RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PEAK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000173517

Ensembl transcript IDs: ENST00000312493.5, ENST00000558305.5, ENST00000559791.1, ENST00000560626.6, ENST00000560854.1, ENST00000564328.5, ENST00000565820.5, ENST00000567337.5, ENST00000567808.5, ENST00000569159.1, ENST00000569819.5, ENST00000682557.1

Found 1669 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTACACAGCTGCAGCAGGCAGGGCCTGTGTCCCTGGGGATTGTCTaGTCAGGCTTGCTGTTGACCCTTCCTCCTGGGCCCAGGCAACAC +
Preference number: 1 (lower is better)
Translates to: ATQLQQAGPVSLGIV*SGLLLTLPPGPRQH
Trigger: GTGTTGCCTGGGCCCAGGAGGAAGGGTCAACAGCAAGCCTGACCAGACAATCCCCAGGGACACAGGCCCTGCCTGCTGCAGCTGTGTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp CACTCTGCAGGCATGGAGCTGCCAAAGGCCCCATCCAACTGTCAGTaGCCCATCACCTCCGGACAACCCAGAGTCAGACAGGATGGCATC +
Preference number: 1 (lower is better)
Translates to: HSAGMELPKAPSNCQ*PITSGQPRVRQDGI
Trigger: GATGCCATCCTGTCTGACTCTGGGTTGTCCGGAGGTGATGGGCCACTGACAGTTGGATGGGGCCTTTGGCAGCTCCATGCCTGCAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp GCCTTGTTCCACCTCACCTGGAGTCTGGCTTGGGCAATCCTGAACTaGTCCCACCATCCACTGGCCTGTATCCTTTCAGGGCTCCAGGTG +
Preference number: 1 (lower is better)
Translates to: ALFHLTWSLAWAILN*SHHPLACILSGLQV
Trigger: CACCTGGAGCCCTGAAAGGATACAGGCCAGTGGATGGTGGGACCAGTTCAGGATTGCCCAAGCCAGACTCCAGGTGAGGTGGAACAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp GTCCCTGGGGATTGTCTGGTCAGGCTTGCTGTTGACCCTTCCTCCTaGGCCCAGGCAACACACAGAGAGCTTTTGGGTCCACACCAACAT +
Preference number: 1 (lower is better)
Translates to: VPGDCLVRLAVDPSS*AQATHRELLGPHQH
Trigger: ATGTTGGTGTGGACCCAAAAGCTCTCTGTGTGTTGCCTGGGCCCAGGAGGAAGGGTCAACAGCAAGCCTGACCAGACAATCCCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp TCAGGCAGAGAGGCCCCTTACAAGCTCAGAATAGCTGAAGGACCCTaGGGAGGAGGGGGTCTTGGAGTCACTGGACTTGGGTGGTCTTTC +
Preference number: 1 (lower is better)
Translates to: SGREAPYKLRIAEGP*GGGGLGVTGLGWSF
Trigger: GAAAGACCACCCAAGTCCAGTGACTCCAAGACCCCCTCCTCCCCAGGGTCCTTCAGCTATTCTGAGCTTGTAAGGGGCCTCTCTGCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp CACTTCCCATCGCAGCCCTGTCCCTTGTCAGTTTACCACTGTGCCTaGCTCTCCCCCAATAAAGGGTCCAGGTTGTGTAGGGAGGAAGGC +
Preference number: 1 (lower is better)
Translates to: HFPSQPCPLSVYHCA*LSPNKGSRLCREEG
Trigger: GCCTTCCTCCCTACACAACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGACAGGGCTGCGATGGGAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTaGCAAAGGCCCCATCCAACTGTCAGTGGCCCATCACCTCCGGAC +
Preference number: 1 (lower is better)
Translates to: SLWLRLKDNTLQAWS*QRPHPTVSGPSPPD
Trigger: GTCCGGAGGTGATGGGCCACTGACAGTTGGATGGGGCCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp AACCAAGCCTCTCAACATGCAGTACAAACCCAGGAAGCCTGCAGGTaGCTGCTCACCAGAGGGCGATCTCACACAGCAAACCTGCAGCCT +
Preference number: 1 (lower is better)
Translates to: NQASQHAVQTQEACR*LLTRGRSHTANLQP
Trigger: AGGCTGCAGGTTTGCTGTGTGAGATCGCCCTCTGGTGAGCAGTCACCTGCAGGCTTCCTGGGTTTGTACTGCATGTTGAGAGGCTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp GGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGATCTaGCTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCT +
Preference number: 1 (lower is better)
Translates to: GLTGKGAGPTGKLQI*LLSLASAFFSLTLS
Trigger: AGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAGTCAGATCTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp TGCCTTGTGTTGGCCTGGCGATCCCATAGGAGTTCAGTGAAGGTCTaGCAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGATCTGAC +
Preference number: 1 (lower is better)
Translates to: CLVLAWRSHRSSVKV*QGKVLALQGSYRSD
Trigger: GTCAGATCTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTCCTATGGGATCGCCAGGCCAACACAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 90 bp CTGACTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTaGCCACATCAGGAAGCACTCCTTGGCTACCCCAGTCTGTCACAA +
Preference number: 1 (lower is better)
Translates to: LTAQPSQRFLLTHTL*PHQEALLGYPSLSQ
Trigger: TTGTGACAGACTGGGGTAGCCAAGGAGTGCTTCCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp CTGGTTGCTTCCATGCAGCTCCCAGAGGGCAAGGGAGCCATTAGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCG +
Preference number: 1 (lower is better)
Translates to: LVASMQLPEGKGAIS*CVCVCVCVCVCVCA
Trigger: CGCACACACACACACACACACACACACACACACACACACACACCAACTAATGGCTCCCTTGCCCTCTGGGAGCTGCATGGAAGCAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp ATGTCAGCAGGGGATGAGGACCCAGAGTGCAGAAGACACACAGGCTaGAAGCCATCATTTCCTGTGTTATGGACAGGGCACCTACCCTGG +
Preference number: 1 (lower is better)
Translates to: MSAGDEDPECRRHTG*KPSFPVLWTGHLPW
Trigger: CCAGGGTAGGTGCCCTGTCCATAACACAGGAAATGATGGCTTTCAGCCTGTGTGTCTTCTGCACTCTGGGTCCTCATCCCCTGCTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp ACTGCTCACCAGAGGGCGATCTCACACAGCAAACCTGCAGCCTTCTaGGGTCTGGGAAAAGCAGAATGCCTTTGCTTTCTCTTTGGGGCC +
Preference number: 1 (lower is better)
Translates to: TAHQRAISHSKPAAF*GLGKAECLCFLFGA
Trigger: GGCCCCAAAGAGAAAGCAAAGGCATTCTGCTTTTCCCAGACCTCAGAAGGCTGCAGGTTTGCTGTGTGAGATCGCCCTCTGGTGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp GCCCATCACCTCCGGACAACCCAGAGTCAGACAGGATGGCATCACTaGGGACCACTAATGGAATTCTCAGGAATGAATCCCACGCTGGGT +
Preference number: 1 (lower is better)
Translates to: AHHLRTTQSQTGWHH*GPLMEFSGMNPTLG
Trigger: ACCCAGCGTGGGATTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTCTGGGTTGTCCGGAGGTGATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp AGTGCTAATGCCTTGTGTTGGCCTGGCGATCCCATAGGAGTTCAGTaGAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACA +
Preference number: 1 (lower is better)
Translates to: SANALCWPGDPIGVQ*RSDRERCWPYREAT
Trigger: TGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTCCTATGGGATCGCCAGGCCAACACAAGGCATTAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 90 bp CACTCACTAGGCACAGAGAACATGTCTGTCAACCCTGCCACAGGTTaGTTTTCTAGAGGCCTGGCCTCTACTTCCAGCATGCGTGTGCAC +
Preference number: 1 (lower is better)
Translates to: HSLGTENMSVNPATG*FSRGLASTSSMRVH
Trigger: GTGCACACGCATGCTGGAAGTAGAGGCCAGGCCTCTAGAAAAGCAACCTGTGGCAGGGTTGACAGACATGTTCTCTGTGCCTAGTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp GGAGGACTGTCCCTCACTCCAGGAAGCTGGGAGGTGGAGTACGGTTaGTGGATGACAAATCGTAGTTCCCTTACTAAGGATCTGGGGCAA +
Preference number: 1 (lower is better)
Translates to: GGLSLTPGSWEVEYG*WMTNRSSLTKDLGQ
Trigger: TTGCCCCAGATCCTTAGTAAGGGAACTACGATTTGTCATCCAGCAACCGTACTCCACCTCCCAGCTTCCTGGAGTGAGGGACAGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 90 bp AAAGAAGGTTGTCAGTTGCTCTGTGGCAGCTGTTGGCCACTTAGTTaGCTTTGTGGTTCCAGAAGCAGTCCTGGGAGGCCCCTCTGTAGG +
Preference number: 1 (lower is better)
Translates to: KEGCQLLCGSCWPLS*LCGSRSSPGRPLCR
Trigger: CCTACAGAGGGGCCTCCCAGGACTGCTTCTGGAACCACAAAGGCAACTAAGTGGCCAACAGCTGCCACAGAGCAACTGACAACCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp CGATGCGGGTGCAGAGAATTTCAATGCATGTCTCCCAGGCCAGCCTaGAGAGTGGAGCTGCTGCAACATCTGGTCAGCAATAAGCATGAG +
Preference number: 1 (lower is better)
Translates to: RCGCREFQCMSPRPA*RVELLQHLVSNKHE
Trigger: CTCATGCTTATTGCTGACCAGATGTTGCAGCAGCTCCACTCTCCAGGCTGGCCTGGGAGACATGCATTGAAATTCTCTGCACCCGCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 90 bp CAGAAGCCCTCACAGCATTATCACTCAGCTTTCTGGTTGCTTCCATaGAGCTCCCAGAGGGCAAGGGAGCCATTAGTTGGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: QKPSQHYHSAFWLLP*SSQRAREPLVGVCV
Trigger: CACACACACACCAACTAATGGCTCCCTTGCCCTCTGGGAGCTGCATGGAAGCAACCAGAAAGCTGAGTGATAATGCTGTGAGGGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 90 bp GAGAATTTCAATGCATGTCTCCCAGGCCAGCCTGGAGAGTGGAGCTaGTGCAACATCTGGTCAGCAATAAGCATGAGAGGTGGAGGACAC +
Preference number: 1 (lower is better)
Translates to: ENFNACLPGQPGEWS*CNIWSAISMRGGGH
Trigger: GTGTCCTCCACCTCTCATGCTTATTGCTGACCAGATGTTGCAGCAGCTCCACTCTCCAGGCTGGCCTGGGAGACATGCATTGAAATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp GTAATGGGCCACAAGTGGCTGATAAATCCAAACTTCACTGGCAAGTaGGGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACT +
Preference number: 1 (lower is better)
Translates to: VMGHKWLINPNFTGK*GQSGESGSGSRGET
Trigger: AGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCCCCACTTGCCAGTGAAGTTTGGATTTATCAGCCACTTGTGGCCCATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 90 bp CACGGACAGCTGGACTTCAGTGCGCACTTCAGCAAGAGCAGCACTTaGATTTGTCTCGGCACAGCACTTTGGGCCTTTGAGAATATGAGC +
Preference number: 1 (lower is better)
Translates to: HGQLDFSAHFSKSST*ICLGTALWAFENMS
Trigger: GCTCATATTCTCAAAGGCCCAAAGTGCTGTGCCGAGACAAATCCAAGTGCTGCTCTTGCTGAAGTGCGCACTGAAGTCCAGCTGTCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 90 bp GTCCATGGAATCCCCACTTTTGGCACTGCTGTAAGCACGGACAGCTaGACTTCAGTGCGCACTTCAGCAAGAGCAGCACTTGGATTTGTC +
Preference number: 1 (lower is better)
Translates to: VHGIPTFGTAVSTDS*TSVRTSARAALGFV
Trigger: GACAAATCCAAGTGCTGCTCTTGCTGAAGTGCGCACTGAAGTCCAGCTGTCCGTGCTTACAGCAGTGCCAAAAGTGGGGATTCCATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 90 bp GTCAGTACTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTaGCCTGGCACACACGGTGACCACTCAGGCCAGCAGAGCTTCACA +
Preference number: 1 (lower is better)
Translates to: VSTESVVMESCISET*PGTHGDHSGQQSFT
Trigger: TGTGAAGCTCTGCTGGCCTGAGTGGTCACCGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAGTACTGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp CAAGATTCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATaGAGCTGCCAAAGGCCCCATCCAACTGTCAGTGGCCCATCACCT +
Preference number: 1 (lower is better)
Translates to: QDSLWLRLKDNTLQA*SCQRPHPTVSGPSP
Trigger: AGGTGATGGGCCACTGACAGTTGGATGGGGCCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGAATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp GGACTGTCCCTCACTCCAGGAAGCTGGGAGGTGGAGTACGGTTGCTaGATGACAAATCGTAGTTCCCTTACTAAGGATCTGGGGCAAACA +
Preference number: 1 (lower is better)
Translates to: GLSLTPGSWEVEYGC*MTNRSSLTKDLGQT
Trigger: TGTTTGCCCCAGATCCTTAGTAAGGGAACTACGATTTGTCATCCAGCAACCGTACTCCACCTCCCAGCTTCCTGGAGTGAGGGACAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp GGTGCAGAGAATTTCAATGCATGTCTCCCAGGCCAGCCTGGAGAGTaGAGCTGCTGCAACATCTGGTCAGCAATAAGCATGAGAGGTGGA +
Preference number: 1 (lower is better)
Translates to: GAENFNACLPGQPGE*SCCNIWSAISMRGG
Trigger: TCCACCTCTCATGCTTATTGCTGACCAGATGTTGCAGCAGCTCCACTCTCCAGGCTGGCCTGGGAGACATGCATTGAAATTCTCTGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp ACTGCACAGTCAGTCTTGGCTTTAAGGAAACTCTGCACTGGTAGATaGGGGGCCTCAGGGCTCACTCACTCACTAGGCACAGAGAACATG +
Preference number: 1 (lower is better)
Translates to: TAQSVLALRKLCTGR*GASGLTHSLGTENM
Trigger: CATGTTCTCTGTGCCTAGTGAGTGAGTGAGCCCTGAGGCCCCTCATCTACCAGTGCAGAGTTTCCTTAAAGCCAAGACTGACTGTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 90 bp AGGCCCCTGTGTATCACTGTGTCAAAGGCATGCGAATCTTGCAGATaGTGCAGTACCAGGCCCTGTCCCCGCTCATATTACCTGAATAGC +
Preference number: 1 (lower is better)
Translates to: RPLCITVSKACESCR*CSTRPCPRSYYLNS
Trigger: GCTATTCAGGTAATATGAGCGGGGACAGGGCCTGGTACTGCATCATCTGCAAGATTCGCATGCCTTTGACACAGTGATACACAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp TGTCCCTCACTCCAGGAAGCTGGGAGGTGGAGTACGGTTGCTGGATaGCAAATCGTAGTTCCCTTACTAAGGATCTGGGGCAAACAAACC +
Preference number: 1 (lower is better)
Translates to: CPSLQEAGRWSTVAG*QIVVPLLRIWGKQT
Trigger: GGTTTGTTTGCCCCAGATCCTTAGTAAGGGAACTACGATTTGTCATCCAGCAACCGTACTCCACCTCCCAGCTTCCTGGAGTGAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp AGGAAGGCAGGCTTGGATTCAGAGGCATGGACCCATTTCTGCCTCTaGTGTGCTATGTCACCATCGGCAGGTAGGAGGTGTTCAGAGAAA +
Preference number: 1 (lower is better)
Translates to: RKAGLDSEAWTHFCL*CAMSPSAGRRCSEK
Trigger: TTTCTCTGAACACCTCCTACCTGCCGATGGTGACATAGCACATCAGAGGCAGAAATGGGTCCATGCCTCTGAATCCAAGCCTGCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 90 bp ACACAACCCCAGTGGAAGGAACGCTCATCTCTTAGCGCAAATATGTaGCAAGGGAAGAAGGGGGAGGGTTTCTGTAGACTCGCTTCAGGT +
Preference number: 1 (lower is better)
Translates to: TQPQWKERSSLSANM*QGKKGEGFCRLASG
Trigger: ACCTGAAGCGAGTCTACAGAAACCCTCCCCCTTCTTCCCTTGGCACATATTTGCGCTAAGAGATGAGCGTTCCTTCCACTGGGGTTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp AATTTCAATGCATGTCTCCCAGGCCAGCCTGGAGAGTGGAGCTGCTaGAACATCTGGTCAGCAATAAGCATGAGAGGTGGAGGACACAGA +
Preference number: 1 (lower is better)
Translates to: NFNACLPGQPGEWSC*NIWSAISMRGGGHR
Trigger: TCTGTGTCCTCCACCTCTCATGCTTATTGCTGACCAGATGTTGCAGCAGCTCCACTCTCCAGGCTGGCCTGGGAGACATGCATTGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp GCATTGGTGACACCACCTTGGGTCAGCTCTGTAATGGGCCACAAGTaGCTGATAAATCCAAACTTCACTGGCAAGTGGGGACAGAGTGGA +
Preference number: 1 (lower is better)
Translates to: ALVTPPWVSSVMGHK*LINPNFTGKWGQSG
Trigger: TCCACTCTGTCCCCACTTGCCAGTGAAGTTTGGATTTATCAGCCACTTGTGGCCCATTACAGAGCTGACCCAAGGTGGTGTCACCAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 90 bp CTTTCTTCTCACTCACACTCTCTGCCCACATCAGGAAGCACTCCTTaGCTACCCCAGTCTGTCACAATTGGAGCAAACACCCATAGGCCT +
Preference number: 1 (lower is better)
Translates to: LSSHSHSLPTSGSTP*LPQSVTIGANTHRP
Trigger: AGGCCTATGGGTGTTTGCTCCAATTGTGACAGACTGGGGTAGCCAAGGAGTGCTTCCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp GCAAGAAAATCATCTCCTCATGCCCTGCCAGCTATTTATAAGCTCTaGACTGCACTCCACCCTGCTGAGGCATTGGTGACACCACCTTGG +
Preference number: 1 (lower is better)
Translates to: ARKSSPHALPAIYKL*TALHPAEALVTPPW
Trigger: CCAAGGTGGTGTCACCAATGCCTCAGCAGGGTGGAGTGCAGTTCAGAGCTTATAAATAGCTGGCAGGGCATGAGGAGATGATTTTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 90 bp TTCACTCCGGGCAGGAAAGAAATCAAGATTCTCTGTGGCTTAGGTTaGAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGCCCCATC +
Preference number: 1 (lower is better)
Translates to: FTPGRKEIKILCGLG*KTTLCRHGAAKGPI
Trigger: GATGGGGCCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGAATCTTGATTTCTTTCCTGCCCGGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp GATTTTTCTTCTTTGGACACCAAGAAGCCACTGATGATACTGGGGTaGCAGCTAGAGAGTGAGGGAGGACTGTCCCTCACTCCAGGAAGC +
Preference number: 1 (lower is better)
Translates to: DFSSLDTKKPLMILG*QLESEGGLSLTPGS
Trigger: GCTTCCTGGAGTGAGGGACAGTCCTCCCTCACTCTCTAGCTGTCACCCCAGTATCATCAGTGGCTTCTTGGTGTCCAAAGAAGAAAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp TGTAGGGAAGATGGAGAGCAAACAGGCAAGTCTGCTCAGGGGCCTTaGGAGGAAATGTCTCAAAGACGGCCAGTGCTAATGCCTTGTGTT +
Preference number: 1 (lower is better)
Translates to: CREDGEQTGKSAQGP*EEMSQRRPVLMPCV
Trigger: AACACAAGGCATTAGCACTGGCCGTCTTTGAGACATTTCCTCTCAAGGCCCCTGAGCAGACTTGCCTGTTTGCTCTCCATCTTCCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp AAAGAGTTCCTGGAGCAGAAGGTACACACTTACAACCCCAGGCAATaGAGAGCTCCCCACACCAATTCACTCCGGGCAGGAAAGAAATCA +
Preference number: 1 (lower is better)
Translates to: KEFLEQKVHTYNPRQ*RAPHTNSLRAGKKS
Trigger: TGATTTCTTTCCTGCCCGGAGTGAATTGGTGTGGGGAGCTCTCCATTGCCTGGGGTTGTAAGTGTGTACCTTCTGCTCCAGGAACTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp AGGAAGCATAATTTGCTAGGCCTTGGAGAGGAGGCAAAGAGTTCCTaGAGCAGAAGGTACACACTTACAACCCCAGGCAATGGAGAGCTC +
Preference number: 1 (lower is better)
Translates to: RKHNLLGLGEEAKSS*SRRYTLTTPGNGEL
Trigger: GAGCTCTCCATTGCCTGGGGTTGTAAGTGTGTACCTTCTGCTCCAGGAACTCTTTGCCTCCTCTCCAAGGCCTAGCAAATTATGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp TTGCAGATTCCTCAGAAGCCCTCACAGCATTATCACTCAGCTTTCTaGTTGCTTCCATGCAGCTCCCAGAGGGCAAGGGAGCCATTAGTT +
Preference number: 1 (lower is better)
Translates to: LQIPQKPSQHYHSAF*LLPCSSQRAREPLV
Trigger: AACTAATGGCTCCCTTGCCCTCTGGGAGCTGCATGGAAGCAACCAGAAAGCTGAGTGATAATGCTGTGAGGGCTTCTGAGGAATCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp TCTGTCACAATTGGAGCAAACACCCATAGGCCTGGGCCTATCCGCTaGCACAAAAACAAGCCAATAGACAAAGACTCGTATGGTGGTGGG +
Preference number: 1 (lower is better)
Translates to: SVTIGANTHRPGPIR*HKNKPIDKDSYGGG
Trigger: CCCACCACCATACGAGTCTTTGTCTATTGGCTTGTTTTTGTGCCAGCGGATAGGCCCAGGCCTATGGGTGTTTGCTCCAATTGTGACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp AAAACCAAGGCTCAGAGAATGGCTGAGGACACAGTTTGTCAGAGGTaGAACCTGGAGCTAAATCCAGATTCAGGCAGAGAGGCCCCTTAC +
Preference number: 1 (lower is better)
Translates to: KTKAQRMAEDTVCQR*NLELNPDSGREAPY
Trigger: GTAAGGGGCCTCTCTGCCTGAATCTGGATTTAGCTCCAGGTTCCACCTCTGACAAACTGTGTCCTCAGCCATTCTCTGAGCCTTGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp CCGCTGGCACAAAAACAAGCCAATAGACAAAGACTCGTATGGTGGTaGGGAGAACTGGCTTCAAGCCTAGGTTTGAATCTCAGCTCTACC +
Preference number: 1 (lower is better)
Translates to: PLAQKQANRQRLVWW*GELASSLGLNLSST
Trigger: GGTAGAGCTGAGATTCAAACCTAGGCTTGAAGCCAGTTCTCCCCACCACCATACGAGTCTTTGTCTATTGGCTTGTTTTTGTGCCAGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp AGACAAAAAGGAAAAGAAGGTTGTCAGTTGCTCTGTGGCAGCTGTTaGCCACTTAGTTGCCTTTGTGGTTCCAGAAGCAGTCCTGGGAGG +
Preference number: 1 (lower is better)
Translates to: RQKGKEGCQLLCGSC*PLSCLCGSRSSPGR
Trigger: CCTCCCAGGACTGCTTCTGGAACCACAAAGGCAACTAAGTGGCCAACAGCTGCCACAGAGCAACTGACAACCTTCTTTTCCTTTTTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp TGCATAATCAGGCAAGGAGTTATGTGCACATGTTCTATGCTAAGATaGACCAAACACCAACCTTCAAGGCAAGGCGCGGCCATGCCACAG +
Preference number: 1 (lower is better)
Translates to: CIIRQGVMCTCSMLR*TKHQPSRQGAAMPQ
Trigger: CTGTGGCATGGCCGCGCCTTGCCTTGAAGGTTGGTGTTTGGTTCATCTTAGCATAGAACATGTGCACATAACTCCTTGCCTGATTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 90 bp TGCTTGTGCCCTCACCTCAACCCATACCTCACCCAGTTCATCTTCTaGGGGCAAATCTTGAAACTCATTGCCATATTCCTGGCTTCCAGT +
Preference number: 1 (lower is better)
Translates to: CLCPHLNPYLTQFIF*GQILKLIAIFLASS
Trigger: ACTGGAAGCCAGGAATATGGCAATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGGTGAGGGCACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 90 bp GAGCCATTTTACAGAGTCAGAAGGAGCAATGAGCCACTTAAACACTaGGAGGCAGTCTCTCTAGAAGAGGTCAACCTTCTGAGGAGGTCA +
Preference number: 1 (lower is better)
Translates to: EPFYRVRRSNEPLKH*EAVSLEEVNLLRRS
Trigger: TGACCTCCTCAGAAGGTTGACCTCTTCTAGAGAGACTGCCTCCCAGTGTTTAAGTGGCTCATTGCTCCTTCTGACTCTGTAAAATGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp AATGTGCTGGCTGACATGGTCAGTGGTCTGTGTGCTGCCCTTCAGTaGATAATCAGGCAAGGAGTTATGTGCACATGTTCTATGCTAAGA +
Preference number: 1 (lower is better)
Translates to: NVLADMVSGLCAALQ*IIRQGVMCTCSMLR
Trigger: TCTTAGCATAGAACATGTGCACATAACTCCTTGCCTGATTATGCACTGAAGGGCAGCACACAGACCACTGACCATGTCAGCCAGCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 90 bp CATGACATTGAGAAGGTATATCTCAATATGCAAGACATTGCAAGATaGGAGGTGGGGGAGGTTAAGGGAATGTGCTGGCTGACATGGTCA +
Preference number: 1 (lower is better)
Translates to: HDIEKVYLNMQDIAR*EVGEVKGMCWLTWS
Trigger: TGACCATGTCAGCCAGCACATTCCCTTAACCTCCCCCACCTCCCATCTTGCAATGTCTTGCATATTGAGATATACCTTCTCAATGTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 90 bp TGGGCCTTTGAGAATATGAGCTTCGATGACATAAAGCTAATAACTTaGTTTTGTGGGCAGCCATCCTGTTCACTCATTAGGCTGGAGCGG +
Preference number: 1 (lower is better)
Translates to: WAFENMSFDDIKLIT*FCGQPSCSLIRLER
Trigger: CCGCTCCAGCCTAATGAGTGAACAGGATGGCTGCCCACAAAACCAAGTTATTAGCTTTATGTCATCGAAGCTCATATTCTCAAAGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 90 bp TTTCTTTGGTATAATCTCTCCCAGGATCTTGCACTGCAACTCTTCTaGCTTCCCTTATGGCACCGTTTTTGGTCCATGGAATCCCCACTT +
Preference number: 1 (lower is better)
Translates to: FLWYNLSQDLALQLF*LPLWHRFWSMESPL
Trigger: AAGTGGGGATTCCATGGACCAAAAACGGTGCCATAAGGGAAGCCAGAAGAGTTGCAGTGCAAGATCCTGGGAGAGATTATACCAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 90 bp CAGCCCACCTCACTGTGCCCTCTAAAGGAGATCTTAGAGCTCCACTaGCAGCTATTTCATTCAGGGCAATTGTTTACAGCATTTGGTAAA +
Preference number: 1 (lower is better)
Translates to: QPTSLCPLKEILELH*QLFHSGQLFTAFGK
Trigger: TTTACCAAATGCTGTAAACAATTGCCCTGAATGAAATAGCTGTCAGTGGAGCTCTAAGATCTCCTTTAGAGGGCACAGTGAGGTGGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 90 bp TTGCCATATTCCTGGCTTCCAGTTCTAGCTCAGCCTAGGGGTTGGTaGTTCTTACGTTGTTGTTCCACAGGTTACAGTGACTCTTTTTCT +
Preference number: 1 (lower is better)
Translates to: LPYSWLPVLAQPRGW*FLRCCSTGYSDSFS
Trigger: AGAAAAAGAGTCACTGTAACCTGTGGAACAACAACGTAAGAATCACCAACCCCTAGGCTGAGCTAGAACTGGAAGCCAGGAATATGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp AAAAGGCTTGATTTCTTTGGTATAATCTCTCCCAGGATCTTGCACTaGAACTCTTCTGGCTTCCCTTATGGCACCGTTTTTGGTCCATGG +
Preference number: 1 (lower is better)
Translates to: KRLDFFGIISPRILH*NSSGFPYGTVFGPW
Trigger: CCATGGACCAAAAACGGTGCCATAAGGGAAGCCAGAAGAGTTGCAGTGCAAGATCCTGGGAGAGATTATACCAAAGAAATCAAGCCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp GGAGTACACAGCAAAGTACCACAGCAAACCAAAGGGTGGCACCACTaGTGGCAGAGAGGACCTTTCAATGATAGATTTATACAACTTTAC +
Preference number: 1 (lower is better)
Translates to: GVHSKVPQQTKGWHH*WQRGPFNDRFIQLY
Trigger: GTAAAGTTGTATAAATCTATCATTGAAAGGTCCTCTCTGCCAGCAGTGGTGCCACCCTTTGGTTTGCTGTGGTACTTTGCTGTGTACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp AGAGAGTGGAACCCTACAGCTATATGCGTATGTCTTGTATATATTTaGTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTG +
Preference number: 1 (lower is better)
Translates to: REWNPTAICVCLVYI*SSMELLGVEDFTTL
Trigger: CAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCTGTAGGGTTCCACTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 90 bp CACTTCAGCAAGAGCAGCACTTGGATTTGTCTCGGCACAGCACTTTaGGCCTTTGAGAATATGAGCTTCGATGACATAAAGCTAATAACT +
Preference number: 1 (lower is better)
Translates to: HFSKSSTWICLGTAL*AFENMSFDDIKLIT
Trigger: AGTTATTAGCTTTATGTCATCGAAGCTCATATTCTCAAAGGCCCAAAGTGCTGTGCCGAGACAAATCCAAGTGCTGCTCTTGCTGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 90 bp ATGCAGTGCACATACTTACAGATAATGGCAATGAAAATGGGTCTATaGCCCAAGGATGGGATCTCTCCTTTTCTTTCTACTCTCTCCTGG +
Preference number: 1 (lower is better)
Translates to: MQCTYLQIMAMKMGL*PKDGISPFLSTLSW
Trigger: CCAGGAGAGAGTAGAAAGAAAAGGAGAGATCCCATCCTTGGGTCATAGACCCATTTTCATTGCCATTATCTGTAAGTATGTGCACTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp ACTGAATTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTaGTATACATTCAGTCTTGCTCTTGGCTACTTTAGCCACTGTTGT +
Preference number: 1 (lower is better)
Translates to: TELLPRLGYHSNKAL*YTFSLALGYFSHCC
Trigger: ACAACAGTGGCTAAAGTAGCCAAGAGCAAGACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAATTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 90 bp AAAGGAAGAGTCTGTTGTCAGAGTCTACTGGGTCGTGGTAGAGACTaGTTAAGTCTGTCTACTGCTAGTGAGAATAAATACTTGGTGCTA +
Preference number: 1 (lower is better)
Translates to: KGRVCCQSLLGRGRD*LSLSTASENKYLVL
Trigger: TAGCACCAAGTATTTATTCTCACTAGCAGTAGACAGACTTAACCAGTCTCTACCACGACCCAGTAGACTCTGACAACAGACTCTTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 90 bp GTACACAGCAAAGTACCACAGCAAACCAAAGGGTGGCACCACTGCTaGCAGAGAGGACCTTTCAATGATAGATTTATACAACTTTACAAT +
Preference number: 1 (lower is better)
Translates to: VHSKVPQQTKGWHHC*QRGPFNDRFIQLYN
Trigger: ATTGTAAAGTTGTATAAATCTATCATTGAAAGGTCCTCTCTGCCAGCAGTGGTGCCACCCTTTGGTTTGCTGTGGTACTTTGCTGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp CCAAGTAGAATGAAATCTTGCTTCTGTATTTGCCTCATGCCAAAATaGCCTGCATATCCTCAACAGAAAATCCCAACCCAGTGTGTTCAT +
Preference number: 1 (lower is better)
Translates to: PSRMKSCFCICLMPK*PAYPQQKIPTQCVH
Trigger: ATGAACACACTGGGTTGGGATTTTCTGTTGAGGATATGCAGGGCATTTTGGCATGAGGCAAATACAGAAGCAAGATTTCATTCTACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 90 bp TTAATATTTAATTTAATCACTCAGTCAGTACTGAATCAGTTGTTATaGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGGTGACC +
Preference number: 1 (lower is better)
Translates to: LIFNLITQSVLNQLL*SPALVRPGLAHTVT
Trigger: GGTCACCGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAGTACTGACTGAGTGATTAAATTAAATATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 90 bp CTTTCAAAAATGAACCCTATGTCTGGTTCAACATTCAAGTTATCATaGGTGCGGACACACACATACTATCCACACACTAACGGGCAAAGT +
Preference number: 1 (lower is better)
Translates to: LSKMNPMSGSTFKLS*VRTHTYYPHTNGQS
Trigger: ACTTTGCCCGTTAGTGTGTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACATAGGGTTCATTTTTGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp CACTGTTGTGTTTCTCTAGCACCCAAGTGTCACAGAGATTGTTCATaGTCATGTGGCTTAAGGAAAAGTTCCAATAGGAGCTTAATTGTT +
Preference number: 1 (lower is better)
Translates to: HCCVSLAPKCHRDCS*SCGLRKSSNRSLIV
Trigger: AACAATTAAGCTCCTATTGGAACTTTTCCTTAAGCCACATGAGCATGAACAATCTCTGTGACACTTGGGTGCTAGAGAAACACAACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp ATGGATTTGCTTTTCTATGCTAAAGTTCCTCTGCATTCACCAGAATaGAGTAGGCTACTTAAGCCAAAGATCCAGGGCTATAAACCTTGT +
Preference number: 1 (lower is better)
Translates to: MDLLFYAKVPLHSPE*SRLLKPKIQGYKPC
Trigger: ACAAGGTTTATAGCCCTGGATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCATAGAAAAGCAAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
3UTR GCA 90 bp GCTATTAAGGTGTTATGGATTTGCTTTTCTATGCTAAAGTTCCTCTaGATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCCAGG +
Preference number: 1 (lower is better)
Translates to: AIKVLWICFSMLKFL*IHQNAVGYLSQRSR
Trigger: CCTGGATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCATAGAAAAGCAAATCCATAACACCTTAATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
3UTR TCA 90 bp AGAGATTGGAATGAGGACTGTCATGATTCAAATCACCAAGTAGAATaGAATCTTGCTTCTGTATTTGCCTCATGCCAAAATGCCCTGCAT +
Preference number: 1 (lower is better)
Translates to: RDWNEDCHDSNHQVE*NLASVFASCQNALH
Trigger: ATGCAGGGCATTTTGGCATGAGGCAAATACAGAAGCAAGATTTCATTCTACTTGGTGATTTGAATCATGACAGTCCTCATTCCAATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 90 bp ATTTGGAGCAAGTTCCTGAAACAGTGTGGTTTAACCTTTCAAAAATaGACCCTATGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGA +
Preference number: 1 (lower is better)
Translates to: IWSKFLKQCGLTFQK*TLCLVQHSSYHECG
Trigger: TCCGCACTCATGATAACTTGAATGTTGAACCAGACATAGGGTTCATTTTTGAAAGGTTAAACCACACTGTTTCAGGAACTTGCTCCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp ATTTATGGGACTATTAGGATAGAAGGTGTTTCAAGGGAAGGCAACTaGAAGTTTGTGCAGCTGAATTTCTGTAAAGTTAAGACAGACTCA +
Preference number: 1 (lower is better)
Translates to: IYGTIRIEGVSREGN*KFVQLNFCKVKTDS
Trigger: TGAGTCTGTCTTAACTTTACAGAAATTCAGCTGCACAAACTTGCAGTTGCCTTCCCTTGAAACACCTTCTATCCTAATAGTCCCATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp ACAGTACTAAAAACATCTGATATGAAGAGGTGCTTGGTTTACCAGTaGTGTAAGATAATGGTAGTGGAGGTGTCCATGCTTATTATACCA +
Preference number: 1 (lower is better)
Translates to: TVLKTSDMKRCLVYQ*CKIMVVEVSMLIIP
Trigger: TGGTATAATAAGCATGGACACCTCCACTACCATTATCTTACAGCACTGGTAAACCAAGCACCTCTTCATATCAGATGTTTTTAGTACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 90 bp GAGTCCTTGGTTATAAAAACAGAAAGTAAATACCCACTCAGAGTTTaGCTTTTTGATCAACAATATTTGAGCACTTACTATTGCCTGGCA +
Preference number: 1 (lower is better)
Translates to: ESLVIKTESKYPLRV*LFDQQYLSTYYCLA
Trigger: TGCCAGGCAATAGTAAGTGCTCAAATATTGTTGATCAAAAAGGCAAACTCTGAGTGGGTATTTACTTTCTGTTTTTATAACCAAGGACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 90 bp CTGCAGCAGGCAGGGCCTGTGTCCCTGGGGATTGTCTGGTCAGGCTaGCTGTTGACCCTTCCTCCTGGGCCCAGGCAACACACAGAGAGC +
Preference number: 2 (lower is better)
Translates to: LQQAGPVSLGIVWSG*LLTLPPGPRQHTES
Trigger: GCTCTCTGTGTGTTGCCTGGGCCCAGGAGGAAGGGTCAACAGCAAGCCTGACCAGACAATCCCCAGGGACACAGGCCCTGCCTGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 90 bp CAGGCAGGGCCTGTGTCCCTGGGGATTGTCTGGTCAGGCTTGCTGTaGACCCTTCCTCCTGGGCCCAGGCAACACACAGAGAGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: QAGPVSLGIVWSGLL*TLPPGPRQHTESFW
Trigger: CCAAAAGCTCTCTGTGTGTTGCCTGGGCCCAGGAGGAAGGGTCAACAGCAAGCCTGACCAGACAATCCCCAGGGACACAGGCCCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTGCACTCCACCCTGCTaGGGCATTGGTGACACCACC +
Preference number: 2 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRCTPPC*GIGDTT
Trigger: GGTGGTGTCACCAATGCCTCAGCAGGGTGGAGTGCA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTGCACTCCACCCTGCTaGGGCATTGGTGACACCACC +
Preference number: 2 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRCTPPC*GIGDTT
Trigger: GGTGGTGTCACCAATGCCTCAGCAGGGTGGAGTGCA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTACTCCTGACCTCAGGTaGTCTGCCCACCTCGCCCTC +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGTPDLR*SAHLAL
Trigger: GAGGGCGAGGTGGGCAGATCACCTGAGGTCAGGAGT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTACTGGGGTCAGCCCTTaGCCAACACCCCAGGACAGG +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGTGVSP*PTPQDR
Trigger: CCTGTCCTGGGGTGTTGGGCAAGGGCTGACCCCAGT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTGGGCAATCCTGAACTaGTCCCACCATCCACTGGCC +
Preference number: 2 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRWAILN*SHHPLA
Trigger: GGCCAGTGGATGGTGGGACCAGTTCAGGATTGCCCA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTCTGCTGAGGCATTGGTaGCACCACCTTGGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: CILSGLQVFLDQTGGQAALLRHW*HHLGSA
Trigger: AGCTGACCCAAGGTGGTGTCACCAATGCCTCAGCAG...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTACTAGGGAGGGGAAGTaGATGGGTGACATGAAGAAG +
Preference number: 2 (lower is better)
Translates to: PLRPAELHTAARSWYALFTREGK*MGDMKK
Trigger: CTTCTTCATGTCACCCATGCACTTCCCCTCCCTAGT...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTAGCAGGCTACACAGCTaGAGCAGGCAGGGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGSRLHS*SRQGLC
Trigger: ACACAGGCCCTGCCTGCTGCAGCTGTGTAGCCTGCT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGTCACCCAGGCTGCAGTaGAGTGGAGCAATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQSPRLQ*SGAISA
Trigger: AGCCGAGATTGCTCCACTGCACTGCAGCCTGGGTGA...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGTTGTCAGAGTCTACTaGGTCGTGGTAGAGACTGGT +
Preference number: 2 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSVVRVY*VVVETG
Trigger: ACCAGTCTCTACCACGACCCAGTAGACTCTGACAAC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTGGAGAATCAGGCAGTaGCAGCAGAGGGGAGACTAT +
Preference number: 2 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRWRIRQ*QQRGDY
Trigger: ATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTTGGTGACACCACCTTaGGTCAGCTCTGTAATGGGC +
Preference number: 2 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRLVTPP*VSSVMG
Trigger: GCCCATTACAGAGCTGACCCAAGGTGGTGTCACCAA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGGAGCAGCTAAAGCCATaGCCTCCCTGGAGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQEQLKP*PPWRSS
Trigger: TGAGCTCCTCCAGGGAGGCCATGGCTTTAGCTGCTC...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 90 bp AGCCAGGAGGCCTCCTCTGCGCTGCTGAAGTGTCCACACATTAGCTaGTCTGCCTTTGTGAGGCCCCTGTGTATCACTGTGTCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: SQEASSALLKCPHIS*SAFVRPLCITVSKA
Trigger: TGCCTTTGACACAGTGATACACAGGGGCCTCACAAAGGCAGACAAGCTAATGTGTGGACACTTCAGCAGCGCAGAGGAGGCCTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 90 bp TGCCCACATCAGGAAGCACTCCTTGGCTACCCCAGTCTGTCACAATaGGAGCAAACACCCATAGGCCTGGGCCTATCCGCTGGCACAAAA +
Preference number: 2 (lower is better)
Translates to: CPHQEALLGYPSLSQ*EQTPIGLGLSAGTK
Trigger: TTTTGTGCCAGCGGATAGGCCCAGGCCTATGGGTGTTTGCTCCAATTGTGACAGACTGGGGTAGCCAAGGAGTGCTTCCTGATGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCACACAGCTCACTGGCTaGGTTCATACCAAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSTQLTG*VHTKEA
Trigger: AGCTTCTTTGGTATGAACTCAGCCAGTGAGCTGTGT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGCTATTTATAAGCTCTaGACTGCACTCCACCCTGCT +
Preference number: 2 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSAIYKL*TALHPA
Trigger: AGCAGGGTGGAGTGCAGTTCAGAGCTTATAAATAGC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGAGGCTGCACACATGGTaGACAGCTCTCAATCACCCA +
Preference number: 2 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRRLHTW*TALNHP
Trigger: TGGGTGATTGAGAGCTGTTCACCATGTGTGCAGCCT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTGCTTGTCTGCCTTTGTaGGGCCCCTGTGTATCACTG +
Preference number: 2 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAACLPL*GPCVSL
Trigger: CAGTGATACACAGGGGCCTCACAAAGGCAGACAAGC...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCCTCCTCTGCGCTGCTaGAGTGTCCACACATTAGCT +
Preference number: 2 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQPPLRC*SVHTLA
Trigger: AGCTAATGTGTGGACACTTCAGCAGCGCAGAGGAGG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATGGCCTGCAGCAGCATaGCCACTCCATGGCCATTCC +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIWPAAA*PLHGHS
Trigger: GGAATGGCCATGGAGTGGGCATGCTGCTGCAGGCCA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCAAATCCAAACTTCACTaGCAAGTGGGGACAGAGTGG +
Preference number: 2 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSKSKLH*QVGTEW
Trigger: CCACTCTGTCCCCACTTGCCAGTGAAGTTTGGATTT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGGTAAGCACGGACAGCTaGACTTCAGTGCGCACTTCA +
Preference number: 2 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRVSTDS*TSVRTS
Trigger: TGAAGTGCGCACTGAAGTCCAGCTGTCCGTGCTTAC...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGCAGACTCCTTCACCCTaGAAGAGGAGCATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRQTPSP*KRSISA
Trigger: AGCTGAGATGCTCCTCTTCCAGGGTGAAGGAGTCTG...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGAGACTCGTATGGTGGTaGGGAGAACTGGCTTCAAGC +
Preference number: 2 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRRLVWW*GELASS
Trigger: GCTTGAAGCCAGTTCTCCCCACCACCATACGAGTCT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCACCATGCTGACTACTaGGGTCAGCCCTTGCCCAAC +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGHHADY*GQPLPN
Trigger: GTTGGGCAAGGGCTGACCCCAGTAGTCAGCATGGTG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTATGAAAATGGGTCTATaGCCCAAGGATGGGATCTCT +
Preference number: 2 (lower is better)
Translates to: PLRPAELHTAARSWYALFMKMGL*PKDGIS
Trigger: AGAGATCCCATCCTTGGGTCATAGACCCATTTTCAT...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACTGCTGAGGCATTGGTaGCACCACCTTGGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFILLRHW*HHLGSA
Trigger: AGCTGACCCAAGGTGGTGTCACCAATGCCTCAGCAG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCATCTTAGAGCTCCACTaGCAGCTATTTCATTCAGGG +
Preference number: 2 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSILELH*QLFHSG
Trigger: CCCTGAATGAAATAGCTGTCAGTGGAGCTCTAAGAT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCACTAGGGAGGGGAAGTaGATGGGTGACATGAAGAAG +
Preference number: 2 (lower is better)
Translates to: GQSGESGSGSRGETIRAVTREGK*MGDMKK
Trigger: CTTCTTCATGTCACCCATGCACTTCCCCTCCCTAGT...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTTCAAGGGAAGGCAACTaGAAGTTTGTGCAGCTGAAT +
Preference number: 2 (lower is better)
Translates to: PLRPAELHTAARSWYALFSREGN*KFVQLN
Trigger: ATTCAGCTGCACAAACTTGCAGTTGCCTTCCCTTGA...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGACACCAAGAGCAGACTaGTGGCCTGCAGCAGCATGC +
Preference number: 2 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRTPRAD*WPAAAC
Trigger: GCATGCTGCTGCAGGCCAGCAGTCTGCTCTTGGTGT...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATCTCCCAGGCTGGAGTaGGATGGCGTGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFISPRLE*DGVILA
Trigger: AGCCAAGATCACGCCATCGCACTCCAGCCTGGGAGA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCCTGGAGAGTGGAGCTaGTGCAACATCTGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGPGEWS*CNIWSA
Trigger: TGCTGACCAGATGTTGCAGCAGCTCCACTCTCCAGG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTGCAGAGAATTTCAATaGATGTCTCCCAGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRCREFQ*MSPRPA
Trigger: GGCTGGCCTGGGAGACATGCATTGAAATTCTCTGCA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCCTGGTAACCAAAACTaGGCTGATGCTAAGGATGGC +
Preference number: 2 (lower is better)
Translates to: GQSGESGSGSRGETIRAVPGNQN*ADAKDG
Trigger: GCCATCCTTAGCATCAGCCCAGTTTTGGTTACCAGG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGCAGAGCCCTGCACTCTaGCTAGAGGAGGCAAGACTC +
Preference number: 2 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTQSPAL*LEEARL
Trigger: GAGTCTTGCCTCCTCTAGCCAGAGTGCAGGGCTCTG...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTGGCCCCTAGAGAATTaGACATGCAAGAAAATCATC +
Preference number: 2 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSWPLEN*TCKKII
Trigger: GATGATTTTCTTGCATGTGCAATTCTCTAGGGGCCA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGGCAAGGCGCGGCCATaGCACAGGACACCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: PQPIPHPVHLLRANLETHGKARP*HRTPRA
Trigger: TGCTCTTGGTGTCCTGTGGCATGGCCGCGCCTTGCC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCTGATAGAAGGGAGCTaGCCAATTACTGCTCGGGGA +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGLIEGS*PITARG
Trigger: TCCCCGAGCAGTAATTGGCCAGCTCCCTTCTATCAG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCACACACAACCCCAGTaGAAGGAACGCTCATCTCTT +
Preference number: 2 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQHTQPQ*KERSSL
Trigger: AAGAGATGAGCGTTCCTTCCACTGGGGTTGTGTGTG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTTCTGGCTTCCCTTATaGCACCGTTTTTGGTCCATG +
Preference number: 2 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRFWLPL*HRFWSM
Trigger: CATGGACCAAAAACGGTGCCATAAGGGAAGCCAGAA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGCCATCCAACTGTCAGTaGCCCATCACCTCCGGACAA +
Preference number: 2 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRPSNCQ*PITSGQ
Trigger: TTGTCCGGAGGTGATGGGCCACTGACAGTTGGATGG...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 90 bp CTTTGTGAGGCCCCTGTGTATCACTGTGTCAAAGGCATGCGAATCTaGCAGATGATGCAGTACCAGGCCCTGTCCCCGCTCATATTACCT +
Preference number: 2 (lower is better)
Translates to: LCEAPVYHCVKGMRI*QMMQYQALSPLILP
Trigger: AGGTAATATGAGCGGGGACAGGGCCTGGTACTGCATCATCTGCAAGATTCGCATGCCTTTGACACAGTGATACACAGGGGCCTCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 90 bp CAGATTCCTCAGAAGCCCTCACAGCATTATCACTCAGCTTTCTGGTaGCTTCCATGCAGCTCCCAGAGGGCAAGGGAGCCATTAGTTGGT +
Preference number: 2 (lower is better)
Translates to: QIPQKPSQHYHSAFW*LPCSSQRAREPLVG
Trigger: ACCAACTAATGGCTCCCTTGCCCTCTGGGAGCTGCATGGAAGCAACCAGAAAGCTGAGTGATAATGCTGTGAGGGCTTCTGAGGAATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCAATCAGAATTCCTGTaGGCTGTCCTCCAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGQSEFL*AVLQSH
Trigger: ATGGCTCTGGAGGACAGCTCACAGGAATTCTGATTG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCTCTGCACTGGTAGATaGGGGGCCTCAGGGCTCACT +
Preference number: 2 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLCTGR*GASGLT
Trigger: AGTGAGCCCTGAGGCCCCTCATCTACCAGTGCAGAG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTGGCCCCTAGAGAATTaGACATGCAAGAAAATCATC +
Preference number: 2 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRWPLEN*TCKKII
Trigger: GATGATTTTCTTGCATGTGCAATTCTCTAGGGGCCA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTCTATGACCCAAGGATaGGATCTCTCCTTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRSMTQG*DLSFSF
Trigger: GAAAGAAAAGGAGAGATCCCATCCTTGGGTCATAGA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATTGGTGACACCACCTTaGGTCAGCTCTGTAATGGGC +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFILVTPP*VSSVMG
Trigger: GCCCATTACAGAGCTGACCCAAGGTGGTGTCACCAA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCAAGACATTGCAAGATaGGAGGTGGGGGAGGTTAAG +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGQDIAR*EVGEVK
Trigger: CTTAACCTCCCCCACCTCCCATCTTGCAATGTCTTG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGCCCAGCATGTCAGTGTaGAAGAGTCGCCAAAAGGAC +
Preference number: 2 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTPSMSV*KSRQKD
Trigger: GTCCTTTTGGCGACTCTTCCACACTGACATGCTGGG...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTGGGTCCACACCAACATaGGTTCTGTTATGTTGCTCC +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGGSTPT*VLLCCS
Trigger: GGAGCAACATAACAGAACCCATGTTGGTGTGGACCC...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAACAGGGCCTGTGTCCCTaGGGATTGTCTGGTCAGGCT +
Preference number: 2 (lower is better)
Translates to: ESDRMASLRTTNGILRNEQGLCP*GLSGQA
Trigger: AGCCTGACCAGACAATCCCCAGGGACACAGGCCCTG...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACAGCCTTCTTTCCTGTaGGTCCTATATTGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIQPSFL*VLYCWP
Trigger: TGGCCAGCAATATAGGACTCACAGGAAAGAAGGCTG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACACTCCTGACCTCAGGTaGTCTGCCCACCTCGCCCTC +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHTPDLR*SAHLAL
Trigger: GAGGGCGAGGTGGGCAGATCACCTGAGGTCAGGAGT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTTCTCTTCCTGTTAGTTaGGTCAGACACCAAGGACAG +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGSLPVS*VRHQGQ
Trigger: CTGTCCTTGGTGTCTGACTCAACTAACAGGAAGAGA...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATGGGAAGCTACAGATCTaGCTGCTCAGCCTAGCCAGC +
Preference number: 2 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHGKLQI*LLSLAS
Trigger: GCTGGCTAGGCTGAGCAGTCAGATCTGTAGCTTCCC...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACAGCCCACCTCACTGTaGCCTCTAAAGGAGATCTTA +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIQPTSL*PLKEIL
Trigger: TAAGATCTCCTTTAGAGGGCACAGTGAGGTGGGCTG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACTTAGCGCAAATATGTaGCAAGGGAAGAAGGGGGAG +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFILSANM*QGKKGE
Trigger: CTCCCCCTTCTTCCCTTGGCACATATTTGCGCTAAG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGGAGGTTAAGGGAATGTaGTGGCTGACATGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTEVKGM*WLTWSV
Trigger: CACTGACCATGTCAGCCAGCACATTCCCTTAACCTC...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCACTCTTCTGGGGTATaGCTTAAAAACAGCATCTGC +
Preference number: 2 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQHSSGV*LKNSIC
Trigger: GCAGATGCTGTTTTTAAGGCATACCCCAGAAGAGTG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTGAGCCACTTAAACACTaGGAGGCAGTCTCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGEPLKH*EAVSLE
Trigger: TTCTAGAGAGACTGCCTCCCAGTGTTTAAGTGGCTC...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGTTAAGGGAATGTGCTaGCTGACATGGTCAGTGGTC +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIVKGMC*LTWSVV
Trigger: GACCACTGACCATGTCAGCCAGCACATTCCCTTAAC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGCATAAACCTCAAGTCTaGCAGCCACTCTTCTGGGGT +
Preference number: 2 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRHKPQV*QPLFWG
Trigger: ACCCCAGAAGAGTGGCTGCCAGACTTGAGGTTTATG...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 90 bp ATTCACTCCGGGCAGGAAAGAAATCAAGATTCTCTGTGGCTTAGGTaGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGCCCCAT +
Preference number: 2 (lower is better)
Translates to: IHSGQERNQDSLWLR*KDNTLQAWSCQRPH
Trigger: ATGGGGCCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGAATCTTGATTTCTTTCCTGCCCGGAGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGGGGAAGTGCATGGGTaGCATGAAGAAGGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLGEVHG*HEEGED
Trigger: ATCTTCACCTTCTTCATGTCACCCATGCACTTCCCC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCTCTGCACTGGTAGATaGGGGGCCTCAGGGCTCACT +
Preference number: 2 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSLCTGR*GASGLT
Trigger: AGTGAGCCCTGAGGCCCCTCATCTACCAGTGCAGAG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTGTTCTATGCTAAGATaGACCAAACACCAACCTTCA +
Preference number: 2 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRCSMLR*TKHQPS
Trigger: TGAAGGTTGGTGTTTGGTTCATCTTAGCATAGAACA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGTCACTCAGTCAGTACTaGATCAGTTGTTATGGAGTC +
Preference number: 2 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQSLSQY*ISCYGV
Trigger: GACTCCATAACAACTGATTCAGTACTGACTGAGTGA...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAAGGGGAGCACAGGCTaGACACATGGTGAACAGCTC +
Preference number: 2 (lower is better)
Translates to: PQPIPHPVHLLRANLETHKGSTG*THGEQL
Trigger: GAGCTGTTCACCATGTGTGCAGCCTGTGCTCCCCTT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAACTCACACAGCAAACCTaGAGCCTTCTGAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: ESDRMASLRTTNGILRNELTQQT*SLLRSG
Trigger: CCCAGACCTCAGAAGGCTGCAGGTTTGCTGTGTGAG...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGCTGCAAATTCCAGAGTaGTTGCTAGTGGAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTLQIPE*LLVEKS
Trigger: GCTCTTCTCCACTAGCAAGCACTCTGGAATTTGCAG...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAACTTCACTGGCAAGTaGGGACAGAGTGGAGAATCA +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFINFTGK*GQSGES
Trigger: TGATTCTCCACTCTGTCCCCACTTGCCAGTGAAGTT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAGGCAAGACTCTTTGTaGGCTAACCAGCCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIRQDSL*ANQPSF
Trigger: GAAAGAAGGCTGGTTAGCCCACAAAGAGTCTTGCCT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATAAGCACCCCCAGGGCTaGCTTTCTAGAGACAGACTC +
Preference number: 2 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHKHPQG*LSRDRL
Trigger: GAGTCTGTCTCTAGAAAGCCAGCCCTGGGGGTGCTT...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 90 bp CACACAGAGAGCTTTTGGGTCCACACCAACATGGGTTCTGTTATGTaGCTCCTCAGCAACATAAACCTCAAGTCTGGCAGCCACTCTTCT +
Preference number: 2 (lower is better)
Translates to: HTESFWVHTNMGSVM*LLSNINLKSGSHSS
Trigger: AGAAGAGTGGCTGCCAGACTTGAGGTTTATGTTGCTGAGGAGCAACATAACAGAACCCATGTTGGTGTGGACCCAAAAGCTCTCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAAGCAGACTGCTGGCCTaGAGCAGCATGCCCACTCCA +
Preference number: 2 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGSRLLA*SSMPTP
Trigger: TGGAGTGGGCATGCTGCTGCAGGCCAGCAGTCTGCT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGAGGCCTCGAAGTTATTaGCAGATCAACTCAAAATTA +
Preference number: 2 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRRPRSY*QINSKL
Trigger: TAATTTTGAGTTGATCTGGCAATAACTTCGAGGCCT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGAGTTTCAGCTGTAATTaGCTTGAGCTGCTCTTAACA +
Preference number: 2 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQSFSCN*LELLLT
Trigger: TGTTAAGAGCAGCTCAAGGCAATTACAGCTGAAACT...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCTGATAGAAGGGAGCTaGCCAATTACTGCTCGGGGA +
Preference number: 2 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLIEGS*PITARG
Trigger: TCCCCGAGCAGTAATTGGCCAGCTCCCTTCTATCAG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTGTTCACTCATTAGGCTaGAGCGGAATTTTCAATCCT +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGVHSLG*SGIFNP
Trigger: AGGATTGAAAATTCCGCTCCAGCCTAATGAGTGAAC...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 90 bp CAGCCATCCTGTTCACTCATTAGGCTGGAGCGGAATTTTCAATCCTaGTCAACTAGTGAGGAGAATGAAAAACATGCCAGGGTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: QPSCSLIRLERNFQS*STSEENEKHARVGP
Trigger: TGGGCCAACCCTGGCATGTTTTTCATTCTCCTCACTAGTTGACAAGGATTGAAAATTCCGCTCCAGCCTAATGAGTGAACAGGATGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CAA 90 bp TCCCTTGTAGAAGAGAGTGCGAACTCACTTATAAGGAAGCATAATTaGCTAGGCCTTGGAGAGGAGGCAAAGAGTTCCTGGAGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: SLVEESANSLIRKHN*LGLGEEAKSSWSRR
Trigger: CCTTCTGCTCCAGGAACTCTTTGCCTCCTCTCCAAGGCCTAGCAAATTATGCTTCCTTATAAGTGAGTTCGCACTCTCTTCTACAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAAGAGGTCAACCTTCTaGGGAGGTCAGCAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: PQPIPHPVHLLRANLETHKRSTF*GGQQSH
Trigger: ATGAGACTGCTGACCTCCTCAGAAGGTTGACCTCTT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTACATACTCACAGTTTTaGATAAAACAAGCACAGGTG +
Preference number: 2 (lower is better)
Translates to: CILSGLQVFLDQTGGQAATYSQF*IKQAQV
Trigger: CACCTGTGCTTGTTTTATTCAAAACTGTGAGTATGT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATCTGAGGGCAAATCTTaGAACTCATTGCCATATTCC +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFISEGKS*NSLPYS
Trigger: GGAATATGGCAATGAGTTTCAAGATTTGCCCTCAGA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCCATCTCTATTTCTGTaGCTAGCCTGTACTTTTTCA +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGPSLFL*LACTFS
Trigger: TGAAAAAGTACAGGCTAGTCACAGAAATAGAGATGG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATGACATGGAATGTATGTaGACTCCCCTCCCACAGCAT +
Preference number: 2 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHDMECM*TPLPQH
Trigger: ATGCTGTGGGAGGGGAGTTCACATACATTCCATGTC...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGACATTCAAGTTATCATaGGTGCGGACACACACATAC +
Preference number: 2 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRTFKLS*VRTHTY
Trigger: GTATGTGTGTGTCCGCACTCATGATAACTTGAATGT...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTCAGGAAGCCTGCAGGTaGCTGCTCACCAGAGGGCGA +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPQEACR*LLTRGR
Trigger: TCGCCCTCTGGTGAGCAGTCACCTGCAGGCTTCCTG...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACTGTCCTCCATGCAGTaGACATACTTACAGATAATG +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFILSSMQ*TYLQIM
Trigger: CATTATCTGTAAGTATGTGCACTGCATGGAGGACAG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAACAGCCCACCTCACTGTaGCCTCTAAAGGAGATCTTA +
Preference number: 2 (lower is better)
Translates to: ESDRMASLRTTNGILRNEQPTSL*PLKEIL
Trigger: TAAGATCTCCTTTAGAGGGCACAGTGAGGTGGGCTG...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGAGGTTAAGGGAATGTaGTGGCTGACATGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: PQPIPHPVHLLRANLETHEVKGM*WLTWSV
Trigger: CACTGACCATGTCAGCCAGCACATTCCCTTAACCTC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATCTGATATGAAGAGGTaGTTGGTTTACCAGTGCTGT +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFISDMKR*LVYQCC
Trigger: ACAGCACTGGTAAACCAAGCACCTCTTCATATCAGA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGGTAATGGGCCACAAGTaGCTGATAAATCCAAACTTC +
Preference number: 2 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRVMGHK*LINPNF
Trigger: GAAGTTTGGATTTATCAGCCACTTGTGGCCCATTAC...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCCAAGAGCAGACTGCTaGCCTGCAGCAGCATGCCCA +
Preference number: 2 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSPRADC*PAAACP
Trigger: TGGGCATGCTGCTGCAGGCCAGCAGTCTGCTCTTGG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGTGAGCCACTGCGCCTaGCCTGGGAACTTCATACTA +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHVSHCA*PGNFIL
Trigger: TAGTATGAAGTTCCCAGGCCAGGCGCAGTGGCTCAC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAACTCGGCACAGCACTTTaGGCCTTTGAGAATATGAGC +
Preference number: 2 (lower is better)
Translates to: ESDRMASLRTTNGILRNELGTAL*AFENMS
Trigger: GCTCATATTCTCAAAGGCCCAAAGTGCTGTGCCGAG...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATAGCTTCTTGGCTGAATaGGGCCCTGAAGAACAGAGA +
Preference number: 2 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHSFLAE*GPEEQR
Trigger: TCTCTGTTCTTCAGGGCCCCATTCAGCCAAGAAGCT...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACAGGCTGCACACATGGTaGACAGCTCTCAATCACCCA +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHRLHTW*TALNHP
Trigger: TGGGTGATTGAGAGCTGTTCACCATGTGTGCAGCCT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATGTTCTATGCTAAGATaGACCAAACACCAACCTTCA +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFICSMLR*TKHQPS
Trigger: TGAAGGTTGGTGTTTGGTTCATCTTAGCATAGAACA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGGTCAGGTTACTTCCCTaGACCAAAGTATTCATAACT +
Preference number: 2 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRVRLLP*TKVFIT
Trigger: AGTTATGAATACTTTGGTTCAGGGAAGTAACCTGAC...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACCATCTCTATTTCTGTaGCTAGCCTGTACTTTTTCA +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIPSLFL*LACTFS
Trigger: TGAAAAAGTACAGGCTAGTCACAGAAATAGAGATGG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTTTGATAGGTGGAAAATaGGATGCCAACAATATGATC +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGLIGGK*DANNMI
Trigger: GATCATATTGTTGGCATCTCATTTTCCACCTATCAA...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTTTGATCAACAATATTTaGGCACTTACTATTGCCTGG +
Preference number: 2 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGLINNI*ALTIAW
Trigger: CCAGGCAATAGTAAGTGCTCAAATATTGTTGATCAA...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGAGCTGGCCAATTACTaGTCGGGGAAAACTGCAAAT +
Preference number: 2 (lower is better)
Translates to: PQPIPHPVHLLRANLETHELANY*SGKTAN
Trigger: ATTTGCAGTTTTCCCCGAGCAGTAATTGGCCAGCTC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGTCTAACAAGGCACTCTaGTATACATTCAGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTSNKAL*YTFSLA
Trigger: AGCAAGACTGAATGTATAGCAGAGTGCCTTGTTAGA...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCCCAGGATCTTGCACTaGAACTCTTCTGGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHPRILH*NSSGFP
Trigger: AGGGAAGCCAGAAGAGTTGCAGTGCAAGATCCTGGG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGGTCGTGGTAGAGACTaGTTAAGTCTGTCTACTGCT +
Preference number: 2 (lower is better)
Translates to: PQPIPHPVHLLRANLETHGRGRD*LSLSTA
Trigger: AGCAGTAGACAGACTTAACCAGTCTCTACCACGACC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAGGTCGTGGTAGAGACTaGTTAAGTCTGTCTACTGCT +
Preference number: 2 (lower is better)
Translates to: ESDRMASLRTTNGILRNEGRGRD*LSLSTA
Trigger: AGCAGTAGACAGACTTAACCAGTCTCTACCACGACC...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGCTTTCTACTCTCTCCTaGAACAAAAGATATAGTCCC +
Preference number: 2 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRLSTLS*NKRYSP
Trigger: GGGACTATATCTTTTGTTCCAGGAGAGAGTAGAAAG...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTGGAGAATCAGGCAGTaGCAGCAGAGGGGAGACTAT +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHWRIRQ*QQRGDY
Trigger: ATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCAGCAGTCTCATCAGTaGCCTTCTTCCTCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGQQSHQ*PSSSPL
Trigger: CAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGAGCCACTTAAACACTaGGAGGCAGTCTCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVEPLKH*EAVSLE
Trigger: TTCTAGAGAGACTGCCTCCCAGTGTTTAAGTGGCTC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTAGCATGCCCACTCCATaGCCATTCCTAGGAGCAGAG +
Preference number: 2 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGSMPTP*PFLGAE
Trigger: CTCTGCTCCTAGGAATGGCCATGGAGTGGGCATGCT...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTCCAAGAGCAGACTGCTaGCCTGCAGCAGCATGCCCA +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPPRADC*PAAACP
Trigger: TGGGCATGCTGCTGCAGGCCAGCAGTCTGCTCTTGG...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCCACTGCGCCTGGCCTaGGAACTTCATACTACTAGA +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHPLRLA*ELHTTR
Trigger: TCTAGTAGTATGAAGTTCCCAGGCCAGGCGCAGTGG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTACCTGGAGTCTGGCTTaGGCAATCCTGAACTGGTCC +
Preference number: 2 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGTWSLA*AILNWS
Trigger: GGACCAGTTCAGGATTGCCCAAGCCAGACTCCAGGT...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 90 bp CTGGTCAGCAATAAGCATGAGAGGTGGAGGACACAGACTCAGCAATaGGATTTTTCTTCTTTGGACACCAAGAAGCCACTGATGATACTG +
Preference number: 2 (lower is better)
Translates to: LVSNKHERWRTQTQQ*DFSSLDTKKPLMIL
Trigger: CAGTATCATCAGTGGCTTCTTGGTGTCCAAAGAAGAAAAATCCAATTGCTGAGTCTGTGTCCTCCACCTCTCATGCTTATTGCTGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTTAAACTCTGTTTCCTaGTGGCCCCTAGAGAATTGC +
Preference number: 2 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVLNSVS*WPLENC
Trigger: GCAATTCTCTAGGGGCCATCAGGAAACAGAGTTTAA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCAATCAGAATTCCTGTaGGCTGTCCTCCAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHQSEFL*AVLQSH
Trigger: ATGGCTCTGGAGGACAGCTCACAGGAATTCTGATTG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAGTACTAAAAACATCTaGTATGAAGAGGTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFISTKNI*YEEVLG
Trigger: ACCAAGCACCTCTTCATATCAGATGTTTTTAGTACT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCATCTCCTCATGCCCTaGCAGCTATTTATAAGCTCT +
Preference number: 2 (lower is better)
Translates to: PQPIPHPVHLLRANLETHHLLMP*QLFISS
Trigger: AGAGCTTATAAATAGCTGGCAGGGCATGAGGAGATG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGGTCAGTGGTCTGTGTaGTGCCCTTCAGTGCATAAT +
Preference number: 2 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSGQWSV*CPSVHN
Trigger: ATTATGCACTGAAGGGCAGCACACAGACCACTGACC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGAGGTATATCTCAATATaGAAGACATTGCAAGATGGG +
Preference number: 2 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRRYISI*KTLQDG
Trigger: CCCATCTTGCAATGTCTTGCATATTGAGATATACCT...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTAAGCCTGCAGGTGACTaGTCACCAGAGGGCGATCTC +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPKPAGD*SPEGDL
Trigger: GAGATCGCCCTCTGGTGAGCAGTCACCTGCAGGCTT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATATGGACACAGCTCACTaGCTGAGTTCATACCAAAGA +
Preference number: 2 (lower is better)
Translates to: PQPIPHPVHLLRANLETHMDTAH*LSSYQR
Trigger: TCTTTGGTATGAACTCAGCCAGTGAGCTGTGTCCAT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCAAGACATTGCAAGATaGGAGGTGGGGGAGGTTAAG +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHQDIAR*EVGEVK
Trigger: CTTAACCTCCCCCACCTCCCATCTTGCAATGTCTTG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACCACTGCGCCTGGCCTaGGAACTTCATACTACTAGA +
Preference number: 2 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGPLRLA*ELHTTR
Trigger: TCTAGTAGTATGAAGTTCCCAGGCCAGGCGCAGTGG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGTAAGCACGGACAGCTaGACTTCAGTGCGCACTTCA +
Preference number: 2 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGVSTDS*TSVRTS
Trigger: TGAAGTGCGCACTGAAGTCCAGCTGTCCGTGCTTAC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTGGAATCCCCACTTTTaGCACTGCTGTAAGCACGGA +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHWNPHF*HCCKHG
Trigger: TCCGTGCTTACAGCAGTGCCAAAAGTGGGGATTCCA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACACACAGCTCACTGGCTaGGTTCATACCAAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHTQLTG*VHTKEA
Trigger: AGCTTCTTTGGTATGAACTCAGCCAGTGAGCTGTGT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAAAGAGGTCAACCTTCTaGGGAGGTCAGCAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGKRSTF*GGQQSH
Trigger: ATGAGACTGCTGACCTCCTCAGAAGGTTGACCTCTT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATTCTGAGGGCAAATCTTaGAACTCATTGCCATATTCC +
Preference number: 2 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHSEGKS*NSLPYS
Trigger: GGAATATGGCAATGAGTTTCAAGATTTGCCCTCAGA...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATCTTAACAACAACTTGTaGTCTGCCAACTGCAGTTCT +
Preference number: 2 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHLNNNL*SANCSS
Trigger: AGAACTGCAGTTGGCAGATCACAAGTTGTTGTTAAG...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGTGGTGCTCTAAAATCTaGTCTAAATTTAGGATCTAC +
Preference number: 2 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRWCSKI*SKFRIY
Trigger: GTAGATCCTAAATTTAGAGCAGATTTTAGAGCACCA...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACCTGGTAACCAAAACTaGGCTGATGCTAAGGATGGC +
Preference number: 2 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGPGNQN*ADAKDG
Trigger: GCCATCCTTAGCATCAGCCCAGTTTTGGTTACCAGG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATTCTATGACCCAAGGATaGGATCTCTCCTTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHSMTQG*DLSFSF
Trigger: GAAAGAAAAGGAGAGATCCCATCCTTGGGTCATAGA...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTGTGAGCCACTGCGCCTaGCCTGGGAACTTCATACTA +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPVSHCA*PGNFIL
Trigger: TAGTATGAAGTTCCCAGGCCAGGCGCAGTGGCTCAC...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAAGAGACTTTCTGGAGTaGGAAACATGTAATGGGATG +
Preference number: 2 (lower is better)
Translates to: ESDRMASLRTTNGILRNERDFLE*ETCNGM
Trigger: CATCCCATTACATGTTTCCCACTCCAGAAAGTCTCT...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGAATGAACCCTATGTCTaGTTCAACATTCAAGTTATC +
Preference number: 2 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRNEPYV*FNIQVI
Trigger: GATAACTTGAATGTTGAACCAGACATAGGGTTCATT...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAAGGCAAAACTCCCAGTaGAGCTTTTGTTACACTTCA +
Preference number: 2 (lower is better)
Translates to: ESDRMASLRTTNGILRNERQNSQ*SFCYTS
Trigger: TGAAGTGTAACAAAAGCTCCACTGGGAGTTTTGCCT...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACATCTTAGAGCTCCACTaGCAGCTATTTCATTCAGGG +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHILELH*QLFHSG
Trigger: CCCTGAATGAAATAGCTGTCAGTGGAGCTCTAAGAT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGCACAGGAGGCTTCTTaGAGTTCTAGTCCTCTTTAT +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHAQEAS*SSSPLY
Trigger: ATAAAGAGGACTAGAACTTCAAGAAGCCTCCTGTGC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTATGATGTTCTCAAGCTaGGGTTTGGGCAATAGCCAC +
Preference number: 2 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGMMFSS*GLGNSH
Trigger: GTGGCTATTGCCCAAACCTCAGCTTGAGAACATCAT...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCACCAAACCATGGGGGTaGATGGGACACGTCAAGATA +
Preference number: 2 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSTKPWG*MGHVKI
Trigger: TATCTTGACGTGTCCCATTCACCCCCATGGTTTGGT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCCCGCTCATATTACCTaGATAGCTCTGATTTCCACG +
Preference number: 2 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGPAHIT*IALIST
Trigger: CGTGGAAATCAGAGCTATTCAGGTAATATGAGCGGG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTTGGGGAGTGAGTTGGTaGTTTCAGATGGCTATCATC +
Preference number: 2 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGWGVSW*FQMAII
Trigger: GATGATAGCCATCTGAAATCACCAACTCACTCCCCA...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTCAAGGGAAGGCAACTaGAAGTTTGTGCAGCTGAAT +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHSREGN*KFVQLN
Trigger: ATTCAGCTGCACAAACTTGCAGTTGCCTTCCCTTGA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTGAGCTGGCCAATTACTaGTCGGGGAAAACTGCAAAT +
Preference number: 2 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGELANY*SGKTAN
Trigger: ATTTGCAGTTTTCCCCGAGCAGTAATTGGCCAGCTC...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCTTAGCGCAAATATGTaGCAAGGGAAGAAGGGGGAG +
Preference number: 2 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSLSANM*QGKKGE
Trigger: CTCCCCCTTCTTCCCTTGGCACATATTTGCGCTAAG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTGTGATCTTGGCTCACTaGAACCTTTGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPVILAH*NLCLLG
Trigger: ACCCAGGAGGCAAAGGTTGCAGTGAGCCAAGATCAC...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAATCAAGTTATCATGAGTaGGGACACACACATACTATC +
Preference number: 2 (lower is better)
Translates to: ESDRMASLRTTNGILRNESSYHE*GHTHTI
Trigger: GATAGTATGTGTGTGTCCGCACTCATGATAACTTGA...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACATGGACACAGCTCACTaGCTGAGTTCATACCAAAGA +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHMDTAH*LSSYQR
Trigger: TCTTTGGTATGAACTCAGCCAGTGAGCTGTGTCCAT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATACATACTCACAGTTTTaGATAAAACAAGCACAGGTG +
Preference number: 2 (lower is better)
Translates to: PQPIPHPVHLLRANLETHTYSQF*IKQAQV
Trigger: CACCTGTGCTTGTTTTATTCAAAACTGTGAGTATGT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACATGTCCGACCTCTTTTaGTTCCCTGAAACTTTCTTG +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHMSDLF*FPETFL
Trigger: CAAGAAAGTTTCAGGGAATCAAAAGAGGTCGGACAT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTAGTGGAGGGGGTAGGTaGATGGAAAGCAGATTATTA +
Preference number: 2 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGSGGGR*MESRLL
Trigger: TAATAATCTGCTTTCCATTCACCTACCCCCTCCACT...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGAGGAACTTTGTATCTaGCAGGGCTTTCTTCATCTT +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHEELCI*QGFLHL
Trigger: AAGATGAAGAAAGCCCTGGCAGATACAAAGTTCCTC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTTGGAATCCCCACTTTTaGCACTGCTGTAAGCACGGA +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPWNPHF*HCCKHG
Trigger: TCCGTGCTTACAGCAGTGCCAAAAGTGGGGATTCCA...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACAGAGACTTTCTGGAGTaGGAAACATGTAATGGGATG +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHRDFLE*ETCNGM
Trigger: CATCCCATTACATGTTTCCCACTCCAGAAAGTCTCT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTTTCAAATACAGAGTGTaGGCAGGGCCAGAGAGAATT +
Preference number: 2 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGFKYRV*AGPERI
Trigger: AATTCTCTCTGGCCCTGCCCACACTCTGTATTTGAA...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTTCCACAGGTTACAGTaGCTCTTTTTCTCATCCTGC +
Preference number: 2 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSFHRLQ*LFFSSC
Trigger: GCAGGATGAGAAAAAGAGTCACTGTAACCTGTGGAA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTAGGCAAGGAGTTATGTaGACATGTTCTATGCTAAGA +
Preference number: 2 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSRQGVM*TCSMLR
Trigger: TCTTAGCATAGAACATGTGCACATAACTCCTTGCCT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTGCTTGGTTTACCAGTaGTGTAAGATAATGGTAGTG +
Preference number: 2 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSCLVYQ*CKIMVV
Trigger: CACTACCATTATCTTACAGCACTGGTAAACCAAGCA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCACAGAGATTGTTCATaGTCATGTGGCTTAAGGAAA +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHHRDCS*SCGLRK
Trigger: TTTCCTTAAGCCACATGAGCATGAACAATCTCTGTG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCTAATTTTAAACAGTTaGAGGGAGGGGGTGTTTAAC +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHLILNS*REGVFN
Trigger: GTTAAACACCCCCTCCCTGCAACTGTTTAAAATTAG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTTCTTGCTTCTGTATTTaGCTCATGCCAAAATGCCCT +
Preference number: 2 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGSCFCI*LMPKCP
Trigger: AGGGCATTTTGGCATGAGGCAAATACAGAAGCAAGA...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGTAATGGGCCACAAGTaGCTGATAAATCCAAACTTC +
Preference number: 2 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGVMGHK*LINPNF
Trigger: GAAGTTTGGATTTATCAGCCACTTGTGGCCCATTAC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTAGGCAAGACTCTTTGTaGGCTAACCAGCCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPRQDSL*ANQPSF
Trigger: GAAAGAAGGCTGGTTAGCCCACAAAGAGTCTTGCCT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTACATTGAAATTTACATaGGCAAGGCACCACGAACAT +
Preference number: 2 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSTLKFT*ARHHEH
Trigger: ATGTTCGTGGTGCCTTGCCCATGTAAATTTCAATGT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACATAAAGCTAATAACTTaGTTTTGTGGGCAGCCATCC +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHIKLIT*FCGQPS
Trigger: GGATGGCTGCCCACAAAACCAAGTTATTAGCTTTAT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTCAGCCTTCTGAGGTCTaGGAAAAGCAGAATGCCTTT +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPQPSEV*EKQNAF
Trigger: AAAGGCATTCTGCTTTTCCCAGACCTCAGAAGGCTG...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 90 bp GGGTTTGGTGCTCTAAAATCTGCTCTAAATTTAGGATCTACATGTTaGCCTTTTCATCTATTCTCCTCTCATAATGCGGCAGTTGTTGCT +
Preference number: 2 (lower is better)
Translates to: GFGALKSALNLGSTC*PFHLFSSHNAAVVA
Trigger: AGCAACAACTGCCGCATTATGAGAGGAGAATAGATGAAAAGGCAAACATGTAGATCCTAAATTTAGAGCAGATTTTAGAGCACCAAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTTTAAACTCTGTTTCCTaGTGGCCCCTAGAGAATTGC +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPLNSVS*WPLENC
Trigger: GCAATTCTCTAGGGGCCATCAGGAAACAGAGTTTAA...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTAGTACTAAAAACATCTaGTATGAAGAGGTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSSTKNI*YEEVLG
Trigger: ACCAAGCACCTCTTCATATCAGATGTTTTTAGTACT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTTTCCACAGGTTACAGTaGCTCTTTTTCTCATCCTGC +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPFHRLQ*LFFSSC
Trigger: GCAGGATGAGAAAAAGAGTCACTGTAACCTGTGGAA...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACTATCTCACATTCTTTaGCCATCACCCAGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGLSHIL*PSPREK
Trigger: TTTTTCTCTGGGTGATGGCCAAAGAATGTGAGATAG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTTGTTCATGCTCATGTaGCTTAAGGAAAAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHLFMLM*LKEKFQ
Trigger: TTGGAACTTTTCCTTAAGCCACATGAGCATGAACAA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAACCCAGAGACTTTCTaGAGTGGGAAACATGTAATG +
Preference number: 2 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSNPETF*SGKHVM
Trigger: CATTACATGTTTCCCACTCCAGAAAGTCTCTGGGTT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CAA 90 bp GTTTTTATTTCTGTAACCAGTTACAGGGAGAAGGCCTCGAAGTTATaGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACC +
Preference number: 2 (lower is better)
Translates to: VFISVTSYREKASKL*PDQLKITVSHILYT
Trigger: GGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCGAGGCCTTCTCCCTGTAACTGGTTACAGAAATAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGCAAGTTTGTGCAGCTaGATTTCTGTAAAGTTAAGA +
Preference number: 2 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGASLCS*ISVKLR
Trigger: TCTTAACTTTACAGAAATTCAGCTGCACAAACTTGC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR TCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTATGTCCGACCTCTTTTaGTTCCCTGAAACTTTCTTG +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPMSDLF*FPETFL
Trigger: CAAGAAAGTTTCAGGGAATCAAAAGAGGTCGGACAT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAGGCAAGGAGTTATGTaGACATGTTCTATGCTAAGA +
Preference number: 2 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSRQGVM*TCSMLR
Trigger: TCTTAGCATAGAACATGTGCACATAACTCCTTGCCT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTAACCCAGAGACTTTCTaGAGTGGGAAACATGTAATG +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPNPETF*SGKHVM
Trigger: CATTACATGTTTCCCACTCCAGAAAGTCTCTGGGTT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGTCAAGATAAAAAGCTaGAATAAACCCAGAGACTTT +
Preference number: 2 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHVKIKS*NKPRDF
Trigger: AAAGTCTCTGGGTTTATTCCAGCTTTTTATCTTGAC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CAA 90 bp CTGAATATAAAAACAGTACTAAAAACATCTGATATGAAGAGGTGCTaGGTTTACCAGTGCTGTAAGATAATGGTAGTGGAGGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: LNIKTVLKTSDMKRC*VYQCCKIMVVEVSM
Trigger: CATGGACACCTCCACTACCATTATCTTACAGCACTGGTAAACCAAGCACCTCTTCATATCAGATGTTTTTAGTACTGTTTTTATATTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGATTTATCAGCTAAATaGCTTGACATGGAATGTATG +
Preference number: 2 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGDLSAK*LDMECM
Trigger: CATACATTCCATGTCAAGGCATTTAGCTGATAAATC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR GCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCATGATGGCCACAGAGTaGTACTTACAAACAGAAATG +
Preference number: 2 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCMMATE*YLQTEM
Trigger: CATTTCTGTTTGTAAGTAGCACTCTGTGGCCATCAT...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
3UTR-3UTR GCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCATGCTAAAGTTCCTCTaGATTCACCAGAATGCAGTA +
Preference number: 2 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSMLKFL*IHQNAV
Trigger: TACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
3UTR-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTTGTTCATGCTCATGTaGCTTAAGGAAAAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSLFMLM*LKEKFQ
Trigger: TTGGAACTTTTCCTTAAGCCACATGAGCATGAACAA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CAA 90 bp AAATGTCAGGTTACTTCCCTGAACCAAAGTATTCATAACTCAAAATaGAGACGCTTAGTAGGACCCAAAGATCTTTCCTGGAAACTTTTT +
Preference number: 2 (lower is better)
Translates to: KCQVTSLNQSIHNSK*RRLVGPKDLSWKLF
Trigger: AAAAAGTTTCCAGGAAAGATCTTTGGGTCCTACTAAGCGTCTCAATTTTGAGTTATGAATACTTTGGTTCAGGGAAGTAACCTGACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CAA 90 bp ATTTCATTTACAGTGAGGGAAAGAACAGTACCACCATTTATTCATTaGATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAAC +
Preference number: 2 (lower is better)
Translates to: ISFTVRERTVPPFIH*ILFLPHTTITFQNN
Trigger: GTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATCAAATGAATAAATGGTGGTACTGTTCTTTCCCTCACTGTAAATGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
3UTR-3UTR TCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTAAAAAGGTGCTTTTCTaGGGATGGATTTATCAGCTA +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPKKVLF*GWIYQL
Trigger: TAGCTGATAAATCCATCCTCAGAAAAGCACCTTTTT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR TCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATAGTTATAAAGATAGATaGTGGCCACAGAGTGCTACT +
Preference number: 2 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYSYKDR*WPQSAT
Trigger: AGTAGCACTCTGTGGCCATCATCTATCTTTATAACT...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
3UTR-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTTTATTCTTCATGAATTaGCTTCTAGGCAACCCAGTA +
Preference number: 2 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPLFFMN*LLGNPV
Trigger: TACTGGGTTGCCTAGAAGCCAATTCATGAAGAATAA...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp GCGCGGCCATGCCACAGGACACCAAGAGCAGACTGCTaGCCTGCAGCAGCATGCCCACTCCATGGCCATTCC +
Preference number: 3 (lower is better)
Translates to: ARPCHRTPRADC*PAAACPLHGHS
Trigger: GGAATGGCCATGGAGTGGGCATGCTGCTGCAGGCCAGCAGTCTGCTCTTGGTGTCCTGTGGCATGGCCGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp CCCAGGCTGCAGTGCAGTGGAGCAATCTCGGCTCACTaGAAACTCCACCTCCTGGGTTCACGCCATTCTCCT +
Preference number: 3 (lower is better)
Translates to: PRLQCSGAISAH*KLHLLGSRHSP
Trigger: AGGAGAATGGCGTGAACCCAGGAGGTGGAGTTTGCAGTGAGCCGAGATTGCTCCACTGCACTGCAGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp GAGGCCCCTTACAAGCTCAGAATAGCTGAAGGACCCTaGGGAGGAGGGGGTCTTGGAGTCACTGGACTTGGG +
Preference number: 3 (lower is better)
Translates to: EAPYKLRIAEGP*GGGGLGVTGLG
Trigger: CCCAAGTCCAGTGACTCCAAGACCCCCTCCTCCCCAGGGTCCTTCAGCTATTCTGAGCTTGTAAGGGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTTACTGGGGTCAGCCCTaGCCCAACACCCCAGGACAG +
Preference number: 3 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGYWGQP*PNTPGQ
Trigger: CTGTCCTGGGGTGTTGGGCAAGGGCTGACCCCAGTA...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTAAAAACATGCCAGGGTaGGCCCAGCAAGTCCAGTTT +
Preference number: 3 (lower is better)
Translates to: PLRPAELHTAARSWYALFKNMPG*AQQVQF
Trigger: AAACTGGACTTGCTGGGCCAACCCTGGCATGTTTTT...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTCTCATAATGCGGCAGTaGTTGCTACCACTGCTGACT +
Preference number: 3 (lower is better)
Translates to: PLRPAELHTAARSWYALFLIMRQ*LLPLLT
Trigger: AGTCAGCAGTGGTAGCAACAACTGCCGCATTATGAG...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp GGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGATCTaGCTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTC +
Preference number: 3 (lower is better)
Translates to: GKGAGPTGKLQI*LLSLASAFFSL
Trigger: GAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAGTCAGATCTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 72 bp TGTCAGTTGCTCTGTGGCAGCTGTTGGCCACTTAGTTaGCTTTGTGGTTCCAGAAGCAGTCCTGGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: CQLLCGSCWPLS*LCGSRSSPGRP
Trigger: GGGCCTCCCAGGACTGCTTCTGGAACCACAAAGGCAACTAAGTGGCCAACAGCTGCCACAGAGCAACTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp GCACTCCACCCTGCTGAGGCATTGGTGACACCACCTTaGGTCAGCTCTGTAATGGGCCACAAGTGGCTGATA +
Preference number: 3 (lower is better)
Translates to: ALHPAEALVTPP*VSSVMGHKWLI
Trigger: TATCAGCCACTTGTGGCCCATTACAGAGCTGACCCAAGGTGGTGTCACCAATGCCTCAGCAGGGTGGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp CTGTCAACCCTGCCACAGGTTGCTTTTCTAGAGGCCTaGCCTCTACTTCCAGCATGCGTGTGCACGCACACA +
Preference number: 3 (lower is better)
Translates to: LSTLPQVAFLEA*PLLPACVCTHT
Trigger: TGTGTGCGTGCACACGCATGCTGGAAGTAGAGGCCAGGCCTCTAGAAAAGCAACCTGTGGCAGGGTTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp GATTGTCTGGTCAGGCTTGCTGTTGACCCTTCCTCCTaGGCCCAGGCAACACACAGAGAGCTTTTGGGTCCA +
Preference number: 3 (lower is better)
Translates to: DCLVRLAVDPSS*AQATHRELLGP
Trigger: TGGACCCAAAAGCTCTCTGTGTGTTGCCTGGGCCCAGGAGGAAGGGTCAACAGCAAGCCTGACCAGACAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp CTGGAGCAGAAGGTACACACTTACAACCCCAGGCAATaGAGAGCTCCCCACACCAATTCACTCCGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: LEQKVHTYNPRQ*RAPHTNSLRAG
Trigger: TCCTGCCCGGAGTGAATTGGTGTGGGGAGCTCTCCATTGCCTGGGGTTGTAAGTGTGTACCTTCTGCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp GAGAGTGAGGGAGGACTGTCCCTCACTCCAGGAAGCTaGGAGGTGGAGTACGGTTGCTGGATGACAAATCGT +
Preference number: 3 (lower is better)
Translates to: ESEGGLSLTPGS*EVEYGCWMTNR
Trigger: ACGATTTGTCATCCAGCAACCGTACTCCACCTCCCAGCTTCCTGGAGTGAGGGACAGTCCTCCCTCACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTGCTAATAACTTGGTTTaGTGGGCAGCCATCCTGTTC +
Preference number: 3 (lower is better)
Translates to: PLRPAELHTAARSWYALFANNLV*WAAILF
Trigger: GAACAGGATGGCTGCCCACAAAACCAAGTTATTAGC...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp GATGCAGTACCAGGCCCTGTCCCCGCTCATATTACCTaGATAGCTCTGATTTCCACGGAGAGGGTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: DAVPGPVPAHIT*IALISTERVSQ
Trigger: CTGGCTGACCCTCTCCGTGGAAATCAGAGCTATTCAGGTAATATGAGCGGGGACAGGGCCTGGTACTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp TGTTCCACCTCACCTGGAGTCTGGCTTGGGCAATCCTaGACTGGTCCCACCATCCACTGGCCTGTATCCTTT +
Preference number: 3 (lower is better)
Translates to: CSTSPGVWLGQS*TGPTIHWPVSF
Trigger: AAAGGATACAGGCCAGTGGATGGTGGGACCAGTTCAGGATTGCCCAAGCCAGACTCCAGGTGAGGTGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp TCGCAGCCCTGTCCCTTGTCAGTTTACCACTGTGCCTaGCTCTCCCCCAATAAAGGGTCCAGGTTGTGTAGG +
Preference number: 3 (lower is better)
Translates to: SQPCPLSVYHCA*LSPNKGSRLCR
Trigger: CCTACACAACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGACAGGGCTGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp GAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTaGCCTGGCACACACGGTGACCACTCAGGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: ESVVMESCISET*PGTHGDHSGQQ
Trigger: CTGCTGGCCTGAGTGGTCACCGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp CTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATaGAGCTGCCAAAGGCCCCATCCAACTGTCAGTGGC +
Preference number: 3 (lower is better)
Translates to: LWLRLKDNTLQA*SCQRPHPTVSG
Trigger: GCCACTGACAGTTGGATGGGGCCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp CCTCAGAAGCCCTCACAGCATTATCACTCAGCTTTCTaGTTGCTTCCATGCAGCTCCCAGAGGGCAAGGGAG +
Preference number: 3 (lower is better)
Translates to: PQKPSQHYHSAF*LLPCSSQRARE
Trigger: CTCCCTTGCCCTCTGGGAGCTGCATGGAAGCAACCAGAAAGCTGAGTGATAATGCTGTGAGGGCTTCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCAGCAAGAGCAGCACTaGGATTTGTCTCGGCACAGC +
Preference number: 3 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGQQEQH*DLSRHS
Trigger: GCTGTGCCGAGACAAATCCAAGTGCTGCTCTTGCTG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp TGCTCTATCTTTGACTCCAGCTCAAGTGTGGGCTGGTaGGCATTGGGTGGTCCTGGTGGGGAAAACCCAAGT +
Preference number: 3 (lower is better)
Translates to: CSIFDSSSSVGW*ALGGPGGENPS
Trigger: ACTTGGGTTTTCCCCACCAGGACCACCCAATGCTCACCAGCCCACACTTGAGCTGGAGTCAAAGATAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp CTCCAGGAAGCTGGGAGGTGGAGTACGGTTGCTGGATaGCAAATCGTAGTTCCCTTACTAAGGATCTGGGGC +
Preference number: 3 (lower is better)
Translates to: LQEAGRWSTVAG*QIVVPLLRIWG
Trigger: GCCCCAGATCCTTAGTAAGGGAACTACGATTTGTCATCCAGCAACCGTACTCCACCTCCCAGCTTCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp GGCTTGGATTCAGAGGCATGGACCCATTTCTGCCTCTaGTGTGCTATGTCACCATCGGCAGGTAGGAGGTGT +
Preference number: 3 (lower is better)
Translates to: GLDSEAWTHFCL*CAMSPSAGRRC
Trigger: ACACCTCCTACCTGCCGATGGTGACATAGCACATCAGAGGCAGAAATGGGTCCATGCCTCTGAATCCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 72 bp GGCACAGAGAACATGTCTGTCAACCCTGCCACAGGTTaGTTTTCTAGAGGCCTGGCCTCTACTTCCAGCATG +
Preference number: 3 (lower is better)
Translates to: GTENMSVNPATG*FSRGLASTSSM
Trigger: CATGCTGGAAGTAGAGGCCAGGCCTCTAGAAAAGCAACCTGTGGCAGGGTTGACAGACATGTTCTCTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp AATGCATGTCTCCCAGGCCAGCCTGGAGAGTGGAGCTaGTGCAACATCTGGTCAGCAATAAGCATGAGAGGT +
Preference number: 3 (lower is better)
Translates to: NACLPGQPGEWS*CNIWSAISMRG
Trigger: ACCTCTCATGCTTATTGCTGACCAGATGTTGCAGCAGCTCCACTCTCCAGGCTGGCCTGGGAGACATGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp ATCCCCACTTTTGGCACTGCTGTAAGCACGGACAGCTaGACTTCAGTGCGCACTTCAGCAAGAGCAGCACTT +
Preference number: 3 (lower is better)
Translates to: IPTFGTAVSTDS*TSVRTSARAAL
Trigger: AAGTGCTGCTCTTGCTGAAGTGCGCACTGAAGTCCAGCTGTCCGTGCTTACAGCAGTGCCAAAAGTGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp TCCATGCAGCTCCCAGAGGGCAAGGGAGCCATTAGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: SMQLPEGKGAIS*CVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACACCAACTAATGGCTCCCTTGCCCTCTGGGAGCTGCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp TCTTTGACTCCAGCTCAAGTGTGGGCTGGTGAGCATTaGGTGGTCCTGGTGGGGAAAACCCAAGTCCCTATA +
Preference number: 3 (lower is better)
Translates to: SLTPAQVWAGEH*VVLVGKTQVPI
Trigger: TATAGGGACTTGGGTTTTCCCCACCAGGACCACCCAATGCTCACCAGCCCACACTTGAGCTGGAGTCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp CACTCACACTCTCTGCCCACATCAGGAAGCACTCCTTaGCTACCCCAGTCTGTCACAATTGGAGCAAACACC +
Preference number: 3 (lower is better)
Translates to: HSHSLPTSGSTP*LPQSVTIGANT
Trigger: GGTGTTTGCTCCAATTGTGACAGACTGGGGTAGCCAAGGAGTGCTTCCTGATGTGGGCAGAGAGTGTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp TCTGAAATCTCTATTACCCACCACCATGCTGACTACTaGGGTCAGCCCTTGCCCAACACCCCAGGACAGGAT +
Preference number: 3 (lower is better)
Translates to: SEISITHHHADY*GQPLPNTPGQD
Trigger: ATCCTGTCCTGGGGTGTTGGGCAAGGGCTGACCCCAGTAGTCAGCATGGTGGTGGGTAATAGAGATTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGCCCAGCAAGTCCAGTTaGTCTCACCCCTCTCCAAGA +
Preference number: 3 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTPSKSS*SHPSPR
Trigger: TCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGG...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp TCAGTCTTGGCTTTAAGGAAACTCTGCACTGGTAGATaGGGGGCCTCAGGGCTCACTCACTCACTAGGCACA +
Preference number: 3 (lower is better)
Translates to: SVLALRKLCTGR*GASGLTHSLGT
Trigger: TGTGCCTAGTGAGTGAGTGAGCCCTGAGGCCCCTCATCTACCAGTGCAGAGTTTCCTTAAAGCCAAGACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 72 bp CAGAGGGCGATCTCACACAGCAAACCTGCAGCCTTCTaGGGTCTGGGAAAAGCAGAATGCCTTTGCTTTCTC +
Preference number: 3 (lower is better)
Translates to: QRAISHSKPAAF*GLGKAECLCFL
Trigger: GAGAAAGCAAAGGCATTCTGCTTTTCCCAGACCTCAGAAGGCTGCAGGTTTGCTGTGTGAGATCGCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp GATGGAGAGCAAACAGGCAAGTCTGCTCAGGGGCCTTaGGAGGAAATGTCTCAAAGACGGCCAGTGCTAATG +
Preference number: 3 (lower is better)
Translates to: DGEQTGKSAQGP*EEMSQRRPVLM
Trigger: CATTAGCACTGGCCGTCTTTGAGACATTTCCTCTCAAGGCCCCTGAGCAGACTTGCCTGTTTGCTCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp GATGTTGGGAATGCAGGCCCTTGCAGCCCACCTAGGTaGGGAAAGCTTCTAGCAGTGGTTGATGCAAAAATC +
Preference number: 3 (lower is better)
Translates to: DVGNAGPCSPPR*GKLLAVVDAKI
Trigger: GATTTTTGCATCAACCACTGCTAGAAGCTTTCCCCACCTAGGTGGGCTGCAAGGGCCTGCATTCCCAACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp TATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTaGGGGTCAGGCTGCTTATTTTTGCGGCCCAGTAAC +
Preference number: 3 (lower is better)
Translates to: YPFRAPGVSGPN*GSGCLFLRPSN
Trigger: GTTACTGGGCCGCAAAAATAAGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAATTGGTGACACCACCTaGGGTCAGCTCTGTAATGGG +
Preference number: 3 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIIGDTT*GQLCNG
Trigger: CCCATTACAGAGCTGACCCAAGGTGGTGTCACCAAT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCACCCTGCTGAGGCATaGGTGACACCACCTTGGGTC +
Preference number: 3 (lower is better)
Translates to: PQPIPHPVHLLRANLETHHPAEA*VTPPWV
Trigger: GACCCAAGGTGGTGTCACCAATGCCTCAGCAGGGTG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGAAAGGCATGCGAATCTaGCAGATGATGCAGTACCAG +
Preference number: 3 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQKGMRI*QMMQYQ
Trigger: CTGGTACTGCATCATCTGCAAGATTCGCATGCCTTT...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTCATTCAGTCTTGCTCTaGGCTACTTTAGCCACTGTT +
Preference number: 3 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAHSVLL*ATLATV
Trigger: AACAGTGGCTAAAGTAGCCAAGAGCAAGACTGAATG...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGGTTATTCTTCATGAATaGGCTTCTAGGCAACCCAGT +
Preference number: 3 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRVILHE*ASRQPS
Trigger: ACTGGGTTGCCTAGAAGCCAATTCATGAAGAATAAC...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGCTTATGGCACCGTTTTaGGTCCATGGAATCCCCACT +
Preference number: 3 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRLMAPF*VHGIPT
Trigger: AGTGGGGATTCCATGGACCAAAAACGGTGCCATAAG...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATCTGTGTCCCTGGGGATaGTCTGGTCAGGCTTGCTGT +
Preference number: 3 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHLCPWG*SGQACC
Trigger: ACAGCAAGCCTGACCAGACAATCCCCAGGGACACAG...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp CTCCGGACAACCCAGAGTCAGACAGGATGGCATCACTaGGGACCACTAATGGAATTCTCAGGAATGAATCCC +
Preference number: 3 (lower is better)
Translates to: LRTTQSQTGWHH*GPLMEFSGMNP
Trigger: GGGATTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTCTGGGTTGTCCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp AGGAATCCCCATCAAAACCAAGGCTCAGAGAATGGCTaGGGACACAGTTTGTCAGAGGTGGAACCTGGAGCT +
Preference number: 3 (lower is better)
Translates to: RNPHQNQGSENG*GHSLSEVEPGA
Trigger: AGCTCCAGGTTCCACCTCTGACAAACTGTGTCCTCAGCCATTCTCTGAGCCTTGGTTTTGATGGGGATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 72 bp CAGTGGAAGGAACGCTCATCTCTTAGCGCAAATATGTaGCAAGGGAAGAAGGGGGAGGGTTTCTGTAGACTC +
Preference number: 3 (lower is better)
Translates to: QWKERSSLSANM*QGKKGEGFCRL
Trigger: GAGTCTACAGAAACCCTCCCCCTTCTTCCCTTGGCACATATTTGCGCTAAGAGATGAGCGTTCCTTCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp CACTCAGTCAGTACTGAATCAGTTGTTATGGAGTCCTaGATTAGTGAGACCTGGCCTGGCACACACGGTGAC +
Preference number: 3 (lower is better)
Translates to: HSVSTESVVMES*ISETWPGTHGD
Trigger: GTCACCGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAGTACTGACTGAGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 72 bp TCCCTCACTCCAGGAAGCTGGGAGGTGGAGTACGGTTaGTGGATGACAAATCGTAGTTCCCTTACTAAGGAT +
Preference number: 3 (lower is better)
Translates to: SLTPGSWEVEYG*WMTNRSSLTKD
Trigger: ATCCTTAGTAAGGGAACTACGATTTGTCATCCAGCAACCGTACTCCACCTCCCAGCTTCCTGGAGTGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp CACAAGTGGCTGATAAATCCAAACTTCACTGGCAAGTaGGGACAGAGTGGAGAATCAGGCAGTGGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: HKWLINPNFTGK*GQSGESGSGSR
Trigger: TCTGCTGCCACTGCCTGATTCTCCACTCTGTCCCCACTTGCCAGTGAAGTTTGGATTTATCAGCCACTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp ACACCACCTTGGGTCAGCTCTGTAATGGGCCACAAGTaGCTGATAAATCCAAACTTCACTGGCAAGTGGGGA +
Preference number: 3 (lower is better)
Translates to: TPPWVSSVMGHK*LINPNFTGKWG
Trigger: TCCCCACTTGCCAGTGAAGTTTGGATTTATCAGCCACTTGTGGCCCATTACAGAGCTGACCCAAGGTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp CGCGCGTGCGCGCACATACCTGTACAGAGGTTTATCTaGGATCTCAAGGAAGTCAGTTTGTGTCCAAAAAGC +
Preference number: 3 (lower is better)
Translates to: RACAHIPVQRFI*DLKEVSLCPKS
Trigger: GCTTTTTGGACACAAACTGACTTCCTTGAGATCCCAGATAAACCTCTGTACAGGTATGTGCGCGCACGCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp CTCACTCCAGGAAGCTGGGAGGTGGAGTACGGTTGCTaGATGACAAATCGTAGTTCCCTTACTAAGGATCTG +
Preference number: 3 (lower is better)
Translates to: LTPGSWEVEYGC*MTNRSSLTKDL
Trigger: CAGATCCTTAGTAAGGGAACTACGATTTGTCATCCAGCAACCGTACTCCACCTCCCAGCTTCCTGGAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp GCTCAGAGAATGGCTGAGGACACAGTTTGTCAGAGGTaGAACCTGGAGCTAAATCCAGATTCAGGCAGAGAG +
Preference number: 3 (lower is better)
Translates to: AQRMAEDTVCQR*NLELNPDSGRE
Trigger: CTCTCTGCCTGAATCTGGATTTAGCTCCAGGTTCCACCTCTGACAAACTGTGTCCTCAGCCATTCTCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTAAACTTATTCTGAGTTaGGAAGCAAAAGTGACCCCC +
Preference number: 3 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAKLILS*EAKVTP
Trigger: GGGGGTCACTTTTGCTTCCAAACTCAGAATAAGTTT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGCAAATTCCAGAGTGCTaGCTAGTGGAGAAGAGCAGA +
Preference number: 3 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRQIPEC*LVEKSR
Trigger: TCTGCTCTTCTCCACTAGCAAGCACTCTGGAATTTG...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTAATTCCTTCGCTATTTaGTCATGCTTCAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGNSFAI*SCFKAQ
Trigger: CTGGGCCTTGAAGCATGACAAAATAGCGAAGGAATT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGACACAGACTCAGCAATaGGATTTTTCTTCTTTGGAC +
Preference number: 3 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRTQTQQ*DFSSLD
Trigger: GTCCAAAGAAGAAAAATCCAATTGCTGAGTCTGTGT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp AGGCAAGGAGTTATGTGCACATGTTCTATGCTAAGATaGACCAAACACCAACCTTCAAGGCAAGGCGCGGCC +
Preference number: 3 (lower is better)
Translates to: RQGVMCTCSMLR*TKHQPSRQGAA
Trigger: GGCCGCGCCTTGCCTTGAAGGTTGGTGTTTGGTTCATCTTAGCATAGAACATGTGCACATAACTCCTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 72 bp TCCTGGCTTCCAGTTCTAGCTCAGCCTAGGGGTTGGTaGTTCTTACGTTGTTGTTCCACAGGTTACAGTGAC +
Preference number: 3 (lower is better)
Translates to: SWLPVLAQPRGW*FLRCCSTGYSD
Trigger: GTCACTGTAACCTGTGGAACAACAACGTAAGAATCACCAACCCCTAGGCTGAGCTAGAACTGGAAGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 72 bp TGTATCACTGTGTCAAAGGCATGCGAATCTTGCAGATaGTGCAGTACCAGGCCCTGTCCCCGCTCATATTAC +
Preference number: 3 (lower is better)
Translates to: CITVSKACESCR*CSTRPCPRSYY
Trigger: GTAATATGAGCGGGGACAGGGCCTGGTACTGCATCATCTGCAAGATTCGCATGCCTTTGACACAGTGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp TTTGCTTCCTTTCCCCCAGAAGCCAGTGTGTTGTGCTaGCAACTAGAAGGGAAGTTCTCTAGGCTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: FASFPPEASVLC*QLEGKFSRLFS
Trigger: GGAGAAGAGCCTAGAGAACTTCCCTTCTAGTTGTCAGCACAACACACTGGCTTCTGGGGGAAAGGAAGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp GCTAGACTGTGTCCTTTCATCCTGACAATGACCCTGTaGGGTAGGAATCCCCATCAAAACCAAGGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: ARLCPFILTMTL*GRNPHQNQGSE
Trigger: CTCTGAGCCTTGGTTTTGATGGGGATTCCTACCTCACAGGGTCATTGTCAGGATGAAAGGACACAGTCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 72 bp ACACTGGCTACTGATAGAAGGGAGCTGGCCAATTACTaGTCGGGGAAAACTGCAAATGCTGACAGTTCTGAC +
Preference number: 3 (lower is better)
Translates to: TLATDRRELANY*SGKTANADSSD
Trigger: GTCAGAACTGTCAGCATTTGCAGTTTTCCCCGAGCAGTAATTGGCCAGCTCCCTTCTATCAGTAGCCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp GCTGACATGGTCAGTGGTCTGTGTGCTGCCCTTCAGTaGATAATCAGGCAAGGAGTTATGTGCACATGTTCT +
Preference number: 3 (lower is better)
Translates to: ADMVSGLCAALQ*IIRQGVMCTCS
Trigger: AGAACATGTGCACATAACTCCTTGCCTGATTATGCACTGAAGGGCAGCACACAGACCACTGACCATGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp CATGTCTGCAACCAAACCCTCCCCAGCATGTCAGTGTaGAAGAGTCGCCAAAAGGACAAGCATTTGTCTGTT +
Preference number: 3 (lower is better)
Translates to: HVCNQTLPSMSV*KSRQKDKHLSV
Trigger: AACAGACAAATGCTTGTCCTTTTGGCGACTCTTCCACACTGACATGCTGGGGAGGGTTTGGTTGCAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGATTGGTGACACCACCTaGGGTCAGCTCTGTAATGGG +
Preference number: 3 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVIGDTT*GQLCNG
Trigger: CCCATTACAGAGCTGACCCAAGGTGGTGTCACCAAT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGCACATACTCACAGTTTaGAATAAAACAAGCACAGGT +
Preference number: 3 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRHILTV*NKTSTG
Trigger: ACCTGTGCTTGTTTTATTCAAAACTGTGAGTATGTG...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACATTCAGTCTTGCTCTaGGCTACTTTAGCCACTGTT +
Preference number: 3 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIHSVLL*ATLATV
Trigger: AACAGTGGCTAAAGTAGCCAAGAGCAAGACTGAATG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAATTGTCTGGTCAGGCTaGCTGTTGACCCTTCCTCCT +
Preference number: 3 (lower is better)
Translates to: ESDRMASLRTTNGILRNEIVWSG*LLTLPP
Trigger: AGGAGGAAGGGTCAACAGCAAGCCTGACCAGACAAT...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTTTTGAGCACTTACTATaGCCTGGCAGTGGACTAAAT +
Preference number: 3 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGFEHLL*PGSGLN
Trigger: ATTTAGTCCACTGCCAGGCAATAGTAAGTGCTCAAA...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp TACAGAGTCAGAAGGAGCAATGAGCCACTTAAACACTaGGAGGCAGTCTCTCTAGAAGAGGTCAACCTTCTG +
Preference number: 3 (lower is better)
Translates to: YRVRRSNEPLKH*EAVSLEEVNLL
Trigger: CAGAAGGTTGACCTCTTCTAGAGAGACTGCCTCCCAGTGTTTAAGTGGCTCATTGCTCCTTCTGACTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp GGTTTTGTGGGCAGCCATCCTGTTCACTCATTAGGCTaGAGCGGAATTTTCAATCCTTGTCAACTAGTGAGG +
Preference number: 3 (lower is better)
Translates to: GFVGSHPVHSLG*SGIFNPCQLVR
Trigger: CCTCACTAGTTGACAAGGATTGAAAATTCCGCTCCAGCCTAATGAGTGAACAGGATGGCTGCCCACAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp ATTGGAGCAAACACCCATAGGCCTGGGCCTATCCGCTaGCACAAAAACAAGCCAATAGACAAAGACTCGTAT +
Preference number: 3 (lower is better)
Translates to: IGANTHRPGPIR*HKNKPIDKDSY
Trigger: ATACGAGTCTTTGTCTATTGGCTTGTTTTTGTGCCAGCGGATAGGCCCAGGCCTATGGGTGTTTGCTCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCACCCTGCTGAGGCATaGGTGACACCACCTTGGGTC +
Preference number: 3 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSHPAEA*VTPPWV
Trigger: GACCCAAGGTGGTGTCACCAATGCCTCAGCAGGGTG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATTGGTGATTCTTACGTaGTTGTTCCACAGGTTACAG +
Preference number: 3 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFILVILT*LFHRLQ
Trigger: CTGTAACCTGTGGAACAACAACGTAAGAATCACCAA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTATTCATAACTCAAAATaGAGACGCTTAGTAGGACCC +
Preference number: 3 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGIHNSK*RRLVGP
Trigger: GGGTCCTACTAAGCGTCTCAATTTTGAGTTATGAAT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCAGCAAGAGCAGCACTaGGATTTGTCTCGGCACAGC +
Preference number: 3 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHQQEQH*DLSRHS
Trigger: GCTGTGCCGAGACAAATCCAAGTGCTGCTCTTGCTG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATCTCCCAGTGGAGCTTTaGTTACACTTCAGCCTTCGT +
Preference number: 3 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHLPVEL*LHFSLR
Trigger: ACGAAGGCTGAAGTGTAACAAAAGCTCCACTGGGAG...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCTCAAGGAAGTCAGTTaGTGTCCAAAAAGCCTATTT +
Preference number: 3 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGLKEVS*CPKSLF
Trigger: AAATAGGCTTTTTGGACACAAACTGACTTCCTTGAG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTAGGAGGCAAGACTCTTaGTGGGCTAACCAGCCTTCT +
Preference number: 3 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSRRQDS*WANQPS
Trigger: AGAAGGCTGGTTAGCCCACAAAGAGTCTTGCCTCCT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTTGCGATGGCGTGATCTaGGCTCACTGCAACCTTTGC +
Preference number: 3 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGCDGVI*AHCNLC
Trigger: GCAAAGGTTGCAGTGAGCCAAGATCACGCCATCGCA...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGAGCAGCACTTGGATTaGTCTCGGCACAGCACTTTG +
Preference number: 3 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHEQHLD*SRHSTL
Trigger: CAAAGTGCTGTGCCGAGACAAATCCAAGTGCTGCTC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATATAATGCGGCAGTTGTaGCTACCACTGCTGACTCTT +
Preference number: 3 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHIMRQL*LPLLTL
Trigger: AAGAGTCAGCAGTGGTAGCAACAACTGCCGCATTAT...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTATCAGGAAGCACTCCTaGGCTACCCCAGTCTGTCAC +
Preference number: 3 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGIRKHS*ATPVCH
Trigger: GTGACAGACTGGGGTAGCCAAGGAGTGCTTCCTGAT...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR TCA 72 bp CCTCACCTCAACCCATACCTCACCCAGTTCATCTTCTaGGGGCAAATCTTGAAACTCATTGCCATATTCCTG +
Preference number: 3 (lower is better)
Translates to: PHLNPYLTQFIF*GQILKLIAIFL
Trigger: CAGGAATATGGCAATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 72 bp GGCAGGAAAGAAATCAAGATTCTCTGTGGCTTAGGTTaGAAGACAACACTCTGCAGGCATGGAGCTGCCAAA +
Preference number: 3 (lower is better)
Translates to: GRKEIKILCGLG*KTTLCRHGAAK
Trigger: TTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGAATCTTGATTTCTTTCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCAAGTGTCACAGAGATaGTTCATGCTCATGTGGCTT +
Preference number: 3 (lower is better)
Translates to: PQPIPHPVHLLRANLETHQVSQR*FMLMWL
Trigger: AAGCCACATGAGCATGAACAATCTCTGTGACACTTG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCCCAGCAAGTCCAGTTaGTCTCACCCCTCTCCAAGA +
Preference number: 3 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSPSKSS*SHPSPR
Trigger: TCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGAGCAGCACTTGGATTaGTCTCGGCACAGCACTTTG +
Preference number: 3 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGEQHLD*SRHSTL
Trigger: CAAAGTGCTGTGCCGAGACAAATCCAAGTGCTGCTC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 72 bp ATCTTCCGCTCTCAGTATTATATGATGTTCTCAAGCTaGGGTTTGGGCAATAGCCACAGTCATGTCAAGGGG +
Preference number: 3 (lower is better)
Translates to: IFRSQYYMMFSS*GLGNSHSHVKG
Trigger: CCCCTTGACATGACTGTGGCTATTGCCCAAACCTCAGCTTGAGAACATCATATAATACTGAGAGCGGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 72 bp CATCCGGCCAACTTCTTTCAATCTATAACTAAGGTCTaGGTCTTGAAGACCTTCCTCTGGAGCCTCAGTAAG +
Preference number: 3 (lower is better)
Translates to: HPANFFQSITKV*VLKTFLWSLSK
Trigger: CTTACTGAGGCTCCAGAGGAAGGTCTTCAAGACTCAGACCTTAGTTATAGATTGAAAGAAGTTGGCCGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 72 bp AGCAAAGTACCACAGCAAACCAAAGGGTGGCACCACTaGTGGCAGAGAGGACCTTTCAATGATAGATTTATA +
Preference number: 3 (lower is better)
Translates to: SKVPQQTKGWHH*WQRGPFNDRFI
Trigger: TATAAATCTATCATTGAAAGGTCCTCTCTGCCAGCAGTGGTGCCACCCTTTGGTTTGCTGTGGTACTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp ATAAACCTCAAGTCTGGCAGCCACTCTTCTGGGGTATaGCTTAAAAACAGCATCTGCAAATTCCAGAGTGCT +
Preference number: 3 (lower is better)
Translates to: INLKSGSHSSGV*LKNSICKFQSA
Trigger: AGCACTCTGGAATTTGCAGATGCTGTTTTTAAGGCATACCCCAGAAGAGTGGCTGCCAGACTTGAGGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 72 bp ACAGGTCCTGTTAAGAATTCCTTCGCTATTTTGTCATaGTTCAAGGCCCAGGAAAGGTCTAGGCAAAACTCC +
Preference number: 3 (lower is better)
Translates to: TGPVKNSFAILS*FKAQERSRQNS
Trigger: GGAGTTTTGCCTAGACCTTTCCTGGGCCTTGAAGCATGACAAAATAGCGAAGGAATTCTTAACAGGACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp AAGAGCAGCACTTGGATTTGTCTCGGCACAGCACTTTaGGCCTTTGAGAATATGAGCTTCGATGACATAAAG +
Preference number: 3 (lower is better)
Translates to: KSSTWICLGTAL*AFENMSFDDIK
Trigger: CTTTATGTCATCGAAGCTCATATTCTCAAAGGCCCAAAGTGCTGTGCCGAGACAAATCCAAGTGCTGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp CAAAAACAAGCCAATAGACAAAGACTCGTATGGTGGTaGGGAGAACTGGCTTCAAGCCTAGGTTTGAATCTC +
Preference number: 3 (lower is better)
Translates to: QKQANRQRLVWW*GELASSLGLNL
Trigger: GAGATTCAAACCTAGGCTTGAAGCCAGTTCTCCCCACCACCATACGAGTCTTTGTCTATTGGCTTGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTACTGCACAGTCAGTCTaGGCTTTAAGGAAACTCTGC +
Preference number: 3 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSTAQSV*ALRKLC
Trigger: GCAGAGTTTCCTTAAAGCCAAGACTGACTGTGCAGT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAGGAGGCAAGACTCTTaGTGGGCTAACCAGCCTTCT +
Preference number: 3 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSRRQDS*WANQPS
Trigger: AGAAGGCTGGTTAGCCCACAAAGAGTCTTGCCTCCT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCGGCTGTATAGCACCTaGTACCTTCTGGGCACTTAC +
Preference number: 3 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSRLYST*YLLGTY
Trigger: GTAAGTGCCCAGAAGGTACAAGGTGCTATACAGCCG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 72 bp CCAGAATTATGGAGGAAATGGACACAGCTCACTGGCTaGGTTCATACCAAAGAAGCTGTCCCTTCAAGAATA +
Preference number: 3 (lower is better)
Translates to: PELWRKWTQLTG*VHTKEAVPSRI
Trigger: TATTCTTGAAGGGACAGCTTCTTTGGTATGAACTCAGCCAGTGAGCTGTGTCCATTTCCTCCATAATTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 72 bp TCACTGTGCCCTCTAAAGGAGATCTTAGAGCTCCACTaGCAGCTATTTCATTCAGGGCAATTGTTTACAGCA +
Preference number: 3 (lower is better)
Translates to: SLCPLKEILELH*QLFHSGQLFTA
Trigger: TGCTGTAAACAATTGCCCTGAATGAAATAGCTGTCAGTGGAGCTCTAAGATCTCCTTTAGAGGGCACAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 72 bp CCCCTTTCCATCCAATTCAATTGCACCAACATTGACTaGACTGTATACCCTGTCACCAGCATGGAGTATAAG +
Preference number: 3 (lower is better)
Translates to: PLSIQFNCTNID*TVYPVTSMEYK
Trigger: CTTATACTCCATGCTGGTGACAGGGTATACAGTTCAGTCAATGTTGGTGCAATTGAATTGGATGGAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 72 bp ACCACGAACATGACATTGAGAAGGTATATCTCAATATaGAAGACATTGCAAGATGGGAGGTGGGGGAGGTTA +
Preference number: 3 (lower is better)
Translates to: TTNMTLRRYISI*KTLQDGRWGRL
Trigger: TAACCTCCCCCACCTCCCATCTTGCAATGTCTTGCATATTGAGATATACCTTCTCAATGTCATGTTCGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp GTTTCTCTAGCACCCAAGTGTCACAGAGATTGTTCATaGTCATGTGGCTTAAGGAAAAGTTCCAATAGGAGC +
Preference number: 3 (lower is better)
Translates to: VSLAPKCHRDCS*SCGLRKSSNRS
Trigger: GCTCCTATTGGAACTTTTCCTTAAGCCACATGAGCATGAACAATCTCTGTGACACTTGGGTGCTAGAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp GATTTCTTTGGTATAATCTCTCCCAGGATCTTGCACTaGAACTCTTCTGGCTTCCCTTATGGCACCGTTTTT +
Preference number: 3 (lower is better)
Translates to: DFFGIISPRILH*NSSGFPYGTVF
Trigger: AAAAACGGTGCCATAAGGGAAGCCAGAAGAGTTGCAGTGCAAGATCCTGGGAGAGATTATACCAAAGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp ATCTTGCTTCTGTATTTGCCTCATGCCAAAATGCCCTaGATATCCTCAACAGAAAATCCCAACCCAGTGTGT +
Preference number: 3 (lower is better)
Translates to: ILLLYLPHAKMP*ISSTENPNPVC
Trigger: ACACACTGGGTTGGGATTTTCTGTTGAGGATATGCAGGGCATTTTGGCATGAGGCAAATACAGAAGCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp ATATCCAGAATTATGGAGGAAATGGACACAGCTCACTaGCTGAGTTCATACCAAAGAAGCTGTCCCTTCAAG +
Preference number: 3 (lower is better)
Translates to: ISRIMEEMDTAH*LSSYQRSCPFK
Trigger: CTTGAAGGGACAGCTTCTTTGGTATGAACTCAGCCAGTGAGCTGTGTCCATTTCCTCCATAATTCTGGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp GTCTGTTGTCAGAGTCTACTGGGTCGTGGTAGAGACTaGTTAAGTCTGTCTACTGCTAGTGAGAATAAATAC +
Preference number: 3 (lower is better)
Translates to: VCCQSLLGRGRD*LSLSTASENKY
Trigger: GTATTTATTCTCACTAGCAGTAGACAGACTTAACCAGTCTCTACCACGACCCAGTAGACTCTGACAACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp AAAGTACCACAGCAAACCAAAGGGTGGCACCACTGCTaGCAGAGAGGACCTTTCAATGATAGATTTATACAA +
Preference number: 3 (lower is better)
Translates to: KVPQQTKGWHHC*QRGPFNDRFIQ
Trigger: TTGTATAAATCTATCATTGAAAGGTCCTCTCTGCCAGCAGTGGTGCCACCCTTTGGTTTGCTGTGGTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CCA 72 bp AATTTAATCACTCAGTCAGTACTGAATCAGTTGTTATaGAGTCCTGCATTAGTGAGACCTGGCCTGGCACAC +
Preference number: 3 (lower is better)
Translates to: NLITQSVLNQLL*SPALVRPGLAH
Trigger: GTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAGTACTGACTGAGTGATTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGATATGAAGAGGTGCTaGGTTTACCAGTGCTGTAAG +
Preference number: 3 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSDMKRC*VYQCCK
Trigger: CTTACAGCACTGGTAAACCAAGCACCTCTTCATATC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGATATGAAGAGGTGCTaGGTTTACCAGTGCTGTAAG +
Preference number: 3 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHDMKRC*VYQCCK
Trigger: CTTACAGCACTGGTAAACCAAGCACCTCTTCATATC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp CTTTTCTATGCTAAAGTTCCTCTGCATTCACCAGAATaGAGTAGGCTACTTAAGCCAAAGATCCAGGGCTAT +
Preference number: 3 (lower is better)
Translates to: LFYAKVPLHSPE*SRLLKPKIQGY
Trigger: ATAGCCCTGGATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCATAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
3UTR-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTCTATCTCACATTCTTaGGCCATCACCCAGAGAAAA +
Preference number: 3 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSSISHS*AITQRK
Trigger: TTTTCTCTGGGTGATGGCCAAAGAATGTGAGATAGA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCAAGTGTCACAGAGATaGTTCATGCTCATGTGGCTT +
Preference number: 3 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGQVSQR*FMLMWL
Trigger: AAGCCACATGAGCATGAACAATCTCTGTGACACTTG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 72 bp AAAACATCTGATATGAAGAGGTGCTTGGTTTACCAGTaGTGTAAGATAATGGTAGTGGAGGTGTCCATGCTT +
Preference number: 3 (lower is better)
Translates to: KTSDMKRCLVYQ*CKIMVVEVSML
Trigger: AAGCATGGACACCTCCACTACCATTATCTTACAGCACTGGTAAACCAAGCACCTCTTCATATCAGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp AACCCTACAGCTATATGCGTATGTCTTGTATATATTTaGTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTT +
Preference number: 3 (lower is better)
Translates to: NPTAICVCLVYI*SSMELLGVEDF
Trigger: AAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCTGTAGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CCA 72 bp GAGAATATGAGCTTCGATGACATAAAGCTAATAACTTaGTTTTGTGGGCAGCCATCCTGTTCACTCATTAGG +
Preference number: 3 (lower is better)
Translates to: ENMSFDDIKLIT*FCGQPSCSLIR
Trigger: CCTAATGAGTGAACAGGATGGCTGCCCACAAAACCAAGTTATTAGCTTTATGTCATCGAAGCTCATATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTCGCTTCAGGTGAAGTaGCAACATAAACACTGTAAT +
Preference number: 3 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSSLQVK*QHKHCN
Trigger: ATTACAGTGTTTATGTTGCAACTTCACCTGAAGCGA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTTTTCTCTGGCTAGTTaGCATTCATCTTTTGCCCTT +
Preference number: 3 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSFSLAS*HSSFAL
Trigger: AAGGGCAAAAGATGAATGCAAACTAGCCAGAGAAAA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATCTATCTCACATTCTTaGGCCATCACCCAGAGAAAA +
Preference number: 3 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGSISHS*AITQRK
Trigger: TTTTCTCTGGGTGATGGCCAAAGAATGTGAGATAGA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATTGGTGATTCTTACGTaGTTGTTCCACAGGTTACAG +
Preference number: 3 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGLVILT*LFHRLQ
Trigger: CTGTAACCTGTGGAACAACAACGTAAGAATCACCAA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCGGAATTTTCAATCCTaGTCAACTAGTGAGGAGAAT +
Preference number: 3 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHRNFQS*STSEEN
Trigger: ATTCTCCTCACTAGTTGACAAGGATTGAAAATTCCG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACATAAAGCTAATAACTaGGTTTTGTGGGCAGCCATC +
Preference number: 3 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGHKANN*VLWAAI
Trigger: GATGGCTGCCCACAAAACCAAGTTATTAGCTTTATG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTACCACGAACATGACATaGAGAAGGTATATCTCAATA +
Preference number: 3 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSTTNMT*RRYISI
Trigger: TATTGAGATATACCTTCTCAATGTCATGTTCGTGGT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 72 bp CCTAGAGAACTGATTTGGGTATGCAATCTGTCTAGCTaGACTGAATATTATACTACTGGGTCTCAGTCTCAA +
Preference number: 3 (lower is better)
Translates to: PRELIWVCNLSS*TEYYTTGSQSQ
Trigger: TTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGATTGCATACCCAAATCAGTTCTCTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
3UTR GCA 72 bp AAATCACCAAGTAGAATGAAATCTTGCTTCTGTATTTaGCTCATGCCAAAATGCCCTGCATATCCTCAACAG +
Preference number: 3 (lower is better)
Translates to: KSPSRMKSCFCI*LMPKCPAYPQQ
Trigger: CTGTTGAGGATATGCAGGGCATTTTGGCATGAGGCAAATACAGAAGCAAGATTTCATTCTACTTGGTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp AATTCAGCCAGGAGATATTTGGAAAGCTGGAGAAATTaGCACTCAAAAGCTGCAAGCAGTTTTCTGATTCTT +
Preference number: 3 (lower is better)
Translates to: NSARRYLESWRN*HSKAASSFLIL
Trigger: AAGAATCAGAAAACTGCTTGCAGCTTTTGAGTGGCAATTTCTCCAGCTTTCCAAATATCTCCTGGCTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR GCA 72 bp GTGTTATGGATTTGCTTTTCTATGCTAAAGTTCCTCTaGATTCACCAGAATGCAGTAGGCTACTTAAGCCAA +
Preference number: 3 (lower is better)
Translates to: VLWICFSMLKFL*IHQNAVGYLSQ
Trigger: TTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCATAGAAAAGCAAATCCATAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
3UTR TCA 72 bp AATGAGGACTGTCATGATTCAAATCACCAAGTAGAATaGAATCTTGCTTCTGTATTTGCCTCATGCCAAAAT +
Preference number: 3 (lower is better)
Translates to: NEDCHDSNHQVE*NLASVFASCQN
Trigger: ATTTTGGCATGAGGCAAATACAGAAGCAAGATTTCATTCTACTTGGTGATTTGAATCATGACAGTCCTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR TCA 72 bp AAGTTCCTGAAACAGTGTGGTTTAACCTTTCAAAAATaGACCCTATGTCTGGTTCAACATTCAAGTTATCAT +
Preference number: 3 (lower is better)
Translates to: KFLKQCGLTFQK*TLCLVQHSSYH
Trigger: ATGATAACTTGAATGTTGAACCAGACATAGGGTTCATTTTTGAAAGGTTAAACCACACTGTTTCAGGAACTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR GCA 72 bp ATAAAAACAGTACTAAAAACATCTGATATGAAGAGGTaGTTGGTTTACCAGTGCTGTAAGATAATGGTAGTG +
Preference number: 3 (lower is better)
Translates to: IKTVLKTSDMKR*LVYQCCKIMVV
Trigger: CACTACCATTATCTTACAGCACTGGTAAACCAAGCACCTCTTCATATCAGATGTTTTTAGTACTGTTTTTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGAGGGAGGGAGGGGGTaGTTCGGGACACAGACACCC +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSEGGRG*FGTQTP
Trigger: GGGTGTCTGTGTCCCGAAGCACCCCCTCCCTCCCTC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCAGCAGGCTACACAGCTaGAGCAGGCAGGGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSSRLHS*SRQGLC
Trigger: ACACAGGCCCTGCCTGCTGCAGCTGTGTAGCCTGCT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCGGGGGAAAGGGAGCTaGTGGCTCACTTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRRGKGS*WLTLGA
Trigger: AGCCCCCAAAGTGAGCCACCAGCTCCCTTTCCCCCG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGGGGGCAAGGCGAGACTaGTCCCGGAGGATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQGARRD*SRRISG
Trigger: CCCCGAGATCCTCCGGGACCAGTCTCGCCTTGCCCC...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGTAGGGGGAGCGGAATaGGATGCGAGGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRVGGAE*DARQVC
Trigger: GCAGACCTGCCTCGCATCCCATTCCGCTCCCCCTAC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCTCTGCACTGGTAGATaGGGGGCCTCAGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRLCTGR*GASGLT
Trigger: AGTGAGCCCTGAGGCCCCTCATCTACCAGTGCAGAG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTGGGAAGCTACAGATCTaGCTGCTCAGCCTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFGKLQI*LLSLAS
Trigger: GCTGGCTAGGCTGAGCAGTCAGATCTGTAGCTTCCC...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTCAAGCTCAGAATAGCTaGAGGACCCTGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFQAQNS*RTLGRR
Trigger: CCTCCTCCCCAGGGTCCTTCAGCTATTCTGAGCTTG...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGGCTCCGAGGAAGGGTaGGGGCCTGGGCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLGSEEG*GPGPAP
Trigger: AGGGGCTGGCCCAGGCCCTCACCCTTCCTCGGAGCC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTGGCTCTCTGGATCTTTaGTGGGGAGCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFGSLDL*WGAVAG
Trigger: TCCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCC...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCTCTGGTGCTGCTGCTaGCCACCATCTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSLWCCC*PPSETP
Trigger: AGGAGTCTCAGATGGTGGGCAGCAGCAGCACCAGAG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCAGCTGCCCGCCTGCTaGCTTCAGAGTGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSQLPAC*LQSAKL
Trigger: CAGTTTTGCACTCTGAAGGCAGCAGGCGGGCAGCTG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTTCCCTCCAAAGGCGATaGCATCGTCCACAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFSLQRR*HRPQLP
Trigger: AGGGAGCTGTGGACGATGCCATCGCCTTTGGAGGGA...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTCCGCTCAGAAGGGTTaGGATTCAGGAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSSAQKG*DSGGSW
Trigger: CCAGCTGCCTCCTGAATCCCAACCCTTCTGAGCGGA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTGGCTCCAGGTGTTTCTaGACCAAACTGGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFGSRCF*TKLGVR
Trigger: CCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCC...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTGGGCTGGTGAGCATTaGGTGGTCCTGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSWAGEH*VVLVGK
Trigger: TTTCCCCACCAGGACCACCCAATGCTCACCAGCCCA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCAGCGCTTAGGTTTTaGATCAGCTGCCCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRPALRF*ISCPPA
Trigger: AGCAGGCGGGCAGCTGATGCAAAACCTAAGCGCTGG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTCTCCCAGGCTGGAGTaGGATGGCGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRSPRLE*DGVILA
Trigger: AGCCAAGATCACGCCATCGCACTCCAGCCTGGGAGA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCCCCACTTTTGGCACTaGTGTAAGCACGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSPHFWH*CKHGQL
Trigger: CAGCTGTCCGTGCTTACAGCAGTGCCAAAAGTGGGG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCGTGTGTGTGCGCGCGTaGGCGCACATACCTGTACAG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVVCVRA*AHIPVQ
Trigger: CTGTACAGGTATGTGCGCGCACGCGCGCACACACAC...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTACTGGGGTCAGCCCTTaGCCAACACCCCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAATGVSP*PTPQDR
Trigger: CCTGTCCTGGGGTGTTGGGCAAGGGCTGACCCCAGT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTTCCCTGGGGATTGTCTaGTCAGGCTTGCTGTTGACC +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFSLGIV*SGLLLT
Trigger: GGTCAACAGCAAGCCTGACCAGACAATCCCCAGGGA...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCCCATCCCCCAACCCTaGGCAAAGATGAACCATAGG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSPIPQP*AKMNHR
Trigger: CCTATGGTTCATCTTTGCCCAGGGTTGGGGGATGGG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGGGAGGAGGCAGCATGTaGATGACTGTGCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRGGGSM*MTVPSR
Trigger: CCTGGATGGCACAGTCATTCACATGCTGCCTCCTCC...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTTGTCACTGGTTAGCCTaGAGTCTGACCAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFCHWLA*SLTSCP
Trigger: TGGACAGCTGGTCAGACTTCAGGCTAACCAGTGACA...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCAGGCTGCACACATGGTaGACAGCTCTCAATCACCCA +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSRLHTW*TALNHP
Trigger: TGGGTGATTGAGAGCTGTTCACCATGTGTGCAGCCT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTGTCTCTGGGAAGCCTaGGGCTTTTCTCTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSCLWEA*GFSLAS
Trigger: ACTAGCCAGAGAAAAGCCTCAGGCTTCCCAGAGACA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGAGTTCAGTGAAGGTCTaGCAGGGAAAGGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRSSVKV*QGKVLA
Trigger: GGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACT...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGAACCCTGATTTACCATaGCAGGGTGGGAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRNPDLP*QGGSGG
Trigger: CCCTCCACTCCCACCCTGTCATGGTAAATCAGGGTT...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTGTTTACCACTGTGCCTaGCTCTCCCCCAATAAAGGG +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFVYHCA*LSPNKG
Trigger: CCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAAC...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCGGCTCTCTGGATCTTTaGTGGGGAGCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVGSLDL*WGAVAG
Trigger: TCCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCC...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGACCCTTCTCCATGACTaGTGCCTGGTCTGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRTLLHD*CLVCPS
Trigger: GCTAGGACAGACCAGGCAGCAGTCATGGAGAAGGGT...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCGGAGCTGGTCTTTCTaGCCAGCCATGAAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSRSWSF*PAMKRS
Trigger: AGACCTTTTCATGGCTGGGCAGAAAGACCAGCTCCG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTCCCAGGATCTTGCACTaGAACTCTTCTGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFPRILH*NSSGFP
Trigger: AGGGAAGCCAGAAGAGTTGCAGTGCAAGATCCTGGG...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCTGGAGAGTGGAGCTaGTGCAACATCTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRPGEWS*CNIWSA
Trigger: TGCTGACCAGATGTTGCAGCAGCTCCACTCTCCAGG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCGCCACTGGAAAACTCTaGGTAACAGAACCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVATGKL*VTEPAP
Trigger: GGGGGCCGGTTCTGTTACCCAGAGTTTTCCAGTGGC...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGGGTGCTCACTGGCCATaGCTGCTGACACATCCACGA +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRGAHWP*LLTHPR
Trigger: TCGTGGATGTGTCAGCAGCCATGGCCAGTGAGCACC...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTGGGAGAGGGGGTGACTaGCTTTATGGATGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFGRGGD*LYGWVF
Trigger: AAAGACCCATCCATAAAGCCAGTCACCCCCTCTCCC...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCTGGTAGGGCTGGTTaGCTTGGTCCAGTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRPGRAG*LGPVGE
Trigger: TTCACCAACTGGACCAAGCCAACCAGCCCTACCAGG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTCCATGACTGCTGCCTaGTCTGTCCTAGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRSMTAA*SVLALL
Trigger: GAGCAAGGCTAGGACAGACCAGGCAGCAGTCATGGA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGGGGGTGGTGTAGGTTaGGAAGCATTGGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRGGGVG*EALGAS
Trigger: AGAAGCACCCAATGCTTCCCAACCTACACCACCCCC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCACTCCAAAACGGAGCTaGTCTTTCTGCCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSTPKRS*SFCPAM
Trigger: CATGGCTGGGCAGAAAGACCAGCTCCGTTTTGGAGT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCAGGCGGTGAAAGTCTaGAAGAGATCTTCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVQAVKV*KRSSRG
Trigger: CCCCCGCGAAGATCTCTTCCAGACTTTCACCGCCTG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCAGAGCCCTGCACTCTaGCTAGAGGAGGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVQSPAL*LEEARL
Trigger: GAGTCTTGCCTCCTCTAGCCAGAGTGCAGGGCTCTG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCCAAGAGCAGACTGCTaGCCTGCAGCAGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQPRADC*PAAACP
Trigger: TGGGCATGCTGCTGCAGGCCAGCAGTCTGCTCTTGG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGTAAGCACGGACAGCTaGACTTCAGTGCGCACTTCA +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSVSTDS*TSVRTS
Trigger: TGAAGTGCGCACTGAAGTCCAGCTGTCCGTGCTTAC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGGGTGGCACCACTGCTaGCAGAGAGGACCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRGWHHC*QRGPFN
Trigger: ATTGAAAGGTCCTCTCTGCCAGCAGTGGTGCCACCC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCCCAGCATGTCAGTGTaGAAGAGTCGCCAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSPSMSV*KSRQKD
Trigger: GTCCTTTTGGCGACTCTTCCACACTGACATGCTGGG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCTCTGTGGTGAAGACTaGCCTCTGTTGAGACAGTTG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSLCGED*PLLRQL
Trigger: CAACTGTCTCAACAGAGGTCAGTCTTCACCACAGAG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGTGCTCTGATCCACACTaGGCTGGCCTTGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQCSDPH*AGLEQG
Trigger: ACCCTGCTCAAGGCCAGCTCAGTGTGGATCAGAGCA...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCAATCAGAATTCCTGTaGGCTGTCCTCCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSQSEFL*AVLQSH
Trigger: ATGGCTCTGGAGGACAGCTCACAGGAATTCTGATTG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCAGGGAATGTGCTGGCTaGCATGGTCAGTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVRECAG*HGQWSV
Trigger: CACAGACCACTGACCATGTCAGCCAGCACATTCCCT...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAACTCCTGACCTCAGGTaGTCTGCCCACCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFITPDLR*SAHLAL
Trigger: GAGGGCGAGGTGGGCAGATCACCTGAGGTCAGGAGT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGGGTCAGGCTTGCTGTTaGCCCTTCCTCCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRGQACC*PFLLGP
Trigger: TGGGCCCAGGAGGAAGGGTCAACAGCAAGCCTGACC...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGCCAGTGTGTTGTGCTaGCAACTAGAAGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSASVLC*QLEGKF
Trigger: GAACTTCCCTTCTAGTTGTCAGCACAACACACTGGC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTCTCTGTGGCTTAGGTTaGAAGACAACACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFLCGLG*KTTLCR
Trigger: CCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAG...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGGCCATGGGTGATGGGTaGCTTCTCAGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRAMGDG*LLRVWG
Trigger: CCCCCAGACCCTGAGAAGGCACCCATCACCCATGGC...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAACAGGGCCCTCGAGGTaGTCACTGGCCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFITGPSR*SLAMAA
Trigger: AGCAGCCATGGCCAGTGAGCACCTCGAGGGCCCTGT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTTGGGCTGTCGTGGCTaGTTGGGAGGTATCATGGCT +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRLGCRG*LGGIMA
Trigger: AGCCATGATACCTCCCAAGCAGCCACGACAGCCCAA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAATGCCTCGGCCCTGTCTaGAAGAGGGCCCACGCCGGC +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNECLGPV*KRAHAG
Trigger: GCCGGCGTGGGCCCTCTTGCAGACAGGGCCGAGGCA...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGAGGTTAAGGGAATGTaGTGGCTGACATGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSEVKGM*WLTWSV
Trigger: CACTGACCATGTCAGCCAGCACATTCCCTTAACCTC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGGGGAATGCAGGCCCTTaGAGCCCACCTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRGNAGP*SPPRWG
Trigger: TCCCCACCTAGGTGGGCTGCAAGGGCCTGCATTCCC...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCTCACACAGCAAACCTaGAGCCTTCTGAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVLTQQT*SLLRSG
Trigger: CCCAGACCTCAGAAGGCTGCAGGTTTGCTGTGTGAG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCCAAGCCTCTCAACATaGAGTACAAACCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSPSLST*STNPGS
Trigger: GCTTCCTGGGTTTGTACTGCATGTTGAGAGGCTTGG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCAGATTGAGGTGTTTCTaGAGGAGACTGTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSRLRCF*RRLWGL
Trigger: CAACCCCCACAGTCTCCTCCAGAAACACCTCAATCT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTGCTGGTGGCTCACTTTaGGGGCTAGTCACTAATTTG +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFAGGSL*GLVTNL
Trigger: CAAATTAGTGACTAGCCCCCAAAGTGAGCCACCAGC...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGCGGGGGAAAGGGAGCTaGTGGCTCACTTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTRGKGS*WLTLGA
Trigger: AGCCCCCAAAGTGAGCCACCAGCTCCCTTTCCCCCG...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTCCTGGTAACCAAAACTaGGCTGATGCTAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFPGNQN*ADAKDG
Trigger: GCCATCCTTAGCATCAGCCCAGTTTTGGTTACCAGG...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCTGATAGAAGGGAGCTaGCCAATTACTGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRLIEGS*PITARG
Trigger: TCCCCGAGCAGTAATTGGCCAGCTCCCTTCTATCAG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCAGCATGCCCACTCCATaGCCATTCCTAGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVSMPTP*PFLGAE
Trigger: CTCTGCTCCTAGGAATGGCCATGGAGTGGGCATGCT...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCACTGCGCCTGGCCTaGGAACTTCATACTACTAGA +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRPLRLA*ELHTTR
Trigger: TCTAGTAGTATGAAGTTCCCAGGCCAGGCGCAGTGG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCAAAACATGCCAGGGTTaGCCCAGCAAGTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSKTCQG*PSKSSL
Trigger: CAAACTGGACTTGCTGGGCCAACCCTGGCATGTTTT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTGCAGCCCACCTAGGTaGGGAAAGCTTCTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVCSPPR*GKLLAV
Trigger: CACTGCTAGAAGCTTTCCCCACCTAGGTGGGCTGCA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTTGGGCAATCCTGAACTaGTCCCACCATCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAWAILN*SHHPLA
Trigger: GGCCAGTGGATGGTGGGACCAGTTCAGGATTGCCCA...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGCCATCCAACTGTCAGTaGCCCATCACCTCCGGACAA +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRPSNCQ*PITSGQ
Trigger: TTGTCCGGAGGTGATGGGCCACTGACAGTTGGATGG...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTGCCTTGTGTTGGCCTaGCGATCCCATAGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRCLVLA*RSHRSS
Trigger: TGAACTCCTATGGGATCGCCAGGCCAACACAAGGCA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTCTCTGTGGCAGCTGTTaGCCACTTAGTTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFLCGSC*PLSCLC
Trigger: ACAAAGGCAACTAAGTGGCCAACAGCTGCCACAGAG...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 72 bp GCCCCTGTGTATCACTGTGTCAAAGGCATGCGAATCTaGCAGATGATGCAGTACCAGGCCCTGTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: APVYHCVKGMRI*QMMQYQALSPL
Trigger: GAGCGGGGACAGGGCCTGGTACTGCATCATCTGCAAGATTCGCATGCCTTTGACACAGTGATACACAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 72 bp CAGGAAGCACTCCTTGGCTACCCCAGTCTGTCACAATaGGAGCAAACACCCATAGGCCTGGGCCTATCCGCT +
Preference number: 4 (lower is better)
Translates to: QEALLGYPSLSQ*EQTPIGLGLSA
Trigger: AGCGGATAGGCCCAGGCCTATGGGTGTTTGCTCCAATTGTGACAGACTGGGGTAGCCAAGGAGTGCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGTTTGGAGTAGAGGATaGGCTTTTTGTCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSVWSRG*AFCLGA
Trigger: AGCCCCAAGACAAAAAGCTCATCCTCTACTCCAAAC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCTGTGGGGGTTGGATTaGAGCCACAATCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRLWGLD*SHNLRK
Trigger: CTTTCTCAGATTGTGGCTTCAATCCAACCCCCACAG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTGTCACTGGTTAGCCTaGAGTCTGACCAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVCHWLA*SLTSCP
Trigger: TGGACAGCTGGTCAGACTTCAGGCTAACCAGTGACA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGGGGAAGTGCATGGGTaGCATGAAGAAGGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRGEVHG*HEEGED
Trigger: ATCTTCACCTTCTTCATGTCACCCATGCACTTCCCC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCAGCCTTCTTTCCTGTaGGTCCTATATTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRQPSFL*VLYCWP
Trigger: TGGCCAGCAATATAGGACTCACAGGAAAGAAGGCTG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTGTCTCTGGGAAGCCTaGGGCTTTTCTCTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVCLWEA*GFSLAS
Trigger: ACTAGCCAGAGAAAAGCCTCAGGCTTCCCAGAGACA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTTACCCACCACCATGCTaGCTACTGGGGTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGYPPPC*LLGSAL
Trigger: AAGGGCTGACCCCAGTAGTCAGCATGGTGGTGGGTA...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTCGGAGAGCAAGGACTaGTTTGTGGGTCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVSESKD*FVGLWN
Trigger: GTTCCAGAGACCCACAAAGCAGTCCTTGCTCTCCGA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCAACTCGGTAAGGTTTTaGTTGCTCTTCTGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSNSVRF*LLFCGD
Trigger: GTCCCCACAGAAGAGCAAGCAAAACCTTACCGAGTT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCATCAGCTGCCCGCCTaGTGCCTTCAGAGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQHQLPA*CLQSAK
Trigger: TTTTGCACTCTGAAGGCAGCAGGCGGGCAGCTGATG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTGATGCGAGGCAGGTCTaGTCGTGTGTATTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAADARQV*SCVFPL
Trigger: GAGAGGGAATACACACGAGCAGACCTGCCTCGCATC...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCTTAGCGCAAATATGTaGCAAGGGAAGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRLSANM*QGKKGE
Trigger: CTCCCCCTTCTTCCCTTGGCACATATTTGCGCTAAG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAGCAGACTGCTGGCCTaGAGCAGCATGCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFISRLLA*SSMPTP
Trigger: TGGAGTGGGCATGCTGCTGCAGGCCAGCAGTCTGCT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTTCTCCCAGGCTGGAGTaGGATGGCGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGSPRLE*DGVILA
Trigger: AGCCAAGATCACGCCATCGCACTCCAGCCTGGGAGA...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGTGATCCTCCCAAAGTaGTGGGATTATATGCGTGAG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSVILPK*WDYMRE
Trigger: CTCACGCATATAATCCCAGCACTTTGGGAGGATCAC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTCTCTGGATCTTTGCTaGGGAGCTGTGGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVSLDLC*GAVAGT
Trigger: AGTTCCAGCCACAGCTCCCCAGCAAAGATCCAGAGA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACGTCCACAGCTCCCTTaGGCTGTCGTGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLRPQLP*AVVAAW
Trigger: CCAAGCAGCCACGACAGCCCAAGGGAGCTGTGGACG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCTTTGGCAGTGGGGGTaGTGTAGGTTGGGAAGCATT +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVLWQWG*CRLGSI
Trigger: AATGCTTCCCAACCTACACCACCCCCACTGCCAAAG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCAGCTGTTATGATCTCTaGGGCAAGGCGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVSCYDL*GKARLV
Trigger: GACCAGTCTCGCCTTGCCCCAGAGATCATAACAGCT...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCTGGTAACCAAAACTaGGCTGATGCTAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRPGNQN*ADAKDG
Trigger: GCCATCCTTAGCATCAGCCCAGTTTTGGTTACCAGG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTTGGTGACACCACCTTaGGTCAGCTCTGTAATGGGC +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRLVTPP*VSSVMG
Trigger: GCCCATTACAGAGCTGACCCAAGGTGGTGTCACCAA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGCTGATAGAAGGGAGCTaGCCAATTACTGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRLIEGS*PITARG
Trigger: TCCCCGAGCAGTAATTGGCCAGCTCCCTTCTATCAG...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCACACACAACCCCAGTaGAAGGAACGCTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRHTQPQ*KERSSL
Trigger: AAGAGATGAGCGTTCCTTCCACTGGGGTTGTGTGTG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTTCTGGCTTCCCTTATaGCACCGTTTTTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSFWLPL*HRFWSM
Trigger: CATGGACCAAAAACGGTGCCATAAGGGAAGCCAGAA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTAAGCACCCCCAGGGCTaGCTTTCTAGAGACAGACTC +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAKHPQG*LSRDRL
Trigger: GAGTCTGTCTCTAGAAAGCCAGCCCTGGGGGTGCTT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGGGGAGGAGGGGGTCTTaGAGTCACTGGACTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTGRRGS*SHWTWV
Trigger: CACCCAAGTCCAGTGACTCCAAGACCCCCTCCTCCC...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 72 bp CAGAAGCCCTCACAGCATTATCACTCAGCTTTCTGGTaGCTTCCATGCAGCTCCCAGAGGGCAAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QKPSQHYHSAFW*LPCSSQRAREP
Trigger: TGGCTCCCTTGCCCTCTGGGAGCTGCATGGAAGCAACCAGAAAGCTGAGTGATAATGCTGTGAGGGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGAGGCAGCATGTGAATaGCTGTGCCATCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIEAACE*LCHPGP
Trigger: TGGGCCTGGATGGCACAGTCATTCACATGCTGCCTC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCGGTCGCACCTGTACATaGAGACAATGGCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVGRTCT*RQWLVS
Trigger: AGAAACCAGCCATTGTCTTCATGTACAGGTGCGACC...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGAATGCTGTTTGCTGCTaGGGGGACAGGTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQNAVCC*GDRSLL
Trigger: AAGGAGAGACCTGTCCCCTCAGCAGCAAACAGCATT...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCGGGGAAGTGCATGGGTaGCATGAAGAAGGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVGEVHG*HEEGED
Trigger: ATCTTCACCTTCTTCATGTCACCCATGCACTTCCCC...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGCTGCTGAGGCATTGGTaGCACCACCTTGGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTLLRHW*HHLGSA
Trigger: AGCTGACCCAAGGTGGTGTCACCAATGCCTCAGCAG...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATGCACTCCACCCTGCTaGGGCATTGGTGACACCACC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLCTPPC*GIGDTT
Trigger: GGTGGTGTCACCAATGCCTCAGCAGGGTGGAGTGCA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGCAATCAGAATTCCTGTaGGCTGTCCTCCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRQSEFL*AVLQSH
Trigger: ATGGCTCTGGAGGACAGCTCACAGGAATTCTGATTG...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGCACAGGAGGCTTCTTaGAGTTCTAGTCCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSAQEAS*SSSPLY
Trigger: ATAAAGAGGACTAGAACTTCAAGAAGCCTCCTGTGC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATGCCTGGCACACACGGTaGCCACTCAGGCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHAWHTR*PLRPAE
Trigger: CTCTGCTGGCCTGAGTGGTCACCGTGTGTGCCAGGC...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTCTAAGGTCTGAGTCTTaGAGACCTTCCTCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAALRSES*RPSSGA
Trigger: GGCTCCAGAGGAAGGTCTTCAAGACTCAGACCTTAG...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGACTTTTGAGCTCAAGTaGTCCTCCCAAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRTFELK*SSQSAG
Trigger: CCCAGCACTTTGGGAGGATCACTTGAGCTCAAAAGT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCGGCTGGTCTAACTTTTaGGCTCAAGTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVGWSNF*AQVILP
Trigger: TGGGAGGATCACTTGAGCTCAAAAGTTAGACCAGCC...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGTTGGCAAAGCGAGGTTaGCCTCTCATGCGAATCTCC +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQLAKRG*PLMRIS
Trigger: GGAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAA...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTGGTTAAGCTGGAAATaGTGTTTGCTGCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRWLSWK*CLLLRG
Trigger: TCCCCTCAGCAGCAAACAGCATTTCCAGCTTAACCA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTGCCTCGGCCCTGTCTaGAAGAGGGCCCACGCCGGC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHCLGPV*KRAHAG
Trigger: GCCGGCGTGGGCCCTCTTGCAGACAGGGCCGAGGCA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCGGAGCTGGTCTTTCTaGCCAGCCATGAAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQRSWSF*PAMKRS
Trigger: AGACCTTTTCATGGCTGGGCAGAAAGACCAGCTCCG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTCTCTCCCAGGATCTTaGACTGCAACTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVSLPGS*TATLLA
Trigger: AGCCAGAAGAGTTGCAGTGCAAGATCCTGGGAGAGA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTCACTCTTCTGGGGTATaGCTTAAAAACAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFHSSGV*LKNSIC
Trigger: GCAGATGCTGTTTTTAAGGCATACCCCAGAAGAGTG...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGAAGAAGGTTGTCAGTTaGTCTGTGGCAGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRKKVVS*SVAAVG
Trigger: GCCAACAGCTGCCACAGAGCAACTGACAACCTTCTT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGCCACTGGAAAACTCTaGGTAACAGAACCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIATGKL*VTEPAP
Trigger: GGGGGCCGGTTCTGTTACCCAGAGTTTTCCAGTGGC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACCTCGAGGTGCTCACTaGCCATGGCTGCTGACACAT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIPRGAH*PWLLTH
Trigger: ATGTGTCAGCAGCCATGGCCAGTGAGCACCTCGAGG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCAGGTATCTTTTGTCGTaGACTGGTGCTAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSRYLLS*TGARSP
Trigger: TGGACTTCTAGCACCAGTCCACGACAAAAGATACCT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTTCTCTGGATCTTTGCTaGGGAGCTGTGGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAASLDLC*GAVAGT
Trigger: AGTTCCAGCCACAGCTCCCCAGCAAAGATCCAGAGA...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGGAGTGCCTTCTATTTTaGCCACAGGCTCTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRECLLF*PQALEW
Trigger: CCACTCAAGAGCCTGTGGCCAAAATAGAAGGCACTC...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAGAAGAAGTAGAGCGTaGCGGGGGAAAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIRRSRA*RGKGSW
Trigger: CCAGCTCCCTTTCCCCCGCCACGCTCTACTTCTTCT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTTCCCTTGGGCTGTCGTaGCTGCTTGGGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGSLGLS*LLGRYH
Trigger: ATGATACCTCCCAAGCAGCCACGACAGCCCAAGGGA...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAAAGATGAGGTGGGGCTaGGCTCTGCAGGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLKMRWG*ALQAQS
Trigger: GCTTTGGGCCTGCAGAGCCCAGCCCCACCTCATCTT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTCTCATCAAAGGGGTTaGGTAGGTGCAGCATCTCAT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRSHQRG*VGAASH
Trigger: ATGAGATGCTGCACCTACCCAACCCCTTTGATGAGA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGAACTTCACTGGCAAGTaGGGACAGAGTGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRNFTGK*GQSGES
Trigger: TGATTCTCCACTCTGTCCCCACTTGCCAGTGAAGTT...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTAGCATGCCCACTCCATaGCCATTCCTAGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGSMPTP*PFLGAE
Trigger: CTCTGCTCCTAGGAATGGCCATGGAGTGGGCATGCT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGCAAGACATTGCAAGATaGGAGGTGGGGGAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRQDIAR*EVGEVK
Trigger: CTTAACCTCCCCCACCTCCCATCTTGCAATGTCTTG...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTTCAAATACAGAGTGTaGGCAGGGCCAGAGAGAATT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSFKYRV*AGPERI
Trigger: AATTCTCTCTGGCCCTGCCCACACTCTGTATTTGAA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTACCTGGAGTCTGGCTTaGGCAATCCTGAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGTWSLA*AILNWS
Trigger: GGACCAGTTCAGGATTGCCCAAGCCAGACTCCAGGT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTGAGAGAACTGGATCTTaGCAACAAATTCCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFERTGS*QQIPSY
Trigger: GTAGGAGGGAATTTGTTGCCAAGATCCAGTTCTCTC...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGGAGCAGCTAAAGCCATaGCCTCCCTGGAGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQREQLKP*PPWRSS
Trigger: TGAGCTCCTCCAGGGAGGCCATGGCTTTAGCTGCTC...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCCTGGGCCTATCCGCTaGCACAAAAACAAGCCAATA +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVPGPIR*HKNKPI
Trigger: TATTGGCTTGTTTTTGTGCCAGCGGATAGGCCCAGG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGGCTAATGCCTTGTGTTaGCCTGGCGATCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQANALC*PGDPIG
Trigger: TCCTATGGGATCGCCAGGCCAACACAAGGCATTAGC...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGATAGCTGAAGGACCCTaGGGAGGAGGGGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRIAEGP*GGGGLG
Trigger: TCCAAGACCCCCTCCTCCCCAGGGTCCTTCAGCTAT...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTGGGTCTTTCCAAGATaGATGTCCTTTCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRWVFPR*MSFLPC
Trigger: GCAAGGAAGAAAGGACATTCATCTTGGAAAGACCCA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATCACATTGCCATGGGTaGTGGGTGCCTTCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFISHCHG*WVPSQG
Trigger: ACCCTGAGAAGGCACCCATCACCCATGGCAATGTGA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTTTGGCCACAGGCTCTTaGGTGGCTCTCTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGLATGS*VALWIF
Trigger: AAAGATCCAGAGAGCCACTCAAGAGCCTGTGGCCAA...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGATTGAAGCCACAATCTaGGAAAGCACTGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRIEATI*ESTVLA
Trigger: AGCAAGCACAGTGCTTTCTCAGATTGTGGCTTCAAT...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCGCCTCACCACTAGGCTaGGATGTAAAGAGAGATTTG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVASPLG*DVKRDL
Trigger: CAAATCTCTCTTTACATCTCAGCCTAGTGGTGAGGC...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGGGACAATGCTGTTGTaGCTGAAGTGCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLGTMLL*LKCSPC
Trigger: GCAGGGGCTGCACTTCAGTCACAACAGCATTGTCCC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGACACAGCTCACTGGCTaGGTTCATACCAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRTQLTG*VHTKEA
Trigger: AGCTTCTTTGGTATGAACTCAGCCAGTGAGCTGTGT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGATCTTAGAGCTCCACTaGCAGCTATTTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRILELH*QLFHSG
Trigger: CCCTGAATGAAATAGCTGTCAGTGGAGCTCTAAGAT...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCATGTCCGACCTCTTTTaGTTCCCTGAAACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSMSDLF*FPETFL
Trigger: CAAGAAAGTTTCAGGGAATCAAAAGAGGTCGGACAT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGAGTTTGGGCAGATACCTaGGGGGCGCACACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRVWADT*GAHTPP
Trigger: CGGCGGCGTGTGCGCCCCTCAGGTATCTGCCCAAAC...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGTTTGGGCAGATACCTaGGGGGCGCACACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHVWADT*GAHTPP
Trigger: CGGCGGCGTGTGCGCCCCTCAGGTATCTGCCCAAAC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACATGTCAGCAGGGGATaGGGACCCAGAGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLHVSRG*GPRVQK
Trigger: CTTCTGCACTCTGGGTCCTCATCCCCTGCTGACATG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCAGAGGTTTGCAAATTTaGGAGAACTGGATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSRGLQI*ENWILA
Trigger: TGCCAAGATCCAGTTCTCTCAAATTTGCAAACCTCT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCAAGGTTTATGGTTACTaGTTGCCCAGCAACATCTGT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSKVYGY*LPSNIC
Trigger: ACAGATGTTGCTGGGCAAGCAGTAACCATAAACCTT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGACAGGGCCCTCGAGGTaGTCACTGGCCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVTGPSR*SLAMAA
Trigger: AGCAGCCATGGCCAGTGAGCACCTCGAGGGCCCTGT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACTTTCTCTCTGGTGCTaGTGCTGCCCACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFILSLWC*CCPPSE
Trigger: CTCAGATGGTGGGCAGCAGCAGCACCAGAGAGAAAG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGTCTGTGGTCTGAGGTaGTTCAGCCTCACCACTAGG +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIVCGLR*FSLTTR
Trigger: CCTAGTGGTGAGGCTGAAGCACCTCAGACCACAGAC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGTCCAGTTGGTGAAATaGCTCTGCAAAAGGTTACCT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRVQLVK*LCKRLP
Trigger: AGGTAACCTTTTGCAGAGGCATTTCACCAACTGGAC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCTGCTGCCTTCAGAGTaGAAAACTGATTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRLLPSE*KTDSAS
Trigger: AGAAGCTGAATCAGTTTTGCACTCTGAAGGCAGCAG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGTGGAAGAACCAGCACTaGTGGCATCCCAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTWKNQH*WHPSWG
Trigger: ACCCCAACTGGGATGCCAGCAGTGCTGGTTCTTCCA...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGGGAGCGGAATGGGATaGGAGGCAGGTCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHGSGMG*EAGLLV
Trigger: CACGAGCAGACCTGCCTCGCATCCCATTCCGCTCCC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTCAAGGGAAGGCAACTaGAAGTTTGTGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRSREGN*KFVQLN
Trigger: ATTCAGCTGCACAAACTTGCAGTTGCCTTCCCTTGA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAACACCAAGAGCAGACTaGTGGCCTGCAGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLTPRAD*WPAAAC
Trigger: GCATGCTGCTGCAGGCCAGCAGTCTGCTCTTGGTGT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTCTGATATGAAGAGGTaGTTGGTTTACCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSSDMKR*LVYQCC
Trigger: ACAGCACTGGTAAACCAAGCACCTCTTCATATCAGA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACCCCACTTTTGGCACTaGTGTAAGCACGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIPHFWH*CKHGQL
Trigger: CAGCTGTCCGTGCTTACAGCAGTGCCAAAAGTGGGG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACTGCAGGCATGGAGCTaGCAAAGGCCCCATCCAACT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLLQAWS*QRPHPT
Trigger: AGTTGGATGGGGCCTTTGGCAGCTCCATGCCTGCAG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGTGCAGAGAATTTCAATaGATGTCTCCCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQCREFQ*MSPRPA
Trigger: GGCTGGCCTGGGAGACATGCATTGAAATTCTCTGCA...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCAGCATCTGGAGGAATaGCATAAAGCTCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVQHLEE*HKALPH
Trigger: GTGTGGAAGAGCTTTATGCCATTCCTCCAGATGCTG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGACTGGCTTTATGGATaGGTCTTTCTGTACTTTGGT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSDWLYG*VFLYFG
Trigger: ACCAAAGTACAGAAAGACCCATCCATAAAGCCAGTC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCGTCCACAGCTCCCTTaGGCTGTCGTGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHRPQLP*AVVAAW
Trigger: CCAAGCAGCCACGACAGCCCAAGGGAGCTGTGGACG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGGGGGGTGGTGTAGGTTaGGAAGCATTGGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRGGGVG*EALGAS
Trigger: AGAAGCACCCAATGCTTCCCAACCTACACCACCCCC...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCATTTTTGGAGGTCCTTaGAGATTGGCTCTGTATTGG +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSIFGGP*RLALYW
Trigger: CCAATACAGAGCCAATCTCCAAGGACCTCCAAAAAT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAAGGGCCCACGCCGGCTaGAGAGGGATTCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNERAHAG*RGIPCC
Trigger: ACAGCATGGAATCCCTCTCCAGCCGGCGTGGGCCCT...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGGGCTTTTCCCATGCTaGGCCAGAGAGTCTCGCACA +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLGLFPC*ARESRT
Trigger: TGTGCGAGACTCTCTGGCCCAGCATGGGAAAAGCCC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGAAATCCAAACTTCACTaGCAAGTGGGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRKSKLH*QVGTEW
Trigger: CCACTCTGTCCCCACTTGCCAGTGAAGTTTGGATTT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGTAATGGGCCACAAGTaGCTGATAAATCCAAACTTC +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSVMGHK*LINPNF
Trigger: GAAGTTTGGATTTATCAGCCACTTGTGGCCCATTAC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCAGGCAAGACTCTTTGTaGGCTAACCAGCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVRQDSL*ANQPSF
Trigger: GAAAGAAGGCTGGTTAGCCCACAAAGAGTCTTGCCT...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTCTCGGCACAGCACTTTaGGCCTTTGAGAATATGAGC +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAALGTAL*AFENMS
Trigger: GCTCATATTCTCAAAGGCCCAAAGTGCTGTGCCGAG...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATGCAGCCCACCTAGGTaGGGAAAGCTTCTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFICSPPR*GKLLAV
Trigger: CACTGCTAGAAGCTTTCCCCACCTAGGTGGGCTGCA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGTCATTTCCTGTGTTATaGACAGGGCACCTACCCTGG +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQSFPVL*TGHLPW
Trigger: CCAGGGTAGGTGCCCTGTCCATAACACAGGAAATGA...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCACACAGAGAGCTTTTaGGTCCACACCAACATGGGT +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQHTESF*VHTNMG
Trigger: ACCCATGTTGGTGTGGACCCAAAAGCTCTCTGTGTG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGTTGACCCTTCCTCCTaGGCCCAGGCAACACACAGA +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLVDPSS*AQATHR
Trigger: TCTGTGTGTTGCCTGGGCCCAGGAGGAAGGGTCAAC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAGCATTGGGTGGTCCTaGTGGGGAAAACCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFISIGWS*WGKPKS
Trigger: GGACTTGGGTTTTCCCCACCAGGACCACCCAATGCT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTAGCTTCTTGGCTGAATaGGGCCCTGAAGAACAGAGA +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAASFLAE*GPEEQR
Trigger: TCTCTGTTCTTCAGGGCCCCATTCAGCCAAGAAGCT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCAAAGACTCGTATGGTaGTGGGGAGAACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQQRLVW*WGELAS
Trigger: TGAAGCCAGTTCTCCCCACCACCATACGAGTCTTTG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGAGACAAAGACTCGTATaGTGGTGGGGAGAACTGGCT +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQRQRLV*WWGELA
Trigger: AGCCAGTTCTCCCCACCACCATACGAGTCTTTGTCT...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTAATTGCCCGTGTTCCTaGTGCGGTGGTTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGNCPCS*CGGCYC
Trigger: ACAGTAACAACCACCGCATCAGGAACACGGGCAATT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGTCATTTCCTCTTATCTaGGGGGCAGTATCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQSFPLI*GAVSKP
Trigger: AGGCTTGGATACTGCCCCTCAGATAAGAGGAAATGA...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAACTGGCCATGGCTGCTaGCACATCCACGACAGTATA +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFITGHGC*HIHDSI
Trigger: TATACTGTCGTGGATGTGTCAGCAGCCATGGCCAGT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGACTGGCCATGGCTGCTaGCACATCCACGACAGTATA +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRTGHGC*HIHDSI
Trigger: TATACTGTCGTGGATGTGTCAGCAGCCATGGCCAGT...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGCTTTAGGGCCAGATTaGGGTGTTTCTGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIALGPD*GVSGGD
Trigger: GTCTCCTCCAGAAACACCTCAATCTGGCCCTAAAGC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATACACTGAGCTGGCCTTaGGCAGGGTCGCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHTLSWP*AGSHLY
Trigger: GTACAGGTGCGACCCTGCTCAAGGCCAGCTCAGTGT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACAATGCTGTTGTGACTaGAGTGCAGCCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLQCCCD*SAAPAI
Trigger: GATGGCAGGGGCTGCACTTCAGTCACAACAGCATTG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCCTAGTGGGATAAGATaGGGTGGGGCTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHPSGIR*GGAGLC
Trigger: GCAGAGCCCAGCCCCACCTCATCTTATCCCACTAGG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTTAAACTCTGTTTCCTaGTGGCCCCTAGAGAATTGC +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVLNSVS*WPLENC
Trigger: GCAATTCTCTAGGGGCCATCAGGAAACAGAGTTTAA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATCTCTGCACTGGTAGATaGGGGGCCTCAGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHLCTGR*GASGLT
Trigger: AGTGAGCCCTGAGGCCCCTCATCTACCAGTGCAGAG...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGTAACGAGATGCAGATaGACCGGGAGAGAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIVTRCR*TGREGS
Trigger: ACTCCCTTCTCTCCCGGTTCATCTGCATCTCGTTAC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGAACCCTGGGCAAAGATaGACCATAGGCTTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQNPGQR*TIGLEF
Trigger: AAACTCCAAGCCTATGGTTCATCTTTGCCCAGGGTT...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGTTAACCAGGCTTTCTaGAATTCAGCCAGGAGATAT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRVNQAF*NSARRY
Trigger: ATATCTCCTGGCTGAATTTCAGAAAGCCTGGTTAAC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATGTCATGAGGGGAGCTaGAATGAGGGCTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFICHEGS*NEGSDV
Trigger: CACATCAGAGCCCTCATTTCAGCTCCCCTCATGACA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGCTTCTCCATGACTGCTaGCTGGTCTGTCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTLLHDC*LVCPSL
Trigger: AAGGCTAGGACAGACCAGGCAGCAGTCATGGAGAAG...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGATGCGAGGCAGGTCTaGTCGTGTGTATTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLDARQV*SCVFPL
Trigger: GAGAGGGAATACACACGAGCAGACCTGCCTCGCATC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAAGCAGACTGCTGGCCTaGAGCAGCATGCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNESRLLA*SSMPTP
Trigger: TGGAGTGGGCATGCTGCTGCAGGCCAGCAGTCTGCT...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCAGGCAAGGAGTTATGTaGACATGTTCTATGCTAAGA +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSRQGVM*TCSMLR
Trigger: TCTTAGCATAGAACATGTGCACATAACTCCTTGCCT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGACCACTTACCAGCTATaGAGCTTTAGGCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRTTYQL*SFRQVS
Trigger: AGAAACTTGCCTAAAGCTGCATAGCTGGTAAGTGGT...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTCTGGATTTTTGGAAATaGGCACTTATTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFLDFWK*ALICPG
Trigger: ACCAGGACAAATAAGTGCCCATTTCCAAAAATCCAG...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGACTGGCTTTATGGATaGGTCTTTCTGTACTTTGGT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRDWLYG*VFLYFG
Trigger: ACCAAAGTACAGAAAGACCCATCCATAAAGCCAGTC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGGGAGAGGGGGTGACTaGCTTTATGGATGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIGRGGD*LYGWVF
Trigger: AAAGACCCATCCATAAAGCCAGTCACCCCCTCTCCC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCCGGGGGAAAGGGAGCTaGTGGCTCACTTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKIRGKGS*WLTLGA
Trigger: AGCCCCCAAAGTGAGCCACCAGCTCCCTTTCCCCCG...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACATCTTCTTTGGCAGTaGGGGTGGTGTAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIHLLWQ*GWCRLG
Trigger: TCCCAACCTACACCACCCCCACTGCCAAAGAAGATG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCGAGGTCCTTGGAGATTaGCTCTGTATTGGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVEVLGD*LCIGSY
Trigger: ATAAGAGCCAATACAGAGCCAATCTCCAAGGACCTC...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTGTCTCTGCGGCTTCTaGATGCCTCGGCCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVCLCGF*MPRPCL
Trigger: CAGACAGGGCCGAGGCATCCAGAAGCCGCAGAGACA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATTGTCTCTGCGGCTTCTaGATGCCTCGGCCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHCLCGF*MPRPCL
Trigger: CAGACAGGGCCGAGGCATCCAGAAGCCGCAGAGACA...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAAGATGAGGTGGGGCTaGGCTCTGCAGGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHKMRWG*ALQAQS
Trigger: GCTTTGGGCCTGCAGAGCCCAGCCCCACCTCATCTT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTGTTCGAGTGACTCTTaGGATTTCAAGGTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSCSSDS*DFKVKV
Trigger: TACTTTGACCTTGAAATCCCAAGAGTCACTCGAACA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTACATTGAAATTTACATaGGCAAGGCACCACGAACAT +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFTLKFT*ARHHEH
Trigger: ATGTTCGTGGTGCCTTGCCCATGTAAATTTCAATGT...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTCATTGCCATATTCCTaGCTTCCAGTTCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVSLPYS*LPVLAQ
Trigger: CTGAGCTAGAACTGGAAGCCAGGAATATGGCAATGA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGTTCACTCATTAGGCTaGAGCGGAATTTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRVHSLG*SGIFNP
Trigger: AGGATTGAAAATTCCGCTCCAGCCTAATGAGTGAAC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGAACCCAGAGACTTTCTaGAGTGGGAAACATGTAATG +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRNPETF*SGKHVM
Trigger: CATTACATGTTTCCCACTCCAGAAAGTCTCTGGGTT...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTTATCACTCAGCTTTCTaGTTGCTTCCATGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAYHSAF*LLPCSS
Trigger: GGAGCTGCATGGAAGCAACCAGAAAGCTGAGTGATA...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGATTGGGTGGTCCTGGTaGGGAAAACCCAAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTIGWSW*GKPKSL
Trigger: TAGGGACTTGGGTTTTCCCCACCAGGACCACCCAAT...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGCAGACTCCTTCACCCTaGAAGAGGAGCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRQTPSP*KRSISA
Trigger: AGCTGAGATGCTCCTCTTCCAGGGTGAAGGAGTCTG...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGGGTCTTGGAGTCACTaGACTTGGGTGGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIGSWSH*TWVVFP
Trigger: AGGAAAGACCACCCAAGTCCAGTGACTCCAAGACCC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTTGTTAAGTGGTTTCTaGCTCAAGGCAGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRLLSGF*LKAALF
Trigger: AAACAGAGCTGCCTTGAGTCAGAAACCACTTAACAA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCCTCCTCCATGTTACTaGAAAGTACATCCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQPPPCY*KVHPLH
Trigger: GTGAAGAGGATGTACTTTTCAGTAACATGGAGGAGG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGAGGCAGCATGTGAATaGCTGTGCCATCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVEAACE*LCHPGP
Trigger: TGGGCCTGGATGGCACAGTCATTCACATGCTGCCTC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGGAGGAGGCAGCATGTaGATGACTGTGCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHGGGSM*MTVPSR
Trigger: CCTGGATGGCACAGTCATTCACATGCTGCCTCCTCC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCTGTATTGGCTCTTATaGTCATCTTCTTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVLYWLL*SSSLAV
Trigger: CACTGCCAAAGAAGATGATCATAAGAGCCAATACAG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGATGCCTTTGGCGTCTaGAATGAGGATCCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLDAFGV*NEDPLR
Trigger: TCTGAGCGGATCCTCATTTCAGACGCCAAAGGCATC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGATGAAAATGGGTCTATaGCCCAAGGATGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQMKMGL*PKDGIS
Trigger: AGAGATCCCATCCTTGGGTCATAGACCCATTTTCAT...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGTTCCACAGGTTACAGTaGCTCTTTTTCTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQFHRLQ*LFFSSC
Trigger: GCAGGATGAGAAAAAGAGTCACTGTAACCTGTGGAA...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACAGCCTAGGGGTTGGTaGTTCTTACGTTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIQPRGW*FLRCCS
Trigger: GGAACAACAACGTAAGAATCACCAACCCCTAGGCTG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATGCGAATCTTGCAGATaGTGCAGTACCAGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLCESCR*CSTRPC
Trigger: ACAGGGCCTGGTACTGCATCATCTGCAAGATTCGCA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATTGGCTTGGGCAATCCTaGACTGGTCCCACCATCCAC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHWLGQS*TGPTIH
Trigger: GTGGATGGTGGGACCAGTTCAGGATTGCCCAAGCCA...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATTCAAGTGTGGGCTGGTaGGCATTGGGTGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHSSVGW*ALGGPG
Trigger: ACCAGGACCACCCAATGCTCACCAGCCCACACTTGA...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGTGACAGCTAGAGAGTaGGGGAGGACTGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVVTARE*GRTVPH
Trigger: GTGAGGGACAGTCCTCCCTCACTCTCTAGCTGTCAC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGAGTGGAGGGGGTAGGTaGATGGAAAGCAGATTATTA +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQSGGGR*MESRLL
Trigger: TAATAATCTGCTTTCCATTCACCTACCCCCTCCACT...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGACCCATTTCTGCCTCTaGTGTGCTATGTCACCATCG +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRTHFCL*CAMSPS
Trigger: CGATGGTGACATAGCACATCAGAGGCAGAAATGGGT...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTATACTTTGCCCATCTaGCACTATCATAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVYTLPI*HYHSGL
Trigger: AAGCCCACTATGATAGTGGCAGATGGGCAAAGTATA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTTTATGGTTACTGCTTaGCCAGCAACATCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVFMVTA*PATSVE
Trigger: CTCTACAGATGTTGCTGGGCAAGCAGTAACCATAAA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAACTCTGGTGCTGCTGCTaGCCACCATCTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNELWCCC*PPSETP
Trigger: AGGAGTCTCAGATGGTGGGCAGCAGCAGCACCAGAG...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCTGCAAAAGGTTACCTaGATGGTAAGGAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVLQKVT*MVRRRS
Trigger: ACTTCTTCTCCTTACCATGCAGGTAACCTTTTGCAG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCCAGCGCTTAGGTTTTaGATCAGCTGCCCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVPALRF*ISCPPA
Trigger: AGCAGGCGGGCAGCTGATGCAAAACCTAAGCGCTGG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTTTGGGAAGCATTGGGTaGTTCTTGGTCTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGLGSIG*FLVCFP
Trigger: GGGAAAACAGACCAAGAAGCACCCAATGCTTCCCAA...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGGGAGCGGAATGGGATaGGAGGCAGGTCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSGSGMG*EAGLLV
Trigger: CACGAGCAGACCTGCCTCGCATCCCATTCCGCTCCC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGGCAAGGCGCGGCCATaGCACAGGACACCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHGKARP*HRTPRA
Trigger: TGCTCTTGGTGTCCTGTGGCATGGCCGCGCCTTGCC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGGTCAGTGGTCTGTGTaGTGCCCTTCAGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIGQWSV*CPSVHN
Trigger: ATTATGCACTGAAGGGCAGCACACAGACCACTGACC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTCTAACAAGGCACTCTaGTATACATTCAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRSNKAL*YTFSLA
Trigger: AGCAAGACTGAATGTATAGCAGAGTGCCTTGTTAGA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCGAGGAACTTTGTATCTaGCAGGGCTTTCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVEELCI*QGFLHL
Trigger: AAGATGAAGAAAGCCCTGGCAGATACAAAGTTCCTC...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTCTTGCTTCTGTATTTaGCTCATGCCAAAATGCCCT +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRSCFCI*LMPKCP
Trigger: AGGGCATTTTGGCATGAGGCAAATACAGAAGCAAGA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACAGCTGGGACTACAGGTaGCCACCACCAAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHSWDYR*PPPSPA
Trigger: AGCCGGGCTTGGTGGTGGGCACCTGTAGTCCCAGCT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACACTCTCCTCGCCACTaGAAAACTCTGGGTAACAGA +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIHSPRH*KTLGNR
Trigger: TCTGTTACCCAGAGTTTTCCAGTGGCGAGGAGAGTG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTATATGGCTTGCACAATaGCTGTTCCAGGTTCACAAC +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAIWLAQ*LFQVHN
Trigger: GTTGTGAACCTGGAACAGCCATTGTGCAAGCCATAT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACCACAGGCTCTTGAGTaGCTCTCTGGATCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLPQALE*LSGSLL
Trigger: CAGCAAAGATCCAGAGAGCCACTCAAGAGCCTGTGG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAAGATTTGGGCCGGACTaGCGTACTCTTAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLRFGPD*RTLRCA
Trigger: AGCACACCTAAGAGTACGCCAGTCCGGCCCAAATCT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGGGAAAGGGAGCTGGTaGCTCACTTTGGGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHGKGSW*LTLGAS
Trigger: ACTAGCCCCCAAAGTGAGCCACCAGCTCCCTTTCCC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAAGAAGAAGTAGAGCGTaGCGGGGGAAAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNERRSRA*RGKGSW
Trigger: CCAGCTCCCTTTCCCCCGCCACGCTCTACTTCTTCT...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGTGATGGCGCTGAACTaGAGGAGGAGGCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVVMALN*RRRQHV
Trigger: CACATGCTGCCTCCTCCTCCAGTTCAGCGCCATCAC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGCTGTCGTGGCTGCTTaGGAGGTATCATGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHAVVAA*EVSWLL
Trigger: GAGCAGCCATGATACCTCCCAAGCAGCCACGACAGC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGCTGTCGTGGCTGCTTaGGAGGTATCATGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVAVVAA*EVSWLL
Trigger: GAGCAGCCATGATACCTCCCAAGCAGCCACGACAGC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACATCTTCTTTGGCAGTaGGGGTGGTGTAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLHLLWQ*GWCRLG
Trigger: TCCCAACCTACACCACCCCCACTGCCAAAGAAGATG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATGCTGGCATCCCAGTTaGGGTCGATATCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLCWHPS*GRYHRW
Trigger: CCACCTATGATATCGACCCCAACTGGGATGCCAGCA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACAGGGCCCACGCCGGCTaGAGAGGGATTCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHRAHAG*RGIPCC
Trigger: ACAGCATGGAATCCCTCTCCAGCCGGCGTGGGCCCT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGGGGCAAGGCGAGACTaGTCCCGGAGGATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSGARRD*SRRISG
Trigger: CCCCGAGATCCTCCGGGACCAGTCTCGCCTTGCCCC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACCTCTCCTTCAGCTCTaGGTTCTCATCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIPLLQL*VLIKGV
Trigger: AACCCCTTTGATGAGAACCCAGAGCTGAAGGAGAGG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATTCCGCTCAGAAGGGTTaGGATTCAGGAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHSAQKG*DSGGSW
Trigger: CCAGCTGCCTCCTGAATCCCAACCCTTCTGAGCGGA...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCCCCAGAGCAGACACTaGAGGATGCCTTTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHPQSRH*RMPLAS
Trigger: AGACGCCAAAGGCATCCTCCAGTGTCTGCTCTGGGG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCTTTCTACTCTCTCCTaGAACAAAAGATATAGTCCC +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRLSTLS*NKRYSP
Trigger: GGGACTATATCTTTTGTTCCAGGAGAGAGTAGAAAG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTAACTTCACTGGCAAGTaGGGACAGAGTGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGNFTGK*GQSGES
Trigger: TGATTCTCCACTCTGTCCCCACTTGCCAGTGAAGTT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGGTTAAGGGAATGTGCTaGCTGACATGGTCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTVKGMC*LTWSVV
Trigger: GACCACTGACCATGTCAGCCAGCACATTCCCTTAAC...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTTGTTCATGCTCATGTaGCTTAAGGAAAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSLFMLM*LKEKFQ
Trigger: TTGGAACTTTTCCTTAAGCCACATGAGCATGAACAA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGCACCTTGTACCTTCTaGGCACTTACAGATATTAAA +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRAPCTF*ALTDIK
Trigger: TTTAATATCTGTAAGTGCCCAGAAGGTACAAGGTGC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGAGAGACTTTCTGGAGTaGGAAACATGTAATGGGATG +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRRDFLE*ETCNGM
Trigger: CATCCCATTACATGTTTCCCACTCCAGAAAGTCTCT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCTGGTGAGCATTGGGTaGTCCTGGTGGGGAAAACCC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVLVSIG*SWWGKP
Trigger: GGGTTTTCCCCACCAGGACCACCCAATGCTCACCAG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATCTCACTCCAGGAAGCTaGGAGGTGGAGTACGGTTGC +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHLTPGS*EVEYGC
Trigger: GCAACCGTACTCCACCTCCCAGCTTCCTGGAGTGAG...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTTCTGCTGTTTTCCATaGACAAAGGTTTATCACCTT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSFCCFP*TKVYHL
Trigger: AAGGTGATAAACCTTTGTCCATGGAAAACAGCAGAA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAACACCATGCTGACTACTaGGGTCAGCCCTTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNEHHADY*GQPLPN
Trigger: GTTGGGCAAGGGCTGACCCCAGTAGTCAGCATGGTG...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 72 bp TGTCAACTAGTGAGGAGAATGAAAAACATGCCAGGGTaGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: CQLVRRMKNMPG*AQQVQFVSPLS
Trigger: GGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTGGCATGTTTTTCATTCTCCTCACTAGTTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
3UTR CAA 72 bp AGATGGAGAGCAAACAGGCAAGTCTGCTCAGGGGCCTaGAGAGGAAATGTCTCAAAGACGGCCAGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: RWRANRQVCSGA*RGNVSKTASAN
Trigger: ATTAGCACTGGCCGTCTTTGAGACATTTCCTCTCAAGGCCCCTGAGCAGACTTGCCTGTTTGCTCTCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAAACCTTCTGAGCCACTaGGCCCCTTTTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLNLLSH*APFMLC
Trigger: ACAGAGCATAAAAGGGGCTCAGTGGCTCAGAAGGTT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTGCACTCCACCCTGCTaGGGCATTGGTGACACCACC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSCTPPC*GIGDTT
Trigger: GGTGGTGTCACCAATGCCTCAGCAGGGTGGAGTGCA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTGTTTGGAAGCAAAAGTaGCCCCCACTTAATCTGATA +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAVWKQK*PPLNLI
Trigger: TATCAGATTAAGTGGGGGTCACTTTTGCTTCCAAAC...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGAAAAAGGTGCTTTTCTaGGGATGGATTTATCAGCTA +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRKKVLF*GWIYQL
Trigger: TAGCTGATAAATCCATCCTCAGAAAAGCACCTTTTT...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAACCAAACCATGGGGGTaGATGGGACACGTCAAGATA +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLTKPWG*MGHVKI
Trigger: TATCTTGACGTGTCCCATTCACCCCCATGGTTTGGT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGTCTCTTCCTGTTAGTTaGGTCAGACACCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRSLPVS*VRHQGQ
Trigger: CTGTCCTTGGTGTCTGACTCAACTAACAGGAAGAGA...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGTGCACCAACATTGACTaGACTGTATACCCTGTCACC +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTCTNID*TVYPVT
Trigger: GGTGACAGGGTATACAGTTCAGTCAATGTTGGTGCA...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGTCTGGGGGAAGCTGGTaGAAACTTTTAGGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQSGGSW*KLLGLK
Trigger: CTTTAAACCTAAAAGTTTGCACCAGCTTCCCCCAGA...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGCCATGGGTGATGGGTaGCTTCTCAGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGAMGDG*LLRVWG
Trigger: CCCCCAGACCCTGAGAAGGCACCCATCACCCATGGC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTCACCACATATACTTTaGCCATCTGCCACTATCATA +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVSPHIL*PSATII
Trigger: TATGATAGTGGCAGATGGGCAAAGTATATGTGGTGA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTAAGGTTTATGGTTACTaGTTGCCCAGCAACATCTGT +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAKVYGY*LPSNIC
Trigger: ACAGATGTTGCTGGGCAAGCAGTAACCATAAACCTT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAGGTTTTGCATCAGCTaGCCGCCTGCTGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHRFCIS*PPAAFR
Trigger: TCTGAAGGCAGCAGGCGGGCAGCTGATGCAAAACCT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAAGGTTTTGCATCAGCTaGCCGCCTGCTGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNERFCIS*PPAAFR
Trigger: TCTGAAGGCAGCAGGCGGGCAGCTGATGCAAAACCT...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATTGGGAAGCATTGGGTaGTTCTTGGTCTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFILGSIG*FLVCFP
Trigger: GGGAAAACAGACCAAGAAGCACCCAATGCTTCCCAA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTGGAAGAACCAGCACTaGTGGCATCCCAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVWKNQH*WHPSWG
Trigger: ACCCCAACTGGGATGCCAGCAGTGCTGGTTCTTCCA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGGACAGGTCTCTCCTTaGGCAAAGGCCTTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVGQVSP*AKAFPR
Trigger: CCTTGGAAAGGCCTTTGCGCAAGGAGAGACCTGTCC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAAGTCCTCGATAAAGTaGTTGTCTCTGCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIKSSIK*LSLRLL
Trigger: CAGAAGCCGCAGAGACAAGCACTTTATCGAGGACTT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTCTGTCCTCCATGCAGTaGACATACTTACAGATAATG +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAALSSMQ*TYLQIM
Trigger: CATTATCTGTAAGTATGTGCACTGCATGGAGGACAG...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATAAGGGGAGCACAGGCTaGACACATGGTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHKGSTG*THGEQL
Trigger: GAGCTGTTCACCATGTGTGCAGCCTGTGCTCCCCTT...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGAACCCTGCCACAGGTTaGTTTTCTAGAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVNPATG*FSRGLA
Trigger: GGCCAGGCCTCTAGAAAAGCAACCTGTGGCAGGGTT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTGGCCTGCAGCAGCATaGCCACTCCATGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHWPAAA*PLHGHS
Trigger: GGAATGGCCATGGAGTGGGCATGCTGCTGCAGGCCA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGTGTGCTGCCCTTCAGTaGATAATCAGGCAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRCAALQ*IIRQGV
Trigger: AACTCCTTGCCTGATTATGCACTGAAGGGCAGCACA...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGAGGTTAAGGGAATGTaGTGGCTGACATGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLEVKGM*WLTWSV
Trigger: CACTGACCATGTCAGCCAGCACATTCCCTTAACCTC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTGCTTGGTTTACCAGTaGTGTAAGATAATGGTAGTG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVCLVYQ*CKIMVV
Trigger: CACTACCATTATCTTACAGCACTGGTAAACCAAGCA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATCTCTCCCAGGATCTTaGACTGCAACTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLSLPGS*TATLLA
Trigger: AGCCAGAAGAGTTGCAGTGCAAGATCCTGGGAGAGA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGGGAATGCAGGCCCTTaGAGCCCACCTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGGNAGP*SPPRWG
Trigger: TCCCCACCTAGGTGGGCTGCAAGGGCCTGCATTCCC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATGCCTCATGCCAAAATaGCCTGCATATCCTCAACAG +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFICLMPK*PAYPQQ
Trigger: CTGTTGAGGATATGCAGGGCATTTTGGCATGAGGCA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAAAGGGTGGCACCACTaGTGGCAGAGAGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHKGWHH*WQRGPF
Trigger: GAAAGGTCCTCTCTGCCAGCAGTGGTGCCACCCTTT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGTGTTGGCCACTTAGTTaGCTTTGTGGTTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTCWPLS*LCGSRS
Trigger: GCTTCTGGAACCACAAAGGCAACTAAGTGGCCAACA...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTTGTCTTGTATATATTTaGTCAAGCATGGAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFCLVYI*SSMELL
Trigger: TAAGAGCTCCATGCTTGAGCAAATATATACAAGACA...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTACCCACTCAGAGTTTaGCTTTTTGATCAACAATAT +
Preference number: 4 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSYPLRV*LFDQQY
Trigger: ATATTGTTGATCAAAAAGGCAAACTCTGAGTGGGTA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCCATTACAAATCTTCTaGGATAAACTACTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVPLQIF*DKLLAV
Trigger: GACAGCCAGTAGTTTATCCCAGAAGATTTGTAATGG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGGCAAGGACTGCTTTGTaGGTCTCTGGAACTTTTATT +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQARTAL*VSGTFI
Trigger: AATAAAAGTTCCAGAGACCCACAAAGCAGTCCTTGC...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGAGTGCCTTCTATTTTaGCCACAGGCTCTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLECLLF*PQALEW
Trigger: CCACTCAAGAGCCTGTGGCCAAAATAGAAGGCACTC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACCTCTCCTTCAGCTCTaGGTTCTCATCAAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLPLLQL*VLIKGV
Trigger: AACCCCTTTGATGAGAACCCAGAGCTGAAGGAGAGG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGATGTCTAGCCAGTTTTaGAGCAGGGTGTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRMSSQF*SRVFLC
Trigger: ACAGAGGAACACCCTGCTCCAAAACTGGCTAGACAT...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGGTCGTGGTAGAGACTaGTTAAGTCTGTCTACTGCT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIGRGRD*LSLSTA
Trigger: AGCAGTAGACAGACTTAACCAGTCTCTACCACGACC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCCAAGAGCAGACTGCTaGCCTGCAGCAGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSPRADC*PAAACP
Trigger: TGGGCATGCTGCTGCAGGCCAGCAGTCTGCTCTTGG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTTGTTCATGCTCATGTaGCTTAAGGAAAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRLFMLM*LKEKFQ
Trigger: TTGGAACTTTTCCTTAAGCCACATGAGCATGAACAA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAAGCAAGAGCAGCACTTaGATTTGTCTCGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLSKSST*ICLGTA
Trigger: TGCTGTGCCGAGACAAATCCAAGTGCTGCTCTTGCT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTAACCCAGAGACTTTCTaGAGTGGGAAACATGTAATG +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAANPETF*SGKHVM
Trigger: CATTACATGTTTCCCACTCCAGAAAGTCTCTGGGTT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTAATGAACCCTATGTCTaGTTCAACATTCAAGTTATC +
Preference number: 4 (lower is better)
Translates to: PLRPAELHTAARSWYALFNEPYV*FNIQVI
Trigger: GATAACTTGAATGTTGAACCAGACATAGGGTTCATT...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGGGTGGCACCACTGCTaGCAGAGAGGACCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHGWHHC*QRGPFN
Trigger: ATTGAAAGGTCCTCTCTGCCAGCAGTGGTGCCACCC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCAGCAAACCAAAGGGTaGCACCACTGCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHQQTKG*HHCWQR
Trigger: TCTCTGCCAGCAGTGGTGCCACCCTTTGGTTTGCTG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCAGGGCCTGTGTCCCTaGGGATTGTCTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSQGLCP*GLSGQA
Trigger: AGCCTGACCAGACAATCCCCAGGGACACAGGCCCTG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATACTCCAGCTCAAGTGTaGGCTGGTGAGCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHTPAQV*AGEHWV
Trigger: CACCCAATGCTCACCAGCCCACACTTGAGCTGGAGT...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTAGCTGCTGCAACATCTaGTCAGCAATAAGCATGAGA +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGSCCNI*SAISMR
Trigger: TCTCATGCTTATTGCTGACCAGATGTTGCAGCAGCT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTGCACTTACTATTGCCTaGCAGTGGACTAAATACACT +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAALTIA*QWTKYT
Trigger: AGTGTATTTAGTCCACTGCCAGGCAATAGTAAGTGC...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTTCAGACAAATTAGGTaGCTTAACAGGGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVFRQIR*LNRDGF
Trigger: AAAACCATCCCTGTTAAGTCACCTAATTTGTCTGAA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTTGGCCACAGGCTCTTaGGTGGCTCTCTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVLATGS*VALWIF
Trigger: AAAGATCCAGAGAGCCACTCAAGAGCCTGTGGCCAA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGAGAGGCAGCATGTGAATaGCTGTGCCATCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQREAACE*LCHPGP
Trigger: TGGGCCTGGATGGCACAGTCATTCACATGCTGCCTC...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTACACTGAGCTGGCCTTaGGCAGGGTCGCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGTLSWP*AGSHLY
Trigger: GTACAGGTGCGACCCTGCTCAAGGCCAGCTCAGTGT...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCTGTATTGGCTCTTATaGTCATCTTCTTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGLYWLL*SSSLAV
Trigger: CACTGCCAAAGAAGATGATCATAAGAGCCAATACAG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTTGGATCTTTTGCATATaGAGCAGTATAGTAAACCGC +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAWIFCI*SSIVNR
Trigger: GCGGTTTACTATACTGCTTCATATGCAAAAGATCCA...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGAGGCTGCACACATGGTaGACAGCTCTCAATCACCCA +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVRLHTW*TALNHP
Trigger: TGGGTGATTGAGAGCTGTTCACCATGTGTGCAGCCT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGGTCAGGTTACTTCCCTaGACCAAAGTATTCATAACT +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQVRLLP*TKVFIT
Trigger: AGTTATGAATACTTTGGTTCAGGGAAGTAACCTGAC...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCAGGAAGCCTGCAGGTaGCTGCTCACCAGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSQEACR*LLTRGR
Trigger: TCGCCCTCTGGTGAGCAGTCACCTGCAGGCTTCCTG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACCCGCTCATATTACCTaGATAGCTCTGATTTCCACG +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLPAHIT*IALIST
Trigger: CGTGGAAATCAGAGCTATTCAGGTAATATGAGCGGG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTGATCTCCTGACCTCGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPDLLTS*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACGAGGTCAGGAGATC...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCAAACAAACCCTCTCTaGCTTGTTTTCACAAGGGTA +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGQTNPL*LVFTRV
Trigger: TACCCTTGTGAAAACAAGTCAGAGAGGGTTTGTTTG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCCCATAGGAGTTCAGTaGAGGTCTGACAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHPIGVQ*RSDRER
Trigger: CCTTTCCCTGTCAGACCTTCACTGAACTCCTATGGG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCACCACACCTGGCCAATaGTATATATTGTTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: GQSGESGSGSRGETIRAVTTPGQ*YILLSK
Trigger: CTTACTTAACAATATATATCATTGGCCAGGTGTGGT...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATCATCCCTATGTGACTaGACGCCTGAAGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLSSLCD*TPEEVE
Trigger: TTCCACTTCTTCAGGCGTTCAGTCACATAGGGATGA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCAATTGCACCAACATTaGCTGAACTGTATACCCTGT +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGQLHQH*LNCIPC
Trigger: ACAGGGTATACAGTTCAGTCAATGTTGGTGCAATTG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGGTGACTCTGTCACTTTaGCCTTGGAGATCTGAAATC +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTVTLSL*PWRSEI
Trigger: GATTTCAGATCTCCAAGGTCAAAGTGACAGAGTCAC...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAGAGGTTGCCCTCTCATaGGAATCTCCATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNEEVALS*ESPWPT
Trigger: TGTTGGCCATGGAGATTCGCATGAGAGGGCAACCTC...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACGACAGTATATGGCTTaGACAATGGCTGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLRQYMA*TMAVPG
Trigger: ACCTGGAACAGCCATTGTGCAAGCCATATACTGTCG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGGTCCAGTTGGTGAAATaGCTCTGCAAAAGGTTACCT +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRVQLVK*LCKRLP
Trigger: AGGTAACCTTTTGCAGAGGCATTTCACCAACTGGAC...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCAGCTGCCCGCCTGCTaGCTTCAGAGTGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSQLPAC*LQSAKL
Trigger: CAGTTTTGCACTCTGAAGGCAGCAGGCGGGCAGCTG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCTTCTCCATGACTGCTaGCTGGTCTGTCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLLHDC*LVCPSL
Trigger: AAGGCTAGGACAGACCAGGCAGCAGTCATGGAGAAG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCTGAAGTGCAGCCCCTaGCATCTTGCTTCCCAACAA +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVLKCSP*HLASQQ
Trigger: TTGTTGGGAAGCAAGATGGCAGGGGCTGCACTTCAG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATCAAGGGAAGGCAACTaGAAGTTTGTGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFISREGN*KFVQLN
Trigger: ATTCAGCTGCACAAACTTGCAGTTGCCTTCCCTTGA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATGGCCTGCAGCAGCATaGCCACTCCATGGCCATTCC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGWPAAA*PLHGHS
Trigger: GGAATGGCCATGGAGTGGGCATGCTGCTGCAGGCCA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGGCAAGGCGCGGCCATaGCACAGGACACCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSGKARP*HRTPRA
Trigger: TGCTCTTGGTGTCCTGTGGCATGGCCGCGCCTTGCC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATGTGCTGCCCTTCAGTaGATAATCAGGCAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLCAALQ*IIRQGV
Trigger: AACTCCTTGCCTGATTATGCACTGAAGGGCAGCACA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCATGCCAAAATGCCCTaGATATCCTCAACAGAAAAT +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQHAKMP*ISSTEN
Trigger: ATTTTCTGTTGAGGATATGCAGGGCATTTTGGCATG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTAAGCCTGCAGGTGACTaGTCACCAGAGGGCGATCTC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSKPAGD*SPEGDL
Trigger: GAGATCGCCCTCTGGTGAGCAGTCACCTGCAGGCTT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGGGAGTTTCAACATGTTaGCCAGGCTGGTCTAACTTT +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRGVSTC*PGWSNF
Trigger: AAAGTTAGACCAGCCTGGGCAACATGTTGAAACTCC...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAATCCACGACAGTATATaGCTTGCACAATGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIIHDSI*LAQWLF
Trigger: GAACAGCCATTGTGCAAGCCATATACTGTCGTGGAT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCCTCGAGGTGCTCACTaGCCATGGCTGCTGACACAT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSPRGAH*PWLLTH
Trigger: ATGTGTCAGCAGCCATGGCCAGTGAGCACCTCGAGG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCCACAGGCTCTTGAGTaGCTCTCTGGATCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVPQALE*LSGSLL
Trigger: CAGCAAAGATCCAGAGAGCCACTCAAGAGCCTGTGG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGAGCAACATCAGCATCTaGAGGAATGGCATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRSNISI*RNGIKL
Trigger: GAGCTTTATGCCATTCCTCCAGATGCTGATGTTGCT...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGAGATTTGGGCCGGACTaGCGTACTCTTAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVRFGPD*RTLRCA
Trigger: AGCACACCTAAGAGTACGCCAGTCCGGCCCAAATCT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACATGAAGACAATGGCTaGTTTCTCACTGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLHEDNG*FLTGLS
Trigger: GGAGAGTCCAGTGAGAAACCAGCCATTGTCTTCATG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGCCCAACAACAGTTCTTaGATCCCGAGGAGAAAAATC +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTPNNSS*IPRRKI
Trigger: GATTTTTCTCCTCGGGATCCAAGAACTGTTGTTGGG...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTCCCTCCAAAGGCGATaGCATCGTCCACAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHSLQRR*HRPQLP
Trigger: AGGGAGCTGTGGACGATGCCATCGCCTTTGGAGGGA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATCTTTGGCAGTGGGGGTaGTGTAGGTTGGGAAGCATT +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHLWQWG*CRLGSI
Trigger: AATGCTTCCCAACCTACACCACCCCCACTGCCAAAG...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGAGGTCCTTGGAGATTaGCTCTGTATTGGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIEVLGD*LCIGSY
Trigger: ATAAGAGCCAATACAGAGCCAATCTCCAAGGACCTC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATTGCTGGCATCCCAGTTaGGGTCGATATCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHCWHPS*GRYHRW
Trigger: CCACCTATGATATCGACCCCAACTGGGATGCCAGCA...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGAGCTGTTATGATCTCTaGGGCAAGGCGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVSCYDL*GKARLV
Trigger: GACCAGTCTCGCCTTGCCCCAGAGATCATAACAGCT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGTAGGGGGAGCGGAATaGGATGCGAGGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSVGGAE*DARQVC
Trigger: GCAGACCTGCCTCGCATCCCATTCCGCTCCCCCTAC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGATGGACACAGCTCACTaGCTGAGTTCATACCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRMDTAH*LSSYQR
Trigger: TCTTTGGTATGAACTCAGCCAGTGAGCTGTGTCCAT...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTGGAGAATCAGGCAGTaGCAGCAGAGGGGAGACTAT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVWRIRQ*QQRGDY
Trigger: ATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATTTGGTGACACCACCTTaGGTCAGCTCTGTAATGGGC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLVTPP*VSSVMG
Trigger: GCCCATTACAGAGCTGACCCAAGGTGGTGTCACCAA...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAAGGCAAGACTCTTTGTaGGCTAACCAGCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLRQDSL*ANQPSF
Trigger: GAAAGAAGGCTGGTTAGCCCACAAAGAGTCTTGCCT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCAGAGCCCTGCACTCTaGCTAGAGGAGGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHQSPAL*LEEARL
Trigger: GAGTCTTGCCTCCTCTAGCCAGAGTGCAGGGCTCTG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATTCTGGCTTCCCTTATaGCACCGTTTTTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLFWLPL*HRFWSM
Trigger: CATGGACCAAAAACGGTGCCATAAGGGAAGCCAGAA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGTCAAGATAAAAAGCTaGAATAAACCCAGAGACTTT +
Preference number: 4 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRVKIKS*NKPRDF
Trigger: AAAGTCTCTGGGTTTATTCCAGCTTTTTATCTTGAC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTTTGAAGACCTTCCTCTaGAGCCTCAGTAAGTTTACT +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGLKTFL*SLSKFT
Trigger: AGTAAACTTACTGAGGCTCCAGAGGAAGGTCTTCAA...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGTTTCTGGACCAAACTaGGGGTCAGGCTGCTTATTT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLVSGPN*GSGCLF
Trigger: AAATAAGCAGCCTGACCCCCAGTTTGGTCCAGAAAC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAAGACTCGTATGGTGGTaGGGAGAACTGGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNERLVWW*GELASS
Trigger: GCTTGAAGCCAGTTCTCCCCACCACCATACGAGTCT...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGGAGGAAGGCAGGCTTaGATTCAGAGGCATGGACCC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSGGRQA*IQRHGP
Trigger: GGGTCCATGCCTCTGAATCCAAGCCTGCCTTCCTCC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 72 bp AGCTTTTGGGTCCACACCAACATGGGTTCTGTTATGTaGCTCCTCAGCAACATAAACCTCAAGTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SFWVHTNMGSVM*LLSNINLKSGS
Trigger: GCTGCCAGACTTGAGGTTTATGTTGCTGAGGAGCAACATAACAGAACCCATGTTGGTGTGGACCCAAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 72 bp GGGCAGGAAAGAAATCAAGATTCTCTGTGGCTTAGGTaGAAAGACAACACTCTGCAGGCATGGAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GQERNQDSLWLR*KDNTLQAWSCQ
Trigger: TTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGAATCTTGATTTCTTTCCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGAATTGCCCGTGTTCCTaGTGCGGTGGTTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVNCPCS*CGGCYC
Trigger: ACAGTAACAACCACCGCATCAGGAACACGGGCAATT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCACTGGCCATGGCTGCTaGCACATCCACGACAGTATA +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKITGHGC*HIHDSI
Trigger: TATACTGTCGTGGATGTGTCAGCAGCCATGGCCAGT...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCTCTGTGGTGAAGACTaGCCTCTGTTGAGACAGTTG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLCGED*PLLRQL
Trigger: CAACTGTCTCAACAGAGGTCAGTCTTCACCACAGAG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGCTTGGTCCAGTTGGTaGAATGCCTCTGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVAWSSW*NASAKG
Trigger: ACCTTTTGCAGAGGCATTTCACCAACTGGACCAAGC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCTCCTTTCGCCTCTGTaGACCAGTGATGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSLLSPL*TSDGAE
Trigger: TTCAGCGCCATCACTGGTTCACAGAGGCGAAAGGAG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGGTCGCACCTGTACATaGAGACAATGGCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVGRTCT*RQWLVS
Trigger: AGAAACCAGCCATTGTCTTCATGTACAGGTGCGACC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATGCTCTGATCCACACTaGGCTGGCCTTGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGCSDPH*AGLEQG
Trigger: ACCCTGCTCAAGGCCAGCTCAGTGTGGATCAGAGCA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATAAGAGGTCAACCTTCTaGGGAGGTCAGCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHKRSTF*GGQQSH
Trigger: ATGAGACTGCTGACCTCCTCAGAAGGTTGACCTCTT...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATCAGCCTTCTTTCCTGTaGGTCCTATATTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHQPSFL*VLYCWP
Trigger: TGGCCAGCAATATAGGACTCACAGGAAAGAAGGCTG...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTAGGGAATGTGCTGGCTaGCATGGTCAGTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSRECAG*HGQWSV
Trigger: CACAGACCACTGACCATGTCAGCCAGCACATTCCCT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCAGCCTAGGGGTTGGTaGTTCTTACGTTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHQPRGW*FLRCCS
Trigger: GGAACAACAACGTAAGAATCACCAACCCCTAGGCTG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGTTTGGAAGCAAAAGTaGCCCCCACTTAATCTGATA +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIVWKQK*PPLNLI
Trigger: TATCAGATTAAGTGGGGGTCACTTTTGCTTCCAAAC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATAAACCTGCAGCCTTCTaGGGTCTGGGAAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHKPAAF*GLGKAE
Trigger: TTCTGCTTTTCCCAGACCTCAGAAGGCTGCAGGTTT...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATTGTTGCTACCACTGCTaGCTCTTCCTGCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHCCYHC*LFLLKP
Trigger: TGGCTTAAGCAGGAAGAGTCAGCAGTGGTAGCAACA...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTACGCTCTGTTTCTGTaGCCTCCCAACCCCAACTGC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHYALFL*PPNPNC
Trigger: GCAGTTGGGGTTGGGAGGTCACAGAAACAGAGCGTA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGTCACTCAGTCAGTACTaGATCAGTTGTTATGGAGTC +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRSLSQY*ISCYGV
Trigger: GACTCCATAACAACTGATTCAGTACTGACTGAGTGA...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTGGAATTCTCAGGAATaGATCCCACGCTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVWNSQE*IPRWVM
Trigger: CATCACCCAGCGTGGGATTCATTCCTGAGAATTCCA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAAGCCATGGGTGATGGGTaGCTTCTCAGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQAMGDG*LLRVWG
Trigger: CCCCCAGACCCTGAGAAGGCACCCATCACCCATGGC...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCGAGGTTGCCCTCTCATaGGAATCTCCATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKIEVALS*ESPWPT
Trigger: TGTTGGCCATGGAGATTCGCATGAGAGGGCAACCTC...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAAGGAGACAATGTGTTTaGTCTGAAGTTGGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLRRQCV*SEVGKA
Trigger: CGCTTTGCCAACTTCAGAGCAAACACATTGTCTCCT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAACACCATGCTCTGAATaGTTCCTTGTCCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFITPCSE*FLVHKR
Trigger: TCTCTTATGGACAAGGAAGCATTCAGAGCATGGTGT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCACAGGGCCCTCGAGGTaGTCACTGGCCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSTGPSR*SLAMAA
Trigger: AGCAGCCATGGCCAGTGAGCACCTCGAGGGCCCTGT...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCTTTCTCTCTGGTGCTaGTGCTGCCCACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSLSLWC*CCPPSE
Trigger: CTCAGATGGTGGGCAGCAGCAGCACCAGAGAGAAAG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCATCAGCTGCCCGCCTaGTGCCTTCAGAGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSHQLPA*CLQSAK
Trigger: TTTTGCACTCTGAAGGCAGCAGGCGGGCAGCTGATG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGGACAGGTCTCTCCTTaGGCAAAGGCCTTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHGQVSP*AKAFPR
Trigger: CCTTGGAAAGGCCTTTGCGCAAGGAGAGACCTGTCC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGACTAGGGAGGGGAAGTaGATGGGTGACATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVTREGK*MGDMKK
Trigger: CTTCTTCATGTCACCCATGCACTTCCCCTCCCTAGT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACATCTCCTCATGCCCTaGCAGCTATTTATAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLHLLMP*QLFISS
Trigger: AGAGCTTATAAATAGCTGGCAGGGCATGAGGAGATG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCTTAGCGCAAATATGTaGCAAGGGAAGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVLSANM*QGKKGE
Trigger: CTCCCCCTTCTTCCCTTGGCACATATTTGCGCTAAG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACAAAGGGTGGCACCACTaGTGGCAGAGAGGACCTTTC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHKGWHH*WQRGPF
Trigger: GAAAGGTCCTCTCTGCCAGCAGTGGTGCCACCCTTT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTGGTGCTCTAAAATCTaGTCTAAATTTAGGATCTAC +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRWCSKI*SKFRIY
Trigger: GTAGATCCTAAATTTAGAGCAGATTTTAGAGCACCA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATCACCCAGGCTGCAGTaGAGTGGAGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGSPRLQ*SGAISA
Trigger: AGCCGAGATTGCTCCACTGCACTGCAGCCTGGGTGA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATTCCCCAGGCTGGAGTaGAGTTCACGGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGFPRLE*SSRLTV
Trigger: CACAGTGAGCCGTGAACTGCACTCCAGCCTGGGGAA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGATTATTATTGTTAAGTaGTTTCTGACTCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRIIIVK*FLTQGS
Trigger: GCTGCCTTGAGTCAGAAACCACTTAACAATAATAAT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCACTCTCCTCGCCACTaGAAAACTCTGGGTAACAGA +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHHSPRH*KTLGNR
Trigger: TCTGTTACCCAGAGTTTTCCAGTGGCGAGGAGAGTG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGTCTGGGATAAACTACTaGCTGTCTCAGAACGTGATT +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRSGINY*LSQNVI
Trigger: AATCACGTTCTGAGACAGCCAGTAGTTTATCCCAGA...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGGTGCTCACTGGCCATaGCTGCTGACACATCCACGA +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGGAHWP*LLTHPR
Trigger: TCGTGGATGTGTCAGCAGCCATGGCCAGTGAGCACC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGCCTTGGAGGAACATTTaGTCCAGTTCCACTAGTAAT +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRPWRNI*SSSTSN
Trigger: ATTACTAGTGGAACTGGACCAAATGTTCCTCCAAGG...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGGGAAAGGGAGCTGGTaGCTCACTTTGGGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGGKGSW*LTLGAS
Trigger: ACTAGCCCCCAAAGTGAGCCACCAGCTCCCTTTCCC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACCCAACAACAGTTCTTaGATCCCGAGGAGAAAAATC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLPNNSS*IPRRKI
Trigger: GATTTTTCTCCTCGGGATCCAAGAACTGTTGTTGGG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAGCCACAGTAAGACATaGAACCTCCCTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHSHSKT*NLPGDD
Trigger: GTCATCACCAGGGAGGTTCCATGTCTTACTGTGGCT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGGGCTTTTCCCATGCTaGGCCAGAGAGTCTCGCACA +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGGLFPC*ARESRT
Trigger: TGTGCGAGACTCTCTGGCCCAGCATGGGAAAAGCCC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCCCCAGAGCAGACACTaGAGGATGCCTTTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGPQSRH*RMPLAS
Trigger: AGACGCCAAAGGCATCCTCCAGTGTCTGCTCTGGGG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGTTGTCAGAGTCTACTaGGTCGTGGTAGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHVVRVY*VVVETG
Trigger: ACCAGTCTCTACCACGACCCAGTAGACTCTGACAAC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCAGCAGTCTCATCAGTaGCCTTCTTCCTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHQQSHQ*PSSSPL
Trigger: CAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTCTATCTCACATTCTTTaGCCATCACCCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGLSHIL*PSPREK
Trigger: TTTTTCTCTGGGTGATGGCCAAAGAATGTGAGATAG...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGTTATTCTTCATGAATTaGCTTCTAGGCAACCCAGTA +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQLFFMN*LLGNPV
Trigger: TACTGGGTTGCCTAGAAGCCAATTCATGAAGAATAA...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATTATGGCACCGTTTTTaGTCCATGGAATCCCCACTT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLLWHRF*SMESPL
Trigger: AAGTGGGGATTCCATGGACCAAAAACGGTGCCATAA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAACATAAACCTCAAGTCTaGCAGCCACTCTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNEHKPQV*QPLFWG
Trigger: ACCCCAGAAGAGTGGCTGCCAGACTTGAGGTTTATG...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCAGGCTGCAGTGCAGTaGAGCAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGQAAVQ*SNLGSL
Trigger: CAGTGAGCCGAGATTGCTCCACTGCACTGCAGCCTG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTGTTGGTGATTTCAGATaGCTATCATCCCAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGVGDFR*LSSQKL
Trigger: AAGCTTTTGGGATGATAGCCATCTGAAATCACCAAC...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGACAGGGAAAGGTGCTaGCCCTACAGGGAAGCTACA +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHDRERC*PYREAT
Trigger: TGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGATTTTTGTAAGAGAGTaGAACCCTACAGCTATATGC +
Preference number: 4 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQIFVRE*NPTAIC
Trigger: GCATATAGCTGTAGGGTTCCACTCTCTTACAAAAAT...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGGTGAGCCACCACACCTaGCCAATGATATATATTGTT +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTVSHHT*PMIYIV
Trigger: AACAATATATATCATTGGCCAGGTGTGGTGGCTCAC...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTCATTTCCTCTTATCTaGGGGGCAGTATCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVSFPLI*GAVSKP
Trigger: AGGCTTGGATACTGCCCCTCAGATAAGAGGAAATGA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGTTTGGAGTAGAGGATaGGCTTTTTGTCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHVWSRG*AFCLGA
Trigger: AGCCCCAAGACAAAAAGCTCATCCTCTACTCCAAAC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCAACCTTCTGAGCCACTaGGCCCCTTTTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKINLLSH*APFMLC
Trigger: ACAGAGCATAAAAGGGGCTCAGTGGCTCAGAAGGTT...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGAGCTTTAGGGCCAGATTaGGGTGTTTCTGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRALGPD*GVSGGD
Trigger: GTCTCCTCCAGAAACACCTCAATCTGGCCCTAAAGC...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGCCTCACCACTAGGCTaGGATGTAAAGAGAGATTTG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHASPLG*DVKRDL
Trigger: CAAATCTCTCTTTACATCTCAGCCTAGTGGTGAGGC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCTCCTTTCGCCTCTGTaGACCAGTGATGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGLLSPL*TSDGAE
Trigger: TTCAGCGCCATCACTGGTTCACAGAGGCGAAAGGAG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAAACACTGAGCTGGCCTTaGGCAGGGTCGCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQTLSWP*AGSHLY
Trigger: GTACAGGTGCGACCCTGCTCAAGGCCAGCTCAGTGT...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCAATGCTGTTGTGACTaGAGTGCAGCCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGQCCCD*SAAPAI
Trigger: GATGGCAGGGGCTGCACTTCAGTCACAACAGCATTG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTAATGCTGTTTGCTGCTaGGGGGACAGGTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSNAVCC*GDRSLL
Trigger: AAGGAGAGACCTGTCCCCTCAGCAGCAAACAGCATT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCTTTGGCGTCTGAAATaGGGATCCGCTCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHLWRLK*GSAQKG
Trigger: ACCCTTCTGAGCGGATCCTCATTTCAGACGCCAAAG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCTTTGGCGTCTGAAATaGGGATCCGCTCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSLWRLK*GSAQKG
Trigger: ACCCTTCTGAGCGGATCCTCATTTCAGACGCCAAAG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTACATACTCACAGTTTTaGATAAAACAAGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGTYSQF*IKQAQV
Trigger: CACCTGTGCTTGTTTTATTCAAAACTGTGAGTATGT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTAGTACTAAAAACATCTaGTATGAAGAGGTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGSTKNI*YEEVLG
Trigger: ACCAAGCACCTCTTCATATCAGATGTTTTTAGTACT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATCTGAGGGCAAATCTTaGAACTCATTGCCATATTCC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLSEGKS*NSLPYS
Trigger: GGAATATGGCAATGAGTTTCAAGATTTGCCCTCAGA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGCTTGTCTGCCTTTGTaGGGCCCCTGTGTATCACTG +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGACLPL*GPCVSL
Trigger: CAGTGATACACAGGGGCCTCACAAAGGCAGACAAGC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCCTCCTCTGCGCTGCTaGAGTGTCCACACATTAGCT +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGPPLRC*SVHTLA
Trigger: AGCTAATGTGTGGACACTTCAGCAGCGCAGAGGAGG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGTCCAAGTGCTGGGGTaGTTACCCTTAATCTTGTCT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVVQVLG*LPLILS
Trigger: AGACAAGATTAAGGGTAATCACCCCAGCACTTGGAC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTGGGGAGTGAGTTGGTaGTTTCAGATGGCTATCATC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVWGVSW*FQMAII
Trigger: GATGATAGCCATCTGAAATCACCAACTCACTCCCCA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGATTTGGGTTCTTCTGTaGCTTCTCTGTTCTCATCTA +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTIWVLL*LLCSHL
Trigger: TAGATGAGAACAGAGAAGTCACAGAAGAACCCAAAT...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATTGACCTTGGAGATCTaGAATCTCTATTACCCACCA +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLLTLEI*NLYYPP
Trigger: TGGTGGGTAATAGAGATTTCAGATCTCCAAGGTCAA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGAGGTTGCCCTCTCATaGGAATCTCCATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSEVALS*ESPWPT
Trigger: TGTTGGCCATGGAGATTCGCATGAGAGGGCAACCTC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATTGGCAAAGCGAGGTTaGCCTCTCATGCGAATCTCC +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRLAKRG*PLMRIS
Trigger: GGAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAA...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTCGGAGAGCAAGGACTaGTTTGTGGGTCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHSESKD*FVGLWN
Trigger: GTTCCAGAGACCCACAAAGCAGTCCTTGCTCTCCGA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCGACAGTATATGGCTTaGACAATGGCTGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVRQYMA*TMAVPG
Trigger: ACCTGGAACAGCCATTGTGCAAGCCATATACTGTCG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTCTGAGACTCCTGAGTaGCTTCTATTTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVSETPE*LLFWPQ
Trigger: CTGTGGCCAAAATAGAAGGCACTCAGGAGTCTCAGA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGTCTGTGGTCTGAGGTaGTTCAGCCTCACCACTAGG +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGVCGLR*FSLTTR
Trigger: CCTAGTGGTGAGGCTGAAGCACCTCAGACCACAGAC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCTGAAGTGCAGCCCCTaGCATCTTGCTTCCCAACAA +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHLKCSP*HLASQQ
Trigger: TTGTTGGGAAGCAAGATGGCAGGGGCTGCACTTCAG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATTGGGCTGTCGTGGCTaGTTGGGAGGTATCATGGCT +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGLGCRG*LGGIMA
Trigger: AGCCATGATACCTCCCAAGCAGCCACGACAGCCCAA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAATGGTTAAGCTGGAAATaGTGTTTGCTGCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNEWLSWK*CLLLRG
Trigger: TCCCCTCAGCAGCAAACAGCATTTCCAGCTTAACCA...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGAGGCAAGGAGTTATGTaGACATGTTCTATGCTAAGA +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTRQGVM*TCSMLR
Trigger: TCTTAGCATAGAACATGTGCACATAACTCCTTGCCT...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGTGATCTTGGCTCACTaGAACCTTTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSVILAH*NLCLLG
Trigger: ACCCAGGAGGCAAAGGTTGCAGTGAGCCAAGATCAC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACTTAAAAACAGCATCTaGAAATTCCAGAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFILKNSI*KFQSAC
Trigger: GCAAGCACTCTGGAATTTGCAGATGCTGTTTTTAAG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTACAAGAGATAAAACATaGATTGACTTGGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAATRDKT*IDLAFF
Trigger: GAAGAATGCCAAGTCAATGCATGTTTTATCTCTTGT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGTTTTCACATTGCCATaGGTGATGGGTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHVFTLP*VMGAFS
Trigger: TGAGAAGGCACCCATCACCCATGGCAATGTGAAAAC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAGTTTTCACATTGCCATaGGTGATGGGTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNEVFTLP*VMGAFS
Trigger: TGAGAAGGCACCCATCACCCATGGCAATGTGAAAAC...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATCTGGGATAAACTACTaGCTGTCTCAGAACGTGATT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLSGINY*LSQNVI
Trigger: AATCACGTTCTGAGACAGCCAGTAGTTTATCCCAGA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGCAAGGACTGCTTTGTaGGTCTCTGGAACTTTTATT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLARTAL*VSGTFI
Trigger: AATAAAAGTTCCAGAGACCCACAAAGCAGTCCTTGC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGGAAGTCCATACTTCTTaGTATCGAATTGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQREVHTS*YRIALD
Trigger: ATCCAGTGCAATTCGATACCAAGAAGTATGGACTTC...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAACTCCGAGCATAAGTTaGCTCGTCATGAATGATAAT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFITPSIS*LVMNDN
Trigger: ATTATCATTCATGACGAGCCAACTTATGCTCGGAGT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCCTATTTCACCCACATGCTAAATAACTATAAATTGCTTGCTTACCACCCTCCAAGAAGAAGTAGAGCGTaGCGGGGGAAAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SYFTHMLNNYKLLAYHPPRRSRA*RGKGSW
Trigger: CCAGCTCCCTTTCCCCCGCCACGCTCTACTTCTTCT...TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAGCATGTGGGTGAAATAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGTGATGGCGCTGAACTaGAGGAGGAGGCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSVMALN*RRRQHV
Trigger: CACATGCTGCCTCCTCCTCCAGTTCAGCGCCATCAC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCGTGATGGCGCTGAACTaGAGGAGGAGGCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLVMALN*RRRQHV
Trigger: CACATGCTGCCTCCTCCTCCAGTTCAGCGCCATCAC...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCATGAAGACAATGGCTaGTTTCTCACTGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVHEDNG*FLTGLS
Trigger: GGAGAGTCCAGTGAGAAACCAGCCATTGTCTTCATG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATTATGATCATCTTCTTTaGCAGTGGGGGTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHYDHLL*QWGWCR
Trigger: CCTACACCACCCCCACTGCCAAAGAAGATGATCATA...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTAAGAACCAGCACTGCTaGCATCCCAGTTGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGKNQHC*HPSWGR
Trigger: TCGACCCCAACTGGGATGCCAGCAGTGCTGGTTCTT...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTACTCCAAAACGGAGCTaGTCTTTCTGCCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSTPKRS*SFCPAM
Trigger: CATGGCTGGGCAGAAAGACCAGCTCCGTTTTGGAGT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCTTTTCAGGGTCATCTaGATCCTCCCAGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSLFRVI*ILPGKQ
Trigger: CTGCTTCCCTGGGAGGATCCAGATGACCCTGAAAAG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGTGATGACCACAACGTaGCTCCTCTGCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSVMTTT*LLCFLL
Trigger: GAGCAAGAAGCAGAGGAGCCACGTTGTGGTCATCAC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTTCACACTTTTTATACTaGGTAGCTGTTATGATCTCT +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAASHFLY*VAVMIS
Trigger: AGAGATCATAACAGCTACCCAGTATAAAAAGTGTGA...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTCTCATCAAAGGGGTTaGGTAGGTGCAGCATCTCAT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVSHQRG*VGAASH
Trigger: ATGAGATGCTGCACCTACCCAACCCCTTTGATGAGA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCAGGCGGTGAAAGTCTaGAAGAGATCTTCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSQAVKV*KRSSRG
Trigger: CCCCCGCGAAGATCTCTTCCAGACTTTCACCGCCTG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATATGTCTAGCCAGTTTTaGAGCAGGGTGTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHMSSQF*SRVFLC
Trigger: ACAGAGGAACACCCTGCTCCAAAACTGGCTAGACAT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACTTTCTACTCTCTCCTaGAACAAAAGATATAGTCCC +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFILSTLS*NKRYSP
Trigger: GGGACTATATCTTTTGTTCCAGGAGAGAGTAGAAAG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGAAATCCAAACTTCACTaGCAAGTGGGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVKSKLH*QVGTEW
Trigger: CCACTCTGTCCCCACTTGCCAGTGAAGTTTGGATTT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAACATTGAAATTTACATaGGCAAGGCACCACGAACAT +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFITLKFT*ARHHEH
Trigger: ATGTTCGTGGTGCCTTGCCCATGTAAATTTCAATGT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGTAAGCACGGACAGCTaGACTTCAGTGCGCACTTCA +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHVSTDS*TSVRTS
Trigger: TGAAGTGCGCACTGAAGTCCAGCTGTCCGTGCTTAC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTACAACCCCAGGCAATaGAGAGCTCCCCACACCAAT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSYNPRQ*RAPHTN
Trigger: ATTGGTGTGGGGAGCTCTCCATTGCCTGGGGTTGTA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCTTTGTTCCCCAGGCTaGAGTGCAGTTCACGGCTCA +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGLCSPG*SAVHGS
Trigger: TGAGCCGTGAACTGCACTCCAGCCTGGGGAACAAAG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTAGATATTTGGAAAGCTaGAGAAATTGCCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: CILSGLQVFLDQTGGQAARYLES*RNCHSK
Trigger: TTTTGAGTGGCAATTTCTCCAGCTTTCCAAATATCT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTGGGTCTTTCCAAGATaGATGTCCTTTCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVWVFPR*MSFLPC
Trigger: GCAAGGAAGAAAGGACATTCATCTTGGAAAGACCCA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGTAGGTGCTGATTTGTaGCAGTTTTTCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVVGADL*QFFLGG
Trigger: TCCTCCAAGGAAAAACTGTCACAAATCAGCACCTAC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGACTCTGTGGTGAAGACTaGCCTCTGTTGAGACAGTTG +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRLCGED*PLLRQL
Trigger: CAACTGTCTCAACAGAGGTCAGTCTTCACCACAGAG...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGCTTGGTCCAGTTGGTaGAATGCCTCTGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHAWSSW*NASAKG
Trigger: ACCTTTTGCAGAGGCATTTCACCAACTGGACCAAGC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGGAAGAAGCTTTTAAATaGTATCCAGCGCTTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTEEAFK*YPALRF
Trigger: AAACCTAAGCGCTGGATATCATTTAAAAGCTTCTTC...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAATGCTCTGATCCACACTaGGCTGGCCTTGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQCSDPH*AGLEQG
Trigger: ACCCTGCTCAAGGCCAGCTCAGTGTGGATCAGAGCA...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTGGGACAATGCTGTTGTaGCTGAAGTGCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPGTMLL*LKCSPC
Trigger: GCAGGGGCTGCACTTCAGTCACAACAGCATTGTCCC...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGCAAGTTTGTGCAGCTaGATTTCTGTAAAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIASLCS*ISVKLR
Trigger: TCTTAACTTTACAGAAATTCAGCTGCACAAACTTGC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATGTTCTATGCTAAGATaGACCAAACACCAACCTTCA +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLCSMLR*TKHQPS
Trigger: TGAAGGTTGGTGTTTGGTTCATCTTAGCATAGAACA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAGCACAGGAGGCTTCTTaGAGTTCTAGTCCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNEAQEAS*SSSPLY
Trigger: ATAAAGAGGACTAGAACTTCAAGAAGCCTCCTGTGC...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGACATGGAATGTATGTaGACTCCCCTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHDMECM*TPLPQH
Trigger: ATGCTGTGGGAGGGGAGTTCACATACATTCCATGTC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACACCAAACCATGGGGGTaGATGGGACACGTCAAGATA +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHTKPWG*MGHVKI
Trigger: TATCTTGACGTGTCCCATTCACCCCCATGGTTTGGT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGATTTACACAGTAACATaGTGCCACGGAGTACACAGC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVIYTVT*CHGVHS
Trigger: GCTGTGTACTCCGTGGCATCATGTTACTGTGTAAAT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTGAATCCCACGCTGGGTaGTGTGATGGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPESHAG*CDGEGE
Trigger: TTCCCCTTCCCCATCACATCACCCAGCGTGGGATTC...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTCATCCCAACTCTCGTaGTCCTCCTCCATGTTACTG +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHSSQLS*SSSMLL
Trigger: CAGTAACATGGAGGAGGAGCACGAGAGTTGGGATGA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TCCTATTTCACCCACATGCTAAATAACTATAAATTGCTTGCTTACCACCCTCCAGTCTGTGGTCTGAGGTaGTTCAGCCTCACCACTAGG +
Preference number: 4 (lower is better)
Translates to: SYFTHMLNNYKLLAYHPPVCGLR*FSLTTR
Trigger: CCTAGTGGTGAGGCTGAAGCACCTCAGACCACAGAC...TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAGCATGTGGGTGAAATAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCTGCTGCCTTCAGAGTaGAAAACTGATTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVLLPSE*KTDSAS
Trigger: AGAAGCTGAATCAGTTTTGCACTCTGAAGGCAGCAG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACAGCTGCCCGCCTGCTaGCTTCAGAGTGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQQLPAC*LQSAKL
Trigger: CAGTTTTGCACTCTGAAGGCAGCAGGCGGGCAGCTG...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCCCAGCGCTTAGGTTTTaGATCAGCTGCCCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCPALRF*ISCPPA
Trigger: AGCAGGCGGGCAGCTGATGCAAAACCTAAGCGCTGG...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAACAACGTGGCTCCTCTaGTTCTTGCTCATGACTCCC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGTTWLL*FLLMTP
Trigger: GGGAGTCATGAGCAAGAAGCAGAGGAGCCACGTTGT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCAGCCCACCTCACTGTaGCCTCTAAAGGAGATCTTA +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSQPTSL*PLKEIL
Trigger: TAAGATCTCCTTTAGAGGGCACAGTGAGGTGGGCTG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAAGGGGAGCACAGGCTaGACACATGGTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSKGSTG*THGEQL
Trigger: GAGCTGTTCACCATGTGTGCAGCCTGTGCTCCCCTT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTACACCAAGAGCAGACTaGTGGCCTGCAGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPTPRAD*WPAAAC
Trigger: GCATGCTGCTGCAGGCCAGCAGTCTGCTCTTGGTGT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATCAAGTTATCATGAGTaGGGACACACACATACTATC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLSSYHE*GHTHTI
Trigger: GATAGTATGTGTGTGTCCGCACTCATGATAACTTGA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACATGCCAAAATGCCCTaGATATCCTCAACAGAAAAT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLHAKMP*ISSTEN
Trigger: ATTTTCTGTTGAGGATATGCAGGGCATTTTGGCATG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCAACAACTTGTGATCTaGCAACTGCAGTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVQQLVI*QLQFLA
Trigger: AGCCAAGAACTGCAGTTGGCAGATCACAAGTTGTTG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTACTCAGCTTTCTGGTTaGTTCCATGCAGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSTQLSG*FHAAPR
Trigger: TCTGGGAGCTGCATGGAAGCAACCAGAAAGCTGAGT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCTCACTCACACTCTCTaGCCACATCAGGAAGCACTC +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGLTHTL*PHQEAL
Trigger: GAGTGCTTCCTGATGTGGGCAGAGAGTGTGAGTGAG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCGGTGCTCACTGGCCATaGCTGCTGACACATCCACGA +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCGAHWP*LLTHPR
Trigger: TCGTGGATGTGTCAGCAGCCATGGCCAGTGAGCACC...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGAGCAACATCAGCATCTaGAGGAATGGCATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVSNISI*RNGIKL
Trigger: GAGCTTTATGCCATTCCTCCAGATGCTGATGTTGCT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGCTGGTGGCTCACTTTaGGGGCTAGTCACTAATTTG +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSAGGSL*GLVTNL
Trigger: CAAATTAGTGACTAGCCCCCAAAGTGAGCCACCAGC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTCCATGACTGCTGCCTaGTCTGTCCTAGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSSMTAA*SVLALL
Trigger: GAGCAAGGCTAGGACAGACCAGGCAGCAGTCATGGA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCTCCATGACTGCTGCCTaGTCTGTCCTAGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLSMTAA*SVLALL
Trigger: GAGCAAGGCTAGGACAGACCAGGCAGCAGTCATGGA...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTCCCTTGGGCTGTCGTaGCTGCTTGGGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSSLGLS*LLGRYH
Trigger: ATGATACCTCCCAAGCAGCCACGACAGCCCAAGGGA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCTTTCCATGGATTTTTaGAGGTCCTTGGAGATTGGC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLSMDF*RSLEIG
Trigger: GCCAATCTCCAAGGACCTCCAAAAATCCATGGAAAG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAAGAACCAGCACTGCTaGCATCCCAGTTGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSKNQHC*HPSWGR
Trigger: TCGACCCCAACTGGGATGCCAGCAGTGCTGGTTCTT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACTTTTCAGGGTCATCTaGATCCTCCCAGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGLFRVI*ILPGKQ
Trigger: CTGCTTCCCTGGGAGGATCCAGATGACCCTGAAAAG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATTTCAGAACAGGGCTTTaGGTTTTTCCCATCCGTTTC +
Preference number: 4 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHFRTGL*VFPIRF
Trigger: GAAACGGATGGGAAAAACCCAAAGCCCTGTTCTGAA...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGTGATGACCACAACGTaGCTCCTCTGCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGVMTTT*LLCFLL
Trigger: GAGCAAGAAGCAGAGGAGCCACGTTGTGGTCATCAC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACAGCCACAGTAAGACATaGAACCTCCCTGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHSHSKT*NLPGDD
Trigger: GTCATCACCAGGGAGGTTCCATGTCTTACTGTGGCT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCAGCAGTCTCATCAGTaGCCTTCTTCCTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSQQSHQ*PSSSPL
Trigger: CAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGTTAAGGGAATGTGCTaGCTGACATGGTCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSVKGMC*LTWSVV
Trigger: GACCACTGACCATGTCAGCCAGCACATTCCCTTAAC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTCATTGCCATATTCCTaGCTTCCAGTTCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVSLPYS*LPVLAQ
Trigger: CTGAGCTAGAACTGGAAGCCAGGAATATGGCAATGA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGTGAGCCACTGCGCCTaGCCTGGGAACTTCATACTA +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSVSHCA*PGNFIL
Trigger: TAGTATGAAGTTCCCAGGCCAGGCGCAGTGGCTCAC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACAAAACATGCCAGGGTTaGCCCAGCAAGTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHKTCQG*PSKSSL
Trigger: CAAACTGGACTTGCTGGGCCAACCCTGGCATGTTTT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAATAAAGCTAATAACTTaGTTTTGTGGGCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLIKLIT*FCGQPS
Trigger: GGATGGCTGCCCACAAAACCAAGTTATTAGCTTTAT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCTCGGCACAGCACTTTaGGCCTTTGAGAATATGAGC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHLGTAL*AFENMS
Trigger: GCTCATATTCTCAAAGGCCCAAAGTGCTGTGCCGAG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTGGAATCCCCACTTTTaGCACTGCTGTAAGCACGGA +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSWNPHF*HCCKHG
Trigger: TCCGTGCTTACAGCAGTGCCAAAAGTGGGGATTCCA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTTATGGCACCGTTTTTaGTCCATGGAATCCCCACTT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVLWHRF*SMESPL
Trigger: AAGTGGGGATTCCATGGACCAAAAACGGTGCCATAA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCGGTGGTTGTTACTGTaGTTGGCATTAGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVRWLLL*LALVFT
Trigger: TGTGAAAACTAATGCCAATCACAGTAACAACCACCG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTTGTTAAGTGGTTTCTaGCTCAAGGCAGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVLLSGF*LKAALF
Trigger: AAACAGAGCTGCCTTGAGTCAGAAACCACTTAACAA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATTCAGACAAATTAGGTaGCTTAACAGGGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLFRQIR*LNRDGF
Trigger: AAAACCATCCCTGTTAAGTCACCTAATTTGTCTGAA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCATTGAAGCCACAATCTaGGAAAGCACTGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKIIEATI*ESTVLA
Trigger: AGCAAGCACAGTGCTTTCTCAGATTGTGGCTTCAAT...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGCTTTAGGGCCAGATTaGGGTGTTTCTGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSALGPD*GVSGGD
Trigger: GTCTCCTCCAGAAACACCTCAATCTGGCCCTAAAGC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCGGAGGAGGCAGCATGTaGATGACTGTGCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSGGGSM*MTVPSR
Trigger: CCTGGATGGCACAGTCATTCACATGCTGCCTCCTCC...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCTCTTCTGCTTGGCCTaGGAGAAGTTGCTCACTATA +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSLFCLA*EKLLTI
Trigger: TATAGTGAGCAACTTCTCTCAGGCCAAGCAGAAGAG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGATGCCTTTGGCGTCTaGAATGAGGATCCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSDAFGV*NEDPLR
Trigger: TCTGAGCGGATCCTCATTTCAGACGCCAAAGGCATC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGCAAGTTTGTGCAGCTaGATTTCTGTAAAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLASLCS*ISVKLR
Trigger: TCTTAACTTTACAGAAATTCAGCTGCACAAACTTGC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGCTATTTATAAGCTCTaGACTGCACTCCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSAIYKL*TALHPA
Trigger: AGCAGGGTGGAGTGCAGTTCAGAGCTTATAAATAGC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAATCTGAGGGCAAATCTTaGAACTCATTGCCATATTCC +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNESEGKS*NSLPYS
Trigger: GGAATATGGCAATGAGTTTCAAGATTTGCCCTCAGA...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTGACATGGAATGTATGTaGACTCCCCTCCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGDMECM*TPLPQH
Trigger: ATGCTGTGGGAGGGGAGTTCACATACATTCCATGTC...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTATGATGTTCTCAAGCTaGGGTTTGGGCAATAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSMMFSS*GLGNSH
Trigger: GTGGCTATTGCCCAAACCTCAGCTTGAGAACATCAT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGACATTCAAGTTATCATaGGTGCGGACACACACATAC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVTFKLS*VRTHTY
Trigger: GTATGTGTGTGTCCGCACTCATGATAACTTGAATGT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCTGATGATACTGGGGTaGCAGCTAGAGAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSLMILG*QLESEG
Trigger: TCCCTCACTCTCTAGCTGTCACCCCAGTATCATCAG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAATGTCCTTTCTTCCTTaGCTCTCATTCCTTAATTTC +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLMSFLP*LSFLNF
Trigger: GAAATTAAGGAATGAGAGGCAAGGAAGAAAGGACAT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATTCTGGGGGAAGCTGGTaGAAACTTTTAGGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHSGGSW*KLLGLK
Trigger: CTTTAAACCTAAAAGTTTGCACCAGCTTCCCCCAGA...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATCATCCCAACTCTCGTaGTCCTCCTCCATGTTACTG +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGSSQLS*SSSMLL
Trigger: CAGTAACATGGAGGAGGAGCACGAGAGTTGGGATGA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTTGGCAAAGCGAGGTTaGCCTCTCATGCGAATCTCC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSLAKRG*PLMRIS
Trigger: GGAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCGGCTCTCTGGATCTTTaGTGGGGAGCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSGSLDL*WGAVAG
Trigger: TCCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCC...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATCTCTGGTGCTGCTGCTaGCCACCATCTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYLWCCC*PPSETP
Trigger: AGGAGTCTCAGATGGTGGGCAGCAGCAGCACCAGAG...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCCTTTCTCTCTGGTGCTaGTGCTGCCCACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSLSLWC*CCPPSE
Trigger: CTCAGATGGTGGGCAGCAGCAGCACCAGAGAGAAAG...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCCTGCTGCCTTCAGAGTaGAAAACTGATTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKILLPSE*KTDSAS
Trigger: AGAAGCTGAATCAGTTTTGCACTCTGAAGGCAGCAG...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCCATCAGCTGCCCGCCTaGTGCCTTCAGAGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCHQLPA*CLQSAK
Trigger: TTTTGCACTCTGAAGGCAGCAGGCGGGCAGCTGATG...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCAGGTTTTGCATCAGCTaGCCGCCTGCTGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCRFCIS*PPAAFR
Trigger: TCTGAAGGCAGCAGGCGGGCAGCTGATGCAAAACCT...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAAACCCTTCTCCATGACTaGTGCCTGGTCTGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQTLLHD*CLVCPS
Trigger: GCTAGGACAGACCAGGCAGCAGTCATGGAGAAGGGT...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTACCCTTCTCCATGACTaGTGCCTGGTCTGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPTLLHD*CLVCPS
Trigger: GCTAGGACAGACCAGGCAGCAGTCATGGAGAAGGGT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACAGCCCCTGCCATCTTaGTTCCCAACAACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGQPLPS*FPTTVL
Trigger: AAGAACTGTTGTTGGGAAGCAAGATGGCAGGGGCTG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGTAAACCGCATCACCTaGCTCACAACATGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSVNRIT*LTTWFV
Trigger: GACAAACCATGTTGTGAGGCAGGTGATGCGGTTTAC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCACAACGTGGCTCCTCTaGTTCTTGCTCATGACTCCC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSTTWLL*FLLMTP
Trigger: GGGAGTCATGAGCAAGAAGCAGAGGAGCCACGTTGT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAACTAGGGAGGGGAAGTaGATGGGTGACATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGTREGK*MGDMKK
Trigger: CTTCTTCATGTCACCCATGCACTTCCCCTCCCTAGT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCTGTCCTCCATGCAGTaGACATACTTACAGATAATG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVLSSMQ*TYLQIM
Trigger: CATTATCTGTAAGTATGTGCACTGCATGGAGGACAG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAATGGCCCCTAGAGAATTaGACATGCAAGAAAATCATC +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNEWPLEN*TCKKII
Trigger: GATGATTTTCTTGCATGTGCAATTCTCTAGGGGCCA...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGAGCTGGCCAATTACTaGTCGGGGAAAACTGCAAAT +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHELANY*SGKTAN
Trigger: ATTTGCAGTTTTCCCCGAGCAGTAATTGGCCAGCTC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAAGGTATATCTCAATATaGAAGACATTGCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLRYISI*KTLQDG
Trigger: CCCATCTTGCAATGTCTTGCATATTGAGATATACCT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGTGATCTTGGCTCACTaGAACCTTTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSVILAH*NLCLLG
Trigger: ACCCAGGAGGCAAAGGTTGCAGTGAGCCAAGATCAC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTGCCTCATGCCAAAATaGCCTGCATATCCTCAACAG +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHCLMPK*PAYPQQ
Trigger: CTGTTGAGGATATGCAGGGCATTTTGGCATGAGGCA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAAGACATAACCATGTCTaGAACCAAACCCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGRHNHV*NQTLPS
Trigger: GCTGGGGAGGGTTTGGTTGCAGACATGGTTATGTCT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCAGGAACGATGCGGGTaGAGAGAATTTCAATGCATG +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHQERCG*REFQCM
Trigger: CATGCATTGAAATTCTCTGCACCCGCATCGTTCCTG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTTCTCACAGTGTTCTTaGATGCTAAGCTCACCACAT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVFSQCS*MLSSPH
Trigger: ATGTGGTGAGCTTAGCATCCAAGAACACTGTGAGAA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCGCCACTGGAAAACTCTaGGTAACAGAACCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSATGKL*VTEPAP
Trigger: GGGGGCCGGTTCTGTTACCCAGAGTTTTCCAGTGGC...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAAGGGACTTTCATAATTaGGCTCAATTTCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLRDFHN*AQFPSC
Trigger: ACATGAAGGAAATTGAGCCCAATTATGAAAGTCCCT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTTGCTTGCTCTTCTGTaGGGACAAGGTTTATGGTTA +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVLLALL*GQGLWL
Trigger: TAACCATAAACCTTGTCCCCACAGAAGAGCAAGCAA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCCCTCGAGGTGCTCACTaGCCATGGCTGCTGACACAT +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSPRGAH*PWLLTH
Trigger: ATGTGTCAGCAGCCATGGCCAGTGAGCACCTCGAGG...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGGTATCGAATTGCACTaGATTTTTGGAAATGGGCAC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVGIELH*IFGNGH
Trigger: GTGCCCATTTCCAAAAATCCAGTGCAATTCGATACC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCCTTGGAGGAACATTTaGTCCAGTTCCACTAGTAAT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVPWRNI*SSSTSN
Trigger: ATTACTAGTGGAACTGGACCAAATGTTCCTCCAAGG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TCCTATTTCACCCACATGCTAAATAACTATAAATTGCTTGCTTACCACCCTCCATCTCTGGATCTTTGCTaGGGAGCTGTGGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: SYFTHMLNNYKLLAYHPPSLDLC*GAVAGT
Trigger: AGTTCCAGCCACAGCTCCCCAGCAAAGATCCAGAGA...TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAGCATGTGGGTGAAATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGACAGCATCTGGAGGAATaGCATAAAGCTCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRQHLEE*HKALPH
Trigger: GTGTGGAAGAGCTTTATGCCATTCCTCCAGATGCTG...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCAGATTTGGGCCGGACTaGCGTACTCTTAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLRFGPD*RTLRCA
Trigger: AGCACACCTAAGAGTACGCCAGTCCGGCCCAAATCT...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCGGGAGAGGGGGTGACTaGCTTTATGGATGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLGRGGD*LYGWVF
Trigger: AAAGACCCATCCATAAAGCCAGTCACCCCCTCTCCC...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATGGGAAAGGGAGCTGGTaGCTCACTTTGGGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYGKGSW*LTLGAS
Trigger: ACTAGCCCCCAAAGTGAGCCACCAGCTCCCTTTCCC...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCCCTGGTAGGGCTGGTTaGCTTGGTCCAGTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCPGRAG*LGPVGE
Trigger: TTCACCAACTGGACCAAGCCAACCAGCCCTACCAGG...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTCCTGGTAGGGCTGGTTaGCTTGGTCCAGTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPPGRAG*LGPVGE
Trigger: TTCACCAACTGGACCAAGCCAACCAGCCCTACCAGG...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGATTTTTGGAGGTCCTTaGAGATTGGCTCTGTATTGG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVIFGGP*RLALYW
Trigger: CCAATACAGAGCCAATCTCCAAGGACCTCCAAAAAT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACACACACAACCCCAGTaGAAGGAACGCTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGHTQPQ*KERSSL
Trigger: AAGAGATGAGCGTTCCTTCCACTGGGGTTGTGTGTG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCCACTGCGCCTGGCCTaGGAACTTCATACTACTAGA +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSPLRLA*ELHTTR
Trigger: TCTAGTAGTATGAAGTTCCCAGGCCAGGCGCAGTGG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGTTCACTCATTAGGCTaGAGCGGAATTTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHVHSLG*SGIFNP
Trigger: AGGATTGAAAATTCCGCTCCAGCCTAATGAGTGAAC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATGGAATCCCCACTTTTaGCACTGCTGTAAGCACGGA +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGWNPHF*HCCKHG
Trigger: TCCGTGCTTACAGCAGTGCCAAAAGTGGGGATTCCA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAGTACAGAGGTTTATCTaGGATCTCAAGGAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNEVQRFI*DLKEVS
Trigger: ACTGACTTCCTTGAGATCCCAGATAAACCTCTGTAC...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 72 bp TCTGTAACCAGTTACAGGGAGAAGGCCTCGAAGTTATaGCCAGATCAACTCAAAATTACGGTTTCCCACATC +
Preference number: 4 (lower is better)
Translates to: SVTSYREKASKL*PDQLKITVSHI
Trigger: GATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCGAGGCCTTCTCCCTGTAACTGGTTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTCACATTGCCATGGGTaGTGGGTGCCTTCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYSHCHG*WVPSQG
Trigger: ACCCTGAGAAGGCACCCATCACCCATGGCAATGTGA...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGACCTCCTCCATGTTACTaGAAAGTACATCCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRPPPCY*KVHPLH
Trigger: GTGAAGAGGATGTACTTTTCAGTAACATGGAGGAGG...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAACCTTCTGAGCCACTaGGCCCCTTTTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSNLLSH*APFMLC
Trigger: ACAGAGCATAAAAGGGGCTCAGTGGCTCAGAAGGTT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACATTGAAGCCACAATCTaGGAAAGCACTGTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHIEATI*ESTVLA
Trigger: AGCAAGCACAGTGCTTTCTCAGATTGTGGCTTCAAT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCTGTGGGGGTTGGATTaGAGCCACAATCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSLWGLD*SHNLRK
Trigger: CTTTCTCAGATTGTGGCTTCAATCCAACCCCCACAG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATCTCCTTTCGCCTCTGTaGACCAGTGATGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYLLSPL*TSDGAE
Trigger: TTCAGCGCCATCACTGGTTCACAGAGGCGAAAGGAG...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCGGTCGCACCTGTACATaGAGACAATGGCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLGRTCT*RQWLVS
Trigger: AGAAACCAGCCATTGTCTTCATGTACAGGTGCGACC...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACTCTTCTGCTTGGCCTaGGAGAAGTTGCTCACTATA +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGLFCLA*EKLLTI
Trigger: TATAGTGAGCAACTTCTCTCAGGCCAAGCAGAAGAG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTTTTTGCTCTATCTTTaGCTCCAGCTCAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSFLLYL*LQLKCG
Trigger: CCCACACTTGAGCTGGAGTCAAAGATAGAGCAAAAA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTAGGACTTTACAACCCTaGTTTACCATGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGRTLQP*FTMTGW
Trigger: CCACCCTGTCATGGTAAATCAGGGTTGTAAAGTCCT...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTGGCTCAGAGAATGGCTaGGGACACAGTTTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPGSENG*GHSLSE
Trigger: CTCTGACAAACTGTGTCCTCAGCCATTCTCTGAGCC...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTCACCACATATACTTTaGCCATCTGCCACTATCATA +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVSPHIL*PSATII
Trigger: TATGATAGTGGCAGATGGGCAAAGTATATGTGGTGA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCACACCATGCTCTGAATaGTTCCTTGTCCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKITPCSE*FLVHKR
Trigger: TCTCTTATGGACAAGGAAGCATTCAGAGCATGGTGT...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAATCGGAGAGCAAGGACTaGTTTGTGGGTCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQSESKD*FVGLWN
Trigger: GTTCCAGAGACCCACAAAGCAGTCCTTGCTCTCCGA...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATTCTTGGTATCGAATTaGACTGGATTTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLFLVSN*TGFLEM
Trigger: CATTTCCAAAAATCCAGTGCAATTCGATACCAAGAA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTTCTGAGACTCCTGAGTaGCTTCTATTTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGSETPE*LLFWPQ
Trigger: CTGTGGCCAAAATAGAAGGCACTCAGGAGTCTCAGA...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTTGGTGAAATGCCTCTaGAAAAGGTTACCTGCATGG +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHLVKCL*KRLPAW
Trigger: CCATGCAGGTAACCTTTTGCAGAGGCATTTCACCAA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTTGGTGAAATGCCTCTaGAAAAGGTTACCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSLVKCL*KRLPAW
Trigger: CCATGCAGGTAACCTTTTGCAGAGGCATTTCACCAA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCCATGACTGCTaGCTGGTCTGTCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQLLHDC*LVCPSL
Trigger: AAGGCTAGGACAGACCAGGCAGCAGTCATGGAGAAG...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCAGCCCCTGCCATCTTaGTTCCCAACAACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSQPLPS*FPTTVL
Trigger: AAGAACTGTTGTTGGGAAGCAAGATGGCAGGGGCTG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTAAGTCCTCGATAAAGTaGTTGTCTCTGCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGKSSIK*LSLRLL
Trigger: CAGAAGCCGCAGAGACAAGCACTTTATCGAGGACTT...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTGTAAACCGCATCACCTaGCTCACAACATGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGVNRIT*LTTWFV
Trigger: GACAAACCATGTTGTGAGGCAGGTGATGCGGTTTAC...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATTGCTTGGTTTACCAGTaGTGTAAGATAATGGTAGTG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHCLVYQ*CKIMVV
Trigger: CACTACCATTATCTTACAGCACTGGTAAACCAAGCA...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCACAGAGATTGTTCATaGTCATGTGGCTTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVHRDCS*SCGLRK
Trigger: TTTCCTTAAGCCACATGAGCATGAACAATCTCTGTG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACTGCAAATTCCAGAGTaGTTGCTAGTGGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGLQIPE*LLVEKS
Trigger: GCTCTTCTCCACTAGCAAGCACTCTGGAATTTGCAG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGAAAGCTGGAGAAATTaGCACTCAAAAGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSESWRN*HSKAAS
Trigger: GCTTGCAGCTTTTGAGTGGCAATTTCTCCAGCTTTC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCGCAAGGACTGCTTTGTaGGTCTCTGGAACTTTTATT +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKIARTAL*VSGTFI
Trigger: AATAAAAGTTCCAGAGACCCACAAAGCAGTCCTTGC...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCTGGATTTTTGGAAATaGGCACTTATTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLDFWK*ALICPG
Trigger: ACCAGGACAAATAAGTGCCCATTTCCAAAAATCCAG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGAAGTCCATACTTCTTaGTATCGAATTGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVEVHTS*YRIALD
Trigger: ATCCAGTGCAATTCGATACCAAGAAGTATGGACTTC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGAAGGTATCTTTTGTCGTaGACTGGTGCTAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRRYLLS*TGARSP
Trigger: TGGACTTCTAGCACCAGTCCACGACAAAAGATACCT...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCCCTTGGAGGAACATTTaGTCCAGTTCCACTAGTAAT +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKIPWRNI*SSSTSN
Trigger: ATTACTAGTGGAACTGGACCAAATGTTCCTCCAAGG...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp TCCTATTTCACCCACATGCTAAATAACTATAAATTGCTTGCTTACCACCCTCCAGAGTGCCTTCTATTTTaGCCACAGGCTCTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SYFTHMLNNYKLLAYHPPECLLF*PQALEW
Trigger: CCACTCAAGAGCCTGTGGCCAAAATAGAAGGCACTC...TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAGCATGTGGGTGAAATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGAAGCAACATCAGCATCTaGAGGAATGGCATAAAGCTC +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRSNISI*RNGIKL
Trigger: GAGCTTTATGCCATTCCTCCAGATGCTGATGTTGCT...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCGACTGGCTTTATGGATaGGTCTTTCTGTACTTTGGT +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKIDWLYG*VFLYFG
Trigger: ACCAAAGTACAGAAAGACCCATCCATAAAGCCAGTC...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAAAGACTACTTTCCATaGATTTTTGGAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHKDYFP*IFGGPW
Trigger: CCAAGGACCTCCAAAAATCCATGGAAAGTAGTCTTT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCATCCGTTTCTCCTTTaGCGTCTTCTTCAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHHPFLL*RLLQSL
Trigger: AAGAGACTGAAGAAGACGCCAAAGGAGAAACGGATG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCATCCGTTTCTCCTTTaGCGTCTTCTTCAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSHPFLL*RLLQSL
Trigger: AAGAGACTGAAGAAGACGCCAAAGGAGAAACGGATG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCAAGACATTGCAAGATaGGAGGTGGGGGAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSQDIAR*EVGEVK
Trigger: CTTAACCTCCCCCACCTCCCATCTTGCAATGTCTTG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGCACCTTGTACCTTCTaGGCACTTACAGATATTAAA +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVAPCTF*ALTDIK
Trigger: TTTAATATCTGTAAGTGCCCAGAAGGTACAAGGTGC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGGGTCCACACCAACATaGGTTCTGTTATGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSGSTPT*VLLCCS
Trigger: GGAGCAACATAACAGAACCCATGTTGGTGTGGACCC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATATTGTACCAGCACATTaGATAAACTTCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHIVPAH*INFLPF
Trigger: GAAGGGAAGGAAGTTTATCCAATGTGCTGGTACAAT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCCAAGGCTCAGAGAATaGCTGAGGACACAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSPRLRE*LRTQFV
Trigger: GACAAACTGTGTCCTCAGCCATTCTCTGAGCCTTGG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 72 bp TGTTCACTCATTAGGCTGGAGCGGAATTTTCAATCCTaGTCAACTAGTGAGGAGAATGAAAAACATGCCAGG +
Preference number: 4 (lower is better)
Translates to: CSLIRLERNFQS*STSEENEKHAR
Trigger: CCTGGCATGTTTTTCATTCTCCTCACTAGTTGACAAGGATTGAAAATTCCGCTCCAGCCTAATGAGTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TCCTATTTCACCCACATGCTAAATAACTATAAATTGCTTGCTTACCACCCTCCAGTTTGGAGTAGAGGATaGGCTTTTTGTCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SYFTHMLNNYKLLAYHPPVWSRG*AFCLGA
Trigger: AGCCCCAAGACAAAAAGCTCATCCTCTACTCCAAAC...TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAGCATGTGGGTGAAATAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGTAGGTGCTGATTTGTaGCAGTTTTTCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGVGADL*QFFLGG
Trigger: TCCTCCAAGGAAAAACTGTCACAAATCAGCACCTAC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTTGGCCACAGGCTCTTaGGTGGCTCTCTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYLATGS*VALWIF
Trigger: AAAGATCCAGAGAGCCACTCAAGAGCCTGTGGCCAA...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCCTGTGGGGGTTGGATTaGAGCCACAATCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSLWGLD*SHNLRK
Trigger: CTTTCTCAGATTGTGGCTTCAATCCAACCCCCACAG...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCGCTTGGTCCAGTTGGTaGAATGCCTCTGCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCAWSSW*NASAKG
Trigger: ACCTTTTGCAGAGGCATTTCACCAACTGGACCAAGC...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAATGAAAATGGGTCTATaGCCCAAGGATGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGMKMGL*PKDGIS
Trigger: AGAGATCCCATCCTTGGGTCATAGACCCATTTTCAT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTATCTTAGAGCTCCACTaGCAGCTATTTCATTCAGGG +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGILELH*QLFHSG
Trigger: CCCTGAATGAAATAGCTGTCAGTGGAGCTCTAAGAT...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGAGTACTAAAAACATCTaGTATGAAGAGGTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVSTKNI*YEEVLG
Trigger: ACCAAGCACCTCTTCATATCAGATGTTTTTAGTACT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATTCCACAGGTTACAGTaGCTCTTTTTCTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGFHRLQ*LFFSSC
Trigger: GCAGGATGAGAAAAAGAGTCACTGTAACCTGTGGAA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCATGATGTTCTCAAGCTaGGGTTTGGGCAATAGCCAC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSMMFSS*GLGNSH
Trigger: GTGGCTATTGCCCAAACCTCAGCTTGAGAACATCAT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTACATTCAAGTTATCATaGGTGCGGACACACACATAC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSTFKLS*VRTHTY
Trigger: GTATGTGTGTGTCCGCACTCATGATAACTTGAATGT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAATTTACACAGTAACATaGTGCCACGGAGTACACAGC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGIYTVT*CHGVHS
Trigger: GCTGTGTACTCCGTGGCATCATGTTACTGTGTAAAT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACACATTCTCTTTACCTaGGGTACAATTTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGHILFT*GTICLP
Trigger: TGGGAGGCAAATTGTACCTCAGGTAAAGAGAATGTG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATTTGATCAACAATATTTaGGCACTTACTATTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLINNI*ALTIAW
Trigger: CCAGGCAATAGTAAGTGCTCAAATATTGTTGATCAA...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATTTCCAAATTTCAAGGTaGTTTGGGTCTTTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHFQISR*FGSFQD
Trigger: ATCTTGGAAAGACCCAAAGCACCTTGAAATTTGGAA...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCTGGGGGAAGCTGGTaGAAACTTTTAGGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRSGGSW*KLLGLK
Trigger: CTTTAAACCTAAAAGTTTGCACCAGCTTCCCCCAGA...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCTCACCACATATACTTTaGCCATCTGCCACTATCATA +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKISPHIL*PSATII
Trigger: TATGATAGTGGCAGATGGGCAAAGTATATGTGGTGA...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp TCCTATTTCACCCACATGCTAAATAACTATAAATTGCTTGCTTACCACCCTCCAAACTCGGTAAGGTTTTaGTTGCTCTTCTGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SYFTHMLNNYKLLAYHPPNSVRF*LLFCGD
Trigger: GTCCCCACAGAAGAGCAAGCAAAACCTTACCGAGTT...TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAGCATGTGGGTGAAATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAACTCGGTAAGGTTTTaGTTGCTCTTCTGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSNSVRF*LLFCGD
Trigger: GTCCCCACAGAAGAGCAAGCAAAACCTTACCGAGTT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCTGCAAAAGGTTACCTaGATGGTAAGGAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSLQKVT*MVRRRS
Trigger: ACTTCTTCTCCTTACCATGCAGGTAACCTTTTGCAG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACATCTCCTCATGCCCTaGCAGCTATTTATAAGCTCT +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGHLLMP*QLFISS
Trigger: AGAGCTTATAAATAGCTGGCAGGGCATGAGGAGATG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTGGCCCCTAGAGAATTaGACATGCAAGAAAATCATC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHWPLEN*TCKKII
Trigger: GATGATTTTCTTGCATGTGCAATTCTCTAGGGGCCA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGAGGTATATCTCAATATaGAAGACATTGCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVRYISI*KTLQDG
Trigger: CCCATCTTGCAATGTCTTGCATATTGAGATATACCT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTCTTGCTTCTGTATTTaGCTCATGCCAAAATGCCCT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSSCFCI*LMPKCP
Trigger: AGGGCATTTTGGCATGAGGCAAATACAGAAGCAAGA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAAGGCCTCGAAGTTATTaGCAGATCAACTCAAAATTA +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNERPRSY*QINSKL
Trigger: TAATTTTGAGTTGATCTGGCAATAACTTCGAGGCCT...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCCACTCTCCTCGCCACTaGAAAACTCTGGGTAACAGA +
Preference number: 4 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSHSPRH*KTLGNR
Trigger: TCTGTTACCCAGAGTTTTCCAGTGGCGAGGAGAGTG...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAAAGAATCTGGTGATGTaGAGTCAGATGACACCATGC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGKNLVM*SQMTPC
Trigger: GCATGGTGTCATCTGACTCCACATCACCAGATTCTT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCTGGGATAAACTACTaGCTGTCTCAGAACGTGATT +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRSGINY*LSQNVI
Trigger: AATCACGTTCTGAGACAGCCAGTAGTTTATCCCAGA...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATTGCTTGCTCTTCTGTaGGGACAAGGTTTATGGTTA +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRLLALL*GQGLWL
Trigger: TAACCATAAACCTTGTCCCCACAGAAGAGCAAGCAA...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAATATGGCTTGCACAATaGCTGTTCCAGGTTCACAAC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGIWLAQ*LFQVHN
Trigger: GTTGTGAACCTGGAACAGCCATTGTGCAAGCCATAT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGGTATCGAATTGCACTaGATTTTTGGAAATGGGCAC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHGIELH*IFGNGH
Trigger: GTGCCCATTTCCAAAAATCCAGTGCAATTCGATACC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAAGGTATCTTTTGTCGTaGACTGGTGCTAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGRYLLS*TGARSP
Trigger: TGGACTTCTAGCACCAGTCCACGACAAAAGATACCT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCCCACAGGCTCTTGAGTaGCTCTCTGGATCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSPQALE*LSGSLL
Trigger: CAGCAAAGATCCAGAGAGCCACTCAAGAGCCTGTGG...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAAAGATTGAGGTGTTTCTaGAGGAGACTGTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQRLRCF*RRLWGL
Trigger: CAACCCCCACAGTCTCCTCCAGAAACACCTCAATCT...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTAGATTGAGGTGTTTCTaGAGGAGACTGTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPRLRCF*RRLWGL
Trigger: CAACCCCCACAGTCTCCTCCAGAAACACCTCAATCT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCAGCATCTGGAGGAATaGCATAAAGCTCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSQHLEE*HKALPH
Trigger: GTGTGGAAGAGCTTTATGCCATTCCTCCAGATGCTG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCGCTGGTGGCTCACTTTaGGGGCTAGTCACTAATTTG +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCAGGSL*GLVTNL
Trigger: CAAATTAGTGACTAGCCCCCAAAGTGAGCCACCAGC...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACTTTCCATGGATTTTTaGAGGTCCTTGGAGATTGGC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGLSMDF*RSLEIG
Trigger: GCCAATCTCCAAGGACCTCCAAAAATCCATGGAAAG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATTCAGAACAGGGCTTTaGGTTTTTCCCATCCGTTTC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGFRTGL*VFPIRF
Trigger: GAAACGGATGGGAAAAACCCAAAGCCCTGTTCTGAA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTCTATGACCCAAGGATaGGATCTCTCCTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSSMTQG*DLSFSF
Trigger: GAAAGAAAAGGAGAGATCCCATCCTTGGGTCATAGA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTAATAACTTGGTTTTGTaGGCAGCCATCCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSNNLVL*AAILFT
Trigger: AGTGAACAGGATGGCTGCCCACAAAACCAAGTTATT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACAATAACTTGGTTTTGTaGGCAGCCATCCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHNNLVL*AAILFT
Trigger: AGTGAACAGGATGGCTGCCCACAAAACCAAGTTATT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTAGCAAGAGCAGCACTTaGATTTGTCTCGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPSKSST*ICLGTA
Trigger: TGCTGTGCCGAGACAAATCCAAGTGCTGCTCTTGCT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCGTTTACTGGTTTAATTaGCTCCAACTCTGGGCATTA +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKIVYWFN*LQLWAL
Trigger: TAATGCCCAGAGTTGGAGCCAATTAAACCAGTAAAC...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp TCCTATTTCACCCACATGCTAAATAACTATAAATTGCTTGCTTACCACCCTCCATGGGTCTTTCCAAGATaGATGTCCTTTCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SYFTHMLNNYKLLAYHPPWVFPR*MSFLPC
Trigger: GCAAGGAAGAAAGGACATTCATCTTGGAAAGACCCA...TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAGCATGTGGGTGAAATAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACGGTGGTTGTTACTGTaGTTGGCATTAGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGRWLLL*LALVFT
Trigger: TGTGAAAACTAATGCCAATCACAGTAACAACCACCG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATAATTGCCCGTGTTCCTaGTGCGGTGGTTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYNCPCS*CGGCYC
Trigger: ACAGTAACAACCACCGCATCAGGAACACGGGCAATT...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAATCATTTCCTCTTATCTaGGGGGCAGTATCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQSFPLI*GAVSKP
Trigger: AGGCTTGGATACTGCCCCTCAGATAAGAGGAAATGA...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCCTCCTCCATGTTACTaGAAAGTACATCCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSPPPCY*KVHPLH
Trigger: GTGAAGAGGATGTACTTTTCAGTAACATGGAGGAGG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAAGCCTCACCACTAGGCTaGGATGTAAAGAGAGATTTG +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQASPLG*DVKRDL
Trigger: CAAATCTCTCTTTACATCTCAGCCTAGTGGTGAGGC...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGACTTTTTAGGAATCTGTaGTGGAGAAGAATGACTCCT +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRLFRNL*WRRMTP
Trigger: AGGAGTCATTCTTCTCCATCACAGATTCCTAAAAAG...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTGGATCTTTTGCATATaGAGCAGTATAGTAAACCGC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHWIFCI*SSIVNR
Trigger: GCGGTTTACTATACTGCTTCATATGCAAAAGATCCA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTTAAACTCTGTTTCCTaGTGGCCCCTAGAGAATTGC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSLNSVS*WPLENC
Trigger: GCAATTCTCTAGGGGCCATCAGGAAACAGAGTTTAA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGTCAGGTTACTTCCCTaGACCAAAGTATTCATAACT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSVRLLP*TKVFIT
Trigger: AGTTATGAATACTTTGGTTCAGGGAAGTAACCTGAC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCCATCTCTATTTCTGTaGCTAGCCTGTACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHPSLFL*LACTFS
Trigger: TGAAAAAGTACAGGCTAGTCACAGAAATAGAGATGG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAATGTCCGACCTCTTTTaGTTCCCTGAAACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGMSDLF*FPETFL
Trigger: CAAGAAAGTTTCAGGGAATCAAAAGAGGTCGGACAT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACTTAACAACAACTTGTaGTCTGCCAACTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGLNNNL*SANCSS
Trigger: AGAACTGCAGTTGGCAGATCACAAGTTGTTGTTAAG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTACGAGGCCGAGATTTaGATTCACAGTATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSYEAEI*IHSIFV
Trigger: AACAAAGATACTGTGAATTCAAATCTCGGCCTCGTA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTCATCCCAACTCTCGTaGTCCTCCTCCATGTTACTG +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYSSQLS*SSSMLL
Trigger: CAGTAACATGGAGGAGGAGCACGAGAGTTGGGATGA...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAGGAGACAATGTGTTTaGTCTGAAGTTGGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSRRQCV*SEVGKA
Trigger: CGCTTTGCCAACTTCAGAGCAAACACATTGTCTCCT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCAGGAGACAATGTGTTTaGTCTGAAGTTGGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLRRQCV*SEVGKA
Trigger: CGCTTTGCCAACTTCAGAGCAAACACATTGTCTCCT...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAACACCATGCTCTGAATaGTTCCTTGTCCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGTPCSE*FLVHKR
Trigger: TCTCTTATGGACAAGGAAGCATTCAGAGCATGGTGT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTTTTATGGTTACTGCTTaGCCAGCAACATCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGFMVTA*PATSVE
Trigger: CTCTACAGATGTTGCTGGGCAAGCAGTAACCATAAA...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAATCTGAGACTCCTGAGTaGCTTCTATTTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQSETPE*LLFWPQ
Trigger: CTGTGGCCAAAATAGAAGGCACTCAGGAGTCTCAGA...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCTTGGTGAAATGCCTCTaGAAAAGGTTACCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLLVKCL*KRLPAW
Trigger: CCATGCAGGTAACCTTTTGCAGAGGCATTTCACCAA...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCGTCCAGTTGGTGAAATaGCTCTGCAAAAGGTTACCT +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLVQLVK*LCKRLP
Trigger: AGGTAACCTTTTGCAGAGGCATTTCACCAACTGGAC...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGATTTATCAGCTAAATaGCTTGACATGGAATGTATG +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHDLSAK*LDMECM
Trigger: CATACATTCCATGTCAAGGCATTTAGCTGATAAATC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAGATTTATCAGCTAAATaGCTTGACATGGAATGTATG +
Preference number: 4 (lower is better)
Translates to: ESDRMASLRTTNGILRNEDLSAK*LDMECM
Trigger: CATACATTCCATGTCAAGGCATTTAGCTGATAAATC...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCTAATTTTAAACAGTTaGAGGGAGGGGGTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSLILNS*REGVFN
Trigger: GTTAAACACCCCCTCCCTGCAACTGTTTAAAATTAG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTCAAGTTATCATGAGTaGGGACACACACATACTATC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHSSYHE*GHTHTI
Trigger: GATAGTATGTGTGTGTCCGCACTCATGATAACTTGA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCCTGCATTCACCAGAATaGAGTAGGCTACTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLLHSPE*SRLLKP
Trigger: TGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAG...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGATTATTATTGTTAAGTaGTTTCTGACTCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVIIIVK*FLTQGS
Trigger: GCTGCCTTGAGTCAGAAACCACTTAACAATAATAAT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCCATTACAAATCTTCTaGGATAAACTACTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSPLQIF*DKLLAV
Trigger: GACAGCCAGTAGTTTATCCCAGAAGATTTGTAATGG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCTTTTATTGAGCTTTTaGAAGCCTGTGATGAATCTT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLLLSF*KPVMNL
Trigger: AAGATTCATCACAGGCTTCCAAAAGCTCAATAAAAG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCATCCACGACAGTATATaGCTTGCACAATGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSIHDSI*LAQWLF
Trigger: GAACAGCCATTGTGCAAGCCATATACTGTCGTGGAT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCCATGAAGACAATGGCTaGTTTCTCACTGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSHEDNG*FLTGLS
Trigger: GGAGAGTCCAGTGAGAAACCAGCCATTGTCTTCATG...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTTATGATCATCTTCTTTaGCAGTGGGGGTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPYDHLL*QWGWCR
Trigger: CCTACACCACCCCCACTGCCAAAGAAGATGATCATA...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATTCACACTTTTTATACTaGGTAGCTGTTATGATCTCT +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHSHFLY*VAVMIS
Trigger: AGAGATCATAACAGCTACCCAGTATAAAAAGTGTGA...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATCTATGACCCAAGGATaGGATCTCTCCTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGSMTQG*DLSFSF
Trigger: GAAAGAAAAGGAGAGATCCCATCCTTGGGTCATAGA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTGAGCCACTTAAACACTaGGAGGCAGTCTCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPEPLKH*EAVSLE
Trigger: TTCTAGAGAGACTGCCTCCCAGTGTTTAAGTGGCTC...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCTATCTCACATTCTTTaGCCATCACCCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSLSHIL*PSPREK
Trigger: TTTTTCTCTGGGTGATGGCCAAAGAATGTGAGATAG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTATAAAGCTAATAACTTaGTTTTGTGGGCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSIKLIT*FCGQPS
Trigger: GGATGGCTGCCCACAAAACCAAGTTATTAGCTTTAT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAAGAGACTTTCTGGAGTaGGAAACATGTAATGGGATG +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGRDFLE*ETCNGM
Trigger: CATCCCATTACATGTTTCCCACTCCAGAAAGTCTCT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAATGAACCCTATGTCTaGTTCAACATTCAAGTTATC +
Preference number: 4 (lower is better)
Translates to: PQPIPHPVHLLRANLETHNEPYV*FNIQVI
Trigger: GATAACTTGAATGTTGAACCAGACATAGGGTTCATT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTTCAAATACAGAGTGTaGGCAGGGCCAGAGAGAATT +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSFKYRV*AGPERI
Trigger: AATTCTCTCTGGCCCTGCCCACACTCTGTATTTGAA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTCCCTTACTAAGGATCTaGGGCAAACAAACCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPPLLRI*GKQTLS
Trigger: AGAGAGGGTTTGTTTGCCCCAGATCCTTAGTAAGGG...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCGTAGGTGCTGATTTGTaGCAGTTTTTCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSVGADL*QFFLGG
Trigger: TCCTCCAAGGAAAAACTGTCACAAATCAGCACCTAC...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGAAGAAGCTTTTAAATaGTATCCAGCGCTTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSEEAFK*YPALRF
Trigger: AAACCTAAGCGCTGGATATCATTTAAAAGCTTCTTC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGAGAAGAAGCTTTTAAATaGTATCCAGCGCTTAGGTTT +
Preference number: 4 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQREEAFK*YPALRF
Trigger: AAACCTAAGCGCTGGATATCATTTAAAAGCTTCTTC...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCTTTTTAGGAATCTGTaGTGGAGAAGAATGACTCCT +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGLFRNL*WRRMTP
Trigger: AGGAGTCATTCTTCTCCATCACAGATTCCTAAAAAG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACACATACTCACAGTTTTaGATAAAACAAGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHTYSQF*IKQAQV
Trigger: CACCTGTGCTTGTTTTATTCAAAACTGTGAGTATGT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCGAATGCCTAGAGAACTaGTTTGGGTATGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLECLEN*FGYAIC
Trigger: ACAGATTGCATACCCAAATCAGTTCTCTAGGCATTC...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTTGATAGGTGGAAAATaGGATGCCAACAATATGATC +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHLIGGK*DANNMI
Trigger: GATCATATTGTTGGCATCTCATTTTCCACCTATCAA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTATACTTTGCCCATCTaGCACTATCATAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSYTLPI*HYHSGL
Trigger: AAGCCCACTATGATAGTGGCAGATGGGCAAAGTATA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATCGACAGTATATGGCTTaGACAATGGCTGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYRQYMA*TMAVPG
Trigger: ACCTGGAACAGCCATTGTGCAAGCCATATACTGTCG...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCTAATTTTAAACAGTTaGAGGGAGGGGGTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGLILNS*REGVFN
Trigger: GTTAAACACCCCCTCCCTGCAACTGTTTAAAATTAG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATTGCCACTCAAAAGCTaGAAGCAGTTTTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGLPLKS*KQFSDS
Trigger: AGAATCAGAAAACTGCTTGCAGCTTTTGAGTGGCAA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATGTTTTCACATTGCCATaGGTGATGGGTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYVFTLP*VMGAFS
Trigger: TGAGAAGGCACCCATCACCCATGGCAATGTGAAAAC...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCATTATTATTGTTAAGTaGTTTCTGACTCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: AKVPLHSPECSRLLKPKIIIIVK*FLTQGS
Trigger: GCTGCCTTGAGTCAGAAACCACTTAACAATAATAAT...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCAAGAATCTGGTGATGTaGAGTCAGATGACACCATGC +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCKNLVM*SQMTPC
Trigger: GCATGGTGTCATCTGACTCCACATCACCAGATTCTT...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTTGCTTGCTCTTCTGTaGGGACAAGGTTTATGGTTA +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSLLALL*GQGLWL
Trigger: TAACCATAAACCTTGTCCCCACAGAAGAGCAAGCAA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCATATGGCTTGCACAATaGCTGTTCCAGGTTCACAAC +
Preference number: 4 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSIWLAQ*LFQVHN
Trigger: GTTGTGAACCTGGAACAGCCATTGTGCAAGCCATAT...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTAAAGACTACTTTCCATaGATTTTTGGAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGKDYFP*IFGGPW
Trigger: CCAAGGACCTCCAAAAATCCATGGAAAGTAGTCTTT...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGTAATGGGCCACAAGTaGCTGATAAATCCAAACTTC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSVMGHK*LINPNF
Trigger: GAAGTTTGGATTTATCAGCCACTTGTGGCCCATTAC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACTTATTCTTCATGAATTaGCTTCTAGGCAACCCAGTA +
Preference number: 4 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHLFFMN*LLGNPV
Trigger: TACTGGGTTGCCTAGAAGCCAATTCATGAAGAATAA...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAGGCAAAACTCCCAGTaGAGCTTTTGTTACACTTCA +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSRQNSQ*SFCYTS
Trigger: TGAAGTGTAACAAAAGCTCCACTGGGAGTTTTGCCT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 72 bp GTACAGAGGTTTATCTGGGATCTCAAGGAAGTCAGTTaGTGTCCAAAAAGCCTATTTCCTTTTAGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: VQRFIWDLKEVS*CPKSLFPFRGL
Trigger: CAAACCTCTAAAAGGAAATAGGCTTTTTGGACACAAACTGACTTCCTTGAGATCCCAGATAAACCTCTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
3UTR CAA 72 bp AAATTCAGCCAGGAGATATTTGGAAAGCTGGAGAAATaGCCACTCAAAAGCTGCAAGCAGTTTTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: KFSQEIFGKLEK*PLKSCKQFSDS
Trigger: AGAATCAGAAAACTGCTTGCAGCTTTTGAGTGGCAATTTCTCCAGCTTTCCAAATATCTCCTGGCTGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR TCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACGGTGGTTGTTACTGTaGTTGGCATTAGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQRWLLL*LALVFT
Trigger: TGTGAAAACTAATGCCAATCACAGTAACAACCACCG...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCTTGTTAAGTGGTTTCTaGCTCAAGGCAGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCLLSGF*LKAALF
Trigger: AAACAGAGCTGCCTTGAGTCAGAAACCACTTAACAA...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCTTTTTAGGAATCTGTaGTGGAGAAGAATGACTCCT +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSLFRNL*WRRMTP
Trigger: AGGAGTCATTCTTCTCCATCACAGATTCCTAAAAAG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGTCATTTCTAGATGGTaGCCTAGTGGGTCAATTTTA +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSVISRW*PSGSIL
Trigger: TAAAATTGACCCACTAGGTCACCATCTAGAAATGAC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCTATACTTTGCCCATCTaGCACTATCATAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCYTLPI*HYHSGL
Trigger: AAGCCCACTATGATAGTGGCAGATGGGCAAAGTATA...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCTTTATGGTTACTGCTTaGCCAGCAACATCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSFMVTA*PATSVE
Trigger: CTCTACAGATGTTGCTGGGCAAGCAGTAACCATAAA...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAATCTTGAAACTCATTaGCATATTCCTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSNLETH*HIPGFQ
Trigger: CTGGAAGCCAGGAATATGGCAATGAGTTTCAAGATT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTGAGGAACTTTGTATCTaGCAGGGCTTTCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPEELCI*QGFLHL
Trigger: AAGATGAAGAAAGCCCTGGCAGATACAAAGTTCCTC...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TCCTATTTCACCCACATGCTAAATAACTATAAATTGCTTGCTTACCACCCTCCAATGATGGCCACAGAGTaGTACTTACAAACAGAAATG +
Preference number: 4 (lower is better)
Translates to: SYFTHMLNNYKLLAYHPPMMATE*YLQTEM
Trigger: CATTTCTGTTTGTAAGTAGCACTCTGTGGCCATCAT...TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAGCATGTGGGTGAAATAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTAAAGAACAGGAACGATaGGGGTGCAGAGAATTTCAA +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPKEQER*GCREFQ
Trigger: TTGAAATTCTCTGCACCCGCATCGTTCCTGTTCTTT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCATCCACGACAGTATATaGCTTGCACAATGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSIHDSI*LAQWLF
Trigger: GAACAGCCATTGTGCAAGCCATATACTGTCGTGGAT...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAAGGTATCGAATTGCACTaGATTTTTGGAAATGGGCAC +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQGIELH*IFGNGH
Trigger: GTGCCCATTTCCAAAAATCCAGTGCAATTCGATACC...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCGAAGTCCATACTTCTTaGTATCGAATTGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLEVHTS*YRIALD
Trigger: ATCCAGTGCAATTCGATACCAAGAAGTATGGACTTC...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGTCAAGATAAAAAGCTaGAATAAACCCAGAGACTTT +
Preference number: 4 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSVKIKS*NKPRDF
Trigger: AAAGTCTCTGGGTTTATTCCAGCTTTTTATCTTGAC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCAATTGGCTCCAACTCTaGGCATTATGTTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCNWLQL*ALCCCF
Trigger: GAAGCAACAACATAATGCCCAGAGTTGGAGCCAATT...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
3UTR CAA 72 bp ATATTTAATTTAATCACTCAGTCAGTACTGAATCAGTaGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: IFNLITQSVLNQ*LWSPALVRPGL
Trigger: CAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAGTACTGACTGAGTGATTAAATTAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCATGTCCTTTCTTCCTTaGCTCTCATTCCTTAATTTC +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSMSFLP*LSFLNF
Trigger: GAAATTAAGGAATGAGAGGCAAGGAAGAAAGGACAT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR GCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAAGGTTTATGGTTACTaGTTGCCCAGCAACATCTGT +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSKVYGY*LPSNIC
Trigger: ACAGATGTTGCTGGGCAAGCAGTAACCATAAACCTT...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATCTGCAAAAGGTTACCTaGATGGTAAGGAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYLQKVT*MVRRRS
Trigger: ACTTCTTCTCCTTACCATGCAGGTAACCTTTTGCAG...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTAATCTTGAAACTCATTaGCATATTCCTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPNLETH*HIPGFQ
Trigger: CTGGAAGCCAGGAATATGGCAATGAGTTTCAAGATT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR GCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAAATGCTAAAGTTCCTCTaGATTCACCAGAATGCAGTA +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQMLKFL*IHQNAV
Trigger: TACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTTCATCTCTGTATCTGTaGATCTTTTATACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGSSLYL*IFYTSQ
Trigger: CTGAGAAGTATAAAAGATGCACAGATACAGAGATGA...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTTCTCACAGTGTTCTTaGATGCTAAGCTCACCACAT +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYFSQCS*MLSSPH
Trigger: ATGTGGTGAGCTTAGCATCCAAGAACACTGTGAGAA...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCCTGGATTTTTGGAAATaGGCACTTATTTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSLDFWK*ALICPG
Trigger: ACCAGGACAAATAAGTGCCCATTTCCAAAAATCCAG...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTACTCCGAGCATAAGTTaGCTCGTCATGAATGATAAT +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPTPSIS*LVMNDN
Trigger: ATTATCATTCATGACGAGCCAACTTATGCTCGGAGT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCGATAGCAATGTTTACTaGTTTAATTGGCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: LAELNIILLGLSLNTQLLDSNVY*FNWLQL
Trigger: GAGTTGGAGCCAATTAAACCAGTAAACATTGCTATC...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
3UTR CAA 72 bp AAAACAGTACTAAAAACATCTGATATGAAGAGGTGCTaGGTTTACCAGTGCTGTAAGATAATGGTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: KTVLKTSDMKRC*VYQCCKIMVVE
Trigger: CTCCACTACCATTATCTTACAGCACTGGTAAACCAAGCACCTCTTCATATCAGATGTTTTTAGTACTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR TCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGTTATAAAGATAGATaGTGGCCACAGAGTGCTACT +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSSYKDR*WPQSAT
Trigger: AGTAGCACTCTGTGGCCATCATCTATCTTTATAACT...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCATGTCCTTTCTTCCTTaGCTCTCATTCCTTAATTTC +
Preference number: 4 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSMSFLP*LSFLNF
Trigger: GAAATTAAGGAATGAGAGGCAAGGAAGAAAGGACAT...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAATTCCAAATTTCAAGGTaGTTTGGGTCTTTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQFQISR*FGSFQD
Trigger: ATCTTGGAAAGACCCAAAGCACCTTGAAATTTGGAA...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCCCATTACAAATCTTCTaGGATAAACTACTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSPLQIF*DKLLAV
Trigger: GACAGCCAGTAGTTTATCCCAGAAGATTTGTAATGG...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTAGGGACTTTCATAATTaGGCTCAATTTCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPRDFHN*AQFPSC
Trigger: ACATGAAGGAAATTGAGCCCAATTATGAAAGTCCCT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CCA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCTTTTATTGAGCTTTTaGAAGCCTGTGATGAATCTT +
Preference number: 4 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSLLLSF*KPVMNL
Trigger: AAGATTCATCACAGGCTTCCAAAAGCTCAATAAAAG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CCA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATACTCCGAGCATAAGTTaGCTCGTCATGAATGATAAT +
Preference number: 4 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYTPSIS*LVMNDN
Trigger: ATTATCATTCATGACGAGCCAACTTATGCTCGGAGT...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCTTTTTCCACAACACTTaGAAGGAGGACAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSFFHNT*KEDRKR
Trigger: TCTCTTTCTGTCCTCCTTCCAAGTGTTGTGGAAAAA...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR TCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCTTCAGACAAATTAGGTaGCTTAACAGGGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSFRQIR*LNRDGF
Trigger: AAAACCATCCCTGTTAAGTCACCTAATTTGTCTGAA...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCTTCTTGGTATCGAATTaGACTGGATTTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSFLVSN*TGFLEM
Trigger: CATTTCCAAAAATCCAGTGCAATTCGATACCAAGAA...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR GCA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAATATAAGGAGGATACATaGTTTAGAATGAGAGATCGA +
Preference number: 4 (lower is better)
Translates to: ICLAELNIILLGLSLNTQYKEDT*FRMRDR
Trigger: TCGATCTCTCATTCTAAAGCATGTATCCTCCTTATA...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGGGACTTTCATAATTaGGCTCAATTTCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSRDFHN*AQFPSC
Trigger: ACATGAAGGAAATTGAGCCCAATTATGAAAGTCCCT...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CCA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCCTTTTATTGAGCTTTTaGAAGCCTGTGATGAATCTT +
Preference number: 4 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCLLLSF*KPVMNL
Trigger: AAGATTCATCACAGGCTTCCAAAAGCTCAATAAAAG...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS TCA 90 bp GGGGGATGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGACCCACTTaGGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GGCLPVRLLGGQGPT*GGSLPVLRSPAACW
Trigger: CCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCGAGCAGCCTAACTGGGAGGCATCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 90 bp GCAGCTGGCCAGCTGCTGCAGACCCCGGGAGTAGGGGGAGCGGAATaGGATGCGAGGCAGGTCTGCTCGTGTGTATTCCCTCTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: AAGQLLQTPGVGGAE*DARQVCSCVFPLLQ
Trigger: CTGAAGGAGAGGGAATACACACGAGCAGACCTGCCTCGCATCCCATTCCGCTCCCCCTACTCCCGGGGTCTGCAGCAGCTGGCCAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS TCA 90 bp GGGGGCCCCAGAGCAGACACTGGAGGATGCCTTTGGCGTCTGAAATaGGGATCCGCTCAGAAGGGTTGGGATTCAGGAGGCAGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GGPRADTGGCLWRLK*GSAQKGWDSGGSWP
Trigger: TGGCCAGCTGCCTCCTGAATCCCAACCCTTCTGAGCGGATCCTCATTTCAGACGCCAAAGGCATCCTCCAGTGTCTGCTCTGGGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 90 bp GATAAAGTGCTTGTCTCTGCGGCTTCTGGATGCCTCGGCCCTGTCTaGAAGAGGGCCCACGCCGGCTGGAGAGGGATTCCATGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: DKVLVSAASGCLGPV*KRAHAGWRGIPCCW
Trigger: CCAACAGCATGGAATCCCTCTCCAGCCGGCGTGGGCCCTCTTGCAGACAGGGCCGAGGCATCCAGAAGCCGCAGAGACAAGCACTTTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 90 bp GATTCTCAAGTCCTCGATAAAGTGCTTGTCTCTGCGGCTTCTGGATaGCTCGGCCCTGTCTGCAAGAGGGCCCACGCCGGCTGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: DSQVLDKVLVSAASG*LGPVCKRAHAGWRG
Trigger: CCCTCTCCAGCCGGCGTGGGCCCTCTTGCAGACAGGGCCGAGGCATCCAGAAGCCGCAGAGACAAGCACTTTATCGAGGACTTGAGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS-3UTR CAA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTCGTCCACAGCTCCCTaGGGCTGTCGTGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRSSTAP*GCRGCL
Trigger: CAAGCAGCCACGACAGCCCAAGGGAGCTGTGGACGA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGCCAGTGCTAATGCCTaGTGTTGGCCTGGCGATCCC +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSASANA*CWPGDP
Trigger: GGGATCGCCAGGCCAACACAAGGCATTAGCACTGGC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS TCA 90 bp TTCGCGGGGGCCCCAGAGCAGACACTGGAGGATGCCTTTGGCGTCTaGAATGAGGATCCGCTCAGAAGGGTTGGGATTCAGGAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: FAGAPEQTLEDAFGV*NEDPLRRVGIQEAA
Trigger: AGCTGCCTCCTGAATCCCAACCCTTCTGAGCGGATCCTCATTTCAGACGCCAAAGGCATCCTCCAGTGTCTGCTCTGGGGCCCCCGCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 90 bp AGCAGGGTGTTCCTCTGTACTAGGCTAGGGCAGGCGGTGAAAGTCTaGAAGAGATCTTCGCGGGGGCCCCAGAGCAGACACTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: SRVFLCTRLGQAVKV*KRSSRGPQSRHWRM
Trigger: CATCCTCCAGTGTCTGCTCTGGGGCCCCCGCGAAGATCTCTTCCAGACTTTCACCGCCTGCCCTAGCCTAGTACAGAGGAACACCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS-3UTR CAA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCACCCTGCTGAGGCATaGGTGACACCACCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRHPAEA*VTPPWV
Trigger: GACCCAAGGTGGTGTCACCAATGCCTCAGCAGGGTG...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTACTGGGGTCAGCCCTaGCCCAACACCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRYWGQP*PNTPGQ
Trigger: CTGTCCTGGGGTGTTGGGCAAGGGCTGACCCCAGTA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS GCA 90 bp CAGACCCCGGGAGTAGGGGGAGCGGAATGGGATGCGAGGCAGGTCTaGTCGTGTGTATTCCCTCTCCTTCAGCTCTGGGTTCTCATCAAA +
Preference number: 5 (lower is better)
Translates to: QTPGVGGAEWDARQV*SCVFPLLQLWVLIK
Trigger: TTTGATGAGAACCCAGAGCTGAAGGAGAGGGAATACACACGAGCAGACCTGCCTCGCATCCCATTCCGCTCCCCCTACTCCCGGGGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 90 bp GGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTaGGTGCTGGGAGAACCACTACTCTCCTCAAAGCTGTCAGACAGG +
Preference number: 5 (lower is better)
Translates to: GTHLRRQSARSQISS*VLGEPLLSSKLSDR
Trigger: CCTGTCTGACAGCTTTGAGGAGAGTAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS-3UTR CAA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGATCCGCTCAGAAGGGTaGGGATTCAGGAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRIRSEG*GFRRQL
Trigger: CAGCTGCCTCCTGAATCCCAACCCTTCTGAGCGGAT...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCCCAGCAAGTCCAGTTaGTCTCACCCCTCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSPSKSS*SHPSPR
Trigger: TCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS TCA 90 bp GGGGCTGTTAACAGGGCCCTCGAGGTGCTCACTGGCCATGGCTGCTaGCACATCCACGACAGTATATGGCTTGCACAATGGCTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GAVNRALEVLTGHGC*HIHDSIWLAQWLFQ
Trigger: CTGGAACAGCCATTGTGCAAGCCATATACTGTCGTGGATGTGTCAGCAGCCATGGCCAGTGAGCACCTCGAGGGCCCTGTTAACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS TCA 90 bp CTTGGCCTGAGAGAAGTTGCTCACTATAAGCCTAGTGGGATAAGATaGGGTGGGGCTGGGCTCTGCAGGCCCAAAGCCTTGGGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LGLREVAHYKPSGIR*GGAGLCRPKALGSP
Trigger: GGGACTGCCCAAGGCTTTGGGCCTGCAGAGCCCAGCCCCACCTCATCTTATCCCACTAGGCTTATAGTGAGCAACTTCTCTCAGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 90 bp GTGAAAGTCTGGAAGAGATCTTCGCGGGGGCCCCAGAGCAGACACTaGAGGATGCCTTTGGCGTCTGAAATGAGGATCCGCTCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: VKVWKRSSRGPQSRH*RMPLASEMRIRSEG
Trigger: CCCTTCTGAGCGGATCCTCATTTCAGACGCCAAAGGCATCCTCCAGTGTCTGCTCTGGGGCCCCCGCGAAGATCTCTTCCAGACTTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS-3UTR CAA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGTTGGCAAAGCGAGGTaGCCCTCTCATGCGAATCTC +
Preference number: 5 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRVGKAR*PSHANL
Trigger: GAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAAC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTGTGTTTGCTCTGAAGTaGGCAAAGCGAGGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: PLRPAELHTAARSWYALFVFALK*AKRGCP
Trigger: AGGGCAACCTCGCTTTGCCAACTTCAGAGCAAACAC...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGAGAAAGCACTGTGCTaGCTTTCTCTCTGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSEKALC*LSLWCC
Trigger: GCAGCACCAGAGAGAAAGCAAGCACAGTGCTTTCTC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCACTGGAGGATGCCTTaGGCGTCTGAAATGAGGATC +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSHWRMP*ASEMRI
Trigger: GATCCTCATTTCAGACGCCAAAGGCATCCTCCAGTG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCAGGAGGCAAGACTCTTaGTGGGCTAACCAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSRRQDS*WANQPS
Trigger: AGAAGGCTGGTTAGCCCACAAAGAGTCTTGCCTCCT...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS CCA 90 bp TTTGGCAGTGGGGGTGGTGTAGGTTGGGAAGCATTGGGTGCTTCTTaGTCTGTTTTCCCTCCAAAGGCGATGGCATCGTCCACAGCTCCC +
Preference number: 5 (lower is better)
Translates to: FGSGGGVGWEALGAS*SVFPPKAMASSTAP
Trigger: GGGAGCTGTGGACGATGCCATCGCCTTTGGAGGGAAAACAGACCAAGAAGCACCCAATGCTTCCCAACCTACACCACCCCCACTGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS-3UTR CAA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGAGCTGGAAATGCTGTTaGCTGCTGAGGGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRSWKCC*LLRGQV
Trigger: GACCTGTCCCCTCAGCAGCAAACAGCATTTCCAGCT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCCATCCGTTTCTCCTTaGGCGTCTTCTTCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSPSVSP*ASSSVS
Trigger: AGAGACTGAAGAAGACGCCAAAGGAGAAACGGATGG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTAAAGAAGGTTGTCAGTaGCTCTGTGGCAGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: PLRPAELHTAARSWYALFKEGCQ*LCGSCW
Trigger: CCAACAGCTGCCACAGAGCAACTGACAACCTTCTTT...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGAATAAAGGGTCCAGGTaGTGTAGGGAGGAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRNKGSR*CREEGR
Trigger: CCTGCCTTCCTCCCTACACAACCTGGACCCTTTATT...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS GCA 90 bp CAGCGCTTAGGTTTTGCATCAGCTGCCCGCCTGCTGCCTTCAGAGTaGAAAACTGATTCAGCTTCTGTTGACCTGGTAGGGCTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: QRLGFASAARLLPSE*KTDSASVDLVGLVG
Trigger: GCCAACCAGCCCTACCAGGTCAACAGAAGCTGAATCAGTTTTGCACTCTGAAGGCAGCAGGCGGGCAGCTGATGCAAAACCTAAGCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS-3UTR CAA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGACAGGAGGCCGGAAATaGCCCGTGTTCCTGATGCGG +
Preference number: 5 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTTGGRK*PVFLMR
Trigger: CCGCATCAGGAACACGGGCAATTTCCGGCCTCCTGT...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGCTCTGAATGCTTCCTaGTCCATAAGAGACCACAGA +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSALNAS*SIRDHR
Trigger: TCTGTGGTCTCTTATGGACAAGGAAGCATTCAGAGC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGGGCTGTCGTGGCTGCTaGGGAGGTATCATGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRGCRGC*GGIMAA
Trigger: AGCAGCCATGATACCTCCCAAGCAGCCACGACAGCC...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACACCCTGCTGAGGCATaGGTGACACCACCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIHPAEA*VTPPWV
Trigger: GACCCAAGGTGGTGTCACCAATGCCTCAGCAGGGTG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCAGGAGGCAAGACTCTTaGTGGGCTAACCAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: GQSGESGSGSRGETIRAVRRQDS*WANQPS
Trigger: AGAAGGCTGGTTAGCCCACAAAGAGTCTTGCCTCCT...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGCGGCTGTATAGCACCTaGTACCTTCTGGGCACTTAC +
Preference number: 5 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRRLYST*YLLGTY
Trigger: GTAAGTGCCCAGAAGGTACAAGGTGCTATACAGCCG...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGTGTCCACACATTAGCTaGTCTGCCTTTGTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRCPHIS*SAFVRP
Trigger: GGGCCTCACAAAGGCAGACAAGCTAATGTGTGGACA...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGATTGTCTGGTCAGGCTaGCTGTTGACCCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRIVWSG*LLTLPP
Trigger: AGGAGGAAGGGTCAACAGCAAGCCTGACCAGACAAT...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS TCA 90 bp TGCACCCACTGTCCTGCACCCACTGTCTGGCACTCCCTAGTGAGATaGACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: CTHCPAPTVWHSLVR*TRYLRWKCRNHPSS
Trigger: AGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGTGCAGGACAGTGGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 90 bp GGTTGGCTTGGTCCAGTTGGTGAAATGCCTCTGCAAAAGGTTACCTaGATGGTAAGGAGAAGAAGTAGAGCGTGGCGGGGGAAAGGGAGC +
Preference number: 5 (lower is better)
Translates to: GWLGPVGEMPLQKVT*MVRRRSRAWRGKGS
Trigger: GCTCCCTTTCCCCCGCCACGCTCTACTTCTTCTCCTTACCATGCAGGTAACCTTTTGCAGAGGCATTTCACCAACTGGACCAAGCCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS GCA 90 bp CATCTTCTTTGGCAGTGGGGGTGGTGTAGGTTGGGAAGCATTGGGTaGTTCTTGGTCTGTTTTCCCTCCAAAGGCGATGGCATCGTCCAC +
Preference number: 5 (lower is better)
Translates to: HLLWQWGWCRLGSIG*FLVCFPSKGDGIVH
Trigger: GTGGACGATGCCATCGCCTTTGGAGGGAAAACAGACCAAGAAGCACCCAATGCTTCCCAACCTACACCACCCCCACTGCCAAAGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAACAGGAGGCCGGAAATaGCCCGTGTTCCTGATGCGG +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLTGGRK*PVFLMR
Trigger: CCGCATCAGGAACACGGGCAATTTCCGGCCTCCTGT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCGTTTATGGTTACTGCTaGCCCAGCAACATCTGTAGA +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSVYGYC*PSNICR
Trigger: TCTACAGATGTTGCTGGGCAAGCAGTAACCATAAAC...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCACGACAGTATATGGCTaGCACAATGGCTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GQSGESGSGSRGETIRAVTTVYG*HNGCSR
Trigger: CCTGGAACAGCCATTGTGCAAGCCATATACTGTCGT...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCAGCTTTAGGGCCAGATaGAGGTGTTTCTGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GQSGESGSGSRGETIRAVSFRAR*RCFWRR
Trigger: TCTCCTCCAGAAACACCTCAATCTGGCCCTAAAGCT...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTACACACTGAGCTGGCCTaGAGCAGGGTCGCACCTGTA +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLHTELA*SRVAPV
Trigger: TACAGGTGCGACCCTGCTCAAGGCCAGCTCAGTGTG...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTCCCAACAACAGTTCTaGGATCCCGAGGAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSSQQQF*DPEEKN
Trigger: ATTTTTCTCCTCGGGATCCAAGAACTGTTGTTGGGA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGGGAGGTCCTTGGAGATaGGCTCTGTATTGGCTCTTA +
Preference number: 5 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRGGPWR*ALYWLL
Trigger: TAAGAGCCAATACAGAGCCAATCTCCAAGGACCTCC...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCGCCTCACAACATGGTTaGTCACTGGTTAGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: GQSGESGSGSRGETIRAVASQHG*SLVSLK
Trigger: CTTCAGGCTAACCAGTGACAAACCATGTTGTGAGGC...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGACTTCTCAGCAAACTaGATCATGAGCAGTGTTCGC +
Preference number: 5 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRDFSAN*IMSSVR
Trigger: GCGAACACTGCTCATGATCAAGTTTGCTGAGAAGTC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCCATTCAGTCTTGCTCTaGGCTACTTTAGCCACTGTT +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSHSVLL*ATLATV
Trigger: AACAGTGGCTAAAGTAGCCAAGAGCAAGACTGAATG...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTAGCATAAGTTCCAGTTaGGGCAGATACCTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: CILSGLQVFLDQTGGQAASISSS*GRYLRG
Trigger: GCCCCTCAGGTATCTGCCCAAACTGGAACTTATGCT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGACACACAGAGAGCTTTaGGGTCCACACCAACATGGG +
Preference number: 5 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQTHREL*GPHQHG
Trigger: CCCATGTTGGTGTGGACCCAAAAGCTCTCTGTGTGT...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACACCTGGAGTCTGGCTaGGGCAATCCTGAACTGGTC +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIHLESG*GNPELV
Trigger: GACCAGTTCAGGATTGCCCAAGCCAGACTCCAGGTG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTCATCCCAAAAGCTTCTaGGCTGAATGGGGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAHPKSF*AEWGPE
Trigger: TTCAGGGCCCCATTCAGCCAAGAAGCTTTTGGGATG...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS GCA 90 bp AGGTGCTCAAGACCAGAGCATAGCTGTAAGAGCAGCAGACACACCTaGCTCTCATACAAATCAGGGCTTTTCCCATGCTGGGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: RCSRPEHSCKSSRHT*LSYKSGLFPCWARE
Trigger: CTCTCTGGCCCAGCATGGGAAAAGCCCTGATTTGTATGAGAGGCAGGTGTGTCTGCTGCTCTTACAGCTATGCTCTGGTCTTGAGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 90 bp TCTGAGACTCCTGAGTGCCTTCTATTTTGGCCACAGGCTCTTGAGTaGCTCTCTGGATCTTTGCTGGGGAGCTGTGGCTGGAACTATAGC +
Preference number: 5 (lower is better)
Translates to: SETPECLLFWPQALE*LSGSLLGSCGWNYS
Trigger: GCTATAGTTCCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCCACTCAAGAGCCTGTGGCCAAAATAGAAGGCACTCAGGAGTCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTTCTTCCTTCTCAGTTaGTACAGCAATCTTGCCATC +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSFFLLS*YSNLAI
Trigger: GATGGCAAGATTGCTGTACAAACTGAGAAGGAAGAA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCAACTCGGTAAGGTTTaGCTTGCTCTTCTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQQLGKV*LALLWG
Trigger: TCCCCACAGAAGAGCAAGCAAAACCTTACCGAGTTG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTGATGAGCTTTTTGTCTaGGGGCTGTTAACAGGGCCC +
Preference number: 5 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGDELFV*GLLTGP
Trigger: GGGCCCTGTTAACAGCCCCAAGACAAAAAGCTCATC...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTGTGACAGTTTTTCCTaGGAGGAACATTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRCDSFS*EEHLVQ
Trigger: CTGGACCAAATGTTCCTCCAAGGAAAAACTGTCACA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGGTAGGTTGGGAAGCATaGGGTGCTTCTTGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQVGWEA*GASWSV
Trigger: AACAGACCAAGAAGCACCCAATGCTTCCCAACCTAC...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGGACTTCTCAGCAAACTaGATCATGAGCAGTGTTCGC +
Preference number: 5 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRDFSAN*IMSSVR
Trigger: GCGAACACTGCTCATGATCAAGTTTGCTGAGAAGTC...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGGATATGAAGAGGTGCTaGGTTTACCAGTGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRDMKRC*VYQCCK
Trigger: CTTACAGCACTGGTAAACCAAGCACCTCTTCATATC...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTGAGCAGCACTTGGATTaGTCTCGGCACAGCACTTTG +
Preference number: 5 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGEQHLD*SRHSTL
Trigger: CAAAGTGCTGTGCCGAGACAAATCCAAGTGCTGCTC...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGCAGCAAGAGCAGCACTaGGATTTGTCTCGGCACAGC +
Preference number: 5 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTQQEQH*DLSRHS
Trigger: GCTGTGCCGAGACAAATCCAAGTGCTGCTCTTGCTG...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCAAATTCCAGAGTGCTaGCTAGTGGAGAAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: GQSGESGSGSRGETIRAVQIPEC*LVEKSR
Trigger: TCTGCTCTTCTCCACTAGCAAGCACTCTGGAATTTG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATATACCTGAGGTACAATTaGCCTCCCATCCCCCAACCC +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIYLRYN*PPIPQP
Trigger: GGGTTGGGGGATGGGAGGCAAATTGTACCTCAGGTA...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGCCATCCTCCCCCGATGAGTCCTaGGTTATAAAAACAGAAAGT +
Preference number: 5 (lower is better)
Translates to: EVSSLISGLLPLPCLRPSSPDES*VIKTES
Trigger: ACTTTCTGTTTTTATAACCAAGGACTCATCGGGGGA...GGATGGCCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS TCA 90 bp GGAGGCCGGAAATTGCCCGTGTTCCTGATGCGGTGGTTGTTACTGTaGTTGGCATTAGTTTTCACATTGCCATGGGTGATGGGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: GGRKLPVFLMRWLLL*LALVFTLPWVMGAF
Trigger: GAAGGCACCCATCACCCATGGCAATGTGAAAACTAATGCCAATCACAGTAACAACCACCGCATCAGGAACACGGGCAATTTCCGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS TCA 90 bp GTGCTGCATTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGTaGGACTCCGTGAGCATAGGACCCTCTGAGCCAGTTGCGGGATAT +
Preference number: 5 (lower is better)
Translates to: VLHCSLISDCCASNQ*DSVSIGPSEPVAGY
Trigger: ATATCCCGCAACTGGCTCAGAGGGTCCTATGCTCACGGAGTCTCACTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAATGCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 90 bp GATTTTACCCACTACTTCCTCCCGATTCTCAAGTCCTCGATAAAGTaGTTGTCTCTGCGGCTTCTGGATGCCTCGGCCCTGTCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: DFTHYFLPILKSSIK*LSLRLLDASALSAR
Trigger: TCTTGCAGACAGGGCCGAGGCATCCAGAAGCCGCAGAGACAAGCACTTTATCGAGGACTTGAGAATCGGGAGGAAGTAGTGGGTAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 90 bp ATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTTGCTCATGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTC +
Preference number: 5 (lower is better)
Translates to: MNPVPQMEMQKSPVF*VAHAGSCRPELFLF
Trigger: GAATAGGAACAGCTCCGGTCTACAGCTCCCAGCATGAGCAACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 90 bp GCGGTGGCTGTAGAACAGTGGATTTTGGTGACCTGCAAATGCTGCTaGCTGATCGTTCCTCTGGAAGTTTTGTCTCAGAGGAGTACTCGG +
Preference number: 5 (lower is better)
Translates to: AVAVEQWILVTCKCC*LIVPLEVLSQRSTR
Trigger: CCGAGTACTCCTCTGAGACAAAACTTCCAGAGGAACGATCAGGCAGCAGCATTTGCAGGTCACCAAAATCCACTGTTCTACAGCCACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 90 bp CCGGACTGGCGTACTCTTAGGTGTGCTCTTAGCAACATCAGCATCTaGAGGAATGGCATAAAGCTCTTCCACACTGCAAGCTTTAGGGCC +
Preference number: 5 (lower is better)
Translates to: PDWRTLRCALSNISI*RNGIKLFHTASFRA
Trigger: GGCCCTAAAGCTTGCAGTGTGGAAGAGCTTTATGCCATTCCTCCAGATGCTGATGTTGCTAAGAGCACACCTAAGAGTACGCCAGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CCA 90 bp AGCCTCACCACTAGGCTGAGATGTAAAGAGAGATTTGGGCCGGACTaGCGTACTCTTAGGTGTGCTCTTAGCAACATCAGCATCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SLTTRLRCKERFGPD*RTLRCALSNISIWR
Trigger: CCTCCAGATGCTGATGTTGCTAAGAGCACACCTAAGAGTACGCCAGTCCGGCCCAAATCTCTCTTTACATCTCAGCCTAGTGGTGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CCA 90 bp CTGGTTAGCCTGAAGTCTGACCAGCTGTCCACTCCAAAACGGAGCTaGTCTTTCTGCCCAGCCATGAAAAGGTCTTCGCATTTAACAGCC +
Preference number: 5 (lower is better)
Translates to: LVSLKSDQLSTPKRS*SFCPAMKRSSHLTA
Trigger: GGCTGTTAAATGCGAAGACCTTTTCATGGCTGGGCAGAAAGACCAGCTCCGTTTTGGAGTGGACAGCTGGTCAGACTTCAGGCTAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS-3UTR CAA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCTCACCACATATACTTaGCCCATCTGCCACTATCAT +
Preference number: 5 (lower is better)
Translates to: GQSGESGSGSRGETIRAVLTTYT*PICHYH
Trigger: ATGATAGTGGCAGATGGGCAAAGTATATGTGGTGAG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTTTAACAGGGATGGTTTaGGAGGAAATGTTTGTAGCT +
Preference number: 5 (lower is better)
Translates to: PLRPAELHTAARSWYALFLTGMV*EEMFVA
Trigger: AGCTACAAACATTTCCTCCAAAACCATCCCTGTTAA...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATTGGCTCTCTGGATCTTaGCTGGGGAGCTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHWLSGS*LGSCGW
Trigger: CCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCCA...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAATGGCTCTCTGGATCTTaGCTGGGGAGCTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: ESDRMASLRTTNGILRNEWLSGS*LGSCGW
Trigger: CCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCCA...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGGCTGTCGTGGCTGCTaGGGAGGTATCATGGCTGCT +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVGCRGC*GGIMAA
Trigger: AGCAGCCATGATACCTCCCAAGCAGCCACGACAGCC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAAGCTGGAAATGCTGTTaGCTGCTGAGGGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLSWKCC*LLRGQV
Trigger: GACCTGTCCCCTCAGCAGCAAACAGCATTTCCAGCT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCTTCAGAACAGGGCTTaGGGTTTTTCCCATCCGTTT +
Preference number: 5 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQLQNRA*GFSHPF
Trigger: AAACGGATGGGAAAAACCCAAAGCCCTGTTCTGAAG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGCTCAGCCTAGCCAGCGCTTTCTTCTCACTCACACTCTCTGCCCACATCAGGCATTCAGTCTTGCTCTaGGCTACTTTAGCCACTGTT +
Preference number: 5 (lower is better)
Translates to: LLSLASAFFSLTLSAHIRHSVLL*ATLATV
Trigger: AACAGTGGCTAAAGTAGCCAAGAGCAAGACTGAATG...CCTGATGTGGGCAGAGAGTGTGAGTGAGAAGAAAGCGCTGGCTAGGCTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTACACAGACTCAGCAATaGGATTTTTCTTCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: PLRPAELHTAARSWYALFTQTQQ*DFSSLD
Trigger: GTCCAAAGAAGAAAAATCCAATTGCTGAGTCTGTGT...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAATCAGGAAGCACTCCTaGGCTACCCCAGTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLIRKHS*ATPVCH
Trigger: GTGACAGACTGGGGTAGCCAAGGAGTGCTTCCTGAT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS TCA 90 bp AGGGCCAGATTGAGGTGTTTCTGGAGGAGACTGTGGGGGTTGGATTaGAGCCACAATCTGAGAAAGCACTGTGCTTGCTTTCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: RARLRCFWRRLWGLD*SHNLRKHCACFLSG
Trigger: ACCAGAGAGAAAGCAAGCACAGTGCTTTCTCAGATTGTGGCTTCAATCCAACCCCCACAGTCTCCTCCAGAAACACCTCAATCTGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS TCA 90 bp AAACCGCATCACCTGCCTCACAACATGGTTTGTCACTGGTTAGCCTaGAGTCTGACCAGCTGTCCACTCCAAAACGGAGCTGGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: KPHHLPHNMVCHWLA*SLTSCPLQNGAGLS
Trigger: AGAAAGACCAGCTCCGTTTTGGAGTGGACAGCTGGTCAGACTTCAGGCTAACCAGTGACAAACCATGTTGTGAGGCAGGTGATGCGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 90 bp CGAACAGGAGACAATGTGTTTGCTCTGAAGTTGGCAAAGCGAGGTTaGCCTCTCATGCGAATCTCCATGGCCAACAGCTCTTCATCACTC +
Preference number: 5 (lower is better)
Translates to: RTGDNVFALKLAKRG*PLMRISMANSSSSL
Trigger: GAGTGATGAAGAGCTGTTGGCCATGGAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAACTTCAGAGCAAACACATTGTCTCCTGTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 90 bp GCTCACTGGCCATGGCTGCTGACACATCCACGACAGTATATGGCTTaGACAATGGCTGTTCCAGGTTCACAACTCGGTAAGGTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: AHWPWLLTHPRQYMA*TMAVPGSQLGKVLL
Trigger: AAGCAAAACCTTACCGAGTTGTGAACCTGGAACAGCCATTGTGCAAGCCATATACTGTCGTGGATGTGTCAGCAGCCATGGCCAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 90 bp AAGCCACAATCTGAGAAAGCACTGTGCTTGCTTTCTCTCTGGTGCTaGTGCTGCCCACCATCTGAGACTCCTGAGTGCCTTCTATTTTGG +
Preference number: 5 (lower is better)
Translates to: KPQSEKALCLLSLWC*CCPPSETPECLLFW
Trigger: CCAAAATAGAAGGCACTCAGGAGTCTCAGATGGTGGGCAGCAGCAGCACCAGAGAGAAAGCAAGCACAGTGCTTTCTCAGATTGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS GCA 90 bp GGTAGGGACAATGCTGTTGTGACTGAAGTGCAGCCCCTGCCATCTTaGTTCCCAACAACAGTTCTTGGATCCCGAGGAGAAAAATCCTCT +
Preference number: 5 (lower is better)
Translates to: GRDNAVVTEVQPLPS*FPTTVLGSRGEKSS
Trigger: AGAGGATTTTTCTCCTCGGGATCCAAGAACTGTTGTTGGGAAGCAAGATGGCAGGGGCTGCACTTCAGTCACAACAGCATTGTCCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS GCA 90 bp AGCAGCAGACACACCTGCCTCTCATACAAATCAGGGCTTTTCCCATaGTGGGCCAGAGAGTCTCGCACAAAATCAGCCACAGTAAGACAT +
Preference number: 5 (lower is better)
Translates to: SSRHTCLSYKSGLFP*WARESRTKSATVRH
Trigger: ATGTCTTACTGTGGCTGATTTTGTGCGAGACTCTCTGGCCCAGCATGGGAAAAGCCCTGATTTGTATGAGAGGCAGGTGTGTCTGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 90 bp TTGGCTCTTATGATCATCTTCTTTGGCAGTGGGGGTGGTGTAGGTTaGGAAGCATTGGGTGCTTCTTGGTCTGTTTTCCCTCCAAAGGCG +
Preference number: 5 (lower is better)
Translates to: LALMIIFFGSGGGVG*EALGASWSVFPPKA
Trigger: CGCCTTTGGAGGGAAAACAGACCAAGAAGCACCCAATGCTTCCCAACCTACACCACCCCCACTGCCAAAGAAGATGATCATAAGAGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 90 bp AGCAGACACACCTGCCTCTCATACAAATCAGGGCTTTTCCCATGCTaGGCCAGAGAGTCTCGCACAAAATCAGCCACAGTAAGACATGGA +
Preference number: 5 (lower is better)
Translates to: SRHTCLSYKSGLFPC*ARESRTKSATVRHG
Trigger: TCCATGTCTTACTGTGGCTGATTTTGTGCGAGACTCTCTGGCCCAGCATGGGAAAAGCCCTGATTTGTATGAGAGGCAGGTGTGTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 90 bp GCAAACTTGATCATGAGCAGTGTTCGCTTGATGTCTAGCCAGTTTTaGAGCAGGGTGTTCCTCTGTACTAGGCTAGGGCAGGCGGTGAAA +
Preference number: 5 (lower is better)
Translates to: ANLIMSSVRLMSSQF*SRVFLCTRLGQAVK
Trigger: TTTCACCGCCTGCCCTAGCCTAGTACAGAGGAACACCCTGCTCCAAAACTGGCTAGACATCAAGCGAACACTGCTCATGATCAAGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 90 bp GTTGGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTaGAGTTTGCTAGAGGTCCACTCTAGACCCTTTTTGCCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: VGFPSNRQDPQLQVC*SLLEVHSRPFLPGC
Trigger: ACACCCAGGCAAAAAGGGTCTAGAGTGGACCTCTAGCAAACTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS-3UTR CAA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCACAGGAGGCCGGAAATaGCCCGTGTTCCTGATGCGG +
Preference number: 5 (lower is better)
Translates to: AKVPLHSPECSRLLKPKITGGRK*PVFLMR
Trigger: CCGCATCAGGAACACGGGCAATTTCCGGCCTCCTGT...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGCTCACCACATATACTTaGCCCATCTGCCACTATCAT +
Preference number: 5 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQLTTYT*PICHYH
Trigger: ATGATAGTGGCAGATGGGCAAAGTATATGTGGTGAG...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TCTGAGGAGGTCAGCAGTCTCATCAGTGGCCTTCTTCCTCTCCCCTGCCTACGGTTAACAGGGATGGTTTaGGAGGAAATGTTTGTAGCT +
Preference number: 5 (lower is better)
Translates to: SEEVSSLISGLLPLPCLRLTGMV*EEMFVA
Trigger: AGCTACAAACATTTCCTCCAAAACCATCCCTGTTAA...CCGTAGGCAGGGGAGAGGAAGAAGGCCACTGATGAGACTGCTGACCTCCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTTCCCAACAACAGTTCTaGGATCCCGAGGAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: CILSGLQVFLDQTGGQAASQQQF*DPEEKN
Trigger: ATTTTTCTCCTCGGGATCCAAGAACTGTTGTTGGGA...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTCGTCCACAGCTCCCTaGGGCTGTCGTGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSSSTAP*GCRGCL
Trigger: CAAGCAGCCACGACAGCCCAAGGGAGCTGTGGACGA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGGATTTTTGGAGGTCCTaGGAGATTGGCTCTGTATTG +
Preference number: 5 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQDFWRS*EIGSVL
Trigger: CAATACAGAGCCAATCTCCAAGGACCTCCAAAAATC...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGGGACAGGTCTCTCCTaGCGCAAAGGCCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVGTGLS*RKGLSK
Trigger: CTTGGAAAGGCCTTTGCGCAAGGAGAGACCTGTCCC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAGGGACAGGTCTCTCCTaGCGCAAAGGCCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: ESDRMASLRTTNGILRNEGTGLS*RKGLSK
Trigger: CTTGGAAAGGCCTTTGCGCAAGGAGAGACCTGTCCC...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGTCAATATGCAAGACATaGCAAGATGGGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRSICKT*QDGRWG
Trigger: CCCCCACCTCCCATCTTGCAATGTCTTGCATATTGA...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCGTTATTCTTCATGAATaGGCTTCTAGGCAACCCAGT +
Preference number: 5 (lower is better)
Translates to: GQSGESGSGSRGETIRAVVILHE*ASRQPS
Trigger: ACTGGGTTGCCTAGAAGCCAATTCATGAAGAATAAC...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGATAAGGAAGCATAATTaGCTAGGCCTTGGAGAGGAG +
Preference number: 5 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQIRKHN*LGLGEE
Trigger: CTCCTCTCCAAGGCCTAGCAAATTATGCTTCCTTAT...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CCACTCAGGCCAGCAGAGCTTCACACAGCAGCCCGGTCCTGGTACGCTCTGTTTAGAAAGCTTAAACATTaGGGTTCTTCTGTGACTTCT +
Preference number: 5 (lower is better)
Translates to: PLRPAELHTAARSWYALFRKLKH*GSSVTS
Trigger: AGAAGTCACAGAAGAACCCAAATGTTTAAGCTTTCT...AAACAGAGCGTACCAGGACCGGGCTGCTGTGTGAAGCTCTGCTGGCCTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTCGCAGCCCTGTCCCTaGTCAGTTTACCACTGTGCC +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVSQPCP*SVYHCA
Trigger: GGCACAGTGGTAAACTGACAAGGGACAGGGCTGCGA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS TCA 90 bp CTTTTCCATCTTCCCTTTCCAGTTCAGGTAGGGACAATGCTGTTGTaGCTGAAGTGCAGCCCCTGCCATCTTGCTTCCCAACAACAGTTC +
Preference number: 5 (lower is better)
Translates to: LFHLPFPVQVGTMLL*LKCSPCHLASQQQF
Trigger: GAACTGTTGTTGGGAAGCAAGATGGCAGGGGCTGCACTTCAGTCACAACAGCATTGTCCCTACCTGAACTGGAAAGGGAAGATGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS GCA 90 bp TTAAGCTGGAAATGCTGTTTGCTGCTGAGGGGACAGGTCTCTCCTTaGGCAAAGGCCTTTCCAAGGAGTCATAAGACTCAATGTCCAGTC +
Preference number: 5 (lower is better)
Translates to: LSWKCCLLLRGQVSP*AKAFPRSHKTQCPV
Trigger: GACTGGACATTGAGTCTTATGACTCCTTGGAAAGGCCTTTGCGCAAGGAGAGACCTGTCCCCTCAGCAGCAAACAGCATTTCCAGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 90 bp CTGAAGTCTGACCAGCTGTCCACTCCAAAACGGAGCTGGTCTTTCTaGCCAGCCATGAAAAGGTCTTCGCATTTAACAGCCAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LKSDQLSTPKRSWSF*PAMKRSSHLTASFF
Trigger: GAAGAAACTGGCTGTTAAATGCGAAGACCTTTTCATGGCTGGGCAGAAAGACCAGCTCCGTTTTGGAGTGGACAGCTGGTCAGACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 90 bp TGGCTCTGTATTGGCTCTTATGATCATCTTCTTTGGCAGTGGGGGTaGTGTAGGTTGGGAAGCATTGGGTGCTTCTTGGTCTGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: WLCIGSYDHLLWQWG*CRLGSIGCFLVCFP
Trigger: GGGAAAACAGACCAAGAAGCACCCAATGCTTCCCAACCTACACCACCCCCACTGCCAAAGAAGATGATCATAAGAGCCAATACAGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 90 bp GTCCTTGGAGATTGGCTCTGTATTGGCTCTTATGATCATCTTCTTTaGCAGTGGGGGTGGTGTAGGTTGGGAAGCATTGGGTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VLGDWLCIGSYDHLL*QWGWCRLGSIGCFL
Trigger: CAAGAAGCACCCAATGCTTCCCAACCTACACCACCCCCACTGCCAAAGAAGATGATCATAAGAGCCAATACAGAGCCAATCTCCAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 90 bp TTCTTCAGTCTCTTCCATGTCATCCTCATCCTTTTCAGGGTCATCTaGATCCTCCCAGGGAAGCAGACGGTTAGGGACTTCAGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: FFSLFHVILILFRVI*ILPGKQTVRDFSKE
Trigger: TTCCTTGCTGAAGTCCCTAACCGTCTGCTTCCCTGGGAGGATCCAGATGACCCTGAAAAGGATGAGGATGACATGGAAGAGACTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAGACAGTCAGTGGTTTaGCTAGTGGTGTTATCAGGC +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIRQSVV*LVVLSG
Trigger: GCCTGATAACACCACTAGCAAAACCACTGACTGTCT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGGGCTAGTCACTAATTaGGAGGGAGAGGGGGTGACT +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHGLVTN*EGEGVT
Trigger: AGTCACCCCCTCTCCCTCCAAATTAGTGACTAGCCC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGTAGGGCTGGTTGGCTaGGTCCAGTTGGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVVGLVG*VQLVKC
Trigger: GCATTTCACCAACTGGACCAAGCCAACCAGCCCTAC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAGTAGGGCTGGTTGGCTaGGTCCAGTTGGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: ESDRMASLRTTNGILRNEVGLVG*VQLVKC
Trigger: GCATTTCACCAACTGGACCAAGCCAACCAGCCCTAC...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCACACTGAGCTGGCCTaGAGCAGGGTCGCACCTGTA +
Preference number: 5 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHHTELA*SRVAPV
Trigger: TACAGGTGCGACCCTGCTCAAGGCCAGCTCAGTGTG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACTAAGTTGCTGTATGTaGCACTACAAGGGTTCGGGT +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFILSCCM*HYKGSG
Trigger: ACCCGAACCCTTGTAGTGCAACATACAGCAACTTAG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTCTAGATTGCCCTAAGTaGCTGTATGTTGCACTACAA +
Preference number: 5 (lower is better)
Translates to: CILSGLQVFLDQTGGQAALDCPK*LYVALQ
Trigger: TTGTAGTGCAACATACAGCAACTTAGGGCAATCTAG...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCTTTTCTCTGGCTAGTTaGCATTCATCTTTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: GQSGESGSGSRGETIRAVFSLAS*HSSFAL
Trigger: AAGGGCAAAAGATGAATGCAAACTAGCCAGAGAAAA...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GTCCCTTGTCAGTTTACCACTGTGCCTGACTCTCCCCCAATAAAGGGTCCAGGTATCTTGCTTCTGTATTaGCCTCATGCCAAAATGCCC +
Preference number: 5 (lower is better)
Translates to: VPCQFTTVPDSPPIKGPGILLLY*PHAKMP
Trigger: GGGCATTTTGGCATGAGGCAAATACAGAAGCAAGAT...ACCTGGACCCTTTATTGGGGGAGAGTCAGGCACAGTGGTAAACTGACAAGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAAAGGCATGCGAATCTaGCAGATGATGCAGTACCAG +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIKGMRI*QMMQYQ
Trigger: CTGGTACTGCATCATCTGCAAGATTCGCATGCCTTT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAATAATGCGGCAGTTGTaGCTACCACTGCTGACTCTT +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIIMRQL*LPLLTL
Trigger: AAGAGTCAGCAGTGGTAGCAACAACTGCCGCATTAT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAGCAGAGACACCGGGTaGGAGACAGTGTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHSRDTG*ETVSTV
Trigger: TACAGTGGACACTGTCTCCAACCCGGTGTCTCTGCT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGTCTCTGTGGCTTAGGTaGAAAGACAACACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTSLWLR*KDNTLQ
Trigger: CTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS GCA 90 bp ATCTCCATGGCCAACAGCTCTTCATCACTCTCATCCCAACTCTCGTaGTCCTCCTCCATGTTACTGAAAAGTACATCCTCTTCACTCTCC +
Preference number: 5 (lower is better)
Translates to: ISMANSSSSLSSQLS*SSSMLLKSTSSSLS
Trigger: GGAGAGTGAAGAGGATGTACTTTTCAGTAACATGGAGGAGGAGCACGAGAGTTGGGATGAGAGTGATGAAGAGCTGTTGGCCATGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 90 bp ACATTGCCATGGGTGATGGGTGCCTTCTCAGGGTCTGGGGGAAGCTaGTGCAAACTTTTAGGTTTAAAGCAATTCTTGCATTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: TLPWVMGAFSGSGGS*CKLLGLKQFLHSPG
Trigger: ACCTGGTGAATGCAAGAATTGCTTTAAACCTAAAAGTTTGCACCAGCTTCCCCCAGACCCTGAGAAGGCACCCATCACCCATGGCAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000565820.5
ENST00000682557.1
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGCTCTGAATGCTTCCTaGTCCATAAGAGACCACAGA +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLALNAS*SIRDHR
Trigger: TCTGTGGTCTCTTATGGACAAGGAAGCATTCAGAGC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCACTTTTATTGAGCTTTaGGAAGCCTGTGATGAATCT +
Preference number: 5 (lower is better)
Translates to: GQSGESGSGSRGETIRAVTFIEL*EACDES
Trigger: AGATTCATCACAGGCTTCCAAAAGCTCAATAAAAGT...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGAGAAAGCACTGTGCTaGCTTTCTCTCTGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHEKALC*LSLWCC
Trigger: GCAGCACCAGAGAGAAAGCAAGCACAGTGCTTTCTC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGATGTAAAGAGAGATTaGGGCCGGACTGGCGTACTC +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVDVKRD*GRTGVL
Trigger: GAGTACGCCAGTCCGGCCCAAATCTCTCTTTACATC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGATGTAAAGAGAGATTaGGGCCGGACTGGCGTACTC +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHDVKRD*GRTGVL
Trigger: GAGTACGCCAGTCCGGCCCAAATCTCTCTTTACATC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGTCTCGCTCTTTCTCTTaGTCATCCTCCTCATCTGTT +
Preference number: 5 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTSRSFS*SSSSSV
Trigger: AACAGATGAGGAGGATGACAAAGAGAAAGAGCGAGA...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAATGAGCAGTGTTCGCTaGATGTCTAGCCAGTTTTGG +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLMSSVR*MSSQFW
Trigger: CCAAAACTGGCTAGACATCAAGCGAACACTGCTCAT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATATTGGTGACACCACCTaGGGTCAGCTCTGTAATGGG +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHIGDTT*GQLCNG
Trigger: CCCATTACAGAGCTGACCCAAGGTGGTGTCACCAAT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATATTGGTGACACCACCTaGGGTCAGCTCTGTAATGGG +
Preference number: 5 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHIGDTT*GQLCNG
Trigger: CCCATTACAGAGCTGACCCAAGGTGGTGTCACCAAT...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GGACAGAGTGGAGAATCAGGCAGTGGCAGCAGAGGGGAGACTATTAGGGCTGTCCACATACTCACAGTTTaGAATAAAACAAGCACAGGT +
Preference number: 5 (lower is better)
Translates to: GQSGESGSGSRGETIRAVHILTV*NKTSTG
Trigger: ACCTGTGCTTGTTTTATTCAAAACTGTGAGTATGTG...GACAGCCCTAATAGTCTCCCCTCTGCTGCCACTGCCTGATTCTCCACTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAGCTATACATTCAGTCTaGCTCTTGGCTACTTTAGCC +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIAIHSV*LLATLA
Trigger: GGCTAAAGTAGCCAAGAGCAAGACTGAATGTATAGC...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCGGCTGTATAGCACCTaGTACCTTCTGGGCACTTAC +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVRLYST*YLLGTY
Trigger: GTAAGTGCCCAGAAGGTACAAGGTGCTATACAGCCG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTTCAGTGAAGGTCTGACAGGGAAAGGTGCTGGCCCTACAGGGAAGCTACAGAAATTTCAAGGTGCTTaGGGTCTTTCCAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: EFSEGLTGKGAGPTGKLQKFQGA*GLSKMN
Trigger: ATTCATCTTGGAAAGACCCAAAGCACCTTGAAATTT...CTGTAGCTTCCCTGTAGGGCCAGCACCTTTCCCTGTCAGACCTTCACTGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGTCTCTGGAACTTTTATaGAGCTTTTGGAAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTSLELL*SFWKPV
Trigger: CACAGGCTTCCAAAAGCTCAATAAAAGTTCCAGAGA...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGTTCTTCCTTCTCAGTTaGTACAGCAATCTTGCCATC +
Preference number: 5 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRFFLLS*YSNLAI
Trigger: GATGGCAAGATTGCTGTACAAACTGAGAAGGAAGAA...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGACGACAGTATATGGCTaGCACAATGGCTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVTTVYG*HNGCSR
Trigger: CCTGGAACAGCCATTGTGCAAGCCATATACTGTCGT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGAGGGCTAGTCACTAATTaGGAGGGAGAGGGGGTGACT +
Preference number: 5 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRGLVTN*EGEGVT
Trigger: AGTCACCCCCTCTCCCTCCAAATTAGTGACTAGCCC...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGGGCTAGTCACTAATTaGGAGGGAGAGGGGGTGACT +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSGLVTN*EGEGVT
Trigger: AGTCACCCCCTCTCCCTCCAAATTAGTGACTAGCCC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGTTGGCTTGGTCCAGTaGGTGAAATGCCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHVGLVQ*VKCLCK
Trigger: TTTGCAGAGGCATTTCACCAACTGGACCAAGCCAAC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGGAGGTCCTTGGAGATaGGCTCTGTATTGGCTCTTA +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHGGPWR*ALYWLL
Trigger: TAAGAGCCAATACAGAGCCAATCTCCAAGGACCTCC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTCCTCGATAAAGTGCTaGTCTCTGCGGCTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVSSIKC*SLRLLD
Trigger: ATCCAGAAGCCGCAGAGACAAGCACTTTATCGAGGA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATGCCTCACAACATGGTTaGTCACTGGTTAGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHASQHG*SLVSLK
Trigger: CTTCAGGCTAACCAGTGACAAACCATGTTGTGAGGC...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCCATCCGTTTCTCCTTaGGCGTCTTCTTCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHPSVSP*ASSSVS
Trigger: AGAGACTGAAGAAGACGCCAAAGGAGAAACGGATGG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTGCGATGGCGTGATCTaGGCTCACTGCAACCTTTGC +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSCDGVI*AHCNLC
Trigger: GCAAAGGTTGCAGTGAGCCAAGATCACGCCATCGCA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAAAAACATGCCAGGGTaGGCCCAGCAAGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHKNMPG*AQQVQF
Trigger: AAACTGGACTTGCTGGGCCAACCCTGGCATGTTTTT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCAGCAAGAGCAGCACTaGGATTTGTCTCGGCACAGC +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSQQEQH*DLSRHS
Trigger: GCTGTGCCGAGACAAATCCAAGTGCTGCTCTTGCTG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCTTATGGCACCGTTTTaGGTCCATGGAATCCCCACT +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLMAPF*VHGIPT
Trigger: AGTGGGGATTCCATGGACCAAAAACGGTGCCATAAG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCTGTGTCCCTGGGGATaGTCTGGTCAGGCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGLCPWG*SGQACC
Trigger: ACAGCAAGCCTGACCAGACAATCCCCAGGGACACAG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCTCCCAGTGGAGCTTTaGTTACACTTCAGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLPVEL*LHFSLR
Trigger: ACGAAGGCTGAAGTGTAACAAAAGCTCCACTGGGAG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAATGCCAACTGCAGTTCTaGGCTCCTATGGCACTAATG +
Preference number: 5 (lower is better)
Translates to: ESDRMASLRTTNGILRNECQLQF*APMALM
Trigger: CATTAGTGCCATAGGAGCCAAGAACTGCAGTTGGCA...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTATCCTTTCAGGGCTCCAGGTGTTTCTGGACCAAACTGGGGGTCAGGCTGCTATGTCTTGTATATATTaGCTCAAGCATGGAGCTCTT +
Preference number: 5 (lower is better)
Translates to: CILSGLQVFLDQTGGQAAMSCIY*LKHGAL
Trigger: AAGAGCTCCATGCTTGAGCAAATATATACAAGACAT...AGCAGCCTGACCCCCAGTTTGGTCCAGAAACACCTGGAGCCCTGAAAGGATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TCTCTGTGGCTTAGGTTGAAAGACAACACTCTGCAGGCATGGAGCTGCCAAAGGTTTGAGCACTTACTATaGCCTGGCAGTGGACTAAAT +
Preference number: 5 (lower is better)
Translates to: SLWLRLKDNTLQAWSCQRFEHLL*PGSGLN
Trigger: ATTTAGTCCACTGCCAGGCAATAGTAAGTGCTCAAA...CCTTTGGCAGCTCCATGCCTGCAGAGTGTTGTCTTTCAACCTAAGCCACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATCAGCCAGGAGATATTaGGAAAGCTGGAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLSARRY*ESWRNC
Trigger: GCAATTTCTCCAGCTTTCCAAATATCTCCTGGCTGA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS TCA 90 bp GATCTTTGCTGGGGAGCTGTGGCTGGAACTATAGCTTCTCTGTGGTaGAGACTGACCTCTGTTGAGACAGTTGTTAAACTCTTGAACCTT +
Preference number: 5 (lower is better)
Translates to: DLCWGAVAGTIASLW*RLTSVETVVKLLNL
Trigger: AAGGTTCAAGAGTTTAACAACTGTCTCAACAGAGGTCAGTCTTCACCACAGAGAAGCTATAGTTCCAGCCACAGCTCCCCAGCAAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000682557.1
CDS TCA 90 bp AAACTTCCCTTCTCGCCTCATTTCATTCATTTCATCTTCCATCACTaGTACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCGTCT +
Preference number: 5 (lower is better)
Translates to: KLPFSPHFIHFIFHH*YPFFQLIASAPEAS
Trigger: AGACGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGATGAAATGAATGAAATGAGGCGAGAAGGGAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 90 bp CTTATTCTGCCTCAGGCTTTGCTTTTCAGAAGGAAGGAAAGTGTGTaGCACTCAAGGGAGACAGGTAAGAAGTCACTGAGCATTCAAGGA +
Preference number: 5 (lower is better)
Translates to: LILPQALLFRRKESV*HSRETGKKSLSIQG
Trigger: TCCTTGAATGCTCAGTGACTTCTTACCTGTCTCCCTTGAGTGCCACACACTTTCCTTCCTTCTGAAAAGCAAAGCCTGAGGCAGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATCTCTGGAACTTTTATaGAGCTTTTGGAAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLSLELL*SFWKPV
Trigger: CACAGGCTTCCAAAAGCTCAATAAAAGTTCCAGAGA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGAGAGCAAGGACTGCTTaGTGGGTCTCTGGAACTTTT +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVRARTA*WVSGTF
Trigger: AAAAGTTCCAGAGACCCACAAAGCAGTCCTTGCTCT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATAGAGCAAGGACTGCTTaGTGGGTCTCTGGAACTTTT +
Preference number: 5 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHRARTA*WVSGTF
Trigger: AAAAGTTCCAGAGACCCACAAAGCAGTCCTTGCTCT...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGATGAGCTTTTTGTCTaGGGGCTGTTAACAGGGCCC +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSDELFV*GLLTGP
Trigger: GGGCCCTGTTAACAGCCCCAAGACAAAAAGCTCATC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGAGATGAGCTTTTTGTCTaGGGGCTGTTAACAGGGCCC +
Preference number: 5 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRDELFV*GLLTGP
Trigger: GGGCCCTGTTAACAGCCCCAAGACAAAAAGCTCATC...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAAGAAGTCCATACTTCTaGGTATCGAATTGCACTGGA +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLRSPYF*VSNCTG
Trigger: TCCAGTGCAATTCGATACCAAGAAGTATGGACTTCT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAAACTGTGGGGGTTGGATaGAAGCCACAATCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: ESDRMASLRTTNGILRNETVGVG*KPQSEK
Trigger: TTTCTCAGATTGTGGCTTCAATCCAACCCCCACAGT...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCGGGTCTTTCTGTACTTaGGTGGTAGGACTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: AKVPLHSPECSRLLKPKIGSFCT*VVGLSV
Trigger: CACAGACAGTCCTACCACCAAAGTACAGAAAGACCC...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACACACTGAGCTGGCCTaGAGCAGGGTCGCACCTGTA +
Preference number: 5 (lower is better)
Translates to: ICLAELNIILLGLSLNTQHTELA*SRVAPV
Trigger: TACAGGTGCGACCCTGCTCAAGGCCAGCTCAGTGTG...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAGAAACATCCACTGAATaGCTTCCAAGACTAGGTTAC +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLETSTE*LPRLGY
Trigger: GTAACCTAGTCTTGGAAGCAATTCAGTGGATGTTTC...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAATTCATAACTCAAAATaGAGACGCTTAGTAGGACCC +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIIHNSK*RRLVGP
Trigger: GGGTCCTACTAAGCGTCTCAATTTTGAGTTATGAAT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATGCTAATAACTTGGTTTaGTGGGCAGCCATCCTGTTC +
Preference number: 5 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHANNLV*WAAILF
Trigger: GAACAGGATGGCTGCCCACAAAACCAAGTTATTAGC...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATACTCAAGGAAGTCAGTTaGTGTCCAAAAAGCCTATTT +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFILKEVS*CPKSLF
Trigger: AAATAGGCTTTTTGGACACAAACTGACTTCCTTGAG...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCCCAGTCTGTCACAATaGGAGCAAACACCCATAGGC +
Preference number: 5 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHPSLSQ*EQTPIG
Trigger: GCCTATGGGTGTTTGCTCCAATTGTGACAGACTGGG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGTCTGCTCAGGGGCCTaGAGAGGAAATGTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSVCSGA*RGNVSK
Trigger: CTTTGAGACATTTCCTCTCAAGGCCCCTGAGCAGAC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAATTGTACCAGCACATaGGATAAACTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFINCTST*DKLPSL
Trigger: AAGGGAAGGAAGTTTATCCAATGTGCTGGTACAATT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS GCA 90 bp TTGTTCTCACAGTGTTCTTGGATGCTAAGCTCACCACATATACTTTaGCCATCTGCCACTATCATAGTGGGCTTCACAGCTATAGTGGGT +
Preference number: 5 (lower is better)
Translates to: LFSQCSWMLSSPHIL*PSATIIVGFTAIVG
Trigger: ACCCACTATAGCTGTGAAGCCCACTATGATAGTGGCAGATGGGCAAAGTATATGTGGTGAGCTTAGCATCCAAGAACACTGTGAGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 90 bp GGTTTTGCTTGCTCTTCTGTGGGGACAAGGTTTATGGTTACTGCTTaGCCAGCAACATCTGTAGAGGCTTTACTTTCTTCCTTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: GFACSSVGTRFMVTA*PATSVEALLSSFSV
Trigger: AACTGAGAAGGAAGAAAGTAAAGCCTCTACAGATGTTGCTGGGCAAGCAGTAACCATAAACCTTGTCCCCACAGAAGAGCAAGCAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 90 bp GTAAGGTTTTGCTTGCTCTTCTGTGGGGACAAGGTTTATGGTTACTaGTTGCCCAGCAACATCTGTAGAGGCTTTACTTTCTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: VRFCLLFCGDKVYGY*LPSNICRGFTFFLL
Trigger: GAGAAGGAAGAAAGTAAAGCCTCTACAGATGTTGCTGGGCAAGCAGTAACCATAAACCTTGTCCCCACAGAAGAGCAAGCAAAACCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 90 bp TTTCGGTTCCACCCTATGATGACAGGTTTGTTCTCACAGTGTTCTTaGATGCTAAGCTCACCACATATACTTTGCCCATCTGCCACTATC +
Preference number: 5 (lower is better)
Translates to: FRFHPMMTGLFSQCS*MLSSPHILCPSATI
Trigger: GATAGTGGCAGATGGGCAAAGTATATGTGGTGAGCTTAGCATCCAAGAACACTGTGAGAACAAACCTGTCATCATAGGGTGGAACCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 90 bp GACACAAAGACTACTTTCCATGGATTTTTGGAGGTCCTTGGAGATTaGCTCTGTATTGGCTCTTATGATCATCTTCTTTGGCAGTGGGGG +
Preference number: 5 (lower is better)
Translates to: DTKTTFHGFLEVLGD*LCIGSYDHLLWQWG
Trigger: CCCCCACTGCCAAAGAAGATGATCATAAGAGCCAATACAGAGCCAATCTCCAAGGACCTCCAAAAATCCATGGAAAGTAGTCTTTGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAAATTTCAAGGTGCTTaGGGTCTTTCCAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIKFQGA*GLSKMN
Trigger: ATTCATCTTGGAAAGACCCAAAGCACCTTGAAATTT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCACCTATCATGCAACTaGGTGGAAGCTTTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVHLSCN*VEAFFP
Trigger: TGGAAAGAAAGCTTCCACCAAGTTGCATGATAGGTG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGTTGGCAAAGCGAGGTaGCCCTCTCATGCGAATCTC +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSVGKAR*PSHANL
Trigger: GAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAAC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCAACTCGGTAAGGTTTaGCTTGCTCTTCTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHQLGKV*LALLWG
Trigger: TCCCCACAGAAGAGCAAGCAAAACCTTACCGAGTTG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGAACGACAGTATATGGCTaGCACAATGGCTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRTTVYG*HNGCSR
Trigger: CCTGGAACAGCCATTGTGCAAGCCATATACTGTCGT...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTGTGACAGTTTTTCCTaGGAGGAACATTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVCDSFS*EEHLVQ
Trigger: CTGGACCAAATGTTCCTCCAAGGAAAAACTGTCACA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGGCTCTCTGGATCTTaGCTGGGGAGCTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYWLSGS*LGSCGW
Trigger: CCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCCA...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp CAGGGTTGGCCCAGCAAGTCCAGTTTGTCTCACCCCTCTCCAAGAATGTTCATAAGGGATTCCATGCTGTaGGAAAATCTATCCTTAATA +
Preference number: 5 (lower is better)
Translates to: QGWPSKSSLSHPSPRMFIRDSML*ENLSLI
Trigger: TATTAAGGATAGATTTTCCAACAGCATGGAATCCCT...TATGAACATTCTTGGAGAGGGGTGAGACAAACTGGACTTGCTGGGCCAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTTCTCATCAAAGGGGTaGGGTAGGTGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSFSSKG*GRCSIS
Trigger: TGAGATGCTGCACCTACCCAACCCCTTTGATGAGAA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTATCCGCTCAGAAGGGTaGGGATTCAGGAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPIRSEG*GFRRQL
Trigger: CAGCTGCCTCCTGAATCCCAACCCTTCTGAGCGGAT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCACTGGAGGATGCCTTaGGCGTCTGAAATGAGGATC +
Preference number: 5 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGHWRMP*ASEMRI
Trigger: GATCCTCATTTCAGACGCCAAAGGCATCCTCCAGTG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CTGAATCAGTTGTTATGGAGTCCTGCATTAGTGAGACCTGGCCTGGCACACACGACCACGAACATGACATaGAGAAGGTATATCTCAATA +
Preference number: 5 (lower is better)
Translates to: LNQLLWSPALVRPGLAHTTTNMT*RRYISI
Trigger: TATTGAGATATACCTTCTCAATGTCATGTTCGTGGT...CGTGTGTGCCAGGCCAGGTCTCACTAATGCAGGACTCCATAACAACTGATTCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGGATATGAAGAGGTGCTaGGTTTACCAGTGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVDMKRC*VYQCCK
Trigger: CTTACAGCACTGGTAAACCAAGCACCTCTTCATATC...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTATTTTCTCTGGCTAGTTaGCATTCATCTTTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLFSLAS*HSSFAL
Trigger: AAGGGCAAAAGATGAATGCAAACTAGCCAGAGAAAA...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAACAAGTGTCACAGAGATaGTTCATGCTCATGTGGCTT +
Preference number: 5 (lower is better)
Translates to: ESDRMASLRTTNGILRNEQVSQR*FMLMWL
Trigger: AAGCCACATGAGCATGAACAATCTCTGTGACACTTG...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTGCGATGGCGTGATCTaGGCTCACTGCAACCTTTGC +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSCDGVI*AHCNLC
Trigger: GCAAAGGTTGCAGTGAGCCAAGATCACGCCATCGCA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCGTTGGCAAAGCGAGGTaGCCCTCTCATGCGAATCTC +
Preference number: 5 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCVGKAR*PSHANL
Trigger: GAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAAC...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGTGTTTGCTCTGAAGTaGGCAAAGCGAGGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSVFALK*AKRGCP
Trigger: AGGGCAACCTCGCTTTGCCAACTTCAGAGCAAACAC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAGAAGTCCATACTTCTaGGTATCGAATTGCACTGGA +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHRSPYF*VSNCTG
Trigger: TCCAGTGCAATTCGATACCAAGAAGTATGGACTTCT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TCCTATTTCACCCACATGCTAAATAACTATAAATTGCTTGCTTACCACCCTCCAGAGAAAGCACTGTGCTaGCTTTCTCTCTGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SYFTHMLNNYKLLAYHPPEKALC*LSLWCC
Trigger: GCAGCACCAGAGAGAAAGCAAGCACAGTGCTTTCTC...TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAGCATGTGGGTGAAATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGGGTCTTTCTGTACTTaGGTGGTAGGACTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGGSFCT*VVGLSV
Trigger: CACAGACAGTCCTACCACCAAAGTACAGAAAGACCC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTGGGTCTTTCTGTACTTaGGTGGTAGGACTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGGSFCT*VVGLSV
Trigger: CACAGACAGTCCTACCACCAAAGTACAGAAAGACCC...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGTTGGCTTGGTCCAGTaGGTGAAATGCCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGVGLVQ*VKCLCK
Trigger: TTTGCAGAGGCATTTCACCAACTGGACCAAGCCAAC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAAGTAGGGCTGGTTGGCTaGGTCCAGTTGGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: ICLAELNIILLGLSLNTQVGLVG*VQLVKC
Trigger: GCATTTCACCAACTGGACCAAGCCAACCAGCCCTAC...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATCTAGATTGCCCTAAGTaGCTGTATGTTGCACTACAA +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLDCPK*LYVALQ
Trigger: TTGTAGTGCAACATACAGCAACTTAGGGCAATCTAG...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAGTAGGTTGGGAAGCATaGGGTGCTTCTTGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGVGWEA*GASWSV
Trigger: AACAGACCAAGAAGCACCCAATGCTTCCCAACCTAC...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATCCTCGATAAAGTGCTaGTCTCTGCGGCTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGSSIKC*SLRLLD
Trigger: ATCCAGAAGCCGCAGAGACAAGCACTTTATCGAGGA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCTTCAGAACAGGGCTTaGGGTTTTTCCCATCCGTTT +
Preference number: 5 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHLQNRA*GFSHPF
Trigger: AAACGGATGGGAAAAACCCAAAGCCCTGTTCTGAAG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATTCTCATCAAAGGGGTaGGGTAGGTGCAGCATCTCA +
Preference number: 5 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGFSSKG*GRCSIS
Trigger: TGAGATGCTGCACCTACCCAACCCCTTTGATGAGAA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTATGAGCAGTGTTCGCTaGATGTCTAGCCAGTTTTGG +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSMSSVR*MSSQFW
Trigger: CCAAAACTGGCTAGACATCAAGCGAACACTGCTCAT...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACACTGCACAGTCAGTCTaGGCTTTAAGGAAACTCTGC +
Preference number: 5 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHTAQSV*ALRKLC
Trigger: GCAGAGTTTCCTTAAAGCCAAGACTGACTGTGCAGT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGATCAATATGCAAGACATaGCAAGATGGGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGSICKT*QDGRWG
Trigger: CCCCCACCTCCCATCTTGCAATGTCTTGCATATTGA...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GGGCTGATGCTAAGGATGGCAGTCCTGCCTAGTAAGTCAGTTGTTGACACCTTAACCACGAACATGACATaGAGAAGGTATATCTCAATA +
Preference number: 5 (lower is better)
Translates to: GLMLRMAVLPSKSVVDTLTTNMT*RRYISI
Trigger: TATTGAGATATACCTTCTCAATGTCATGTTCGTGGT...TAAGGTGTCAACAACTGACTTACTAGGCAGGACTGCCATCCTTAGCATCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGTCTATCTCACATTCTTaGGCCATCACCCAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVSISHS*AITQRK
Trigger: TTTTCTCTGGGTGATGGCCAAAGAATGTGAGATAGA...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAATCTATCTCACATTCTTaGGCCATCACCCAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: ESDRMASLRTTNGILRNESISHS*AITQRK
Trigger: TTTTCTCTGGGTGATGGCCAAAGAATGTGAGATAGA...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATAAACTTATTCTGAGTTaGGAAGCAAAAGTGACCCCC +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHKLILS*EAKVTP
Trigger: GGGGGTCACTTTTGCTTCCAAACTCAGAATAAGTTT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGAGCAGCACTTGGATTaGTCTCGGCACAGCACTTTG +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSEQHLD*SRHSTL
Trigger: CAAAGTGCTGTGCCGAGACAAATCCAAGTGCTGCTC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGACTCATAATGCGGCAGTaGTTGCTACCACTGCTGACT +
Preference number: 5 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGLIMRQ*LLPLLT
Trigger: AGTCAGCAGTGGTAGCAACAACTGCCGCATTATGAG...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATATGGGTTCTGTTATGTaGCTCCTCAGCAACATAAAC +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHMGSVM*LLSNIN
Trigger: GTTTATGTTGCTGAGGAGCAACATAACAGAACCCAT...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTCACTCAGCTTTCTGGTaGCTTCCATGCAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPHSAFW*LPCSSQ
Trigger: CTGGGAGCTGCATGGAAGCAACCAGAAAGCTGAGTG...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGCTTCAAGCCTAGGTTaGAATCTCAGCTCTACCACT +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSASSLG*NLSSTT
Trigger: AGTGGTAGAGCTGAGATTCAAACCTAGGCTTGAAGC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS TCA 90 bp TTACTAATCACTTCTGTGCTCCCACTCAGAATAACATGCTTGCCCTaGGTTTCCTTTATCCCACCTATCATGCAACTTGGTGGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: LLITSVLPLRITCLP*VSFIPPIMQLGGSF
Trigger: AAAGCTTCCACCAAGTTGCATGATAGGTGGGATAAAGGAAACTCAGGGCAAGCATGTTATTCTGAGTGGGAGCACAGAAGTGATTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS TCA 90 bp TTGGAGGAAATGTTTGTAGCTGTGGGTGATGTAGGTGCTGATTTGTaGCAGTTTTTCCTTGGAGGAACATTTGGTCCAGTTCCACTAGTA +
Preference number: 5 (lower is better)
Translates to: LEEMFVAVGDVGADL*QFFLGGTFGPVPLV
Trigger: TACTAGTGGAACTGGACCAAATGTTCCTCCAAGGAAAAACTGTCACAAATCAGCACCTACATCACCCACAGCTACAAACATTTCCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS TCA 90 bp AAAAGGTCTTCGCATTTAACAGCCAGTTTCTTCAAGGCATCTGTATaGAGGCTTCGGATTTTACCCACTACTTCCTCCCGATTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: KRSSHLTASFFKASV*RLRILPTTSSRFSS
Trigger: ACTTGAGAATCGGGAGGAAGTAGTGGGTAAAATCCGAAGCCTTCATACAGATGCCTTGAAGAAACTGGCTGTTAAATGCGAAGACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 90 bp TTGTCGTGGACTGGTGCTAGAAGTCCATACTTCTTGGTATCGAATTaGACTGGATTTTTGGAAATGGGCACTTATTTGTCCTGGTGTCAA +
Preference number: 5 (lower is better)
Translates to: LSWTGARSPYFLVSN*TGFLEMGTYLSWCQ
Trigger: TTGACACCAGGACAAATAAGTGCCCATTTCCAAAAATCCAGTGCAATTCGATACCAAGAAGTATGGACTTCTAGCACCAGTCCACGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 90 bp CTGTCTCAGAACGTGATTCTTCTGTTAAAGAAGAATCTGGTGATGTaGAGTCAGATGACACCATGCTCTGAATGCTTCCTTGTCCATAAG +
Preference number: 5 (lower is better)
Translates to: LSQNVILLLKKNLVM*SQMTPCSECFLVHK
Trigger: CTTATGGACAAGGAAGCATTCAGAGCATGGTGTCATCTGACTCCACATCACCAGATTCTTCTTTAACAGAAGAATCACGTTCTGAGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGCATTAGTTTTCACATaGCCATGGGTGATGGGTGCC +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSALVFT*PWVMGA
Trigger: GGCACCCATCACCCATGGCAATGTGAAAACTAATGC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TCCTATTTCACCCACATGCTAAATAACTATAAATTGCTTGCTTACCACCCTCCAGCATTAGTTTTCACATaGCCATGGGTGATGGGTGCC +
Preference number: 5 (lower is better)
Translates to: SYFTHMLNNYKLLAYHPPALVFT*PWVMGA
Trigger: GGCACCCATCACCCATGGCAATGTGAAAACTAATGC...TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAGCATGTGGGTGAAATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGACACCTATCATGCAACTaGGTGGAAGCTTTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRHLSCN*VEAFFP
Trigger: TGGAAAGAAAGCTTCCACCAAGTTGCATGATAGGTG...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCTTCTTCCTTCTCAGTTaGTACAGCAATCTTGCCATC +
Preference number: 5 (lower is better)
Translates to: AKVPLHSPECSRLLKPKIFFLLS*YSNLAI
Trigger: GATGGCAAGATTGCTGTACAAACTGAGAAGGAAGAA...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGAGTTTATGGTTACTGCTaGCCCAGCAACATCTGTAGA +
Preference number: 5 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRVYGYC*PSNICR
Trigger: TCTACAGATGTTGCTGGGCAAGCAGTAACCATAAAC...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGTTTATGGTTACTGCTaGCCCAGCAACATCTGTAGA +
Preference number: 5 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHVYGYC*PSNICR
Trigger: TCTACAGATGTTGCTGGGCAAGCAGTAACCATAAAC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAACTGTGGGGGTTGGATaGAAGCCACAATCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGTVGVG*KPQSEK
Trigger: TTTCTCAGATTGTGGCTTCAATCCAACCCCCACAGT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCAGCTTTAGGGCCAGATaGAGGTGTTTCTGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LAELNIILLGLSLNTQLLSFRAR*RCFWRR
Trigger: TCTCCTCCAGAAACACCTCAATCTGGCCCTAAAGCT...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAGCTTTAGGGCCAGATaGAGGTGTTTCTGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSSFRAR*RCFWRR
Trigger: TCTCCTCCAGAAACACCTCAATCTGGCCCTAAAGCT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTCTCGCTCTTTCTCTTaGTCATCCTCCTCATCTGTT +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSSRSFS*SSSSSV
Trigger: AACAGATGAGGAGGATGACAAAGAGAAAGAGCGAGA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCTAAGTTGCTGTATGTaGCACTACAAGGGTTCGGGT +
Preference number: 5 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGLSCCM*HYKGSG
Trigger: ACCCGAACCCTTGTAGTGCAACATACAGCAACTTAG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGATTTTTGGAGGTCCTaGGAGATTGGCTCTGTATTG +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSDFWRS*EIGSVL
Trigger: CAATACAGAGCCAATCTCCAAGGACCTCCAAAAATC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GAGTCAGACAGGATGGCATCACTGAGGACCACTAATGGAATTCTCAGGAATGAATCGCTTCAGGTGAAGTaGCAACATAAACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: ESDRMASLRTTNGILRNESLQVK*QHKHCN
Trigger: ATTACAGTGTTTATGTTGCAACTTCACCTGAAGCGA...TTCATTCCTGAGAATTCCATTAGTGGTCCTCAGTGATGCCATCCTGTCTGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGCTATACATTCAGTCTaGCTCTTGGCTACTTTAGCC +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSAIHSV*LLATLA
Trigger: GGCTAAAGTAGCCAAGAGCAAGACTGAATGTATAGC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATATTCATAACTCAAAATaGAGACGCTTAGTAGGACCC +
Preference number: 5 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHIHNSK*RRLVGP
Trigger: GGGTCCTACTAAGCGTCTCAATTTTGAGTTATGAAT...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCTTATGGCACCGTTTTaGGTCCATGGAATCCCCACT +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSLMAPF*VHGIPT
Trigger: AGTGGGGATTCCATGGACCAAAAACGGTGCCATAAG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCAGCATAAGTTCCAGTTaGGGCAGATACCTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSSISSS*GRYLRG
Trigger: GCCCCTCAGGTATCTGCCCAAACTGGAACTTATGCT...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACAATTCCTTCGCTATTTaGTCATGCTTCAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHNSFAI*SCFKAQ
Trigger: CTGGGCCTTGAAGCATGACAAAATAGCGAAGGAATT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS CCA 90 bp GAATCTCCTGGGTTACCAGGAGATAATCCCCCATTACAAATCTTCTaGGATAAACTACTGGCTGTCTCAGAACGTGATTCTTCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: ESPGLPGDNPPLQIF*DKLLAVSERDSSVK
Trigger: TTTAACAGAAGAATCACGTTCTGAGACAGCCAGTAGTTTATCCCAGAAGATTTGTAATGGGGGATTATCTCCTGGTAACCCAGGAGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS-3UTR CAA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTCACCTATCATGCAACTaGGTGGAAGCTTTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGHLSCN*VEAFFP
Trigger: TGGAAAGAAAGCTTCCACCAAGTTGCATGATAGGTG...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCGTGTTTGCTCTGAAGTaGGCAAAGCGAGGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSVFALK*AKRGCP
Trigger: AGGGCAACCTCGCTTTGCCAACTTCAGAGCAAACAC...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCCAACTCGGTAAGGTTTaGCTTGCTCTTCTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCQLGKV*LALLWG
Trigger: TCCCCACAGAAGAGCAAGCAAAACCTTACCGAGTTG...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGCTTCTTGGTATCGAATaGCACTGGATTTTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVLLGIE*HWIFGN
Trigger: ATTTCCAAAAATCCAGTGCAATTCGATACCAAGAAG...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGCTCAAGCATGGAGCTCTTAGGGGTTGAGGACTTTACAACCCTGATTTACCATCTTCTTGGTATCGAATaGCACTGGATTTTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: CSSMELLGVEDFTTLIYHLLGIE*HWIFGN
Trigger: ATTTCCAAAAATCCAGTGCAATTCGATACCAAGAAG...ATGGTAAATCAGGGTTGTAAAGTCCTCAACCCCTAAGAGCTCCATGCTTGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTTACTTTAGGTATCTTTaGTCGTGGACTGGTGCTAGA +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSYFRYL*SWTGAR
Trigger: TCTAGCACCAGTCCACGACAAAAGATACCTAAAGTA...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAGACAGTCAGTGGTTTaGCTAGTGGTGTTATCAGGC +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSRQSVV*LVVLSG
Trigger: GCCTGATAACACCACTAGCAAAACCACTGACTGTCT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCACTGTGGGGGTTGGATaGAAGCCACAATCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: LAELNIILLGLSLNTQLLTVGVG*KPQSEK
Trigger: TTTCTCAGATTGTGGCTTCAATCCAACCCCCACAGT...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCGATGTAAAGAGAGATTaGGGCCGGACTGGCGTACTC +
Preference number: 5 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSDVKRD*GRTGVL
Trigger: GAGTACGCCAGTCCGGCCCAAATCTCTCTTTACATC...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCGTTGGCTTGGTCCAGTaGGTGAAATGCCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSVGLVQ*VKCLCK
Trigger: TTTGCAGAGGCATTTCACCAACTGGACCAAGCCAAC...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACGAGATTGGCTCTGTATaGGCTCTTATGATCATCTTC +
Preference number: 5 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHEIGSV*ALMIIF
Trigger: GAAGATGATCATAAGAGCCAATACAGAGCCAATCTC...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TACAAAAATTGCACACATATCCATAGAAGGGGAGCACAGGCTGCACACATGGTGAGGGATTCCATGCTGTaGGAAAATCTATCCTTAATA +
Preference number: 5 (lower is better)
Translates to: YKNCTHIHRRGAQAAHMVRDSML*ENLSLI
Trigger: TATTAAGGATAGATTTTCCAACAGCATGGAATCCCT...CACCATGTGTGCAGCCTGTGCTCCCCTTCTATGGATATGTGTGCAATTTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCACTGCACAGTCAGTCTaGGCTTTAAGGAAACTCTGC +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSTAQSV*ALRKLC
Trigger: GCAGAGTTTCCTTAAAGCCAAGACTGACTGTGCAGT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTAAAAACATGCCAGGGTaGGCCCAGCAAGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPKNMPG*AQQVQF
Trigger: AAACTGGACTTGCTGGGCCAACCCTGGCATGTTTTT...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGCTAATAACTTGGTTTaGTGGGCAGCCATCCTGTTC +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSANNLV*WAAILF
Trigger: GAACAGGATGGCTGCCCACAAAACCAAGTTATTAGC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTCATAAAGCTAATAACTaGGTTTTGTGGGCAGCCATC +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSHKANN*VLWAAI
Trigger: GATGGCTGCCCACAAAACCAAGTTATTAGCTTTATG...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp ATCCCAACCCAGTGTGTTCATACATCACACTCTTTAGTTCTAACTGGTAAAGGAATCTTGCTTCTGTATTaGCCTCATGCCAAAATGCCC +
Preference number: 5 (lower is better)
Translates to: IPTQCVHTSHSLVLTGKGILLLY*PHAKMP
Trigger: GGGCATTTTGGCATGAGGCAAATACAGAAGCAAGAT...TCCTTTACCAGTTAGAACTAAAGAGTGTGATGTATGAACACACTGGGTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGATCCTGGGCATTATGTTGTaGCTTCCTTTTCTTTCCTTA +
Preference number: 5 (lower is better)
Translates to: AKVPLHSPECSRLLKPKILGIML*LPFLSL
Trigger: TAAGGAAAGAAAAGGAAGCAACAACATAATGCCCAG...GATCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp ATGCTAAAGTTCCTCTGCATTCACCAGAATGCAGTAGGCTACTTAAGCCAAAGAATGAGAGATCGAGGTTaGAATTCCAGCTCTGAAAAG +
Preference number: 5 (lower is better)
Translates to: MLKFLCIHQNAVGYLSQRMRDRG*NSSSEK
Trigger: CTTTTCAGAGCTGGAATTCAAACCTCGATCTCTCAT...TCTTTGGCTTAAGTAGCCTACTGCATTCTGGTGAATGCAGAGGAACTTTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp CCTCAACCCATACCTCACCCAGTTCATCTTCTGAGGGCAAATCTTGAAACTCATTTAGGATCTACATGTTaGCCTTTTCATCTATTCTCC +
Preference number: 5 (lower is better)
Translates to: PQPIPHPVHLLRANLETHLGSTC*PFHLFS
Trigger: GGAGAATAGATGAAAAGGCAAACATGTAGATCCTAA...ATGAGTTTCAAGATTTGCCCTCAGAAGATGAACTGGGTGAGGTATGGGTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS TCA 90 bp TGGCTAATTCCTTCATCATCTTCATTATTATTGTTAAGTGGTTTCTaGCTCAAGGCAGCTCTGTTTCGGTTCCACCCTATGATGACAGGT +
Preference number: 5 (lower is better)
Translates to: WLIPSSSSLLLLSGF*LKAALFRFHPMMTG
Trigger: ACCTGTCATCATAGGGTGGAACCGAAACAGAGCTGCCTTGAGTCAGAAACCACTTAACAATAATAATGAAGATGATGAAGGAATTAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 90 bp TACCAGGAGATAATCCCCCATTACAAATCTTCTGGGATAAACTACTaGCTGTCTCAGAACGTGATTCTTCTGTTAAAGAAGAATCTGGTG +
Preference number: 5 (lower is better)
Translates to: YQEIIPHYKSSGINY*LSQNVILLLKKNLV
Trigger: CACCAGATTCTTCTTTAACAGAAGAATCACGTTCTGAGACAGCCAGTAGTTTATCCCAGAAGATTTGTAATGGGGGATTATCTCCTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS-3UTR CAA 90 bp TCCTATTTCACCCACATGCTAAATAACTATAAATTGCTTGCTTACCACCCTCCATGTGACAGTTTTTCCTaGGAGGAACATTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: SYFTHMLNNYKLLAYHPPCDSFS*EEHLVQ
Trigger: CTGGACCAAATGTTCCTCCAAGGAAAAACTGTCACA...TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAGCATGTGGGTGAAATAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCAGACAGTCAGTGGTTTaGCTAGTGGTGTTATCAGGC +
Preference number: 5 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCRQSVV*LVVLSG
Trigger: GCCTGATAACACCACTAGCAAAACCACTGACTGTCT...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTGAGATTGGCTCTGTATaGGCTCTTATGATCATCTTC +
Preference number: 5 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGEIGSV*ALMIIF
Trigger: GAAGATGATCATAAGAGCCAATACAGAGCCAATCTC...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp AGCTATATGCGTATGTCTTGTATATATTTGCTCAAGCATGGAGCTCTTAGGGGTGAATTCACAGTATCTTaGTTCAGCAAAAATCCCCCG +
Preference number: 5 (lower is better)
Translates to: SYMRMSCIYLLKHGALRGEFTVS*FSKNPP
Trigger: CGGGGGATTTTTGCTGAACAAAGATACTGTGAATTC...ACCCCTAAGAGCTCCATGCTTGAGCAAATATATACAAGACATACGCATATAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS TCA 90 bp TTTCCTCATCTGAGAATCTTTTTAGGAATCTGTGATGGAGAAGAATaGCTCCTCTTCTTCTCTGAGTCCTGTAGTAATGCATTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: FPHLRIFLGICDGEE*LLFFSESCSNAFSA
Trigger: AGCAGAGAATGCATTACTACAGGACTCAGAGAAGAAGAGGAGTCATTCTTCTCCATCACAGATTCCTAAAAAGATTCTCAGATGAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559791.1
CDS GCA 90 bp ACTCCAGCCTGGTTTAATTGGCTCCAACTCTGGGCATTATGTTGTTaGTTCCTTTTCTTTCCTTACAAATGGATCTCAAGTATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: TPAWFNWLQLWALCC*FLFFPYKWISSILF
Trigger: GAAAAGAATACTTGAGATCCATTTGTAAGGAAAGAAAAGGAAGCAACAACATAATGCCCAGAGTTGGAGCCAATTAAACCAGGCTGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569819.5
ENST00000682557.1
CDS CCA 90 bp TTAGGTATCTTTTGTCGTGGACTGGTGCTAGAAGTCCATACTTCTTaGTATCGAATTGCACTGGATTTTTGGAAATGGGCACTTATTTGT +
Preference number: 5 (lower is better)
Translates to: LGIFCRGLVLEVHTS*YRIALDFWKWALIC
Trigger: ACAAATAAGTGCCCATTTCCAAAAATCCAGTGCAATTCGATACCAAGAAGTATGGACTTCTAGCACCAGTCCACGACAAAAGATACCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS-3UTR CAA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATGCTCTGAATGCTTCCTaGTCCATAAGAGACCACAGA +
Preference number: 5 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYALNAS*SIRDHR
Trigger: TCTGTGGTCTCTTATGGACAAGGAAGCATTCAGAGC...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACACTTTTATTGAGCTTTaGGAAGCCTGTGATGAATCT +
Preference number: 5 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHTFIEL*EACDES
Trigger: AGATTCATCACAGGCTTCCAAAAGCTCAATAAAAGT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATAGAGCAAGGACTGCTTaGTGGGTCTCTGGAACTTTT +
Preference number: 5 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYRARTA*WVSGTF
Trigger: AAAAGTTCCAGAGACCCACAAAGCAGTCCTTGCTCT...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TTGCTTCCAAGACTAGGTTACCACTCTAACAAGGCACTCTGCTATACATTCAGTGTTTGTACAGCAATCTaGCCATCTTTCTCTTCTAAT +
Preference number: 5 (lower is better)
Translates to: LLPRLGYHSNKALCYTFSVCTAI*PSFSSN
Trigger: ATTAGAAGAGAAAGATGGCAAGATTGCTGTACAAAC...ACTGAATGTATAGCAGAGTGCCTTGTTAGAGTGGTAACCTAGTCTTGGAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACAATTGCACTGGATTTTaGGAAATGGGCACTTATTTG +
Preference number: 5 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHNCTGF*EMGTYL
Trigger: CAAATAAGTGCCCATTTCCAAAAATCCAGTGCAATT...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TGTCTGGTTCAACATTCAAGTTATCATGAGTGCGGACACACACATACTATCCACCACATACTCACAGTTTaGAATAAAACAAGCACAGGT +
Preference number: 5 (lower is better)
Translates to: CLVQHSSYHECGHTHTIHHILTV*NKTSTG
Trigger: ACCTGTGCTTGTTTTATTCAAAACTGTGAGTATGTG...GTGGATAGTATGTGTGTGTCCGCACTCATGATAACTTGAATGTTGAACCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGTTATTCTTCATGAATaGGCTTCTAGGCAACCCAGT +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSVILHE*ASRQPS
Trigger: ACTGGGTTGCCTAGAAGCCAATTCATGAAGAATAAC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTTGGTGATTCTTACGTaGTTGTTCCACAGGTTACAG +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSLVILT*LFHRLQ
Trigger: CTGTAACCTGTGGAACAACAACGTAAGAATCACCAA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCATAAAGCTAATAACTaGGTTTTGTGGGCAGCCATC +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSHKANN*VLWAAI
Trigger: GATGGCTGCCCACAAAACCAAGTTATTAGCTTTATG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS TCA 90 bp CTTACAGATCTTGACTGCATAGTTATTAAGTGGATCTTTTGCATATaGAGCAGTATAGTAAACCGCATCACCTGCCTCACAACATGGTTT +
Preference number: 5 (lower is better)
Translates to: LTDLDCIVIKWIFCI*SSIVNRITCLTTWF
Trigger: AAACCATGTTGTGAGGCAGGTGATGCGGTTTACTATACTGCTTCATATGCAAAAGATCCACTTAATAACTATGCAGTCAAGATCTGTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 90 bp AGACTCGTCTGGTTTAATTGGCTCCAACTCTGGGCATTATGTTGTTaGTTCCTTTTCTTTCCTTACAAATGGATCTCAAGTATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: RLVWFNWLQLWALCC*FLFFPYKWISSILF
Trigger: GAAAAGAATACTTGAGATCCATTTGTAAGGAAAGAAAAGGAAGCAACAACATAATGCCCAGAGTTGGAGCCAATTAAACCAGACGAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567337.5
ENST00000567808.5
ENST00000569159.1
CDS-3UTR CAA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATCTCACCACATATACTTaGCCCATCTGCCACTATCAT +
Preference number: 5 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYLTTYT*PICHYH
Trigger: ATGATAGTGGCAGATGGGCAAAGTATATGTGGTGAG...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCAGAAGTCCATACTTCTaGGTATCGAATTGCACTGGA +
Preference number: 5 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCRSPYF*VSNCTG
Trigger: TCCAGTGCAATTCGATACCAAGAAGTATGGACTTCT...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAATACTTTAGGTATCTTTaGTCGTGGACTGGTGCTAGA +
Preference number: 5 (lower is better)
Translates to: ICLAELNIILLGLSLNTQYFRYL*SWTGAR
Trigger: TCTAGCACCAGTCCACGACAAAAGATACCTAAAGTA...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTTACTTTAGGTATCTTTaGTCGTGGACTGGTGCTAGA +
Preference number: 5 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPYFRYL*SWTGAR
Trigger: TCTAGCACCAGTCCACGACAAAAGATACCTAAAGTA...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTCTCGCTCTTTCTCTTaGTCATCCTCCTCATCTGTT +
Preference number: 5 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYSRSFS*SSSSSV
Trigger: AACAGATGAGGAGGATGACAAAGAGAAAGAGCGAGA...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCTCGCTTCAGGTGAAGTaGCAACATAAACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSSLQVK*QHKHCN
Trigger: ATTACAGTGTTTATGTTGCAACTTCACCTGAAGCGA...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTGAAACATCCACTGAATaGCTTCCAAGACTAGGTTAC +
Preference number: 5 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPETSTE*LPRLGY
Trigger: GTAACCTAGTCTTGGAAGCAATTCAGTGGATGTTTC...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCCGGAATTTTCAATCCTaGTCAACTAGTGAGGAGAAT +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSRNFQS*STSEEN
Trigger: ATTCTCCTCACTAGTTGACAAGGATTGAAAATTCCG...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTTCAATTGCACCAACATaGACTGAACTGTATACCCTG +
Preference number: 5 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPSIAPT*TELYTL
Trigger: CAGGGTATACAGTTCAGTCAATGTTGGTGCAATTGA...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CAAAATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCTCTCTGGAACTTTTATaGAGCTTTTGGAAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: QNYKEDTCFRMRDRGLNSSLELL*SFWKPV
Trigger: CACAGGCTTCCAAAAGCTCAATAAAAGTTCCAGAGA...GGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCAATTGCACTGGATTTTaGGAAATGGGCACTTATTTG +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSNCTGF*EMGTYL
Trigger: CAAATAAGTGCCCATTTCCAAAAATCCAGTGCAATT...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312493.5
ENST00000560626.6
CDS-3UTR CAA 90 bp AATTATAAGGAGGATACATGCTTTAGAATGAGAGATCGAGGTTTGAATTCCAGCTTAACAGGGATGGTTTaGGAGGAAATGTTTGTAGCT +
Preference number: 5 (lower is better)
Translates to: NYKEDTCFRMRDRGLNSSLTGMV*EEMFVA
Trigger: AGCTACAAACATTTCCTCCAAAACCATCCCTGTTAA...GCTGGAATTCAAACCTCGATCTCTCATTCTAAAGCATGTATCCTCCTTATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATACTCTGGGCATTATGTaGTTGCTTCCTTTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYTLGIM*LLPFLS
Trigger: GGAAAGAAAAGGAAGCAACAACATAATGCCCAGAGT...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp CTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAACTTCTCCTAAATAACTATAAATaGCTTGCTTACCACCCTCCA +
Preference number: 5 (lower is better)
Translates to: LAELNIILLGLSLNTQLLLNNYK*LAYHPP
Trigger: TGGAGGGTGGTAAGCAAGCAATTTATAGTTATTTAG...GAGAAGTTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp TTAGTTCTAACTGGTAAAGGAAGGGATAACCAAGTAGTATTTGGAGCAAGTTCCGAGATAAAACATGCATaGACTTGGCATTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: LVLTGKGRDNQVVFGASSEIKHA*TWHSSS
Trigger: ACTAGAAGAATGCCAAGTCAATGCATGTTTTATCTC...GGAACTTGCTCCAAATACTACTTGGTTATCCCTTCCTTTACCAGTTAGAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS TCA 90 bp CTTTATCCCACCTATCATGCAACTTGGTGGAAGCTTTCTTTCCAATaGTCGTTTATAGCAATCATTTATTCTTCCCAAGAATGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LYPTYHATWWKLSFQ*SFIAIIYSSQECFS
Trigger: AGAGAAACATTCTTGGGAAGAATAAATGATTGCTATAAACGATCATTGGAAAGAAAGCTTCCACCAAGTTGCATGATAGGTGGGATAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS-3UTR CAA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAAAAATTTCAAGGTGCTTaGGGTCTTTCCAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: ICLAELNIILLGLSLNTQKFQGA*GLSKMN
Trigger: ATTCATCTTGGAAAGACCCAAAGCACCTTGAAATTT...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAAACTTTTATTGAGCTTTaGGAAGCCTGTGATGAATCT +
Preference number: 5 (lower is better)
Translates to: ICLAELNIILLGLSLNTQTFIEL*EACDES
Trigger: AGATTCATCACAGGCTTCCAAAAGCTCAATAAAAGT...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp ATCTGTCTAGCTGAACTGAATATTATACTACTGGGTCTCAGTCTCAATACTCAAGTTTGTACAGCAATCTaGCCATCTTTCTCTTCTAAT +
Preference number: 5 (lower is better)
Translates to: ICLAELNIILLGLSLNTQVCTAI*PSFSSN
Trigger: ATTAGAAGAGAAAGATGGCAAGATTGCTGTACAAAC...TTGAGTATTGAGACTGAGACCCAGTAGTATAATATTCAGTTCAGCTAGACAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp CGAAGTTATTGCCAGATCAACTCAAAATTACGGTTTCCCACATCTTATATACCTGTTTGTACAGCAATCTaGCCATCTTTCTCTTCTAAT +
Preference number: 5 (lower is better)
Translates to: RSYCQINSKLRFPTSYIPVCTAI*PSFSSN
Trigger: ATTAGAAGAGAAAGATGGCAAGATTGCTGTACAAAC...AGGTATATAAGATGTGGGAAACCGTAATTTTGAGTTGATCTGGCAATAACTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560626.6
CDS-3UTR CAA 90 bp CCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATTGCCTTCTTGGTATCGAATaGCACTGGATTTTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: PVSSSHYHHIPKQHIIYCLLGIE*HWIFGN
Trigger: ATTTCCAAAAATCCAGTGCAATTCGATACCAAGAAG...GCAATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS GCA 90 bp AATGTTTACTGGTTTAATTGGCTCCAACTCTGGGCATTATGTTGTTaGTTCCTTTTCTTTCCTTACAAATGGATCTCAAGTATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: NVYWFNWLQLWALCC*FLFFPYKWISSILF
Trigger: GAAAAGAATACTTGAGATCCATTTGTAAGGAAAGAAAAGGAAGCAACAACATAATGCCCAGAGTTGGAGCCAATTAAACCAGTAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS-3UTR CAA 90 bp GATCCTGTTTCTTCCTCACACTACCATCACATTCCAAAACAACACATTATTTATAATTGCACTGGATTTTaGGAAATGGGCACTTATTTG +
Preference number: 5 (lower is better)
Translates to: DPVSSSHYHHIPKQHIIYNCTGF*EMGTYL
Trigger: CAAATAAGTGCCCATTTCCAAAAATCCAGTGCAATT...ATAAATAATGTGTTGTTTTGGAATGTGATGGTAGTGTGAGGAAGAAACAGGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS TCA 72 bp CCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCCCCTTaGGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCG +
Preference number: 6 (lower is better)
Translates to: PEVEPTEAGRPP*AVVGSTQFELP
Trigger: CGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGGGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 72 bp AGTGCCTCGCCCTGCTTCAGCTCGCGCACGGTGTGCTaGACCCACTGTCCTGCACCCACTGTCTGGCACTCC +
Preference number: 6 (lower is better)
Translates to: SASPCFSSRTVC*THCPAPTVWHS
Trigger: GGAGTGCCAGACAGTGGGTGCAGGACAGTGGGTGCAGCACACCGTGCGCGAGCTGAAGCAGGGCGAGGCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 72 bp GGTAGTGCCTCGCCCTGCTTCAGCTCGCGCACGGTGTaGTGCACCCACTGTCCTGCACCCACTGTCTGGCAC +
Preference number: 6 (lower is better)
Translates to: GSASPCFSSRTV*CTHCPAPTVWH
Trigger: GTGCCAGACAGTGGGTGCAGGACAGTGGGTGCAGCACACCGTGCGCGAGCTGAAGCAGGGCGAGGCACTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 72 bp CCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCCCCTaGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCC +
Preference number: 6 (lower is better)
Translates to: PRGGAYRGRQAP*SCGGLHPVRAS
Trigger: GGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGGGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 72 bp CTTGTCTCTGCGGCTTCTGGATGCCTCGGCCCTGTCTaGAAGAGGGCCCACGCCGGCTGGAGAGGGATTCCA +
Preference number: 6 (lower is better)
Translates to: LVSAASGCLGPV*KRAHAGWRGIP
Trigger: TGGAATCCCTCTCCAGCCGGCGTGGGCCCTCTTGCAGACAGGGCCGAGGCATCCAGAAGCCGCAGAGACAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp CGAGCTTCCGGGCTGCTTTGTTTACCTAATCAAGCCTaGGCAACGGCAGGCGCCCCTCCCCCAGCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: RASGLLCLPNQA*ATAGAPPPASV
Trigger: CACCGAGGCTGGGGGAGGGGCGCCTGCCGTTGCCCAGGCTTGATTAGGTAAACAAAGCAGCCCGGAAGCTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 72 bp TGCTCGGGGGTCAGGGACCCACTTGAGGAGGCAGTCTaGCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: CSGVRDPLEEAV*PFSDLQLRAGR
Trigger: TCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS TCA 72 bp CTCCCAGTTAGGCTGCTCGGGGGTCAGGGACCCACTTaGGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: LPVRLLGGQGPT*GGSLPVLRSPA
Trigger: AGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCGAGCAGCCTAACTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 72 bp CTTCAGCTCGCGCACGGTGTGCTGCACCCACTGTCCTaGACCCACTGTCTGGCACTCCCTAGTGAGATGAAC +
Preference number: 6 (lower is better)
Translates to: LQLAHGVLHPLS*THCLALPSEMN
Trigger: GTTCATCTCACTAGGGAGTGCCAGACAGTGGGTGCAGGACAGTGGGTGCAGCACACCGTGCGCGAGCTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 72 bp TCCCTCCAAAGGCGATGGCATCGTCCACAGCTCCCTTaGGCTGTCGTGGCTGCTTGGGAGGTATCATGGCTG +
Preference number: 6 (lower is better)
Translates to: SLQRRWHRPQLP*AVVAAWEVSWL
Trigger: CAGCCATGATACCTCCCAAGCAGCCACGACAGCCCAAGGGAGCTGTGGACGATGCCATCGCCTTTGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp TGGGTAGCTGTTATGATCTCTGGGGCAAGGCGAGACTaGTCCCGGAGGATCTCGGGGTCCACCAGATGGCTC +
Preference number: 6 (lower is better)
Translates to: WVAVMISGARRD*SRRISGSTRWL
Trigger: GAGCCATCTGGTGGACCCCGAGATCCTCCGGGACCAGTCTCGCCTTGCCCCAGAGATCATAACAGCTACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 72 bp TCGCGGGGGCCCCAGAGCAGACACTGGAGGATGCCTTaGGCGTCTGAAATGAGGATCCGCTCAGAAGGGTTG +
Preference number: 6 (lower is better)
Translates to: SRGPQSRHWRMP*ASEMRIRSEGL
Trigger: CAACCCTTCTGAGCGGATCCTCATTTCAGACGCCAAAGGCATCCTCCAGTGTCTGCTCTGGGGCCCCCGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 72 bp GGAGTAGGGGGAGCGGAATGGGATGCGAGGCAGGTCTaGTCGTGTGTATTCCCTCTCCTTCAGCTCTGGGTT +
Preference number: 6 (lower is better)
Translates to: GVGGAEWDARQV*SCVFPLLQLWV
Trigger: AACCCAGAGCTGAAGGAGAGGGAATACACACGAGCAGACCTGCCTCGCATCCCATTCCGCTCCCCCTACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 72 bp GCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCGGGCTaGTTTGTTTACCTAATCAAGCCTGGGCAACGGCAG +
Preference number: 6 (lower is better)
Translates to: AVVGSTQFELPG*FVYLIKPGQRQ
Trigger: CTGCCGTTGCCCAGGCTTGATTAGGTAAACAAAGCAGCCCGGAAGCTCGAACTGGGTGGAGCCCACCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 72 bp GGCGATGGCATCGTCCACAGCTCCCTTGGGCTGTCGTaGCTGCTTGGGAGGTATCATGGCTGCTCTAGATTG +
Preference number: 6 (lower is better)
Translates to: GDGIVHSSLGLS*LLGRYHGCSRL
Trigger: CAATCTAGAGCAGCCATGATACCTCCCAAGCAGCCACGACAGCCCAAGGGAGCTGTGGACGATGCCATCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp TGCCTCGGCCCTGTCTGCAAGAGGGCCCACGCCGGCTaGAGAGGGATTCCATGCTGTTGGAAAATCTATCCT +
Preference number: 6 (lower is better)
Translates to: CLGPVCKRAHAG*RGIPCCWKIYP
Trigger: AGGATAGATTTTCCAACAGCATGGAATCCCTCTCCAGCCGGCGTGGGCCCTCTTGCAGACAGGGCCGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp TGGAAGAGATCTTCGCGGGGGCCCCAGAGCAGACACTaGAGGATGCCTTTGGCGTCTGAAATGAGGATCCGC +
Preference number: 6 (lower is better)
Translates to: WKRSSRGPQSRH*RMPLASEMRIR
Trigger: GCGGATCCTCATTTCAGACGCCAAAGGCATCCTCCAGTGTCTGCTCTGGGGCCCCCGCGAAGATCTCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp TTCCTCTGTACTAGGCTAGGGCAGGCGGTGAAAGTCTaGAAGAGATCTTCGCGGGGGCCCCAGAGCAGACAC +
Preference number: 6 (lower is better)
Translates to: FLCTRLGQAVKV*KRSSRGPQSRH
Trigger: GTGTCTGCTCTGGGGCCCCCGCGAAGATCTCTTCCAGACTTTCACCGCCTGCCCTAGCCTAGTACAGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 90 bp AAGAGATCTTCGCGGGGGCCCCAGAGCAGACACTGGAGGATGCCTTaGGCGTCTGAAATGAGGATCCGCTCAGAAGGGTTGGGATTCAGG +
Preference number: 6 (lower is better)
Translates to: KRSSRGPQSRHWRMP*ASEMRIRSEGLGFR
Trigger: CCTGAATCCCAACCCTTCTGAGCGGATCCTCATTTCAGACGCCAAAGGCATCCTCCAGTGTCTGCTCTGGGGCCCCCGCGAAGATCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 72 bp GTCTGCAGAGGTTACTGCTGTCCTTTTGTTTGTCTGTaGCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: VCRGYCCPFVCL*PAPRGGAYRGR
Trigger: CCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAGGACAGCAGTAACCTCTGCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 72 bp GGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTaGTGGGAGAACCACTACTCTCCTCAAAGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: GGSLPVLRSPAA*WENHYSPQSCQ
Trigger: CTGACAGCTTTGAGGAGAGTAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 90 bp TGGTCTGTTTTCCCTCCAAAGGCGATGGCATCGTCCACAGCTCCCTaGGGCTGTCGTGGCTGCTTGGGAGGTATCATGGCTGCTCTAGAT +
Preference number: 6 (lower is better)
Translates to: WSVFPPKAMASSTAP*GCRGCLGGIMAALD
Trigger: ATCTAGAGCAGCCATGATACCTCCCAAGCAGCCACGACAGCCCAAGGGAGCTGTGGACGATGCCATCGCCTTTGGAGGGAAAACAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 90 bp CTTTGGCAGTGGGGGTGGTGTAGGTTGGGAAGCATTGGGTGCTTCTaGGTCTGTTTTCCCTCCAAAGGCGATGGCATCGTCCACAGCTCC +
Preference number: 6 (lower is better)
Translates to: LWQWGWCRLGSIGCF*VCFPSKGDGIVHSS
Trigger: GGAGCTGTGGACGATGCCATCGCCTTTGGAGGGAAAACAGACCAAGAAGCACCCAATGCTTCCCAACCTACACCACCCCCACTGCCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS TCA 72 bp AACAGGGCCCTCGAGGTGCTCACTGGCCATGGCTGCTaGCACATCCACGACAGTATATGGCTTGCACAATGG +
Preference number: 6 (lower is better)
Translates to: NRALEVLTGHGC*HIHDSIWLAQW
Trigger: CCATTGTGCAAGCCATATACTGTCGTGGATGTGTCAGCAGCCATGGCCAGTGAGCACCTCGAGGGCCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS TCA 72 bp GCCCCAGAGCAGACACTGGAGGATGCCTTTGGCGTCTaGAATGAGGATCCGCTCAGAAGGGTTGGGATTCAG +
Preference number: 6 (lower is better)
Translates to: APEQTLEDAFGV*NEDPLRRVGIQ
Trigger: CTGAATCCCAACCCTTCTGAGCGGATCCTCATTTCAGACGCCAAAGGCATCCTCCAGTGTCTGCTCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 72 bp TGGTGCTGCTGCTGCCCACCATCTGAGACTCCTGAGTaGCTTCTATTTTGGCCACAGGCTCTTGAGTGGCTC +
Preference number: 6 (lower is better)
Translates to: WCCCCPPSETPE*LLFWPQALEWL
Trigger: GAGCCACTCAAGAGCCTGTGGCCAAAATAGAAGGCACTCAGGAGTCTCAGATGGTGGGCAGCAGCAGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS GCA 72 bp TTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTaGGTGCTGGGAGAACCACTACTCTCCTCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: LRRQSARSQISS*VLGEPLLSSKL
Trigger: CAGCTTTGAGGAGAGTAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 72 bp GGCCACAGGCTCTTGAGTGGCTCTCTGGATCTTTGCTaGGGAGCTGTGGCTGGAACTATAGCTTCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: GHRLLSGSLDLC*GAVAGTIASLW
Trigger: CCACAGAGAAGCTATAGTTCCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCCACTCAAGAGCCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CCA 72 bp CCTGAGTGCCTTCTATTTTGGCCACAGGCTCTTGAGTaGCTCTCTGGATCTTTGCTGGGGAGCTGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: PECLLFWPQALE*LSGSLLGSCGW
Trigger: CCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCCACTCAAGAGCCTGTGGCCAAAATAGAAGGCACTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CCA 72 bp GGGGGTGGTGTAGGTTGGGAAGCATTGGGTGCTTCTTaGTCTGTTTTCCCTCCAAAGGCGATGGCATCGTCC +
Preference number: 6 (lower is better)
Translates to: GGGVGWEALGAS*SVFPPKAMASS
Trigger: GGACGATGCCATCGCCTTTGGAGGGAAAACAGACCAAGAAGCACCCAATGCTTCCCAACCTACACCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp GGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTaGGAGAACCACTACTCTCCTCAAAGCTGTCAGACA +
Preference number: 6 (lower is better)
Translates to: GSLPVLRSPAAC*ENHYSPQSCQT
Trigger: TGTCTGACAGCTTTGAGGAGAGTAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 72 bp GGAGCTGGTGGCTCACTTTGGGGGCTAGTCACTAATTaGGAGGGAGAGGGGGTGACTGGCTTTATGGATGGG +
Preference number: 6 (lower is better)
Translates to: GAGGSLWGLVTN*EGEGVTGFMDG
Trigger: CCCATCCATAAAGCCAGTCACCCCCTCTCCCTCCAAATTAGTGACTAGCCCCCAAAGTGAGCCACCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CAA 90 bp TGCCTGGTCTGTCCTAGCCTTGCTCTGATCCACACTGAGCTGGCCTaGAGCAGGGTCGCACCTGTACATGAAGACAATGGCTGGTTTCTC +
Preference number: 6 (lower is better)
Translates to: CLVCPSLALIHTELA*SRVAPVHEDNGWFL
Trigger: GAGAAACCAGCCATTGTCTTCATGTACAGGTGCGACCCTGCTCAAGGCCAGCTCAGTGTGGATCAGAGCAAGGCTAGGACAGACCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000559791.1
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CAA 90 bp ACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTaGCTCATGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCC +
Preference number: 6 (lower is better)
Translates to: TRYLRWKCRNHPSSA*LMLGAVDRSCSYSA
Trigger: GGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCATGAGCAACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS TCA 72 bp AGAGCAGACACTGGAGGATGCCTTTGGCGTCTGAAATaGGGATCCGCTCAGAAGGGTTGGGATTCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: RADTGGCLWRLK*GSAQKGWDSGG
Trigger: GCCTCCTGAATCCCAACCCTTCTGAGCGGATCCTCATTTCAGACGCCAAAGGCATCCTCCAGTGTCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 72 bp CACTACTTCCTCCCGATTCTCAAGTCCTCGATAAAGTaGTTGTCTCTGCGGCTTCTGGATGCCTCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: HYFLPILKSSIK*LSLRLLDASAL
Trigger: CAGGGCCGAGGCATCCAGAAGCCGCAGAGACAAGCACTTTATCGAGGACTTGAGAATCGGGAGGAAGTAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp AGCGGTGGCTGCAGAACAGCGGTGGCTGTAGAACAGTaGATTTTGGTGACCTGCAAATGCTGCTGCCTGATC +
Preference number: 6 (lower is better)
Translates to: SGGCRTAVAVEQ*ILVTCKCCCLI
Trigger: GATCAGGCAGCAGCATTTGCAGGTCACCAAAATCCACTGTTCTACAGCCACCGCTGTTCTGCAGCCACCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 72 bp TGTCCTAGCCTTGCTCTGATCCACACTGAGCTGGCCTaGAGCAGGGTCGCACCTGTACATGAAGACAATGGC +
Preference number: 6 (lower is better)
Translates to: CPSLALIHTELA*SRVAPVHEDNG
Trigger: GCCATTGTCTTCATGTACAGGTGCGACCCTGCTCAAGGCCAGCTCAGTGTGGATCAGAGCAAGGCTAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000559791.1
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CAA 72 bp TGGGGGTGGTGTAGGTTGGGAAGCATTGGGTGCTTCTaGGTCTGTTTTCCCTCCAAAGGCGATGGCATCGTC +
Preference number: 6 (lower is better)
Translates to: WGWCRLGSIGCF*VCFPSKGDGIV
Trigger: GACGATGCCATCGCCTTTGGAGGGAAAACAGACCAAGAAGCACCCAATGCTTCCCAACCTACACCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 90 bp CACCATCTGAGACTCCTGAGTGCCTTCTATTTTGGCCACAGGCTCTaGAGTGGCTCTCTGGATCTTTGCTGGGGAGCTGTGGCTGGAACT +
Preference number: 6 (lower is better)
Translates to: HHLRLLSAFYFGHRL*SGSLDLCWGAVAGT
Trigger: AGTTCCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCCACTCAAGAGCCTGTGGCCAAAATAGAAGGCACTCAGGAGTCTCAGATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CAA 90 bp TTTACCCACTACTTCCTCCCGATTCTCAAGTCCTCGATAAAGTGCTaGTCTCTGCGGCTTCTGGATGCCTCGGCCCTGTCTGCAAGAGGG +
Preference number: 6 (lower is better)
Translates to: FTHYFLPILKSSIKC*SLRLLDASALSARG
Trigger: CCCTCTTGCAGACAGGGCCGAGGCATCCAGAAGCCGCAGAGACAAGCACTTTATCGAGGACTTGAGAATCGGGAGGAAGTAGTGGGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 90 bp AGACAGGGACATTTAAGTCTGCAGAGGTTACTGCTGTCCTTTTGTTaGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: RQGHLSLQRLLLSFC*SVPCPQRWSLQRQA
Trigger: TGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAGGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS TCA 72 bp AGAGAAGTTGCTCACTATAAGCCTAGTGGGATAAGATaGGGTGGGGCTGGGCTCTGCAGGCCCAAAGCCTTG +
Preference number: 6 (lower is better)
Translates to: REVAHYKPSGIR*GGAGLCRPKAL
Trigger: CAAGGCTTTGGGCCTGCAGAGCCCAGCCCCACCTCATCTTATCCCACTAGGCTTATAGTGAGCAACTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS TCA 72 bp AGCAATGTTTACTGTAGACCCAGCTGCTTGGGAGGCTaGGGCAGGAGAATTACTCGAACCCGGAAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: SNVYCRPSCLGG*GRRITRTRKAE
Trigger: CTCTGCCTTCCGGGTTCGAGTAATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGTCTACAGTAAACATTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567808.5
CDS GCA 72 bp TTTGGCCACAGGCTCTTGAGTGGCTCTCTGGATCTTTaGTGGGGAGCTGTGGCTGGAACTATAGCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: FGHRLLSGSLDL*WGAVAGTIASL
Trigger: CAGAGAAGCTATAGTTCCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCCACTCAAGAGCCTGTGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS GCA 72 bp TCTGAGAAAGCACTGTGCTTGCTTTCTCTCTGGTGCTaGTGCTGCCCACCATCTGAGACTCCTGAGTGCCTT +
Preference number: 6 (lower is better)
Translates to: SEKALCLLSLWC*CCPPSETPECL
Trigger: AAGGCACTCAGGAGTCTCAGATGGTGGGCAGCAGCAGCACCAGAGAGAAAGCAAGCACAGTGCTTTCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS GCA 72 bp GGTCCAGTTGGTGAAATGCCTCTGCAAAAGGTTACCTaGATGGTAAGGAGAAGAAGTAGAGCGTGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: GPVGEMPLQKVT*MVRRRSRAWRG
Trigger: CCCCCGCCACGCTCTACTTCTTCTCCTTACCATGCAGGTAACCTTTTGCAGAGGCATTTCACCAACTGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS GCA 72 bp GGTTTTGCATCAGCTGCCCGCCTGCTGCCTTCAGAGTaGAAAACTGATTCAGCTTCTGTTGACCTGGTAGGG +
Preference number: 6 (lower is better)
Translates to: GFASAARLLPSE*KTDSASVDLVG
Trigger: CCCTACCAGGTCAACAGAAGCTGAATCAGTTTTGCACTCTGAAGGCAGCAGGCGGGCAGCTGATGCAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS GCA 72 bp GTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTTGCTCATGCTGGGAGCTGTAGACCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: VPQMEMQKSPVF*VAHAGSCRPEL
Trigger: CAGCTCCGGTCTACAGCTCCCAGCATGAGCAACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 72 bp TTCTTTGGCAGTGGGGGTGGTGTAGGTTGGGAAGCATaGGGTGCTTCTTGGTCTGTTTTCCCTCCAAAGGCG +
Preference number: 6 (lower is better)
Translates to: FFGSGGGVGWEA*GASWSVFPPKA
Trigger: CGCCTTTGGAGGGAAAACAGACCAAGAAGCACCCAATGCTTCCCAACCTACACCACCCCCACTGCCAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 72 bp TACTTCCTCCCGATTCTCAAGTCCTCGATAAAGTGCTaGTCTCTGCGGCTTCTGGATGCCTCGGCCCTGTCT +
Preference number: 6 (lower is better)
Translates to: YFLPILKSSIKC*SLRLLDASALS
Trigger: AGACAGGGCCGAGGCATCCAGAAGCCGCAGAGACAAGCACTTTATCGAGGACTTGAGAATCGGGAGGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 72 bp CTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTaGCTCATGCTGGGAGCTGTAGACCGGAGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: LRWKCRNHPSSA*LMLGAVDRSCS
Trigger: GGAACAGCTCCGGTCTACAGCTCCCAGCATGAGCAACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 90 bp TGTCAGACAGGGACATTTAAGTCTGCAGAGGTTACTGCTGTCCTTTaGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCA +
Preference number: 6 (lower is better)
Translates to: CQTGTFKSAEVTAVL*FVCALPPEVEPTEA
Trigger: TGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAGGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 72 bp GACCAGCTGTCCACTCCAAAACGGAGCTGGTCTTTCTaGCCAGCCATGAAAAGGTCTTCGCATTTAACAGCC +
Preference number: 6 (lower is better)
Translates to: DQLSTPKRSWSF*PAMKRSSHLTA
Trigger: GGCTGTTAAATGCGAAGACCTTTTCATGGCTGGGCAGAAAGACCAGCTCCGTTTTGGAGTGGACAGCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp CTGAAGTCTGACCAGCTGTCCACTCCAAAACGGAGCTaGTCTTTCTGCCCAGCCATGAAAAGGTCTTCGCAT +
Preference number: 6 (lower is better)
Translates to: LKSDQLSTPKRS*SFCPAMKRSSH
Trigger: ATGCGAAGACCTTTTCATGGCTGGGCAGAAAGACCAGCTCCGTTTTGGAGTGGACAGCTGGTCAGACTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp CTCTTCCATGTCATCCTCATCCTTTTCAGGGTCATCTaGATCCTCCCAGGGAAGCAGACGGTTAGGGACTTC +
Preference number: 6 (lower is better)
Translates to: LFHVILILFRVI*ILPGKQTVRDF
Trigger: GAAGTCCCTAACCGTCTGCTTCCCTGGGAGGATCCAGATGACCCTGAAAAGGATGAGGATGACATGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp CAGAGAGTCTCGCACAAAATCAGCCACAGTAAGACATaGAACCTCCCTGGTGATGACCACAACGTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: QRVSHKISHSKT*NLPGDDHNVAP
Trigger: AGGAGCCACGTTGTGGTCATCACCAGGGAGGTTCCATGTCTTACTGTGGCTGATTTTGTGCGAGACTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp ATCACACTTTTTATACTGGGTAGCTGTTATGATCTCTaGGGCAAGGCGAGACTGGTCCCGGAGGATCTCGGG +
Preference number: 6 (lower is better)
Translates to: ITLFILGSCYDL*GKARLVPEDLG
Trigger: CCCGAGATCCTCCGGGACCAGTCTCGCCTTGCCCCAGAGATCATAACAGCTACCCAGTATAAAAAGTGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 72 bp ACTGGAGAGTTTGGAGTAGAGGATGAGCTTTTTGTCTaGGGGCTGTTAACAGGGCCCTCGAGGTGCTCACTG +
Preference number: 6 (lower is better)
Translates to: TGEFGVEDELFV*GLLTGPSRCSL
Trigger: CAGTGAGCACCTCGAGGGCCCTGTTAACAGCCCCAAGACAAAAAGCTCATCCTCTACTCCAAACTCTCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 72 bp TTTTGGCCACAGGCTCTTGAGTGGCTCTCTGGATCTTaGCTGGGGAGCTGTGGCTGGAACTATAGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: FWPQALEWLSGS*LGSCGWNYSFS
Trigger: AGAGAAGCTATAGTTCCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCCACTCAAGAGCCTGTGGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CAA 72 bp TCTGTTGACCTGGTAGGGCTGGTTGGCTTGGTCCAGTaGGTGAAATGCCTCTGCAAAAGGTTACCTGCATGG +
Preference number: 6 (lower is better)
Translates to: SVDLVGLVGLVQ*VKCLCKRLPAW
Trigger: CCATGCAGGTAACCTTTTGCAGAGGCATTTCACCAACTGGACCAAGCCAACCAGCCCTACCAGGTCAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CAA 72 bp CATTTAAGTCTGCAGAGGTTACTGCTGTCCTTTTGTTaGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAG +
Preference number: 6 (lower is better)
Translates to: HLSLQRLLLSFC*SVPCPQRWSLQ
Trigger: CTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAGGACAGCAGTAACCTCTGCAGACTTAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 90 bp GATGATGTAACTGGAGAGTTTGGAGTAGAGGATGAGCTTTTTGTCTaGGGGCTGTTAACAGGGCCCTCGAGGTGCTCACTGGCCATGGCT +
Preference number: 6 (lower is better)
Translates to: DDVTGEFGVEDELFV*GLLTGPSRCSLAMA
Trigger: AGCCATGGCCAGTGAGCACCTCGAGGGCCCTGTTAACAGCCCCAAGACAAAAAGCTCATCCTCTACTCCAAACTCTCCAGTTACATCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 90 bp TGCCTTCTATTTTGGCCACAGGCTCTTGAGTGGCTCTCTGGATCTTaGCTGGGGAGCTGTGGCTGGAACTATAGCTTCTCTGTGGTGAAG +
Preference number: 6 (lower is better)
Translates to: CLLFWPQALEWLSGS*LGSCGWNYSFSVVK
Trigger: CTTCACCACAGAGAAGCTATAGTTCCAGCCACAGCTCCCCAGCAAAGATCCAGAGAGCCACTCAAGAGCCTGTGGCCAAAATAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CAA 90 bp ATGATCATCTTCTTTGGCAGTGGGGGTGGTGTAGGTTGGGAAGCATaGGGTGCTTCTTGGTCTGTTTTCCCTCCAAAGGCGATGGCATCG +
Preference number: 6 (lower is better)
Translates to: MIIFFGSGGGVGWEA*GASWSVFPPKAMAS
Trigger: CGATGCCATCGCCTTTGGAGGGAAAACAGACCAAGAAGCACCCAATGCTTCCCAACCTACACCACCCCCACTGCCAAAGAAGATGATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 90 bp TTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAGTTaGCTAGAGGTCCACTCTAGACCCTTTTTGCCTGGGTGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: FPSNRQDPQLQVCWS*LEVHSRPFLPGCQQ
Trigger: CTGCTGACACCCAGGCAAAAAGGGTCTAGAGTGGACCTCTAGCAAACTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS TCA 72 bp TGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGTaGGACTCCGTGAGCATAGGACCCTCTGAGCCAGTT +
Preference number: 6 (lower is better)
Translates to: CSLISDCCASNQ*DSVSIGPSEPV
Trigger: AACTGGCTCAGAGGGTCCTATGCTCACGGAGTCTCACTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 72 bp ATTGGCATTAGTTTTCACATTGCCATGGGTGATGGGTaGCTTCTCAGGGTCTGGGGGAAGCTGGTGCAAACT +
Preference number: 6 (lower is better)
Translates to: IGISFHIAMGDG*LLRVWGKLVQT
Trigger: AGTTTGCACCAGCTTCCCCCAGACCCTGAGAAGGCACCCATCACCCATGGCAATGTGAAAACTAATGCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000565820.5
ENST00000682557.1
CDS GCA 72 bp GACAATGTGTTTGCTCTGAAGTTGGCAAAGCGAGGTTaGCCTCTCATGCGAATCTCCATGGCCAACAGCTCT +
Preference number: 6 (lower is better)
Translates to: DNVFALKLAKRG*PLMRISMANSS
Trigger: AGAGCTGTTGGCCATGGAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAACTTCAGAGCAAACACATTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 72 bp CCATGGCTGCTGACACATCCACGACAGTATATGGCTTaGACAATGGCTGTTCCAGGTTCACAACTCGGTAAG +
Preference number: 6 (lower is better)
Translates to: PWLLTHPRQYMA*TMAVPGSQLGK
Trigger: CTTACCGAGTTGTGAACCTGGAACAGCCATTGTGCAAGCCATATACTGTCGTGGATGTGTCAGCAGCCATGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 72 bp AATGCTGTTGTGACTGAAGTGCAGCCCCTGCCATCTTaGTTCCCAACAACAGTTCTTGGATCCCGAGGAGAA +
Preference number: 6 (lower is better)
Translates to: NAVVTEVQPLPS*FPTTVLGSRGE
Trigger: TTCTCCTCGGGATCCAAGAACTGTTGTTGGGAAGCAAGATGGCAGGGGCTGCACTTCAGTCACAACAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS GCA 72 bp ACAGCGGTGGCTGTAGAACAGTGGATTTTGGTGACCTaGAAATGCTGCTGCCTGATCGTTCCTCTGGAAGTT +
Preference number: 6 (lower is better)
Translates to: TAVAVEQWILVT*KCCCLIVPLEV
Trigger: AACTTCCAGAGGAACGATCAGGCAGCAGCATTTGCAGGTCACCAAAATCCACTGTTCTACAGCCACCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 72 bp ACCTGCCTCTCATACAAATCAGGGCTTTTCCCATGCTaGGCCAGAGAGTCTCGCACAAAATCAGCCACAGTA +
Preference number: 6 (lower is better)
Translates to: TCLSYKSGLFPC*ARESRTKSATV
Trigger: TACTGTGGCTGATTTTGTGCGAGACTCTCTGGCCCAGCATGGGAAAAGCCCTGATTTGTATGAGAGGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp ATCATGAGCAGTGTTCGCTTGATGTCTAGCCAGTTTTaGAGCAGGGTGTTCCTCTGTACTAGGCTAGGGCAG +
Preference number: 6 (lower is better)
Translates to: IMSSVRLMSSQF*SRVFLCTRLGQ
Trigger: CTGCCCTAGCCTAGTACAGAGGAACACCCTGCTCCAAAACTGGCTAGACATCAAGCGAACACTGCTCATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 72 bp AGACAATGTGTTTGCTCTGAAGTTGGCAAAGCGAGGTaGCCCTCTCATGCGAATCTCCATGGCCAACAGCTC +
Preference number: 6 (lower is better)
Translates to: RQCVCSEVGKAR*PSHANLHGQQL
Trigger: GAGCTGTTGGCCATGGAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAACTTCAGAGCAAACACATTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 72 bp TGCAAATGCTGCTGCCTGATCGTTCCTCTGGAAGTTTaGTCTCAGAGGAGTACTCGGCCATGTGAGGTGTCA +
Preference number: 6 (lower is better)
Translates to: CKCCCLIVPLEV*SQRSTRPCEVS
Trigger: TGACACCTCACATGGCCGAGTACTCCTCTGAGACAAAACTTCCAGAGGAACGATCAGGCAGCAGCATTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 72 bp ACTCGTCAAAGTCATTCTCCATCCAGCTTTGTTCCGTaGCTGGTGAGGCACTGTGTTCCTTTGGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: TRQSHSPSSFVP*LVRHCVPLEEE
Trigger: CTCCTCCTCCAAAGGAACACAGTGCCTCACCAGCAACGGAACAAAGCTGGATGGAGAATGACTTTGACGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 90 bp TCGAACAGGAGACAATGTGTTTGCTCTGAAGTTGGCAAAGCGAGGTaGCCCTCTCATGCGAATCTCCATGGCCAACAGCTCTTCATCACT +
Preference number: 6 (lower is better)
Translates to: SNRRQCVCSEVGKAR*PSHANLHGQQLFIT
Trigger: AGTGATGAAGAGCTGTTGGCCATGGAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAACTTCAGAGCAAACACATTGTCTCCTGTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 90 bp CTTGCACAATGGCTGTTCCAGGTTCACAACTCGGTAAGGTTTTGCTaGCTCTTCTGTGGGGACAAGGTTTATGGTTACTGCTTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: LAQWLFQVHNSVRFC*LFCGDKVYGYCLPS
Trigger: GCTGGGCAAGCAGTAACCATAAACCTTGTCCCCACAGAAGAGCAAGCAAAACCTTACCGAGTTGTGAACCTGGAACAGCCATTGTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 90 bp TGTCTGCAAGAGGGCCCACGCCGGCTGGAGAGGGATTCCATGCTGTaGGAAAATCTATCCTTAATACTGAGAGTGGTTAAGCTGGAAATG +
Preference number: 6 (lower is better)
Translates to: CLQEGPRRLERDSML*ENLSLILRVVKLEM
Trigger: CATTTCCAGCTTAACCACTCTCAGTATTAAGGATAGATTTTCCAACAGCATGGAATCCCTCTCCAGCCGGCGTGGGCCCTCTTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 90 bp CTGTCCAGGGACTTCTCAGCAAACTTGATCATGAGCAGTGTTCGCTaGATGTCTAGCCAGTTTTGGAGCAGGGTGTTCCTCTGTACTAGG +
Preference number: 6 (lower is better)
Translates to: LSRDFSANLIMSSVR*MSSQFWSRVFLCTR
Trigger: CCTAGTACAGAGGAACACCCTGCTCCAAAACTGGCTAGACATCAAGCGAACACTGCTCATGATCAAGTTTGCTGAGAAGTCCCTGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 72 bp AAATGCTGTTTGCTGCTGAGGGGACAGGTCTCTCCTTaGGCAAAGGCCTTTCCAAGGAGTCATAAGACTCAA +
Preference number: 6 (lower is better)
Translates to: KCCLLLRGQVSP*AKAFPRSHKTQ
Trigger: TTGAGTCTTATGACTCCTTGGAAAGGCCTTTGCGCAAGGAGAGACCTGTCCCCTCAGCAGCAAACAGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp TACATCCTCTTCACTCTCCTCGCCACTGGAAAACTCTaGGTAACAGAACCGGCCCCCTTCATTACTAATCAC +
Preference number: 6 (lower is better)
Translates to: YILFTLLATGKL*VTEPAPFITNH
Trigger: GTGATTAGTAATGAAGGGGGCCGGTTCTGTTACCCAGAGTTTTCCAGTGGCGAGGAGAGTGAAGAGGATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 72 bp ACTAGGCTGAGATGTAAAGAGAGATTTGGGCCGGACTaGCGTACTCTTAGGTGTGCTCTTAGCAACATCAGC +
Preference number: 6 (lower is better)
Translates to: TRLRCKERFGPD*RTLRCALSNIS
Trigger: GCTGATGTTGCTAAGAGCACACCTAAGAGTACGCCAGTCCGGCCCAAATCTCTCTTTACATCTCAGCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CCA 72 bp GCAGCCCCTGCCATCTTGCTTCCCAACAACAGTTCTTaGATCCCGAGGAGAAAAATCCTCTGTTACTTCATG +
Preference number: 6 (lower is better)
Translates to: AAPAILLPNNSS*IPRRKILCYFM
Trigger: CATGAAGTAACAGAGGATTTTTCTCCTCGGGATCCAAGAACTGTTGTTGGGAAGCAAGATGGCAGGGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS CCA 72 bp GATTGGCTCTGTATTGGCTCTTATGATCATCTTCTTTaGCAGTGGGGGTGGTGTAGGTTGGGAAGCATTGGG +
Preference number: 6 (lower is better)
Translates to: DWLCIGSYDHLL*QWGWCRLGSIG
Trigger: CCCAATGCTTCCCAACCTACACCACCCCCACTGCCAAAGAAGATGATCATAAGAGCCAATACAGAGCCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 90 bp TTGTCCACAAAGAATCGAACAGGAGACAATGTGTTTGCTCTGAAGTaGGCAAAGCGAGGTTGCCCTCTCATGCGAATCTCCATGGCCAAC +
Preference number: 6 (lower is better)
Translates to: LSTKNRTGDNVFALK*AKRGCPLMRISMAN
Trigger: GTTGGCCATGGAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAACTTCAGAGCAAACACATTGTCTCCTGTTCGATTCTTTGTGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 90 bp ATGGCTTGCACAATGGCTGTTCCAGGTTCACAACTCGGTAAGGTTTaGCTTGCTCTTCTGTGGGGACAAGGTTTATGGTTACTGCTTGCC +
Preference number: 6 (lower is better)
Translates to: MACTMAVPGSQLGKV*LALLWGQGLWLLLA
Trigger: GGCAAGCAGTAACCATAAACCTTGTCCCCACAGAAGAGCAAGCAAAACCTTACCGAGTTGTGAACCTGGAACAGCCATTGTGCAAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 90 bp CTCCCTGATTCTCTTTCTGGGATGATGCTGCTTCAGAACAGGGCTTaGGGTTTTTCCCATCCGTTTCTCCTTTGGCGTCTTCTTCAGTCT +
Preference number: 6 (lower is better)
Translates to: LPDSLSGMMLLQNRA*GFSHPFLLWRLLQS
Trigger: AGACTGAAGAAGACGCCAAAGGAGAAACGGATGGGAAAAACCCAAAGCCCTGTTCTGAAGCAGCATCATCCCAGAAAGAGAATCAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS TCA 72 bp TGGGGAGCTGTGGCTGGAACTATAGCTTCTCTGTGGTaGAGACTGACCTCTGTTGAGACAGTTGTTAAACTC +
Preference number: 6 (lower is better)
Translates to: WGAVAGTIASLW*RLTSVETVVKL
Trigger: GAGTTTAACAACTGTCTCAACAGAGGTCAGTCTTCACCACAGAGAAGCTATAGTTCCAGCCACAGCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000560854.1
ENST00000682557.1
CDS GCA 72 bp GCCAACAGCTCTTCATCACTCTCATCCCAACTCTCGTaGTCCTCCTCCATGTTACTGAAAAGTACATCCTCT +
Preference number: 6 (lower is better)
Translates to: ANSSSSLSSQLS*SSSMLLKSTSS
Trigger: AGAGGATGTACTTTTCAGTAACATGGAGGAGGAGCACGAGAGTTGGGATGAGAGTGATGAAGAGCTGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 72 bp GTAGAACAGTGGATTTTGGTGACCTGCAAATGCTGCTaGCTGATCGTTCCTCTGGAAGTTTTGTCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: VEQWILVTCKCC*LIVPLEVLSQR
Trigger: CCTCTGAGACAAAACTTCCAGAGGAACGATCAGGCAGCAGCATTTGCAGGTCACCAAAATCCACTGTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 72 bp GTGGCTGTAGAACAGTGGATTTTGGTGACCTGCAAATaGTGCTGCCTGATCGTTCCTCTGGAAGTTTTGTCT +
Preference number: 6 (lower is better)
Translates to: VAVEQWILVTCK*CCLIVPLEVLS
Trigger: AGACAAAACTTCCAGAGGAACGATCAGGCAGCAGCATTTGCAGGTCACCAAAATCCACTGTTCTACAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 72 bp GGTTCACAACTCGGTAAGGTTTTGCTTGCTCTTCTGTaGGGACAAGGTTTATGGTTACTGCTTGCCCAGCAA +
Preference number: 6 (lower is better)
Translates to: GSQLGKVLLALL*GQGLWLLLAQQ
Trigger: TTGCTGGGCAAGCAGTAACCATAAACCTTGTCCCCACAGAAGAGCAAGCAAAACCTTACCGAGTTGTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 72 bp GCAGTGCAGCATCCTCCTCACAATATCTCTGAGAGATaGTCCATCAGCCTCTGCCTATATACCTCCAATAAC +
Preference number: 6 (lower is better)
Translates to: AVQHPPHNISER*SISLCLYTSNN
Trigger: GTTATTGGAGGTATATAGGCAGAGGCTGATGGACCATCTCTCAGAGATATTGTGAGGAGGATGCTGCACTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 72 bp AAGAATCGAACAGGAGACAATGTGTTTGCTCTGAAGTaGGCAAAGCGAGGTTGCCCTCTCATGCGAATCTCC +
Preference number: 6 (lower is better)
Translates to: KNRTGDNVFALK*AKRGCPLMRIS
Trigger: GGAGATTCGCATGAGAGGGCAACCTCGCTTTGCCAACTTCAGAGCAAACACATTGTCTCCTGTTCGATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 72 bp TGGCTGTTCCAGGTTCACAACTCGGTAAGGTTTTGCTaGCTCTTCTGTGGGGACAAGGTTTATGGTTACTGC +
Preference number: 6 (lower is better)
Translates to: WLFQVHNSVRFC*LFCGDKVYGYC
Trigger: GCAGTAACCATAAACCTTGTCCCCACAGAAGAGCAAGCAAAACCTTACCGAGTTGTGAACCTGGAACAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 72 bp GACTTCTCAGCAAACTTGATCATGAGCAGTGTTCGCTaGATGTCTAGCCAGTTTTGGAGCAGGGTGTTCCTC +
Preference number: 6 (lower is better)
Translates to: DFSANLIMSSVR*MSSQFWSRVFL
Trigger: GAGGAACACCCTGCTCCAAAACTGGCTAGACATCAAGCGAACACTGCTCATGATCAAGTTTGCTGAGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 90 bp TCTCCATCCAGCTTTGTTCCGTTGCTGGTGAGGCACTGTGTTCCTTaGGAGGAGGAGAGTGCTCTGCTTTTTAGAGTTTCCAGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: SPSSFVPLLVRHCVP*EEESALLFRVSSFS
Trigger: AGAAAAACTGGAAACTCTAAAAAGCAGAGCACTCTCCTCCTCCAAAGGAACACAGTGCCTCACCAGCAACGGAACAAAGCTGGATGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 90 bp CTACTTTCCATGGATTTTTGGAGGTCCTTGGAGATTGGCTCTGTATaGGCTCTTATGATCATCTTCTTTGGCAGTGGGGGTGGTGTAGGT +
Preference number: 6 (lower is better)
Translates to: LLSMDFWRSLEIGSV*ALMIIFFGSGGGVG
Trigger: ACCTACACCACCCCCACTGCCAAAGAAGATGATCATAAGAGCCAATACAGAGCCAATCTCCAAGGACCTCCAAAAATCCATGGAAAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 72 bp TTGGATGCTAAGCTCACCACATATACTTTGCCCATCTaGCACTATCATAGTGGGCTTCACAGCTATAGTGGG +
Preference number: 6 (lower is better)
Translates to: LDAKLTTYTLPI*HYHSGLHSYSG
Trigger: CCCACTATAGCTGTGAAGCCCACTATGATAGTGGCAGATGGGCAAAGTATATGTGGTGAGCTTAGCATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 72 bp CAGTGTTCTTGGATGCTAAGCTCACCACATATACTTTaGCCATCTGCCACTATCATAGTGGGCTTCACAGCT +
Preference number: 6 (lower is better)
Translates to: QCSWMLSSPHIL*PSATIIVGFTA
Trigger: AGCTGTGAAGCCCACTATGATAGTGGCAGATGGGCAAAGTATATGTGGTGAGCTTAGCATCCAAGAACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 72 bp TGCTCTTCTGTGGGGACAAGGTTTATGGTTACTGCTTaGCCAGCAACATCTGTAGAGGCTTTACTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: CSSVGTRFMVTA*PATSVEALLSS
Trigger: GGAAGAAAGTAAAGCCTCTACAGATGTTGCTGGGCAAGCAGTAACCATAAACCTTGTCCCCACAGAAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 72 bp TGCTTGCTCTTCTGTGGGGACAAGGTTTATGGTTACTaGTTGCCCAGCAACATCTGTAGAGGCTTTACTTTC +
Preference number: 6 (lower is better)
Translates to: CLLFCGDKVYGY*LPSNICRGFTF
Trigger: GAAAGTAAAGCCTCTACAGATGTTGCTGGGCAAGCAGTAACCATAAACCTTGTCCCCACAGAAGAGCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 72 bp GAGTCCCTCAAAGCAGTGTTAATAACCCTTAGCACTTaGCACAGGGCTCATGGGTGCAGGTGTTTAATACAT +
Preference number: 6 (lower is better)
Translates to: ESLKAVLITLST*HRAHGCRCLIH
Trigger: ATGTATTAAACACCTGCACCCATGAGCCCTGTGCCAAGTGCTAAGGGTTATTAACACTGCTTTGAGGGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 72 bp CACCGCACTCCAGCCTGGTTTAATTGGCTCCAACTCTaGGCATTATGTTGTTGCTTCCTTTTCTTTCCTTAC +
Preference number: 6 (lower is better)
Translates to: HRTPAWFNWLQL*ALCCCFLFFPY
Trigger: GTAAGGAAAGAAAAGGAAGCAACAACATAATGCCCAGAGTTGGAGCCAATTAAACCAGGCTGGAGTGCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569819.5
ENST00000682557.1
CDS CAA 90 bp TTTGTTCTCACAGTGTTCTTGGATGCTAAGCTCACCACATATACTTaGCCCATCTGCCACTATCATAGTGGGCTTCACAGCTATAGTGGG +
Preference number: 6 (lower is better)
Translates to: FVLTVFLDAKLTTYT*PICHYHSGLHSYSG
Trigger: CCCACTATAGCTGTGAAGCCCACTATGATAGTGGCAGATGGGCAAAGTATATGTGGTGAGCTTAGCATCCAAGAACACTGTGAGAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 90 bp AGGTTTTGCTTGCTCTTCTGTGGGGACAAGGTTTATGGTTACTGCTaGCCCAGCAACATCTGTAGAGGCTTTACTTTCTTCCTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: RFCLLFCGDKVYGYC*PSNICRGFTFFLLS
Trigger: ACTGAGAAGGAAGAAAGTAAAGCCTCTACAGATGTTGCTGGGCAAGCAGTAACCATAAACCTTGTCCCCACAGAAGAGCAAGCAAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS TCA 72 bp AAATTGCCCGTGTTCCTGATGCGGTGGTTGTTACTGTaGTTGGCATTAGTTTTCACATTGCCATGGGTGATG +
Preference number: 6 (lower is better)
Translates to: KLPVFLMRWLLL*LALVFTLPWVM
Trigger: CATCACCCATGGCAATGTGAAAACTAATGCCAATCACAGTAACAACCACCGCATCAGGAACACGGGCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS TCA 72 bp ACTTCTGTGCTCCCACTCAGAATAACATGCTTGCCCTaGGTTTCCTTTATCCCACCTATCATGCAACTTGGT +
Preference number: 6 (lower is better)
Translates to: TSVLPLRITCLP*VSFIPPIMQLG
Trigger: ACCAAGTTGCATGATAGGTGGGATAAAGGAAACTCAGGGCAAGCATGTTATTCTGAGTGGGAGCACAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS TCA 72 bp TCGCATTTAACAGCCAGTTTCTTCAAGGCATCTGTATaGAGGCTTCGGATTTTACCCACTACTTCCTCCCGA +
Preference number: 6 (lower is better)
Translates to: SHLTASFFKASV*RLRILPTTSSR
Trigger: TCGGGAGGAAGTAGTGGGTAAAATCCGAAGCCTTCATACAGATGCCTTGAAGAAACTGGCTGTTAAATGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS TCA 72 bp AGAGAATTGCAGAATCTTTGCATTGGCAGGCACCTCTaGAGTAATTTAGCTCAACCCTCTTTGCAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: RELQNLCIGRHL*SNLAQPSLQCS
Trigger: GCTGCACTGCAAAGAGGGTTGAGCTAAATTACTTCAGAGGTGCCTGCCAATGCAAAGATTCTGCAATTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS GCA 72 bp TTTGTCCACAAAGAATCGAACAGGAGACAATGTGTTTaGTCTGAAGTTGGCAAAGCGAGGTTGCCCTCTCAT +
Preference number: 6 (lower is better)
Translates to: FVHKESNRRQCV*SEVGKARLPSH
Trigger: ATGAGAGGGCAACCTCGCTTTGCCAACTTCAGAGCAAACACATTGTCTCCTGTTCGATTCTTTGTGGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 72 bp CTGGTGATGTGGAGTCAGATGACACCATGCTCTGAATaGTTCCTTGTCCATAAGAGACCACAGAATTTTCCT +
Preference number: 6 (lower is better)
Translates to: LVMWSQMTPCSE*FLVHKRPQNFP
Trigger: AGGAAAATTCTGTGGTCTCTTATGGACAAGGAAGCATTCAGAGCATGGTGTCATCTGACTCCACATCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 72 bp TTGCTCTTCTGTGGGGACAAGGTTTATGGTTACTGCTaGCCCAGCAACATCTGTAGAGGCTTTACTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LLFCGDKVYGYC*PSNICRGFTFF
Trigger: GAAGAAAGTAAAGCCTCTACAGATGTTGCTGGGCAAGCAGTAACCATAAACCTTGTCCCCACAGAAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 72 bp ACAATGGCTGTTCCAGGTTCACAACTCGGTAAGGTTTaGCTTGCTCTTCTGTGGGGACAAGGTTTATGGTTA +
Preference number: 6 (lower is better)
Translates to: TMAVPGSQLGKV*LALLWGQGLWL
Trigger: TAACCATAAACCTTGTCCCCACAGAAGAGCAAGCAAAACCTTACCGAGTTGTGAACCTGGAACAGCCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 72 bp ATGGATTTTTGGAGGTCCTTGGAGATTGGCTCTGTATaGGCTCTTATGATCATCTTCTTTGGCAGTGGGGGT +
Preference number: 6 (lower is better)
Translates to: MDFWRSLEIGSV*ALMIIFFGSGG
Trigger: ACCCCCACTGCCAAAGAAGATGATCATAAGAGCCAATACAGAGCCAATCTCCAAGGACCTCCAAAAATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS TCA 72 bp TTCTCGCCTCATTTCATTCATTTCATCTTCCATCACTaGTACCCTTTCTTCCAGTTGATCGCATCGGCTCCT +
Preference number: 6 (lower is better)
Translates to: FSPHFIHFIFHH*YPFFQLIASAP
Trigger: AGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGATGAAATGAATGAAATGAGGCGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 72 bp GGGTTACCAGGAGATAATCCCCCATTACAAATCTTCTaGGATAAACTACTGGCTGTCTCAGAACGTGATTCT +
Preference number: 6 (lower is better)
Translates to: GLPGDNPPLQIF*DKLLAVSERDS
Trigger: AGAATCACGTTCTGAGACAGCCAGTAGTTTATCCCAGAAGATTTGTAATGGGGGATTATCTCCTGGTAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 72 bp CTTTTGTCGTGGACTGGTGCTAGAAGTCCATACTTCTaGGTATCGAATTGCACTGGATTTTTGGAAATGGGC +
Preference number: 6 (lower is better)
Translates to: LLSWTGARSPYF*VSNCTGFLEMG
Trigger: GCCCATTTCCAAAAATCCAGTGCAATTCGATACCAAGAAGTATGGACTTCTAGCACCAGTCCACGACAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 90 bp ATTCTCTGCAGAGACTTGTTTCGCAGGGGGATGGTATTCCATTTTTaGTCCACAAAGAATCGAACAGGAGACAATGTGTTTGCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: ILCRDLFRRGMVFHF*STKNRTGDNVFALK
Trigger: CTTCAGAGCAAACACATTGTCTCCTGTTCGATTCTTTGTGGACAAAAAATGGAATACCATCCCCCTGCGAAACAAGTCTCTGCAGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 90 bp TCTGTAGAGGCTTTACTTTCTTCCTTCTCAGTTTGTACAGCAATCTaGCCATCTTTCTCTTCTAATCGGAGAGCAAGGACTGCTTTGTGG +
Preference number: 6 (lower is better)
Translates to: SVEALLSSFSVCTAI*PSFSSNRRARTALW
Trigger: CCACAAAGCAGTCCTTGCTCTCCGATTAGAAGAGAAAGATGGCAAGATTGCTGTACAAACTGAGAAGGAAGAAAGTAAAGCCTCTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 72 bp CCTCACAATATCTCTGAGAGATGGTCCATCAGCCTCTaGCTATATACCTCCAATAACAGGGATCTTTACTTT +
Preference number: 6 (lower is better)
Translates to: PHNISERWSISL*LYTSNNRDLYF
Trigger: AAAGTAAAGATCCCTGTTATTGGAGGTATATAGGCAGAGGCTGATGGACCATCTCTCAGAGATATTGTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 72 bp TTTTGTCGTGGACTGGTGCTAGAAGTCCATACTTCTTaGTATCGAATTGCACTGGATTTTTGGAAATGGGCA +
Preference number: 6 (lower is better)
Translates to: FCRGLVLEVHTS*YRIALDFWKWA
Trigger: TGCCCATTTCCAAAAATCCAGTGCAATTCGATACCAAGAAGTATGGACTTCTAGCACCAGTCCACGACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 72 bp TTAGCCATGACACAAAGACTACTTTCCATGGATTTTTaGAGGTCCTTGGAGATTGGCTCTGTATTGGCTCTT +
Preference number: 6 (lower is better)
Translates to: LAMTQRLLSMDF*RSLEIGSVLAL
Trigger: AAGAGCCAATACAGAGCCAATCTCCAAGGACCTCCAAAAATCCATGGAAAGTAGTCTTTGTGTCATGGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CCA 72 bp AGAGTGAGACTCGTCTGGTTTAATTGGCTCCAACTCTaGGCATTATGTTGTTGCTTCCTTTTCTTTCCTTAC +
Preference number: 6 (lower is better)
Translates to: RVRLVWFNWLQL*ALCCCFLFFPY
Trigger: GTAAGGAAAGAAAAGGAAGCAACAACATAATGCCCAGAGTTGGAGCCAATTAAACCAGACGAGTCTCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567337.5
ENST00000567808.5
ENST00000569159.1
CDS CAA 72 bp TGCCCTGAGTTTCCTTTATCCCACCTATCATGCAACTaGGTGGAAGCTTTCTTTCCAATGATCGTTTATAGC +
Preference number: 6 (lower is better)
Translates to: CPEFPLSHLSCN*VEAFFPMIVYS
Trigger: GCTATAAACGATCATTGGAAAGAAAGCTTCCACCAAGTTGCATGATAGGTGGGATAAAGGAAACTCAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 72 bp CCATCTTTCTCTTCTAATCGGAGAGCAAGGACTGCTTaGTGGGTCTCTGGAACTTTTATTGAGCTTTTGGAA +
Preference number: 6 (lower is better)
Translates to: PSFSSNRRARTA*WVSGTFIELLE
Trigger: TTCCAAAAGCTCAATAAAAGTTCCAGAGACCCACAAAGCAGTCCTTGCTCTCCGATTAGAAGAGAAAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 72 bp ATTAGCCATGACACAAAGACTACTTTCCATGGATTTTaGGAGGTCCTTGGAGATTGGCTCTGTATTGGCTCT +
Preference number: 6 (lower is better)
Translates to: ISHDTKTTFHGF*EVLGDWLCIGS
Trigger: AGAGCCAATACAGAGCCAATCTCCAAGGACCTCCAAAAATCCATGGAAAGTAGTCTTTGTGTCATGGCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 90 bp TTAGCCATGACACAAAGACTACTTTCCATGGATTTTTGGAGGTCCTaGGAGATTGGCTCTGTATTGGCTCTTATGATCATCTTCTTTGGC +
Preference number: 6 (lower is better)
Translates to: LAMTQRLLSMDFWRS*EIGSVLALMIIFFG
Trigger: GCCAAAGAAGATGATCATAAGAGCCAATACAGAGCCAATCTCCAAGGACCTCCAAAAATCCATGGAAAGTAGTCTTTGTGTCATGGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 90 bp ATAGGTGGGATTAGCCATGACACAAAGACTACTTTCCATGGATTTTaGGAGGTCCTTGGAGATTGGCTCTGTATTGGCTCTTATGATCAT +
Preference number: 6 (lower is better)
Translates to: IGGISHDTKTTFHGF*EVLGDWLCIGSYDH
Trigger: ATGATCATAAGAGCCAATACAGAGCCAATCTCCAAGGACCTCCAAAAATCCATGGAAAGTAGTCTTTGTGTCATGGCTAATCCCACCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS GCA 72 bp ACTGGTGCTAGAAGTCCATACTTCTTGGTATCGAATTaGACTGGATTTTTGGAAATGGGCACTTATTTGTCC +
Preference number: 6 (lower is better)
Translates to: TGARSPYFLVSN*TGFLEMGTYLS
Trigger: GGACAAATAAGTGCCCATTTCCAAAAATCCAGTGCAATTCGATACCAAGAAGTATGGACTTCTAGCACCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS GCA 72 bp TGTGATCCTGCAATAGTATCTAACTACCAAATTTCCTaGTACCAAATAATCCACATACACATGGCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: CDPAIVSNYQIS*YQIIHIHMAAC
Trigger: GCAGGCTGCCATGTGTATGTGGATTATTTGGTAGCAGGAAATTTGGTAGTTAGATACTATTGCAGGATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 72 bp AACGTGATTCTTCTGTTAAAGAAGAATCTGGTGATGTaGAGTCAGATGACACCATGCTCTGAATGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: NVILLLKKNLVM*SQMTPCSECFL
Trigger: AAGGAAGCATTCAGAGCATGGTGTCATCTGACTCCACATCACCAGATTCTTCTTTAACAGAAGAATCACGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 72 bp AGAGACTTGTTTCGCAGGGGGATGGTATTCCATTTTTaGTCCACAAAGAATCGAACAGGAGACAATGTGTTT +
Preference number: 6 (lower is better)
Translates to: RDLFRRGMVFHF*STKNRTGDNVF
Trigger: AAACACATTGTCTCCTGTTCGATTCTTTGTGGACAAAAAATGGAATACCATCCCCCTGCGAAACAAGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CAA 90 bp TTTAGGTATCTTTTGTCGTGGACTGGTGCTAGAAGTCCATACTTCTaGGTATCGAATTGCACTGGATTTTTGGAAATGGGCACTTATTTG +
Preference number: 6 (lower is better)
Translates to: FRYLLSWTGARSPYF*VSNCTGFLEMGTYL
Trigger: CAAATAAGTGCCCATTTCCAAAAATCCAGTGCAATTCGATACCAAGAAGTATGGACTTCTAGCACCAGTCCACGACAAAAGATACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS TCA 72 bp CTTGACTGCATAGTTATTAAGTGGATCTTTTGCATATaGAGCAGTATAGTAAACCGCATCACCTGCCTCACA +
Preference number: 6 (lower is better)
Translates to: LDCIVIKWIFCI*SSIVNRITCLT
Trigger: TGTGAGGCAGGTGATGCGGTTTACTATACTGCTTCATATGCAAAAGATCCACTTAATAACTATGCAGTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312493.5
ENST00000560626.6
ENST00000682557.1
CDS CAA 72 bp GTGGTGCCTACATGCATCTCCATGATTTTGCTCATATaGTTGTCTCTGATTGGAATATTCTTTCTCCCCTTT +
Preference number: 6 (lower is better)
Translates to: VVPTCISMILLI*LSLIGIFFLPF
Trigger: AAAGGGGAGAAAGAATATTCCAATCAGAGACAACAATATGAGCAAAATCATGGAGATGCATGTAGGCACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 72 bp GCCTATATACCTCCAATAACAGGGATCTTTACTTTTTaGAGTCTGCTTGATCCAAGCCAGAAATCTGGGATA +
Preference number: 6 (lower is better)
Translates to: AYIPPITGIFTF*SLLDPSQKSGI
Trigger: TATCCCAGATTTCTGGCTTGGATCAAGCAGACTCAAAAAAGTAAAGATCCCTGTTATTGGAGGTATATAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS TCA 72 bp ATCTACTTTTGGTCTTTGATGATGGTGACGTATAGATaGGTTTTTGGTGTGGATGTCCTTTCTGTTTGTTGG +
Preference number: 6 (lower is better)
Translates to: IYFWSLMMVTYR*VFGVDVLSVCW
Trigger: CCAACAAACAGAAAGGACATCCACACCAAAAACTCATCTATACGTCACCATCATCAAAGACCAAAAGTAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CCA 72 bp ATAATCCCCCATTACAAATCTTCTGGGATAAACTACTaGCTGTCTCAGAACGTGATTCTTCTGTTAAAGAAG +
Preference number: 6 (lower is better)
Translates to: IIPHYKSSGINY*LSQNVILLLKK
Trigger: CTTCTTTAACAGAAGAATCACGTTCTGAGACAGCCAGTAGTTTATCCCAGAAGATTTGTAATGGGGGATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 72 bp ACTTCTTGGTATCGAATTGCACTGGATTTTTGGAAATaGGCACTTATTTGTCCTGGTGTCAATGAAGATGAT +
Preference number: 6 (lower is better)
Translates to: TSWYRIALDFWK*ALICPGVNEDD
Trigger: ATCATCTTCATTGACACCAGGACAAATAAGTGCCCATTTCCAAAAATCCAGTGCAATTCGATACCAAGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 72 bp ACTCCGAGCATAAGTTGGCTCGTCATGAATGATAATTaGAAAAGGTGGCATACCAGCATTGTTATAACTATT +
Preference number: 6 (lower is better)
Translates to: TPSISWLVMNDN*KRWHTSIVITI
Trigger: AATAGTTATAACAATGCTGGTATGCCACCTTTTCCAATTATCATTCATGACGAGCCAACTTATGCTCGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 72 bp GATAGCAATGTTTACTGGTTTAATTGGCTCCAACTCTaGGCATTATGTTGTTGCTTCCTTTTCTTTCCTTAC +
Preference number: 6 (lower is better)
Translates to: DSNVYWFNWLQL*ALCCCFLFFPY
Trigger: GTAAGGAAAGAAAAGGAAGCAACAACATAATGCCCAGAGTTGGAGCCAATTAAACCAGTAAACATTGCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558305.5
CDS CAA 90 bp TTAAATTTAATTTCAGACAAATTAGGTGACTTAACAGGGATGGTTTaGGAGGAAATGTTTGTAGCTGTGGGTGATGTAGGTGCTGATTTG +
Preference number: 6 (lower is better)
Translates to: LNLISDKLGDLTGMV*EEMFVAVGDVGADL
Trigger: CAAATCAGCACCTACATCACCCACAGCTACAAACATTTCCTCCAAAACCATCCCTGTTAAGTCACCTAATTTGTCTGAAATTAAATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1
CDS CCA 72 bp TACTCCCAAATCACAAAAAGCTTCTGGAACTTAGAATaGAAGTCTTCTTCTTACACAATGTATTTTCAACTG +
Preference number: 6 (lower is better)
Translates to: YSQITKSFWNLE*KSSSYTMYFQL
Trigger: CAGTTGAAAATACATTGTGTAAGAAGAAGACTTCCATTCTAAGTTCCAGAAGCTTTTTGTGATTTGGGAGTA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560854.1
CDS CAA 72 bp CCTGCTATCTCCTTTAACACTTCAGTTAGTCCATTATaGTTATCTGACATCTTCTTTGCACTATCATTATTG +
Preference number: 6 (lower is better)
Translates to: PAISFNTSVSPL*LSDIFFALSLL
Trigger: CAATAATGATAGTGCAAAGAAGATGTCAGATAACAATAATGGACTAACTGAAGTGTTAAAGGAGATAGCAGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312493.5
ENST00000558305.5
ENST00000560626.6
ENST00000564328.5
ENST00000682557.1