Pregenerated sensors for PDZK1IP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000162366Ensembl transcript IDs: ENST00000294338.7, ENST00000371885.1, ENST00000489919.1, ENST00000491793.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGAGACCCCAGGGCCACAGCCGAGCCCCAACCTAGACACGGTCTaGGCTCCAACCTTGGCTGGCTATACTTCAAGGGCGGGTAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: QETPGPQPSPNLDTV*APTLAGYTSRAGRA Trigger: GGCCCTACCCGCCCTTGAAGTATAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGCCCTGGGGTCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| 3UTR TCA 90 bp | GGGAGGTGCTCAGCTGACTGTCCTCTCCAGAAGGCTCTTCTGAGCTaGGCAGGAGACCCCAGGGCCACAGCCGAGCCCCAACCTAGACAC | + |
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Preference number: 1 (lower is better) Translates to: GRCSADCPLQKALLS*AGDPRATAEPQPRH Trigger: GTGTCTAGGTTGGGGCTCGGCTGTGGCCCTGGGGTCTCCTGCTCAGCTCAGAAGAGCCTTCTGGAGAGGACAGTCAGCTGAGCACCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| 3UTR TCA 90 bp | AGGATGGGAGGTGCTCAGCTGACTGTCCTCTCCAGAAGGCTCTTCTaGGCTGAGCAGGAGACCCCAGGGCCACAGCCGAGCCCCAACCTA | + |
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Preference number: 1 (lower is better) Translates to: RMGGAQLTVLSRRLF*AEQETPGPQPSPNL Trigger: TAGGTTGGGGCTCGGCTGTGGCCCTGGGGTCTCCTGCTCAGCTCAGAAGAGCCTTCTGGAGAGGACAGTCAGCTGAGCACCTCCCATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| 3UTR-3UTR CCA 90 bp | GCCACAGCCGAGCCCCAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTAGGGCCGGCATGGGGCTaGAGGGAGTCAGCCCACTAT | + |
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Preference number: 2 (lower is better) Translates to: ATAEPQPRHGLSSNLGWLGPAWG*RESAHY Trigger: ATAGTGGGCTGACTCCCTCCAGCCCCATGCCGGCCC...TAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGACCCCAGGGCCACAGCCGAGCCCCAACCTAGACACGGTCTGAGCTCCAACTCCATCCCATGTGCCTaGGAGTCTTGGGGTTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GDPRATAEPQPRHGLSSNSIPCA*ESWGWS Trigger: GCTCCAACCCCAAGACTCCCAGGCACATGGGATGGA...GTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGCCCTGGGGTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| 3UTR-3UTR GCA 90 bp | GCCACAGCCGAGCCCCAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTAGACATCCATCCCATGTaGCTGGGAGTCTTGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: ATAEPQPRHGLSSNLGWLDIHPM*LGVLGL Trigger: CAACCCCAAGACTCCCAGGCACATGGGATGGATGTC...TAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| 3UTR TCA 72 bp | CCAGGGCCACAGCCGAGCCCCAACCTAGACACGGTCTaGGCTCCAACCTTGGCTGGCTATACTTCAAGGGCG | + |
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Preference number: 3 (lower is better) Translates to: PGPQPSPNLDTV*APTLAGYTSRA Trigger: CGCCCTTGAAGTATAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| 3UTR CCA 72 bp | GCTATACTTCAAGGGCGGGTAGGGCCGGCATGGGGCTaGAGGGAGTCAGCCCACTATTGCAGATTCCACACA | + |
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Preference number: 3 (lower is better) Translates to: AILQGRVGPAWG*RESAHYCRFHT Trigger: TGTGTGGAATCTGCAATAGTGGGCTGACTCCCTCCAGCCCCATGCCGGCCCTACCCGCCCTTGAAGTATAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| 3UTR-3UTR CAA 90 bp | GGAGACCCCAGGGCCACAGCCGAGCCCCAACCTAGACACGGTCTGAGCTCCAACGGAGTCAGCCCACTATaGCAGATTCCACACAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: GDPRATAEPQPRHGLSSNGVSPL*QIPHKE Trigger: TTCTTTGTGTGGAATCTGCAATAGTGGGCTGACTCC...GTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGCCCTGGGGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR GCA 90 bp | GCCACAGCCGAGCCCCAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTAGGGTGCTGCGGACCTTaGCTTCCTCCTCGGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: ATAEPQPRHGLSSNLGWLGCCGP*LPPRAH Trigger: ATGTGCCCGAGGAGGAAGGCAAGGTCCGCAGCACCC...TAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CCA 90 bp | CCACACAAAGAAGGAGGGGGCTTGGGTGGTAGCACTGGACATCCATCCCATGTGCTGGCCGCCGGTGTCTaGGCTCCTGGAGCTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PHKEGGGLGGSTGHPSHVLAAGV*APGAAV Trigger: CACAGCAGCTCCAGGAGCCCAGACACCGGCGGCCAG...CACATGGGATGGATGTCCAGTGCTACCACCCAAGCCCCCTCCTTCTTTGTGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR TCA 90 bp | GCCACAGCCGAGCCCCAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTATCCAGAAGGCTCTTCTaGGCTGAGCAGGAGACCCCA | + |
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Preference number: 4 (lower is better) Translates to: ATAEPQPRHGLSSNLGWLSRRLF*AEQETP Trigger: TGGGGTCTCCTGCTCAGCTCAGAAGAGCCTTCTGGA...TAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR GCA 90 bp | GAGGGGGCTTGGGTGGTAGCACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGTCAGGATCATGTGTaGAGGCTCCGGCTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: EGAWVVALDIHPMCLGVLGQDHV*RLRLLL Trigger: CAGGAGGAGCCGGAGCCTGCACACATGATCCTGACC...CAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCACCCAAGCCCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR GCA 90 bp | GCCACAGCCGAGCCCCAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTAGAGCAGGATGGGAGGTaGTCAGCTGACTGTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ATAEPQPRHGLSSNLGWLEQDGR*SADCPL Trigger: GAGAGGACAGTCAGCTGAGCACCTCCCATCCTGCTC...TAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CCA 90 bp | CAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTATACTTCAAGGGCGGGCTGACAGCTGGCAGGTaGCACTGCCGTGAGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QPRHGLSSNLGWLYFKGGLTAGR*HCREQA Trigger: GGCCTGCTCACGGCAGTGCCACCTGCCAGCTGTCAG...CCCGCCCTTGAAGTATAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CCA 90 bp | GAGGGGGCTTGGGTGGTAGCACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGCTCCGGCTCCTCCTaGCACCAGAAGTGGTTGACT | + |
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Preference number: 4 (lower is better) Translates to: EGAWVVALDIHPMCLGVLGSGSS*HQKWLT Trigger: AGTCAACCACTTCTGGTGCCAGGAGGAGCCGGAGCC...CAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCACCCAAGCCCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CCA 90 bp | ACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGCCACAGAGAAGGGGCCGGCATGGGGCTaGAGGGAGTCAGCCCACTAT | + |
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Preference number: 4 (lower is better) Translates to: TGHPSHVPGSLGVGATEKGPAWG*RESAHY Trigger: ATAGTGGGCTGACTCCCTCCAGCCCCATGCCGGCCC...CTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR TCA 90 bp | ACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGCCACAGAGAAGAAGGCTCTTCTGAGCTaGGCAGGAGACCCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TGHPSHVPGSLGVGATEKKALLS*AGDPRA Trigger: GGCCCTGGGGTCTCCTGCTCAGCTCAGAAGAGCCTT...CTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR TCA 90 bp | GAGGGGGCTTGGGTGGTAGCACTGGACATCCATCCCATGTGCCTGGGAGTCTTGCTGAGGGGCTGTTGCTaGGCCTCAGCCCCAGAAATA | + |
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Preference number: 4 (lower is better) Translates to: EGAWVVALDIHPMCLGVLLRGCC*ASAPEI Trigger: TATTTCTGGGGCTGAGGCTCAGCAACAGCCCCTCAG...CAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCACCCAAGCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR GCA 90 bp | TTGGGTGGTAGCACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGCTGGCAGGTGGCACTaGCGTGAGCAGGCCCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LGGSTGHPSHVPGSLGVGAGRWH*REQAQN Trigger: ATTCTGGGCCTGCTCACGGCAGTGCCACCTGCCAGC...TCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCACCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR TCA 90 bp | TTGGGTGGTAGCACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGATGGGAGGTGCTCAGCTaGCTGTCCTCTCCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LGGSTGHPSHVPGSLGVGWEVLS*LSSPEG Trigger: GCCTTCTGGAGAGGACAGTCAGCTGAGCACCTCCCA...TCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCACCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR TCA 90 bp | CAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTATACTTCAAGGGCGGGGACTCACTGGAAGCCTaGGGGGCTGTTGCTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QPRHGLSSNLGWLYFKGGDSLEA*GAVAEP Trigger: AGGCTCAGCAACAGCCCCTCAGGCTTCCAGTGAGTC...CCCGCCCTTGAAGTATAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CCA 90 bp | GCCACAGCCGAGCCCCAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTATGGGAGTCTTGGGGTTaGAGCCACAGAGAAGGTTAC | + |
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Preference number: 4 (lower is better) Translates to: ATAEPQPRHGLSSNLGWLWESWG*SHREGY Trigger: GTAACCTTCTCTGTGGCTCCAACCCCAAGACTCCCA...TAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR TCA 90 bp | CAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTATACTTCAAGGGCGGGCATGCTCACTGGACCTaGAACTGGCCGCCATCGAAG | + |
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Preference number: 4 (lower is better) Translates to: QPRHGLSSNLGWLYFKGGHAHWT*NWPPSK Trigger: CTTCGATGGCGGCCAGTTTCAGGTCCAGTGAGCATG...CCCGCCCTTGAAGTATAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR TCA 90 bp | CAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTATACTTCAAGGGCGGGAACCTAGACACGGTCTaGGCTCCAACCTTGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QPRHGLSSNLGWLYFKGGNLDTV*APTLAG Trigger: GCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTT...CCCGCCCTTGAAGTATAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR GCA 90 bp | CCACACAAAGAAGGAGGGGGCTTGGGTGGTAGCACTGGACATCCATCCCATGTGGTTACATCGGGGTGCTaGGGACCTTGCCTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PHKEGGGLGGSTGHPSHVVTSGC*GPCLPP Trigger: AGGAGGAAGGCAAGGTCCGCAGCACCCCGATGTAAC...CACATGGGATGGATGTCCAGTGCTACCACCCAAGCCCCCTCCTTCTTTGTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CCA 90 bp | CAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTATACTTCAAGGGCGGGCGGTGTCTGGGCTCCTaGAGCTGCTGTGGAGTCTAT | + |
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Preference number: 4 (lower is better) Translates to: QPRHGLSSNLGWLYFKGGRCLGS*SCCGVY Trigger: ATAGACTCCACAGCAGCTCCAGGAGCCCAGACACCG...CCCGCCCTTGAAGTATAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CCA 90 bp | CAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTATACTTCAAGGGCGGGTCCATCCCATGTGCCTaGGAGTCTTGGGGTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QPRHGLSSNLGWLYFKGGSIPCA*ESWGWS Trigger: GCTCCAACCCCAAGACTCCCAGGCACATGGGATGGA...CCCGCCCTTGAAGTATAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CCA 90 bp | GCCACAGCCGAGCCCCAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTATCTGAGCTCCAACCTTaGCTGGCTATACTTCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: ATAEPQPRHGLSSNLGWLSELQP*LAILQG Trigger: CCCTTGAAGTATAGCCAGCCAAGGTTGGAGCTCAGA...TAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR GCA 90 bp | ACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGCCACAGAGAAGCTGGGCTCCTGGAGCTaGTGTGGAGTCTATTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TGHPSHVPGSLGVGATEKLGSWS*CGVYWC Trigger: ACACCAATAGACTCCACAGCAGCTCCAGGAGCCCAG...CTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR GCA 90 bp | CAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTATACTTCAAGGGCGGGCACCAGGACTCCATCTaGCTTGTTTCCGACGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: QPRHGLSSNLGWLYFKGGHQDSI*LVSDGQ Trigger: CTGACCGTCGGAAACAAGGCAGATGGAGTCCTGGTG...CCCGCCCTTGAAGTATAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR GCA 90 bp | ACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGCCACAGAGAAGAAGGTTACATCGGGGTaGTGCGGACCTTGCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TGHPSHVPGSLGVGATEKKVTSG*CGPCLP Trigger: AGGAAGGCAAGGTCCGCAGCACCCCGATGTAACCTT...CTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR TCA 90 bp | CAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTATACTTCAAGGGCGGGCTATTGGTGTCCGCCTaGAATCAACCTGGGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: QPRHGLSSNLGWLYFKGGLLVSA*NQPGLS Trigger: ACTGAGCCCAGGTTGATTTCAGGCGGACACCAATAG...CCCGCCCTTGAAGTATAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR TCA 90 bp | CCACACAAAGAAGGAGGGGGCTTGGGTGGTAGCACTGGACATCCATCCCATGTGGGCACCAGAAGTGGTTaGCTGCAAAGGCGATTGCAA | + |
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Preference number: 4 (lower is better) Translates to: PHKEGGGLGGSTGHPSHVGTRSG*LQRRLQ Trigger: TTGCAATCGCCTTTGCAGTCAACCACTTCTGGTGCC...CACATGGGATGGATGTCCAGTGCTACCACCCAAGCCCCCTCCTTCTTTGTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR GCA 90 bp | TTGGGTGGTAGCACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGACTGCAAAGGCGATTaGAACGAGGACCAGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: LGGSTGHPSHVPGSLGVGDCKGD*NEDQEH Trigger: GTGTTCCTGGTCCTCGTTGCAATCGCCTTTGCAGTC...TCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCACCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR GCA 90 bp | ACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGCCACAGAGAAGCCAGAAGTGGTTGACTaGAAAGGCGATTGCAACGAG | + |
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Preference number: 4 (lower is better) Translates to: TGHPSHVPGSLGVGATEKPEVVD*KGDCNE Trigger: CTCGTTGCAATCGCCTTTGCAGTCAACCACTTCTGG...CTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CCA 90 bp | ACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGCCACAGAGAAGTCCTGGCACCAGAAGTaGTTGACTGCAAAGGCGATT | + |
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Preference number: 4 (lower is better) Translates to: TGHPSHVPGSLGVGATEKSWHQK*LTAKAI Trigger: AATCGCCTTTGCAGTCAACCACTTCTGGTGCCAGGA...CTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CCA 90 bp | CCACACAAAGAAGGAGGGGGCTTGGGTGGTAGCACTGGACATCCATCCCATGTGTGCTGTGGAGTCTATTaGTGTCCGCCTGAAATCAAC | + |
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Preference number: 4 (lower is better) Translates to: PHKEGGGLGGSTGHPSHVCCGVY*CPPEIN Trigger: GTTGATTTCAGGCGGACACCAATAGACTCCACAGCA...CACATGGGATGGATGTCCAGTGCTACCACCCAAGCCCCCTCCTTCTTTGTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR GCA 90 bp | TTGGGTGGTAGCACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGAGTCAGCCCACTATTaGAGATTCCACACAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LGGSTGHPSHVPGSLGVGESAHY*RFHTKK Trigger: CTTCTTTGTGTGGAATCTGCAATAGTGGGCTGACTC...TCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCACCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS GCA 90 bp | TTCTCACAAGCCCGAAGGCTAGCAACTGCCCTTCCCAGAGCTGTGTaGAACAGGGCATGTCAGCCGCGGCTACTGGCCCCACCCATGGGG | + |
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Preference number: 5 (lower is better) Translates to: FSQARRLATALPRAV*NRACQPRLLAPPMG Trigger: CCCCATGGGTGGGGCCAGTAGCCGCGGCTGACATGCCCTGTTGCACACAGCTCTGGGAAGGGCAGTTGCTAGCCTTCGGGCTTGTGAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491793.1 |
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| CDS CCA 90 bp | GCAGCAGCTCCTAGCCTTGCTTCTGGCCGCCGGTGTCTGGGCTCCTaGAGCTGCTGTGGAGTCTATTGGTGTCCGCCTAGTCCCAGTTCG | + |
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Preference number: 5 (lower is better) Translates to: AAAPSLASGRRCLGS*SCCGVYWCPPSPSS Trigger: CGAACTGGGACTAGGCGGACACCAATAGACTCCACAGCAGCTCCAGGAGCCCAGACACCGGCGGCCAGAAGCAAGGCTAGGAGCTGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371885.1 |
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| CDS-3UTR CAA 90 bp | GAGGGGGCTTGGGTGGTAGCACTGGACATCCATCCCATGTGCCTGGGAGTCTTGCAGCAGCTCCTAGCCTaGCTTCTGGCCGCCGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: EGAWVVALDIHPMCLGVLQQLLA*LLAAGV Trigger: GACACCGGCGGCCAGAAGCAAGGCTAGGAGCTGCTG...CAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCACCCAAGCCCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS CCA 90 bp | ACATGGCTGCAGCAGCTCCTAGCCTTGCTTCTGGCCGCCGGTGTCTaGGCTCCTGGAGCTGCTGTGGAGTCTATTGGTGTCCGCCTAGTC | + |
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Preference number: 5 (lower is better) Translates to: TWLQQLLALLLAAGV*APGAAVESIGVRLV Trigger: GACTAGGCGGACACCAATAGACTCCACAGCAGCTCCAGGAGCCCAGACACCGGCGGCCAGAAGCAAGGCTAGGAGCTGCTGCAGCCATGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371885.1 |
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| CDS-3UTR CAA 90 bp | ACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGCCACAGAGAAGGGGGTGCTGCGGACCTaGCCTTCCTCCTCGGGCACA | + |
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Preference number: 5 (lower is better) Translates to: TGHPSHVPGSLGVGATEKGVLRT*PSSSGT Trigger: TGTGCCCGAGGAGGAAGGCAAGGTCCGCAGCACCCC...CTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS TCA 90 bp | GGATCATGTGTGCAGGCTCCGGCTCCTCCTGGCACCAGAAGTGGTTaGCTGCAAAGGCGATTGCAACGAGGACCAGGAACACGGCCACCG | + |
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Preference number: 5 (lower is better) Translates to: GSCVQAPAPPGTRSG*LQRRLQRGPGTRPP Trigger: CGGTGGCCGTGTTCCTGGTCCTCGTTGCAATCGCCTTTGCAGTCAACCACTTCTGGTGCCAGGAGGAGCCGGAGCCTGCACACATGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294338.7 ENST00000371885.1 |
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| CDS GCA 90 bp | GCTCCTAGCCTTGCTTCTGGCCGCCGGTGTCTGGGCTCCTGGAGCTaGTGTGGAGTCTATTGGTGTCCGCCTGAAATCAACCTGGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: APSLASGRRCLGSWS*CGVYWCPPEINLGS Trigger: TGAGCCCAGGTTGATTTCAGGCGGACACCAATAGACTCCACAGCAGCTCCAGGAGCCCAGACACCGGCGGCCAGAAGCAAGGCTAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS GCA 90 bp | CTCCGGCTCCTCCTGGCACCAGAAGTGGTTGACTGCAAAGGCGATTaGAACGAGGACCAGGAACACGGCCACCGCGATAAGGCCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: LRLLLAPEVVDCKGD*NEDQEHGHRDKALH Trigger: ATGCAGGGCCTTATCGCGGTGGCCGTGTTCCTGGTCCTCGTTGCAATCGCCTTTGCAGTCAACCACTTCTGGTGCCAGGAGGAGCCGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294338.7 ENST00000371885.1 |
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| CDS GCA 90 bp | CATGTGTGCAGGCTCCGGCTCCTCCTGGCACCAGAAGTGGTTGACTaGAAAGGCGATTGCAACGAGGACCAGGAACACGGCCACCGCGAT | + |
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Preference number: 5 (lower is better) Translates to: HVCRLRLLLAPEVVD*KGDCNEDQEHGHRD Trigger: ATCGCGGTGGCCGTGTTCCTGGTCCTCGTTGCAATCGCCTTTGCAGTCAACCACTTCTGGTGCCAGGAGGAGCCGGAGCCTGCACACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294338.7 ENST00000371885.1 |
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| CDS GCA 90 bp | GCTCCTAGCCTTGCTTCTGGCCGCCGGTGTCTGGGCTCCTGGAGCTaGTGTGGAGTCTATTGGTGTCCGCCTAGTCCCAGTTCGGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: APSLASGRRCLGSWS*CGVYWCPPSPSSVL Trigger: AAGAACCGAACTGGGACTAGGCGGACACCAATAGACTCCACAGCAGCTCCAGGAGCCCAGACACCGGCGGCCAGAAGCAAGGCTAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371885.1 |
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| CDS CCA 90 bp | GCAGCAGCTCCTAGCCTTGCTTCTGGCCGCCGGTGTCTGGGCTCCTaGAGCTGCTGTGGAGTCTATTGGTGTCCGCCTGAAATCAACCTG | + |
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Preference number: 5 (lower is better) Translates to: AAAPSLASGRRCLGS*SCCGVYWCPPEINL Trigger: CAGGTTGATTTCAGGCGGACACCAATAGACTCCACAGCAGCTCCAGGAGCCCAGACACCGGCGGCCAGAAGCAAGGCTAGGAGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS CCA 90 bp | ACATGGCTGCAGCAGCTCCTAGCCTTGCTTCTGGCCGCCGGTGTCTaGGCTCCTGGAGCTGCTGTGGAGTCTATTGGTGTCCGCCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: TWLQQLLALLLAAGV*APGAAVESIGVRLK Trigger: TTTCAGGCGGACACCAATAGACTCCACAGCAGCTCCAGGAGCCCAGACACCGGCGGCCAGAAGCAAGGCTAGGAGCTGCTGCAGCCATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS CCA 90 bp | GTCAGGATCATGTGTGCAGGCTCCGGCTCCTCCTGGCACCAGAAGTaGTTGACTGCAAAGGCGATTGCAACGAGGACCAGGAACACGGCC | + |
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Preference number: 5 (lower is better) Translates to: VRIMCAGSGSSWHQK*LTAKAIATRTRNTA Trigger: GGCCGTGTTCCTGGTCCTCGTTGCAATCGCCTTTGCAGTCAACCACTTCTGGTGCCAGGAGGAGCCGGAGCCTGCACACATGATCCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294338.7 ENST00000371885.1 |
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| CDS-3UTR CAA 90 bp | ACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGCCACAGAGAAGAAGGTTCCCCAGGCCTaGCTGACAGCTGGCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: TGHPSHVPGSLGVGATEKKVPQA*LTAGRW Trigger: CCACCTGCCAGCTGTCAGCAAGGCCTGGGGAACCTT...CTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CAA 90 bp | GCCACAGCCGAGCCCCAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTACTGGGAGTCTTGGGGTaGGAGCCACAGAGAAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: ATAEPQPRHGLSSNLGWLLGVLG*EPQRRL Trigger: TAACCTTCTCTGTGGCTCCAACCCCAAGACTCCCAG...TAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS GCA 90 bp | CCTGGGAGTCTTGGGGTTGGAGCCACAGAGAAGGTTACATCGGGGTaGTGCGGACCTTGCCTTCCTCCTCGGGCACATTCTCATAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: PGSLGVGATEKVTSG*CGPCLPPRAHSHRH Trigger: ATGCCTATGAGAATGTGCCCGAGGAGGAAGGCAAGGTCCGCAGCACCCCGATGTAACCTTCTCTGTGGCTCCAACCCCAAGACTCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000294338.7 ENST00000489919.1 ENST00000491793.1 |
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| CDS GCA 90 bp | CACCAGGACTCCATCTGCCTTGTTTCCGACGGTCAGGATCATGTGTaGAGGCTCCCTGGGGATGGGATTCATCAGTGGGGCTCCTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: HQDSICLVSDGQDHV*RLPGDGIHQWGSSV Trigger: CACTGAGGAGCCCCACTGATGAATCCCATCCCCAGGGAGCCTGCACACATGATCCTGACCGTCGGAAACAAGGCAGATGGAGTCCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491793.1 |
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| CDS-3UTR CAA 90 bp | GAGGGGGCTTGGGTGGTAGCACTGGACATCCATCCCATGTGCCTGGGAGTCTTGAGGACTCCATCTGCCTaGTTTCCGACGGTCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: EGAWVVALDIHPMCLGVLRTPSA*FPTVRI Trigger: GATCCTGACCGTCGGAAACAAGGCAGATGGAGTCCT...CAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCACCCAAGCCCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS GCA 90 bp | CGCCATCGAAGAGTACCTTCCATCTGTTCCCACCAGGACTCCATCTaGCTTGTTTCCGACGGTCAGGATCATGTGTGCAGGCTCCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: RHRRVPSICSHQDSI*LVSDGQDHVCRLRL Trigger: GAGCCGGAGCCTGCACACATGATCCTGACCGTCGGAAACAAGGCAGATGGAGTCCTGGTGGGAACAGATGGAAGGTACTCTTCGATGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294338.7 ENST00000371885.1 |
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| CDS GCA 90 bp | GGGGTTGGAGCCACAGAGAAGGTTACATCGGGGTGCTGCGGACCTTaGCTTCCTCCTCGGGCACATTCTCATAGGCATTCTCATGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: GVGATEKVTSGCCGP*LPPRAHSHRHSHAH Trigger: GTGAGCATGAGAATGCCTATGAGAATGTGCCCGAGGAGGAAGGCAAGGTCCGCAGCACCCCGATGTAACCTTCTCTGTGGCTCCAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000294338.7 ENST00000489919.1 ENST00000491793.1 |
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| CDS GCA 90 bp | GGGAGTCTTGGGGTTGGAGCCACAGAGAAGGTTACATCGGGGTGCTaGGGACCTTGCCTTCCTCCTCGGGCACATTCTCATAGGCATTCT | + |
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Preference number: 5 (lower is better) Translates to: GSLGVGATEKVTSGC*GPCLPPRAHSHRHS Trigger: AGAATGCCTATGAGAATGTGCCCGAGGAGGAAGGCAAGGTCCGCAGCACCCCGATGTAACCTTCTCTGTGGCTCCAACCCCAAGACTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000294338.7 ENST00000489919.1 ENST00000491793.1 |
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| CDS GCA 90 bp | AAGAAGGAGGGGGCTTGGGTGGTAGCACTGGACATCCATCCCATGTaGCTGGGAGTCTTGGGGTTGGAGCCACAGAGAAGGTTACATCGG | + |
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Preference number: 5 (lower is better) Translates to: KKEGAWVVALDIHPM*LGVLGLEPQRRLHR Trigger: CCGATGTAACCTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCACCCAAGCCCCCTCCTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000294338.7 ENST00000489919.1 ENST00000491793.1 |
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| CDS GCA 90 bp | CGCCATCGAAGAGTACCTTCCATCTGTTCCCACCAGGACTCCATCTaGCTTGTTTCCGACGGTCAGGATCATGTGTGCAGGCTCCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: RHRRVPSICSHQDSI*LVSDGQDHVCRLPG Trigger: CCCAGGGAGCCTGCACACATGATCCTGACCGTCGGAAACAAGGCAGATGGAGTCCTGGTGGGAACAGATGGAAGGTACTCTTCGATGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491793.1 |
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| CDS GCA 90 bp | CGCCATCGAAGAGTACCTTCCATCTGTTCCCACCAGGACTCCATCTaGCTTGTTTCCGACGGTCAGGATCATGTGTGCAGGCTCCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: RHRRVPSICSHQDSI*LVSDGQDHVCRLPC Trigger: GCAAGGGAGCCTGCACACATGATCCTGACCGTCGGAAACAAGGCAGATGGAGTCCTGGTGGGAACAGATGGAAGGTACTCTTCGATGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489919.1 |
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| CDS CCA 90 bp | CCTAGTCCCAGTTCGGTTCTTCCTCTTGGCCCCAGATGTGGTCCCTaGAAACCGGGCAGGGCCTCAAAACAAGATACAGCCTTGGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: PSPSSVLPLGPRCGP*KPGRASKQDTALVR Trigger: TCTGACCAAGGCTGTATCTTGTTTTGAGGCCCTGCCCGGTTTCCAGGGACCACATCTGGGGCCAAGAGGAAGAACCGAACTGGGACTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371885.1 |
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| CDS-3UTR CAA 90 bp | ACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGAGCCACAGAGAAGAAAGAAGGAGGGGGCTaGGGTGGTAGCACTGGACAT | + |
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Preference number: 5 (lower is better) Translates to: TGHPSHVPGSLGVGATEKKEGGG*GGSTGH Trigger: ATGTCCAGTGCTACCACCCAAGCCCCCTCCTTCTTT...CTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CAA 90 bp | GCCACAGCCGAGCCCCAACCTAGACACGGTCTGAGCTCCAACCTTGGCTGGCTAGGAGTCAGCCCACTATaGCAGATTCCACACAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ATAEPQPRHGLSSNLGWLGVSPL*QIPHKE Trigger: TTCTTTGTGTGGAATCTGCAATAGTGGGCTGACTCC...TAGCCAGCCAAGGTTGGAGCTCAGACCGTGTCTAGGTTGGGGCTCGGCTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS-3UTR CAA 90 bp | TTGGGTGGTAGCACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTTGGATGGCACCAGAAGTGGTaGACTGCAAAGGCGATTGCA | + |
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Preference number: 5 (lower is better) Translates to: LGGSTGHPSHVPGSLGVGWHQKW*TAKAIA Trigger: TGCAATCGCCTTTGCAGTCAACCACTTCTGGTGCCA...TCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCACCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS CCA 72 bp | ACAGGGCATGTCAGCCGCGGCTACTGGCCCCACCCATaGGGTCTCTCACTTTCTCCCCACTCCATAGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: TGHVSRGYWPHP*GLSLSPHSIVG Trigger: CCCCACTATGGAGTGGGGAGAAAGTGAGAGACCCCATGGGTGGGGCCAGTAGCCGCGGCTGACATGCCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491793.1 |
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| CDS GCA 72 bp | CTTGCTTCTGGCCGCCGGTGTCTGGGCTCCTGGAGCTaGTGTGGAGTCTATTGGTGTCCGCCTAGTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LASGRRCLGSWS*CGVYWCPPSPS Trigger: ACTGGGACTAGGCGGACACCAATAGACTCCACAGCAGCTCCAGGAGCCCAGACACCGGCGGCCAGAAGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371885.1 |
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| CDS CCA 72 bp | CAGCAGCTCCTAGCCTTGCTTCTGGCCGCCGGTGTCTaGGCTCCTGGAGCTGCTGTGGAGTCTATTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: QQLLALLLAAGV*APGAAVESIGV Trigger: GACACCAATAGACTCCACAGCAGCTCCAGGAGCCCAGACACCGGCGGCCAGAAGCAAGGCTAGGAGCTGCTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294338.7 ENST00000371885.1 |
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| CDS CAA 90 bp | AGGATCATGTGTGCAGGCTCCGGCTCCTCCTGGCACCAGAAGTGGTaGACTGCAAAGGCGATTGCAACGAGGACCAGGAACACGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: RIMCAGSGSSWHQKW*TAKAIATRTRNTAT Trigger: GGTGGCCGTGTTCCTGGTCCTCGTTGCAATCGCCTTTGCAGTCAACCACTTCTGGTGCCAGGAGGAGCCGGAGCCTGCACACATGATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294338.7 ENST00000371885.1 |
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| CDS CAA 90 bp | GTGGTAGCACTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTaGGAGCCACAGAGAAGGTTACATCGGGGTGCTGCGGACCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: VVALDIHPMCLGVLG*EPQRRLHRGAADLA Trigger: GGCAAGGTCCGCAGCACCCCGATGTAACCTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAGTGCTACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000294338.7 ENST00000489919.1 ENST00000491793.1 |
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| CDS GCA 72 bp | CTTGCTTCTGGCCGCCGGTGTCTGGGCTCCTGGAGCTaGTGTGGAGTCTATTGGTGTCCGCCTGAAATCAAC | + |
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Preference number: 6 (lower is better) Translates to: LASGRRCLGSWS*CGVYWCPPEIN Trigger: GTTGATTTCAGGCGGACACCAATAGACTCCACAGCAGCTCCAGGAGCCCAGACACCGGCGGCCAGAAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294338.7 |
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| CDS GCA 72 bp | GGGGTTGGAGCCACAGAGAAGGTTACATCGGGGTGCTaGGGACCTTGCCTTCCTCCTCGGGCACATTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GVGATEKVTSGC*GPCLPPRAHSH Trigger: ATGAGAATGTGCCCGAGGAGGAAGGCAAGGTCCGCAGCACCCCGATGTAACCTTCTCTGTGGCTCCAACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000294338.7 ENST00000489919.1 ENST00000491793.1 |
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| CDS GCA 72 bp | CTTGGGGTTGGAGCCACAGAGAAGGTTACATCGGGGTaGTGCGGACCTTGCCTTCCTCCTCGGGCACATTCT | + |
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Preference number: 6 (lower is better) Translates to: LGVGATEKVTSG*CGPCLPPRAHS Trigger: AGAATGTGCCCGAGGAGGAAGGCAAGGTCCGCAGCACCCCGATGTAACCTTCTCTGTGGCTCCAACCCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000294338.7 ENST00000489919.1 ENST00000491793.1 |
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| CDS CCA 72 bp | TGTTTCCGACGGTCAGGATCATGTGTGCAGGCTCCCTaGGGATGGGATTCATCAGTGGGGCTCCTCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: CFRRSGSCVQAP*GWDSSVGLLSG Trigger: CCCACTGAGGAGCCCCACTGATGAATCCCATCCCCAGGGAGCCTGCACACATGATCCTGACCGTCGGAAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491793.1 |
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| CDS CAA 72 bp | CTGGACATCCATCCCATGTGCCTGGGAGTCTTGGGGTaGGAGCCACAGAGAAGGTTACATCGGGGTGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LDIHPMCLGVLG*EPQRRLHRGAA Trigger: CGCAGCACCCCGATGTAACCTTCTCTGTGGCTCCAACCCCAAGACTCCCAGGCACATGGGATGGATGTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000294338.7 ENST00000489919.1 ENST00000491793.1 |
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| CDS CAA 90 bp | GTGGAGTCTATTGGTGTCCGCCTAGTCCCAGTTCGGTTCTTCCTCTaGGCCCCAGATGTGGTCCCTGGAAACCGGGCAGGGCCTCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: VESIGVRLVPVRFFL*APDVVPGNRAGPQN Trigger: GTTTTGAGGCCCTGCCCGGTTTCCAGGGACCACATCTGGGGCCAAGAGGAAGAACCGAACTGGGACTAGGCGGACACCAATAGACTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371885.1 |
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| CDS GCA 72 bp | CTCCTGGCACCAGAAGTGGTTGACTGCAAAGGCGATTaGAACGAGGACCAGGAACACGGCCACCGCGATAAG | + |
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Preference number: 6 (lower is better) Translates to: LLAPEVVDCKGD*NEDQEHGHRDK Trigger: CTTATCGCGGTGGCCGTGTTCCTGGTCCTCGTTGCAATCGCCTTTGCAGTCAACCACTTCTGGTGCCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294338.7 ENST00000371885.1 |
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| CDS GCA 72 bp | TCCATCTGCCTTGTTTCCGACGGTCAGGATCATGTGTaGAGGCTCCCTGGGGATGGGATTCATCAGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: SICLVSDGQDHV*RLPGDGIHQWG Trigger: GCCCCACTGATGAATCCCATCCCCAGGGAGCCTGCACACATGATCCTGACCGTCGGAAACAAGGCAGATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491793.1 |
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| CDS GCA 72 bp | GCCACAGAGAAGGTTACATCGGGGTGCTGCGGACCTTaGCTTCCTCCTCGGGCACATTCTCATAGGCATTCT | + |
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Preference number: 6 (lower is better) Translates to: ATEKVTSGCCGP*LPPRAHSHRHS Trigger: AGAATGCCTATGAGAATGTGCCCGAGGAGGAAGGCAAGGTCCGCAGCACCCCGATGTAACCTTCTCTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000294338.7 ENST00000489919.1 ENST00000491793.1 |
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| CDS CCA 72 bp | AGTTCGGTTCTTCCTCTTGGCCCCAGATGTGGTCCCTaGAAACCGGGCAGGGCCTCAAAACAAGATACAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSVLPLGPRCGP*KPGRASKQDTA Trigger: GGCTGTATCTTGTTTTGAGGCCCTGCCCGGTTTCCAGGGACCACATCTGGGGCCAAGAGGAAGAACCGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371885.1 |
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| CDS CCA 72 bp | GGAAACCGGGCAGGGCCTCAAAACAAGATACAGCCTTaGTCAGAGGCTTCAACACCCAACTTCAGATCCATC | + |
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Preference number: 6 (lower is better) Translates to: GNRAGPQNKIQP*SEASTPNFRSI Trigger: GATGGATCTGAAGTTGGGTGTTGAAGCCTCTGACCAAGGCTGTATCTTGTTTTGAGGCCCTGCCCGGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371885.1 |
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| CDS CAA 72 bp | TGGAAACCGGGCAGGGCCTCAAAACAAGATACAGCCTaGGTCAGAGGCTTCAACACCCAACTTCAGATCCAT | + |
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Preference number: 6 (lower is better) Translates to: WKPGRASKQDTA*VRGFNTQLQIH Trigger: ATGGATCTGAAGTTGGGTGTTGAAGCCTCTGACCAAGGCTGTATCTTGTTTTGAGGCCCTGCCCGGTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371885.1 |
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