKRMCLR*PEDTVA
Trigger: GGCTACTGTATCTTCAGGCCACCTGAGGCACATCCT...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCGACTTTTGCTTGCAGTaGTGGCAAATGTCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: WARCYGAPINCFHKYWPVDFCLQ*WQMSVC
Trigger: GCACACGGACATTTGCCACCACTGCAAGCAAAAGTC...GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGACAGCACCTCTCGGTaGTCTCCCAGGTCAACTATC +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQDSTSR*SPRSTI
Trigger: GATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTATGGGGTCCCACACCTaGGCCAGGCGCGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTMGSHT*ARRGLH
Trigger: GTGGAGACCGCGCCTGGCTCAGGTGTGGGACCCCAT...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482108.1
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATGGTGTTCTCCTCTGTaGGCTTCTGCACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAWCSPL*ASAPGS
Trigger: AGAGCCAGGTGCAGAAGCTCACAGAGGAGAACACCA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAATGGTGTTCTCCTCTGTaGGCTTCTGCACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQWCSPL*ASAPGS
Trigger: AGAGCCAGGTGCAGAAGCTCACAGAGGAGAACACCA...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGCGCTCCAGCTTTGCTaGGGCCCAACGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTALQLC*GPTGST
Trigger: CGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGACGCCGGCGAAGACTTTaGGGCCTTGGCAGGACAATT +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGRRRRL*GLGRTI
Trigger: AATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCG...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAATGGAGCGAGTTGCTGCTCCTTaGGAATTAACAGAACCATGG +
Preference number: 4 (lower is better)
Translates to: WDHVCSASEPLGRQGRMERVAAP*ELTEPW
Trigger: CCATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCG...CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGACAACTGGGCCCGATaGTATGGGGCGCCCATCAAT +
Preference number: 4 (lower is better)
Translates to: GRMETESHQMTAPLGDLPDNWAR*YGAPIN
Trigger: ATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTC...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGCGGTCTCCACTGGGTaGTCCGCAGCCCGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSAVSTG*SAARSG
Trigger: GCCACTCCGGGCTGCGGAGCACCCAGTGGAGACCGC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482108.1
CDS-3UTR GCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATCCTCTGTGAGCTTCTaGACCTGGCTCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQASSVSF*TWLCRL
Trigger: CAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCCCAGCATGTCTGGGTTaGCATCGAACTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGPACLG*HRTSLG
Trigger: TCCCAGAGAAGTTCGATGGCAACCCAGACATGCTGG...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCCTGCGTCAGGCGCATaGGGGCACCTCCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSPASGA*GHLPPA
Trigger: AGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCCGAACAGGGTGTGTCTaGCCGGAAGATGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGRTGCV*PEDESG
Trigger: TCCAGATTCATCTTCCGGGCAGACACACCCTGTTCG...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGGATGAAATGCCCAGATaGATATGGAGGCAGACACAT +
Preference number: 4 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSDEMPR*IWRQTH
Trigger: ATGTGTCTGCCTCCATATGCATCTGGGCATTTCATC...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp GAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCAGGACTGAAGATGAAATaGCCAGATGCATATGGAGGC +
Preference number: 4 (lower is better)
Translates to: EFRGQLGPMLWGAHQLLPGLKMK*PDAYGG
Trigger: GCCTCCATATGCATCTGGGCATTTCATCTTCAGTCC...TGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTTGGCGGTTGTGGTGCTaGTGGTGGGAGCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFWRLWC*WWERWW
Trigger: CCACCATCGCTCCCACCACCAGCACCACAACCGCCA...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTGATGAAAATGTAGCATaGTTCCCGCAGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECDENVA*FPQGSP
Trigger: TGGAGAGCCCTGCGGGAACCATGCTACATTTTCATC...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGGATGAAAATGTAGCATaGTTCCCGCAGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWDENVA*FPQGSP
Trigger: TGGAGAGCCCTGCGGGAACCATGCTACATTTTCATC...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGGGAGGAGGAGGAGGTaGGCAGTCGGGACCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTGRRRR*AVGTQG
Trigger: ACCCTGGGTCCCGACTGCCCACCTCCTCCTCCTCCC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAGTGAGCTTCTGCACCTaGCTCTGCAGGTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRVSFCT*LCRLLF
Trigger: GAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCAC...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCCTCTGGGAGGTCTTCTaGGCACTCTTCCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGLWEVF*ALFLYW
Trigger: CCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAG...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGAACAGACCCCATGCCTTaGCGCAGGCGTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGTDPMP*RRRLIL
Trigger: CAAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGT...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCATTCCAATCCAGGTCCTaGGCAATCATCTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: EFRGQLGPMLWGAHQLLPFQSRS*AIIWKA
Trigger: TGCTTTCCAGATGATTGCCCAGGACCTGGATTGGAA...TGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGATCGCTGAGGCCCTCGTaGTACTGGTCAATCAGCGCA +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGSLRPS*YWSISA
Trigger: TGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGA...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCAGAGCAGACAGCGACTTaGCGACCTCGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSEQTAT*RPRGGR
Trigger: TCTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTC...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAATGGAGGACGTGCTCATCTACTaGAGTGTACACATTCTGGAC +
Preference number: 4 (lower is better)
Translates to: WDHVCSASEPLGRQGRMEDVLIY*SVHILD
Trigger: GTCCAGAATGTGTACACTCCAGTAGATGAGCACGTC...CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCGACGTGCTCATCTACTaGAGTGTACACATTCTGGAC +
Preference number: 4 (lower is better)
Translates to: WARCYGAPINCFHKYWPVDVLIY*SVHILD
Trigger: GTCCAGAATGTGTACACTCCAGTAGATGAGCACGTC...GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACAGGTACGCGGCATATGTaGGGTATGTTTGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTGTRHM*GMFGIQ
Trigger: CTGGATACCAAACATACCCCACATATGCCGCGTACC...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGCCAGGCGAATCCTACTaGGTAGGTCGGGTACGCGGC +
Preference number: 4 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSPGESY*VGRVRG
Trigger: GCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGCTGGCGGTACCAGTGTaGATTCCAAGTGATCATCAC +
Preference number: 4 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWLAVPV*IPSDHH
Trigger: GTGATGATCACTTGGAATCCACACTGGTACCGCCAG...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACACTGGCGGTACCAGTGTaGATTCCAAGTGATCATCAC +
Preference number: 4 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTLAVPV*IPSDHH
Trigger: GTGATGATCACTTGGAATCCACACTGGTACCGCCAG...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGGCTCAAACTGTGCTTTaGCAATTAAAGCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSAQTVL*QLKPAS
Trigger: AGAGGCAGGCTTTAATTGCCAAAGCACAGTTTGAGC...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCTTTTGCTTGCAGTGGTaGCAAATGTCCGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: WARCYGAPINCFHKYWPVFCLQW*QMSVCT
Trigger: TGTGCACACGGACATTTGCCACCACTGCAAGCAAAA...GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGCTGAGTCACATCAAATaGCAGCACCTCTCGGTGATC +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLLSHIK*QHLSVI
Trigger: GATCACCGAGAGGTGCTGTCATTTGATGTGACTCAG...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGATCGAGTGCTCCATGTaGTATTGGGATCATGTGTGC +
Preference number: 4 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKIECSM*YWDHVC
Trigger: GCACACATGATCCCAATATCACATGGAGCACTCGAT...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGGCTTCATTTCCATCATaGAAGCTGGGTAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRASFPS*KLGSCA
Trigger: TGCACAACTACCCAGCTTTCATGATGGAAATGAAGC...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCACTTGGCGCAGGCGTCTaGTCTTGCGTTTGGCAACCT +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSLGAGV*SCVWQP
Trigger: AGGTTGCCAAACGCAAGATCAGACGCCTGCGCCAAG...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCCTGAATGTGGTCGCTaGGGCCCTCGTGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFPECGR*GPRGTG
Trigger: ACCAGTACCACGAGGGCCTCAGCGACCACATTCAGG...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAGCCTTCTCTCAATGTaGATGCACTGCCCAATCAGA +
Preference number: 4 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKSLLSM*MHCPIR
Trigger: TCTGATTGGGCAGTGCATTCACATTGAGAGAAGGCT...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTGGTGGCTTGCAATGTaGGGCAACACCAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLWWLAM*GNTSAR
Trigger: CCGGGCGCTGGTGTTGCCTCACATTGCAAGCCACCA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTGGTGGCTTGCAATGTaGGGCAACACCAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFWWLAM*GNTSAR
Trigger: CCGGGCGCTGGTGTTGCCTCACATTGCAAGCCACCA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGCATATTCGTGATCAATaGAGTTGCCAGAAGCACCAG +
Preference number: 4 (lower is better)
Translates to: PGESYWVGRVRGICGVCLHIRDQ*SCQKHQ
Trigger: CTGGTGCTTCTGGCAACTTCATTGATCACGAATATG...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGTTCAGGTTCGGACAGTaGATACACATGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLFRFGQ*IHMSTG
Trigger: CCCAGTGGACATGTGTATTCACTGTCCGAACCTGAA...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGGGTGGTCACATTTCATaGACATCTAACAACGCTGGA +
Preference number: 4 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRGGHIS*TSNNAG
Trigger: TCCAGCGTTGTTAGATGTTCATGAAATGTGACCACC...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCGGTGGTCACATTTCATaGACATCTAACAACGCTGGA +
Preference number: 4 (lower is better)
Translates to: WARCYGAPINCFHKYWPVGGHIS*TSNNAG
Trigger: TCCAGCGTTGTTAGATGTTCATGAAATGTGACCACC...GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACAGCCCTCAAAGGTGATTaGGAGGTGGTCACATTTCAT +
Preference number: 4 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTALKGD*EVVTFH
Trigger: ATGAAATGTGACCACCTCTCAATCACCTTTGAGGGC...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp GAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCATTTAGCCCTCAAAGGTaGTTGAGAGGTGGTCACATT +
Preference number: 4 (lower is better)
Translates to: EFRGQLGPMLWGAHQLLPFSPQR*LRGGHI
Trigger: AATGTGACCACCTCTCAATCACCTTTGAGGGCTAAA...TGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAGGCACCCTGCAGCTTaGAGATCAATTGACAACTGT +
Preference number: 4 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKRHPAA*RSIDNC
Trigger: ACAGTTGTCAATTGATCTTCAAGCTGCAGGGTGCCT...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTCGTTCTTGTCGTTGGTaGACTTCTCCAGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECRSCRW*TSPDFC
Trigger: GCAAAAGTCTGGAGAAGTTCACCAACGACAAGAACG...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGGGGCGCCCATCAATTaGTTCCACAAGTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQGAPIN*FHKYWP
Trigger: TGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATTCTGCACCTGGCTCTaGAGGTTGTTGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAFCTWL*RLLFSS
Trigger: GGAGGAGAACAACAACCTGCAGAGCCAGGTGCAGAA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAATACCTGGTGGTGGCTTaGAATGTGAGGCAACACCAG +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQYLVVA*NVRQHQ
Trigger: CTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTA...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTACCTGGTGGTGGCTTaGAATGTGAGGCAACACCAG +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQYLVVA*NVRQHQ
Trigger: CTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGAAAATCTCGAAGAGCTaGCATTTCAGGTTCGGACAG +
Preference number: 4 (lower is better)
Translates to: PGESYWVGRVRGICGVCLKISKS*HFRFGQ
Trigger: CTGTCCGAACCTGAAATGGCAGCTCTTCGAGATTTT...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp ACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCGAATTCAGTGTACGTTaGCAGGTGTGCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TTGPDAMGRPSIASTSIGEFSVR*QVCLVF
Trigger: GAAGACCAAGCACACCTGGCAACGTACACTGAATTC...GCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGTTTCAGAGAGGATGTaGCTCAGGTGGCCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGVSERM*LRWPED
Trigger: ATCTTCAGGCCACCTGAGGCACATCCTCTCTGAAAC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGGTTTCAGAGAGGATGTaGCTCAGGTGGCCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLVSERM*LRWPED
Trigger: ATCTTCAGGCCACCTGAGGCACATCCTCTCTGAAAC...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp GAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCAGAAGCCTTTCCACACTaGACCGATAATTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: EFRGQLGPMLWGAHQLLPEAFPH*TDNFGF
Trigger: GAAGCCAAAATTATCGGTGCAGTGTGGAAAGGCTTC...TGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCGAGAACCAGTCGAGTTaGTGCTCCTTGAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: WARCYGAPINCFHKYWPVENQSS*CSLRIN
Trigger: GTTAATTCTCAAGGAGCAGCAACTCGACTGGTTCTC...GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp GAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCAGATGAAATGCCCAGATaGATATGGAGGCAGACACAT +
Preference number: 4 (lower is better)
Translates to: EFRGQLGPMLWGAHQLLPDEMPR*IWRQTH
Trigger: ATGTGTCTGCCTCCATATGCATCTGGGCATTTCATC...TGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTGGCAAATGTCCGTGTaGACATGCCAGGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQWQMSV*TCQGYR
Trigger: TCTGTAGCCCTGGCATGTGCACACGGACATTTGCCA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGATAAGTTGGTCTCCCTaGAGTTCCCTCCGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: PGESYWVGRVRGICGVCLISWSP*SSLRVY
Trigger: ATAAACTCGGAGGGAACTGCAGGGAGACCAACTTAT...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAATGGAGATAAGTTGGTCTCCCTaGAGTTCCCTCCGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: WDHVCSASEPLGRQGRMEISWSP*SSLRVY
Trigger: ATAAACTCGGAGGGAACTGCAGGGAGACCAACTTAT...CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTGGCGGTTGTGGTGCTaGTGGTGGGAGCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLWRLWC*WWERWW
Trigger: CCACCATCGCTCCCACCACCAGCACCACAACCGCCA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAATGGAGGATGTGAGATGTCTGTaGTGGATGACAACTGGATCA +
Preference number: 4 (lower is better)
Translates to: WDHVCSASEPLGRQGRMEDVRCL*WMTTGS
Trigger: TGATCCAGTTGTCATCCACCACAGACATCTCACATC...CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp ACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCTTCGTTCGGTCATGTTaGGGACACACGCACTCTTAT +
Preference number: 4 (lower is better)
Translates to: TTGPDAMGRPSIASTSIGFVRSC*GHTHSY
Trigger: ATAAGAGTGCGTGTGTCCCCAACATGACCGAACGAA...GCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGCACTCTTCCTCTATTaGAGGGGGTGGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVALFLY*RGWGSS
Trigger: GCTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCTCTGGGAGGTCTTCTaGGCACTCTTCCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQLWEVF*ALFLYW
Trigger: CCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGAGGAGCCAGCATGTCTaGGTTGCCATCGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQRSQHV*VAIELL
Trigger: GAGAAGTTCGATGGCAACCCAGACATGCTGGCTCCT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAATGAAGATCTGGCACTaGGCCATGAAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQMKIWH*AMKGAS
Trigger: GCTGGCTCCTTTCATGGCCCAGTGCCAGATCTTCAT...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCAGGCCCTCGTGGTACTaGTCAATCAGCGCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVRPSWY*SISAGS
Trigger: CGAGCCTGCGCTGATTGACCAGTACCACGAGGGCCT...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGAGCAGACAGCGACTTaGCGACCTCGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVEQTAT*RPRGGR
Trigger: TCTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTTCCCACCGGCTCGGTTaGATCTACCTGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASSHRLG*IYLVVA
Trigger: AGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGA...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCACACCAGAATCGATCATaGCTCGGACGAACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAHQNRS*LGRTGC
Trigger: ACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTG...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACACCCCCTCTTCACCTaGAGAACTTGGGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQHPLFT*RTWAPL
Trigger: TAATGGAGCCCAAGTTCTCCAGGTGAAGAGGGGGTG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAGGTACGCGGCATATGTaGGGTATGTTTGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRGTRHM*GMFGIQ
Trigger: CTGGATACCAAACATACCCCACATATGCCGCGTACC...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCTGTGGTACCGGAGGCTaGCGGTACCAGTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTCGTGG*RYQCGF
Trigger: GAATCCACACTGGTACCGCCAGCCTCCGGTACCACA...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCATGTGGTACCGGAGGCTaGCGGTACCAGTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSCGTGG*RYQCGF
Trigger: GAATCCACACTGGTACCGCCAGCCTCCGGTACCACA...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAGGTTTTTCCTGCTCCTaGGAGAACCAGTCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQGFSCS*ENQSSC
Trigger: GCAACTCGACTGGTTCTCCCAGGAGCAGGAAAAACC...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGACTTTTGCTTGCAGTaGTGGCAAATGTCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGDFCLQ*WQMSVC
Trigger: GCACACGGACATTTGCCACCACTGCAAGCAAAAGTC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATCAACTATCAGGTCGTaGGTTTCGTGGACAACTGGG +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQASTIRS*VSWTTG
Trigger: CCCAGTTGTCCACGAAACTCACGACCTGATAGTTGA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCTGAGTCACATCAAATaGCAGCACCTCTCGGTGATC +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQLSHIK*QHLSVI
Trigger: GATCACCGAGAGGTGCTGTCATTTGATGTGACTCAG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTTCTGGCACTGGGCCATaGAAGGAGCCAGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFSGTGP*KEPACL
Trigger: CAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGA...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTTCTGGCACTGGGCCATaGAAGGAGCCAGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASSGTGP*KEPACL
Trigger: CAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGA...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATGCTTCATTTCCATCATaGAAGCTGGGTAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDASFPS*KLGSCA
Trigger: TGCACAACTACCCAGCTTTCATGATGGAAATGAAGC...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCTTGGCGCAGGCGTCTaGTCTTGCGTTTGGCAACCT +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFLGAGV*SCVWQP
Trigger: AGGTTGCCAAACGCAAGATCAGACGCCTGCGCCAAG...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGCTTGGCGCAGGCGTCTaGTCTTGCGTTTGGCAACCT +
Preference number: 4 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLLGAGV*SCVWQP
Trigger: AGGTTGCCAAACGCAAGATCAGACGCCTGCGCCAAG...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAAGCCTTCTCTCAATGTaGATGCACTGCCCAATCAGA +
Preference number: 4 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTSLLSM*MHCPIR
Trigger: TCTGATTGGGCAGTGCATTCACATTGAGAGAAGGCT...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAATTCAGGTTCGGACAGTaGATACACATGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQFRFGQ*IHMSTG
Trigger: CCCAGTGGACATGTGTATTCACTGTCCGAACCTGAA...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAGCTCTCAGAAAATGTTaGAGGTCTTTTGGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: PEAPESIMARTNRVCLPGALRKC*RSFGAL
Trigger: TAAAGCACCAAAAGACCTTCAACATTTTCTGAGAGC...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGGCTCTCAGAAAATGTTaGAGGTCTTTTGGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSALRKC*RSFGAL
Trigger: TAAAGCACCAAAAGACCTTCAACATTTTCTGAGAGC...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCCCAGGCATAGGAGTGTaGATCTGGGTGCTAAATCAT +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGPGIGV*IWVLNH
Trigger: ATGATTTAGCACCCAGATTCACACTCCTATGCCTGG...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGAGGTGTCACTGGGCTaGAGACAACTCTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQEVSLG*RQLLCC
Trigger: ACAACACAAGAGTTGTCTTCAGCCCAGTGACACCTC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCAAATGCTCCAGTTCTaGGGAGCCTCTCATTCACAG +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQQMLQF*GASHSQ
Trigger: CTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGGCACCCTGCAGCTTaGAGATCAATTGACAACTGT +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGRHPAA*RSIDNC
Trigger: ACAGTTGTCAATTGATCTTCAAGCTGCAGGGTGCCT...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGACAACTGGGCCCGATaGTATGGGGCGCCCATCAAT +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFDNWAR*YGAPIN
Trigger: ATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCCCAGCATGTCTGGGTTaGCATCGAACTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGPACLG*HRTSLG
Trigger: TCCCAGAGAAGTTCGATGGCAACCCAGACATGCTGG...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAATCTGGAGCATCACTTaGAAGTGTGGAGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTIWSIT*KCGDEA
Trigger: TGCCTCATCTCCACACTTGCAAGTGATGCTCCAGAT...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp ACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCAAAATCTCGAAGAGCTaGCATTTCAGGTTCGGACAG +
Preference number: 4 (lower is better)
Translates to: TTGPDAMGRPSIASTSIGKISKS*HFRFGQ
Trigger: CTGTCCGAACCTGAAATGGCAGCTCTTCGAGATTTT...GCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGAATTCAGTGTACGTTaGCAGGTGTGCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGEFSVR*QVCLVF
Trigger: GAAGACCAAGCACACCTGGCAACGTACACTGAATTC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGGAAGCCTTTCCACACTaGACCGATAATTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWEAFPH*TDNFGF
Trigger: GAAGCCAAAATTATCGGTGCAGTGTGGAAAGGCTTC...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGGGAGTCCTTTTGATGTaGTACTCTTTAGCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRGVLLM*YSLALK
Trigger: TTTGAGGGCTAAAGAGTAGCACATCAAAAGGACTCC...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCTTGAGTCCTTTGAGTTaGTTTCTGAGGCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPLSPLS*FLRLFI
Trigger: GATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAA...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACTCCAGACTTTTGCTTaGAGTGGTGGCAAATGTCCG +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQLQTFA*SGGKCP
Trigger: CGGACATTTGCCACCACTGCAAGCAAAAGTCTGGAG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTACTTCTCCAGACTTTTaGTTGCAGTGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECTSPDF*LQWWQM
Trigger: CATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGT...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCTCTGTATCCATCTACTaGATAATAGAGTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: WARCYGAPINCFHKYWPVSVSIY*IIEWRL
Trigger: CAACCGCCACTCTATTATCCAGTAGATGGATACAGA...GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGGTGGTGGATGACAACTaGATCAATTCAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRVVDDN*INSEVQ
Trigger: TTGGACTTCTGAATTGATCCAGTTGTCATCCACCAC...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACAGATGTGAGATGTCTGTaGTGGATGACAACTGGATCA +
Preference number: 4 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTDVRCL*WMTTGS
Trigger: TGATCCAGTTGTCATCCACCACAGACATCTCACATC...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAGATGAAAATGTAGCATaGTTCCCGCAGGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQDENVA*FPQGSP
Trigger: TGGAGAGCCCTGCGGGAACCATGCTACATTTTCATC...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGAGTGAGCTTCTGCACCTaGCTCTGCAGGTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGVSFCT*LCRLLF
Trigger: GAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCAC...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCGCCATCGAACTTCTCTaGGAGGTCTTCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTAIELL*EVFWAL
Trigger: GAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGC...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCAGCCATCGAACTTCTCTaGGAGGTCTTCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSAIELL*EVFWAL
Trigger: GAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGC...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGAATGAAGATCTGGCACTaGGCCATGAAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGMKIWH*AMKGAS
Trigger: GCTGGCTCCTTTCATGGCCCAGTGCCAGATCTTCAT...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGTTCCATCATGAAAGCTaGGTAGTTGTGCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: PGESYWVGRVRGICGVCLFHHES*VVVHQV
Trigger: TACCTGATGCACAACTACCCAGCTTTCATGATGGAA...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTACAGACCCCATGCCTTaGCGCAGGCGTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFTDPMP*RRRLIL
Trigger: CAAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGT...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCAGGCCCTCGTGGTACTaGTCAATCAGCGCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLRPSWY*SISAGS
Trigger: CGAGCCTGCGCTGATTGACCAGTACCACGAGGGCCT...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGATTCACCTGGAGAACTTaGGCTCCATTAGGTGCAATC +
Preference number: 4 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRFTWRT*APLGAI
Trigger: GATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAA...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACTGGCGGTACCAGTGTaGATTCCAAGTGATCATCAC +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQLAVPV*IPSDHH
Trigger: GTGATGATCACTTGGAATCCACACTGGTACCGCCAG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTTGTGGTACCGGAGGCTaGCGGTACCAGTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFCGTGG*RYQCGF
Trigger: GAATCCACACTGGTACCGCCAGCCTCCGGTACCACA...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGAGGTTTTTCCTGCTCCTaGGAGAACCAGTCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGGFSCS*ENQSSC
Trigger: GCAACTCGACTGGTTCTCCCAGGAGCAGGAAAAACC...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCTTGGGTATGGGATTTTaGAGTCCTTTTGATGTGCTA +
Preference number: 4 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPLGMGF*SPFDVL
Trigger: TAGCACATCAAAAGGACTCCAAAATCCCATACCCAA...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCCTTAAGAGTTGGGTATaGGATTTTGGAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPLKSWV*DFGVLL
Trigger: CAAAAGGACTCCAAAATCCCATACCCAACTCTTAAG...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACCATCAAGTAATGTaGAGCTCACTAAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRYHQVM*SSLRKS
Trigger: GGACTTCCTTAGTGAGCTCCACATTACTTGATGGTA...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTGTGTGGCAGCAAAATaGAGTCTCAGCAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQCVAAK*SLSNQA
Trigger: TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGGGAAGAATGGAGACTaGGTCACATCAAATGACAGC +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAGKNGD*VTSNDS
Trigger: GCTGTCATTTGATGTGACTCAGTCTCCATTCTTCCC...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGATGTCTGTGGTGGATaGCAACTGGATCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGDVCGG*QLDQFR
Trigger: TCTGAATTGATCCAGTTGTCATCCACCACAGACATC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGGAACTGTCTGTATCTaGTGTGAGATGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAGTVCI*CEMSVV
Trigger: CACCACAGACATCTCACATCAGATACAGACAGTTCC...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCCTCCGACTGCTTCATaGCCTTCTCTCTTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQPPTAS*PSLLSC
Trigger: ACAACTTAAGAGAGAAGGTCATGAAGCAGTCGGAGG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACCTCCGACTGCTTCATaGCCTTCTCTCTTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQPPTAS*PSLLSC
Trigger: ACAACTTAAGAGAGAAGGTCATGAAGCAGTCGGAGG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTTGGTGTTCTCCTCTGTaGGCTTCTGCACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASWCSPL*ASAPGS
Trigger: AGAGCCAGGTGCAGAAGCTCACAGAGGAGAACACCA...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGATCTGGCACTGGGCCATaGAAGGAGCCAGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: RQYSESKTIDRVLHVILGSGTGP*KEPACL
Trigger: CAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGA...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAACGGACACGATCAACTaGGAAATCCCTGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GRMETESHQMTAPLGDLPTDTIN*EIPGAL
Trigger: AAGAGCACCAGGGATTTCTCAGTTGATCGTGTCCGT...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGCTTCATTTCCATCATaGAAGCTGGGTAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGASFPS*KLGSCA
Trigger: TGCACAACTACCCAGCTTTCATGATGGAAATGAAGC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGCAACCTCTCGCCTCTaGGGGTCTTCAAAGACATGC +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVATSRL*GSSKTC
Trigger: GCATGTCTTTGAAGACCCTCAGAGGCGAGAGGTTGC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGCATTGGAGTAGTCGATaGCAGACCCCATGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLHWSSR*QTPCLG
Trigger: GCCAAGGCATGGGGTCTGTCATCGACTACTCCAATG...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCCATTGGAGTAGTCGATaGCAGACCCCATGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVHWSSR*QTPCLG
Trigger: GCCAAGGCATGGGGTCTGTCATCGACTACTCCAATG...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGCCTGAATGTGGTCGCTaGGGCCCTCGTGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVAPECGR*GPRGTG
Trigger: ACCAGTACCACGAGGGCCTCAGCGACCACATTCAGG...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAAGCCTTCTCTCAATGTaGATGCACTGCCCAATCAGA +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQASLLSM*MHCPIR
Trigger: TCTGATTGGGCAGTGCATTCACATTGAGAGAAGGCT...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCATGTCTGCCCGGAAGATaGATCTGGAGCATCACTTGC +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSCLPGR*IWSITC
Trigger: GCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACA...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTGATAGGCGAGGATACTaGTTCTGGATAGTAAAATTG +
Preference number: 4 (lower is better)
Translates to: LGPMLWGAHQLLPQVLASDRRGY*FWIVKL
Trigger: CAATTTTACTATCCAGAATCAGTATCCTCGCCTATC...ACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGTGCCTCAGGTGGCCTaGAGATACAGTAGCCTAAAA +
Preference number: 4 (lower is better)
Translates to: GRMETESHQMTAPLGDLPVPQVA*RYSSLK
Trigger: TTTTAGGCTACTGTATCTTCAGGCCACCTGAGGCAC...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTATGCAAGAGTCCATCTaGGAGAGCACTTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECMQESI*ESTFFS
Trigger: TGAAAAGAAAGTGCTCTCTCAGATGGACTCTTGCAT...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGCCCTCAAAGGTGATTaGGAGGTGGTCACATTTCAT +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAALKGD*EVVTFH
Trigger: ATGAAATGTGACCACCTCTCAATCACCTTTGAGGGC...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTTTAGCCCTCAAAGGTaGTTGAGAGGTGGTCACATT +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGFSPQR*LRGGHI
Trigger: AATGTGACCACCTCTCAATCACCTTTGAGGGCTAAA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAATGGAGTTCAATGGAAGTTTTTaGAAGCCTAGTCACCACTTC +
Preference number: 4 (lower is better)
Translates to: WDHVCSASEPLGRQGRMEFNGSF*KPSHHF
Trigger: GAAGTGGTGACTAGGCTTTCAAAAACTTCCATTGAA...CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCGGGGCGCCCATCAATTaGTTCCACAAGTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTGAPIN*FHKYWP
Trigger: TGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCC...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGTTGTTCTCCTCCGACTaGTTCATGACCTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLLFSSD*FMTFSL
Trigger: AAGAGAGAAGGTCATGAAGCAGTCGGAGGAGAACAA...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCACCAGCATGTCTGGGTTaGCATCGAACTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSPACLG*HRTSLG
Trigger: TCCCAGAGAAGTTCGATGGCAACCCAGACATGCTGG...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCCACGGCCGGTCATCATaGTTGTCACGAAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVHGRSS*LSRSRH
Trigger: GTGTCTGCTTCGTGACAAGCATGATGACCGGCCGTG...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGTACCTGGTGGTGGCTTaGAATGTGAGGCAACACCAG +
Preference number: 4 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVYLVVA*NVRQHQ
Trigger: CTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTA...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCACGAACAGGGTGTGTCTaGCCGGAAGATGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSRTGCV*PEDESG
Trigger: TCCAGATTCATCTTCCGGGCAGACACACCCTGTTCG...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGAGTTTCAGAGAGGATGTaGCTCAGGTGGCCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGVSERM*LRWPED
Trigger: ATCTTCAGGCCACCTGAGGCACATCCTCTCTGAAAC...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCGAAATCAGCATTTCCTaGGTTTGTATCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WARCYGAPINCFHKYWPVEISIS*VCISFS
Trigger: AGAGAAGCTGATACAAACGCAGGAAATGCTGATTTC...GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGAAGCCTTTCCACACTaGACCGATAATTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGEAFPH*TDNFGF
Trigger: GAAGCCAAAATTATCGGTGCAGTGTGGAAAGGCTTC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTAACCAGTCGAGTTGCTaGTCCTTGAGAATTAACAGA +
Preference number: 4 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECNQSSC*SLRINR
Trigger: TCTGTTAATTCTCAAGGAGCAGCAACTCGACTGGTT...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGACTCCAGACTTTTGCTTaGAGTGGTGGCAAATGTCCG +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGLQTFA*SGGKCP
Trigger: CGGACATTTGCCACCACTGCAAGCAAAAGTCTGGAG...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCGAGCATAGTACACACTaGCAAAAAGTTAATCACAAG +
Preference number: 4 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPEHSTH*QKVNHK
Trigger: CTTGTGATTAACTTTTTGGCAGTGTGTACTATGCTC...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTAGTTTCGTGGACAACTaGGCCCGATGCTATGGGGCG +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFSFVDN*ARCYGA
Trigger: CGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACT...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTGGCGGTTGTGGTGCTaGTGGTGGGAGCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSWRLWC*WWERWW
Trigger: CCACCATCGCTCCCACCACCAGCACCACAACCGCCA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGGTGAGATGTCTGTGGTaGATGACAACTGGATCAATT +
Preference number: 4 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKVRCLW*MTTGSI
Trigger: AATTGATCCAGTTGTCATCCACCACAGACATCTCAC...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCAACACACGCACTCTTATaGCCGGTGTGCTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSTHALL*PVCLEL
Trigger: CAACTCCAAGCACACCGGCCATAAGAGTGCGTGTGT...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAATTCGTTCGGTCATGTTaGGGACACACGCACTCTTAT +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQFVRSC*GHTHSY
Trigger: ATAAGAGTGCGTGTGTCCCCAACATGACCGAACGAA...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCCCTCATCCTCAGGGGTaGGTTCCACTTGCTCTCGAA +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVPHPQG*VPLALE
Trigger: TTCGAGAGCAAGTGGAACCCACCCCTGAGGATGAGG...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGCACTCTTCCTCTATTaGAGGGGGTGGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTALFLY*RGWGSS
Trigger: GCTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGCCATCGAACTTCTCTaGGAGGTCTTCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLAIELL*EVFWAL
Trigger: GAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGC...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGAGGAGCCAGCATGTCTaGGTTGCCATCGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVRSQHV*VAIELL
Trigger: GAGAAGTTCGATGGCAACCCAGACATGCTGGCTCCT...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGTTCCATCATGAAAGCTaGGTAGTTGTGCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKFHHES*VVVHQV
Trigger: TACCTGATGCACAACTACCCAGCTTTCATGATGGAA...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTACAGACCCCATGCCTTaGCGCAGGCGTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFTDPMP*RRRLIL
Trigger: CAAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGT...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTTCCAATCCAGGTCCTaGGCAATCATCTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQFQSRS*AIIWKA
Trigger: TGCTTTCCAGATGATTGCCCAGGACCTGGATTGGAA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CGGCATATGTGGGGTATGTTTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTTCGCTGAGGCCCTCGTaGTACTGGTCAATCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RHMWGMFGIQVFEVRIQCSLRPS*YWSISA
Trigger: TGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGA...ACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAGACGTGCTCATCTACTaGAGTGTACACATTCTGGAC +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQDVLIY*SVHILD
Trigger: GTCCAGAATGTGTACACTCCAGTAGATGAGCACGTC...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCAACCAGGCGGTGATCTaGGTAGACGTGCTCATCTAC +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTNQAVI*VDVLIY
Trigger: GTAGATGAGCACGTCTACCCAGATCACCGCCTGGTT...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAATTCACCTGGAGAACTTaGGCTCCATTAGGTGCAATC +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQFTWRT*APLGAI
Trigger: GATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAA...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTTCACCTGGAGAACTTaGGCTCCATTAGGTGCAATC +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQFTWRT*APLGAI
Trigger: GATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTCCGTCTCGTCCCACTaGGTACCAGGCGAATCCTAC +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLSVSSH*VPGESY
Trigger: GTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTACAGAACCATGGAAATaGAGTTTGAAGACGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECTEPWK*SLKTVK
Trigger: CTTCACCGTCTTCAAACTCCATTTCCATGGTTCTGT...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGGAATTAACAGAACCATaGAAATGGAGTTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSELTEP*KWSLKT
Trigger: CGTCTTCAAACTCCATTTCCATGGTTCTGTTAATTC...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGATTGTGGAAGCCATCATaGCATGATGATGGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRLWKPS*HDDGKV
Trigger: CACCTTACCATCATCATGCCATGATGGCTTCCACAA...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp ACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCGCCACCAGTAATCTCTaGTTACCAGGTTTAATGCTT +
Preference number: 4 (lower is better)
Translates to: TTGPDAMGRPSIASTSIGATSNL*LPGLML
Trigger: AAGCATTAAACCTGGTAACCAGAGATTACTGGTGGC...GCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACATTCCAAAACGTCAGCTaGTGCTTTTCCAGCCAATTA +
Preference number: 4 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTFQNVS*CFSSQL
Trigger: TAATTGGCTGGAAAAGCACCAGCTGACGTTTTGGAA...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGAGGCTTTTCATCCATTaGCAGCTTCACATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQRLFIH*QLHISS
Trigger: GGAGCTGATGTGAAGCTGCCAATGGATGAAAAGCCT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACATCAGAGGTGTCACTaGGCTGAAGACAACTCTTGT +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQHQRCH*AEDNSC
Trigger: ACAAGAGTTGTCTTCAGCCCAGTGACACCTCTGATG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGCTCAAACTGTGCTTTaGCAATTAAAGCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGAQTVL*QLKPAS
Trigger: AGAGGCAGGCTTTAATTGCCAAAGCACAGTTTGAGC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp GAATCAAAGACGATAGATCGAGTGCTCCATGTGATATaGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGG +
Preference number: 4 (lower is better)
Translates to: ESKTIDRVLHVI*GSCVLSQRTPR
Trigger: CCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTGACAGCACCTCTCGGTaGTCTCCCAGGTCAACTATC +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFDSTSR*SPRSTI
Trigger: GATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTC...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAATCGAGTGCTCCATGTaGTATTGGGATCATGTGTGC +
Preference number: 4 (lower is better)
Translates to: GRMETESHQMTAPLGDLPIECSM*YWDHVC
Trigger: GCACACATGATCCCAATATCACATGGAGCACTCGAT...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGATGTCTGTGGTGGATaGCAACTGGATCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQDVCGG*QLDQFR
Trigger: TCTGAATTGATCCAGTTGTCATCCACCACAGACATC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGAACTGTCTGTATCTaGTGTGAGATGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRMETESHQMTAPLGDLPGTVCI*CEMSVV
Trigger: CACCACAGACATCTCACATCAGATACAGACAGTTCC...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGATGGTGTTCTCCTCTGTaGGCTTCTGCACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RQYSESKTIDRVLHVILGWCSPL*ASAPGS
Trigger: AGAGCCAGGTGCAGAAGCTCACAGAGGAGAACACCA...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTGGTGCTCTTTTCCATaGAGATCTGGCACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVWCSFP*RSGTGP
Trigger: TGGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAGCGCTCCAGCTTTGCTaGGGCCCAACGGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLALQLC*GPTGST
Trigger: CGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGC...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGAGCAACCTCTCGCCTCTaGGGGTCTTCAAAGACATGC +
Preference number: 4 (lower is better)
Translates to: RQYSESKTIDRVLHVILGATSRL*GSSKTC
Trigger: GCATGTCTTTGAAGACCCTCAGAGGCGAGAGGTTGC...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGCAACCTCTCGCCTCTaGGGGTCTTCAAAGACATGC +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLATSRL*GSSKTC
Trigger: GCATGTCTTTGAAGACCCTCAGAGGCGAGAGGTTGC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCCTGAATGTGGTCGCTaGGGCCCTCGTGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSPECGR*GPRGTG
Trigger: ACCAGTACCACGAGGGCCTCAGCGACCACATTCAGG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTTGTCTGCCCGGAAGATaGATCTGGAGCATCACTTGC +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASCLPGR*IWSITC
Trigger: GCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACA...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTGTCTGCCCGGAAGATaGATCTGGAGCATCACTTGC +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVCLPGR*IWSITC
Trigger: GCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACATATTCGTGATCAATaGAGTTGCCAGAAGCACCAG +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQHIRDQ*SCQKHQ
Trigger: CTGGTGCTTCTGGCAACTTCATTGATCACGAATATG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCTTCAGGTTCGGACAGTaGATACACATGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTFRFGQ*IHMSTG
Trigger: CCCAGTGGACATGTGTATTCACTGTCCGAACCTGAA...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATAGTGTGGATTCCAAGTaGTCATCACAGGTACATATA +
Preference number: 4 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDSVDSK*SSQVHI
Trigger: TATATGTACCTGTGATGATCACTTGGAATCCACACT...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGAGCCTCAGTCCTCCAGTaGTTTAAAAAGAGGGTACCG +
Preference number: 4 (lower is better)
Translates to: MGRPSIASTSIGQSLILRASVLQ*FKKRVP
Trigger: CGGTACCCTCTTTTTAAATCACTGGAGGACTGAGGC...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATGCAAGAGTCCATCTaGGAGAGCACTTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGMQESI*ESTFFS
Trigger: TGAAAAGAAAGTGCTCTCTCAGATGGACTCTTGCAT...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCAGAGGTGTCACTGGGCTaGAGACAACTCTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSEVSLG*RQLLCC
Trigger: ACAACACAAGAGTTGTCTTCAGCCCAGTGACACCTC...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGAGGATCAGGGACTTTCTaGGTTGTTAACCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: MGRPSIASTSIGQSLILRGSGTF*VVNPQQ
Trigger: CTGCTGTGGGTTAACAACTCAGAAAGTCCCTGATCC...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCGGATCAGGGACTTTCTaGGTTGTTAACCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTGSGTF*VVNPQQ
Trigger: CTGCTGTGGGTTAACAACTCAGAAAGTCCCTGATCC...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAGCGTGGCTTGCGAGCTaGAGCAGCCCTGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLAWLAS*SSPGQP
Trigger: AGGCTGGCCAGGGCTGCTGCAGCTCGCAAGCCACGC...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAAAAATCTCGAAGAGCTaGCATTTCAGGTTCGGACAG +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQKISKS*HFRFGQ
Trigger: CTGTCCGAACCTGAAATGGCAGCTCTTCGAGATTTT...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAACCAGTCGAGTTGCTaGTCCTTGAGAATTAACAGA +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGNQSSC*SLRINR
Trigger: TCTGTTAATTCTCAAGGAGCAGCAACTCGACTGGTT...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAGATGAAATGCCCAGATaGATATGGAGGCAGACACAT +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQDEMPR*IWRQTH
Trigger: ATGTGTCTGCCTCCATATGCATCTGGGCATTTCATC...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGTTGAGTCCTTTGAGTTaGTTTCTGAGGCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKLSPLS*FLRLFI
Trigger: GATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAA...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACATTGGCAATTAAAGCCTaGCTCTTACATCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTLAIKA*LLHLCV
Trigger: CACACAGAGATGTAAGAGGCAGGCTTTAATTGCCAA...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTTGGCAATTAAAGCCTaGCTCTTACATCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGLAIKA*LLHLCV
Trigger: CACACAGAGATGTAAGAGGCAGGCTTTAATTGCCAA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTATGTCCGTGTGCACATaGCAGGGCTACAGACAACGG +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFMSVCT*QGYRQR
Trigger: CCGTTGTCTGTAGCCCTGGCATGTGCACACGGACAT...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAACTTCTCCAGACTTTTaGTTGCAGTGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQTSPDF*LQWWQM
Trigger: CATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGT...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGTTTCGCCAGGCTCGGTaGACCTTCTCCGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVAFRQAR*TFSAVL
Trigger: GAGAACAGCGGAGAAGGTCCACCGAGCCTGGCGAAA...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000488574.5
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGGGAGGAGGAGGAGGTaGGCAGTCGGGACCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFGRRRR*AVGTQG
Trigger: ACCCTGGGTCCCGACTGCCCACCTCCTCCTCCTCCC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGTGAGCTTCTGCACCTaGCTCTGCAGGTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASVSFCT*LCRLLF
Trigger: GAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCAC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTCCTCATCCTCAGGGGTaGGTTCCACTTGCTCTCGAA +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFPHPQG*VPLALE
Trigger: TTCGAGAGCAAGTGGAACCCACCCCTGAGGATGAGG...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGCCATCGAACTTCTCTaGGAGGTCTTCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLAIELL*EVFWAL
Trigger: GAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGAGCAGACAGCGACTTaGCGACCTCGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSEQTAT*RPRGGR
Trigger: TCTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTCCCACCGGCTCGGTTaGATCTACCTGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSSHRLG*IYLVVA
Trigger: AGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTCACCAGAATCGATCATaGCTCGGACGAACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASHQNRS*LGRTGC
Trigger: ACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTG...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCCACCAGAATCGATCATaGCTCGGACGAACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVHQNRS*LGRTGC
Trigger: ACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTG...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAAATACACATGTCCACTaGGAATACTGTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQNTHVH*EYCVLQ
Trigger: CTGGAGCACACAGTATTCCCAGTGGACATGTGTATT...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGACAGAACCATGGAAATaGAGTTTGAAGACGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLTEPWK*SLKTVK
Trigger: CTTCACCGTCTTCAAACTCCATTTCCATGGTTCTGT...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGGTTTTTCCTGCTCCTaGGAGAACCAGTCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFGFSCS*ENQSSC
Trigger: GCAACTCGACTGGTTCTCCCAGGAGCAGGAAAAACC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTTGTGGAAGCCATCATaGCATGATGATGGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQLWKPS*HDDGKV
Trigger: CACCTTACCATCATCATGCCATGATGGCTTCCACAA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCAGGCTTTTCATCCATTaGCAGCTTCACATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGRLFIH*QLHISS
Trigger: GGAGCTGATGTGAAGCTGCCAATGGATGAAAAGCCT...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCTTACATCTCTGTGTGTaGCAGCAAAATGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGLHLCV*QQNGVS
Trigger: TGAGACTCCATTTTGCTGCCACACACAGAGATGTAA...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCGACTTTTGCTTGCAGTaGTGGCAAATGTCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTDFCLQ*WQMSVC
Trigger: GCACACGGACATTTGCCACCACTGCAAGCAAAAGTC...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGTAAACAGCCAAATGTaGATCAGGGACTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGVNSQM*IRDFLS
Trigger: ACTCAGAAAGTCCCTGATCCACATTTGGCTGTTTAC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp TGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTaGGTATCCAGGTATTTGAGGTACGAATTCAGTGTA +
Preference number: 4 (lower is better)
Translates to: WVGRVRGICGVC*VSRYLRYEFSV
Trigger: TACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCGCGTACCCGACCTACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CAA 72 bp GGATCACGGAAGCCTTTCCACACTGCACCGATAATTTaGGCTTCCTTAATAAGGCCTCAGTCCTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: GSRKPFHTAPII*ASLIRPQSSSD
Trigger: ATCACTGGAGGACTGAGGCCTTATTAAGGAAGCCAAAATTATCGGTGCAGTGTGGAAAGGCTTCCGTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGCTGAGTCACATCAAATaGCAGCACCTCTCGGTGATC +
Preference number: 4 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLLSHIK*QHLSVI
Trigger: GATCACCGAGAGGTGCTGTCATTTGATGTGACTCAG...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCTGAGTCACATCAAATaGCAGCACCTCTCGGTGATC +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFLSHIK*QHLSVI
Trigger: GATCACCGAGAGGTGCTGTCATTTGATGTGACTCAG...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGGAAGAATGGAGACTaGGTCACATCAAATGACAGC +
Preference number: 4 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVGKNGD*VTSNDS
Trigger: GCTGTCATTTGATGTGACTCAGTCTCCATTCTTCCC...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTGGTGCTCTTTTCCATaGAGATCTGGCACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLWCSFP*RSGTGP
Trigger: TGGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCACGGACACGATCAACTaGGAAATCCCTGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVTDTIN*EIPGAL
Trigger: AAGAGCACCAGGGATTTCTCAGTTGATCGTGTCCGT...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATCTTGGCGCAGGCGTCTaGTCTTGCGTTTGGCAACCT +
Preference number: 4 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDLGAGV*SCVWQP
Trigger: AGGTTGCCAAACGCAAGATCAGACGCCTGCGCCAAG...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTCATTGGAGTAGTCGATaGCAGACCCCATGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTHWSSR*QTPCLG
Trigger: GCCAAGGCATGGGGTCTGTCATCGACTACTCCAATG...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTTCTGGCCCGGTCGCTaGAGGTCCCTCTACAGCGGG +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFFWPGR*RSLYSG
Trigger: CCCGCTGTAGAGGGACCTTCAGCGACCGGGCCAGAA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGATAGGCGAGGATACTaGTTCTGGATAGTAAAATTG +
Preference number: 4 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTDRRGY*FWIVKL
Trigger: CAATTTTACTATCCAGAATCAGTATCCTCGCCTATC...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGATAGGCGAGGATACTaGTTCTGGATAGTAAAATTG +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGDRRGY*FWIVKL
Trigger: CAATTTTACTATCCAGAATCAGTATCCTCGCCTATC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATGGTATCCAGGTATTTaGGGTACGAATTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAWYPGI*GTNSVY
Trigger: GTACACTGAATTCGTACCTCAAATACCTGGATACCA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAAGTGTGGATTCCAAGTaGTCATCACAGGTACATATA +
Preference number: 4 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTSVDSK*SSQVHI
Trigger: TATATGTACCTGTGATGATCACTTGGAATCCACACT...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGCCTCAGTCCTCCAGTaGTTTAAAAAGAGGGTACCG +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVASVLQ*FKKRVP
Trigger: CGGTACCCTCTTTTTAAATCACTGGAGGACTGAGGC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAGATGCTGATGAAAAGTaGAACTTCACCGTTAGACTC +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQDADEK*NFTVRL
Trigger: GAGTCTAACGGTGAAGTTTCACTTTTCATCAGCATC...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTCAAATGCTCCAGTTCTaGGGAGCCTCTCATTCACAG +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASQMLQF*GASHSQ
Trigger: CTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTG...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGGGATCAGGGACTTTCTaGGTTGTTAACCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSGSGTF*VVNPQQ
Trigger: CTGCTGTGGGTTAACAACTCAGAAAGTCCCTGATCC...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGGGGCGCCCATCAATTaGTTCCACAAGTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLGAPIN*FHKYWP
Trigger: TGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTATTGGGATCATGTGTaGTCAGCCAGCGAACCCCTA +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVYWDHV*SASEPL
Trigger: TAGGGGTTCGCTGGCTGAGCACACATGATCCCAATA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGTATTGGGATCATGTGTaGTCAGCCAGCGAACCCCTA +
Preference number: 4 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLYWDHV*SASEPL
Trigger: TAGGGGTTCGCTGGCTGAGCACACATGATCCCAATA...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTTATTGGGATCATGTGTaGTCAGCCAGCGAACCCCTA +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASYWDHV*SASEPL
Trigger: TAGGGGTTCGCTGGCTGAGCACACATGATCCCAATA...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCATTGTTCTCCTCCGACTaGTTCATGACCTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GRMETESHQMTAPLGDLPLFSSD*FMTFSL
Trigger: AAGAGAGAAGGTCATGAAGCAGTCGGAGGAGAACAA...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTCCAGCATGTCTGGGTTaGCATCGAACTTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFPACLG*HRTSLG
Trigger: TCCCAGAGAAGTTCGATGGCAACCCAGACATGCTGG...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGATTCTCTCAATGTGAATaGACTGCCCAATCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGFSQCE*TAQSEQ
Trigger: CTGCTCTGATTGGGCAGTGCATTCACATTGAGAGAA...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCTTCTCTCAATGTGAATaGACTGCCCAATCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGFSQCE*TAQSEQ
Trigger: CTGCTCTGATTGGGCAGTGCATTCACATTGAGAGAA...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTACCTGGTGGTGGCTTaGAATGTGAGGCAACACCAG +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFYLVVA*NVRQHQ
Trigger: CTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGAATCTGGAGCATCACTTaGAAGTGTGGAGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: MGRPSIASTSIGQSLILRIWSIT*KCGDEA
Trigger: TGCCTCATCTCCACACTTGCAAGTGATGCTCCAGAT...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CGGCATATGTGGGGTATGTTTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTCGAACAGGGTGTGTCTaGCCGGAAGATGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: RHMWGMFGIQVFEVRIQCRTGCV*PEDESG
Trigger: TCCAGATTCATCTTCCGGGCAGACACACCCTGTTCG...ACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCCGAACAGGGTGTGTCTaGCCGGAAGATGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLRTGCV*PEDESG
Trigger: TCCAGATTCATCTTCCGGGCAGACACACCCTGTTCG...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGAATTCAGTGTACGTTaGCAGGTGTGCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVEFSVR*QVCLVF
Trigger: GAAGACCAAGCACACCTGGCAACGTACACTGAATTC...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGTGGCAAATACTCTGTTaGTCTCAGAAAATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWWQILC*SQKMLK
Trigger: CTTCAACATTTTCTGAGAGCAACAGAGTATTTGCCA...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGAAATCAGCATTTCCTaGGTTTGTATCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGEISIS*VCISFS
Trigger: AGAGAAGCTGATACAAACGCAGGAAATGCTGATTTC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGAGAGAACCAGTCGAGTTaGTGCTCCTTGAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGENQSS*CSLRIN
Trigger: GTTAATTCTCAAGGAGCAGCAACTCGACTGGTTCTC...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGGACATAGTCTTAACATaGAAGAGTCCATCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLDIVLT*KSPSER
Trigger: TCTCTCAGATGGACTCTTGCATGTTAAGACTATGTC...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGACATAGTCTTAACATaGAAGAGTCCATCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: PASYISVCGSKMESQQPGDIVLT*KSPSER
Trigger: TCTCTCAGATGGACTCTTGCATGTTAAGACTATGTC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGGAGTCCTTTTGATGTaGTACTCTTTAGCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQGVLLM*YSLALK
Trigger: TTTGAGGGCTAAAGAGTAGCACATCAAAAGGACTCC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTCTTGTGTTGTCCGTTaGTTTGAGTCCTTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQSCVVR*FESFEL
Trigger: CAACTCAAAGGACTCAAAGCAACGGACAACACAAGA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATGAATTATTATACAAATaGTCCAGTTCTGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDELLYK*SSSEEP
Trigger: AGGCTCCTCAGAACTGGAGCATTTGTATAATAATTC...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTATGTCCGTGTGCACATaGCAGGGCTACAGACAACGG +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTMSVCT*QGYRQR
Trigger: CCGTTGTCTGTAGCCCTGGCATGTGCACACGGACAT...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTGGCAAATGTCCGTGTaGACATGCCAGGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFWQMSV*TCQGYR
Trigger: TCTGTAGCCCTGGCATGTGCACACGGACATTTGCCA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCTCCAGACTTTTGCTTaGAGTGGTGGCAAATGTCCG +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFLQTFA*SGGKCP
Trigger: CGGACATTTGCCACCACTGCAAGCAAAAGTCTGGAG...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTAGTTTCGTGGACAACTaGGCCCGATGCTATGGGGCG +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSSFVDN*ARCYGA
Trigger: CGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGAGCGATGGTGGTATTaGAGAATACATCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASERWWY*RIHPAV
Trigger: CACTGCCGGATGTATTCTCCAATACCACCATCGCTC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGTGGTGGATGACAACTaGATCAATTCAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAVVDDN*INSEVQ
Trigger: TTGGACTTCTGAATTGATCCAGTTGTCATCCACCAC...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACACTCTGTTGTCAATCTTaGAACTGTCTGTATCTGATG +
Preference number: 4 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTLCCQS*NCLYLM
Trigger: CATCAGATACAGACAGTTCCAAGATTGACAACAGAG...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGATTCGTTCGGTCATGTTaGGGACACACGCACTCTTAT +
Preference number: 4 (lower is better)
Translates to: MGRPSIASTSIGQSLILRFVRSC*GHTHSY
Trigger: ATAAGAGTGCGTGTGTCCCCAACATGACCGAACGAA...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTGTGAGCTTCTGCACCTaGCTCTGCAGGTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFVSFCT*LCRLLF
Trigger: GAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCAC...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCGCACTCTTCCTCTATTaGAGGGGGTGGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAALFLY*RGWGSS
Trigger: GCTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGC...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTCTCTGGGAGGTCTTCTaGGCACTCTTCCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFLWEVF*ALFLYW
Trigger: CCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAG...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCCACCAGAATCGATCATaGCTCGGACGAACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLHQNRS*LGRTGC
Trigger: ACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTG...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCATTCACCTGGAGAACTTaGGCTCCATTAGGTGCAATC +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSFTWRT*APLGAI
Trigger: GATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAA...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTCACCCCCTCTTCACCTaGAGAACTTGGGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFHPLFT*RTWAPL
Trigger: TAATGGAGCCCAAGTTCTCCAGGTGAAGAGGGGGTG...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTCCGTCTCGTCCCACTaGGTACCAGGCGAATCCTAC +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSSVSSH*VPGESY
Trigger: GTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGCTGGCGGTACCAGTGTaGATTCCAAGTGATCATCAC +
Preference number: 4 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLLAVPV*IPSDHH
Trigger: GTGATGATCACTTGGAATCCACACTGGTACCGCCAG...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTGGCGGCGGGTACTGTaGTACCGGAGGCTGGCGGTA +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFWRRVL*YRRLAV
Trigger: TACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTAGGATGTGCCTCAGGTaGCCTGAAGATACAGTAGCC +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFRMCLR*PEDTVA
Trigger: GGCTACTGTATCTTCAGGCCACCTGAGGCACATCCT...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAATGTTGAAGGTCTTTTaGTGCTTTAGGATGTGTGCC +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAMLKVF*CFRMCA
Trigger: GGCACACATCCTAAAGCACCAAAAGACCTTCAACAT...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCCAGACTTCCAGGACTaGCTGGAAAGTAAACTTATT +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQPDFQD*LESKLI
Trigger: AATAAGTTTACTTTCCAGCCAGTCCTGGAAGTCTGG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCCAAAGCCGGAGTCATTaGGTACATGTGATTTGCACC +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTQSRSH*VHVICT
Trigger: GGTGCAAATCACATGTACCCAATGACTCCGGCTTTG...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACATTGGGTATGGGATTTTaGAGTCCTTTTGATGTGCTA +
Preference number: 4 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTLGMGF*SPFDVL
Trigger: TAGCACATCAAAAGGACTCCAAAATCCCATACCCAA...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATTCCAAAACGTCAGCTaGTGCTTTTCCAGCCAATTA +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAFQNVS*CFSSQL
Trigger: TAATTGGCTGGAAAAGCACCAGCTGACGTTTTGGAA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAATACCATCAAGTAATGTaGAGCTCACTAAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQYHQVM*SSLRKS
Trigger: GGACTTCCTTAGTGAGCTCCACATTACTTGATGGTA...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCAGGCTTTTCATCCATTaGCAGCTTCACATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTRLFIH*QLHISS
Trigger: GGAGCTGATGTGAAGCTGCCAATGGATGAAAAGCCT...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTTGTGTGGCAGCAAAATaGAGTCTCAGCAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASCVAAK*SLSNQA
Trigger: TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACA...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTGTGTGGCAGCAAAATaGAGTCTCAGCAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVCVAAK*SLSNQA
Trigger: TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGACTTTTGCTTGCAGTaGTGGCAAATGTCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFDFCLQ*WQMSVC
Trigger: GCACACGGACATTTGCCACCACTGCAAGCAAAAGTC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTCAACTATCAGGTCGTaGGTTTCGTGGACAACTGGG +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFSTIRS*VSWTTG
Trigger: CCCAGTTGTCCACGAAACTCACGACCTGATAGTTGA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTCAGGAGCGCAGACTGTaGGCCTTATATAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTQERRL*ALYRLH
Trigger: GTGCAACCTATATAAGGCTCACAGTCTGCGCTCCTG...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482108.1
CDS-3UTR TCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCCACACCAACCGAAGTTaGAGCGCGTGTACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAHTNRS*SACTRS
Trigger: GCTCCTGGTACACGCGCTTCAACTTCGGTTGGTGTG...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482108.1
CDS-3UTR TCA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGCCTCCGACTGCTTCATaGCCTTCTCTCTTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSPPTAS*PSLLSC
Trigger: ACAACTTAAGAGAGAAGGTCATGAAGCAGTCGGAGG...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCCTCCGACTGCTTCATaGCCTTCTCTCTTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFPPTAS*PSLLSC
Trigger: ACAACTTAAGAGAGAAGGTCATGAAGCAGTCGGAGG...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGGAATTCCATTTTGAGCAACATATTCGTGATCAATGAAGTTGCCAGAAGCACCTGGTGTTCTCCTCTGTaGGCTTCTGCACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RNSILSNIFVINEVARSTWCSPL*ASAPGS
Trigger: AGAGCCAGGTGCAGAAGCTCACAGAGGAGAACACCA...GGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCGCTTCATTTCCATCATaGAAGCTGGGTAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTASFPS*KLGSCA
Trigger: TGCACAACTACCCAGCTTTCATGATGGAAATGAAGC...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATGCAACCTCTCGCCTCTaGGGGTCTTCAAAGACATGC +
Preference number: 4 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDATSRL*GSSKTC
Trigger: GCATGTCTTTGAAGACCCTCAGAGGCGAGAGGTTGC...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTGGGAGAGCTCCTCCTaGATGTGGTCGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFWESSS*MWSLRP
Trigger: GGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGACATATTCGTGATCAATaGAGTTGCCAGAAGCACCAG +
Preference number: 4 (lower is better)
Translates to: MGRPSIASTSIGQSLILRHIRDQ*SCQKHQ
Trigger: CTGGTGCTTCTGGCAACTTCATTGATCACGAATATG...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAAGTGTGGATTCCAAGTaGTCATCACAGGTACATATA +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQASVDSK*SSQVHI
Trigger: TATATGTACCTGTGATGATCACTTGGAATCCACACT...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGCGAGTTGCTGCTCCTTaGGAATTAACAGAACCATGG +
Preference number: 4 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSRVAAP*ELTEPW
Trigger: CCATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCG...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCGAGTTGCTGCTCCTTaGGAATTAACAGAACCATGG +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFRVAAP*ELTEPW
Trigger: CCATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCG...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGAATGCAAGAGTCCATCTaGGAGAGCACTTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGMQESI*ESTFFS
Trigger: TGAAAAGAAAGTGCTCTCTCAGATGGACTCTTGCAT...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTCCAGGCATAGGAGTGTaGATCTGGGTGCTAAATCAT +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASPGIGV*IWVLNH
Trigger: ATGATTTAGCACCCAGATTCACACTCCTATGCCTGG...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGAGAGGTGTCACTGGGCTaGAGACAACTCTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: RQYSESKTIDRVLHVILGEVSLG*RQLLCC
Trigger: ACAACACAAGAGTTGTCTTCAGCCCAGTGACACCTC...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTTCAATGGAAGTTTTTaGAAGCCTAGTCACCACTTC +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQFNGSF*KPSHHF
Trigger: GAAGTGGTGACTAGGCTTTCAAAAACTTCCATTGAA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAATTCAATGGAAGTTTTTaGAAGCCTAGTCACCACTTC +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQFNGSF*KPSHHF
Trigger: GAAGTGGTGACTAGGCTTTCAAAAACTTCCATTGAA...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATTCAATGGAAGTTTTTaGAAGCCTAGTCACCACTTC +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAFNGSF*KPSHHF
Trigger: GAAGTGGTGACTAGGCTTTCAAAAACTTCCATTGAA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCAGGCACCCTGCAGCTTaGAGATCAATTGACAACTGT +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVRHPAA*RSIDNC
Trigger: ACAGTTGTCAATTGATCTTCAAGCTGCAGGGTGCCT...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGGATCAGGGACTTTCTaGGTTGTTAACCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLGSGTF*VVNPQQ
Trigger: CTGCTGTGGGTTAACAACTCAGAAAGTCCCTGATCC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATCTTATTTTGTGCACCTaGAAGTTCACTGTATTACTT +
Preference number: 4 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDLILCT*KFTVLL
Trigger: AAGTAATACAGTGAACTTGCAGGTGCACAAAATAAG...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATTCCTCTGTGAGCTTCTaGACCTGGCTCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDSSVSF*TWLCRL
Trigger: CAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGA...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGTTCTCTCAATGTGAATaGACTGCCCAATCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVFSQCE*TAQSEQ
Trigger: CTGCTCTGATTGGGCAGTGCATTCACATTGAGAGAA...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCTTCTCTCAATGTGAATaGACTGCCCAATCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTFSQCE*TAQSEQ
Trigger: CTGCTCTGATTGGGCAGTGCATTCACATTGAGAGAA...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTATCTGGAGCATCACTTaGAAGTGTGGAGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASIWSIT*KCGDEA
Trigger: TGCCTCATCTCCACACTTGCAAGTGATGCTCCAGAT...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTATCTGGAGCATCACTTaGAAGTGTGGAGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFIWSIT*KCGDEA
Trigger: TGCCTCATCTCCACACTTGCAAGTGATGCTCCAGAT...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAACTGGGAATACTGTGTaGTCCAGGTATCATTTCTAT +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQATGNTV*SRYHFY
Trigger: ATAGAAATGATACCTGGAGCACACAGTATTCCCAGT...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAACTGGGAATACTGTGTaGTCCAGGTATCATTTCTAT +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQTGNTV*SRYHFY
Trigger: ATAGAAATGATACCTGGAGCACACAGTATTCCCAGT...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGACTGGGAATACTGTGTaGTCCAGGTATCATTTCTAT +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQTGNTV*SRYHFY
Trigger: ATAGAAATGATACCTGGAGCACACAGTATTCCCAGT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGGACTGAAGATGAAATaGCCAGATGCATATGGAGGC +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASGLKMK*PDAYGG
Trigger: GCCTCCATATGCATCTGGGCATTTCATCTTCAGTCC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAATTGAGTCCTTTGAGTTaGTTTCTGAGGCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQLSPLS*FLRLFI
Trigger: GATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAA...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTATGTCCGTGTGCACATaGCAGGGCTACAGACAACGG +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSMSVCT*QGYRQR
Trigger: CCGTTGTCTGTAGCCCTGGCATGTGCACACGGACAT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGAGCGATGGTGGTATTaGAGAATACATCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLERWWY*RIHPAV
Trigger: CACTGCCGGATGTATTCTCCAATACCACCATCGCTC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCTCTGTATCCATCTACTaGATAATAGAGTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGSVSIY*IIEWRL
Trigger: CAACCGCCACTCTATTATCCAGTAGATGGATACAGA...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGTGGTGGATGACAACTaGATCAATTCAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: GRMETESHQMTAPLGDLPVVDDN*INSEVQ
Trigger: TTGGACTTCTGAATTGATCCAGTTGTCATCCACCAC...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCACTCTGTTGTCAATCTTaGAACTGTCTGTATCTGATG +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQALCCQS*NCLYLM
Trigger: CATCAGATACAGACAGTTCCAAGATTGACAACAGAG...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGGAATTCCATTTTGAGCAACATATTCGTGATCAATGAAGTTGCCAGAAGCACCCCTCATCCTCAGGGGTaGGTTCCACTTGCTCTCGAA +
Preference number: 4 (lower is better)
Translates to: RNSILSNIFVINEVARSTPHPQG*VPLALE
Trigger: TTCGAGAGCAAGTGGAACCCACCCCTGAGGATGAGG...GGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTAGGAGCCAGCATGTCTaGGTTGCCATCGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTRSQHV*VAIELL
Trigger: GAGAAGTTCGATGGCAACCCAGACATGCTGGCTCCT...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCACAGACCCCATGCCTTaGCGCAGGCGTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKATDPMP*RRRLIL
Trigger: CAAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGT...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGTTCCAATCCAGGTCCTaGGCAATCATCTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLFQSRS*AIIWKA
Trigger: TGCTTTCCAGATGATTGCCCAGGACCTGGATTGGAA...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATAGTAATACCTCACTaGTTGGTAAACTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRIVIPH*LVNSVS
Trigger: GGATACAGAGTTTACCAACCAGTGAGGTATTACTAT...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CTGATTCTGGATAGTAAAATTGTTTGGAGCTCGGCAATCATAAGAAACTTGCAGTCCGTCTCGTCCCACTaGGTACCAGGCGAATCCTAC +
Preference number: 4 (lower is better)
Translates to: LILDSKIVWSSAIIRNLQSVSSH*VPGESY
Trigger: GTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGA...CTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTAGGATGTGCCTCAGGTaGCCTGAAGATACAGTAGCC +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTRMCLR*PEDTVA
Trigger: GGCTACTGTATCTTCAGGCCACCTGAGGCACATCCT...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCATGTTGAAGGTCTTTTaGTGCTTTAGGATGTGTGCC +
Preference number: 4 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGMLKVF*CFRMCA
Trigger: GGCACACATCCTAAAGCACCAAAAGACCTTCAACAT...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATACCTTTTTCATTACGTaGATTCTGATCCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDTFFIT*ILILLK
Trigger: CTTCAAAAGGATCAGAATCCACGTAATGAAAAAGGT...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGCATCAGAGGTGTCACTaGGCTGAAGACAACTCTTGT +
Preference number: 4 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSHQRCH*AEDNSC
Trigger: ACAAGAGTTGTCTTCAGCCCAGTGACACCTCTGATG...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGATGTGTGGCAGCAAAATaGAGTCTCAGCAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: RQYSESKTIDRVLHVILGCVAAK*SLSNQA
Trigger: TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACA...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
3UTR CAA 72 bp ATCAGAGGTGTCACTGGGCTGAAGACAACTCTTGTGTaGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: IRGVTGLKTTLV*SVALSPLSCFL
Trigger: CAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCCAGTGACACCTCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGATGTCTGTGGTGGATaGCAACTGGATCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVDVCGG*QLDQFR
Trigger: TCTGAATTGATCCAGTTGTCATCCACCACAGACATC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTCCTCCGACTGCTTCATaGCCTTCTCTCTTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFPPTAS*PSLLSC
Trigger: ACAACTTAAGAGAGAAGGTCATGAAGCAGTCGGAGG...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGACGGACACGATCAACTaGGAAATCCCTGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVATDTIN*EIPGAL
Trigger: AAGAGCACCAGGGATTTCTCAGTTGATCGTGTCCGT...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTAGCCTTCTCTCAATGTaGATGCACTGCCCAATCAGA +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFSLLSM*MHCPIR
Trigger: TCTGATTGGGCAGTGCATTCACATTGAGAGAAGGCT...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCTGGTATCCAGGTATTTaGGGTACGAATTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTWYPGI*GTNSVY
Trigger: GTACACTGAATTCGTACCTCAAATACCTGGATACCA...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGTGCCTCAGGTGGCCTaGAGATACAGTAGCCTAAAA +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTVPQVA*RYSSLK
Trigger: TTTTAGGCTACTGTATCTTCAGGCCACCTGAGGCAC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTGCCCTCAAAGGTGATTaGGAGGTGGTCACATTTCAT +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFALKGD*EVVTFH
Trigger: ATGAAATGTGACCACCTCTCAATCACCTTTGAGGGC...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTTTTAGCCCTCAAAGGTaGTTGAGAGGTGGTCACATT +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASFSPQR*LRGGHI
Trigger: AATGTGACCACCTCTCAATCACCTTTGAGGGCTAAA...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTCCAGGCATAGGAGTGTaGATCTGGGTGCTAAATCAT +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFPGIGV*IWVLNH
Trigger: ATGATTTAGCACCCAGATTCACACTCCTATGCCTGG...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTAACCAGGCAGGAAAATaGCACAAATCCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTNQAGK*HKSCSR
Trigger: CCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTT...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGACGTTCTTGTCGTTGGTaGACTTCTCCAGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: RQYSESKTIDRVLHVILGRSCRW*TSPDFC
Trigger: GCAAAAGTCTGGAGAAGTTCACCAACGACAAGAACG...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATTTACCATCCATCATTaGCAAGTTCATTCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAFTIHH*QVHSSS
Trigger: ACTGCTAGAATGAACTTGTCAATGATGGATGGTAAA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AGGAATTCCATTTTGAGCAACATATTCGTGATCAATGAAGTTGCCAGAAGCACCGGGGCGCCCATCAATTaGTTCCACAAGTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: RNSILSNIFVINEVARSTGAPIN*FHKYWP
Trigger: TGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCC...GGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACAGTCTCATCAGATGTaGATTCTCTCTTTAGATGAA +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQQSHQM*ILSLDE
Trigger: TTCATCTAAAGAGAGAATGCACATCTGATGAGACTG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATTTCTGCACCTGGCTCTaGAGGTTGTTGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDFCTWL*RLLFSS
Trigger: GGAGGAGAACAACAACCTGCAGAGCCAGGTGCAGAA...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCTTTCTTTTTCTTCCTaGGTCAGGCGCATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSLSFSS*VRRMRA
Trigger: TGCCCGCATGCGCCTGACGCAGGAAGAAAAAGAAAG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTAAAATCTCGAAGAGCTaGCATTTCAGGTTCGGACAG +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASKISKS*HFRFGQ
Trigger: CTGTCCGAACCTGAAATGGCAGCTCTTCGAGATTTT...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGAATTCAGTGTACGTTaGCAGGTGTGCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLEFSVR*QVCLVF
Trigger: GAAGACCAAGCACACCTGGCAACGTACACTGAATTC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATGGCAAATACTCTGTTaGTCTCAGAAAATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAWQILC*SQKMLK
Trigger: CTTCAACATTTTCTGAGAGCAACAGAGTATTTGCCA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCAGGAGTCCTTTTGATGTaGTACTCTTTAGCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSGVLLM*YSLALK
Trigger: TTTGAGGGCTAAAGAGTAGCACATCAAAAGGACTCC...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGATGAAATGCCCAGATaGATATGGAGGCAGACACAT +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVDEMPR*IWRQTH
Trigger: ATGTGTCTGCCTCCATATGCATCTGGGCATTTCATC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCTCTTGTGTTGTCCGTTaGTTTGAGTCCTTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTSCVVR*FESFEL
Trigger: CAACTCAAAGGACTCAAAGCAACGGACAACACAAGA...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTACTTCTCCAGACTTTTaGTTGCAGTGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFTSPDF*LQWWQM
Trigger: CATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGT...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTATAAGTTGGTCTCCCTaGAGTTCCCTCCGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFISWSP*SSLRVY
Trigger: ATAAACTCGGAGGGAACTGCAGGGAGACCAACTTAT...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGATGTGAGATGTCTGTaGTGGATGACAACTGGATCA +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVDVRCL*WMTTGS
Trigger: TGATCCAGTTGTCATCCACCACAGACATCTCACATC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGCACTCTTCCTCTATTaGAGGGGGTGGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFALFLY*RGWGSS
Trigger: GCTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGGAATTCCATTTTGAGCAACATATTCGTGATCAATGAAGTTGCCAGAAGCACCATGAAGATCTGGCACTaGGCCATGAAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RNSILSNIFVINEVARSTMKIWH*AMKGAS
Trigger: GCTGGCTCCTTTCATGGCCCAGTGCCAGATCTTCAT...GGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTATGAAGATCTGGCACTaGGCCATGAAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSMKIWH*AMKGAS
Trigger: GCTGGCTCCTTTCATGGCCCAGTGCCAGATCTTCAT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAAGGCCCTCGTGGTACTaGTCAATCAGCGCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLRPSWY*SISAGS
Trigger: CGAGCCTGCGCTGATTGACCAGTACCACGAGGGCCT...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGATAGTAATACCTCACTaGTTGGTAAACTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQIVIPH*LVNSVS
Trigger: GGATACAGAGTTTACCAACCAGTGAGGTATTACTAT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAATAGTAATACCTCACTaGTTGGTAAACTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAIVIPH*LVNSVS
Trigger: GGATACAGAGTTTACCAACCAGTGAGGTATTACTAT...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGACGTGCTCATCTACTaGAGTGTACACATTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLDVLIY*SVHILD
Trigger: GTCCAGAATGTGTACACTCCAGTAGATGAGCACGTC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCAATACACATGTCCACTaGGAATACTGTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVNTHVH*EYCVLQ
Trigger: CTGGAGCACACAGTATTCCCAGTGGACATGTGTATT...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTTCACCTGGAGAACTTaGGCTCCATTAGGTGCAATC +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLFTWRT*APLGAI
Trigger: GATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGGAATTCCATTTTGAGCAACATATTCGTGATCAATGAAGTTGCCAGAAGCACCCACCCCCTCTTCACCTaGAGAACTTGGGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: RNSILSNIFVINEVARSTHPLFT*RTWAPL
Trigger: TAATGGAGCCCAAGTTCTCCAGGTGAAGAGGGGGTG...GGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGGATAGTAAAATTGTTTaGAGCTCGGCAATCATAAGA +
Preference number: 4 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLDSKIV*SSAIIR
Trigger: TCTTATGATTGCCGAGCTCCAAACAATTTTACTATC...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCACAGAACCATGGAAATaGAGTTTGAAGACGGTGAAG +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTTEPWK*SLKTVK
Trigger: CTTCACCGTCTTCAAACTCCATTTCCATGGTTCTGT...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGTACCATCAAGTAATGTaGAGCTCACTAAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVYHQVM*SSLRKS
Trigger: GGACTTCCTTAGTGAGCTCCACATTACTTGATGGTA...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACTGATCCTTTTGAAGTaGTTACCATCAAGTAATGTG +
Preference number: 4 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQLILLK*LPSSNV
Trigger: CACATTACTTGATGGTAACCACTTCAAAAGGATCAG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCTTACATCTCTGTGTGTaGCAGCAAAATGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTLHLCV*QQNGVS
Trigger: TGAGACTCCATTTTGCTGCCACACACAGAGATGTAA...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp TTGTGGAAGCCATCATGGCATGATGATGGTAAGGTGTaGTGTCAAAGCCGGAGTCATTGGGTACATGTGATT +
Preference number: 4 (lower is better)
Translates to: LWKPSWHDDGKV*CQSRSHWVHVI
Trigger: AATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATCATCATGCCATGATGGCTTCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp ACTGGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTaGAGTCCTTTGAGTTGCTTTCTGAGGCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: TGLKTTLVLSVA*SPLSCFLRLFI
Trigger: GATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTCAACTATCAGGTCGTaGGTTTCGTGGACAACTGGG +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSSTIRS*VSWTTG
Trigger: CCCAGTTGTCCACGAAACTCACGACCTGATAGTTGA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGGGAAGAATGGAGACTaGGTCACATCAAATGACAGC +
Preference number: 4 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVAGKNGD*VTSNDS
Trigger: GCTGTCATTTGATGTGACTCAGTCTCCATTCTTCCC...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGGAACTGTCTGTATCTaGTGTGAGATGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTGTVCI*CEMSVV
Trigger: CACCACAGACATCTCACATCAGATACAGACAGTTCC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTCTGGCACTGGGCCATaGAAGGAGCCAGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFSGTGP*KEPACL
Trigger: CAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTACTTGGCGCAGGCGTCTaGTCTTGCGTTTGGCAACCT +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLLGAGV*SCVWQP
Trigger: AGGTTGCCAAACGCAAGATCAGACGCCTGCGCCAAG...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGTGGTATCCAGGTATTTaGGGTACGAATTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLWYPGI*GTNSVY
Trigger: GTACACTGAATTCGTACCTCAAATACCTGGATACCA...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGCCTCAGTCCTCCAGTaGTTTAAAAAGAGGGTACCG +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSASVLQ*FKKRVP
Trigger: CGGTACCCTCTTTTTAAATCACTGGAGGACTGAGGC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTCGAGTTGCTGCTCCTTaGGAATTAACAGAACCATGG +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTRVAAP*ELTEPW
Trigger: CCATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCG...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGAGGTGTCACTGGGCTaGAGACAACTCTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSEVSLG*RQLLCC
Trigger: ACAACACAAGAGTTGTCTTCAGCCCAGTGACACCTC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTAACCAGGCAGGAAAATaGCACAAATCCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSNQAGK*HKSCSR
Trigger: CCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCTCATGTCAGGCAATTTaGGATATACACCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGSCQAI*DIHHVV
Trigger: AACAACATGGTGTATATCTCAAATTGCCTGACATGA...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGATGCTGATGAAAAGTaGAACTTCACCGTTAGACTC +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVDADEK*NFTVRL
Trigger: GAGTCTAACGGTGAAGTTTCACTTTTCATCAGCATC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTACCCCGGCGAAGACTTTaGGGCCTTGGCAGGACAATT +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLPRRRL*GLGRTI
Trigger: AATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGGG...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612941.2
ENST00000617526.4
CDS-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTATTGGGATCATGTGTaGTCAGCCAGCGAACCCCTA +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSYWDHV*SASEPL
Trigger: TAGGGGTTCGCTGGCTGAGCACACATGATCCCAATA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCACTTATTTTGTGCACCTaGAAGTTCACTGTATTACTT +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQALILCT*KFTVLL
Trigger: AAGTAATACAGTGAACTTGCAGGTGCACAAAATAAG...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCTTATTTTGTGCACCTaGAAGTTCACTGTATTACTT +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQLILCT*KFTVLL
Trigger: AAGTAATACAGTGAACTTGCAGGTGCACAAAATAAG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGAAAAATCTCGAAGAGCTaGCATTTCAGGTTCGGACAG +
Preference number: 4 (lower is better)
Translates to: RQYSESKTIDRVLHVILGKISKS*HFRFGQ
Trigger: CTGTCCGAACCTGAAATGGCAGCTCTTCGAGATTTT...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTTTGAAGGTCTTTTGGTaGTTTAGGATGTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASLKVFW*FRMCAS
Trigger: ACTGGCACACATCCTAAAGCACCAAAAGACCTTCAA...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGAGAACCAGTCGAGTTaGTGCTCCTTGAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLENQSS*CSLRIN
Trigger: GTTAATTCTCAAGGAGCAGCAACTCGACTGGTTCTC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGAGACATAGTCTTAACATaGAAGAGTCCATCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: MGRPSIASTSIGQSLILRDIVLT*KSPSER
Trigger: TCTCTCAGATGGACTCTTGCATGTTAAGACTATGTC...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTTCTTGTGTTGTCCGTTaGTTTGAGTCCTTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFSCVVR*FESFEL
Trigger: CAACTCAAAGGACTCAAAGCAACGGACAACACAAGA...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTTGGCAATTAAAGCCTaGCTCTTACATCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVLAIKA*LLHLCV
Trigger: CACACAGAGATGTAAGAGGCAGGCTTTAATTGCCAA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGAATTATTATACAAATaGTCCAGTTCTGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GRMETESHQMTAPLGDLPELLYK*SSSEEP
Trigger: AGGCTCCTCAGAACTGGAGCATTTGTATAATAATTC...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCATAAGTTGGTCTCCCTaGAGTTCCCTCCGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLISWSP*SSLRVY
Trigger: ATAAACTCGGAGGGAACTGCAGGGAGACCAACTTAT...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGTGAGATGTCTGTGGTaGATGACAACTGGATCAATT +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASVRCLW*MTTGSI
Trigger: AATTGATCCAGTTGTCATCCACCACAGACATCTCAC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCAGGAGCCAGCATGTCTaGGTTGCCATCGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKARSQHV*VAIELL
Trigger: GAGAAGTTCGATGGCAACCCAGACATGCTGGCTCCT...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTGATTCTGGATAGTAAAATTGTTTGGAGCTCGGCAATCATAAGAAACTTGCAGCACCCCCTCTTCACCTaGAGAACTTGGGCTCCATTA +
Preference number: 4 (lower is better)
Translates to: LILDSKIVWSSAIIRNLQHPLFT*RTWAPL
Trigger: TAATGGAGCCCAAGTTCTCCAGGTGAAGAGGGGGTG...CTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGGTACGCGGCATATGTaGGGTATGTTTGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSGTRHM*GMFGIQ
Trigger: CTGGATACCAAACATACCCCACATATGCCGCGTACC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTATGTTGAAGGTCTTTTaGTGCTTTAGGATGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFMLKVF*CFRMCA
Trigger: GGCACACATCCTAAAGCACCAAAAGACCTTCAACAT...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAACTTCCAGGACTGGCTaGAAAGTAAACTTATTAATT +
Preference number: 4 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQATSRTG*KVNLLI
Trigger: AATTAATAAGTTTACTTTCCAGCCAGTCCTGGAAGT...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGACTTCCAGGACTGGCTaGAAAGTAAACTTATTAATT +
Preference number: 4 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQTSRTG*KVNLLI
Trigger: AATTAATAAGTTTACTTTCCAGCCAGTCCTGGAAGT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTCCAGACTTCCAGGACTaGCTGGAAAGTAAACTTATT +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASPDFQD*LESKLI
Trigger: AATAAGTTTACTTTCCAGCCAGTCCTGGAAGTCTGG...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGATTGTGGAAGCCATCATaGCATGATGATGGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: RQYSESKTIDRVLHVILGLWKPS*HDDGKV
Trigger: CACCTTACCATCATCATGCCATGATGGCTTCCACAA...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGCCACCAGTAATCTCTaGTTACCAGGTTTAATGCTT +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFATSNL*LPGLML
Trigger: AAGCATTAAACCTGGTAACCAGAGATTACTGGTGGC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTTCCAAAACGTCAGCTaGTGCTTTTCCAGCCAATTA +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVFQNVS*CFSSQL
Trigger: TAATTGGCTGGAAAAGCACCAGCTGACGTTTTGGAA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTACCATCAAGTAATGTaGAGCTCACTAAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVYHQVM*SSLRKS
Trigger: GGACTTCCTTAGTGAGCTCCACATTACTTGATGGTA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGCTCAAACTGTGCTTTaGCAATTAAAGCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLAQTVL*QLKPAS
Trigger: AGAGGCAGGCTTTAATTGCCAAAGCACAGTTTGAGC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTTTTTGCTTGCAGTGGTaGCAAATGTCCGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTFCLQW*QMSVCT
Trigger: TGTGCACACGGACATTTGCCACCACTGCAAGCAAAA...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTAGGCTTGCCTATCAATaGGAGCTCTTAGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFRLAYQ*ELLDLL
Trigger: AAGAAGATCTAAGAGCTCCCATTGATAGGCAAGCCT...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp AACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTaGCTTTCTGAGGCTTTTCATCCATTGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NSCVVRCFESFE*LSEAFHPLAAS
Trigger: TGAAGCTGCCAATGGATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp AAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTaGAGTTGCTTTCTGAGGCTTTTCATCCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: KTTLVLSVALSP*SCFLRLFIHWQ
Trigger: CTGCCAATGGATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGACAGCACCTCTCGGTaGTCTCCCAGGTCAACTATC +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFDSTSR*SPRSTI
Trigger: GATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCCTGAGTCACATCAAATaGCAGCACCTCTCGGTGATC +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKALSHIK*QHLSVI
Trigger: GATCACCGAGAGGTGCTGTCATTTGATGTGACTCAG...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTATCGAGTGCTCCATGTaGTATTGGGATCATGTGTGC +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSIECSM*YWDHVC
Trigger: GCACACATGATCCCAATATCACATGGAGCACTCGAT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGGAACTGTCTGTATCTaGTGTGAGATGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSGTVCI*CEMSVV
Trigger: CACCACAGACATCTCACATCAGATACAGACAGTTCC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCACGGACACGATCAACTaGGAAATCCCTGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKATDTIN*EIPGAL
Trigger: AAGAGCACCAGGGATTTCTCAGTTGATCGTGTCCGT...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGCATATTCGTGATCAATaGAGTTGCCAGAAGCACCAG +
Preference number: 4 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVAHIRDQ*SCQKHQ
Trigger: CTGGTGCTTCTGGCAACTTCATTGATCACGAATATG...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGGATAGGCGAGGATACTaGTTCTGGATAGTAAAATTG +
Preference number: 4 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSDRRGY*FWIVKL
Trigger: CAATTTTACTATCCAGAATCAGTATCCTCGCCTATC...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTAGTGTGGATTCCAAGTaGTCATCACAGGTACATATA +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASSVDSK*SSQVHI
Trigger: TATATGTACCTGTGATGATCACTTGGAATCCACACT...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGCTCTCAGAAAATGTTaGAGGTCTTTTGGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFALRKC*RSFGAL
Trigger: TAAAGCACCAAAAGACCTTCAACATTTTCTGAGAGC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGAGTCAAGGTGGAAAAATaGGAGATCATTTATTGGCAA +
Preference number: 4 (lower is better)
Translates to: MGRPSIASTSIGQSLILRVKVEK*EIIYWQ
Trigger: TTGCCAATAAATGATCTCTCATTTTTCCACCTTGAC...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGTCAAGGTGGAAAAATaGGAGATCATTTATTGGCAA +
Preference number: 4 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVVKVEK*EIIYWQ
Trigger: TTGCCAATAAATGATCTCTCATTTTTCCACCTTGAC...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGGTGGTCACATTTCATaGACATCTAACAACGCTGGA +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTGGHIS*TSNNAG
Trigger: TCCAGCGTTGTTAGATGTTCATGAAATGTGACCACC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATGCCCTCAAAGGTGATTaGGAGGTGGTCACATTTCAT +
Preference number: 4 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDALKGD*EVVTFH
Trigger: ATGAAATGTGACCACCTCTCAATCACCTTTGAGGGC...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCGTTCTTGTCGTTGGTaGACTTCTCCAGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSRSCRW*TSPDFC
Trigger: GCAAAAGTCTGGAGAAGTTCACCAACGACAAGAACG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCCAGTCTCATCAGATGTaGATTCTCTCTTTAGATGAA +
Preference number: 4 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTQSHQM*ILSLDE
Trigger: TTCATCTAAAGAGAGAATGCACATCTGATGAGACTG...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTTTGTTCTCCTCCGACTaGTTCATGACCTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTLFSSD*FMTFSL
Trigger: AAGAGAGAAGGTCATGAAGCAGTCGGAGGAGAACAA...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATCCTCTGTGAGCTTCTaGACCTGGCTCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLSSVSF*TWLCRL
Trigger: CAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTCACGGCCGGTCATCATaGTTGTCACGAAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFHGRSS*LSRSRH
Trigger: GTGTCTGCTTCGTGACAAGCATGATGACCGGCCGTG...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTTGAAGGTCTTTTGGTaGTTTAGGATGTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFLKVFW*FRMCAS
Trigger: ACTGGCACACATCCTAAAGCACCAAAAGACCTTCAA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGGACTGAAGATGAAATaGCCAGATGCATATGGAGGC +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSGLKMK*PDAYGG
Trigger: GCCTCCATATGCATCTGGGCATTTCATCTTCAGTCC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTTGGCAATTAAAGCCTaGCTCTTACATCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFLAIKA*LLHLCV
Trigger: CACACAGAGATGTAAGAGGCAGGCTTTAATTGCCAA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGCATGTTGTTTTCTACTaGTCAAACTGTGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSHVVFY*SNCALA
Trigger: TGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATG...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCATGTTGTTTTCTACTaGTCAAACTGTGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFHVVFY*SNCALA
Trigger: TGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATG...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCCATGTTGTTTTCTACTaGTCAAACTGTGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVHVVFY*SNCALA
Trigger: TGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATG...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCCTCCAGACTTTTGCTTaGAGTGGTGGCAAATGTCCG +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKALQTFA*SGGKCP
Trigger: CGGACATTTGCCACCACTGCAAGCAAAAGTCTGGAG...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTTGTGGTGCTGGTGGTaGGAGCGATGGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFLWCWW*ERWWYW
Trigger: CCAATACCACCATCGCTCCCACCACCAGCACCACAA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATTGTGGTGCTGGTGGTaGGAGCGATGGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLLWCWW*ERWWYW
Trigger: CCAATACCACCATCGCTCCCACCACCAGCACCACAA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTCTGTATCCATCTACTaGATAATAGAGTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFSVSIY*IIEWRL
Trigger: CAACCGCCACTCTATTATCCAGTAGATGGATACAGA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTCTGTATCCATCTACTaGATAATAGAGTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLSVSIY*IIEWRL
Trigger: CAACCGCCACTCTATTATCCAGTAGATGGATACAGA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGGAATTCCATTTTGAGCAACATATTCGTGATCAATGAAGTTGCCAGAAGCACCTTCGTTCGGTCATGTTaGGGACACACGCACTCTTAT +
Preference number: 4 (lower is better)
Translates to: RNSILSNIFVINEVARSTFVRSC*GHTHSY
Trigger: ATAAGAGTGCGTGTGTCCCCAACATGACCGAACGAA...GGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTCCTCATCCTCAGGGGTaGGTTCCACTTGCTCTCGAA +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFPHPQG*VPLALE
Trigger: TTCGAGAGCAAGTGGAACCCACCCCTGAGGATGAGG...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGCCATCGAACTTCTCTaGGAGGTCTTCTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFAIELL*EVFWAL
Trigger: GAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGATAGTAATACCTCACTaGTTGGTAAACTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVIVIPH*LVNSVS
Trigger: GGATACAGAGTTTACCAACCAGTGAGGTATTACTAT...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CTGATTCTGGATAGTAAAATTGTTTGGAGCTCGGCAATCATAAGAAACTTGCAGGGTACGCGGCATATGTaGGGTATGTTTGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: LILDSKIVWSSAIIRNLQGTRHM*GMFGIQ
Trigger: CTGGATACCAAACATACCCCACATATGCCGCGTACC...CTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTCCAGACTTCCAGGACTaGCTGGAAAGTAAACTTATT +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFPDFQD*LESKLI
Trigger: AATAAGTTTACTTTCCAGCCAGTCCTGGAAGTCTGG...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCACAGAACCATGGAAATaGAGTTTGAAGACGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLTEPWK*SLKTVK
Trigger: CTTCACCGTCTTCAAACTCCATTTCCATGGTTCTGT...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATCAAAGCCGGAGTCATTaGGTACATGTGATTTGCACC +
Preference number: 4 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDQSRSH*VHVICT
Trigger: GGTGCAAATCACATGTACCCAATGACTCCGGCTTTG...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCAAAGCCGGAGTCATTaGGTACATGTGATTTGCACC +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSQSRSH*VHVICT
Trigger: GGTGCAAATCACATGTACCCAATGACTCCGGCTTTG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCTTAAGAGTTGGGTATaGGATTTTGGAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFLKSWV*DFGVLL
Trigger: CAAAAGGACTCCAAAATCCCATACCCAACTCTTAAG...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGCTGATCCTTTTGAAGTaGTTACCATCAAGTAATGTG +
Preference number: 4 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVLILLK*LPSSNV
Trigger: CACATTACTTGATGGTAACCACTTCAAAAGGATCAG...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTAGGCTTTTCATCCATTaGCAGCTTCACATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSRLFIH*QLHISS
Trigger: GGAGCTGATGTGAAGCTGCCAATGGATGAAAAGCCT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCATCAGAGGTGTCACTaGGCTGAAGACAACTCTTGT +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSHQRCH*AEDNSC
Trigger: ACAAGAGTTGTCTTCAGCCCAGTGACACCTCTGATG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTTACATCTCTGTGTGTaGCAGCAAAATGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFLHLCV*QQNGVS
Trigger: TGAGACTCCATTTTGCTGCCACACACAGAGATGTAA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGGAATTCCATTTTGAGCAACATATTCGTGATCAATGAAGTTGCCAGAAGCACCTTTTGCTTGCAGTGGTaGCAAATGTCCGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: RNSILSNIFVINEVARSTFCLQW*QMSVCT
Trigger: TGTGCACACGGACATTTGCCACCACTGCAAGCAAAA...GGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGTAAACAGCCAAATGTaGATCAGGGACTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLVNSQM*IRDFLS
Trigger: ACTCAGAAAGTCCCTGATCCACATTTGGCTGTTTAC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCAGGCTTGCCTATCAATaGGAGCTCTTAGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLRLAYQ*ELLDLL
Trigger: AAGAAGATCTAAGAGCTCCCATTGATAGGCAAGCCT...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp TTCCAGACTGCACCATATAGATGTGGCCCTCTTATTTaGTGCACCTGCAAGTTCACTGTATTACTTCACGAT +
Preference number: 4 (lower is better)
Translates to: FQTAPYRCGPLI*CTCKFTVLLHD
Trigger: ATCGTGAAGTAATACAGTGAACTTGCAGGTGCACAAAATAAGAGGGCCACATCTATATGGTGCAGTCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp GGGGTTTTTATCCATGTCCAATTCGCTCTAAATAAGTaGGTCTCCCTGCAGTTCCCTCCGAGTTTATTTGAA +
Preference number: 4 (lower is better)
Translates to: GVFIHVQFALNK*VSLQFPPSLFE
Trigger: TTCAAATAAACTCGGAGGGAACTGCAGGGAGACCAACTTATTTAGAGCGAATTGGACATGGATAAAAACCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTGGTGCTCTTTTCCATaGAGATCTGGCACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFWCSFP*RSGTGP
Trigger: TGGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGTGGTATCCAGGTATTTaGGGTACGAATTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVAWYPGI*GTNSVY
Trigger: GTACACTGAATTCGTACCTCAAATACCTGGATACCA...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR TCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTTGGTATCCAGGTATTTaGGGTACGAATTCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTWYPGI*GTNSVY
Trigger: GTACACTGAATTCGTACCTCAAATACCTGGATACCA...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGTCAAGGTGGAAAAATaGGAGATCATTTATTGGCAA +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFVKVEK*EIIYWQ
Trigger: TTGCCAATAAATGATCTCTCATTTTTCCACCTTGAC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTATGCAAGAGTCCATCTaGGAGAGCACTTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTMQESI*ESTFFS
Trigger: TGAAAAGAAAGTGCTCTCTCAGATGGACTCTTGCAT...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCCCAGGCATAGGAGTGTaGATCTGGGTGCTAAATCAT +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAPGIGV*IWVLNH
Trigger: ATGATTTAGCACCCAGATTCACACTCCTATGCCTGG...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTCATGTCAGGCAATTTaGGATATACACCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVSCQAI*DIHHVV
Trigger: AACAACATGGTGTATATCTCAAATTGCCTGACATGA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTTTTACCATCCATCATTaGCAAGTTCATTCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFFTIHH*QVHSSS
Trigger: ACTGCTAGAATGAACTTGTCAATGATGGATGGTAAA...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGCAGTCTCATCAGATGTaGATTCTCTCTTTAGATGAA +
Preference number: 4 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSQSHQM*ILSLDE
Trigger: TTCATCTAAAGAGAGAATGCACATCTGATGAGACTG...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTTGTTCTCCTCCGACTaGTTCATGACCTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSLFSSD*FMTFSL
Trigger: AAGAGAGAAGGTCATGAAGCAGTCGGAGGAGAACAA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATTCTGCACCTGGCTCTaGAGGTTGTTGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLFCTWL*RLLFSS
Trigger: GGAGGAGAACAACAACCTGCAGAGCCAGGTGCAGAA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTTCTCTCAATGTGAATaGACTGCCCAATCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSFSQCE*TAQSEQ
Trigger: CTGCTCTGATTGGGCAGTGCATTCACATTGAGAGAA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTACTTTCTTTTTCTTCCTaGGTCAGGCGCATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLLSFSS*VRRMRA
Trigger: TGCCCGCATGCGCCTGACGCAGGAAGAAAAAGAAAG...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCACTGGGAATACTGTGTaGTCCAGGTATCATTTCTAT +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLTGNTV*SRYHFY
Trigger: ATAGAAATGATACCTGGAGCACACAGTATTCCCAGT...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CTGATTCTGGATAGTAAAATTGTTTGGAGCTCGGCAATCATAAGAAACTTGCAGGAATTCAGTGTACGTTaGCAGGTGTGCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LILDSKIVWSSAIIRNLQEFSVR*QVCLVF
Trigger: GAAGACCAAGCACACCTGGCAACGTACACTGAATTC...CTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTTGGCAAATACTCTGTTaGTCTCAGAAAATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASWQILC*SQKMLK
Trigger: CTTCAACATTTTCTGAGAGCAACAGAGTATTTGCCA...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGAAATCAGCATTTCCTaGGTTTGTATCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLEISIS*VCISFS
Trigger: AGAGAAGCTGATACAAACGCAGGAAATGCTGATTTC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGAGAACCAGTCGAGTTaGTGCTCCTTGAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSENQSS*CSLRIN
Trigger: GTTAATTCTCAAGGAGCAGCAACTCGACTGGTTCTC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTTGAGTCCTTTGAGTTaGTTTCTGAGGCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLLSPLS*FLRLFI
Trigger: GATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGTCTTGTGTTGTCCGTTaGTTTGAGTCCTTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVASCVVR*FESFEL
Trigger: CAACTCAAAGGACTCAAAGCAACGGACAACACAAGA...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGAATTATTATACAAATaGTCCAGTTCTGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFELLYK*SSSEEP
Trigger: AGGCTCCTCAGAACTGGAGCATTTGTATAATAATTC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGAGCATAGTACACACTaGCAAAAAGTTAATCACAAG +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVEHSTH*QKVNHK
Trigger: CTTGTGATTAACTTTTTGGCAGTGTGTACTATGCTC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGAGCATAGTACACACTaGCAAAAAGTTAATCACAAG +
Preference number: 4 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASEHSTH*QKVNHK
Trigger: CTTGTGATTAACTTTTTGGCAGTGTGTACTATGCTC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGATGTGAGATGTCTGTaGTGGATGACAACTGGATCA +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSDVRCL*WMTTGS
Trigger: TGATCCAGTTGTCATCCACCACAGACATCTCACATC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTACACACGCACTCTTATaGCCGGTGTGCTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFTHALL*PVCLEL
Trigger: CAACTCCAAGCACACCGGCCATAAGAGTGCGTGTGT...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAACACACGCACTCTTATaGCCGGTGTGCTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLTHALL*PVCLEL
Trigger: CAACTCCAAGCACACCGGCCATAAGAGTGCGTGTGT...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGTTCCATCATGAAAGCTaGGTAGTTGTGCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVAFHHES*VVVHQV
Trigger: TACCTGATGCACAACTACCCAGCTTTCATGATGGAA...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTAACCAGGCGGTGATCTaGGTAGACGTGCTCATCTAC +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFNQAVI*VDVLIY
Trigger: GTAGATGAGCACGTCTACCCAGATCACCGCCTGGTT...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAAACCAGGCGGTGATCTaGGTAGACGTGCTCATCTAC +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLNQAVI*VDVLIY
Trigger: GTAGATGAGCACGTCTACCCAGATCACCGCCTGGTT...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGAATTAACAGAACCATaGAAATGGAGTTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVELTEP*KWSLKT
Trigger: CGTCTTCAAACTCCATTTCCATGGTTCTGTTAATTC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCCAAAGCCGGAGTCATTaGGTACATGTGATTTGCACC +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAQSRSH*VHVICT
Trigger: GGTGCAAATCACATGTACCCAATGACTCCGGCTTTG...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGCCACCAGTAATCTCTaGTTACCAGGTTTAATGCTT +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTATSNL*LPGLML
Trigger: AAGCATTAAACCTGGTAACCAGAGATTACTGGTGGC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTTGGGTATGGGATTTTaGAGTCCTTTTGATGTGCTA +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLLGMGF*SPFDVL
Trigger: TAGCACATCAAAAGGACTCCAAAATCCCATACCCAA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CGGCATATGTGGGGTATGTTTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTCTTAAGAGTTGGGTATaGGATTTTGGAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: RHMWGMFGIQVFEVRIQCLKSWV*DFGVLL
Trigger: CAAAAGGACTCCAAAATCCCATACCCAACTCTTAAG...ACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTTTCCAAAACGTCAGCTaGTGCTTTTCCAGCCAATTA +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTFQNVS*CFSSQL
Trigger: TAATTGGCTGGAAAAGCACCAGCTGACGTTTTGGAA...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp AGAGGGACCTTTTTCATTACGTGGATTCTGATCCTTTaGAAGTGGTTACCATCAAGTAATGTGGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: RGTFFITWILIL*KWLPSSNVELT
Trigger: AGTGAGCTCCACATTACTTGATGGTAACCACTTCAAAAGGATCAGAATCCACGTAATGAAAAAGGTCCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp ATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTaGGCAATTAAAGCCTGCCTCTTACATCTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IHHVVFYCSNCA*AIKACLLHLCV
Trigger: CACACAGAGATGTAAGAGGCAGGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp AGTAAACAGCCAAATGTGGATCAGGGACTTTCTGAGTaGTTAACCCACAGCAGCATATTTTCCCTAATCGTT +
Preference number: 4 (lower is better)
Translates to: SKQPNVDQGLSE*LTHSSIFSLIV
Trigger: AACGATTAGGGAAAATATGCTGCTGTGGGTTAACAACTCAGAAAGTCCCTGATCCACATTTGGCTGTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTACGGACACGATCAACTaGGAAATCCCTGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFTDTIN*EIPGAL
Trigger: AAGAGCACCAGGGATTTCTCAGTTGATCGTGTCCGT...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTGTCAAGGTGGAAAAATaGGAGATCATTTATTGGCAA +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFVKVEK*EIIYWQ
Trigger: TTGCCAATAAATGATCTCTCATTTTTCCACCTTGAC...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCGGTGGTCACATTTCATaGACATCTAACAACGCTGGA +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAGGHIS*TSNNAG
Trigger: TCCAGCGTTGTTAGATGTTCATGAAATGTGACCACC...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGATCATGTCAGGCAATTTaGGATATACACCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: RQYSESKTIDRVLHVILGSCQAI*DIHHVV
Trigger: AACAACATGGTGTATATCTCAAATTGCCTGACATGA...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTCATGTCAGGCAATTTaGGATATACACCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLSCQAI*DIHHVV
Trigger: AACAACATGGTGTATATCTCAAATTGCCTGACATGA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTACAAATGCTCCAGTTCTaGGGAGCCTCTCATTCACAG +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLQMLQF*GASHSQ
Trigger: CTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTG...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTATTGGGATCATGTGTaGTCAGCCAGCGAACCCCTA +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFYWDHV*SASEPL
Trigger: TAGGGGTTCGCTGGCTGAGCACACATGATCCCAATA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp ACGAATTCAGTGTACGTTGCCAGGTGTGCTTGGTCTTCTAAATTTGGAATAGATTTGAAGGTCTTTTGGTaGTTTAGGATGTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TNSVYVARCAWSSKFGIDLKVFW*FRMCAS
Trigger: ACTGGCACACATCCTAAAGCACCAAAAGACCTTCAA...ATCTATTCCAAATTTAGAAGACCAAGCACACCTGGCAACGTACACTGAATTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTGGCAAATACTCTGTTaGTCTCAGAAAATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFWQILC*SQKMLK
Trigger: CTTCAACATTTTCTGAGAGCAACAGAGTATTTGCCA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCGAAGCCTTTCCACACTaGACCGATAATTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAEAFPH*TDNFGF
Trigger: GAAGCCAAAATTATCGGTGCAGTGTGGAAAGGCTTC...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTGAATTATTATACAAATaGTCCAGTTCTGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFELLYK*SSSEEP
Trigger: AGGCTCCTCAGAACTGGAGCATTTGTATAATAATTC...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGAGCGATGGTGGTATTaGAGAATACATCCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFERWWY*RIHPAV
Trigger: CACTGCCGGATGTATTCTCCAATACCACCATCGCTC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGTGAGATGTCTGTGGTaGATGACAACTGGATCAATT +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSVRCLW*MTTGSI
Trigger: AATTGATCCAGTTGTCATCCACCACAGACATCTCAC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTTCCATCATGAAAGCTaGGTAGTTGTGCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSFHHES*VVVHQV
Trigger: TACCTGATGCACAACTACCCAGCTTTCATGATGGAA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCAATACACATGTCCACTaGGAATACTGTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKANTHVH*EYCVLQ
Trigger: CTGGAGCACACAGTATTCCCAGTGGACATGTGTATT...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGGATAGTAAAATTGTTTaGAGCTCGGCAATCATAAGA +
Preference number: 4 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSDSKIV*SSAIIR
Trigger: TCTTATGATTGCCGAGCTCCAAACAATTTTACTATC...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGATAGTAAAATTGTTTaGAGCTCGGCAATCATAAGA +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVDSKIV*SSAIIR
Trigger: TCTTATGATTGCCGAGCTCCAAACAATTTTACTATC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTACTGGCGGTACCAGTGTaGATTCCAAGTGATCATCAC +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLLAVPV*IPSDHH
Trigger: GTGATGATCACTTGGAATCCACACTGGTACCGCCAG...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCACTTCCAGGACTGGCTaGAAAGTAAACTTATTAATT +
Preference number: 4 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVTSRTG*KVNLLI
Trigger: AATTAATAAGTTTACTTTCCAGCCAGTCCTGGAAGT...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCCAGACTTCCAGGACTaGCTGGAAAGTAAACTTATT +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSPDFQD*LESKLI
Trigger: AATAAGTTTACTTTCCAGCCAGTCCTGGAAGTCTGG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGAGAATTAACAGAACCATaGAAATGGAGTTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: RQYSESKTIDRVLHVILGELTEP*KWSLKT
Trigger: CGTCTTCAAACTCCATTTCCATGGTTCTGTTAATTC...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGCCACCAGTAATCTCTaGTTACCAGGTTTAATGCTT +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSATSNL*LPGLML
Trigger: AAGCATTAAACCTGGTAACCAGAGATTACTGGTGGC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTTTGGGTATGGGATTTTaGAGTCCTTTTGATGTGCTA +
Preference number: 4 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTLGMGF*SPFDVL
Trigger: TAGCACATCAAAAGGACTCCAAAATCCCATACCCAA...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGGAATTCCATTTTGAGCAACATATTCGTGATCAATGAAGTTGCCAGAAGCACCAGGCTTGCCTATCAATaGGAGCTCTTAGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: RNSILSNIFVINEVARSTRLAYQ*ELLDLL
Trigger: AAGAAGATCTAAGAGCTCCCATTGATAGGCAAGCCT...GGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGGGAAGAATGGAGACTaGGTCACATCAAATGACAGC +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFGKNGD*VTSNDS
Trigger: GCTGTCATTTGATGTGACTCAGTCTCCATTCTTCCC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTATCGAGTGCTCCATGTaGTATTGGGATCATGTGTGC +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFIECSM*YWDHVC
Trigger: GCACACATGATCCCAATATCACATGGAGCACTCGAT...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTAGTGTGGATTCCAAGTaGTCATCACAGGTACATATA +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSSVDSK*SSQVHI
Trigger: TATATGTACCTGTGATGATCACTTGGAATCCACACT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGCATGAAAATTCTTTCTaGAGTACCAGGACAAATCTC +
Preference number: 4 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVAHENSF*STRTNL
Trigger: GAGATTTGTCCTGGTACTTCAGAAAGAATTTTCATG...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTACGTTCTTGTCGTTGGTaGACTTCTCCAGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLRSCRW*TSPDFC
Trigger: GCAAAAGTCTGGAGAAGTTCACCAACGACAAGAACG...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTATCTGGAGCATCACTTaGAAGTGTGGAGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFIWSIT*KCGDEA
Trigger: TGCCTCATCTCCACACTTGCAAGTGATGCTCCAGAT...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AGGAATTCCATTTTGAGCAACATATTCGTGATCAATGAAGTTGCCAGAAGCACCACTGGGAATACTGTGTaGTCCAGGTATCATTTCTAT +
Preference number: 4 (lower is better)
Translates to: RNSILSNIFVINEVARSTTGNTV*SRYHFY
Trigger: ATAGAAATGATACCTGGAGCACACAGTATTCCCAGT...GGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR GCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCGGAGTCCTTTTGATGTaGTACTCTTTAGCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAGVLLM*YSLALK
Trigger: TTTGAGGGCTAAAGAGTAGCACATCAAAAGGACTCC...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTTCGTTCGGTCATGTTaGGGACACACGCACTCTTAT +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFFVRSC*GHTHSY
Trigger: ATAAGAGTGCGTGTGTCCCCAACATGACCGAACGAA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTACTTCCAGGACTGGCTaGAAAGTAAACTTATTAATT +
Preference number: 4 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFTSRTG*KVNLLI
Trigger: AATTAATAAGTTTACTTTCCAGCCAGTCCTGGAAGT...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTCATCAGAGGTGTCACTaGGCTGAAGACAACTCTTGT +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFHQRCH*AEDNSC
Trigger: ACAAGAGTTGTCTTCAGCCCAGTGACACCTCTGATG...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATTTTGCTTGCAGTGGTaGCAAATGTCCGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLFCLQW*QMSVCT
Trigger: TGTGCACACGGACATTTGCCACCACTGCAAGCAAAA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCGTAAACAGCCAAATGTaGATCAGGGACTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAVNSQM*IRDFLS
Trigger: ACTCAGAAAGTCCCTGATCCACATTTGGCTGTTTAC...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGATGTCTGTGGTGGATaGCAACTGGATCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFDVCGG*QLDQFR
Trigger: TCTGAATTGATCCAGTTGTCATCCACCACAGACATC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGCTTCATTTCCATCATaGAAGCTGGGTAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFASFPS*KLGSCA
Trigger: TGCACAACTACCCAGCTTTCATGATGGAAATGAAGC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGCTTATTTTGTGCACCTaGAAGTTCACTGTATTACTT +
Preference number: 4 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVALILCT*KFTVLL
Trigger: AAGTAATACAGTGAACTTGCAGGTGCACAAAATAAG...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCGACATAGTCTTAACATaGAAGAGTCCATCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKADIVLT*KSPSER
Trigger: TCTCTCAGATGGACTCTTGCATGTTAAGACTATGTC...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAACTTCTCCAGACTTTTaGTTGCAGTGGTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLTSPDF*LQWWQM
Trigger: CATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGT...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCCTTAAGAGTTGGGTATaGGATTTTGGAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKALKSWV*DFGVLL
Trigger: CAAAAGGACTCCAAAATCCCATACCCAACTCTTAAG...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCTGATCCTTTTGAAGTaGTTACCATCAAGTAATGTG +
Preference number: 4 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSLILLK*LPSSNV
Trigger: CACATTACTTGATGGTAACCACTTCAAAAGGATCAG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
3UTR CAA 72 bp AGTGTACACATTCTGGACATAGTAATACCTCACTGGTaGGTAAACTCTGTATCCATCTACTGGATAATAGAG +
Preference number: 4 (lower is better)
Translates to: SVHILDIVIPHW*VNSVSIYWIIE
Trigger: CTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATTACTATGTCCAGAATGTGTACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
3UTR CAA 72 bp AACTTCACCGTTAGACTCCTCTTCATGTCAGGCAATTaGAGATATACACCATGTTGTTTTCTACTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: NFTVRLLFMSGN*RYTPCCFLLLK
Trigger: TTTGAGCAGTAGAAAACAACATGGTGTATATCTCAAATTGCCTGACATGAAGAGGAGTCTAACGGTGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCCATGAAAATTCTTTCTaGAGTACCAGGACAAATCTC +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAHENSF*STRTNL
Trigger: GAGATTTGTCCTGGTACTTCAGAAAGAATTTTCATG...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp CTGATTCTGGATAGTAAAATTGTTTGGAGCTCGGCAATCATAAGAAACTTGCAGTTTACCATCCATCATTaGCAAGTTCATTCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LILDSKIVWSSAIIRNLQFTIHH*QVHSSS
Trigger: ACTGCTAGAATGAACTTGTCAATGATGGATGGTAAA...CTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR GCA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCGAGCATAGTACACACTaGCAAAAAGTTAATCACAAG +
Preference number: 4 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAEHSTH*QKVNHK
Trigger: CTTGTGATTAACTTTTTGGCAGTGTGTACTATGCTC...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATCTGTATCCATCTACTaGATAATAGAGTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLSVSIY*IIEWRL
Trigger: CAACCGCCACTCTATTATCCAGTAGATGGATACAGA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGTGGTGGATGACAACTaGATCAATTCAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFVVDDN*INSEVQ
Trigger: TTGGACTTCTGAATTGATCCAGTTGTCATCCACCAC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATTCCATCATGAAAGCTaGGTAGTTGTGCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLFHHES*VVVHQV
Trigger: TACCTGATGCACAACTACCCAGCTTTCATGATGGAA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp CTGATTCTGGATAGTAAAATTGTTTGGAGCTCGGCAATCATAAGAAACTTGCAGCTGATCCTTTTGAAGTaGTTACCATCAAGTAATGTG +
Preference number: 4 (lower is better)
Translates to: LILDSKIVWSSAIIRNLQLILLK*LPSSNV
Trigger: CACATTACTTGATGGTAACCACTTCAAAAGGATCAG...CTGCAAGTTTCTTATGATTGCCGAGCTCCAAACAATTTTACTATCCAGAATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGATAGGCGAGGATACTaGTTCTGGATAGTAAAATTG +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFDRRGY*FWIVKL
Trigger: CAATTTTACTATCCAGAATCAGTATCCTCGCCTATC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGCTCTCAGAAAATGTTaGAGGTCTTTTGGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFALRKC*RSFGAL
Trigger: TAAAGCACCAAAAGACCTTCAACATTTTCTGAGAGC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTACTCTGTTGTCAATCTTaGAACTGTCTGTATCTGATG +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLLCCQS*NCLYLM
Trigger: CATCAGATACAGACAGTTCCAAGATTGACAACAGAG...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR TCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATTTACCATCCATCATTaGCAAGTTCATTCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLFTIHH*QVHSSS
Trigger: ACTGCTAGAATGAACTTGTCAATGATGGATGGTAAA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR GCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTACAGTCTCATCAGATGTaGATTCTCTCTTTAGATGAA +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLQSHQM*ILSLDE
Trigger: TTCATCTAAAGAGAGAATGCACATCTGATGAGACTG...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAGAATTAACAGAACCATaGAAATGGAGTTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLELTEP*KWSLKT
Trigger: CGTCTTCAAACTCCATTTCCATGGTTCTGTTAATTC...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAACCTTTTTCATTACGTaGATTCTGATCCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLTFFIT*ILILLK
Trigger: CTTCAAAAGGATCAGAATCCACGTAATGAAAAAGGT...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CCA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTACCTTTTTCATTACGTaGATTCTGATCCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFTFFIT*ILILLK
Trigger: CTTCAAAAGGATCAGAATCCACGTAATGAAAAAGGT...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGGGTGGCGAGCGTGGCTaGCGAGCTGCAGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQGGERG*RAAAAL
Trigger: CAGGGCTGCTGCAGCTCGCAAGCCACGCTCGCCACC...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS GCA 90 bp GAAGGATGGGGTCCCACACCTGAGCCAGGCGCGGTCTCCACTGGGTaGTCCGCAGCCCGGAGTGGCTCCGGACGACAGCCCGCTCAGCGG +
Preference number: 5 (lower is better)
Translates to: EGWGPTPEPGAVSTG*SAARSGSGRQPAQR
Trigger: CCGCTGAGCGGGCTGTCGTCCGGAGCCACTCCGGGCTGCGGAGCACCCAGTGGAGACCGCGCCTGGCTCAGGTGTGGGACCCCATCCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000493935.1
ENST00000612748.1
ENST00000613043.1
CDS TCA 90 bp CGCGAGGACTCCTCTGCGAAGACAGGAAGGATGGGGTCCCACACCTaGGCCAGGCGCGGTCTCCACTGGGTGCTCCGCAGCCCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: REDSSAKTGRMGSHT*ARRGLHWVLRSPEW
Trigger: CCACTCCGGGCTGCGGAGCACCCAGTGGAGACCGCGCCTGGCTCAGGTGTGGGACCCCATCCTTCCTGTCTTCGCAGAGGAGTCCTCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000493935.1
ENST00000612748.1
ENST00000613043.1
CDS-3UTR CAA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGAGGGGTGGGTTCCACTaGCTCTCGAAGGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQRGGFH*LSKGGV
Trigger: AACACCACCCTTCGAGAGCAAGTGGAACCCACCCCT...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS CCA 90 bp GGCTCCGGACGACAGCCCGCTCAGCGGACCTTTCGCCAGGCTCGGTaGACCTTCTCCGCTGTTCTCCTCAGGGCGCAGTCAGGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: GSGRQPAQRTFRQAR*TFSAVLLRAQSGFF
Trigger: GAAGAAACCTGACTGCGCCCTGAGGAGAACAGCGGAGAAGGTCCACCGAGCCTGGCGAAAGGTCCGCTGAGCGGGCTGTCGTCCGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000493935.1
ENST00000612748.1
ENST00000613043.1
CDS-3UTR CAA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATCGCAGGCGTCTGATCTaGCGTTTGGCAACCTCTCGC +
Preference number: 5 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDRRRLI*RLATSR
Trigger: GCGAGAGGTTGCCAAACGCAAGATCAGACGCCTGCG...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS CCA 90 bp TCGCATACTCACCACGCGAGGACTCCTCTGCGAAGACAGGAAGGATaGGGTCCCACACCTGAGCCAGGCGCGGTCTCCACTGGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: SHTHHARTPLRRQEG*GPTPEPGAVSTGCS
Trigger: GGAGCACCCAGTGGAGACCGCGCCTGGCTCAGGTGTGGGACCCCATCCTTCCTGTCTTCGCAGAGGAGTCCTCGCGTGGTGAGTATGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488574.5
ENST00000612748.1
CDS-3UTR CAA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGGTGCTCCATGTGATATaGGGATCATGTGTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQVLHVI*GSCVLS
Trigger: GCTGAGCACACATGATCCCAATATCACATGGAGCAC...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGCTTCACCTGGAGAACTaGGGCTCCATTAGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQLHLEN*GSIRCN
Trigger: ATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAAG...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS CCA 90 bp ACCCGCTTATTTCACGCGAGGACTCCTCTGCGAAGACAGGAAGGATaGGGTCCCACACCTGAGCCAGGCGCGGTCTCCACTGGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TRLFHARTPLRRQEG*GPTPEPGAVSTGCS
Trigger: GGAGCACCCAGTGGAGACCGCGCCTGGCTCAGGTGTGGGACCCCATCCTTCCTGTCTTCGCAGAGGAGTCCTCGCGTGAAATAAGCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000493935.1
CDS CCA 90 bp TTCTTCCTGCGTCAGGCGCATGCGGGCACCTCCCACCGGCTCGGTTaGATCTACCTGGTGGTGGCTTGCAATGTGAGGCAACACCAGCGC +
Preference number: 5 (lower is better)
Translates to: FFLRQAHAGTSHRLG*IYLVVACNVRQHQR
Trigger: GCGCTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGGAAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCGGTGGCGAGCGTGGCTaGCGAGCTGCAGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: WARCYGAPINCFHKYWPVGGERG*RAAAAL
Trigger: CAGGGCTGCTGCAGCTCGCAAGCCACGCTCGCCACC...GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTTCGCTCTAAATAAGTaGGTCTCCCTGCAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQFALNK*VSLQFP
Trigger: AGGGAACTGCAGGGAGACCAACTTATTTAGAGCGAA...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS TCA 90 bp GTCCCTCTACAGCGGGGCCGGGGAGTTTCCCGCCGGCGAAGACTTTaGGGCCTTGGCAGGACAATTGTCAGCGTAGTGACCTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VPLQRGRGVSRRRRL*GLGRTIVSVVTSCS
Trigger: GGAACAGGAGGTCACTACGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCGGGAAACTCCCCGGCCCCGCTGTAGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS TCA 90 bp AGAGCAGACAGCGACTTGGCGACCTCGAGGTGGGAGAGCTCCTCCTaGATGTGGTCGCTGAGGCCCTCGTGGTACTGGTCAATCAGCGCA +
Preference number: 5 (lower is better)
Translates to: RADSDLATSRWESSS*MWSLRPSWYWSISA
Trigger: TGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS GCA 90 bp GTCTTCTGGGCACTCTTCCTCTATTGGAGGGGGTGGGGCAGCAGCTaGTGCAGCACCGCGGAGCTCGATGTCATCATCCTCATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: VFWALFLYWRGWGSS*CSTAELDVIILILR
Trigger: CCTGAGGATGAGGATGATGACATCGAGCTCCGCGGTGCTGCAGCAGCTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGCCCAGAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CCA 90 bp CACTCTTATGGCCGGTGTGCTTGGAGTTGTTGTTGTTGTTGTTGTTaGGGGGAGGGGGAGGAGGAGGAGGTGGGCAGTCGGGACCCAGGG +
Preference number: 5 (lower is better)
Translates to: HSYGRCAWSCCCCCC*GEGEEEEVGSRDPG
Trigger: CCCTGGGTCCCGACTGCCCACCTCCTCCTCCTCCCCCTCCCCCCAACAACAACAACAACAACAACTCCAAGCACACCGGCCATAAGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000613043.1
ENST00000615790.5
ENST00000617526.4
CDS CCA 90 bp CTTCTCTGGGAGGTCTTCTGGGCACTCTTCCTCTATTGGAGGGGGTaGGGCAGCAGCTGCTGCAGCACCGCGGAGCTCGATGTCATCATC +
Preference number: 5 (lower is better)
Translates to: LLWEVFWALFLYWRG*GSSCCSTAELDVII
Trigger: GATGATGACATCGAGCTCCGCGGTGCTGCAGCAGCTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATGGGAGCGCTCCAGCTTaGCTGAGGCCCAACGGGCAG +
Preference number: 5 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDGSAPA*LRPNGQ
Trigger: CTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGCTCCC...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGGTAATACCTCACTGGTaGGTAAACTCTGTATCCATC +
Preference number: 5 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQVIPHW*VNSVSI
Trigger: GATGGATACAGAGTTTACCAACCAGTGAGGTATTAC...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GGAGGCGGCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGCAGCATTTCCTGCGTTaGTATCAGCTTCTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: GGGGCGGGYCGTGGWRYQQHFLR*YQLLCK
Trigger: TTTACAGAGAAGCTGATACAAACGCAGGAAATGCTG...CTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGCCGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS TCA 90 bp AGCTGGGTAGTTGTGCATCAGGTAGTGGGAGCGCTCCAGCTTTGCTaGGGCCCAACGGGCAGCACGGCCGGTCATCATGCTTGTCACGAA +
Preference number: 5 (lower is better)
Translates to: SWVVVHQVVGALQLC*GPTGSTAGHHACHE
Trigger: TTCGTGACAAGCATGATGACCGGCCGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGCTCCCACTACCTGATGCACAACTACCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS TCA 90 bp ACTTGGCGACCTCGAGGTGGGAGAGCTCCTCCTGAATGTGGTCGCTaGGGCCCTCGTGGTACTGGTCAATCAGCGCAGGCTCGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: TWRPRGGRAPPECGR*GPRGTGQSAQARSN
Trigger: ATTGGAACGAGCCTGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCACCTCGAGGTCGCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS GCA 90 bp GGTTCAGCTTTCTGCGTCTTTCTTTTTCTTCCTGCGTCAGGCGCATaGGGGCACCTCCCACCGGCTCGGTTGGATCTACCTGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: GSAFCVFLFLPASGA*GHLPPARLDLPGGG
Trigger: GCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGGAAGAAAAAGAAAGACGCAGAAAGCTGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CCA 90 bp AGCCAGCATGTCTGGGTTGCCATCGAACTTCTCTGGGAGGTCTTCTaGGCACTCTTCCTCTATTGGAGGGGGTGGGGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SQHVWVAIELLWEVF*ALFLYWRGWGSSCC
Trigger: GCAGCAGCTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGCAACCCAGACATGCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CCA 90 bp ACAGCGGGGCCGGGGAGTTTCCCGCCGGCGAAGACTTTGAGGCCTTaGCAGGACAATTGTCAGCGTAGTGACCTCCTGTTCCACAGTAGA +
Preference number: 5 (lower is better)
Translates to: TAGPGSFPPAKTLRP*QDNCQRSDLLFHSR
Trigger: TCTACTGTGGAACAGGAGGTCACTACGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCGGGAAACTCCCCGGCCCCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS CCA 90 bp TGGTTTTATTATCACGCGAGGACTCCTCTGCGAAGACAGGAAGGATaGGGTCCCACACCTGAGCCAGGCGCGGTCTCCACTGGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: WFYYHARTPLRRQEG*GPTPEPGAVSTGCS
Trigger: GGAGCACCCAGTGGAGACCGCGCCTGGCTCAGGTGTGGGACCCCATCCTTCCTGTCTTCGCAGAGGAGTCCTCGCGTGATAATAAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613043.1
CDS-3UTR CAA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAGGGAGCGCTCCAGCTTaGCTGAGGCCCAACGGGCAG +
Preference number: 5 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRGSAPA*LRPNGQ
Trigger: CTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGCTCCC...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS GCA 90 bp GCTCCAGCTTTGCTGAGGCCCAACGGGCAGCACGGCCGGTCATCATaGTTGTCACGAAGCAGACACGGACACGATCAACTGAGAAATCCC +
Preference number: 5 (lower is better)
Translates to: APALLRPNGQHGRSS*LSRSRHGHDQLRNP
Trigger: GGGATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAGCATGATGACCGGCCGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS GCA 90 bp TTCAAAACCCGCTTATTTCGCATACTCACCACGCGAGGACTCCTCTaGGAAGACAGGAAGGATGGGGTCCCACACCTGAGCCAGGCGCGG +
Preference number: 5 (lower is better)
Translates to: FKTRLFRILTTRGLL*EDRKDGVPHLSQAR
Trigger: CCGCGCCTGGCTCAGGTGTGGGACCCCATCCTTCCTGTCTTCGCAGAGGAGTCCTCGCGTGGTGAGTATGCGAAATAAGCGGGTTTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488574.5
ENST00000612748.1
CDS CCA 90 bp GGCCATGAAAGGAGCCAGCATGTCTGGGTTGCCATCGAACTTCTCTaGGAGGTCTTCTGGGCACTCTTCCTCTATTGGAGGGGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: GHERSQHVWVAIELL*EVFWALFLYWRGWG
Trigger: GCCCCACCCCCTCCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGCAACCCAGACATGCTGGCTCCTTTCATGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAACCTGGCTCTGCAGGTaGTTGTTCTCCTCCGACTGC +
Preference number: 5 (lower is better)
Translates to: PEAPESIMARTNRVCLPGTWLCR*LFSSDC
Trigger: GCAGTCGGAGGAGAACAACAACCTGCAGAGCCAGGT...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACAGGCACTCTTCCTCTATaGGAGGGGGTGGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTGTLPL*EGVGQQ
Trigger: CTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGCC...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCGGCCGGTCATCATGCTaGTCACGAAGCAGACACGGA +
Preference number: 5 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPGRSSC*SRSRHG
Trigger: TCCGTGTCTGCTTCGTGACAAGCATGATGACCGGCC...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTGACAGACCCCATGCCTaGGCGCAGGCGTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: LGPMLWGAHQLLPQVLASDRPHA*AQASDL
Trigger: AAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGTC...ACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCGACAGACCCCATGCCTaGGCGCAGGCGTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: WARCYGAPINCFHKYWPVDRPHA*AQASDL
Trigger: AAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGTC...GACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGCCGCCGGCGAAGACTTaGAGGCCTTGGCAGGACAAT +
Preference number: 5 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRPPAKT*RPWQDN
Trigger: ATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCGG...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS TCA 90 bp CAGGGGTGGGTTCCACTTGCTCTCGAAGGGTGGTGTTCTCCTCTGTaGGCTTCTGCACCTGGCTCTGCAGGTTGTTGTTCTCCTCCGACT +
Preference number: 5 (lower is better)
Translates to: QGWVPLALEGWCSPL*ASAPGSAGCCSPPT
Trigger: AGTCGGAGGAGAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGAGAACACCACCCTTCGAGAGCAAGTGGAACCCACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGACACACCAACCGAAGTaGAAGCGCGTGTACCAGGAG +
Preference number: 5 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSTHQPK*KRVYQE
Trigger: CTCCTGGTACACGCGCTTCAACTTCGGTTGGTGTGT...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482108.1
CDS-3UTR CAA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATACCTTCTCTCTTAAGTaGTTGATCTCTTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDTFSLK*LISSES
Trigger: GCTCTCTGAAGAGATCAACAACTTAAGAGAGAAGGT...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGCGCAGGCGTCTGATCTaGCGTTTGGCAACCTCTCGC +
Preference number: 5 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWRRRLI*RLATSR
Trigger: GCGAGAGGTTGCCAAACGCAAGATCAGACGCCTGCG...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCGGTGGCGAGCGTGGCTaGCGAGCTGCAGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTGGERG*RAAAAL
Trigger: CAGGGCTGCTGCAGCTCGCAAGCCACGCTCGCCACC...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGACTTCGTTCGGTCATGTaGGGGACACACGCACTCTTA +
Preference number: 5 (lower is better)
Translates to: PEAPESIMARTNRVCLPGLRSVM*GTHALL
Trigger: TAAGAGTGCGTGTGTCCCCAACATGACCGAACGAAG...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCCGCAGGCGTCTGATCTaGCGTTTGGCAACCTCTCGC +
Preference number: 5 (lower is better)
Translates to: PASYISVCGSKMESQQPGRRRLI*RLATSR
Trigger: GCGAGAGGTTGCCAAACGCAAGATCAGACGCCTGCG...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCGACAGACCCCATGCCTaGGCGCAGGCGTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: PASYISVCGSKMESQQPGDRPHA*AQASDL
Trigger: AAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGTC...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAGAAGACTTTGAGGCCTaGGCAGGACAATTGTCAGCG +
Preference number: 5 (lower is better)
Translates to: PEAPESIMARTNRVCLPGEDFEA*AGQLSA
Trigger: CGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTC...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGCCGCCGGCGAAGACTTaGAGGCCTTGGCAGGACAAT +
Preference number: 5 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLPPAKT*RPWQDN
Trigger: ATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCGG...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTTGGTATCCAGGTATTaGAGGTACGAATTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDLVSRY*RYEFSV
Trigger: TACACTGAATTCGTACCTCAAATACCTGGATACCAA...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS GCA 90 bp CGTAGTGACCTCCTGTTCCACAGTAGAGGCACAGGTTCAGCTTTCTaGGTCTTTCTTTTTCTTCCTGCGTCAGGCGCATGCGGGCACCTC +
Preference number: 5 (lower is better)
Translates to: RSDLLFHSRGTGSAF*VFLFLPASGACGHL
Trigger: GAGGTGCCCGCATGCGCCTGACGCAGGAAGAAAAAGAAAGACGCAGAAAGCTGAACCTGTGCCTCTACTGTGGAACAGGAGGTCACTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp ACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCTGGGGCGCCCATCAATaGCTTCCACAAGTATTGGCC +
Preference number: 5 (lower is better)
Translates to: TTGPDAMGRPSIASTSIGWGAHQ*LPQVLA
Trigger: GGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCA...GCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGAATGGAGCTTCGTTCGGTCATGTaGGGGACACACGCACTCTTA +
Preference number: 5 (lower is better)
Translates to: WDHVCSASEPLGRQGRMELRSVM*GTHALL
Trigger: TAAGAGTGCGTGTGTCCCCAACATGACCGAACGAAG...CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGGGAGCGCTCCAGCTTaGCTGAGGCCCAACGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFGSAPA*LRPNGQ
Trigger: CTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGCTCCC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAAGAGCAGACAGCGACTaGGCGACCTCGAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GRMETESHQMTAPLGDLPRADSD*ATSRWE
Trigger: CTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTCT...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGCTACCTGGTGGTGGCTaGCAATGTGAGGCAACACCA +
Preference number: 5 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWLPGGG*QCEATP
Trigger: TGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAG...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACACTACCTGGTGGTGGCTaGCAATGTGAGGCAACACCA +
Preference number: 5 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTLPGGG*QCEATP
Trigger: TGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAG...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCACCGCCGGCGAAGACTTaGAGGCCTTGGCAGGACAAT +
Preference number: 5 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAPPAKT*RPWQDN
Trigger: ATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCGG...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp GCGGCTGTGGCGGCGGGTACTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCCTCCGAGTTTATTaGAAATCTTTAAGGATAGCA +
Preference number: 5 (lower is better)
Translates to: AAVAAGTVVPEAGGTSVDSLRVY*KSLRIA
Trigger: TGCTATCCTTAAAGATTTCAAATAAACTCGGAGGGA...ATCCACACTGGTACCGCCAGCCTCCGGTACCACAGTACCCGCCGCCACAGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS TCA 90 bp TCCTCAGGGCGCAGTCAGGTTTCTTCGACACACACCAACCGAAGTTaGAGCGCGTGTACCAGGAGCGCAGACTGTGAGCCTTATATAGGT +
Preference number: 5 (lower is better)
Translates to: SSGRSQVSSTHTNRS*SACTRSADCEPYIG
Trigger: ACCTATATAAGGCTCACAGTCTGCGCTCCTGGTACACGCGCTTCAACTTCGGTTGGTGTGTGTCGAAGAAACCTGACTGCGCCCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482108.1
CDS-3UTR CAA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGGGAGCGATGGTGGTATaGGAGAATACATCCGGCAGT +
Preference number: 5 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWGAMVV*ENTSGS
Trigger: ACTGCCGGATGTATTCTCCAATACCACCATCGCTCC...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp AACTATCAGGTCGTGAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCTGTGGCCCTCTTATTTaGTGCACCTGCAAGTTCACT +
Preference number: 5 (lower is better)
Translates to: NYQVVSFVDNWARCYGAPCGPLI*CTCKFT
Trigger: AGTGAACTTGCAGGTGCACAAAATAAGAGGGCCACA...GGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTCACGACCTGATAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGATTATGGCCGGTGTGCTaGGAGTTGTTGTTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PEAPESIMARTNRVCLPGLWPVC*ELLLLL
Trigger: CAACAACAACAACAACTCCAAGCACACCGGCCATAA...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGAGGGGTGGGTTCCACTaGCTCTCGAAGGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQRGGFH*LSKGGV
Trigger: AACACCACCCTTCGAGAGCAAGTGGAACCCACCCCT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGGCCGGTCATCATGCTaGTCACGAAGCAGACACGGA +
Preference number: 5 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQGRSSC*SRSRHG
Trigger: TCCGTGTCTGCTTCGTGACAAGCATGATGACCGGCC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCAGAGCAGACAGCGACTaGGCGACCTCGAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTRADSD*ATSRWE
Trigger: CTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTCT...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGGTGGCGAGCGTGGCTaGCGAGCTGCAGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTGGERG*RAAAAL
Trigger: CAGGGCTGCTGCAGCTCGCAAGCCACGCTCGCCACC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCTCCCACCGGCTCGGTaGGATCTACCTGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFLPPAR*DLPGGG
Trigger: GCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAG...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTCCCCGGCGAAGACTTaGAGGCCTTGGCAGGACAAT +
Preference number: 5 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQSPAKT*RPWQDN
Trigger: ATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGGGA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612941.2
ENST00000617526.4
CDS TCA 90 bp GCCGGTCATCATGCTTGTCACGAAGCAGACACGGACACGATCAACTaGGAAATCCCTGGTGCTCTTTTCCATGAAGATCTGGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: AGHHACHEADTDTIN*EIPGALFHEDLALG
Trigger: GCCCAGTGCCAGATCTTCATGGAAAAGAGCACCAGGGATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAGCATGATGACCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS TCA 90 bp CCTTGGCGCAGGCGTCTGATCTTGCGTTTGGCAACCTCTCGCCTCTaGGGGTCTTCAAAGACATGCTTCATTTCCATCATGAAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: PWRRRLILRLATSRL*GSSKTCFISIMKAG
Trigger: CCCAGCTTTCATGATGGAAATGAAGCATGTCTTTGAAGACCCTCAGAGGCGAGAGGTTGCCAAACGCAAGATCAGACGCCTGCGCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCCTTCGTTCGGTCATGTaGGGGACACACGCACTCTTA +
Preference number: 5 (lower is better)
Translates to: PASYISVCGSKMESQQPGLRSVM*GTHALL
Trigger: TAAGAGTGCGTGTGTCCCCAACATGACCGAACGAAG...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCACCTGGCTCTGCAGGTaGTTGTTCTCCTCCGACTGC +
Preference number: 5 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGTWLCR*LFSSDC
Trigger: GCAGTCGGAGGAGAACAACAACCTGCAGAGCCAGGT...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGGCACTCTTCCTCTATaGGAGGGGGTGGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVGTLPL*EGVGQQ
Trigger: CTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGCC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTGGCACTCTTCCTCTATaGGAGGGGGTGGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFGTLPL*EGVGQQ
Trigger: CTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGCC...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGACGCAGGCGTCTGATCTaGCGTTTGGCAACCTCTCGC +
Preference number: 5 (lower is better)
Translates to: MGRPSIASTSIGQSLILRRRRLI*RLATSR
Trigger: GCGAGAGGTTGCCAAACGCAAGATCAGACGCCTGCG...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCCGCAGGCGTCTGATCTaGCGTTTGGCAACCTCTCGC +
Preference number: 5 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTRRRLI*RLATSR
Trigger: GCGAGAGGTTGCCAAACGCAAGATCAGACGCCTGCG...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGAGAGCAGACAGCGACTaGGCGACCTCGAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLRADSD*ATSRWE
Trigger: CTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTCT...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CGGCATATGTGGGGTATGTTTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTCTCCCACCGGCTCGGTaGGATCTACCTGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: RHMWGMFGIQVFEVRIQCLPPAR*DLPGGG
Trigger: GCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAG...ACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TGTGAGGGTCAACCAGGCGGTGATCTGGGTAGACGTGCTCATCTACTGGAGTGTCTTCACCTGGAGAACTaGGGCTCCATTAGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: CEGQPGGDLGRRAHLLECLHLEN*GSIRCN
Trigger: ATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAAG...ACACTCCAGTAGATGAGCACGTCTACCCAGATCACCGCCTGGTTGACCCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACACTTCACCTGGAGAACTaGGGCTCCATTAGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTLHLEN*GSIRCN
Trigger: ATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAAG...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATCGAATTCAGTGTACGTaGCCAGGTGTGCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDRIQCT*PGVLGL
Trigger: AAGACCAAGCACACCTGGCAACGTACACTGAATTCG...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAGTTGCTTTGAGTCCTTaGAGTTGCTTTCTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: PEAPESIMARTNRVCLPGVALSP*SCFLRL
Trigger: AAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAAC...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp CTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCAGGGACTTTCTGAGTaGTTAACCCACAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: LGPMLWGAHQLLPQVLASQGLSE*LTHSSI
Trigger: TATGCTGCTGTGGGTTAACAACTCAGAAAGTCCCTG...ACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS CCA 90 bp ACACGATCAACTGAGAAATCCCTGGTGCTCTTTTCCATGAAGATCTaGCACTGGGCCATGAAAGGAGCCAGCATGTCTGGGTTGCCATCG +
Preference number: 5 (lower is better)
Translates to: TRSTEKSLVLFSMKI*HWAMKGASMSGLPS
Trigger: CGATGGCAACCCAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCAGGGATTTCTCAGTTGATCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCATGGGGCGCCCATCAATaGCTTCCACAAGTATTGGCC +
Preference number: 5 (lower is better)
Translates to: GRMETESHQMTAPLGDLPWGAHQ*LPQVLA
Trigger: GGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCA...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TCTCGAAGAGCTGCCATTTCAGGTTCGGACAGTGAATACACATGTCCACTGGGATGGGGCGCCCATCAATaGCTTCCACAAGTATTGGCC +
Preference number: 5 (lower is better)
Translates to: SRRAAISGSDSEYTCPLGWGAHQ*LPQVLA
Trigger: GGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCA...TCCCAGTGGACATGTGTATTCACTGTCCGAACCTGAAATGGCAGCTCTTCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGGAGCGATGGTGGTATaGGAGAATACATCCGGCAGT +
Preference number: 5 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQGAMVV*ENTSGS
Trigger: ACTGCCGGATGTATTCTCCAATACCACCATCGCTCC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGAGGCACTCTTCCTCTATaGGAGGGGGTGGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RQYSESKTIDRVLHVILGGTLPL*EGVGQQ
Trigger: CTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGCC...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGGGAGCGCTCCAGCTTaGCTGAGGCCCAACGGGCAG +
Preference number: 5 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSGSAPA*LRPNGQ
Trigger: CTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGCTCCC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGACAGACCCCATGCCTaGGCGCAGGCGTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASDRPHA*AQASDL
Trigger: AAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGTC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTCTCCCACCGGCTCGGTaGGATCTACCTGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTLPPAR*DLPGGG
Trigger: GCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAG...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGAAGACTTTGAGGCCTaGGCAGGACAATTGTCAGCG +
Preference number: 5 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAEDFEA*AGQLSA
Trigger: CGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTC...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGTATTGGCCAGTCCTaGATTCTTAGAGGAATTCCA +
Preference number: 5 (lower is better)
Translates to: PEAPESIMARTNRVCLPGSIGQS*ILRGIP
Trigger: TGGAATTCCTCTAAGAATCAAGGACTGGCCAATACT...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATCCTACTGGGTAGGTCGACTGCACCGATAATTTaGGCTTCCTTAATAAGGCCT +
Preference number: 5 (lower is better)
Translates to: FLVRLVPLGTRRILLGRSTAPII*ASLIRP
Trigger: AGGCCTTATTAAGGAAGCCAAAATTATCGGTGCAGT...CGACCTACCCAGTAGGATTCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGAGGCTTTTCATCCATaGGCAGCTTCACATCAGCTC +
Preference number: 5 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTEAFHP*AASHQL
Trigger: GAGCTGATGTGAAGCTGCCAATGGATGAAAAGCCTC...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGTGCTCAAACTGTGCTTaGGCAATTAAAGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKCSNCA*AIKACL
Trigger: GAGGCAGGCTTTAATTGCCAAAGCACAGTTTGAGCA...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACATTCGCTCTAAATAAGTaGGTCTCCCTGCAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTFALNK*VSLQFP
Trigger: AGGGAACTGCAGGGAGACCAACTTATTTAGAGCGAA...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS CCA 90 bp TCAACTGAGAAATCCCTGGTGCTCTTTTCCATGAAGATCTGGCACTaGGCCATGAAAGGAGCCAGCATGTCTGGGTTGCCATCGAACTTC +
Preference number: 5 (lower is better)
Translates to: STEKSLVLFSMKIWH*AMKGASMSGLPSNF
Trigger: GAAGTTCGATGGCAACCCAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCAGGGATTTCTCAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGTGCTCCATGTGATATaGGGATCATGTGTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQVLHVI*GSCVLS
Trigger: GCTGAGCACACATGATCCCAATATCACATGGAGCAC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCGGAGCGATGGTGGTATaGGAGAATACATCCGGCAGT +
Preference number: 5 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGGAMVV*ENTSGS
Trigger: ACTGCCGGATGTATTCTCCAATACCACCATCGCTCC...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGATGGCTCTGCAGGTTGTaGTTCTCCTCCGACTGCTTC +
Preference number: 5 (lower is better)
Translates to: MGRPSIASTSIGQSLILRWLCRL*FSSDCF
Trigger: GAAGCAGTCGGAGGAGAACAACAACCTGCAGAGCCA...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCTGGCTCTGCAGGTTGTaGTTCTCCTCCGACTGCTTC +
Preference number: 5 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTWLCRL*FSSDCF
Trigger: GAAGCAGTCGGAGGAGAACAACAACCTGCAGAGCCA...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTACCTGGCTCTGCAGGTaGTTGTTCTCCTCCGACTGC +
Preference number: 5 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFTWLCR*LFSSDC
Trigger: GCAGTCGGAGGAGAACAACAACCTGCAGAGCCAGGT...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGAGGGGTGGGTTCCACTaGCTCTCGAAGGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLRGGFH*LSKGGV
Trigger: AACACCACCCTTCGAGAGCAAGTGGAACCCACCCCT...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTAGGGGTGGGTTCCACTaGCTCTCGAAGGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFRGGFH*LSKGGV
Trigger: AACACCACCCTTCGAGAGCAAGTGGAACCCACCCCT...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGGCACTCTTCCTCTATaGGAGGGGGTGGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTGTLPL*EGVGQQ
Trigger: CTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGCC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGAGAGCAGACAGCGACTaGGCGACCTCGAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVARADSD*ATSRWE
Trigger: CTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTCT...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGACTACCTGGTGGTGGCTaGCAATGTGAGGCAACACCA +
Preference number: 5 (lower is better)
Translates to: MGRPSIASTSIGQSLILRLPGGG*QCEATP
Trigger: TGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAG...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCTCCCACCGGCTCGGTaGGATCTACCTGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSLPPAR*DLPGGG
Trigger: GCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTAGTATTGGCCAGTCCTaGATTCTTAGAGGAATTCCA +
Preference number: 5 (lower is better)
Translates to: LGPMLWGAHQLLPQVLASSIGQS*ILRGIP
Trigger: TGGAATTCCTCTAAGAATCAAGGACTGGCCAATACT...ACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACTTCACCTGGAGAACTaGGGCTCCATTAGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQLHLEN*GSIRCN
Trigger: ATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAAG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACAGCAATCATAAGAAACTaGCAGTTTCCACCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTAIIRN*QFPPPL
Trigger: AAGAGGGGGTGGAAACTGCAAGTTTCTTATGATTGC...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGCGAATTCAGTGTACGTaGCCAGGTGTGCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQRIQCT*PGVLGL
Trigger: AAGACCAAGCACACCTGGCAACGTACACTGAATTCG...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACGAATTCAGTGTACGTaGCCAGGTGTGCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQRIQCT*PGVLGL
Trigger: AAGACCAAGCACACCTGGCAACGTACACTGAATTCG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CCTCTCGGTGATCTCCCAGGTCAACTATCAGGTCGTGAGTTTCGTGGACAACTGTCAAAGCCGGAGTCATaGGGTACATGTGATTTGCAC +
Preference number: 5 (lower is better)
Translates to: PLGDLPGQLSGREFRGQLSKPES*GTCDLH
Trigger: GTGCAAATCACATGTACCCAATGACTCCGGCTTTGA...CAGTTGTCCACGAAACTCACGACCTGATAGTTGACCTGGGAGATCACCGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACATCAAAGCCGGAGTCATaGGGTACATGTGATTTGCAC +
Preference number: 5 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTSKPES*GTCDLH
Trigger: GTGCAAATCACATGTACCCAATGACTCCGGCTTTGA...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACAACCAGGTTTAATGCTTaGTGGAAGCCATCATGGCAT +
Preference number: 5 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTTRFNA*WKPSWH
Trigger: ATGCCATGATGGCTTCCACAAAGCATTAAACCTGGT...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGACCAGGTTTAATGCTTaGTGGAAGCCATCATGGCAT +
Preference number: 5 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWTRFNA*WKPSWH
Trigger: ATGCCATGATGGCTTCCACAAAGCATTAAACCTGGT...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCGTGCTCCATGTGATATaGGGATCATGTGTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGVLHVI*GSCVLS
Trigger: GCTGAGCACACATGATCCCAATATCACATGGAGCAC...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCATCTCTGTTGTCAATCTaGGAACTGTCTGTATCTGAT +
Preference number: 5 (lower is better)
Translates to: EFRGQLGPMLWGAHQLLPSLLSI*ELSVSD
Trigger: ATCAGATACAGACAGTTCCAAGATTGACAACAGAGA...TGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp CGGCATATGTGGGGTATGTTTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTGGCCGGTCATCATGCTaGTCACGAAGCAGACACGGA +
Preference number: 5 (lower is better)
Translates to: RHMWGMFGIQVFEVRIQCGRSSC*SRSRHG
Trigger: TCCGTGTCTGCTTCGTGACAAGCATGATGACCGGCC...ACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTAGAGCAGACAGCGACTaGGCGACCTCGAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSRADSD*ATSRWE
Trigger: CTCCCACCTCGAGGTCGCCAAGTCGCTGTCTGCTCT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCTACCTGGTGGTGGCTaGCAATGTGAGGCAACACCA +
Preference number: 5 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFLPGGG*QCEATP
Trigger: TGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAG...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGACATCTTTTACATTTCTaGCCACAAAATCTCGAAGAG +
Preference number: 5 (lower is better)
Translates to: PEAPESIMARTNRVCLPGHLLHF*PQNLEE
Trigger: CTCTTCGAGATTTTGTGGCAAGAAATGTAAAAGATG...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CCAGGCGAATCCTACTGGGTAGGTCGGGTACGCGGCATATGTGGGGTATGTTTGTTCTGGATAGTAAAATaGTTTGGAGCTCGGCAATCA +
Preference number: 5 (lower is better)
Translates to: PGESYWVGRVRGICGVCLFWIVK*FGARQS
Trigger: TGATTGCCGAGCTCCAAACAATTTTACTATCCAGAA...CAAACATACCCCACATATGCCGCGTACCCGACCTACCCAGTAGGATTCGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCCGAATTCAGTGTACGTaGCCAGGTGTGCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGRIQCT*PGVLGL
Trigger: AAGACCAAGCACACCTGGCAACGTACACTGAATTCG...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CTGTGGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTTGGTATCCAGGTATTaGAGGTACGAATTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: LWYRRLAVPVWIPSDHHRLVSRY*RYEFSV
Trigger: TACACTGAATTCGTACCTCAAATACCTGGATACCAA...CCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACCACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGATATGTGGGGTATGTTaGGTATCCAGGTATTTGAGG +
Preference number: 5 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWICGVC*VSRYLR
Trigger: CCTCAAATACCTGGATACCAAACATACCCCACATAT...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGATGGTGATGGAGGTTTaGGCAGGTAAAACCCAGACT +
Preference number: 5 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQMVMEV*AGKTQT
Trigger: AGTCTGGGTTTTACCTGCCAAAACCTCCATCACCAT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAAGACAACTCTTGTGTaGTCCGTTGCTTTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: PASYISVCGSKMESQQPGKTTLV*SVALSP
Trigger: AGGACTCAAAGCAACGGACAACACAAGAGTTGTCTT...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CCAGAAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAGAGATATACACCATGTaGTTTTCTACTGCTCAAACT +
Preference number: 5 (lower is better)
Translates to: PEAPESIMARTNRVCLPGEIYTM*FSTAQT
Trigger: AGTTTGAGCAGTAGAAAACAACATGGTGTATATCTC...TCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS CCA 90 bp CTAAGACAAATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTaGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGG +
Preference number: 5 (lower is better)
Translates to: LRQIPHWLVNSVSIY*IIEWRLWCWWWERW
Trigger: CCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATTTGTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465184.1
CDS-3UTR CAA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGAGTGCTCCATGTGATATaGGGATCATGTGTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: MGRPSIASTSIGQSLILRVLHVI*GSCVLS
Trigger: GCTGAGCACACATGATCCCAATATCACATGGAGCAC...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGGAGCGATGGTGGTATaGGAGAATACATCCGGCAGT +
Preference number: 5 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASGAMVV*ENTSGS
Trigger: ACTGCCGGATGTATTCTCCAATACCACCATCGCTCC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGATGGCTCTGCAGGTTGTaGTTCTCCTCCGACTGCTTC +
Preference number: 5 (lower is better)
Translates to: RQYSESKTIDRVLHVILGWLCRL*FSSDCF
Trigger: GAAGCAGTCGGAGGAGAACAACAACCTGCAGAGCCA...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTACCTGGCTCTGCAGGTaGTTGTTCTCCTCCGACTGC +
Preference number: 5 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTTWLCR*LFSSDC
Trigger: GCAGTCGGAGGAGAACAACAACCTGCAGAGCCAGGT...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGAAGACTTTGAGGCCTaGGCAGGACAATTGTCAGCG +
Preference number: 5 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASEDFEA*AGQLSA
Trigger: CGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GAGTTTCGTGGACAACTGGGCCCGATGCTATGGGGCGCCCATCAATTGCTTCCACATCTTTTACATTTCTaGCCACAAAATCTCGAAGAG +
Preference number: 5 (lower is better)
Translates to: EFRGQLGPMLWGAHQLLPHLLHF*PQNLEE
Trigger: CTCTTCGAGATTTTGTGGCAAGAAATGTAAAAGATG...TGGAAGCAATTGATGGGCGCCCCATAGCATCGGGCCCAGTTGTCCACGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp AAGCACCAGAATCGATCATGGCTCGGACGAACAGGGTGTGTCTGCCCGGAAGATTTGGTATCCAGGTATTaGAGGTACGAATTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: KHQNRSWLGRTGCVCPEDLVSRY*RYEFSV
Trigger: TACACTGAATTCGTACCTCAAATACCTGGATACCAA...ATCTTCCGGGCAGACACACCCTGTTCGTCCGAGCCATGATCGATTCTGGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGAATATGTGGGGTATGTTaGGTATCCAGGTATTTGAGG +
Preference number: 5 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRICGVC*VSRYLR
Trigger: CCTCAAATACCTGGATACCAAACATACCCCACATAT...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACACCATGGAAATGGAGTTaGAAGACGGTGAAGTTTCTA +
Preference number: 5 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTPWKWS*KTVKFL
Trigger: TAGAAACTTCACCGTCTTCAAACTCCATTTCCATGG...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATCGAGTTGCTGCTCCTaGAGAATTAACAGAACCATG +
Preference number: 5 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQASSCCS*RINRTM
Trigger: CATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCGA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGGGAGCGATGGTGGTATTGGTTTGAGTCCTTTGAGTaGCTTTCTGAGGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: WIIEWRLWCWWWERWWYWFESFE*LSEAFH
Trigger: ATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAA...CCAATACCACCATCGCTCCCACCACCAGCACCACAACCGCCACTCTATTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGTTGCTTTGAGTCCTTaGAGTTGCTTTCTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQVALSP*SCFLRL
Trigger: AAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAAC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGAAGACAACTCTTGTGTaGTCCGTTGCTTTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQKTTLV*SVALSP
Trigger: AGGACTCAAAGCAACGGACAACACAAGAGTTGTCTT...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGTGCTCCATGTGATATaGGGATCATGTGTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASVLHVI*GSCVLS
Trigger: GCTGAGCACACATGATCCCAATATCACATGGAGCAC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTGGAGCGATGGTGGTATaGGAGAATACATCCGGCAGT +
Preference number: 5 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFGAMVV*ENTSGS
Trigger: ACTGCCGGATGTATTCTCCAATACCACCATCGCTCC...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AAACTCTGTATCCATCTACTGGATAATAGAGTGGCGGTTGTGGTGCTGGTGGTGTTATGGCCGGTGTGCTaGGAGTTGTTGTTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: KLCIHLLDNRVAVVVLVVLWPVC*ELLLLL
Trigger: CAACAACAACAACAACTCCAAGCACACCGGCCATAA...CACCACCAGCACCACAACCGCCACTCTATTATCCAGTAGATGGATACAGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTCTTCGTTCGGTCATGTaGGGGACACACGCACTCTTA +
Preference number: 5 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFLRSVM*GTHALL
Trigger: TAAGAGTGCGTGTGTCCCCAACATGACCGAACGAAG...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTTGGCTCTGCAGGTTGTaGTTCTCCTCCGACTGCTTC +
Preference number: 5 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTWLCRL*FSSDCF
Trigger: GAAGCAGTCGGAGGAGAACAACAACCTGCAGAGCCA...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTACCTGGCTCTGCAGGTaGTTGTTCTCCTCCGACTGC +
Preference number: 5 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSTWLCR*LFSSDC
Trigger: GCAGTCGGAGGAGAACAACAACCTGCAGAGCCAGGT...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAATATGTGGGGTATGTTaGGTATCCAGGTATTTGAGG +
Preference number: 5 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAICGVC*VSRYLR
Trigger: CCTCAAATACCTGGATACCAAACATACCCCACATAT...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAACCATGGAAATGGAGTTaGAAGACGGTGAAGTTTCTA +
Preference number: 5 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQPWKWS*KTVKFL
Trigger: TAGAAACTTCACCGTCTTCAAACTCCATTTCCATGG...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGAGATGATGGTAAGGTGTaGTGTCAAAGCCGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: MGRPSIASTSIGQSLILRDDGKV*CQSRSH
Trigger: ATGACTCCGGCTTTGACACAACACCTTACCATCATC...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGGATTTTGGAGTCCTTTaGATGTGCTACTCTTTAGCC +
Preference number: 5 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQDFGVL*MCYSLA
Trigger: GGCTAAAGAGTAGCACATCAAAAGGACTCCAAAATC...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAGATTTTGGAGTCCTTTaGATGTGCTACTCTTTAGCC +
Preference number: 5 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQADFGVL*MCYSLA
Trigger: GGCTAAAGAGTAGCACATCAAAAGGACTCCAAAATC...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCGTGTTGTCCGTTGCTTaGAGTCCTTTGAGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGVLSVA*SPLSCF
Trigger: AAAGCAACTCAAAGGACTCAAAGCAACGGACAACAC...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp GTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACAGGGAAGGAGATATACACCATGTaGTTTTCTACTGCTCAAACT +
Preference number: 5 (lower is better)
Translates to: VILGSCVLSQRTPRTTGKEIYTM*FSTAQT
Trigger: AGTTTGAGCAGTAGAAAACAACATGGTGTATATCTC...CTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp GGTACCGGAGGCTGGCGGTACCAGTGTGGATTCCAAGTGATCATCACAGGTACATCCCTCCGAGTTTATTaGAAATCTTTAAGGATAGCA +
Preference number: 5 (lower is better)
Translates to: GTGGWRYQCGFQVIITGTSLRVY*KSLRIA
Trigger: TGCTATCCTTAAAGATTTCAAATAAACTCGGAGGGA...TGTACCTGTGATGATCACTTGGAATCCACACTGGTACCGCCAGCCTCCGGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTGGGGCGCCCATCAATaGCTTCCACAAGTATTGGCC +
Preference number: 5 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSWGAHQ*LPQVLA
Trigger: GGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTGTGGCCCTCTTATTTaGTGCACCTGCAAGTTCACT +
Preference number: 5 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVCGPLI*CTCKFT
Trigger: AGTGAACTTGCAGGTGCACAAAATAAGAGGGCCACA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGTTATGGCCGGTGTGCTaGGAGTTGTTGTTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLLWPVC*ELLLLL
Trigger: CAACAACAACAACAACTCCAAGCACACCGGCCATAA...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTTTATGGCCGGTGTGCTaGGAGTTGTTGTTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFLWPVC*ELLLLL
Trigger: CAACAACAACAACAACTCCAAGCACACCGGCCATAA...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AGGAATTCCATTTTGAGCAACATATTCGTGATCAATGAAGTTGCCAGAAGCACCTGGCTCTGCAGGTTGTaGTTCTCCTCCGACTGCTTC +
Preference number: 5 (lower is better)
Translates to: RNSILSNIFVINEVARSTWLCRL*FSSDCF
Trigger: GAAGCAGTCGGAGGAGAACAACAACCTGCAGAGCCA...GGTGCTTCTGGCAACTTCATTGATCACGAATATGTTGCTCAAAATGGAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCAGGGGTGGGTTCCACTaGCTCTCGAAGGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: DIHHVVFYCSNCALAIKARGGFH*LSKGGV
Trigger: AACACCACCCTTCGAGAGCAAGTGGAACCCACCCCT...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCTACCTGGTGGTGGCTaGCAATGTGAGGCAACACCA +
Preference number: 5 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSLPGGG*QCEATP
Trigger: TGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTGAAGACTTTGAGGCCTaGGCAGGACAATTGTCAGCG +
Preference number: 5 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTEDFEA*AGQLSA
Trigger: CGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTC...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CAGGTACATATAGTGATCTTCCTTGTCCGTCTCGTCCCACTGGGTACCAGGCGACATCTTTTACATTTCTaGCCACAAAATCTCGAAGAG +
Preference number: 5 (lower is better)
Translates to: QVHIVIFLVRLVPLGTRRHLLHF*PQNLEE
Trigger: CTCTTCGAGATTTTGTGGCAAGAAATGTAAAAGATG...TCGCCTGGTACCCAGTGGGACGAGACGGACAAGGAAGATCACTATATGTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CTCCATGTGATATTGGGATCATGTGTGCTCAGCCAGCGAACCCCTAGGACGACATTGGCAAATACTCTGTaGCTCTCAGAAAATGTTGAA +
Preference number: 5 (lower is better)
Translates to: LHVILGSCVLSQRTPRTTLANTL*LSENVE
Trigger: TTCAACATTTTCTGAGAGCAACAGAGTATTTGCCAA...TGTCGTCCTAGGGGTTCGCTGGCTGAGCACACATGATCCCAATATCACATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp CCTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATGAGAGATCATTTATaGGCAAATACTCTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: PASYISVCGSKMESQQPGMRDHL*ANTLLL
Trigger: GAGCAACAGAGTATTTGCCAATAAATGATCTCTCAT...GCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCTCAAAGCCGGAGTCATaGGGTACATGTGATTTGCAC +
Preference number: 5 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVSKPES*GTCDLH
Trigger: GTGCAAATCACATGTACCCAATGACTCCGGCTTTGA...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAATTTGAGTCCTTTGAGTaGCTTTCTGAGGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQFESFE*LSEAFH
Trigger: ATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAA...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTCAGGGACTTTCTGAGTaGTTAACCCACAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFQGLSE*LTHSSI
Trigger: TATGCTGCTGTGGGTTAACAACTCAGAAAGTCCCTG...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCTGGGGCGCCCATCAATaGCTTCCACAAGTATTGGCC +
Preference number: 5 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAWGAHQ*LPQVLA
Trigger: GGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCA...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGACAGACCCCATGCCTaGGCGCAGGCGTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFDRPHA*AQASDL
Trigger: AAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGTC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp ATGGGGCGCCCATCAATTGCTTCCACAAGTATTGGCCAGTCCTTGATTCTTAGAAGTATTGGCCAGTCCTaGATTCTTAGAGGAATTCCA +
Preference number: 5 (lower is better)
Translates to: MGRPSIASTSIGQSLILRSIGQS*ILRGIP
Trigger: TGGAATTCCTCTAAGAATCAAGGACTGGCCAATACT...TCTAAGAATCAAGGACTGGCCAATACTTGTGGAAGCAATTGATGGGCGCCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCGTAATACCTCACTGGTaGGTAAACTCTGTATCCATC +
Preference number: 5 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTVIPHW*VNSVSI
Trigger: GATGGATACAGAGTTTACCAACCAGTGAGGTATTAC...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp ACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCAGGTCAACTATCAGTAATACCTCACTGGTaGGTAAACTCTGTATCCATC +
Preference number: 5 (lower is better)
Translates to: TESHQMTAPLGDLPGQLSVIPHW*VNSVSI
Trigger: GATGGATACAGAGTTTACCAACCAGTGAGGTATTAC...TGATAGTTGACCTGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCATTCTGGATAGTAAAATaGTTTGGAGCTCGGCAATCA +
Preference number: 5 (lower is better)
Translates to: GRMETESHQMTAPLGDLPFWIVK*FGARQS
Trigger: TGATTGCCGAGCTCCAAACAATTTTACTATCCAGAA...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp CACTGGGAATACTGTGTGCTCCAGGTATCATTTCTATGTGAGGGTCAACCAGGCTTCTGGATAGTAAAATaGTTTGGAGCTCGGCAATCA +
Preference number: 5 (lower is better)
Translates to: HWEYCVLQVSFLCEGQPGFWIVK*FGARQS
Trigger: TGATTGCCGAGCTCCAAACAATTTTACTATCCAGAA...GCCTGGTTGACCCTCACATAGAAATGATACCTGGAGCACACAGTATTCCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp TTTTGCTTGCAGTGGTGGCAAATGTCCGTGTGCACATGCCAGGGCTACAGACAAATGAGAGATCATTTATaGGCAAATACTCTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: FCLQWWQMSVCTCQGYRQMRDHL*ANTLLL
Trigger: GAGCAACAGAGTATTTGCCAATAAATGATCTCTCAT...TTGTCTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTGCAAGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCAATGAGAGATCATTTATaGGCAAATACTCTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQAMRDHL*ANTLLL
Trigger: GAGCAACAGAGTATTTGCCAATAAATGATCTCTCAT...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCATGGTGATGGAGGTTTaGGCAGGTAAAACCCAGACT +
Preference number: 5 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLMVMEV*AGKTQT
Trigger: AGTCTGGGTTTTACCTGCCAAAACCTCCATCACCAT...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTTCGAGTTGCTGCTCCTaGAGAATTAACAGAACCATG +
Preference number: 5 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASSSCCS*RINRTM
Trigger: CATGGTTCTGTTAATTCTCAAGGAGCAGCAACTCGA...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTGATGATGGTAAGGTGTaGTGTCAAAGCCGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFDDGKV*CQSRSH
Trigger: ATGACTCCGGCTTTGACACAACACCTTACCATCATC...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGAGATGATGGTAAGGTGTaGTGTCAAAGCCGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: RQYSESKTIDRVLHVILGDDGKV*CQSRSH
Trigger: ATGACTCCGGCTTTGACACAACACCTTACCATCATC...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTACCAGGTTTAATGCTTaGTGGAAGCCATCATGGCAT +
Preference number: 5 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASTRFNA*WKPSWH
Trigger: ATGCCATGATGGCTTCCACAAAGCATTAAACCTGGT...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGTGTTGTCCGTTGCTTaGAGTCCTTTGAGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASVLSVA*SPLSCF
Trigger: AAAGCAACTCAAAGGACTCAAAGCAACGGACAACAC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCAAGACAACTCTTGTGTaGTCCGTTGCTTTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVKTTLV*SVALSP
Trigger: AGGACTCAAAGCAACGGACAACACAAGAGTTGTCTT...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTGCCTCTTACATCTCTGTGTGTGGCAGCAAAATGGAGTCTCAGCAACCAGGCATGTATGGAGGATGAATaGATACTTGAGGTAAACAGA +
Preference number: 5 (lower is better)
Translates to: LPLTSLCVAAKWSLSNQACMEDE*ILEVNR
Trigger: TCTGTTTACCTCAAGTATCAATTCATCCTCCATACA...TGCCTGGTTGCTGAGACTCCATTTTGCTGCCACACACAGAGATGTAAGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TCTCAGCAACCAGGCAGGAAAATGACACAAATCCTGCAGCAGGGTCAATGGCAGTCCCTCCGAGTTTATTaGAAATCTTTAAGGATAGCA +
Preference number: 5 (lower is better)
Translates to: SQQPGRKMTQILQQGQWQSLRVY*KSLRIA
Trigger: TGCTATCCTTAAAGATTTCAAATAAACTCGGAGGGA...CTGCCATTGACCCTGCTGCAGGATTTGTGTCATTTTCCTGCCTGGTTGCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGTGTGGCCCTCTTATTTaGTGCACCTGCAAGTTCACT +
Preference number: 5 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVACGPLI*CTCKFT
Trigger: AGTGAACTTGCAGGTGCACAAAATAAGAGGGCCACA...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTACCTTCTCTCTTAAGTaGTTGATCTCTTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFTFSLK*LISSES
Trigger: GCTCTCTGAAGAGATCAACAACTTAAGAGAGAAGGT...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGGCCGGTCATCATGCTaGTCACGAAGCAGACACGGA +
Preference number: 5 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFGRSSC*SRSRHG
Trigger: TCCGTGTCTGCTTCGTGACAAGCATGATGACCGGCC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTAGTATTGGCCAGTCCTaGATTCTTAGAGGAATTCCA +
Preference number: 5 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFSIGQS*ILRGIP
Trigger: TGGAATTCCTCTAAGAATCAAGGACTGGCCAATACT...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCATATGTGGGGTATGTTaGGTATCCAGGTATTTGAGG +
Preference number: 5 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVICGVC*VSRYLR
Trigger: CCTCAAATACCTGGATACCAAACATACCCCACATAT...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCATTGGCAAATACTCTGTaGCTCTCAGAAAATGTTGAA +
Preference number: 5 (lower is better)
Translates to: GRMETESHQMTAPLGDLPLANTL*LSENVE
Trigger: TTCAACATTTTCTGAGAGCAACAGAGTATTTGCCAA...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGATGGTGATGGAGGTTTaGGCAGGTAAAACCCAGACT +
Preference number: 5 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVAMVMEV*AGKTQT
Trigger: AGTCTGGGTTTTACCTGCCAAAACCTCCATCACCAT...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCACTGCACCGATAATTTaGGCTTCCTTAATAAGGCCT +
Preference number: 5 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVTAPII*ASLIRP
Trigger: AGGCCTTATTAAGGAAGCCAAAATTATCGGTGCAGT...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTACTGCACCGATAATTTaGGCTTCCTTAATAAGGCCT +
Preference number: 5 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASTAPII*ASLIRP
Trigger: AGGCCTTATTAAGGAAGCCAAAATTATCGGTGCAGT...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGCCATGGAAATGGAGTTaGAAGACGGTGAAGTTTCTA +
Preference number: 5 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLPWKWS*KTVKFL
Trigger: TAGAAACTTCACCGTCTTCAAACTCCATTTCCATGG...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCCCATGGAAATGGAGTTaGAAGACGGTGAAGTTTCTA +
Preference number: 5 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVPWKWS*KTVKFL
Trigger: TAGAAACTTCACCGTCTTCAAACTCCATTTCCATGG...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTCTTGTCGTTGGTGAACTTCTCCAGACTTTTGCTTGCAGTGGTGGCAAATGTCGATTTTGGAGTCCTTTaGATGTGCTACTCTTTAGCC +
Preference number: 5 (lower is better)
Translates to: FLSLVNFSRLLLAVVANVDFGVL*MCYSLA
Trigger: GGCTAAAGAGTAGCACATCAAAAGGACTCCAAAATC...GACATTTGCCACCACTGCAAGCAAAAGTCTGGAGAAGTTCACCAACGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CTCGTCTCCCCCTCCATAAAGAAATCAGCATTTCCTGCGTTTGTATCAGCTTCTGATTTTGGAGTCCTTTaGATGTGCTACTCTTTAGCC +
Preference number: 5 (lower is better)
Translates to: LVSPSIKKSAFPAFVSASDFGVL*MCYSLA
Trigger: GGCTAAAGAGTAGCACATCAAAAGGACTCCAAAATC...AGAAGCTGATACAAACGCAGGAAATGCTGATTTCTTTATGGAGGGGGAGACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTGAGGCTTTTCATCCATaGGCAGCTTCACATCAGCTC +
Preference number: 5 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSEAFHP*AASHQL
Trigger: GAGCTGATGTGAAGCTGCCAATGGATGAAAAGCCTC...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CGGCAGTATTCAGAATCAAAGACGATAGATCGAGTGCTCCATGTGATATTGGGAGTTGCTTTGAGTCCTTaGAGTTGCTTTCTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: RQYSESKTIDRVLHVILGVALSP*SCFLRL
Trigger: AAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAAC...TCCCAATATCACATGGAGCACTCGATCTATCGTCTTTGATTCTGAATACTGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCAAGACAACTCTTGTGTaGTCCGTTGCTTTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLKTTLV*SVALSP
Trigger: AGGACTCAAAGCAACGGACAACACAAGAGTTGTCTT...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGAAGAATGGAGACTGAGTCACATCAAATGACAGCACCTCTCGGTGATCTCCCATGTATGGAGGATGAATaGATACTTGAGGTAAACAGA +
Preference number: 5 (lower is better)
Translates to: GRMETESHQMTAPLGDLPCMEDE*ILEVNR
Trigger: TCTGTTTACCTCAAGTATCAATTCATCCTCCATACA...TGGGAGATCACCGAGAGGTGCTGTCATTTGATGTGACTCAGTCTCCATTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTCCCCGGCGAAGACTTaGAGGCCTTGGCAGGACAAT +
Preference number: 5 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFSPAKT*RPWQDN
Trigger: ATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGGGA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612941.2
ENST00000617526.4
CDS-3UTR CAA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTACCTTCTCTCTTAAGTaGTTGATCTCTTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFTFSLK*LISSES
Trigger: GCTCTCTGAAGAGATCAACAACTTAAGAGAGAAGGT...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGTAATACCTCACTGGTaGGTAAACTCTGTATCCATC +
Preference number: 5 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLVIPHW*VNSVSI
Trigger: GATGGATACAGAGTTTACCAACCAGTGAGGTATTAC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCCTTCACCTGGAGAACTaGGGCTCCATTAGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: DIHHVVFYCSNCALAIKALHLEN*GSIRCN
Trigger: ATTGCACCTAATGGAGCCCAAGTTCTCCAGGTGAAG...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCATGAGAGATCATTTATaGGCAAATACTCTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTMRDHL*ANTLLL
Trigger: GAGCAACAGAGTATTTGCCAATAAATGATCTCTCAT...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTACGTTGCCAGGTGTGCTTGTTTGAGTCCTTTGAGTaGCTTTCTGAGGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: LVSRYLRYEFSVRCQVCLFESFE*LSEAFH
Trigger: ATGAAAAGCCTCAGAAAGCAACTCAAAGGACTCAAA...CAAGCACACCTGGCAACGTACACTGAATTCGTACCTCAAATACCTGGATACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp GATGGTAAGGTGTTGTGTCAAAGCCGGAGTCATTGGGTACATGTGATTTGCACCGAGATATACACCATGTaGTTTTCTACTGCTCAAACT +
Preference number: 5 (lower is better)
Translates to: DGKVLCQSRSHWVHVICTEIYTM*FSTAQT
Trigger: AGTTTGAGCAGTAGAAAACAACATGGTGTATATCTC...GGTGCAAATCACATGTACCCAATGACTCCGGCTTTGACACAACACCTTACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCAGGGACTTTCTGAGTaGTTAACCCACAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSQGLSE*LTHSSI
Trigger: TATGCTGCTGTGGGTTAACAACTCAGAAAGTCCCTG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCTGTGGCCCTCTTATTTaGTGCACCTGCAAGTTCACT +
Preference number: 5 (lower is better)
Translates to: DIHHVVFYCSNCALAIKACGPLI*CTCKFT
Trigger: AGTGAACTTGCAGGTGCACAAAATAAGAGGGCCACA...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CGGCATATGTGGGGTATGTTTGGTATCCAGGTATTTGAGGTACGAATTCAGTGTTCTCTGTTGTCAATCTaGGAACTGTCTGTATCTGAT +
Preference number: 5 (lower is better)
Translates to: RHMWGMFGIQVFEVRIQCSLLSI*ELSVSD
Trigger: ATCAGATACAGACAGTTCCAAGATTGACAACAGAGA...ACACTGAATTCGTACCTCAAATACCTGGATACCAAACATACCCCACATATGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTCTCTGTTGTCAATCTaGGAACTGTCTGTATCTGAT +
Preference number: 5 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFSLLSI*ELSVSD
Trigger: ATCAGATACAGACAGTTCCAAGATTGACAACAGAGA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTACTTCGTTCGGTCATGTaGGGGACACACGCACTCTTA +
Preference number: 5 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLLRSVM*GTHALL
Trigger: TAAGAGTGCGTGTGTCCCCAACATGACCGAACGAAG...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTACCTTCTCTCTTAAGTaGTTGATCTCTTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTTFSLK*LISSES
Trigger: GCTCTCTGAAGAGATCAACAACTTAAGAGAGAAGGT...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AATACCTCACTGGTTGGTAAACTCTGTATCCATCTACTGGATAATAGAGTGGCGACCTTCTCTCTTAAGTaGTTGATCTCTTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: NTSLVGKLCIHLLDNRVATFSLK*LISSES
Trigger: GCTCTCTGAAGAGATCAACAACTTAAGAGAGAAGGT...CGCCACTCTATTATCCAGTAGATGGATACAGAGTTTACCAACCAGTGAGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS-3UTR CAA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGAAGACTTTGAGGCCTaGGCAGGACAATTGTCAGCG +
Preference number: 5 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFEDFEA*AGQLSA
Trigger: CGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTTGGTATCCAGGTATTaGAGGTACGAATTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLLVSRY*RYEFSV
Trigger: TACACTGAATTCGTACCTCAAATACCTGGATACCAA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GGGCTGAAGACAACTCTTGTGTTGTCCGTTGCTTTGAGTCCTTTGAGTTGCTTTTTGGCAAATACTCTGTaGCTCTCAGAAAATGTTGAA +
Preference number: 5 (lower is better)
Translates to: GLKTTLVLSVALSPLSCFLANTL*LSENVE
Trigger: TTCAACATTTTCTGAGAGCAACAGAGTATTTGCCAA...AAAGCAACTCAAAGGACTCAAAGCAACGGACAACACAAGAGTTGTCTTCAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCATGGTGATGGAGGTTTaGGCAGGTAAAACCCAGACT +
Preference number: 5 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAMVMEV*AGKTQT
Trigger: AGTCTGGGTTTTACCTGCCAAAACCTCCATCACCAT...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCTGCTCAAACTGTGCTTaGGCAATTAAAGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: DIHHVVFYCSNCALAIKACSNCA*AIKACL
Trigger: GAGGCAGGCTTTAATTGCCAAAGCACAGTTTGAGCA...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AGAATACATCCGGCAGTGGTAGCGGCAGTATTCAGAATCAAAGACGATAGATCGTTCATGTCAGGCAATTaGAGATATACACCATGTTGT +
Preference number: 5 (lower is better)
Translates to: RIHPAVVAAVFRIKDDRSFMSGN*RYTPCC
Trigger: ACAACATGGTGTATATCTCAAATTGCCTGACATGAA...CGATCTATCGTCTTTGATTCTGAATACTGCCGCTACCACTGCCGGATGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482108.1
ENST00000615790.5
CDS-3UTR CAA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCTTCGCTCTAAATAAGTaGGTCTCCCTGCAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAFALNK*VSLQFP
Trigger: AGGGAACTGCAGGGAGACCAACTTATTTAGAGCGAA...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCGCAATCATAAGAAACTaGCAGTTTCCACCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAAIIRN*QFPPPL
Trigger: AAGAGGGGGTGGAAACTGCAAGTTTCTTATGATTGC...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp CATATGGAGGCAGACACATGGATAGATTCTTCCAAAACGTCAGCTGGTGCTTTTTTGGCAAATACTCTGTaGCTCTCAGAAAATGTTGAA +
Preference number: 5 (lower is better)
Translates to: HMEADTWIDSSKTSAGAFLANTL*LSENVE
Trigger: TTCAACATTTTCTGAGAGCAACAGAGTATTTGCCAA...AAAAGCACCAGCTGACGTTTTGGAAGAATCTATCCATGTGTCTGCCTCCATATG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTCAGCATTTCCTGCGTTaGTATCAGCTTCTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSQHFLR*YQLLCK
Trigger: TTTACAGAGAAGCTGATACAAACGCAGGAAATGCTG...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAGAGGCTTTTCATCCATaGGCAGCTTCACATCAGCTC +
Preference number: 5 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLEAFHP*AASHQL
Trigger: GAGCTGATGTGAAGCTGCCAATGGATGAAAAGCCTC...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGAGGCTTTTCATCCATaGGCAGCTTCACATCAGCTC +
Preference number: 5 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFEAFHP*AASHQL
Trigger: GAGCTGATGTGAAGCTGCCAATGGATGAAAAGCCTC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCGTGTTGTCCGTTGCTTaGAGTCCTTTGAGTTGCTTT +
Preference number: 5 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAVLSVA*SPLSCF
Trigger: AAAGCAACTCAAAGGACTCAAAGCAACGGACAACAC...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCGAGATATACACCATGTaGTTTTCTACTGCTCAAACT +
Preference number: 5 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLEIYTM*FSTAQT
Trigger: AGTTTGAGCAGTAGAAAACAACATGGTGTATATCTC...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TCCAGTGATTTAAAAAGAGGGTACCGAAACCGCAAGAAAAGTCATGTCCTCCTCTGTATGGAGGATGAATaGATACTTGAGGTAAACAGA +
Preference number: 5 (lower is better)
Translates to: SSDLKRGYRNRKKSHVLLCMEDE*ILEVNR
Trigger: TCTGTTTACCTCAAGTATCAATTCATCCTCCATACA...GAGGAGGACATGACTTTTCTTGCGGTTTCGGTACCCTCTTTTTAAATCACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTCTCTGTTGTCAATCTaGGAACTGTCTGTATCTGAT +
Preference number: 5 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSSLLSI*ELSVSD
Trigger: ATCAGATACAGACAGTTCCAAGATTGACAACAGAGA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AAATCATTTCTCCTCTCTCCACACATCCTAATGCTACAGTCTAATGAGGGGACTCATCTTTTACATTTCTaGCCACAAAATCTCGAAGAG +
Preference number: 5 (lower is better)
Translates to: KSFLLSPHILMLQSNEGTHLLHF*PQNLEE
Trigger: CTCTTCGAGATTTTGTGGCAAGAAATGTAAAAGATG...AGTCCCCTCATTAGACTGTAGCATTAGGATGTGTGGAGAGAGGAGAAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GATATACACCATGTTGTTTTCTACTGCTCAAACTGTGCTTTGGCAATTAAAGCCATATGTGGGGTATGTTaGGTATCCAGGTATTTGAGG +
Preference number: 5 (lower is better)
Translates to: DIHHVVFYCSNCALAIKAICGVC*VSRYLR
Trigger: CCTCAAATACCTGGATACCAAACATACCCCACATAT...GGCTTTAATTGCCAAAGCACAGTTTGAGCAGTAGAAAACAACATGGTGTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAGATGATGGTAAGGTGTaGTGTCAAAGCCGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLDDGKV*CQSRSH
Trigger: ATGACTCCGGCTTTGACACAACACCTTACCATCATC...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTGCTCAAACTGTGCTTaGGCAATTAAAGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFCSNCA*AIKACL
Trigger: GAGGCAGGCTTTAATTGCCAAAGCACAGTTTGAGCA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTACAGGGACTTTCTGAGTaGTTAACCCACAGCAGCATA +
Preference number: 5 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLQGLSE*LTHSSI
Trigger: TATGCTGCTGTGGGTTAACAACTCAGAAAGTCCCTG...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTAACCAGGTTTAATGCTTaGTGGAAGCCATCATGGCAT +
Preference number: 5 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLTRFNA*WKPSWH
Trigger: ATGCCATGATGGCTTCCACAAAGCATTAAACCTGGT...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGTTGCTTTGAGTCCTTaGAGTTGCTTTCTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFVALSP*SCFLRL
Trigger: AAGCCTCAGAAAGCAACTCAAAGGACTCAAAGCAAC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp TTATACAAATGCTCCAGTTCTGAGGAGCCTCTCATTCACAGCATTGTAAGAAGTTCCCTCCGAGTTTATTaGAAATCTTTAAGGATAGCA +
Preference number: 5 (lower is better)
Translates to: LYKCSSSEEPLIHSIVRSSLRVY*KSLRIA
Trigger: TGCTATCCTTAAAGATTTCAAATAAACTCGGAGGGA...ACTTCTTACAATGCTGTGAATGAGAGGCTCCTCAGAACTGGAGCATTTGTATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTGTAATACCTCACTGGTaGGTAAACTCTGTATCCATC +
Preference number: 5 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFVIPHW*VNSVSI
Trigger: GATGGATACAGAGTTTACCAACCAGTGAGGTATTAC...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTCAGCATTTCCTGCGTTaGTATCAGCTTCTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFQHFLR*YQLLCK
Trigger: TTTACAGAGAAGCTGATACAAACGCAGGAAATGCTG...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATTCTGGATAGTAAAATaGTTTGGAGCTCGGCAATCA +
Preference number: 5 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLFWIVK*FGARQS
Trigger: TGATTGCCGAGCTCCAAACAATTTTACTATCCAGAA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTTCTGGATAGTAAAATaGTTTGGAGCTCGGCAATCA +
Preference number: 5 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFFWIVK*FGARQS
Trigger: TGATTGCCGAGCTCCAAACAATTTTACTATCCAGAA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp AGCCTAAAATTTAGCACACAGTCACTGATTGAGAAGCTGAACAGGAATAAATTTTTCATGTCAGGCAATTaGAGATATACACCATGTTGT +
Preference number: 5 (lower is better)
Translates to: SLKFSTQSLIEKLNRNKFFMSGN*RYTPCC
Trigger: ACAACATGGTGTATATCTCAAATTGCCTGACATGAA...AAATTTATTCCTGTTCAGCTTCTCAATCAGTGACTGTGTGCTAAATTTTAGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS-3UTR CAA 90 bp GCCTCTCATTCACAGCATTGTAAGAAGTTCACAGTAAAGGAATATTTTACACTATGTATGGAGGATGAATaGATACTTGAGGTAAACAGA +
Preference number: 5 (lower is better)
Translates to: ASHSQHCKKFTVKEYFTLCMEDE*ILEVNR
Trigger: TCTGTTTACCTCAAGTATCAATTCATCCTCCATACA...TAGTGTAAAATATTCCTTTACTGTGAACTTCTTACAATGCTGTGAATGAGAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482108.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS GCA 72 bp GGTCCCACACCTGAGCCAGGCGCGGTCTCCACTGGGTaGTCCGCAGCCCGGAGTGGCTCCGGACGACAGCCC +
Preference number: 6 (lower is better)
Translates to: GPTPEPGAVSTG*SAARSGSGRQP
Trigger: GGGCTGTCGTCCGGAGCCACTCCGGGCTGCGGAGCACCCAGTGGAGACCGCGCCTGGCTCAGGTGTGGGACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000493935.1
ENST00000612748.1
ENST00000613043.1
CDS CCA 72 bp AGGCGCGGTCTCCACTGGGTGCTCCGCAGCCCGGAGTaGCTCCGGACGACAGCCCGCTCAGCGGACCTTTCG +
Preference number: 6 (lower is better)
Translates to: RRGLHWVLRSPE*LRTTARSADLS
Trigger: CGAAAGGTCCGCTGAGCGGGCTGTCGTCCGGAGCCACTCCGGGCTGCGGAGCACCCAGTGGAGACCGCGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000493935.1
ENST00000612748.1
ENST00000613043.1
CDS CAA 90 bp TGCGGGCACCTCCCACCGGCTCGGTTGGATCTACCTGGTGGTGGCTaGCAATGTGAGGCAACACCAGCGCCCGGGGTGGCGAGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: CGHLPPARLDLPGGG*QCEATPAPGVASVA
Trigger: AGCCACGCTCGCCACCCCGGGCGCTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAGGTGCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS TCA 72 bp GGCTCGGTTGGATCTACCTGGTGGTGGCTTGCAATGTaGGGCAACACCAGCGCCCGGGGTGGCGAGCGTGGC +
Preference number: 6 (lower is better)
Translates to: GSVGSTWWWLAM*GNTSARGGERG
Trigger: GCCACGCTCGCCACCCCGGGCGCTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAGATCCAACCGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CCA 72 bp CGACAGCCCGCTCAGCGGACCTTTCGCCAGGCTCGGTaGACCTTCTCCGCTGTTCTCCTCAGGGCGCAGTCA +
Preference number: 6 (lower is better)
Translates to: RQPAQRTFRQAR*TFSAVLLRAQS
Trigger: TGACTGCGCCCTGAGGAGAACAGCGGAGAAGGTCCACCGAGCCTGGCGAAAGGTCCGCTGAGCGGGCTGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000493935.1
ENST00000612748.1
ENST00000613043.1
CDS CAA 72 bp CTCCCACCGGCTCGGTTGGATCTACCTGGTGGTGGCTaGCAATGTGAGGCAACACCAGCGCCCGGGGTGGCG +
Preference number: 6 (lower is better)
Translates to: LPPARLDLPGGG*QCEATPAPGVA
Trigger: CGCCACCCCGGGCGCTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS GCA 72 bp TCCCACCGGCTCGGTTGGATCTACCTGGTGGTGGCTTaGAATGTGAGGCAACACCAGCGCCCGGGGTGGCGA +
Preference number: 6 (lower is better)
Translates to: SHRLGWIYLVVA*NVRQHQRPGWR
Trigger: TCGCCACCCCGGGCGCTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 72 bp GCGTCAGGCGCATGCGGGCACCTCCCACCGGCTCGGTaGGATCTACCTGGTGGTGGCTTGCAATGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: ASGACGHLPPAR*DLPGGGLQCEA
Trigger: TGCCTCACATTGCAAGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAGGTGCCCGCATGCGCCTGACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS TCA 72 bp CAGCGGGGCCGGGGAGTTTCCCGCCGGCGAAGACTTTaGGGCCTTGGCAGGACAATTGTCAGCGTAGTGACC +
Preference number: 6 (lower is better)
Translates to: QRGRGVSRRRRL*GLGRTIVSVVT
Trigger: GGTCACTACGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCGGGAAACTCCCCGGCCCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS CCA 72 bp CGTCAGGCGCATGCGGGCACCTCCCACCGGCTCGGTTaGATCTACCTGGTGGTGGCTTGCAATGTGAGGCAA +
Preference number: 6 (lower is better)
Translates to: RQAHAGTSHRLG*IYLVVACNVRQ
Trigger: TTGCCTCACATTGCAAGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAGGTGCCCGCATGCGCCTGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 90 bp TTTCTTCCTGCGTCAGGCGCATGCGGGCACCTCCCACCGGCTCGGTaGGATCTACCTGGTGGTGGCTTGCAATGTGAGGCAACACCAGCG +
Preference number: 6 (lower is better)
Translates to: FLPASGACGHLPPAR*DLPGGGLQCEATPA
Trigger: CGCTGGTGTTGCCTCACATTGCAAGCCACCACCAGGTAGATCCAACCGAGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGGAAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 90 bp GGTCCCTCTACAGCGGGGCCGGGGAGTTTCCCGCCGGCGAAGACTTaGAGGCCTTGGCAGGACAATTGTCAGCGTAGTGACCTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: GPSTAGPGSFPPAKT*RPWQDNCQRSDLLF
Trigger: GAACAGGAGGTCACTACGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCGGGAAACTCCCCGGCCCCGCTGTAGAGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS TCA 72 bp GTTGTGCATCAGGTAGTGGGAGCGCTCCAGCTTTGCTaGGGCCCAACGGGCAGCACGGCCGGTCATCATGCT +
Preference number: 6 (lower is better)
Translates to: VVHQVVGALQLC*GPTGSTAGHHA
Trigger: AGCATGATGACCGGCCGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGCTCCCACTACCTGATGCACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS TCA 72 bp CCTCGAGGTGGGAGAGCTCCTCCTGAATGTGGTCGCTaGGGCCCTCGTGGTACTGGTCAATCAGCGCAGGCT +
Preference number: 6 (lower is better)
Translates to: PRGGRAPPECGR*GPRGTGQSAQA
Trigger: AGCCTGCGCTGATTGACCAGTACCACGAGGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCACCTCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS TCA 72 bp AGCGACTTGGCGACCTCGAGGTGGGAGAGCTCCTCCTaGATGTGGTCGCTGAGGCCCTCGTGGTACTGGTCA +
Preference number: 6 (lower is better)
Translates to: SDLATSRWESSS*MWSLRPSWYWS
Trigger: TGACCAGTACCACGAGGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCACCTCGAGGTCGCCAAGTCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS GCA 72 bp GCACTCTTCCTCTATTGGAGGGGGTGGGGCAGCAGCTaGTGCAGCACCGCGGAGCTCGATGTCATCATCCTC +
Preference number: 6 (lower is better)
Translates to: ALFLYWRGWGSS*CSTAELDVIIL
Trigger: GAGGATGATGACATCGAGCTCCGCGGTGCTGCAGCAGCTGCTGCCCCACCCCCTCCAATAGAGGAAGAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 72 bp ACAGCGGGGCCGGGGAGTTTCCCGCCGGCGAAGACTTaGAGGCCTTGGCAGGACAATTGTCAGCGTAGTGAC +
Preference number: 6 (lower is better)
Translates to: TAGPGSFPPAKT*RPWQDNCQRSD
Trigger: GTCACTACGCTGACAATTGTCCTGCCAAGGCCTCAAAGTCTTCGCCGGCGGGAAACTCCCCGGCCCCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000615790.5
CDS GCA 72 bp TTGCTGAGGCCCAACGGGCAGCACGGCCGGTCATCATaGTTGTCACGAAGCAGACACGGACACGATCAACTG +
Preference number: 6 (lower is better)
Translates to: LLRPNGQHGRSS*LSRSRHGHDQL
Trigger: CAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAGCATGATGACCGGCCGTGCTGCCCGTTGGGCCTCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CCA 72 bp GTCTGGGTTGCCATCGAACTTCTCTGGGAGGTCTTCTaGGCACTCTTCCTCTATTGGAGGGGGTGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: VWVAIELLWEVF*ALFLYWRGWGS
Trigger: GCTGCCCCACCCCCTCCAATAGAGGAAGAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGCAACCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 72 bp CTGAGGCCCAACGGGCAGCACGGCCGGTCATCATGCTaGTCACGAAGCAGACACGGACACGATCAACTGAGA +
Preference number: 6 (lower is better)
Translates to: LRPNGQHGRSSC*SRSRHGHDQLR
Trigger: TCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAGCATGATGACCGGCCGTGCTGCCCGTTGGGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 90 bp CCAGCTTTGCTGAGGCCCAACGGGCAGCACGGCCGGTCATCATGCTaGTCACGAAGCAGACACGGACACGATCAACTGAGAAATCCCTGG +
Preference number: 6 (lower is better)
Translates to: PALLRPNGQHGRSSC*SRSRHGHDQLRNPW
Trigger: CCAGGGATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAGCATGATGACCGGCCGTGCTGCCCGTTGGGCCTCAGCAAAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS GCA 72 bp TTCTGCGTCTTTCTTTTTCTTCCTGCGTCAGGCGCATaGGGGCACCTCCCACCGGCTCGGTTGGATCTACCT +
Preference number: 6 (lower is better)
Translates to: FCVFLFLPASGA*GHLPPARLDLP
Trigger: AGGTAGATCCAACCGAGCCGGTGGGAGGTGCCCGCATGCGCCTGACGCAGGAAGAAAAAGAAAGACGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS GCA 72 bp CGCTTATTTCGCATACTCACCACGCGAGGACTCCTCTaGGAAGACAGGAAGGATGGGGTCCCACACCTGAGC +
Preference number: 6 (lower is better)
Translates to: RLFRILTTRGLL*EDRKDGVPHLS
Trigger: GCTCAGGTGTGGGACCCCATCCTTCCTGTCTTCGCAGAGGAGTCCTCGCGTGGTGAGTATGCGAAATAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488574.5
ENST00000612748.1
CDS CCA 72 bp CGCGGAGCTCGATGTCATCATCCTCATCCTCAGGGGTaGGTTCCACTTGCTCTCGAAGGGTGGTGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: RGARCHHPHPQG*VPLALEGWCSP
Trigger: AGGAGAACACCACCCTTCGAGAGCAAGTGGAACCCACCCCTGAGGATGAGGATGATGACATCGAGCTCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS TCA 72 bp CGCAGTCAGGTTTCTTCGACACACACCAACCGAAGTTaGAGCGCGTGTACCAGGAGCGCAGACTGTGAGCCT +
Preference number: 6 (lower is better)
Translates to: RSQVSSTHTNRS*SACTRSADCEP
Trigger: AGGCTCACAGTCTGCGCTCCTGGTACACGCGCTTCAACTTCGGTTGGTGTGTGTCGAAGAAACCTGACTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482108.1
CDS CCA 72 bp CTTCAGAGAGCTCGTCCCTTCTTCGTTCGGTCATGTTaGGGACACACGCACTCTTATGGCCGGTGTGCTTGG +
Preference number: 6 (lower is better)
Translates to: LQRARPFFVRSC*GHTHSYGRCAW
Trigger: CCAAGCACACCGGCCATAAGAGTGCGTGTGTCCCCAACATGACCGAACGAAGAAGGGACGAGCTCTCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000613043.1
ENST00000615790.5
ENST00000617526.4
CDS CCA 72 bp GATCTGGCACTGGGCCATGAAAGGAGCCAGCATGTCTaGGTTGCCATCGAACTTCTCTGGGAGGTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: DLALGHERSQHV*VAIELLWEVFW
Trigger: CCAGAAGACCTCCCAGAGAAGTTCGATGGCAACCCAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 72 bp TCTTCAGAGAGCTCGTCCCTTCTTCGTTCGGTCATGTaGGGGACACACGCACTCTTATGGCCGGTGTGCTTG +
Preference number: 6 (lower is better)
Translates to: SSESSSLLRSVM*GTHALLWPVCL
Trigger: CAAGCACACCGGCCATAAGAGTGCGTGTGTCCCCAACATGACCGAACGAAGAAGGGACGAGCTCTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000613043.1
ENST00000615790.5
ENST00000617526.4
CDS CAA 72 bp GAAAGCATTGGAGTAGTCGATGACAGACCCCATGCCTaGGCGCAGGCGTCTGATCTTGCGTTTGGCAACCTC +
Preference number: 6 (lower is better)
Translates to: ESIGVVDDRPHA*AQASDLAFGNL
Trigger: GAGGTTGCCAAACGCAAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGTCATCGACTACTCCAATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 90 bp ATGAAGATCTGGCACTGGGCCATGAAAGGAGCCAGCATGTCTGGGTaGCCATCGAACTTCTCTGGGAGGTCTTCTGGGCACTCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: MKIWHWAMKGASMSG*PSNFSGRSSGHSSS
Trigger: AGAGGAAGAGTGCCCAGAAGACCTCCCAGAGAAGTTCGATGGCAACCCAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGATCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 90 bp AATCATCTGGAAAGCATTGGAGTAGTCGATGACAGACCCCATGCCTaGGCGCAGGCGTCTGATCTTGCGTTTGGCAACCTCTCGCCTCTG +
Preference number: 6 (lower is better)
Translates to: NHLESIGVVDDRPHA*AQASDLAFGNLSPL
Trigger: CAGAGGCGAGAGGTTGCCAAACGCAAGATCAGACGCCTGCGCCAAGGCATGGGGTCTGTCATCGACTACTCCAATGCTTTCCAGATGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS TCA 72 bp GTTCCACTTGCTCTCGAAGGGTGGTGTTCTCCTCTGTaGGCTTCTGCACCTGGCTCTGCAGGTTGTTGTTCT +
Preference number: 6 (lower is better)
Translates to: VPLALEGWCSPL*ASAPGSAGCCS
Trigger: AGAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGAGAACACCACCCTTCGAGAGCAAGTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS GCA 72 bp AGGTCTGATGGTTTTATTATCACGCGAGGACTCCTCTaGGAAGACAGGAAGGATGGGGTCCCACACCTGAGC +
Preference number: 6 (lower is better)
Translates to: RSDGFIITRGLL*EDRKDGVPHLS
Trigger: GCTCAGGTGTGGGACCCCATCCTTCCTGTCTTCGCAGAGGAGTCCTCGCGTGATAATAAAACCATCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613043.1
CDS CCA 72 bp ACTGAGAAATCCCTGGTGCTCTTTTCCATGAAGATCTaGCACTGGGCCATGAAAGGAGCCAGCATGTCTGGG +
Preference number: 6 (lower is better)
Translates to: TEKSLVLFSMKI*HWAMKGASMSG
Trigger: CCCAGACATGCTGGCTCCTTTCATGGCCCAGTGCCAGATCTTCATGGAAAAGAGCACCAGGGATTTCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 72 bp TTCTCCTCTGTGAGCTTCTGCACCTGGCTCTGCAGGTaGTTGTTCTCCTCCGACTGCTTCATGACCTTCTCT +
Preference number: 6 (lower is better)
Translates to: FSSVSFCTWLCR*LFSSDCFMTFS
Trigger: AGAGAAGGTCATGAAGCAGTCGGAGGAGAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 90 bp TTGTTGATCTCTTCAGAGAGCTCGTCCCTTCTTCGTTCGGTCATGTaGGGGACACACGCACTCTTATGGCCGGTGTGCTTGGAGTTGTTG +
Preference number: 6 (lower is better)
Translates to: LLISSESSSLLRSVM*GTHALLWPVCLELL
Trigger: CAACAACTCCAAGCACACCGGCCATAAGAGTGCGTGTGTCCCCAACATGACCGAACGAAGAAGGGACGAGCTCTCTGAAGAGATCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000613043.1
ENST00000615790.5
ENST00000617526.4
CDS CAA 90 bp GTGGTGTTCTCCTCTGTGAGCTTCTGCACCTGGCTCTGCAGGTTGTaGTTCTCCTCCGACTGCTTCATGACCTTCTCTCTTAAGTTGTTG +
Preference number: 6 (lower is better)
Translates to: VVFSSVSFCTWLCRL*FSSDCFMTFSLKLL
Trigger: CAACAACTTAAGAGAGAAGGTCATGAAGCAGTCGGAGGAGAACAACAACCTGCAGAGCCAGGTGCAGAAGCTCACAGAGGAGAACACCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS TCA 72 bp ACGGCCACTAAGTGGGGCTTTATTGAAGCCCAGGTCTaGTGGTTTTATTATCACGCGAGGACTCCTCTGCGA +
Preference number: 6 (lower is better)
Translates to: TATKWGFIEAQV*WFYYHARTPLR
Trigger: TCGCAGAGGAGTCCTCGCGTGATAATAAAACCATCAGACCTGGGCTTCAATAAAGCCCCACTTAGTGGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613043.1
CDS CCA 72 bp CTTCGTTCGGTCATGTTGGGGACACACGCACTCTTATaGCCGGTGTGCTTGGAGTTGTTGTTGTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: LRSVMLGTHALL*PVCLELLLLLL
Trigger: CAACAACAACAACAACAACTCCAAGCACACCGGCCATAAGAGTGCGTGTGTCCCCAACATGACCGAACGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000613043.1
ENST00000615790.5
ENST00000617526.4
CDS TCA 72 bp CATGCTTGTCACGAAGCAGACACGGACACGATCAACTaGGAAATCCCTGGTGCTCTTTTCCATGAAGATCTG +
Preference number: 6 (lower is better)
Translates to: HACHEADTDTIN*EIPGALFHEDL
Trigger: CAGATCTTCATGGAAAAGAGCACCAGGGATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS GCA 72 bp TGCACCTGGCTCTGCAGGTTGTTGTTCTCCTCCGACTaGTTCATGACCTTCTCTCTTAAGTTGTTGATCTCT +
Preference number: 6 (lower is better)
Translates to: CTWLCRLLFSSD*FMTFSLKLLIS
Trigger: AGAGATCAACAACTTAAGAGAGAAGGTCATGAAGCAGTCGGAGGAGAACAACAACCTGCAGAGCCAGGTGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000615790.5
ENST00000617526.4
CDS CAA 90 bp AGGTTGTTGTTCTCCTCCGACTGCTTCATGACCTTCTCTCTTAAGTaGTTGATCTCTTCAGAGAGCTCGTCCCTTCTTCGTTCGGTCATG +
Preference number: 6 (lower is better)
Translates to: RLLFSSDCFMTFSLK*LISSESSSLLRSVM
Trigger: CATGACCGAACGAAGAAGGGACGAGCTCTCTGAAGAGATCAACAACTTAAGAGAGAAGGTCATGAAGCAGTCGGAGGAGAACAACAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000613043.1
ENST00000615790.5
ENST00000617526.4
CDS CAA 72 bp TTCTCCTCCGACTGCTTCATGACCTTCTCTCTTAAGTaGTTGATCTCTTCAGAGAGCTCGTCCCTTCTTCGT +
Preference number: 6 (lower is better)
Translates to: FSSDCFMTFSLK*LISSESSSLLR
Trigger: ACGAAGAAGGGACGAGCTCTCTGAAGAGATCAACAACTTAAGAGAGAAGGTCATGAAGCAGTCGGAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000612941.2
ENST00000613043.1
ENST00000615790.5
ENST00000617526.4