RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PEAR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000187800

Ensembl transcript IDs: ENST00000292357.7, ENST00000292357.8, ENST00000338302.7, ENST00000444016.5, ENST00000455314.5, ENST00000465101.1, ENST00000469390.5, ENST00000482505.1

Found 395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGTCGTCGCCCCGCCAGCCTGGCACACATTGGCACTGATTGGGTaGCACACAACGGCCATGGACACACTCCTGGGCACAGAGCGGGAC +
Preference number: 1 (lower is better)
Translates to: TVVAPPAWHTLALIG*HTTAMDTLLGTERD
Trigger: GTCCCGCTCTGTGCCCAGGAGTGTGTCCATGGCCGTTGTGTGGCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR TCA 90 bp CCATGGCAGCACTGCAGGCGCTGGCGGTGGTCCGTCTTCACCACCTaGCGGTACACGGTCCGGTATACAACCCCGACACAGACCATGCAG +
Preference number: 1 (lower is better)
Translates to: PWQHCRRWRWSVFTT*RYTVRYTTPTQTMQ
Trigger: CTGCATGGTCTGTGTCGGGGTTGTATACCGGACCGTGTACCGTCAGGTGGTGAAGACGGACCACCGCCAGCGCCTGCAGTGCTGCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR GCA 90 bp CAGGCGAGTGGGGGAGGAAGGGCACTCCAGGTGTGCAGGTCCCTGTaGCAGAAAGAAGAGTGGCCTACAGGAGGACCTAGAGGCCGGTGT +
Preference number: 1 (lower is better)
Translates to: QASGGGRALQVCRSL*QKEEWPTGGPRGRC
Trigger: ACACCGGCCTCTAGGTCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGCCCTTCCTCCCCCACTCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR CCA 90 bp GGAAGGGCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTaGCCTACAGGAGGACCTAGAGGCCGGTGTGACTGGCGTGCAGTG +
Preference number: 1 (lower is better)
Translates to: GRALQVCRSLCQKEE*PTGGPRGRCDWRAV
Trigger: CACTGCACGCCAGTCACACCGGCCTCTAGGTCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGCCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR CCA 90 bp CATTCCTGGGGCACACTCACTGGAACAGTCGTCGCCCCGCCAGCCTaGCACACATTGGCACTGATTGGGTGCCACACAACGGCCATGGAC +
Preference number: 1 (lower is better)
Translates to: HSWGTLTGTVVAPPA*HTLALIGCHTTAMD
Trigger: GTCCATGGCCGTTGTGTGGCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGTTCCAGTGAGTGTGCCCCAGGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR CCA 90 bp CAGAAAGAAGAGTGGCCTACAGGAGGACCTAGAGGCCGGTGTGACTaGCGTGCAGTGACAGGAACACAGTTCAAGGTGAGGCTGGAGAGA +
Preference number: 1 (lower is better)
Translates to: QKEEWPTGGPRGRCD*RAVTGTQFKVRLER
Trigger: TCTCTCCAGCCTCACCTTGAACTGTGTTCCTGTCACTGCACGCCAGTCACACCGGCCTCTAGGTCCTCCTGTAGGCCACTCTTCTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR TCA 90 bp TTAAAGAAGTGCCTGGCACCCTGTAGGCCTTCTGCAGGTACCTGGTaGGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTACGGAGG +
Preference number: 1 (lower is better)
Translates to: LKKCLAPCRPSAGTW*VNTAAIRAVKDVRR
Trigger: CCTCCGTACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAAGGCCTACAGGGTGCCAGGCACTTCTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR GCA 90 bp TGGCACCTTCCCACACCTGAGCTCTGCGTTGTTACCCTGGGGAAATaGCACCCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGT +
Preference number: 1 (lower is better)
Translates to: WHLPTPELCVVTLGK*HPLGKSPTYSVCNC
Trigger: ACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTGTGGGAAGGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR GCA 90 bp GCTAGAGTTAATTGGGTTGGTTCCATCTCCCTACTAAATGGTAAGTaGCCTAGGACAGAACCTGTGCCTGGTACCCTTCTAAAATCACAG +
Preference number: 1 (lower is better)
Translates to: ARVNWVGSISLLNGK*PRTEPVPGTLLKSQ
Trigger: CTGTGATTTTAGAAGGGTACCAGGCACAGGTTCTGTCCTAGGGCACTTACCATTTAGTAGGGAGATGGAACCAACCCAATTAACTCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR CCA 90 bp GAGCATACAGATGGCTCATCTATCTTAGCAGTTACTGCATGTCACTaGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTG +
Preference number: 1 (lower is better)
Translates to: EHTDGSSILAVTACH*YLIQSATQPFGEHL
Trigger: CAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACATGCAGTAACTGCTAAGATAGATGAGCCATCTGTATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR CCA 90 bp TATTTTGAAATTATGAGCCATGCATTGGAAGGTTCACTGAATCAATaGAGGAGGCCAGTTAGGAGGCTATTGCTAGAGTTAATTGGGTTG +
Preference number: 1 (lower is better)
Translates to: YFEIMSHALEGSLNQ*RRPVRRLLLELIGL
Trigger: CAACCCAATTAACTCTAGCAATAGCCTCCTAACTGGCCTCCTCCATTGATTCAGTGAACCTTCCAATGCATGGCTCATAATTTCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR CCA 90 bp GGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATaGCTCATCTATCTTAGCAGTTACTGCATGTCACTGGTACTTAAT +
Preference number: 1 (lower is better)
Translates to: GSLQLIQSVTVRAYR*LIYLSSYCMSLVLN
Trigger: ATTAAGTACCAGTGACATGCAGTAACTGCTAAGATAGATGAGCCATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp CCCACATTCCTGGGGCACACTCACTGGAACAGTCGTCGCCCCGCCAGCCTGGCACAGCACTGCAGGCGCTaGCGGTGGTCCGTCTTCACC +
Preference number: 2 (lower is better)
Translates to: PTFLGHTHWNSRRPASLAQHCRR*RWSVFT
Trigger: GGTGAAGACGGACCACCGCCAGCGCCTGCAGTGCTG...TGCCAGGCTGGCGGGGCGACGACTGTTCCAGTGAGTGTGCCCCAGGAATGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR-3UTR GCA 90 bp GCCCCGCCAGCCTGGCACACATTGGCACTGATTGGGTGCCACACAACGGCCATGAAGCCATGGCAGCACTaGAGGCGCTGGCGGTGGTCC +
Preference number: 2 (lower is better)
Translates to: APPAWHTLALIGCHTTAMKPWQH*RRWRWS
Trigger: GGACCACCGCCAGCGCCTGCAGTGCTGCCATGGCTT...CATGGCCGTTGTGTGGCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR-3UTR CCA 90 bp ACAGTCGTCGCCCCGCCAGCCTGGCACACATTGGCACTGATTGGGTGCCACACACCATGGACACACTCCTaGGCACAGAGCGGGACACAG +
Preference number: 2 (lower is better)
Translates to: TVVAPPAWHTLALIGCHTPWTHS*AQSGTQ
Trigger: CTGTGTCCCGCTCTGTGCCCAGGAGTGTGTCCATGG...TGTGTGGCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR-3UTR TCA 90 bp ACTGGAACAGTCGTCGCCCCGCCAGCCTGGCACACATTGGCACTGATTGGGTGCTCCGTCTTCACCACCTaGCGGTACACGGTCCGGTAT +
Preference number: 2 (lower is better)
Translates to: TGTVVAPPAWHTLALIGCSVFTT*RYTVRY
Trigger: ATACCGGACCGTGTACCGTCAGGTGGTGAAGACGGA...GCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGTTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR CAA 90 bp ACCAGTTTATGTACACAGGGCCCTGGAGGCCTTGGGAGCAGTGGGTaGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGG +
Preference number: 2 (lower is better)
Translates to: TSLCTQGPGGLGSSG*GKGARHPADQRLPW
Trigger: CCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCACTGCTCCCAAGGCCTCCAGGGCCCTGTGTACATAAACTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR CAA 90 bp CCACTCTTGGGATCACACGAGCTGTTGTTGCCGCAGCTGCAGGGCTaGTCACACTGTGGCCCCCACATTCCTGGGGCACACTCACTGGAA +
Preference number: 2 (lower is better)
Translates to: PLLGSHELLLPQLQG*SHCGPHIPGAHSLE
Trigger: TTCCAGTGAGTGTGCCCCAGGAATGTGGGGGCCACAGTGTGACAAGCCCTGCAGCTGCGGCAACAACAGCTCGTGTGATCCCAAGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR-3UTR TCA 90 bp AACACACACACGCACAGAGCCCAGGCTGAGCATGCACAGAAAAGGTACCCCACAAGCCAGGCATCCTGCTaGTCAGCGTCTCCCATGGTA +
Preference number: 2 (lower is better)
Translates to: NTHTHRAQAEHAQKRYPTSQASC*SASPMV
Trigger: TACCATGGGAGACGCTGATCAGCAGGATGCCTGGCT...TGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGGCTCTGTGCGTGTGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp CCCAGGCTGAGCATGCACAGAAAAGGTACCCCACACGCATGTCTGAAATCAGAGTCCACTCCCTGCTCCTaGCAGGGGTACACTAGGCTC +
Preference number: 2 (lower is better)
Translates to: PRLSMHRKGTPHACLKSESTPCS*QGYTRL
Trigger: GAGCCTAGTGTACCCCTGCCAGGAGCAGGGAGTGGA...CTCTGATTTCAGACATGCGTGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp GCTGTGAAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAGCAACAGCCAGGTGTaGTGGCCTCTGCCATACCAT +
Preference number: 2 (lower is better)
Translates to: AVKDVRRVGTSLRRRCKGSNSQV*WPLPYH
Trigger: ATGGTATGGCAGAGGCCAGCACACCTGGCTGTTGCT...TCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTTCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCAAGGCCTTGGGAGCAGTaGGTTGGGAAAGGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKARPWEQ*VGKGSQ
Trigger: CTGGCTCCCTTTCCCAACCCACTGCTCCCAAGGCCT...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp CGTTGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTTGCCGGTCCACTCCCTaGTCCTGGCAGGGGTACACT +
Preference number: 2 (lower is better)
Translates to: RCYPGEMPPFREVSNLFSCRSTP*SWQGYT
Trigger: AGTGTACCCCTGCCAGGAGCAGGGAGTGGACCGGCA...ACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp GGCACCTTCCCACACCTGAGCTCTGCGTTGTTACCCTGGGGAAATGCCACCCTTAACACATTAAAGAAGTaGCTGGCACCCTGTAGGCCT +
Preference number: 2 (lower is better)
Translates to: GTFPHLSSALLPWGNATLNTLKK*LAPCRP
Trigger: AGGCCTACAGGGTGCCAGGCACTTCTTTAATGTGTT...AAGGGTGGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTGTGGGAAGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTATGTACACAGGGCCCTaGAGGCCTTGGGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCMYTGP*RPWEQW
Trigger: CCACTGCTCCCAAGGCCTCCAGGGCCCTGTGTACAT...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTAGCCAGGCATCCTGCTaGTCAGCGTCTCCCATGGTA +
Preference number: 2 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCSQASC*SASPMV
Trigger: TACCATGGGAGACGCTGATCAGCAGGATGCCTGGCT...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCAAGCAACAGCCAGGTGTaGTGGCCTCTGCCATACCAT +
Preference number: 2 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKASNSQV*WPLPYH
Trigger: ATGGTATGGCAGAGGCCAGCACACCTGGCTGTTGCT...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTAGGGCACTCCAGGTGTaGAGGTCCCTGTGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCRALQV*RSLCQK
Trigger: TTTCTGGCACAGGGACCTGCACACCTGGAGTGCCCT...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp TGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTCCACTCCCTGCTCCTaGCAGGGGTACACTAGGCTC +
Preference number: 2 (lower is better)
Translates to: CYPGEMPPFREVSNLFSLSTPCS*QGYTRL
Trigger: GAGCCTAGTGTACCCCTGCCAGGAGCAGGGAGTGGA...CAGACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGAGGCCTTCAAAAGTTTTaGTACTGGCAGAAGAGCAAA +
Preference number: 2 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGGLQKF*YWQKSK
Trigger: TTTGCTCTTCTGCCAGTATCAAAACTTTTGAAGGCC...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTGTGACTGGCGTGCAGTaGCAGGAACACAGTTCAAGG +
Preference number: 2 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCVTGVQ*QEHSSR
Trigger: CCTTGAACTGTGTTCCTGTCACTGCACGCCAGTCAC...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp CGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCAGTTTATGTACTTCATGTTCACAGCCTaGCGGTCCACTCCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: RMSEIRVTQQLPTHQFMYFMFTA*RSTPCS
Trigger: GGAGCAGGGAGTGGACCGGCAGGCTGTGAACATGAA...GTACATAAACTGGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp GCTGTGAAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAGGCTCCCATCACTTaGTCTGTTAAGCGTTGTTCA +
Preference number: 2 (lower is better)
Translates to: AVKDVRRVGTSLRRRCKGKAPIT*SVKRCS
Trigger: TGAACAACGCTTAACAGAGCAAGTGATGGGAGCCTT...TCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTTCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp CGTTGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTGTGTGCAGGTCCCTGTaGCAGAAAGAAGAGTGGCCT +
Preference number: 2 (lower is better)
Translates to: RCYPGEMPPFREVSNLFSVCRSL*QKEEWP
Trigger: AGGCCACTCTTCTTTCTGGCACAGGGACCTGCACAC...ACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGAATTGCTAGAGTTAATTaGGTTGGTTCCATCTCCCTA +
Preference number: 2 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGIARVN*VGSISL
Trigger: TAGGGAGATGGAACCAACCCAATTAACTCTAGCAAT...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp CACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTCTGCAATCAGGGCTGTaGAAGATGTACGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: HWYLIQSATQPFGEHLLSLQSGL*KMYGGW
Trigger: CCACCCTCCGTACATCTTTCACAGCCCTGATTGCAG...ACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTTTCATGTTCACAGCCTaGCGGTCCACTCCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVFMFTA*RSTPCS
Trigger: GGAGCAGGGAGTGGACCGGCAGGCTGTGAACATGAA...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp CACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTGTGTGCAGGTCCCTGTaGCAGAAAGAAGAGTGGCCT +
Preference number: 2 (lower is better)
Translates to: HWYLIQSATQPFGEHLLSVCRSL*QKEEWP
Trigger: AGGCCACTCTTCTTTCTGGCACAGGGACCTGCACAC...ACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp CACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTAACAGCCAGGTGTGCTaGCCTCTGCCATACCATCCT +
Preference number: 2 (lower is better)
Translates to: HWYLIQSATQPFGEHLLSNSQVC*PLPYHP
Trigger: AGGATGGTATGGCAGAGGCCAGCACACCTGGCTGTT...ACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGATGTACACAGGGCCCTaGAGGCCTTGGGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMMYTGP*RPWEQW
Trigger: CCACTGCTCCCAAGGCCTCCAGGGCCCTGTGTACAT...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGGGGTGGGCACTTCCCTaGGGAGGAGGTGTAAAGGAA +
Preference number: 2 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMGWALP*GGGVKE
Trigger: TTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCC...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTAACAGCCAGGTGTGCTaGCCTCTGCCATACCATCCT +
Preference number: 2 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVNSQVC*PLPYHP
Trigger: AGGATGGTATGGCAGAGGCCAGCACACCTGGCTGTT...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGGGTTCACTGAATCAATaGAGGAGGCCAGTTAGGAGG +
Preference number: 2 (lower is better)
Translates to: CQGRANIEHKHRILAFREGSLNQ*RRPVRR
Trigger: CCTCCTAACTGGCCTCCTCCATTGATTCAGTGAACC...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCAAGGGCACTCCAGGTGTaGAGGTCCCTGTGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKARALQV*RSLCQK
Trigger: TTTCTGGCACAGGGACCTGCACACCTGGAGTGCCCT...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp CACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTAACACATTAAAGAAGTaGCTGGCACCCTGTAGGCCT +
Preference number: 2 (lower is better)
Translates to: HWYLIQSATQPFGEHLLSNTLKK*LAPCRP
Trigger: AGGCCTACAGGGTGCCAGGCACTTCTTTAATGTGTT...ACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGGGGTGGGCACTTCCCTaGGGAGGAGGTGTAAAGGAA +
Preference number: 2 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMGWALP*GGGVKE
Trigger: TTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCC...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGGGTTCACTGAATCAATaGAGGAGGCCAGTTAGGAGG +
Preference number: 2 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMGSLNQ*RRPVRR
Trigger: CCTCCTAACTGGCCTCCTCCATTGATTCAGTGAACC...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGGTGACTGGCGTGCAGTaGCAGGAACACAGTTCAAGG +
Preference number: 2 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMVTGVQ*QEHSSR
Trigger: CCTTGAACTGTGTTCCTGTCACTGCACGCCAGTCAC...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGCCCCACACGCATGTCTaGAATCAGAGTTACCCAGCA +
Preference number: 2 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMPHTHV*NQSYPA
Trigger: TGCTGGGTAACTCTGATTTCAGACATGCGTGTGGGG...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGGCAAAGAGGCACCTATaGAGGCTTTCAGGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMAKRHL*RLSGRE
Trigger: CTCCCTACCTGAAAGCCTTCATAGGTGCCTCTTTGC...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTCAGGTACCTGGTGAGTaGACACAGCTGCAATCAGGG +
Preference number: 2 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSIQVPGE*TQLQSG
Trigger: CCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTG...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp ACCAGCCTGTATTTTGAAATTATGAGCCATGCATTGGAAGGTTCACTGAATCAAAAGGCTCCCATCACTTaGTCTGTTAAGCGTTGTTCA +
Preference number: 2 (lower is better)
Translates to: TSLYFEIMSHALEGSLNQKAPIT*SVKRCS
Trigger: TGAACAACGCTTAACAGAGCAAGTGATGGGAGCCTT...TTGATTCAGTGAACCTTCCAATGCATGGCTCATAATTTCAAAATACAGGCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp ACCAGCCTGTATTTTGAAATTATGAGCCATGCATTGGAAGGTTCACTGAATCAACTACTAAATGGTAAGTaGCCTAGGACAGAACCTGTG +
Preference number: 2 (lower is better)
Translates to: TSLYFEIMSHALEGSLNQLLNGK*PRTEPV
Trigger: CACAGGTTCTGTCCTAGGGCACTTACCATTTAGTAG...TTGATTCAGTGAACCTTCCAATGCATGGCTCATAATTTCAAAATACAGGCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCAAACCAGCCTGTATTTTaGAATTATGAGCCATGCATT +
Preference number: 2 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKANQPVF*NYEPCI
Trigger: AATGCATGGCTCATAATTTCAAAATACAGGCTGGTT...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CCA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTGTTACTGCATGTCACTaGTACTTAATTCAGTCAGCC +
Preference number: 2 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSIVTACH*YLIQSA
Trigger: GGCTGACTGAATTAAGTACCAGTGACATGCAGTAAC...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR TCA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTAAATTCTGCTACCTGTaGAGTGCAATAAATCAAGGC +
Preference number: 2 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSIKFCYL*SAINQG
Trigger: GCCTTGATTTATTGCACTTCACAGGTAGCAGAATTT...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR GCA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTTATCTTAGCAGTTACTaGATGTCACTGGTACTTAAT +
Preference number: 2 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSIYLSSY*MSLVLN
Trigger: ATTAAGTACCAGTGACATGCAGTAACTGCTAAGATA...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR TCA 72 bp CACTGCAGGCGCTGGCGGTGGTCCGTCTTCACCACCTaGCGGTACACGGTCCGGTATACAACCCCGACACAG +
Preference number: 3 (lower is better)
Translates to: HCRRWRWSVFTT*RYTVRYTTPTQ
Trigger: CTGTGTCGGGGTTGTATACCGGACCGTGTACCGTCAGGTGGTGAAGACGGACCACCGCCAGCGCCTGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR GCA 72 bp GCCCCGCCAGCCTGGCACACATTGGCACTGATTGGGTaGCACACAACGGCCATGGACACACTCCTGGGCACA +
Preference number: 3 (lower is better)
Translates to: APPAWHTLALIG*HTTAMDTLLGT
Trigger: TGTGCCCAGGAGTGTGTCCATGGCCGTTGTGTGGCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR GCA 72 bp GCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCCCTaGTCCTGGCAGGGGTACACTAGGCTCTGTCCCCAG +
Preference number: 3 (lower is better)
Translates to: ALFMFTACRSTP*SWQGYTRLCPQ
Trigger: CTGGGGACAGAGCCTAGTGTACCCCTGCCAGGAGCAGGGAGTGGACCGGCAGGCTGTGAACATGAACAACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR CCA 72 bp GGCACACTCACTGGAACAGTCGTCGCCCCGCCAGCCTaGCACACATTGGCACTGATTGGGTGCCACACAACG +
Preference number: 3 (lower is better)
Translates to: GTLTGTVVAPPA*HTLALIGCHTT
Trigger: CGTTGTGTGGCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGTTCCAGTGAGTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR CCA 72 bp CTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTaGCCTACAGGAGGACCTAGAGGCCGGTGTGACTGG +
Preference number: 3 (lower is better)
Translates to: LQVCRSLCQKEE*PTGGPRGRCDW
Trigger: CCAGTCACACCGGCCTCTAGGTCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR GCA 72 bp CACTCTTGGGATCACACGAGCTGTTGTTGCCGCAGCTaGAGGGCTTGTCACACTGTGGCCCCCACATTCCTG +
Preference number: 3 (lower is better)
Translates to: HSWDHTSCCCRS*RACHTVAPTFL
Trigger: CAGGAATGTGGGGGCCACAGTGTGACAAGCCCTGCAGCTGCGGCAACAACAGCTCGTGTGATCCCAAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444016.5
3UTR CCA 72 bp GAGTGGCCTACAGGAGGACCTAGAGGCCGGTGTGACTaGCGTGCAGTGACAGGAACACAGTTCAAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: EWPTGGPRGRCD*RAVTGTQFKVR
Trigger: CCTCACCTTGAACTGTGTTCCTGTCACTGCACGCCAGTCACACCGGCCTCTAGGTCCTCCTGTAGGCCACTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR TCA 72 bp TGCCTGGCACCCTGTAGGCCTTCTGCAGGTACCTGGTaGGTGAACACAGCTGCAATCAGGGCTGTGAAAGAT +
Preference number: 3 (lower is better)
Translates to: CLAPCRPSAGTW*VNTAAIRAVKD
Trigger: ATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAAGGCCTACAGGGTGCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR GCA 72 bp CCCACACCTGAGCTCTGCGTTGTTACCCTGGGGAAATaGCACCCTTTAGGGAAGTCTCCAACTTATTCAGTC +
Preference number: 3 (lower is better)
Translates to: PTPELCVVTLGK*HPLGKSPTYSV
Trigger: GACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CAA 90 bp GCTGTGAAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAGGCCTTCAAAAGTTTaGATACTGGCAGAAGAGCAA +
Preference number: 3 (lower is better)
Translates to: AVKDVRRVGTSLRRRCKGRPSKV*ILAEEQ
Trigger: TTGCTCTTCTGCCAGTATCAAAACTTTTGAAGGCCT...TCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTTCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR GCA 72 bp AATTGGGTTGGTTCCATCTCCCTACTAAATGGTAAGTaGCCTAGGACAGAACCTGTGCCTGGTACCCTTCTA +
Preference number: 3 (lower is better)
Translates to: NWVGSISLLNGK*PRTEPVPGTLL
Trigger: TAGAAGGGTACCAGGCACAGGTTCTGTCCTAGGGCACTTACCATTTAGTAGGGAGATGGAACCAACCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CAA 90 bp CACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTCCAGTTAGGAGGCTATaGCTAGAGTTAATTGGGTTG +
Preference number: 3 (lower is better)
Translates to: HWYLIQSATQPFGEHLLSPVRRL*LELIGL
Trigger: CAACCCAATTAACTCTAGCAATAGCCTCCTAACTGG...ACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR CCA 72 bp GATGGCTCATCTATCTTAGCAGTTACTGCATGTCACTaGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGG +
Preference number: 3 (lower is better)
Translates to: DGSSILAVTACH*YLIQSATQPFG
Trigger: CCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACATGCAGTAACTGCTAAGATAGATGAGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CAA 90 bp GTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTGCCTAAAGGGAGAGCTAATATaGAGCATAAGCACAGGATTC +
Preference number: 3 (lower is better)
Translates to: VLNSVSHSAFWGAFVECLKGELI*SISTGF
Trigger: GAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTT...TAGGCACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR CCA 72 bp ATTATGAGCCATGCATTGGAAGGTTCACTGAATCAATaGAGGAGGCCAGTTAGGAGGCTATTGCTAGAGTTA +
Preference number: 3 (lower is better)
Translates to: IMSHALEGSLNQ*RRPVRRLLLEL
Trigger: TAACTCTAGCAATAGCCTCCTAACTGGCCTCCTCCATTGATTCAGTGAACCTTCCAATGCATGGCTCATAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CAA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGCCAGTTAGGAGGCTATaGCTAGAGTTAATTGGGTTG +
Preference number: 3 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMPVRRL*LELIGL
Trigger: CAACCCAATTAACTCTAGCAATAGCCTCCTAACTGG...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CAA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCAATAAGCACAGGATTCTaGCCTTCAGGGAGCTTACAG +
Preference number: 3 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKAISTGF*PSGSLQ
Trigger: CTGTAAGCTCCCTGAAGGCAAGAATCCTGTGCTTAT...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CAA 90 bp AAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGGCTCATCTAATAAGCACAGGATTCTaGCCTTCAGGGAGCTTACAG +
Preference number: 3 (lower is better)
Translates to: KSPTYSVCNCQSIQMAHLISTGF*PSGSLQ
Trigger: CTGTAAGCTCCCTGAAGGCAAGAATCCTGTGCTTAT...TAGATGAGCCATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR CCA 72 bp CAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATaGCTCATCTATCTTAGCAGTTACTGCATGTCACTG +
Preference number: 3 (lower is better)
Translates to: QLIQSVTVRAYR*LIYLSSYCMSL
Trigger: CAGTGACATGCAGTAACTGCTAAGATAGATGAGCCATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
3UTR-3UTR CAA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCAGCTTTTCTTAACCTATaGCTGTCACATATATGTCCC +
Preference number: 3 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKAAFLNL*LSHICP
Trigger: GGGACATATATGTGACAGCAATAGGTTAAGAAAAGC...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
CDS-3UTR CCA 90 bp CCCACATTCCTGGGGCACACTCACTGGAACAGTCGTCGCCCCGCCAGCCTGGCAGTCTCCCCTGCGGCCTaGGGTAGGAACCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PTFLGHTHWNSRRPASLAVSPAA*GRNRRG
Trigger: ACCCCGGCGGTTCCTACCCCAGGCCGCAGGGGAGAC...TGCCAGGCTGGCGGGGCGACGACTGTTCCAGTGAGTGTGCCCCAGGAATGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CCA 90 bp CGGCCATGGACACACTCCTGGGCACAGAGCGGGACACAGAACCCCCTGCTCTCATGCAGAGGCCTGCCTTaGGGCCCCGTCTCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: RPWTHSWAQSGTQNPLLSCRGLP*GPVSPA
Trigger: CGCAGGGGAGACGGGGCCCCAAGGCAGGCCTCTGCA...TGAGAGCAGGGGGTTCTGTGTCCCGCTCTGTGCCCAGGAGTGTGTCCATGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR GCA 90 bp AGCCATGGCAGCACTGCAGGCGCTGGCGGTGGTCCGTCTTCACCACCTGACGGTGGAACCGCCGGGGTCTaGGAGGAGGAGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: SHGSTAGAGGGPSSPPDGGTAGV*EEEDWT
Trigger: TGTCCAGTCCTCCTCCTCGCAGACCCCGGCGGTTCC...ACCGTCAGGTGGTGAAGACGGACCACCGCCAGCGCCTGCAGTGCTGCCATGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CCA 90 bp ACGGCCATGGACACACTCCTGGGCACAGAGCGGGACACAGAACCCCCTGCTCTCTGCGAGGAGGAGGACTaGACAGCCGAGGACGGGGCG +
Preference number: 4 (lower is better)
Translates to: TAMDTLLGTERDTEPPALCEEED*TAEDGA
Trigger: CGCCCCGTCCTCGGCTGTCCAGTCCTCCTCCTCGCA...GAGAGCAGGGGGTTCTGTGTCCCGCTCTGTGCCCAGGAGTGTGTCCATGGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CCA 90 bp GCAGCACTGCAGGCGCTGGCGGTGGTCCGTCTTCACCACCTGACGGTACACGGTGGGCTTGTCACACTGTaGCCCCCACATTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AALQALAVVRLHHLTVHGGLVTL*PPHSWG
Trigger: GCCCCAGGAATGTGGGGGCCACAGTGTGACAAGCCC...ACCGTGTACCGTCAGGTGGTGAAGACGGACCACCGCCAGCGCCTGCAGTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR GCA 90 bp ACTGGAACAGTCGTCGCCCCGCCAGCCTGGCACACATTGGCACTGATTGGGTGCGACATTGCAGAGGCCTaGCTTGGGGCCCCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TGTVVAPPAWHTLALIGCDIAEA*LGAPSP
Trigger: GGGAGACGGGGCCCCAAGGCAGGCCTCTGCAATGTC...GCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGTTCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CCA 90 bp CCACATTCCTGGGGCACACTCACTGGAACAGTCGTCGCCCCGCCAGCCTGGCACCTGAAGGGGCGGGAGTaGGACTCCTTGGTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PHSWGTLTGTVVAPPAWHLKGRE*DSLVVV
Trigger: TACCACCACCAAGGAGTCCCACTCCCGCCCCTTCAG...GTGCCAGGCTGGCGGGGCGACGACTGTTCCAGTGAGTGTGCCCCAGGAATGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CCA 90 bp ACTGGAACAGTCGTCGCCCCGCCAGCCTGGCACACATTGGCACTGATTGGGTGCCAGCACTGCAGGCGCTaGCGGTGGTCCGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: TGTVVAPPAWHTLALIGCQHCRR*RWSVFT
Trigger: GGTGAAGACGGACCACCGCCAGCGCCTGCAGTGCTG...GCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGTTCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CCA 90 bp CCCACATTCCTGGGGCACACTCACTGGAACAGTCGTCGCCCCGCCAGCCTGGCAGTCGCCCCGCCAGCCTaGCACACATTGGCACTGATT +
Preference number: 4 (lower is better)
Translates to: PTFLGHTHWNSRRPASLAVAPPA*HTLALI
Trigger: AATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGAC...TGCCAGGCTGGCGGGGCGACGACTGTTCCAGTGAGTGTGCCCCAGGAATGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CCA 90 bp GCAGCACTGCAGGCGCTGGCGGTGGTCCGTCTTCACCACCTGACGGTACACGGTTCTGAGTTTGTGGGCTaGGGGCAAGTATGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AALQALAVVRLHHLTVHGSEFVG*GQVWGP
Trigger: GGGCCCCCATACTTGCCCCCAGCCCACAAACTCAGA...ACCGTGTACCGTCAGGTGGTGAAGACGGACCACCGCCAGCGCCTGCAGTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR TCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGACCAGGGGTACAGGGCTaGAGGCAGTTCGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGPGVQG*RQFGGC
Trigger: GCAGCCCCCGAACTGCCTTCAGCCCTGTACCCCTGG...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp CCCGCCAGCCTGGCACACATTGGCACTGATTGGGTGCCACACAACGGCCATGGATGGGATCACTGGGGTTaGGAGTTCCAGCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PASLAHIGTDWVPHNGHGWDHWG*EFQPAA
Trigger: TGCGGCTGGCTGGAACTCTCAACCCCAGTGATCCCA...TCCATGGCCGTTGTGTGGCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR TCA 90 bp CACACTGTGGCCCCCACATTCCTGGGGCACACTCACTGGAACAGTCGTCGCCCCTCCGTCTTCACCACCTaGCGGTACACGGTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: HTVAPTFLGHTHWNSRRPSVFTT*RYTVRY
Trigger: ATACCGGACCGTGTACCGTCAGGTGGTGAAGACGGA...GGGGCGACGACTGTTCCAGTGAGTGTGCCCCAGGAATGTGGGGGCCACAGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR TCA 90 bp ACGGCCATGGACACACTCCTGGGCACAGAGCGGGACACAGAACCCCCTGCTCTCGGCACACATTGGCACTaGTTGGGTGCCACACAACGG +
Preference number: 4 (lower is better)
Translates to: TAMDTLLGTERDTEPPALGTHWH*LGATQR
Trigger: CCGTTGTGTGGCACCCAATCAGTGCCAATGTGTGCC...GAGAGCAGGGGGTTCTGTGTCCCGCTCTGTGCCCAGGAGTGTGTCCATGGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR GCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGAAAGCCATGGCAGCACTaGAGGCGCTGGCGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGKPWQH*RRWRWS
Trigger: GGACCACCGCCAGCGCCTGCAGTGCTGCCATGGCTT...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GCAGCACTGCAGGCGCTGGCGGTGGTCCGTCTTCACCACCTGACGGTACACGGTTTGGCACTGATTGGGTaGCACACAACGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: AALQALAVVRLHHLTVHGLALIG*HTTAMD
Trigger: GTCCATGGCCGTTGTGTGGCACCCAATCAGTGCCAA...ACCGTGTACCGTCAGGTGGTGAAGACGGACCACCGCCAGCGCCTGCAGTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CCA 90 bp CACATTGGCACTGATTGGGTGCCACACAACGGCCATGGACACACTCCTGGGCACCTGGGGCACACTCACTaGAACAGTCGTCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: HIGTDWVPHNGHGHTPGHLGHTH*NSRRPA
Trigger: GGCGGGGCGACGACTGTTCCAGTGAGTGTGCCCCAG...GTGCCCAGGAGTGTGTCCATGGCCGTTGTGTGGCACCCAATCAGTGCCAATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CCA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGAGCCACTGTCTCTCTGTaGCTGGGGTTGCCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: VGWEREPGILLISVSHGRATVSL*LGLPPP
Trigger: AGGCGGCGGCAACCCCAGCCACAGAGAGACAGTGGC...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
3UTR CAA 72 bp ACTGGAACAGTCGTCGCCCCGCCAGCCTGGCACACATaGGCACTGATTGGGTGCCACACAACGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: TGTVVAPPAWHT*ALIGCHTTAMD
Trigger: GTCCATGGCCGTTGTGTGGCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGTTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR GCA 90 bp GGCACCTTCCCACACCTGAGCTCTGCGTTGTTACCCTGGGGAAATGCCACCCTTTCATCTCCATGTAGCTaGTCTCCCGGGGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GTFPHLSSALLPWGNATLSSPCS*SPGGPL
Trigger: CAGGGGGCCCCCGGGAGAGCAGCTACATGGAGATGA...AAGGGTGGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTGTGGGAAGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp ACTGGAACAGTCGTCGCCCCGCCAGCCTGGCACACATTGGCACTGATTGGGTGCTGGCCCCCACATTCCTaGGGCACACTCACTGGAACA +
Preference number: 4 (lower is better)
Translates to: TGTVVAPPAWHTLALIGCWPPHS*GTLTGT
Trigger: TGTTCCAGTGAGTGTGCCCCAGGAATGTGGGGGCCA...GCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGTTCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CCA 90 bp CTGCAGGCGCTGGCGGTGGTCCGTCTTCACCACCTGACGGTACACGGTCCGGTATTTCCTCTGAGTTTGTaGGCTGGGGGCAAGTATGGG +
Preference number: 4 (lower is better)
Translates to: LQALAVVRLHHLTVHGPVFPLSL*AGGKYG
Trigger: CCCATACTTGCCCCCAGCCCACAAACTCAGAGGAAA...TACCGGACCGTGTACCGTCAGGTGGTGAAGACGGACCACCGCCAGCGCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR TCA 90 bp TCACCACCTGACGGTACACGGTCCGGTATACAACCCCGACACAGACCATGCAGAGGGACACAGAGGCGGTaGCATTGCAGAGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPPDGTRSGIQPRHRPCRGTQRR*HCRGLP
Trigger: AGGCAGGCCTCTGCAATGTCACCGCCTCTGTGTCCC...TCTGCATGGTCTGTGTCGGGGTTGTATACCGGACCGTGTACCGTCAGGTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR TCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGACTCGCCGTCGATGGGTaGGCAGGCGATGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGLAVDG*AGDGIF
Trigger: GAAAATGCCATCGCCTGCTCACCCATCGACGGCGAG...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp ACAGTCGTCGCCCCGCCAGCCTGGCACACATTGGCACTGATTGGGTGCCACACATGTTGTTGCCGCAGCTaGAGGGCTTGTCACACTGTG +
Preference number: 4 (lower is better)
Translates to: TVVAPPAWHTLALIGCHTCCCRS*RACHTV
Trigger: CACAGTGTGACAAGCCCTGCAGCTGCGGCAACAACA...TGTGTGGCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR GCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGATCAGGATATGAAGCCTaGCTTGGGGCCCCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGSGYEA*LGAPSP
Trigger: GGGAGACGGGGCCCCAAGGCAGGCTTCATATCCTGA...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCCATCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCTGCGAGGAGGAGGACTaGACAGCCGAGGACGGGGCG +
Preference number: 4 (lower is better)
Translates to: PITCSVKRCSCSQPAGPLCEEED*TAEDGA
Trigger: CGCCCCGTCCTCGGCTGTCCAGTCCTCCTCCTCGCA...GAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCGTCTTCACCACCTGACGGTACACGGTCCGGTATACAACCCCGACACAGACCAGCCACACAACGGCCATaGACACACTCCTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PSSPPDGTRSGIQPRHRPATQRP*THSWAQ
Trigger: CTGTGCCCAGGAGTGTGTCCATGGCCGTTGTGTGGC...TGGTCTGTGTCGGGGTTGTATACCGGACCGTGTACCGTCAGGTGGTGAAGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CCA 90 bp CCCATCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCCCTGGAGGGCATGGCTaGGAGCAGTCGGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PITCSVKRCSCSQPAGPLPGGHG*EQSGPV
Trigger: GACAGGCCCCGACTGCTCCCAGCCATGCCCTCCAGG...GAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GGTACCCCACACGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCGTGTCCTGGAGGGCATaGCTGGGAGCAGTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GTPHACLKSELPSNFQPTVSWRA*LGAVGA
Trigger: GGCCCCGACTGCTCCCAGCCATGCCCTCCAGGACAC...GGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCGTGTGGGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GGCACCTTCCCACACCTGAGCTCTGCGTTGTTACCCTGGGGAAATGCCACCCTTTTCTCCCCAGTGTCCTaGAGGGCATGGCTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: GTFPHLSSALLPWGNATLFSPVS*RAWLGA
Trigger: TGCTCCCAGCCATGCCCTCCAGGACACTGGGGAGAA...AAGGGTGGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTGTGGGAAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGACAGGGTTCTGCAGGCTaGCAAAGAGCGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VGWEREPGILLISVSHGRQGSAG*QRAGLE
Trigger: TTCCAGGCCCGCTCTTTGCCAGCCTGCAGAACCCTG...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GGCACCTTCCCACACCTGAGCTCTGCGTTGTTACCCTGGGGAAATGCCACCCTTTGGTTATCATGCCCTTaGGCCCCACCTGGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: GTFPHLSSALLPWGNATLWLSCP*APPGRS
Trigger: TGAGCGGCCAGGTGGGGCCCAAGGGCATGATAACCA...AAGGGTGGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTGTGGGAAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGATCAGGGAAGCCACACTaGCCCCGAGCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VGWEREPGILLISVSHGRSGKPH*PRAPLQ
Trigger: CTGAAGAGGAGCTCGGGGCCAGTGTGGCTTCCCTGA...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCAGGCCCCCTGGCAAGCTaGGCAGGTCCCGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKAGPLAS*AGPGWW
Trigger: CCACCATCCGGGACCTGCCCAGCTTGCCAGGGGGCC...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GGCACCTTCCCACACCTGAGCTCTGCGTTGTTACCCTGGGGAAATGCCACCCTTACAGAGTCTCGGTCATaGATCAGGGGGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTFPHLSSALLPWGNATLTESRS*IRGLGC
Trigger: GCAGCCCAGCCCCCTGATCCATGACCGAGACTCTGT...AAGGGTGGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTGTGGGAAGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCCCTGGGAGGCAGAGGGGGCTaGGAGCCCACAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: SLALLSVVHVHSLPVHSLGGRGG*EPTESR
Trigger: CCGAGACTCTGTGGGCTCCCAGCCCCCTCTGCCTCC...CAGGGAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGACAACCTTCTCCAAACTaGCCCTTCGGACAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VGWEREPGILLISVSHGRQPSPN*PFGQGS
Trigger: GCTGCCCTGTCCGAAGGGGCAGTTTGGAGAAGGTTG...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGACAAGGTGCACCACTGTaGCCTGGGGGACATACACAG +
Preference number: 4 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGQGAPL*PGGHTQ
Trigger: CTGTGTATGTCCCCCAGGGCACAGTGGTGCACCTTG...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GGCACCTTCCCACACCTGAGCTCTGCGTTGTTACCCTGGGGAAATGCCACCCTTACCCCAGCACTGCAATaGCAATCACTGCACCCAGCG +
Preference number: 4 (lower is better)
Translates to: GTFPHLSSALLPWGNATLTPALQ*QSLHPA
Trigger: CGCTGGGTGCAGTGATTGGCATTGCAGTGCTGGGGT...AAGGGTGGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTGTGGGAAGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCACTCTGTGGCTGGGGTTaGCGCCGCCTCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKALCGWG*RRLWLS
Trigger: GGACAGCCAGAGGCGGCGGCAACCCCAGCCACAGAG...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGAAGGTGTGCTGGCCTCTaGCATACCATCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGRCAGL*HTILAP
Trigger: AGGAGCCAGGATGGTATGGCAGAGGCCAGCACACCT...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCAAGGCCGCTGGTAGCCTaGCAGACGCCACCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKARPLVA*QTPPCR
Trigger: CCTGCACGGTGGCGTCTGCCAGGCTACCAGCGGCCT...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCCCTGTCAGGGCAGGACAGGTaGCAGCGGGCACCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SLALLSVVHVHSLPVHSLSGQDR*QRAPIQ
Trigger: CTGGATGGGTGCCCGCTGCCACCTGTCCTGCCCTGA...CAGGGAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGAAGGACCACACTGGCATaGCTGGGAGCAGTTAGCACC +
Preference number: 4 (lower is better)
Translates to: VGWEREPGILLISVSHGRRTTLA*LGAVST
Trigger: GGTGCTAACTGCTCCCAGCCATGCCAGTGTGGTCCT...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCCCTGCTGTCTCTCTGTGGCTaGGGTTGCCGCCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLALLSVVHVHSLPVHSLLSLCG*GCRRLW
Trigger: CCAGAGGCGGCGGCAACCCCAGCCACAGAGAGACAG...CAGGGAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp AACACACACACGCACAGAGCCCAGGCTGAGCATGCACAGAAAAGGTACCCCACACAGGTCCCACCATGGTaGCATTGGCAGGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NTHTHRAQAEHAQKRYPTQVPPW*HWQVWA
Trigger: TGCCCAGACCTGCCAATGTCACCATGGTGGGACCTG...TGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGGCTCTGTGCGTGTGTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGACTGCAATCAGGGCTGTaGAAGATGTACGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGLQSGL*KMYGGW
Trigger: CCACCCTCCGTACATCTTTCACAGCCCTGATTGCAG...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp ACTGGAACAGTCGTCGCCCCGCCAGCCTGGCACACATTGGCACTGATTGGGTGCAGCTTTCCCAGAAGCTaGAGGTATTGGGATCACTGG +
Preference number: 4 (lower is better)
Translates to: TGTVVAPPAWHTLALIGCSFPRS*RYWDHW
Trigger: CCAGTGATCCCAATACCTGCAGCTTCTGGGAAAGCT...GCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGTTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR GCA 90 bp GCTGTGAAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAGCTGCCAACCTTCCTTaGAGACGCACTCGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: AVKDVRRVGTSLRRRCKGAANLP*RRTRRR
Trigger: TCGACGGCGAGTGCGTCTGCAAGGAAGGTTGGCAGC...TCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTTCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGACCTGGATTCCAATCCTaGAAGGTGCACCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGPGFQS*KVHHCA
Trigger: GGCACAGTGGTGCACCTTGCAGGATTGGAATCCAGG...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGAACAGCCAGGTGGTGGTaGTCCTTGCCTTTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: VGWEREPGILLISVSHGRTARWW*SLPFCQ
Trigger: CTGGCAAAAAGGCAAGGAGCACCACCACCTGGCTGT...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCAGGCCGCTCAGGGTTCTaGAGGCTGGCAAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKAGRSGF*RLAKSG
Trigger: CCCGCTCTTTGCCAGCCTGCAGAACCCTGAGCGGCC...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GCTGTGAAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGACCATGGACACACTCCTaGGCACAGAGCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: AVKDVRRVGTSLRRRCKGPWTHS*AQSGTQ
Trigger: CTGTGTCCCGCTCTGTGCCCAGGAGTGTGTCCATGG...TCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTTCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GGTACCCCACACGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCGGGCTTGTCACACTGTaGCCCCCACATTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GTPHACLKSELPSNFQPTGLVTL*PPHSWG
Trigger: GCCCCAGGAATGTGGGGGCCACAGTGTGACAAGCCC...GGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCGTGTGGGGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GGCACCTTCCCACACCTGAGCTCTGCGTTGTTACCCTGGGGAAATGCCACCCTTGGCAAGAATGGGTGCTaGGGCAGAAGAAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GTFPHLSSALLPWGNATLGKNGC*GRRSQK
Trigger: CTTCTGGCTTCTTCTGCCCCAGCACCCATTCTTGCC...AAGGGTGGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTGTGGGAAGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTGTGCTCCTGGCACCCTaGCCCATGCGTGTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCVLLAP*PMRVLR
Trigger: CCGCAGGACACGCATGGGCCAGGGTGCCAGGAGCAC...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AACACACACACGCACAGAGCCCAGGCTGAGCATGCACAGAAAAGGTACCCCACACTGCAGACTGCCTCATaGGCACACTGGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: NTHTHRAQAEHAQKRYPTLQTAS*AHWQLA
Trigger: TGCCAGCTGCCAGTGTGCCCATGAGGCAGTCTGCAG...TGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGGCTCTGTGCGTGTGTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGAAACAGCCAGGTGTGCTaGCCTCTGCCATACCATCCT +
Preference number: 4 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGNSQVC*PLPYHP
Trigger: AGGATGGTATGGCAGAGGCCAGCACACCTGGCTGTT...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTAGCGGCACTGCCCAGTaGATCGGTCACAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCSGTAQ*IGHRGR
Trigger: GCGGCCTCTGTGACCGATTCACTGGGCAGTGCCGCT...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCACCAGCGTTCAGGATATaGAGCCTGCCTTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKAPAFRI*SLPWGP
Trigger: GGGGCCCCAAGGCAGGCTTCATATCCTGAACGCTGG...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp TGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTCTGCTGGGGATCGCAGGGTaGCCCATGGCACTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: CYPGEMPPFREVSNLFSLLGIAG*PMALAA
Trigger: CGCTGCCAGTGCCATGGGGCACCCTGCGATCCCCAG...CAGACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGATTTGGCAAGAATGGGTaGTGGGGCAGAAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VGWEREPGILLISVSHGRFGKNG*WGRRSQ
Trigger: CTGGCTTCTTCTGCCCCAGCACCCATTCTTGCCAAA...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCAGGAGCGCAGCGGCACTaGCCAGTGAATCGGTCACAG +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKAGAQRH*PVNRSQ
Trigger: CTGTGACCGATTCACTGGGCAGTGCCGCTGCGCTCC...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp AGAAAGAACACATTAAAGAAGTGCCTGGCACCCTGTAGGCCTTCTGCAGGTACCGTCTCAGCACAGTCCTaGCCAAAGCGGCCCACCGGG +
Preference number: 4 (lower is better)
Translates to: RKNTLKKCLAPCRPSAGTVSAQS*PKRPTG
Trigger: CCCGGTGGGCCGCTTTGGGCAGGACTGTGCTGAGAC...GGTACCTGCAGAAGGCCTACAGGGTGCCAGGCACTTCTTTAATGTGTTCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTGCGGGCAGCTCTCGTTaGAGTGGAGGCCCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HWYLIQSATQPFGEHLLSAGSSR*SGGPPS
Trigger: GCTGGGCGGGCCTCCACTGCAACGAGAGCTGCCCGC...ACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CGTTGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTTGGCACCCTGGCCCATaGGTGTCCTGCGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RCYPGEMPPFREVSNLFSWHPGP*VSCGQL
Trigger: GAGCTGCCCGCAGGACACGCATGGGCCAGGGTGCCA...ACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CCCAGGCTGAGCATGCACAGAAAAGGTACCCCACACGCATGTCTGAAATCAGAGTTGGGGGCTGCAGACTaGCTCATGGGCACACTGGCA +
Preference number: 4 (lower is better)
Translates to: PRLSMHRKGTPHACLKSELGAAD*LMGTLA
Trigger: TGCCAGTGTGCCCATGAGGCAGTCTGCAGCCCCCAA...CTCTGATTTCAGACATGCGTGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGAATGGGCCTGGGCCATTaGTGTAGCTATAGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGMGLGH*CSYSCS
Trigger: GCTACAGCTATAGCTACAGCAATGGCCCAGGCCCAT...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCAGTTTATGTACGTCTCCCCTGCGGCCTaGGGTAGGAACCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RMSEIRVTQQLPTHQFMYVSPAA*GRNRRG
Trigger: ACCCCGGCGGTTCCTACCCCAGGCCGCAGGGGAGAC...GTACATAAACTGGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCACGCACTCGCCGTCGATaGGTGAGCAGGCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKARTRRR*VSRRWH
Trigger: ATGCCATCGCCTGCTCACCCATCGACGGCGAGTGCG...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCCCTGGTCCCGTTCGAGGGGTaGCAGAAGGAGTGGTTAGCG +
Preference number: 4 (lower is better)
Translates to: SLALLSVVHVHSLPVHSLVPFEG*QKEWLA
Trigger: CGCTAACCACTCCTTCTGCCACCCCTCGAACGGGAC...CAGGGAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp CCGTCTTCACCACCTGACGGTACACGGTCCGGTATACAACCCCGACACAGACCAACAGACCATGCAGAATaGATCCCTAGAAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSSPPDGTRSGIQPRHRPTDHAE*IPRSQE
Trigger: CTCCTGGCTTCTAGGGATTCATTCTGCATGGTCTGT...TGGTCTGTGTCGGGGTTGTATACCGGACCGTGTACCGTCAGGTGGTGAAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR GCA 90 bp TCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCCCTGAGGCAGTTCGGGGGCTaGAGACCAGAAGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLALLSVVHVHSLPVHSLRQFGG*RPEGQE
Trigger: TTCTTGCCCTTCTGGTCTGCAGCCCCCGAACTGCCT...CAGGGAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGGGGCCCAGTTCTCTCTaGGGGGCAGAAGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: CQGRANIEHKHRILAFREGPSSL*GAEAGS
Trigger: GGAGCCTGCTTCTGCCCCGCAGAGAGAACTGGGCCC...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCAGTGTTCGCACAGACATaGGCCGTTGGCCGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKAVFAQT*AVGREA
Trigger: TGCTTCCCGGCCAACGGCGCATGTCTGTGCGAACAC...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGGGGGCTCCCGGCGGTaGTTCCAGTCAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVGGSRR*FQSAGR
Trigger: CCTGCCTGCTGACTGGAAGCACCGCCGGGAGCCCCC...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCAGTTTATGTACTTCGGTCCAGGCGGCTaGTCCCCCTGTCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RMSEIRVTQQLPTHQFMYFGPGG*SPCPEA
Trigger: GGCCTCTGGACAGGGGGAGCAGCCGCCTGGACCGAA...GTACATAAACTGGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GGTACCCCACACGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCTGGGCTGCTCGTAGGTaGCACTGTCTCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GTPHACLKSELPSNFQPTWAARR*HCLSVA
Trigger: AGCCACAGAGAGACAGTGGCACCTACGAGCAGCCCA...GGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCGTGTGGGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GGTACCCCACACGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCTCCGGTATACAACCGTaGGCTGGGGGCAAGTATGGG +
Preference number: 4 (lower is better)
Translates to: GTPHACLKSELPSNFQPTSGIQP*AGGKYG
Trigger: CCCATACTTGCCCCCAGCCCACGGTTGTATACCGGA...GGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCGTGTGGGGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AACACACACACGCACAGAGCCCAGGCTGAGCATGCACAGAAAAGGTACCCCACAATTCCTGGGAGCAGTTaGGTCCGTGAAAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: NTHTHRAQAEHAQKRYPTIPGSS*VRESPL
Trigger: CAGAGGGCTTTCACGGACCCAACTGCTCCCAGGAAT...TGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGGCTCTGTGCGTGTGTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCCATCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCACAGGCCCCAGTCTCTaGGTGGCACTTTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PITCSVKRCSCSQPAGPLTGPSL*VALFSR
Trigger: CCTGGAGAAAAGTGCCACCCAGAGACTGGGGCCTGT...GAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTGCCTACCCTTGGGCCCCACCTaGCCGCTCAGGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VLNSVSHSAFWGAFVECLPLGPT*PLRVLQ
Trigger: CTGCAGAACCCTGAGCGGCCAGGTGGGGCCCAAGGG...TAGGCACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AGAAAGAACACATTAAAGAAGTGCCTGGCACCCTGTAGGCCTTCTGCAGGTACCCATGGATCAGGGGGCTaGGCTGCTCGTAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RKNTLKKCLAPCRPSAGTHGSGG*AARRCH
Trigger: GTGGCACCTACGAGCAGCCCAGCCCCCTGATCCATG...GGTACCTGCAGAAGGCCTACAGGGTGCCAGGCACTTCTTTAATGTGTTCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GGTACCCCACACGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCGCTCCTCAACGGTCCTaGCGTCGAAGTGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: GTPHACLKSELPSNFQPTAPQRS*RRSGGD
Trigger: ATCACCTCCACTTCGACGCCAGGACCGTTGAGGAGC...GGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCGTGTGGGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGAGGTTCACTGAATCAATaGAGGAGGCCAGTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: VGWEREPGILLISVSHGRGSLNQ*RRPVRR
Trigger: CCTCCTAACTGGCCTCCTCCATTGATTCAGTGAACC...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp AGAAAGAACACATTAAAGAAGTGCCTGGCACCCTGTAGGCCTTCTGCAGGTACCTGGGATCACTGGGGTTaGGAGTTCCAGCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: RKNTLKKCLAPCRPSAGTWDHWG*EFQPAA
Trigger: TGCGGCTGGCTGGAACTCTCAACCCCAGTGATCCCA...GGTACCTGCAGAAGGCCTACAGGGTGCCAGGCACTTCTTTAATGTGTTCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCATCCGTCTTCACCACCTaGCGGTACACGGTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKASVFTT*RYTVRY
Trigger: ATACCGGACCGTGTACCGTCAGGTGGTGAAGACGGA...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp GCTGTGAAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGACCCCACACGCATGTCTaGAATCAGAGTTACCCAGCA +
Preference number: 4 (lower is better)
Translates to: AVKDVRRVGTSLRRRCKGPHTHV*NQSYPA
Trigger: TGCTGGGTAACTCTGATTTCAGACATGCGTGTGGGG...TCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTTCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp TCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCCCTGTGTTGTTGCCGCAGCTaGAGGGCTTGTCACACTGTG +
Preference number: 4 (lower is better)
Translates to: SLALLSVVHVHSLPVHSLCCCRS*RACHTV
Trigger: CACAGTGTGACAAGCCCTGCAGCTGCGGCAACAACA...CAGGGAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTGCCTATGGCAGCTGAGGCTGTaGTCCCGGTCGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VLNSVSHSAFWGAFVECLWQLRL*SRSQVQ
Trigger: CTGCACCTGCGACCGGGAGCACAGCCTCAGCTGCCA...TAGGCACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp TGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTGGCAGACGCCACCGTaGAGGCAGAGACAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CYPGEMPPFREVSNLFSLWQTPP*RQRQCS
Trigger: GGAGCACTGTCTCTGCCTGCACGGTGGCGTCTGCCA...CAGACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTTCCAATCCTGCAAGGTaGACCACTGTGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCSNPAR*TTVPWG
Trigger: CCCCCAGGGCACAGTGGTGCACCTTGCAGGATTGGA...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CCCAGGCTGAGCATGCACAGAAAAGGTACCCCACACGCATGTCTGAAATCAGAGGGTGGTGGTGCTCCTTaGCTTTTTGCCAGTGCCGAT +
Preference number: 4 (lower is better)
Translates to: PRLSMHRKGTPHACLKSEGGGAP*LFASAD
Trigger: ATCGGCACTGGCAAAAAGGCAAGGAGCACCACCACC...CTCTGATTTCAGACATGCGTGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGTGCCGGTCCACTCCCTaGTCCTGGCAGGGGTACACT +
Preference number: 4 (lower is better)
Translates to: CQGRANIEHKHRILAFRECRSTP*SWQGYT
Trigger: AGTGTACCCCTGCCAGGAGCAGGGAGTGGACCGGCA...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AGAAAGAACACATTAAAGAAGTGCCTGGCACCCTGTAGGCCTTCTGCAGGTACCCTGAAGGGGCGGGAGTaGGACTCCTTGGTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: RKNTLKKCLAPCRPSAGTLKGRE*DSLVVV
Trigger: TACCACCACCAAGGAGTCCCACTCCCGCCCCTTCAG...GGTACCTGCAGAAGGCCTACAGGGTGCCAGGCACTTCTTTAATGTGTTCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTTATACAACCGTGGGCTaGGGGCAAGTATGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCYTTVG*GQVWGP
Trigger: GGGCCCCCATACTTGCCCCCAGCCCACGGTTGTATA...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTGCCACACAACGGCCATaGACACACTCCTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCATQRP*THSWAQ
Trigger: CTGTGCCCAGGAGTGTGTCCATGGCCGTTGTGTGGC...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCAGTTTATGTACTCGCAGGGTGCCCCATaGCACTGGCAGCGGAACTGG +
Preference number: 4 (lower is better)
Translates to: RMSEIRVTQQLPTHQFMYSQGAP*HWQRNW
Trigger: CCAGTTCCGCTGCCAGTGCCATGGGGCACCCTGCGA...GTACATAAACTGGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCAGTTTATGTACAGGGCAGGGAGCAGATaGTGCCCATCCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RMSEIRVTQQLPTHQFMYRAGSR*CPSSQG
Trigger: CCCCTGGCTGGATGGGCACCATCTGCTCCCTGCCCT...GTACATAAACTGGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGTCCCCGTTCATCGGGTaGCAGCTGAGGCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CQGRANIEHKHRILAFRESPFIG*QLRLCS
Trigger: GGAGCACAGCCTCAGCTGCCACCCGATGAACGGGGA...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CGTTGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTCAGAGACAGTGCTCCTaGCACCCTGGCCCATGCGTG +
Preference number: 4 (lower is better)
Translates to: RCYPGEMPPFREVSNLFSQRQCS*HPGPCV
Trigger: CACGCATGGGCCAGGGTGCCAGGAGCACTGTCTCTG...ACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AACACACACACGCACAGAGCCCAGGCTGAGCATGCACAGAAAAGGTACCCCACACCACACTGGCATGGCTaGGAGCAGTTAGCACCAAAT +
Preference number: 4 (lower is better)
Translates to: NTHTHRAQAEHAQKRYPTPHWHG*EQLAPN
Trigger: ATTTGGTGCTAACTGCTCCCAGCCATGCCAGTGTGG...TGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGGCTCTGTGCGTGTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AACACACACACGCACAGAGCCCAGGCTGAGCATGCACAGAAAAGGTACCCCACAACAGGGTGTGGTAGCTaGGGTTGGAGTAGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: NTHTHRAQAEHAQKRYPTTGCGS*GWSSSD
Trigger: GTCACTACTACTCCAACCCCAGCTACCACACCCTGT...TGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGGCTCTGTGCGTGTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GCTGTGAAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAGTCAGCAGGCAGGGTaGTGTGGTTATCATGCCCTT +
Preference number: 4 (lower is better)
Translates to: AVKDVRRVGTSLRRRCKGSQQAG*CGYHAL
Trigger: AAGGGCATGATAACCACACCACCCTGCCTGCTGACT...TCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTTCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GCACTCCAGGTGTGCAGGTCCCTGTGCCAGAAAGAAGAGTGGCCTACAGGAGGACCCTTTATTGTAGAATaGGCCTGGGCCATTGCTGTA +
Preference number: 4 (lower is better)
Translates to: ALQVCRSLCQKEEWPTGGPFIVE*AWAIAV
Trigger: TACAGCAATGGCCCAGGCCCATTCTACAATAAAGGG...TCCTCCTGTAGGCCACTCTTCTTTCTGGCACAGGGACCTGCACACCTGGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCCCTGCCGGATGGTGGCATATaGGTTCTCACTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLALLSVVHVHSLPVHSLPDGGI*VLTAQG
Trigger: TCCCTGAGCAGTGAGAACCCATATGCCACCATCCGG...CAGGGAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCAGCAGGTCCCGGATGGTaGCATATGGGTTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKAAGPGW*HMGSHC
Trigger: GCAGTGAGAACCCATATGCCACCATCCGGGACCTGC...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp AGAAAGAACACATTAAAGAAGTGCCTGGCACCCTGTAGGCCTTCTGCAGGTACCGGCACACATTGGCACTaGTTGGGTGCCACACAACGG +
Preference number: 4 (lower is better)
Translates to: RKNTLKKCLAPCRPSAGTGTHWH*LGATQR
Trigger: CCGTTGTGTGGCACCCAATCAGTGCCAATGTGTGCC...GGTACCTGCAGAAGGCCTACAGGGTGCCAGGCACTTCTTTAATGTGTTCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGAGCTCCTCTTCAGAGATaGGCCCTTTATTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: VGWEREPGILLISVSHGRAPLQR*ALYCRM
Trigger: CATTCTACAATAAAGGGCTCATCTCTGAAGAGGAGC...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTGGGTGGGCACTTCCCTaGGGAGGAGGTGTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCGWALP*GGGVKE
Trigger: TTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCC...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGGAACCGCCGGGGTCTaGGAGGAGGAGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVGTAGV*EEEDWT
Trigger: TGTCCAGTCCTCCTCCTCGCAGACCCCGGCGGTTCC...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGGCCCATGCGTGTCCTaGGGGCAGCTCTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVGPCVS*GQLSLQ
Trigger: CTGCAACGAGAGCTGCCCGCAGGACACGCATGGGCC...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGGTGGTGTGGTTATCATaGCCTTGGGCCCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: CQGRANIEHKHRILAFREVVWLS*PWAPPG
Trigger: GCCAGGTGGGGCCCAAGGGCATGATAACCACACCAC...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GGCACCTTCCCACACCTGAGCTCTGCGTTGTTACCCTGGGGAAATGCCACCCTTCTACTAAATGGTAAGTaGCCTAGGACAGAACCTGTG +
Preference number: 4 (lower is better)
Translates to: GTFPHLSSALLPWGNATLLLNGK*PRTEPV
Trigger: CACAGGTTCTGTCCTAGGGCACTTACCATTTAGTAG...AAGGGTGGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTGTGGGAAGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGGTCGCCCCGCCAGCCTaGCACACATTGGCACTGATT +
Preference number: 4 (lower is better)
Translates to: CQGRANIEHKHRILAFREVAPPA*HTLALI
Trigger: AATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGAC...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTCTGGGGCACACTCACTaGAACAGTCGTCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVLGHTH*NSRRPA
Trigger: GGCGGGGCGACGACTGTTCCAGTGAGTGTGCCCCAG...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AGAAAGAACACATTAAAGAAGTGCCTGGCACCCTGTAGGCCTTCTGCAGGTACCTGGCCCCCACATTCCTaGGGCACACTCACTGGAACA +
Preference number: 4 (lower is better)
Translates to: RKNTLKKCLAPCRPSAGTWPPHS*GTLTGT
Trigger: TGTTCCAGTGAGTGTGCCCCAGGAATGTGGGGGCCA...GGTACCTGCAGAAGGCCTACAGGGTGCCAGGCACTTCTTTAATGTGTTCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GCTGTGAAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGACACAGTCACAGCGACTaGCACAACCTTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: AVKDVRRVGTSLRRRCKGHSHSD*HNLLQT
Trigger: AGTTTGGAGAAGGTTGTGCCAGTCGCTGTGACTGTG...TCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTTCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGGGGTGGCAGAAGGAGTaGTTAGCGCACTTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CQGRANIEHKHRILAFREGWQKE*LAHLQG
Trigger: GCCCTGCAAGTGCGCTAACCACTCCTTCTGCCACCC...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTTCTGCCATACCATCCTaGCTCCTCAACGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCSAIPS*LLNGPG
Trigger: GCCAGGACCGTTGAGGAGCCAGGATGGTATGGCAGA...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGAGGCCTTGGGAGCAGTaGGTTGGGAAAGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: CQGRANIEHKHRILAFRERPWEQ*VGKGSQ
Trigger: CTGGCTCCCTTTCCCAACCCACTGCTCCCAAGGCCT...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGATGTACACAGGGCCCTaGAGGCCTTGGGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CQGRANIEHKHRILAFREMYTGP*RPWEQW
Trigger: CCACTGCTCCCAAGGCCTCCAGGGCCCTGTGTACAT...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGAGCCAGGCATCCTGCTaGTCAGCGTCTCCCATGGTA +
Preference number: 4 (lower is better)
Translates to: CQGRANIEHKHRILAFRESQASC*SASPMV
Trigger: TACCATGGGAGACGCTGATCAGCAGGATGCCTGGCT...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp GGCACCTTCCCACACCTGAGCTCTGCGTTGTTACCCTGGGGAAATGCCACCCTTGGCCTTCAAAAGTTTTaGTACTGGCAGAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: GTFPHLSSALLPWGNATLGLQKF*YWQKSK
Trigger: TTTGCTCTTCTGCCAGTATCAAAACTTTTGAAGGCC...AAGGGTGGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTGTGGGAAGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp TGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTCTGGGAGGTGATGGGGGATaGCGTACTGGAGGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: CYPGEMPPFREVSNLFSLGGDGG*RTGGKS
Trigger: TGACTTGCCTCCAGTACGGCATCCCCCATCACCTCC...CAGACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp TGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTTCATGTTCACAGCCTaGCGGTCCACTCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CYPGEMPPFREVSNLFSLFMFTA*RSTPCS
Trigger: GGAGCAGGGAGTGGACCGGCAGGCTGTGAACATGAA...CAGACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCAGTTTATGTACAGGACACGTCACAGCTaGGCCCAGTTCTCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: RMSEIRVTQQLPTHQFMYRTRHS*AQFSLR
Trigger: CCGCAGAGAGAACTGGGCCCAGCTGTGACGTGTCCT...GTACATAAACTGGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCCAGGCTGAGCATGCACAGAAAAGGTACCCCACACGCATGTCTGAAATCAGAGCCATTTTGGCAAGAATaGGTGCTGGGGCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PRLSMHRKGTPHACLKSEPFWQE*VLGQKK
Trigger: CTTCTTCTGCCCCAGCACCCATTCTTGCCAAAATGG...CTCTGATTTCAGACATGCGTGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGAGTTACTGCATGTCACTaGTACTTAATTCAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VGWEREPGILLISVSHGRVTACH*YLIQSA
Trigger: GGCTGACTGAATTAAGTACCAGTGACATGCAGTAAC...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp CGTTGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTAGTGCCGATAGCCAATaGACAGTGCCACCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: RCYPGEMPPFREVSNLFSSADSQ*TVPPGL
Trigger: TAGCCCTGGTGGCACTGTTCATTGGCTATCGGCACT...ACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp TGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTTGGCACTGATTGGGTaGCACACAACGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: CYPGEMPPFREVSNLFSLLALIG*HTTAMD
Trigger: GTCCATGGCCGTTGTGTGGCACCCAATCAGTGCCAA...CAGACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGCCCCGGAATCCGGGTaGACACACGCAGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVAPESG*THAVAI
Trigger: AATGGCAACTGCGTGTGTGCACCCGGATTCCGGGGC...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGAAGGGACCCCAGCACTaGAATGCCAATCACTGCACC +
Preference number: 4 (lower is better)
Translates to: CQGRANIEHKHRILAFREKGPQH*NANHCT
Trigger: GGTGCAGTGATTGGCATTGCAGTGCTGGGGTCCCTT...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCACAGCACTGCAGGCGCTaGCGGTGGTCCGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKAQHCRR*RWSVFT
Trigger: GGTGAAGACGGACCACCGCCAGCGCCTGCAGTGCTG...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGCAGCTCTCGTTGCAGTaGAGGCCCGCCCAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMQLSLQ*RPAQPG
Trigger: GCCGGGCTGGGCGGGCCTCCACTGCAACGAGAGCTG...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCAGTTTATGTACGCCTCATGGGCACACTaGCAGCTGGCATTGCAACTG +
Preference number: 4 (lower is better)
Translates to: RMSEIRVTQQLPTHQFMYASWAH*QLALQL
Trigger: CAGTTGCAATGCCAGCTGCCAGTGTGCCCATGAGGC...GTACATAAACTGGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp TGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTCTGCAGCCTTCTAAGCAGTaGTGTCCAGTCCAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: CYPGEMPPFREVSNLFSLQPSKQ*CPVQPR
Trigger: CCTAGGCTGGACTGGACACCACTGCTTAGAAGGCTG...CAGACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCATGTGGTAGCTGGGGTTaGAGTAGTAGTGACTGTAGC +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKACGSWG*SSSDCS
Trigger: GCTACAGTCACTACTACTCCAACCCCAGCTACCACA...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CGTTGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTGGATGTGGCTGTTCTTaGGTGAGTCATAGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: RCYPGEMPPFREVSNLFSGCGCS*VSHSGR
Trigger: CCGGCCACTATGACTCACCCAAGAACAGCCACATCC...ACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCACTGCACCCCTGCCCCTaGCACCTTCCCACACCTGAG +
Preference number: 4 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKALHPCP*HLPTPE
Trigger: CTCAGGTGTGGGAAGGTGCCAGGGGCAGGGGTGCAG...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTGCCTAGAGCAGTTACCACGCTaGCAACCTTCCTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: VLNSVSHSAFWGAFVECLEQLPR*QPSLQT
Trigger: CGTCTGCAAGGAAGGTTGGCAGCGTGGTAACTGCTC...TAGGCACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCAAAGCAGGCTCCAGTCTaGGGATCGCAGGGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKAKQAPV*GSQGAP
Trigger: TGGGGCACCCTGCGATCCCCAGACTGGAGCCTGCTT...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCACAGAGGCCGCCGTTGTaGCAGCGACATTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKAQRPPL*QRHSWE
Trigger: CTCCCAGGAATGTCGCTGCCACAACGGCGGCCTCTG...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
3UTR CAA 72 bp GTTGAGTGCCTACTCTGTGCCAAGGGAGAGCTAATATaGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VECLLCAKGELI*SISTGFLPSGS
Trigger: GCTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCACAGAGTAGGCACTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
CDS-3UTR TCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGGAGCAGTTGGGTCCGTaGAAGCCCTCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMEQLGP*KPSGQG
Trigger: GCCCTGCCCAGAGGGCTTTCACGGACCCAACTGCTC...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCAAGCTGGCATTGCAACTaGAGCCCCAGGTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKASWHCN*SPRFRV
Trigger: CACCCGGAACCTGGGGCTTCAGTTGCAATGCCAGCT...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp AAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGGCTCATCTAAGGGCACACAGCGTTTaGCATAGCGGCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KSPTYSVCNCQSIQMAHLRAHSV*HSGQAD
Trigger: GTCAGCCTGGCCGCTATGGCAAACGCTGTGTGCCCT...TAGATGAGCCATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CGTTGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTGTTACCCTGGGGAAATaGCACCCTTTAGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: RCYPGEMPPFREVSNLFSVTLGK*HPLGKS
Trigger: AGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAAC...ACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AGAAAGAACACATTAAAGAAGTGCCTGGCACCCTGTAGGCCTTCTGCAGGTACCAACATACCCCACTCTTaGGATCACACGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RKNTLKKCLAPCRPSAGTNIPHS*DHTSCC
Trigger: ACAACAGCTCGTGTGATCCCAAGAGTGGGGTATGTT...GGTACCTGCAGAAGGCCTACAGGGTGCCAGGCACTTCTTTAATGTGTTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCAGTTTATGTACTCACAGCCATCAGAGTaGTCACAGTCACAGCGACTG +
Preference number: 4 (lower is better)
Translates to: RMSEIRVTQQLPTHQFMYSQPSE*SQSQRL
Trigger: CAGTCGCTGTGACTGTGACCACTCTGATGGCTGTGA...GTACATAAACTGGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGGCTCATCTAGGCAAAGAGCGGGCCTaGAACCTTGTTAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KSPTYSVCNCQSIQMAHLGKERA*NLVRGW
Trigger: CCACCCCCTAACAAGGTTCCAGGCCCGCTCTTTGCC...TAGATGAGCCATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGTGGGCAGGTCCCGGATaGTGGCATATGGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMWAGPG*WHMGSH
Trigger: GTGAGAACCCATATGCCACCATCCGGGACCTGCCCA...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCAGAGGGACATCTGGCATaGCATACTCGGAGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKAEGHLA*HTRSRP
Trigger: TGGACGGCTCCGAGTATGTCATGCCAGATGTCCCTC...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGCAAAGAGGCACCTATaGAGGCTTTCAGGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVAKRHL*RLSGRE
Trigger: CTCCCTACCTGAAAGCCTTCATAGGTGCCTCTTTGC...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGCAGGTACCTGGTGAGTaGACACAGCTGCAATCAGGG +
Preference number: 4 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMQVPGE*TQLQSG
Trigger: CCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTG...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp GGTACCCCACACGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCAAATTCTGCTACCTGTaGAGTGCAATAAATCAAGGC +
Preference number: 4 (lower is better)
Translates to: GTPHACLKSELPSNFQPTKFCYL*SAINQG
Trigger: GCCTTGATTTATTGCACTTCACAGGTAGCAGAATTT...GGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCGTGTGGGGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGTGCAGGCAGAGACAGTaGTCCTGGCACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMCRQRQ*SWHPGP
Trigger: TGGGCCAGGGTGCCAGGAGCACTGTCTCTGCCTGCA...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGGTGCACACACGCAGTTaGCATTCTCAGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMVHTRS*HSQGDR
Trigger: CCTGTCTCCCTGAGAATGGCAACTGCGTGTGTGCAC...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTCGTCCAGGCGCCCGCTaGTGTAAGCCACAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSIRPGAR*CKPQPG
Trigger: ACCTGGCTGTGGCTTACAGCAGCGGGCGCCTGGACG...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp AAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGGCTCATCTAAGGGCACTCCAGGTGTaGAGGTCCCTGTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KSPTYSVCNCQSIQMAHLRALQV*RSLCQK
Trigger: TTTCTGGCACAGGGACCTGCACACCTGGAGTGCCCT...TAGATGAGCCATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGAAGCCAGAAGTGCCCTaGGAACAGGACACGTCACAG +
Preference number: 4 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMKPEVP*EQDTSQ
Trigger: CTGTGACGTGTCCTGTTCCCAGGGCACTTCTGGCTT...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGACAGACATGCGCCGTTaGCCGGGAAGCAACGGGCGT +
Preference number: 4 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMTDMRR*PGSNGR
Trigger: ACGCCCGTTGCTTCCCGGCCAACGGCGCATGTCTGT...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCAGCTCGGAGGGACATCTaGCATGACATACTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKAARRDI*HDILGA
Trigger: GGCTCCGAGTATGTCATGCCAGATGTCCCTCCGAGC...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTTGCAGCGGTCCCCAGTaGAGCCGTGTTCGCACAGAC +
Preference number: 4 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSICSGPQ*SRVRTD
Trigger: GTCTGTGCGAACACGGCTTCACTGGGGACCGCTGCA...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp AAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGGCTCATCTAAGCGTGCAGAACAGTTaGCACCGTAGGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KSPTYSVCNCQSIQMAHLSVQNS*HRRCQE
Trigger: CTCCTGACACCTACGGTGTCAACTGTTCTGCACGCT...TAGATGAGCCATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGCTCCAGTTTGGGGGCTaGAGACTGCCTCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMLQFGG*RLPHGH
Trigger: GTGCCCATGAGGCAGTCTGCAGCCCCCAAACTGGAG...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCAAGGTGCCCCCATTCTTaGAGGTGCAGGTGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKARCPHS*RCRCCY
Trigger: GTAGCAACACCTGCACCTGCAAGAATGGGGGCACCT...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp AAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGGCTCATCTAGTGTGCAGGTCCCTGTaGCAGAAAGAAGAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: KSPTYSVCNCQSIQMAHLVCRSL*QKEEWP
Trigger: AGGCCACTCTTCTTTCTGGCACAGGGACCTGCACAC...TAGATGAGCCATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTGTGAGTGAACACAGCTaGAATCAGGGCTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: HWYLIQSATQPFGEHLLSVSEHS*NQGCER
Trigger: TCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCAC...ACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTAAGACACCTCCATTTTaGCAAGAATGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVKTPPF*QEWVLG
Trigger: CCCCAGCACCCATTCTTGCCAAAATGGAGGTGTCTT...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGGCAGGCAGGGTGGTGTaGTTATCATGCCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMAGRVV*LSCPWA
Trigger: GGCCCAAGGGCATGATAACCACACCACCCTGCCTGC...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp AAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGGCTCATCTAAGGTGTTGCTACAGTTaGCTCCCCATAAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KSPTYSVCNCQSIQMAHLRCCYS*LPISPQ
Trigger: CTGAGGGCTTATGGGGAGTCAACTGTAGCAACACCT...TAGATGAGCCATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp ACCAGCCTGTATTTTGAAATTATGAGCCATGCATTGGAAGGTTCACTGAATCAAGTGACTGGCGTGCAGTaGCAGGAACACAGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: TSLYFEIMSHALEGSLNQVTGVQ*QEHSSR
Trigger: CCTTGAACTGTGTTCCTGTCACTGCACGCCAGTCAC...TTGATTCAGTGAACCTTCCAATGCATGGCTCATAATTTCAAAATACAGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGATAGCCAATGAACAGTaGCACCAGGGCTACCACAAG +
Preference number: 4 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMIANEQ*HQGYHK
Trigger: CTTGTGGTAGCCCTGGTGGCACTGTTCATTGGCTAT...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp GGTACCCCACACGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCTATCTTAGCAGTTACTaGATGTCACTGGTACTTAAT +
Preference number: 4 (lower is better)
Translates to: GTPHACLKSELPSNFQPTYLSSY*MSLVLN
Trigger: ATTAAGTACCAGTGACATGCAGTAACTGCTAAGATA...GGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCGTGTGGGGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGGCCCCAGTCTCTGGGTaGCACTTTTCTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMAPVSG*HFSPGP
Trigger: TGGTCCTGGAGAAAAGTGCCACCCAGAGACTGGGGC...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTGCCTAATTGTAGAATGGGCCTaGGCCATTGCTGTAGCTATA +
Preference number: 4 (lower is better)
Translates to: VLNSVSHSAFWGAFVECLIVEWA*AIAVAI
Trigger: TATAGCTACAGCAATGGCCCAGGCCCATTCTACAAT...TAGGCACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTTCCACTCCCTGCTCCTaGCAGGGGTACACTAGGCTC +
Preference number: 4 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSISTPCS*QGYTRL
Trigger: GAGCCTAGTGTACCCCTGCCAGGAGCAGGGAGTGGA...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCCAGGCTGAGCATGCACAGAAAAGGTACCCCACACGCATGTCTGAAATCAGAGATGCTATTGGAAAAATaGTGCCAACAGATTTGCTTA +
Preference number: 4 (lower is better)
Translates to: PRLSMHRKGTPHACLKSEMLLEK*CQQICL
Trigger: TAAGCAAATCTGTTGGCACCATTTTTCCAATAGCAT...CTCTGATTTCAGACATGCGTGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCATGCAATGCCAATCACTaGACCCAGCGAGTTATACGC +
Preference number: 4 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKACNANH*TQRVIR
Trigger: GCGTATAACTCGCTGGGTGCAGTGATTGGCATTGCA...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGAACACATTAAAGAAGTaGCTGGCACCCTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMNTLKK*LAPCRP
Trigger: AGGCCTACAGGGTGCCAGGCACTTCTTTAATGTGTT...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCACTATTGGAAAAATGGTaGCAACAGATTTGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKALLEKW*QQICLK
Trigger: CTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAG...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTCCCAAAATGGGCACATaGTATTGGAAAAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVPKMGT*YWKNGA
Trigger: GGCACCATTTTTCCAATAGCATGTGCCCATTTTGGG...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTGTACAGGCTCCAGTTTaGGGGCTGCAGACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSIVQAPV*GLQTAS
Trigger: TGAGGCAGTCTGCAGCCCCCAAACTGGAGCCTGTAC...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTGCCACAGCCAGGTGGTaGTGCTCCTTGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSIATARW*CSLPFC
Trigger: GCAAAAAGGCAAGGAGCACCACCACCTGGCTGTGGC...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp ACCAGCCTGTATTTTGAAATTATGAGCCATGCATTGGAAGGTTCACTGAATCAAAGCTTTCCCAGAAGCTaGAGGTATTGGGATCACTGG +
Preference number: 4 (lower is better)
Translates to: TSLYFEIMSHALEGSLNQSFPRS*RYWDHW
Trigger: CCAGTGATCCCAATACCTGCAGCTTCTGGGAAAGCT...TTGATTCAGTGAACCTTCCAATGCATGGCTCATAATTTCAAAATACAGGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR GCA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGAAGGCTCCCATCACTTaGTCTGTTAAGCGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMKAPIT*SVKRCS
Trigger: TGAACAACGCTTAACAGAGCAAGTGATGGGAGCCTT...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGTGGGTGAGCAGGCGATaGCATTTTCACATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMWVSRR*HFHMSS
Trigger: GCTGCTCATGTGAAAATGCCATCGCCTGCTCACCCA...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp CCAAAATGGGCACATGCTATTGGAAAAATGGTGCCAACAGATTTGCTTAAAGCAACAGTAAAGGGCTCCTaGATTCCAATCCTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: PKWAHAIGKMVPTDLLKATVKGS*IPILQG
Trigger: ACCTTGCAGGATTGGAATCCAGGAGCCCTTTACTGT...TGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGTGGGGGATGCCGTACTaGAGGCAAGTCATAATGTCC +
Preference number: 4 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMWGMPY*RQVIMS
Trigger: GGACATTATGACTTGCCTCCAGTACGGCATCCCCCA...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTGCCTAATTGCTAGAGTTAATTaGGTTGGTTCCATCTCCCTA +
Preference number: 4 (lower is better)
Translates to: VLNSVSHSAFWGAFVECLIARVN*VGSISL
Trigger: TAGGGAGATGGAACCAACCCAATTAACTCTAGCAAT...TAGGCACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTATGGGCACATGCTATTaGAAAAATGGTGCCAACAGA +
Preference number: 4 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVMGTCY*KNGANR
Trigger: TCTGTTGGCACCATTTTTCCAATAGCATGTGCCCAT...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
3UTR CAA 72 bp CTAACCAGCCTGTATTTTGAAATTATGAGCCATGCATaGGAAGGTTCACTGAATCAATGGAGGAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LTSLYFEIMSHA*EGSLNQWRRPV
Trigger: AACTGGCCTCCTCCATTGATTCAGTGAACCTTCCAATGCATGGCTCATAATTTCAAAATACAGGCTGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
CDS-3UTR TCA 90 bp CACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTAACCAGCCTGTATTTTaGAATTATGAGCCATGCATT +
Preference number: 4 (lower is better)
Translates to: HWYLIQSATQPFGEHLLSNQPVF*NYEPCI
Trigger: AATGCATGGCTCATAATTTCAAAATACAGGCTGGTT...ACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CCA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTCGAGTTATACGCTACTaGAGTGGTCGGCATCACAGT +
Preference number: 4 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSIRVIRY*SGRHHS
Trigger: ACTGTGATGCCGACCACTCCAGTAGCGTATAACTCG...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR TCA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTGATGGCATTTTCACATaGGCAGCGTGCAGAACAGTT +
Preference number: 4 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSIDGIFT*AACRTV
Trigger: AACTGTTCTGCACGCTGCTCATGTGAAAATGCCATC...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
3UTR CAA 72 bp AAATGCAATGTAGAGACCCAAAATGGGCACATGCTATaGGAAAAATGGTGCCAACAGATTTGCTTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: KCNVETQNGHML*EKWCQQICLKQ
Trigger: CTGCTTTAAGCAAATCTGTTGGCACCATTTTTCCAATAGCATGTGCCCATTTTGGGTCTCTACATTGCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292357.7
ENST00000338302.7
CDS GCA 90 bp GCTCCTGGCACCCTGGCCCATGCGTGTCCTGCGGGCAGCTCTCGTTaGAGTGGAGGCCCGCCCAGCCCGGCAGGCAGGAGCACTCCCCGT +
Preference number: 5 (lower is better)
Translates to: APGTLAHACPAGSSR*SGGPPSPAGRSTPR
Trigger: ACGGGGAGTGCTCCTGCCTGCCGGGCTGGGCGGGCCTCCACTGCAACGAGAGCTGCCCGCAGGACACGCATGGGCCAGGGTGCCAGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 90 bp TGGCACCCTGGCCCATGCGTGTCCTGCGGGCAGCTCTCGTTGCAGTaGAGGCCCGCCCAGCCCGGCAGGCAGGAGCACTCCCCGTTCATC +
Preference number: 5 (lower is better)
Translates to: WHPGPCVSCGQLSLQ*RPAQPGRQEHSPFI
Trigger: GATGAACGGGGAGTGCTCCTGCCTGCCGGGCTGGGCGGGCCTCCACTGCAACGAGAGCTGCCCGCAGGACACGCATGGGCCAGGGTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 90 bp GCGATCCGTGCAGCGGTCCCCAGTGAAGCCGTGTTCGCACAGACATaGGCCGTTGGCCGGGAAGCAACGGGCGTCCGGGGCGCAGTCGCA +
Preference number: 5 (lower is better)
Translates to: AIRAAVPSEAVFAQT*AVGREATGVRGAVA
Trigger: TGCGACTGCGCCCCGGACGCCCGTTGCTTCCCGGCCAACGGCGCATGTCTGTGCGAACACGGCTTCACTGGGGACCGCTGCACGGATCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 90 bp ACGCCACCGTGCAGGCAGAGACAGTGCTCCTGGCACCCTGGCCCATaGGTGTCCTGCGGGCAGCTCTCGTTGCAGTGGAGGCCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: TPPCRQRQCSWHPGP*VSCGQLSLQWRPAQ
Trigger: CTGGGCGGGCCTCCACTGCAACGAGAGCTGCCCGCAGGACACGCATGGGCCAGGGTGCCAGGAGCACTGTCTCTGCCTGCACGGTGGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 90 bp AGGCCGCTGGTAGCCTGGCAGACGCCACCGTGCAGGCAGAGACAGTaGTCCTGGCACCCTGGCCCATGCGTGTCCTGCGGGCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: RPLVAWQTPPCRQRQ*SWHPGPCVSCGQLS
Trigger: CGAGAGCTGCCCGCAGGACACGCATGGGCCAGGGTGCCAGGAGCACTGTCTCTGCCTGCACGGTGGCGTCTGCCAGGCTACCAGCGGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 90 bp CTGGCAGACGCCACCGTGCAGGCAGAGACAGTGCTCCTGGCACCCTaGCCCATGCGTGTCCTGCGGGCAGCTCTCGTTGCAGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LADATVQAETVLLAP*PMRVLRAALVAVEA
Trigger: GGCCTCCACTGCAACGAGAGCTGCCCGCAGGACACGCATGGGCCAGGGTGCCAGGAGCACTGTCTCTGCCTGCACGGTGGCGTCTGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 90 bp GGAGGGGGCTCCCGGCGGTGCTTCCAGTCAGCAGGCAGGGTGGTGTaGTTATCATGCCCTTGGGCCCCACCTGGCCGCTCAGGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: GGGSRRCFQSAGRVV*LSCPWAPPGRSGFC
Trigger: GCAGAACCCTGAGCGGCCAGGTGGGGCCCAAGGGCATGATAACCACACCACCCTGCCTGCTGACTGGAAGCACCGCCGGGAGCCCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 90 bp CAGCTGGGCCCAGTTCTCTCTGCGGGGCAGAAGCAGGCTCCAGTCTaGGGATCGCAGGGTGCCCCATGGCACTGGCAGCGGAACTGGCAG +
Preference number: 5 (lower is better)
Translates to: QLGPVLSAGQKQAPV*GSQGAPWHWQRNWQ
Trigger: CTGCCAGTTCCGCTGCCAGTGCCATGGGGCACCCTGCGATCCCCAGACTGGAGCCTGCTTCTGCCCCGCAGAGAGAACTGGGCCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 90 bp CTGGTAGCCTGGCAGACGCCACCGTGCAGGCAGAGACAGTGCTCCTaGCACCCTGGCCCATGCGTGTCCTGCGGGCAGCTCTCGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LVAWQTPPCRQRQCS*HPGPCVSCGQLSLQ
Trigger: CTGCAACGAGAGCTGCCCGCAGGACACGCATGGGCCAGGGTGCCAGGAGCACTGTCTCTGCCTGCACGGTGGCGTCTGCCAGGCTACCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS-3UTR CAA 90 bp CTGCAGGCGCTGGCGGTGGTCCGTCTTCACCACCTGACGGTACACGGTCCGGTACCGCAGCTGCAGGGCTaGTCACACTGTGGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: LQALAVVRLHHLTVHGPVPQLQG*SHCGPH
Trigger: GTGGGGGCCACAGTGTGACAAGCCCTGCAGCTGCGG...TACCGGACCGTGTACCGTCAGGTGGTGAAGACGGACCACCGCCAGCGCCTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS TCA 90 bp GGCACCGATCCCCAGTGTAACCCGGAGCGCAGCGGCACTGCCCAGTaGATCGGTCACAGAGGCCGCCGTTGTGGCAGCGACATTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GTDPQCNPERSGTAQ*IGHRGRRCGSDIPG
Trigger: CCCAGGAATGTCGCTGCCACAACGGCGGCCTCTGTGACCGATTCACTGGGCAGTGCCGCTGCGCTCCGGGTTACACTGGGGATCGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292357.8
ENST00000338302.7
CDS TCA 90 bp CGTAGAAGCCGTCGGGGCAGAGGCGATCCGTGCAGCGGTCCCCAGTaGAGCCGTGTTCGCACAGACATGCGCCGTTGGCCGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: RRSRRGRGDPCSGPQ*SRVRTDMRRWPGSN
Trigger: GTTGCTTCCCGGCCAACGGCGCATGTCTGTGCGAACACGGCTTCACTGGGGACCGCTGCACGGATCGCCTCTGCCCCGACGGCTTCTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 90 bp TCCCGGCGGTGCTTCCAGTCAGCAGGCAGGGTGGTGTGGTTATCATaGCCTTGGGCCCCACCTGGCCGCTCAGGGTTCTGCAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SRRCFQSAGRVVWLS*PWAPPGRSGFCRLA
Trigger: TGCCAGCCTGCAGAACCCTGAGCGGCCAGGTGGGGCCCAAGGGCATGATAACCACACCACCCTGCCTGCTGACTGGAAGCACCGCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS TCA 90 bp CTCACCGATCCCCAGTGTAACCCGGAGCGCAGCGGCACTGCCCAGTaGATCGGTCACAGAGGCCGCCGTTGTGGCAGCGACATTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LTDPQCNPERSGTAQ*IGHRGRRCGSDIPG
Trigger: CCCAGGAATGTCGCTGCCACAACGGCGGCCTCTGTGACCGATTCACTGGGCAGTGCCGCTGCGCTCCGGGTTACACTGGGGATCGGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469390.5
CDS GCA 90 bp TCTCTCTGCGGGGCAGAAGCAGGCTCCAGTCTGGGGATCGCAGGGTaGCCCATGGCACTGGCAGCGGAACTGGCAGGCAGGGCCATAGTA +
Preference number: 5 (lower is better)
Translates to: SLCGAEAGSSLGIAG*PMALAAELAGRAIV
Trigger: TACTATGGCCCTGCCTGCCAGTTCCGCTGCCAGTGCCATGGGGCACCCTGCGATCCCCAGACTGGAGCCTGCTTCTGCCCCGCAGAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 90 bp CCACAGAGTCTCGGTCATGGATCAGGGGGCTGGGCTGCTCGTAGGTaGCACTGTCTCTCTGTGGCTGGGGTTGCCGCCGCCTCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: PQSLGHGSGGWAARR*HCLSVAGVAAASGC
Trigger: ACAGCCAGAGGCGGCGGCAACCCCAGCCACAGAGAGACAGTGGCACCTACGAGCAGCCCAGCCCCCTGATCCATGACCGAGACTCTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5
CDS CCA 90 bp GTCAGCAGGCAGGGTGGTGTGGTTATCATGCCCTTGGGCCCCACCTaGCCGCTCAGGGTTCTGCAGGCTGGCAAAGAGCGGGCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VSRQGGVVIMPLGPT*PLRVLQAGKERAWN
Trigger: GTTCCAGGCCCGCTCTTTGCCAGCCTGCAGAACCCTGAGCGGCCAGGTGGGGCCCAAGGGCATGATAACCACACCACCCTGCCTGCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS TCA 90 bp CCATGGCAGCACTGCAGGCGCTGGCGGTGGTCCGTCTTCACCACCTaGCGGTACACGGTCCGGTATACAACCGTGGGCTGGGGGCAAGTA +
Preference number: 5 (lower is better)
Translates to: PWQHCRRWRWSVFTT*RYTVRYTTVGWGQV
Trigger: TACTTGCCCCCAGCCCACGGTTGTATACCGGACCGTGTACCGTCAGGTGGTGAAGACGGACCACCGCCAGCGCCTGCAGTGCTGCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000455314.5
CDS CCA 90 bp CGGTGCTTCCAGTCAGCAGGCAGGGTGGTGTGGTTATCATGCCCTTaGGCCCCACCTGGCCGCTCAGGGTTCTGCAGGCTGGCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: RCFQSAGRVVWLSCP*APPGRSGFCRLAKS
Trigger: GCTCTTTGCCAGCCTGCAGAACCCTGAGCGGCCAGGTGGGGCCCAAGGGCATGATAACCACACCACCCTGCCTGCTGACTGGAAGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 90 bp GGGAGGGCCTTTCATCTCCATGTAGCTGCTCTCCCGGGGGCCCCCTaGCAAGCTGGGCAGGTCCCGGATGGTGGCATATGGGTTCTCACT +
Preference number: 5 (lower is better)
Translates to: GRAFHLHVAALPGAP*QAGQVPDGGIWVLT
Trigger: AGTGAGAACCCATATGCCACCATCCGGGACCTGCCCAGCTTGCCAGGGGGCCCCCGGGAGAGCAGCTACATGGAGATGAAAGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5
CDS CCA 90 bp GTACAGGCTCCAGTTTGGGGGCTGCAGACTGCCTCATGGGCACACTaGCAGCTGGCATTGCAACTGAAGCCCCAGGTTCCGGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: VQAPVWGLQTASWAH*QLALQLKPQVPGGQ
Trigger: CTGCCCACCCGGAACCTGGGGCTTCAGTTGCAATGCCAGCTGCCAGTGTGCCCATGAGGCAGTCTGCAGCCCCCAAACTGGAGCCTGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS-3UTR CAA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGACCGCAGCTGCAGGGCTaGTCACACTGTGGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: VGWEREPGILLISVSHGRPQLQG*SHCGPH
Trigger: GTGGGGGCCACAGTGTGACAAGCCCTGCAGCTGCGG...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS CCA 90 bp AGGTGTGCTGGCCTCTGCCATACCATCCTGGCTCCTCAACGGTCCTaGCGTCGAAGTGGAGGTGATGGGGGATGCCGTACTGGAGGCAAG +
Preference number: 5 (lower is better)
Translates to: RCAGLCHTILAPQRS*RRSGGDGGCRTGGK
Trigger: CTTGCCTCCAGTACGGCATCCCCCATCACCTCCACTTCGACGCCAGGACCGTTGAGGAGCCAGGATGGTATGGCAGAGGCCAGCACACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5
CDS-3UTR CAA 90 bp CTGCAGGCGCTGGCGGTGGTCCGTCTTCACCACCTGACGGTACACGGTCCGGTACAGAAGCTGCAGGTATaGGGATCACTGGGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: LQALAVVRLHHLTVHGPVQKLQV*GSLGLR
Trigger: TCTCAACCCCAGTGATCCCAATACCTGCAGCTTCTG...TACCGGACCGTGTACCGTCAGGTGGTGAAGACGGACCACCGCCAGCGCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CAA 90 bp ACTGGAACAGTCGTCGCCCCGCCAGCCTGGCACACATTGGCACTGATTGGGTGCCGGGAGTGGGACTCCTaGGTGGTGGTAGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: TGTVVAPPAWHTLALIGCREWDS*VVVVKL
Trigger: AAGCTTCACTACCACCACCAAGGAGTCCCACTCCCG...GCACCCAATCAGTGCCAATGTGTGCCAGGCTGGCGGGGCGACGACTGTTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CAA 90 bp CCGTCTTCACCACCTGACGGTACACGGTCCGGTATACAACCCCGACACAGACCAGGATCACACGAGCTGTaGTTGCCGCAGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PSSPPDGTRSGIQPRHRPGSHEL*LPQLQG
Trigger: GCCCTGCAGCTGCGGCAACAACAGCTCGTGTGATCC...TGGTCTGTGTCGGGGTTGTATACCGGACCGTGTACCGTCAGGTGGTGAAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS-3UTR CAA 90 bp CCCACATTCCTGGGGCACACTCACTGGAACAGTCGTCGCCCCGCCAGCCTGGCAGAGTTTCCTCTGAGTTaGTGGGCTGGGGGCAAGTAT +
Preference number: 5 (lower is better)
Translates to: PTFLGHTHWNSRRPASLAEFPLS*WAGGKY
Trigger: ATACTTGCCCCCAGCCCACAAACTCAGAGGAAACTC...TGCCAGGCTGGCGGGGCGACGACTGTTCCAGTGAGTGTGCCCCAGGAATGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS GCA 90 bp CTGGGCCATTGCTGTAGCTATAGCTGTAGCTTCGGTCCAGGCGGCTaGTCCCTGAGGAGGAGGAGGCAACTGGTAATCAGCCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: LGHCCSYSCSFGPGG*SLRRRRQLVISPLS
Trigger: GGACAGAGGGCTGATTACCAGTTGCCTCCTCCTCCTCAGGGAGCAGCCGCCTGGACCGAAGCTACAGCTATAGCTACAGCAATGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465101.1
CDS-3UTR CAA 90 bp AACACACACACGCACAGAGCCCAGGCTGAGCATGCACAGAAAAGGTACCCCACAGTGGTTATCATGCCCTaGGGCCCCACCTGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: NTHTHRAQAEHAQKRYPTVVIMP*GPTWPL
Trigger: GAGCGGCCAGGTGGGGCCCAAGGGCATGATAACCAC...TGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGGCTCTGTGCGTGTGTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp GCTGTGAAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAACAGAGGCGGTGACATaGCAGAGGCCAGGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: AVKDVRRVGTSLRRRCKGTEAVT*QRPGGA
Trigger: GGCCCCACCTGGCCTCTGCAATGTCACCGCCTCTGT...TCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTTCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS TCA 90 bp CCAGGTGGTGGTGCTCCTTGCCTTTTTGCCAGTGCCGATAGCCAATaGACAGTGCCACCAGGGCTACCACAAGGGACCCCAGCACTGCAA +
Preference number: 5 (lower is better)
Translates to: PGGGAPCLFASADSQ*TVPPGLPQGTPALQ
Trigger: TTGCAGTGCTGGGGTCCCTTGTGGTAGCCCTGGTGGCACTGTTCATTGGCTATCGGCACTGGCAAAAAGGCAAGGAGCACCACCACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 90 bp CATGAACAGGGTCACAGCCATCAGAGTGGTCACAGTCACAGCGACTaGCACAACCTTCTCCAAACTGCCCCTTCGGACAGGGCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: HEQGHSHQSGHSHSD*HNLLQTAPSDRAAG
Trigger: GCCAGCTGCCCTGTCCGAAGGGGCAGTTTGGAGAAGGTTGTGCCAGTCGCTGTGACTGTGACCACTCTGATGGCTGTGACCCTGTTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS TCA 90 bp CCATACCATCCTGGCTCCTCAACGGTCCTGGCGTCGAAGTGGAGGTaGTGGGGGATGCCGTACTGGAGGCAAGTCATAATGTCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: PYHPGSSTVLASKWR*WGMPYWRQVIMSRD
Trigger: ATCCCTGGACATTATGACTTGCCTCCAGTACGGCATCCCCCATCACCTCCACTTCGACGCCAGGACCGTTGAGGAGCCAGGATGGTATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5
CDS GCA 90 bp AAGGGCAAGAACATACCCCACTCTTGGGATCACACGAGCTGTTGTTaGCGCAGCTGCAGGGCTTGTCACACTGTGGCCCCCACATTCCTG +
Preference number: 5 (lower is better)
Translates to: KGKNIPHSWDHTSCC*RSCRACHTVAPTFL
Trigger: CAGGAATGTGGGGGCCACAGTGTGACAAGCCCTGCAGCTGCGGCAACAACAGCTCGTGTGATCCCAAGAGTGGGGTATGTTCTTGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000455314.5
ENST00000469390.5
CDS GCA 90 bp ACAGTAAAGGGCTCCTGGATTCCAATCCTGCAAGGTGCACCACTGTaGCCTGGGGGACATACACAGGCCCCAGTCTCTGGGTGGCACTTT +
Preference number: 5 (lower is better)
Translates to: TVKGSWIPILQGAPL*PGGHTQAPVSGWHF
Trigger: AAAGTGCCACCCAGAGACTGGGGCCTGTGTATGTCCCCCAGGGCACAGTGGTGCACCTTGCAGGATTGGAATCCAGGAGCCCTTTACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 90 bp CACCAGGGCTACCACAAGGGACCCCAGCACTGCAATGCCAATCACTaGACCCAGCGAGTTATACGCTACTGGAGTGGTCGGCATCACAGT +
Preference number: 5 (lower is better)
Translates to: HQGYHKGPQHCNANH*TQRVIRYWSGRHHS
Trigger: ACTGTGATGCCGACCACTCCAGTAGCGTATAACTCGCTGGGTGCAGTGATTGGCATTGCAGTGCTGGGGTCCCTTGTGGTAGCCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 90 bp AGTTACCACGCTGCCAACCTTCCTTGCAGACGCACTCGCCGTCGATaGGTGAGCAGGCGATGGCATTTTCACATGAGCAGCGTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: SYHAANLPCRRTRRR*VSRRWHFHMSSVQN
Trigger: GTTCTGCACGCTGCTCATGTGAAAATGCCATCGCCTGCTCACCCATCGACGGCGAGTGCGTCTGCAAGGAAGGTTGGCAGCGTGGTAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 90 bp CCAGTCTCTGGGTGGCACTTTTCTCCAGGACCACACTGGCATGGCTaGGAGCAGTTAGCACCAAATGTCCCCAGAGGGCAGCCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: PVSGWHFSPGPHWHG*EQLAPNVPRGQPSK
Trigger: CTTAGAAGGCTGCCCTCTGGGGACATTTGGTGCTAACTGCTCCCAGCCATGCCAGTGTGGTCCTGGAGAAAAGTGCCACCCAGAGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS-3UTR CAA 90 bp CCCATCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCGGATCACACGAGCTGTaGTTGCCGCAGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PITCSVKRCSCSQPAGPLGSHEL*LPQLQG
Trigger: GCCCTGCAGCTGCGGCAACAACAGCTCGTGTGATCC...GAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS GCA 90 bp GCCAATGAACAGTGCCACCAGGGCTACCACAAGGGACCCCAGCACTaGAATGCCAATCACTGCACCCAGCGAGTTATACGCTACTGGAGT +
Preference number: 5 (lower is better)
Translates to: ANEQCHQGYHKGPQH*NANHCTQRVIRYWS
Trigger: ACTCCAGTAGCGTATAACTCGCTGGGTGCAGTGATTGGCATTGCAGTGCTGGGGTCCCTTGTGGTAGCCCTGGTGGCACTGTTCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 90 bp GTGGTGCTCCTTGCCTTTTTGCCAGTGCCGATAGCCAATGAACAGTaGCACCAGGGCTACCACAAGGGACCCCAGCACTGCAATGCCAAT +
Preference number: 5 (lower is better)
Translates to: VVLLAFLPVPIANEQ*HQGYHKGPQHCNAN
Trigger: ATTGGCATTGCAGTGCTGGGGTCCCTTGTGGTAGCCCTGGTGGCACTGTTCATTGGCTATCGGCACTGGCAAAAAGGCAAGGAGCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS-3UTR CAA 90 bp TGCCAAGGGAGAGCTAATATTGAGCATAAGCACAGGATTCTTGCCTTCAGGGAGCACAGACATGCGCCGTaGGCCGGGAAGCAACGGGCG +
Preference number: 5 (lower is better)
Translates to: CQGRANIEHKHRILAFREHRHAP*AGKQRA
Trigger: CGCCCGTTGCTTCCCGGCCAACGGCGCATGTCTGTG...CTCCCTGAAGGCAAGAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp GCTGTGAAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAGGTGCACACACGCAGTaGCCATTCTCAGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: AVKDVRRVGTSLRRRCKGGAHTQ*PFSGRQ
Trigger: CTGTCTCCCTGAGAATGGCAACTGCGTGTGTGCACC...TCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTTCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS CCA 90 bp CATGAACAGGGTCACAGCCATCAGAGTGGTCACAGTCACAGCGACTaGCACAACCTTCTCCAAACTGCCCCTTCTTGGAGAAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: HEQGHSHQSGHSHSD*HNLLQTAPSWRRSG
Trigger: CCCACTCCTTCTCCAAGAAGGGGCAGTTTGGAGAAGGTTGTGCCAGTCGCTGTGACTGTGACCACTCTGATGGCTGTGACCCTGTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482505.1
CDS-3UTR CAA 90 bp CACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTCGCTGCCAACCTTCCTaGCAGACGCACTCGCCGTCG +
Preference number: 5 (lower is better)
Translates to: HWYLIQSATQPFGEHLLSRCQPS*QTHSPS
Trigger: CGACGGCGAGTGCGTCTGCAAGGAAGGTTGGCAGCG...ACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp AAAGATGTACGGAGGGTGGGCACTTCCCTGAGGAGGAGGTGTAAAGGAAAAGCAGAGTGGTTAGCGCACTaGCAGGGCACACAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: KDVRRVGTSLRRRCKGKAEWLAH*QGTQRL
Trigger: CAAACGCTGTGTGCCCTGCAAGTGCGCTAACCACTC...TGCTTTTCCTTTACACCTCCTCCTCAGGGAAGTGCCCACCCTCCGTACATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp AACACACACACGCACAGAGCCCAGGCTGAGCATGCACAGAAAAGGTACCCCACAGTGCTCCTTGCCTTTTaGCCAGTGCCGATAGCCAAT +
Preference number: 5 (lower is better)
Translates to: NTHTHRAQAEHAQKRYPTVLLAF*PVPIAN
Trigger: ATTGGCTATCGGCACTGGCAAAAAGGCAAGGAGCAC...TGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGGCTCTGTGCGTGTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp GTGGGTTGGGAAAGGGAGCCAGGCATCCTGCTGATCAGCGTCTCCCATGGTAGAATAAGCACAGGATTCTaGCCTTCAGGGAGCTTACAG +
Preference number: 5 (lower is better)
Translates to: VGWEREPGILLISVSHGRISTGF*PSGSLQ
Trigger: CTGTAAGCTCCCTGAAGGCAAGAATCCTGTGCTTAT...TCTACCATGGGAGACGCTGATCAGCAGGATGCCTGGCTCCCTTTCCCAACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp TGTTACCCTGGGGAAATGCCACCCTTTAGGGAAGTCTCCAACTTATTCAGTCTGCCAGCCTGGCACACATaGGCACTGATTGGGTGCCAC +
Preference number: 5 (lower is better)
Translates to: CYPGEMPPFREVSNLFSLPAWHT*ALIGCH
Trigger: GTGGCACCCAATCAGTGCCAATGTGTGCCAGGCTGG...CAGACTGAATAAGTTGGAGACTTCCCTAAAGGGTGGCATTTCCCCAGGGTAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp CGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCAGTTTATGTACTCACAGAGGCCGCCGTaGTGGCAGCGACATTCCTGG +
Preference number: 5 (lower is better)
Translates to: RMSEIRVTQQLPTHQFMYSQRPP*WQRHSW
Trigger: CCAGGAATGTCGCTGCCACAACGGCGGCCTCTGTGA...GTACATAAACTGGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp CGCATGTCTGAAATCAGAGTTACCCAGCAACTTCCAACCCACCAGTTTATGTACGGTACAGGCTCCAGTTaGGGGGCTGCAGACTGCCTC +
Preference number: 5 (lower is better)
Translates to: RMSEIRVTQQLPTHQFMYGTGSS*GAADCL
Trigger: GAGGCAGTCTGCAGCCCCCAAACTGGAGCCTGTACC...GTACATAAACTGGTGGGTTGGAAGTTGCTGGGTAACTCTGATTTCAGACATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp TCACTTGCTCTGTTAAGCGTTGTTCATGTTCACAGCCTGCCGGTCCACTCCCTGTTGCAGGTGCAGGTGTaGCTACAGTTGACTCCCCAT +
Preference number: 5 (lower is better)
Translates to: SLALLSVVHVHSLPVHSLLQVQV*LQLTPH
Trigger: ATGGGGAGTCAACTGTAGCAACACCTGCACCTGCAA...CAGGGAGTGGACCGGCAGGCTGTGAACATGAACAACGCTTAACAGAGCAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTCAGGTGCCCCCATTCTaGCAGGTGCAGGTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCQVPPF*QVQVLL
Trigger: TAGCAACACCTGCACCTGCAAGAATGGGGGCACCTG...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp AGAAAGAACACATTAAAGAAGTGCCTGGCACCCTGTAGGCCTTCTGCAGGTACCAGGTGGTGGTGCTCCTaGCCTTTTTGCCAGTGCCGA +
Preference number: 5 (lower is better)
Translates to: RKNTLKKCLAPCRPSAGTRWWCS*PFCQCR
Trigger: TCGGCACTGGCAAAAAGGCAAGGAGCACCACCACCT...GGTACCTGCAGAAGGCCTACAGGGTGCCAGGCACTTCTTTAATGTGTTCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp GTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTGCCTACGGGAGTGGGACTCCTaGGTGGTGGTAGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: VLNSVSHSAFWGAFVECLREWDS*VVVVKL
Trigger: AAGCTTCACTACCACCACCAAGGAGTCCCACTCCCG...TAGGCACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp TTCTGCAGGTACCTGGTGAGTGAACACAGCTGCAATCAGGGCTGTGAAAGATGTGAACATACCCCACTCTaGGGATCACACGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: FCRYLVSEHSCNQGCERCEHTPL*GSHELL
Trigger: CAACAGCTCGTGTGATCCCAAGAGTGGGGTATGTTC...ACATCTTTCACAGCCCTGATTGCAGCTGTGTTCACTCACCAGGTACCTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTTGCGGGCAGCTCTCGTaGCAGTGGAGGCCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSICGQLS*QWRPAQ
Trigger: CTGGGCGGGCCTCCACTGCAACGAGAGCTGCCCGCA...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp AAATATTGCAAGCAATTACCAAAATGCAATGTAGAGACCCAAAATGGGCACATGTCTCTGTGGCTGGGGTaGCCGCCGCCTCTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: KYCKQLPKCNVETQNGHMSLWLG*PPPLAV
Trigger: GACAGCCAGAGGCGGCGGCAACCCCAGCCACAGAGA...CATGTGCCCATTTTGGGTCTCTACATTGCATTTTGGTAATTGCTTGCAATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp CACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTCAGAAGCTGCAGGTATaGGGATCACTGGGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: HWYLIQSATQPFGEHLLSQKLQV*GSLGLR
Trigger: TCTCAACCCCAGTGATCCCAATACCTGCAGCTTCTG...ACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp GTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTGCCTACAGGTGTTGCTACAGTaGACTCCCCATAAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: VLNSVSHSAFWGAFVECLQVLLQ*TPHKPS
Trigger: TGAGGGCTTATGGGGAGTCAACTGTAGCAACACCTG...TAGGCACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp CCCAGGCTGAGCATGCACAGAAAAGGTACCCCACACGCATGTCTGAAATCAGAGAAGGGAGAGCTAATATaGAGCATAAGCACAGGATTC +
Preference number: 5 (lower is better)
Translates to: PRLSMHRKGTPHACLKSEKGELI*SISTGF
Trigger: GAATCCTGTGCTTATGCTCAATATTAGCTCTCCCTT...CTCTGATTTCAGACATGCGTGTGGGGTACCTTTTCTGTGCATGCTCAGCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp ACCAGCCTGTATTTTGAAATTATGAGCCATGCATTGGAAGGTTCACTGAATCAACACCTGAGCTCTGCGTaGTTACCCTGGGGAAATGCC +
Preference number: 5 (lower is better)
Translates to: TSLYFEIMSHALEGSLNQHLSSA*LPWGNA
Trigger: GGCATTTCCCCAGGGTAACAACGCAGAGCTCAGGTG...TTGATTCAGTGAACCTTCCAATGCATGGCTCATAATTTCAAAATACAGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp CACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTGAGTAATGGGCACATGCTATaGGAAAAATGGTGCCAACAG +
Preference number: 5 (lower is better)
Translates to: HWYLIQSATQPFGEHLLSNGHML*EKWCQQ
Trigger: CTGTTGGCACCATTTTTCCAATAGCATGTGCCCATT...ACTCAACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp ATGTCACTGGTACTTAATTCAGTCAGCCACTCAGCCTTTTGGGGAGCATTTGTTATGGTGCCAACAGATTaGCTTAAAGCAGTGTTGACA +
Preference number: 5 (lower is better)
Translates to: MSLVLNSVSHSAFWGAFVMVPTD*LKAVLT
Trigger: TGTCAACACTGCTTTAAGCAAATCTGTTGGCACCAT...AACAAATGCTCCCCAAAAGGCTGAGTGGCTGACTGAATTAAGTACCAGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp CCTTTAGGGAAGTCTCCAACTTATTCAGTCTGTAACTGTCAGAGCATACAGATGGCTTTTCTTAACCTATaGCTGTCACATATATGTCCC +
Preference number: 5 (lower is better)
Translates to: PLGKSPTYSVCNCQSIQMAFLNL*LSHICP
Trigger: GGGACATATATGTGACAGCAATAGGTTAAGAAAAGC...CATCTGTATGCTCTGACAGTTACAGACTGAATAAGTTGGAGACTTCCCTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS-3UTR CAA 90 bp GCTTTGCTTTTCTTAACCTATTGCTGTCACATATATGTCCCAAAACCTTCAATTCCAGTTAGGAGGCTATaGCTAGAGTTAATTGGGTTG +
Preference number: 5 (lower is better)
Translates to: ALLFLTYCCHIYVPKPSIPVRRL*LELIGL
Trigger: CAACCCAATTAACTCTAGCAATAGCCTCCTAACTGG...AATTGAAGGTTTTGGGACATATATGTGACAGCAATAGGTTAAGAAAAGCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338302.7
CDS CAA 90 bp TGCTCCTGGCACCCTGGCCCATGCGTGTCCTGCGGGCAGCTCTCGTaGCAGTGGAGGCCCGCCCAGCCCGGCAGGCAGGAGCACTCCCCG +
Preference number: 6 (lower is better)
Translates to: CSWHPGPCVSCGQLS*QWRPAQPGRQEHSP
Trigger: CGGGGAGTGCTCCTGCCTGCCGGGCTGGGCGGGCCTCCACTGCAACGAGAGCTGCCCGCAGGACACGCATGGGCCAGGGTGCCAGGAGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp GCAGCGGTCCCCAGTGAAGCCGTGTTCGCACAGACATaGGCCGTTGGCCGGGAAGCAACGGGCGTCCGGGGC +
Preference number: 6 (lower is better)
Translates to: AAVPSEAVFAQT*AVGREATGVRG
Trigger: GCCCCGGACGCCCGTTGCTTCCCGGCCAACGGCGCATGTCTGTGCGAACACGGCTTCACTGGGGACCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CAA 90 bp GTGCAGCGGTCCCCAGTGAAGCCGTGTTCGCACAGACATGCGCCGTaGGCCGGGAAGCAACGGGCGTCCGGGGCGCAGTCGCACGTCTCA +
Preference number: 6 (lower is better)
Translates to: VQRSPVKPCSHRHAP*AGKQRASGAQSHVS
Trigger: TGAGACGTGCGACTGCGCCCCGGACGCCCGTTGCTTCCCGGCCAACGGCGCATGTCTGTGCGAACACGGCTTCACTGGGGACCGCTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS TCA 72 bp CGTCGGGGCAGAGGCGATCCGTGCAGCGGTCCCCAGTaGAGCCGTGTTCGCACAGACATGCGCCGTTGGCCG +
Preference number: 6 (lower is better)
Translates to: RRGRGDPCSGPQ*SRVRTDMRRWP
Trigger: CGGCCAACGGCGCATGTCTGTGCGAACACGGCTTCACTGGGGACCGCTGCACGGATCGCCTCTGCCCCGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp GGGGCAGAAGCAGGCTCCAGTCTGGGGATCGCAGGGTaGCCCATGGCACTGGCAGCGGAACTGGCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: GAEAGSSLGIAG*PMALAAELAGR
Trigger: CCTGCCTGCCAGTTCCGCTGCCAGTGCCATGGGGCACCCTGCGATCCCCAGACTGGAGCCTGCTTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp GTAGCCTGGCAGACGCCACCGTGCAGGCAGAGACAGTaGTCCTGGCACCCTGGCCCATGCGTGTCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: VAWQTPPCRQRQ*SWHPGPCVSCG
Trigger: CCCGCAGGACACGCATGGGCCAGGGTGCCAGGAGCACTGTCTCTGCCTGCACGGTGGCGTCTGCCAGGCTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CAA 72 bp TCCCCAGTGAAGCCGTGTTCGCACAGACATGCGCCGTaGGCCGGGAAGCAACGGGCGTCCGGGGCGCAGTCG +
Preference number: 6 (lower is better)
Translates to: SPVKPCSHRHAP*AGKQRASGAQS
Trigger: CGACTGCGCCCCGGACGCCCGTTGCTTCCCGGCCAACGGCGCATGTCTGTGCGAACACGGCTTCACTGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS TCA 72 bp CCCCAGTGTAACCCGGAGCGCAGCGGCACTGCCCAGTaGATCGGTCACAGAGGCCGCCGTTGTGGCAGCGAC +
Preference number: 6 (lower is better)
Translates to: PQCNPERSGTAQ*IGHRGRRCGSD
Trigger: GTCGCTGCCACAACGGCGGCCTCTGTGACCGATTCACTGGGCAGTGCCGCTGCGCTCCGGGTTACACTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp CTCGGTCATGGATCAGGGGGCTGGGCTGCTCGTAGGTaGCACTGTCTCTCTGTGGCTGGGGTTGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: LGHGSGGWAARR*HCLSVAGVAAA
Trigger: GGCGGCGGCAACCCCAGCCACAGAGAGACAGTGGCACCTACGAGCAGCCCAGCCCCCTGATCCATGACCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5
CDS CCA 72 bp GGCCGCCGTTGTGGCAGCGACATTCCTGGGAGCAGTTaGGTCCGTGAAAGCCCTCTGGGCAGGGCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: GRRCGSDIPGSS*VRESPLGRAGS
Trigger: GCTCCCTGCCCTGCCCAGAGGGCTTTCACGGACCCAACTGCTCCCAGGAATGTCGCTGCCACAACGGCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 72 bp TCCCGGCGGTGCTTCCAGTCAGCAGGCAGGGTGGTGTaGTTATCATGCCCTTGGGCCCCACCTGGCCGCTCA +
Preference number: 6 (lower is better)
Translates to: SRRCFQSAGRVV*LSCPWAPPGRS
Trigger: TGAGCGGCCAGGTGGGGCCCAAGGGCATGATAACCACACCACCCTGCCTGCTGACTGGAAGCACCGCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS TCA 72 bp CACTGCAGGCGCTGGCGGTGGTCCGTCTTCACCACCTaGCGGTACACGGTCCGGTATACAACCGTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: HCRRWRWSVFTT*RYTVRYTTVGW
Trigger: CCAGCCCACGGTTGTATACCGGACCGTGTACCGTCAGGTGGTGAAGACGGACCACCGCCAGCGCCTGCAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000455314.5
CDS GCA 72 bp GAGATCCTGAGGGAGGGCCTTTCATCTCCATGTAGCTaGTCTCCCGGGGGCCCCCTGGCAAGCTGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: EILREGLSSPCS*SPGGPLASWAG
Trigger: ACCTGCCCAGCTTGCCAGGGGGCCCCCGGGAGAGCAGCTACATGGAGATGAAAGGCCCTCCCTCAGGATCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5
CDS CCA 72 bp CAGGGTGGTGTGGTTATCATGCCCTTGGGCCCCACCTaGCCGCTCAGGGTTCTGCAGGCTGGCAAAGAGCGG +
Preference number: 6 (lower is better)
Translates to: QGGVVIMPLGPT*PLRVLQAGKER
Trigger: CCGCTCTTTGCCAGCCTGCAGAACCCTGAGCGGCCAGGTGGGGCCCAAGGGCATGATAACCACACCACCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 72 bp CAGTCAGCAGGCAGGGTGGTGTGGTTATCATGCCCTTaGGCCCCACCTGGCCGCTCAGGGTTCTGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: QSAGRVVWLSCP*APPGRSGFCRL
Trigger: CAGCCTGCAGAACCCTGAGCGGCCAGGTGGGGCCCAAGGGCATGATAACCACACCACCCTGCCTGCTGACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 72 bp CCCTGGCAAGCTGGGCAGGTCCCGGATGGTGGCATATaGGTTCTCACTGCTCAGGGAAGCCACACTGGCCCC +
Preference number: 6 (lower is better)
Translates to: PWQAGQVPDGGI*VLTAQGSHTGP
Trigger: GGGGCCAGTGTGGCTTCCCTGAGCAGTGAGAACCCATATGCCACCATCCGGGACCTGCCCAGCTTGCCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5
CDS CAA 72 bp CTGCTCGTAGGTGCCACTGTCTCTCTGTGGCTGGGGTaGCCGCCGCCTCTGGCTGTCCCAGAACTGAGGAGG +
Preference number: 6 (lower is better)
Translates to: LLVGATVSLWLG*PPPLAVPELRR
Trigger: CCTCCTCAGTTCTGGGACAGCCAGAGGCGGCGGCAACCCCAGCCACAGAGAGACAGTGGCACCTACGAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5
CDS CAA 90 bp GCGGTGCTTCCAGTCAGCAGGCAGGGTGGTGTGGTTATCATGCCCTaGGGCCCCACCTGGCCGCTCAGGGTTCTGCAGGCTGGCAAAGAG +
Preference number: 6 (lower is better)
Translates to: AVLPVSRQGGVVIMP*GPTWPLRVLQAGKE
Trigger: CTCTTTGCCAGCCTGCAGAACCCTGAGCGGCCAGGTGGGGCCCAAGGGCATGATAACCACACCACCCTGCCTGCTGACTGGAAGCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp GGAACAGGACACGTCACAGCTGGGCCCAGTTCTCTCTaGGGGGCAGAAGCAGGCTCCAGTCTGGGGATCGCA +
Preference number: 6 (lower is better)
Translates to: GTGHVTAGPSSL*GAEAGSSLGIA
Trigger: TGCGATCCCCAGACTGGAGCCTGCTTCTGCCCCGCAGAGAGAACTGGGCCCAGCTGTGACGTGTCCTGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 72 bp TTTCATCTCCATGTAGCTGCTCTCCCGGGGGCCCCCTaGCAAGCTGGGCAGGTCCCGGATGGTGGCATATGG +
Preference number: 6 (lower is better)
Translates to: FHLHVAALPGAP*QAGQVPDGGIW
Trigger: CCATATGCCACCATCCGGGACCTGCCCAGCTTGCCAGGGGGCCCCCGGGAGAGCAGCTACATGGAGATGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5
CDS CAA 90 bp GGGAGACAGGTGCCCCCATTCTTGCAGGTGCAGGTGTTGCTACAGTaGACTCCCCATAAGCCCTCAGGGCAGGACAGGTGGCAGCGGGCA +
Preference number: 6 (lower is better)
Translates to: GRQVPPFLQVQVLLQ*TPHKPSGQDRWQRA
Trigger: TGCCCGCTGCCACCTGTCCTGCCCTGAGGGCTTATGGGGAGTCAACTGTAGCAACACCTGCACCTGCAAGAATGGGGGCACCTGTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
ENST00000482505.1
CDS GCA 72 bp ACAGGATCTCTGGCAGGAGGGGCCCCGGAATCCGGGTaGACACACGCAGTTGCCATTCTCAGGGAGACAGGT +
Preference number: 6 (lower is better)
Translates to: TGSLAGGAPESG*THAVAILRETG
Trigger: ACCTGTCTCCCTGAGAATGGCAACTGCGTGTGTGCACCCGGATTCCGGGGCCCCTCCTGCCAGAGATCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp GGCTCCTGGATTCCAATCCTGCAAGGTGCACCACTGTaGCCTGGGGGACATACACAGGCCCCAGTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: GSWIPILQGAPL*PGGHTQAPVSG
Trigger: CCCAGAGACTGGGGCCTGTGTATGTCCCCCAGGGCACAGTGGTGCACCTTGCAGGATTGGAATCCAGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp CTCACATCTCTGGCAGGAGGGGCCCCGGAATCCGGGTaGACACACGCAGTTGCCATTCTCAGGGAGACAGGT +
Preference number: 6 (lower is better)
Translates to: LTSLAGGAPESG*THAVAILRETG
Trigger: ACCTGTCTCCCTGAGAATGGCAACTGCGTGTGTGCACCCGGATTCCGGGGCCCCTCCTGCCAGAGATGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482505.1
CDS CCA 72 bp CCAGTTTGGGGGCTGCAGACTGCCTCATGGGCACACTaGCAGCTGGCATTGCAACTGAAGCCCCAGGTTCCG +
Preference number: 6 (lower is better)
Translates to: PVWGLQTASWAH*QLALQLKPQVP
Trigger: CGGAACCTGGGGCTTCAGTTGCAATGCCAGCTGCCAGTGTGCCCATGAGGCAGTCTGCAGCCCCCAAACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 72 bp GGCCTCTGCCATACCATCCTGGCTCCTCAACGGTCCTaGCGTCGAAGTGGAGGTGATGGGGGATGCCGTACT +
Preference number: 6 (lower is better)
Translates to: GLCHTILAPQRS*RRSGGDGGCRT
Trigger: AGTACGGCATCCCCCATCACCTCCACTTCGACGCCAGGACCGTTGAGGAGCCAGGATGGTATGGCAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5
CDS GCA 72 bp GGTGCAGGTACAGGCTCCAGTTTGGGGGCTGCAGACTaGCTCATGGGCACACTGGCAGCTGGCATTGCAACT +
Preference number: 6 (lower is better)
Translates to: GAGTGSSLGAAD*LMGTLAAGIAT
Trigger: AGTTGCAATGCCAGCTGCCAGTGTGCCCATGAGGCAGTCTGCAGCCCCCAAACTGGAGCCTGTACCTGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 72 bp GGGGGTTTGGGGAGCACTGCGACAGGGTGTGGTAGCTaGGGTTGGAGTAGTAGTGACTGTAGCTCGGAGGGA +
Preference number: 6 (lower is better)
Translates to: GGLGSTATGCGS*GWSSSDCSSEG
Trigger: TCCCTCCGAGCTACAGTCACTACTACTCCAACCCCAGCTACCACACCCTGTCGCAGTGCTCCCCAAACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CAA 90 bp CCCGCTGCTGTAAGCCACAGCCAGGTGGTGGTGCTCCTTGCCTTTTaGCCAGTGCCGATAGCCAATGAACAGTGCCACCAGGGCTACCAC +
Preference number: 6 (lower is better)
Translates to: PAAVSHSQVVVLLAF*PVPIANEQCHQGYH
Trigger: GTGGTAGCCCTGGTGGCACTGTTCATTGGCTATCGGCACTGGCAAAAAGGCAAGGAGCACCACCACCTGGCTGTGGCTTACAGCAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS TCA 72 bp TTTCCCAGAAGCTGCAGGTATTGGGATCACTGGGGTTaGGAGTTCCAGCCAGCCGCAGGCCCACAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: FPRSCRYWDHWG*EFQPAAGPQPG
Trigger: TCCTGGCTGTGGGCCTGCGGCTGGCTGGAACTCTCAACCCCAGTGATCCCAATACCTGCAGCTTCTGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000444016.5
ENST00000455314.5
CDS TCA 72 bp CCTGGCTCCTCAACGGTCCTGGCGTCGAAGTGGAGGTaGTGGGGGATGCCGTACTGGAGGCAAGTCATAATG +
Preference number: 6 (lower is better)
Translates to: PGSSTVLASKWR*WGMPYWRQVIM
Trigger: CATTATGACTTGCCTCCAGTACGGCATCCCCCATCACCTCCACTTCGACGCCAGGACCGTTGAGGAGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5
CDS GCA 72 bp CACAGTAAAGGGCTCCTGGATTCCAATCCTGCAAGGTaGACCACTGTGCCCTGGGGGACATACACAGGCCCC +
Preference number: 6 (lower is better)
Translates to: HSKGLLDSNPAR*TTVPWGTYTGP
Trigger: GGGGCCTGTGTATGTCCCCCAGGGCACAGTGGTGCACCTTGCAGGATTGGAATCCAGGAGCCCTTTACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp CAGTGCCACCAGGGCTACCACAAGGGACCCCAGCACTaGAATGCCAATCACTGCACCCAGCGAGTTATACGC +
Preference number: 6 (lower is better)
Translates to: QCHQGYHKGPQH*NANHCTQRVIR
Trigger: GCGTATAACTCGCTGGGTGCAGTGATTGGCATTGCAGTGCTGGGGTCCCTTGTGGTAGCCCTGGTGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 72 bp GCTGCCAACCTTCCTTGCAGACGCACTCGCCGTCGATaGGTGAGCAGGCGATGGCATTTTCACATGAGCAGC +
Preference number: 6 (lower is better)
Translates to: AANLPCRRTRRR*VSRRWHFHMSS
Trigger: GCTGCTCATGTGAAAATGCCATCGCCTGCTCACCCATCGACGGCGAGTGCGTCTGCAAGGAAGGTTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 72 bp GGGTGGCACTTTTCTCCAGGACCACACTGGCATGGCTaGGAGCAGTTAGCACCAAATGTCCCCAGAGGGCAG +
Preference number: 6 (lower is better)
Translates to: GWHFSPGPHWHG*EQLAPNVPRGQ
Trigger: CTGCCCTCTGGGGACATTTGGTGCTAACTGCTCCCAGCCATGCCAGTGTGGTCCTGGAGAAAAGTGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CAA 72 bp GTGCCCCCATTCTTGCAGGTGCAGGTGTTGCTACAGTaGACTCCCCATAAGCCCTCAGGGCAGGACAGGTGG +
Preference number: 6 (lower is better)
Translates to: VPPFLQVQVLLQ*TPHKPSGQDRW
Trigger: CCACCTGTCCTGCCCTGAGGGCTTATGGGGAGTCAACTGTAGCAACACCTGCACCTGCAAGAATGGGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
ENST00000482505.1
CDS CAA 90 bp CCATTCTCAGGGAGACAGGTGCCCCCATTCTTGCAGGTGCAGGTGTaGCTACAGTTGACTCCCCATAAGCCCTCAGGGCAGGACAGGTGG +
Preference number: 6 (lower is better)
Translates to: PFSGRQVPPFLQVQV*LQLTPHKPSGQDRW
Trigger: CCACCTGTCCTGCCCTGAGGGCTTATGGGGAGTCAACTGTAGCAACACCTGCACCTGCAAGAATGGGGGCACCTGTCTCCCTGAGAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
ENST00000482505.1
CDS CAA 90 bp CCAGAAGGGCAAGAACATACCCCACTCTTGGGATCACACGAGCTGTaGTTGCCGCAGCTGCAGGGCTTGTCACACTGTGGCCCCCACATT +
Preference number: 6 (lower is better)
Translates to: PEGQEHTPLLGSHEL*LPQLQGLSHCGPHI
Trigger: AATGTGGGGGCCACAGTGTGACAAGCCCTGCAGCTGCGGCAACAACAGCTCGTGTGATCCCAAGAGTGGGGTATGTTCTTGCCCTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000455314.5
ENST00000469390.5
CDS TCA 72 bp GGTGCTCCTTGCCTTTTTGCCAGTGCCGATAGCCAATaGACAGTGCCACCAGGGCTACCACAAGGGACCCCA +
Preference number: 6 (lower is better)
Translates to: GAPCLFASADSQ*TVPPGLPQGTP
Trigger: TGGGGTCCCTTGTGGTAGCCCTGGTGGCACTGTTCATTGGCTATCGGCACTGGCAAAAAGGCAAGGAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp CCACCAGGGCTACCACAAGGGACCCCAGCACTGCAATaGCAATCACTGCACCCAGCGAGTTATACGCTACTG +
Preference number: 6 (lower is better)
Translates to: PPGLPQGTPALQ*QSLHPASYTLL
Trigger: CAGTAGCGTATAACTCGCTGGGTGCAGTGATTGGCATTGCAGTGCTGGGGTCCCTTGTGGTAGCCCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp CTTGCCTTTTTGCCAGTGCCGATAGCCAATGAACAGTaGCACCAGGGCTACCACAAGGGACCCCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: LAFLPVPIANEQ*HQGYHKGPQHC
Trigger: GCAGTGCTGGGGTCCCTTGTGGTAGCCCTGGTGGCACTGTTCATTGGCTATCGGCACTGGCAAAAAGGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp TGCTGTAGCTATAGCTGTAGCTTCGGTCCAGGCGGCTaGTCCCTGAGGAGGAGGAGGCAACTGGTAATCAGC +
Preference number: 6 (lower is better)
Translates to: CCSYSCSFGPGG*SLRRRRQLVIS
Trigger: GCTGATTACCAGTTGCCTCCTCCTCCTCAGGGAGCAGCCGCCTGGACCGAAGCTACAGCTATAGCTACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465101.1
CDS CCA 72 bp GCTGCAGACCAGAAGGGCAAGAACATACCCCACTCTTaGGATCACACGAGCTGTTGTTGCCGCAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: AADQKGKNIPHS*DHTSCCCRSCR
Trigger: CCTGCAGCTGCGGCAACAACAGCTCGTGTGATCCCAAGAGTGGGGTATGTTCTTGCCCTTCTGGTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000455314.5
ENST00000469390.5
CDS CCA 72 bp CTCTGGGTGGCACTTTTCTCCAGGACCACACTGGCATaGCTGGGAGCAGTTAGCACCAAATGTCCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: LWVALFSRTTLA*LGAVSTKCPQR
Trigger: CCTCTGGGGACATTTGGTGCTAACTGCTCCCAGCCATGCCAGTGTGGTCCTGGAGAAAAGTGCCACCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 72 bp TTGGGGAGCACTGCGACAGGGTGTGGTAGCTGGGGTTaGAGTAGTAGTGACTGTAGCTCGGAGGGACATCTG +
Preference number: 6 (lower is better)
Translates to: LGSTATGCGSWG*SSSDCSSEGHL
Trigger: CAGATGTCCCTCCGAGCTACAGTCACTACTACTCCAACCCCAGCTACCACACCCTGTCGCAGTGCTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CAA 72 bp GGCTGCAGACCAGAAGGGCAAGAACATACCCCACTCTaGGGATCACACGAGCTGTTGTTGCCGCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GCRPEGQEHTPL*GSHELLLPQLQ
Trigger: CTGCAGCTGCGGCAACAACAGCTCGTGTGATCCCAAGAGTGGGGTATGTTCTTGCCCTTCTGGTCTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000455314.5
ENST00000469390.5
CDS GCA 72 bp TACCACAAGGGACCCCAGCACTGCAATGCCAATCACTaGACCCAGCGAGTTATACGCTACTGGAGTGGTCGG +
Preference number: 6 (lower is better)
Translates to: YHKGPQHCNANH*TQRVIRYWSGR
Trigger: CCGACCACTCCAGTAGCGTATAACTCGCTGGGTGCAGTGATTGGCATTGCAGTGCTGGGGTCCCTTGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CAA 72 bp GTGGTGGTAGTGAAGCTTTCCCAGAAGCTGCAGGTATaGGGATCACTGGGGTTGAGAGTTCCAGCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: VVVVKLSQKLQV*GSLGLRVPASR
Trigger: GCGGCTGGCTGGAACTCTCAACCCCAGTGATCCCAATACCTGCAGCTTCTGGGAAAGCTTCACTACCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000444016.5
ENST00000455314.5
CDS CAA 72 bp CAAGAACATACCCCACTCTTGGGATCACACGAGCTGTaGTTGCCGCAGCTGCAGGGCTTGTCACACTGTGGC +
Preference number: 6 (lower is better)
Translates to: QEHTPLLGSHEL*LPQLQGLSHCG
Trigger: GCCACAGTGTGACAAGCCCTGCAGCTGCGGCAACAACAGCTCGTGTGATCCCAAGAGTGGGGTATGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000455314.5
ENST00000469390.5
CDS CAA 72 bp GTAAGCCACAGCCAGGTGGTGGTGCTCCTTGCCTTTTaGCCAGTGCCGATAGCCAATGAACAGTGCCACCAG +
Preference number: 6 (lower is better)
Translates to: VSHSQVVVLLAF*PVPIANEQCHQ
Trigger: CTGGTGGCACTGTTCATTGGCTATCGGCACTGGCAAAAAGGCAAGGAGCACCACCACCTGGCTGTGGCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS GCA 72 bp GGGTTTGGAAGACACCTCCATTTTGGCAAGAATGGGTaGTGGGGCAGAAGAAGCCAGAAGTGCCCTGGGAAC +
Preference number: 6 (lower is better)
Translates to: GFGRHLHFGKNG*WGRRSQKCPGN
Trigger: GTTCCCAGGGCACTTCTGGCTTCTTCTGCCCCAGCACCCATTCTTGCCAAAATGGAGGTGTCTTCCAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS CCA 72 bp AATGCCAATCACTGCACCCAGCGAGTTATACGCTACTaGAGTGGTCGGCATCACAGTAAAGGGCTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: NANHCTQRVIRY*SGRHHSKGLLD
Trigger: ATCCAGGAGCCCTTTACTGTGATGCCGACCACTCCAGTAGCGTATAACTCGCTGGGTGCAGTGATTGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000469390.5
CDS TCA 72 bp GGTCCGGTATACAACCCCGACACAGACCATGCAGAATaGATCCCTAGAAGCCAGGAGTTTCCTCTGAGTTTG +
Preference number: 6 (lower is better)
Translates to: GPVYNPDTDHAE*IPRSQEFPLSL
Trigger: CAAACTCAGAGGAAACTCCTGGCTTCTAGGGATTCATTCTGCATGGTCTGTGTCGGGGTTGTATACCGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444016.5
CDS CCA 72 bp CTCTTCAGAGATGAGCCCTTTATTGTAGAATGGGCCTaGGCCATTGCTGTAGCTATAGCTGTAGCTTCGGTC +
Preference number: 6 (lower is better)
Translates to: LFRDEPFIVEWA*AIAVAIAVASV
Trigger: GACCGAAGCTACAGCTATAGCTACAGCAATGGCCCAGGCCCATTCTACAATAAAGGGCTCATCTCTGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292357.8
ENST00000338302.7
ENST00000465101.1
ENST00000469390.5