RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDZD8 (Homo sapiens)

Ensembl gene IDs: ENSG00000165650

Ensembl transcript IDs: ENST00000334464.7, ENST00000482496.5, ENST00000489302.5, ENST00000489491.1

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTTTATTGCAATTTTATTTTTGCCTTTACGGCTCTGTGTCTTTCTaGAAGAAGGCCTGGCAAAGGTATGCCTGCTGTTGGTCCCTCGGG +
Preference number: 1 (lower is better)
Translates to: TLLQFYFCLYGSVSF*KKAWQRYACCWSLG
Trigger: CCCGAGGGACCAACAGCAGGCATACCTTTGCCAGGCCTTCTTGCAGAAAGACACAGAGCCGTAAAGGCAAAAATAAAATTGCAATAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CCA 90 bp AACTCACTTATTTGGCATTGGGCAACTTGGCCAAGTCTGCCACTTTaGAAGATGGCTCTGGAGGAAACTCTCATATGGCTAAAAAGGCAG +
Preference number: 1 (lower is better)
Translates to: NSLIWHWATWPSLPL*KMALEETLIWLKRQ
Trigger: CTGCCTTTTTAGCCATATGAGAGTTTCCTCCAGAGCCATCTTCCAAAGTGGCAGACTTGGCCAAGTTGCCCAATGCCAAATAAGTGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR TCA 90 bp TTCCCTCAGTCAAATGTTACTGGGACCCGTAAAATGGACCCAGTGTaGGTATATCTTCATTTTCAGAGAACTGGTCCCAATTCCTATGTA +
Preference number: 1 (lower is better)
Translates to: FPQSNVTGTRKMDPV*VYLHFQRTGPNSYV
Trigger: TACATAGGAATTGGGACCAGTTCTCTGAAAATGAAGATATACTCACACTGGGTCCATTTTACGGGTCCCAGTAACATTTGACTGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR GCA 90 bp AAGCTTTTCTGTGGGGCTTCGATTATTTCAAGTCTGGTTTCTAAGTaGAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGC +
Preference number: 1 (lower is better)
Translates to: KLFCGASIISSLVSK*SVFEANELPTHLFG
Trigger: GCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTTAGAAACCAGACTTGAAATAATCGAAGCCCCACAGAAAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR TCA 90 bp ACACAACTCATCCAGAACTGTCTTAGTCATACCATCCATCCCTGGTaGAAGAGTAAAACCAAAGGTTATTATTTCCTTTCCATGGTTATG +
Preference number: 1 (lower is better)
Translates to: TQLIQNCLSHTIHPW*KSKTKGYYFLSMVM
Trigger: CATAACCATGGAAAGGAAATAATAACCTTTGGTTTTACTCTTTCACCAGGGATGGATGGTATGACTAAGACAGTTCTGGATGAGTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR GCA 90 bp CAGTGTGCAGTGTTGTGTATTTTTCTAAGCATGACAACATTGATGTaGCTTTTCAGTGTAACAGCAAATACTGTTAGTGAACATTGTCAA +
Preference number: 1 (lower is better)
Translates to: QCAVLCIFLSMTTLM*LFSVTANTVSEHCQ
Trigger: TTGACAATGTTCACTAACAGTATTTGCTGTTACACTGAAAAGGCACATCAATGTTGTCATGCTTAGAAAAATACACAACACTGCACACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR TCA 90 bp GCTTTCCCTTTAAGATGCATACTTGTCTTACTGGATGAAGAAAATTaGGGGTACATGTACCTTATACTGTCAAGGTTGTTTAAACATGAT +
Preference number: 1 (lower is better)
Translates to: AFPLRCILVLLDEEN*GYMYLILSRLFKHD
Trigger: ATCATGTTTAAACAACCTTGACAGTATAAGGTACATGTACCCTCAATTTTCTTCATCCAGTAAGACAAGTATGCATCTTAAAGGGAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR TCA 90 bp TCAAAAATCATCAAAGTGTTTAATTGTATAAAACAGTGTTTCCAGTaGCACAACTCATCCAGAACTGTCTTAGTCATACCATCCATCCCT +
Preference number: 1 (lower is better)
Translates to: SKIIKVFNCIKQCFQ*HNSSRTVLVIPSIP
Trigger: AGGGATGGATGGTATGACTAAGACAGTTCTGGATGAGTTGTGTCACTGGAAACACTGTTTTATACAATTAAACACTTTGATGATTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR GCA 90 bp CTGGAGTGTGCAGTGTGGAATGTCTCTAATACTACTTGTGAATCCTaGAGTTCTATAATCATAAACAAAAATTACTTAGTTTCGTTAAGC +
Preference number: 1 (lower is better)
Translates to: LECAVWNVSNTTCES*SSIIINKNYLVSLS
Trigger: GCTTAACGAAACTAAGTAATTTTTGTTTATGATTATAGAACTGCAGGATTCACAAGTAGTATTAGAGACATTCCACACTGCACACTCCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CAA 90 bp CAACTCACTTATTTGGCATTGGGCAACTTGGCCAAGTCTGCCACTTaGGAAGATGGCTCTGGAGGAAACTCTCATATGGCTAAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: QLTYLALGNLAKSAT*EDGSGGNSHMAKKA
Trigger: TGCCTTTTTAGCCATATGAGAGTTTCCTCCAGAGCCATCTTCCAAAGTGGCAGACTTGGCCAAGTTGCCCAATGCCAAATAAGTGAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CAA 90 bp TTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCAACTaGGCCAAGTCTGCCACTTTGGAAGATGGCTCTGGAGGAAACTCT +
Preference number: 2 (lower is better)
Translates to: LKQTNFQLTYLALGN*AKSATLEDGSGGNS
Trigger: AGAGTTTCCTCCAGAGCCATCTTCCAAAGTGGCAGACTTGGCCAAGTTGCCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CAA 90 bp CTAAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTaGGCATTGGGCAACTTGGCCAAGTCTGCCACTTTGGAAGATGGC +
Preference number: 2 (lower is better)
Translates to: LSAVCLKQTNFQLTY*ALGNLAKSATLEDG
Trigger: GCCATCTTCCAAAGTGGCAGACTTGGCCAAGTTGCCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGGCTCTGTGTCTTTCTaGAAGAAGGCCTGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGGSVSF*KKAWQR
Trigger: CCTTTGCCAGGCCTTCTTGCAGAAAGACACAGAGCC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAACCTGTTCCCTCAGTaGTTGCTGTTGTCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVNLFPQ*LLLSVW
Trigger: CCAAACTGACAACAGCAATCACTGAGGGAACAGGTT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCCATGGGTATCTTCCTaGGGTGAAAGTCCACATCTT +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGPWVSS*GESPHL
Trigger: AAGATGTGGACTTTCACCGCAGGAAGATACCCATGG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACTGGGACCCGTAAAATaGACCCAGTGTGAGTATATC +
Preference number: 2 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLGPVK*TQCEYI
Trigger: GATATACTCACACTGGGTCCATTTTACGGGTCCCAG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTGTTCCCTCAGTGATTaGTGTTGTCAGTTTGGGCAT +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGCSLSD*CCQFGH
Trigger: ATGCCCAAACTGACAACAGCAATCACTGAGGGAACA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGTTTCTGGTTCTCCCTaGCCCCAATACCATATACTT +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGVSGSP*PQYHIL
Trigger: AAGTATATGGTATTGGGGGCAGGGAGAACCAGAAAC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTTTGGAAGATGGCTCTaGAGGAAACTCTCATATGGC +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGFGRWL*RKLSYG
Trigger: GCCATATGAGAGTTTCCTCCAGAGCCATCTTCCAAA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGGGTCCTTTTGTAACTaGCTATGCTTACACAGTTCA +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGGSFCN*LCLHSS
Trigger: TGAACTGTGTAAGCATAGGCAGTTACAAAAGGACCC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGAGGAAACTCTCATATaGCTAAAAAGGCAGGCTAGT +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGEETLI*LKRQAS
Trigger: ACTAGCCTGCCTTTTTAGCCATATGAGAGTTTCCTC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTCTGTGGTACTTTAGATaGAACTTTACCCTGTTCATT +
Preference number: 2 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVLWYFR*NFTLFI
Trigger: AATGAACAGGGTAAAGTTGCATCTAAAGTACCACAG...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGCACTTTTGCAGTTATaGTATTGTTTCCCTCACAAC +
Preference number: 2 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVALLQL*YCFPHN
Trigger: GTTGTGAGGGAAACAATAGCATAACTGCAAAAGTGC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCTGATACATTTTGAATaGTGTGCCCATGGGTATCTT +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGLIHFE*CAHGYL
Trigger: AAGATACCCATGGGCACACCATTCAAAATGTATCAG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAAAATGGACCCAGTGTaGGTATATCTTCATTTTCAG +
Preference number: 2 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVKMDPV*VYLHFQ
Trigger: CTGAAAATGAAGATATACTCACACTGGGTCCATTTT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCATGCTTGGGTATCATaGAAACTTCCATGGTTTAAT +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGHAWVS*KLPWFN
Trigger: ATTAAACCATGGAAGTTTTCATGATACCCAAGCATG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTTGTCAGTTTGGGCATaGAGCAAATTTGTTATAACC +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGLSVWA*SKFVIT
Trigger: GGTTATAACAAATTTGCTGCATGCCCAAACTGACAA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATCAGTTTCAGCAACATaGTTGGGTATCATGAAAACT +
Preference number: 2 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVSVSAT*LGIMKT
Trigger: AGTTTTCATGATACCCAAGCATGTTGCTGAAACTGA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGAACAGCTCTTTCAAATaGATCAGTTTCAGCAACATG +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGNSSFK*ISFSNM
Trigger: CATGTTGCTGAAACTGATGCATTTGAAAGAGCTGTT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGAAGTGGACTTTGTTATaGTTTTCTGCATGGCCAAAT +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGKWTLL*FSAWPN
Trigger: ATTTGGCCATGCAGAAAAGCATAACAAAGTCCACTT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATCATTTTCAGAGAACTaGTCCCAATTCCTATGTATG +
Preference number: 2 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVSFSEN*SQFLCM
Trigger: CATACATAGGAATTGGGACCAGTTCTCTGAAAATGA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAAATACCCTTTCACATaGTTTATTTCCTATGGGAGA +
Preference number: 2 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVKYPFT*FISYGR
Trigger: TCTCCCATAGGAAATAAAGCATGTGAAAGGGTATTT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTGTTCAAAGCACTTTTaGAGTTATGCTATTGTTTCC +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGCSKHF*SYAIVS
Trigger: GGAAACAATAGCATAACTGCAAAAGTGCTTTGAACA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGACATGGTTGTATCTGTaGTACTTTAGATGCAACTTT +
Preference number: 2 (lower is better)
Translates to: KCSVFEANELPTHLFGIGTWLYL*YFRCNF
Trigger: AAAGTTGCATCTAAAGTACCACAGATACAACCATGT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CAA 90 bp AAGAAAGATTCAAAACCTGTTCCCTCAGTGATTGCTGTTGTCAGTTaGGGCATGCAGCAAATTTGTTATAACCATGATGGAAATGAAAAT +
Preference number: 2 (lower is better)
Translates to: KKDSKPVPSVIAVVS*GMQQICYNHDGNEN
Trigger: ATTTTCATTTCCATCATGGTTATAACAAATTTGCTGCATGCCCAAACTGACAACAGCAATCACTGAGGGAACAGGTTTTGAATCTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CAA 90 bp ATCATCCAGTGTGCAGTGTTGTGTATTTTTCTAAGCATGACAACATaGATGTGCCTTTTCAGTGTAACAGCAAATACTGTTAGTGAACAT +
Preference number: 2 (lower is better)
Translates to: IIQCAVLCIFLSMTT*MCLFSVTANTVSEH
Trigger: ATGTTCACTAACAGTATTTGCTGTTACACTGAAAAGGCACATCAATGTTGTCATGCTTAGAAAAATACACAACACTGCACACTGGATGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CCA 72 bp TGCCTTTACGGCTCTGTGTCTTTCTGCAAGAAGGCCTaGCAAAGGTATGCCTGCTGTTGGTCCCTCGGGATA +
Preference number: 3 (lower is better)
Translates to: CLYGSVSFCKKA*QRYACCWSLGI
Trigger: TATCCCGAGGGACCAACAGCAGGCATACCTTTGCCAGGCCTTCTTGCAGAAAGACACAGAGCCGTAAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR GCA 72 bp ACTCACTTATTTGGCATTGGGCAACTTGGCCAAGTCTaGCACTTTGGAAGATGGCTCTGGAGGAAACTCTCA +
Preference number: 3 (lower is better)
Translates to: THLFGIGQLGQV*HFGRWLWRKLS
Trigger: TGAGAGTTTCCTCCAGAGCCATCTTCCAAAGTGGCAGACTTGGCCAAGTTGCCCAATGCCAAATAAGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CCA 72 bp ATTTGGCATTGGGCAACTTGGCCAAGTCTGCCACTTTaGAAGATGGCTCTGGAGGAAACTCTCATATGGCTA +
Preference number: 3 (lower is better)
Translates to: IWHWATWPSLPL*KMALEETLIWL
Trigger: TAGCCATATGAGAGTTTCCTCCAGAGCCATCTTCCAAAGTGGCAGACTTGGCCAAGTTGCCCAATGCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTATACTCTAGGCTATTaGGAGTGTTCCCCCACTTGC +
Preference number: 3 (lower is better)
Translates to: KCSVFEANELPTHLFGIGYTLGY*ECSPTC
Trigger: GCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR GCA 72 bp TGTGGGGCTTCGATTATTTCAAGTCTGGTTTCTAAGTaGAGTGTGTTTGAAGCAAACGAACTTCCAACTCAC +
Preference number: 3 (lower is better)
Translates to: CGASIISSLVSK*SVFEANELPTH
Trigger: GTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTTAGAAACCAGACTTGAAATAATCGAAGCCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR TCA 72 bp TCAAATGTTACTGGGACCCGTAAAATGGACCCAGTGTaGGTATATCTTCATTTTCAGAGAACTGGTCCCAAT +
Preference number: 3 (lower is better)
Translates to: SNVTGTRKMDPV*VYLHFQRTGPN
Trigger: ATTGGGACCAGTTCTCTGAAAATGAAGATATACTCACACTGGGTCCATTTTACGGGTCCCAGTAACATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACTCTCTACAAAATTCTaGACCAACTGCAATCTACAT +
Preference number: 3 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLSTKF*TNCNLH
Trigger: ATGTAGATTGCAGTTGGTCAAGAATTTTGTAGAGAG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTTTGCAGTTATGCTATaGTTTCCCTCACAACAATAC +
Preference number: 3 (lower is better)
Translates to: KCSVFEANELPTHLFGIGFAVML*FPSQQY
Trigger: GTATTGTTGTGAGGGAAACAATAGCATAACTGCAAA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCTGTTCAAAGCACTTTaGCAGTTATGCTATTGTTTC +
Preference number: 3 (lower is better)
Translates to: KCSVFEANELPTHLFGIGLFKAL*QLCYCF
Trigger: GAAACAATAGCATAACTGCAAAAGTGCTTTGAACAG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR GCA 72 bp TCCCATTTTAGAGATGGGTCCTTTTGTAACTGCCTATaGTTACACAGTTCATTAATGGAAGGGCTTGAACTT +
Preference number: 3 (lower is better)
Translates to: SHFRDGSFCNCL*LHSSLMEGLEL
Trigger: AAGTTCAAGCCCTTCCATTAATGAACTGTGTAAGCATAGGCAGTTACAAAAGGACCCATCTCTAAAATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR TCA 72 bp AGCTTTCCCTTTAAGATGCATACTTGTCTTACTGGATaGAGAAAATTGAGGGTACATGTACCTTATACTGTC +
Preference number: 3 (lower is better)
Translates to: SFPFKMHTCLTG*RKLRVHVPYTV
Trigger: GACAGTATAAGGTACATGTACCCTCAATTTTCTTCATCCAGTAAGACAAGTATGCATCTTAAAGGGAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR GCA 72 bp TATTATTCCCATTTTAGAGATGGGTCCTTTTGTAACTaGCTATGCTTACACAGTTCATTAATGGAAGGGCTT +
Preference number: 3 (lower is better)
Translates to: YYSHFRDGSFCN*LCLHSSLMEGL
Trigger: AAGCCCTTCCATTAATGAACTGTGTAAGCATAGGCAGTTACAAAAGGACCCATCTCTAAAATGGGAATAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR GCA 72 bp ACCAAAGTTTTGCATTATTTCAACAGCTCTTTCAAATaGATCAGTTTCAGCAACATGCTTGGGTATCATGAA +
Preference number: 3 (lower is better)
Translates to: TKVLHYFNSSFK*ISFSNMLGYHE
Trigger: TTCATGATACCCAAGCATGTTGCTGAAACTGATGCATTTGAAAGAGCTGTTGAAATAATGCAAAACTTTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR TCA 72 bp TTTCTTAATGAATACTCACTACAGAAGTATTCAGAATaGTCACCATTCCTTTACAACTGTAAGACGCCAAAG +
Preference number: 3 (lower is better)
Translates to: FLNEYSLQKYSE*SPFLYNCKTPK
Trigger: CTTTGGCGTCTTACAGTTGTAAAGGAATGGTGATCATTCTGAATACTTCTGTAGTGAGTATTCATTAAGAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR TCA 72 bp ATCAAAGTGTTTAATTGTATAAAACAGTGTTTCCAGTaGCACAACTCATCCAGAACTGTCTTAGTCATACCA +
Preference number: 3 (lower is better)
Translates to: IKVFNCIKQCFQ*HNSSRTVLVIP
Trigger: TGGTATGACTAAGACAGTTCTGGATGAGTTGTGTCACTGGAAACACTGTTTTATACAATTAAACACTTTGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR GCA 72 bp GTGTTGTGTATTTTTCTAAGCATGACAACATTGATGTaGCTTTTCAGTGTAACAGCAAATACTGTTAGTGAA +
Preference number: 3 (lower is better)
Translates to: VLCIFLSMTTLM*LFSVTANTVSE
Trigger: TTCACTAACAGTATTTGCTGTTACACTGAAAAGGCACATCAATGTTGTCATGCTTAGAAAAATACACAACAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CCA 72 bp GTAAAACCAAAGGTTATTATTTCCTTTCCATGGTTATaGTCGATTGCCAACAGCCTTATAAAGAAAAAGAAG +
Preference number: 3 (lower is better)
Translates to: VKPKVIISFPWL*SIANSLIKKKK
Trigger: CTTCTTTTTCTTTATAAGGCTGTTGGCAATCGACCATAACCATGGAAAGGAAATAATAACCTTTGGTTTTAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGAGGACATCGGGCGGCTaGGTCGGGGCGAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGRTSGG*VGASGS
Trigger: GGAGCCGCTCGCCCCGACCCAGCCGCCCGATGTCCT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCATCGGGCTCCCCGGTaGCCGAGGGCACGACTGGCC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGHRAPR*PRARLA
Trigger: GGCCAGTCGTGCCCTCGGCCACCGGGGAGCCCGATG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGGCCGAGGGCACGACTaGCCGCACGAGCCGGATGGT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGGRGHD*PHEPDG
Trigger: ACCATCCGGCTCGTGCGGCCAGTCGTGCCCTCGGCC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGGCCCGGCACTGGCTTaGTGTAGCGGAAGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGGPALA*CSGSPR
Trigger: GCGAGGGCTTCCGCTACATCAAGCCAGTGCCGGGCC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGGCGCCCGGCCGTCTTaGTCTGCAGCAGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGGARPS*SAAAPR
Trigger: TCGAGGAGCTGCTGCAGACCAAGACGGCCGGGCGCC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTCCAGGTCCACGTCGATaGCCAGGTGGAAGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVPGPRR*PGGSPR
Trigger: ACGGGGGCTTCCACCTGGCCATCGACGTGGACCTGG...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACCGCTGCCTCCATTTTaGGGACATCGGGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVPLPPF*GHRAAG
Trigger: CCCAGCCGCCCGATGTCCTCAAAATGGAGGCAGCGG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAACTGGGCGAGGAGCGTaGGGAAGGAACCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVTGRGA*GRNPAR
Trigger: CCGTGCTGGGTTCCTTCCTCACGCTCCTCGCCCAGT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTCCGGCCGTCTTGGTCTaGAGCAGCTCCTCGAACTCC +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVPAVLV*SSSSNS
Trigger: GGAGTTCGAGGAGCTGCTGCAGACCAAGACGGCCGG...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGAGCAGGCCCGGCACTaGCTTGATGTAGCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVEQARH*LDVAEA
Trigger: GGCTTCCGCTACATCAAGCCAGTGCCGGGCCTGCTC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTACGTCGATGGCCAGGTaGAAGCCCCCGTTGTACTCC +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVTSMAR*KPPLYS
Trigger: GGAGTACAACGGGGGCTTCCACCTGGCCATCGACGT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGGCCGCCCTTCAAACTaGGAGCGCACCTCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGGRPSN*ERTSKS
Trigger: CGACTTCGAGGTGCGCTCCCAGTTTGAAGGGCGGCC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTATGATGGAGGTGAGCTaGGGCATGGGCCGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVMMEVS*GMGRPS
Trigger: TGAAGGGCGGCCCATGCCCCAGCTCACCTCCATCAT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGCGGCTCGGGCTGTCTaGGGTACAGCAGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVAARAV*GTAGRT
Trigger: AGTTCTTCCTGCTGTACCGCAGACAGCCCGAGCCGC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCCACGCGGGACAGCTTaGCAAACAAGTAGGCGGACT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGPRGTA*QTSRRT
Trigger: AGTCCGCCTACTTGTTTGTCAAGCTGTCCCGCGTGG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTACAAGTAGGCGGACTTaGCGAAGACCAGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVTSRRT*RRPGPR
Trigger: ACGTGGACCTGGTCTTCGGCAAGTCCGCCTACTTGT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CAA 72 bp TATTTGGCATTGGGCAACTTGGCCAAGTCTGCCACTTaGGAAGATGGCTCTGGAGGAAACTCTCATATGGCT +
Preference number: 4 (lower is better)
Translates to: YLALGNLAKSAT*EDGSGGNSHMA
Trigger: AGCCATATGAGAGTTTCCTCCAGAGCCATCTTCCAAAGTGGCAGACTTGGCCAAGTTGCCCAATGCCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATGCAGCACTGCACCTTaGTTACTCTGGCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVCSTAP*LLWPTG
Trigger: GCCTGTTGGCCAGAGTAATCAAGGTGCAGTGCTGCA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTACATCTGGTTCTGCCTaGTTTGGAGCATCGGCGGAA +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVTSGSA*FGASAE
Trigger: TTCCGCCGATGCTCCAAATCAGGCAGAACCAGATGT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTGGCTCTGTGTCTTTCTaGAAGAAGGCCTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVGSVSF*KKAWQR
Trigger: CCTTTGCCAGGCCTTCTTGCAGAAAGACACAGAGCC...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGAAGGAGAAGAACCAGTaGGTGAAGGGCACGCGCGTA +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGKEKNQ*VKGTRV
Trigger: TACGCGCGTGCCCTTCACCCACTGGTTCTTCTCCTT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACGCTTGTGGTCGTGGTaGCACAGGTGGTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVRLWSW*HRWFES
Trigger: GCTTTCAAACCACCTGTGCCACCACGACCACAAGCG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAGGAACTTTCGCTTGTaGTCGTGGTGGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVRNFRL*SWWHRW
Trigger: CCACCTGTGCCACCACGACCACAAGCGAAAGTTCCT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAATAGGATGGTGGCGTTaGGGAAGTAGCAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVIGWWR*GSSKSP
Trigger: GGGAGACTTGCTACTTCCTCAACGCCACCATCCTAT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAGTCGATCTCCCCGCTaGAGATCTGCAATTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVSRSPR*RSAIAA
Trigger: TGCTGCAATTGCAGATCTTCAGCGGGGAGATCGACT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTAGGGCAGGAAGTTTCTaGAGTGACATCTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVRAGSF*SDIFGH
Trigger: GTGGCCAAAGATGTCACTTCAGAAACTTCCTGCCCT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGATGATTCCCATGTTTaGCGGTCGTCCGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGDDSHV*RSSELS
Trigger: GGACAGTTCGGACGACCGTCAAACATGGGAATCATC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTCTGAAGATCTGCAATTaGAGCAGGCGAGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVLKICN*SRRVWS
Trigger: GCTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAG...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTCCCCGCTGAAGATCTaGAATTGCAGCAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGSPLKI*NCSRRV
Trigger: AACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAGACCTCCGTGTCACTaGCTTCGTTGTCTGACGTGT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVRPPCH*LRCLTC
Trigger: ACACGTCAGACAACGAAGGCAGTGACACGGAGGTCT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATGGCAAAGGTATGCCTaGTGTTGGTCCCTCGGGATA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVWQRYA*CWSLGI
Trigger: TATCCCGAGGGACCAACAGCAGGCATACCTTTGCCA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTTTCGCTTGTGGTCGTaGTGGCACAGGTGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVFRLWS*WHRWFE
Trigger: TTCAAACCACCTGTGCCACCACGACCACAAGCGAAA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTGGTTCTGCCTGATTTaGAGCATCGGCGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGWFCLI*SIGGRQ
Trigger: TTGCCTTCCGCCGATGCTCCAAATCAGGCAGAACCA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTACACAAGCAAGTAACTaGAGAAGCAGGCCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVTQASN*RSRPEC
Trigger: GCACTCTGGCCTGCTTCTCCAGTTACTTGCTTGTGT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATCTTTTATGGAGTCCTaGAGTCTAGACCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVSFMES*SLDLGP
Trigger: GGGGCCCAGGTCTAGACTCCAGGACTCCATAAAAGA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTCCAAGTCTGCCACTTTaGAAGATGGCTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVPSLPL*KMALEE
Trigger: TTCCTCCAGAGCCATCTTCCAAAGTGGCAGACTTGG...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTAGCATACCCATCAGTTaGCTGGACAAGACGAAGTGT +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVSIPIS*LDKTKC
Trigger: ACACTTCGTCTTGTCCAGTCAACTGATGGGTATGCT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTCCTTGGGTTGGTTTTaGCACTTGTGCTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGSLGWF*HLCWVC
Trigger: ACAGACCCAGCACAAGTGTCAAAACCAACCCAAGGA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGGGTGTGTGTTTTGGTaGAGGTTCTACGAGATCGGT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVGCVFW*RFYEIG
Trigger: ACCGATCTCGTAGAACCTTCACCAAAACACACACCC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTACTCGGTCACCAGCCTaGTTGATAAGCTTCAACACT +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVTRSPA*LISFNT
Trigger: AGTGTTGAAGCTTATCAAGCAGGCTGGTGACCGAGT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGAGAACATCTGGTTCTaGCTGATTTGGAGCATCGGC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGENIWF*LIWSIG
Trigger: GCCGATGCTCCAAATCAGGCAGAACCAGATGTTCTC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTTGCTTAGGTGCAGCTaGATCGTCTATGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGLLRCS*IVYGIH
Trigger: GTGGATGCCATAGACGATGCAGCTGCACCTAAGCAA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACAACTTGGCCAAGTCTaGCACTTTGGAAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVQLGQV*HFGRWL
Trigger: GAGCCATCTTCCAAAGTGGCAGACTTGGCCAAGTTG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTCGTTGTCTGACGTGTTaGGTGTGTGTTTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVRCLTC*VCVLVK
Trigger: CTTCACCAAAACACACACCCAACACGTCAGACAACG...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTTTAGAAGGACTGTTTaGACCACAGACCTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVFRRTV*TTDLRV
Trigger: GACACGGAGGTCTGTGGTCCAAACAGTCCTTCTAAA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTCTGCAAGAAGGCCTaGCAAAGGTATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVFCKKA*QRYACC
Trigger: ACAGCAGGCATACCTTTGCCAGGCCTTCTTGCAGAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTGCCACTTTGGAAGATaGCTCTGGAGGAAACTCTCA +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVCHFGR*LWRKLS
Trigger: TGAGAGTTTCCTCCAGAGCCATCTTCCAAAGTGGCA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CAA 72 bp GTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTaGGCATTGGGCAACTTGGCCAAGTCTGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: VCLKQTNFQLTY*ALGNLAKSATL
Trigger: CAAAGTGGCAGACTTGGCCAAGTTGCCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTCTTGCAGTGTTGATGTaGTTTTCACACCTCCAATGG +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVLAVLM*FSHLQW
Trigger: CCATTGGAGGTGTGAAAATCACATCAACACTGCAAG...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGAACCTGTTCCCTCAGTaGTTGCTGTTGTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGNLFPQ*LLLSVW
Trigger: CCAAACTGACAACAGCAATCACTGAGGGAACAGGTT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTAAAGTGGTTACACACTaGGCAGATTGCCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVKVVTH*ADCLKC
Trigger: ACACTTGAGGCAATCTGCTCAGTGTGTAACCACTTT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGTTATCTTGCAGCACTaGACCTTGATTACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVVILQH*TLITLA
Trigger: GGCCAGAGTAATCAAGGTGCAGTGCTGCAAGATAAC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTTAAATAGACCTGTCTaGTACACAGACTCGGATGGG +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVLNRPV*YTDSDG
Trigger: CCCATCCGAGTCTGTGTAGCAGACAGGTCTATTTAA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTGTTCCCTCAGTGATTaGTGTTGTCAGTTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVCSLSD*CCQFGH
Trigger: ATGCCCAAACTGACAACAGCAATCACTGAGGGAACA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACCATGGGTATCTTCCTaGGGTGAAAGTCCACATCTT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVPWVSS*GESPHL
Trigger: AAGATGTGGACTTTCACCGCAGGAAGATACCCATGG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTGCAGCAGGCGAGTTTaGAGCCACAGTTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGCSRRV*SHSFND
Trigger: ATCATTGAAACTGTGGCTCCAAACTCGCCTGCTGCA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTGTAGTCACACCATGTTaGGTTCTGGAACTGAGTATC +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVVVTPC*VLELSI
Trigger: GATACTCAGTTCCAGAACCCAACATGGTGTGACTAC...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCTGGGACCCGTAAAATaGACCCAGTGTGAGTATATC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGLGPVK*TQCEYI
Trigger: GATATACTCACACTGGGTCCATTTTACGGGTCCCAG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACAACACTTGCAGTGTTaGTGTGATTTTCACACCTCC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVQHLQC*CDFHTS
Trigger: GGAGGTGTGAAAATCACATCAACACTGCAAGTGTTG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTCGGTGGTAGTGGGTaGCTTCCTACAGCTAATTTA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVFGGSG*LPTANL
Trigger: TAAATTAGCTGTAGGAAGTCACCCACTACCACCGAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTTTCCATCTTTGGACTaGATTTTCGGTGGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGFPSLD*IFGGSG
Trigger: CCCACTACCACCGAAAATTCAGTCCAAAGATGGAAA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGGTATCTTCCTGCGGTaGAAGTCCACATCTTTAATC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVGIFLR*KSTSLI
Trigger: GATTAAAGATGTGGACTTTCACCGCAGGAAGATACC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCAAATTGGTTCTCTTTaGGGGTTTCTGGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGQIGSL*GFLVLP
Trigger: AGGGAGAACCAGAAACCCTCAAAGAGAACCAATTTG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTAGCACACATTATCTCTaGGACTCTTCCAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVSTHYL*DSSNKE
Trigger: CTCTTTGTTGGAAGAGTCTCAGAGATAATGTGTGCT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAACCATCCATCCCTGGTaGAAGAGTAAAACCAAAGGT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVTIHPW*KSKTKG
Trigger: ACCTTTGGTTTTACTCTTTCACCAGGGATGGATGGT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGTTTCAATGATGACGTaGCCAGCATACCCATCAGTT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGVSMMT*PAYPSV
Trigger: AACTGATGGGTATGCTGGGCACGTCATCATTGAAAC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGTTTCTGGTTCTCCCTaGCCCCAATACCATATACTT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVVSGSP*PQYHIL
Trigger: AAGTATATGGTATTGGGGGCAGGGAGAACCAGAAAC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGATGATCTTCTTGAGCTaGTTGACGATGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGMIFLS*LTMMEV
Trigger: CACCTCCATCATCGTCAACCAGCTCAAGAAGATCAT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTGCACAAAACATACACTaGGAAGCTGCTTTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVAQNIH*EAALVQ
Trigger: TTGGACTAAAGCAGCTTCCCAGTGTATGTTTTGTGC...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATACGAGATCGGTTCCTaGTTCAGAAAGGCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVYEIGS*FRKASF
Trigger: AAAACTCGCCTTTCTGAACCAGGAACCGATCTCGTA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTATGAACTCTAGTTTCTaGATCCTTTCCTCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVMNSSF*ILSSVG
Trigger: GCCTACAGAGGAAAGGATCCAGAAACTAGAGTTCAT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTTGGAAGATGGCTCTaGAGGAAACTCTCATATGGC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVFGRWL*RKLSYG
Trigger: GCCATATGAGAGTTTCCTCCAGAGCCATCTTCCAAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATCACTTATTTGGCATTaGGCAACTTGGCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVSLIWH*ATWPSL
Trigger: CAGACTTGGCCAAGTTGCCCAATGCCAAATAAGTGA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTGTTAAGAGATATGACTaGAGTGTGCAGTGTGGAATG +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVVKRYD*SVQCGM
Trigger: CATTCCACACTGCACACTCCAGTCATATCTCTTAAC...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTCCTTTCCATGGTTATaGTCGATTGCCAACAGCCTT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGSFPWL*SIANSL
Trigger: AAGGCTGTTGGCAATCGACCATAACCATGGAAAGGA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAACTCAAGTGTGCAATaGACATTTGCCTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVNSSVQ*TFASLS
Trigger: TGACAGAGAGGCAAATGTTCATTGCACACTTGAGTT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAACACGTTTGGGACTATaGCTTAATGATTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVTRLGL*LNDCAS
Trigger: TGAGGCACAATCATTAAGTCATAGTCCCAAACGTGT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAGGAAGTTTCTGAAGTaGCATCTTTGGCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVRKFLK*HLWPLL
Trigger: AAGAAGTGGCCAAAGATGTCACTTCAGAAACTTCCT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGTAGCTTATCCAACATaGACTCTAGTTTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGVAYPT*TLVSGS
Trigger: GGATCCAGAAACTAGAGTTCATGTTGGATAAGCTAC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACATCTGATATGCTGCTaGATGGCTGAGAGTCTATTA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVHLICC*MAESLL
Trigger: TAATAGACTCTCAGCCATTCAGCAGCATATCAGATG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAACTAAAGTACAACTATaGTGTCTCTACTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVTKVQL*CLYCLS
Trigger: GGAGAGGCAGTAGAGACATCATAGTTGTACTTTAGT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGAAACAGTGTTTCCAGTaGCACAACTCATCCAGAACT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGKQCFQ*HNSSRT
Trigger: AGTTCTGGATGAGTTGTGTCACTGGAAACACTGTTT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGACGGCCTTCAGTAAGTaGCCATTGTTGTATATGGAT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGTAFSK*PLLYMD
Trigger: ATCCATATACAACAATGGGCACTTACTGAAGGCCGT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTGTGCAATGAACATTTaGCTCTCTGTCATAGGATCC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGCAMNI*LSVIGS
Trigger: GGATCCTATGACAGAGAGGCAAATGTTCATTGCACA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTGCTTTGCTAAAAATTaGTTAGGTGCAGCTGCATCG +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGCFAKN*LGAAAS
Trigger: CGATGCAGCTGCACCTAAGCAATTTTTAGCAAAGCA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATATTCGCCTATCAGTTaGTCCACAAACAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVYSPIS*STNRSL
Trigger: GAGACTTCTGTTTGTGGAGCAACTGATAGGCGAATA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGAGAAGCAGGCCAGAGTaGATACGAGGATTTAAACAT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGRSRPE*IRGFKH
Trigger: ATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGGGTCCTTTTGTAACTaGCTATGCTTACACAGTTCA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVGSFCN*LCLHSS
Trigger: TGAACTGTGTAAGCATAGGCAGTTACAAAAGGACCC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTACCCATCAGTTGACTaGACAAGACGAAGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGYPSVD*TRRSVS
Trigger: ACTTACACTTCGTCTTGTCCAGTCAACTGATGGGTA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTACAAACAGGATGCTCTaGTTCTTGTCCATTTTCCTA +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVTNRML*FLSIFL
Trigger: TAGGAAAATGGACAAGAACCAGAGCATCCTGTTTGT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGAGGAAACTCTCATATaGCTAAAAAGGCAGGCTAGT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVEETLI*LKRQAS
Trigger: ACTAGCCTGCCTTTTTAGCCATATGAGAGTTTCCTC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCTGGAGTGTGCAGTGTaGAATGTCTCTAATACTACT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGLECAV*NVSNTT
Trigger: AGTAGTATTAGAGACATTCCACACTGCACACTCCAG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTAACATGTTATCTGGTTaGCAGCAAACACTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVNMLSG*QQTLKP
Trigger: TGGCTTTAGTGTTTGCTGCCAACCAGATAACATGTT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CAA 72 bp TCAAAACCTGTTCCCTCAGTGATTGCTGTTGTCAGTTaGGGCATGCAGCAAATTTGTTATAACCATGATGGA +
Preference number: 4 (lower is better)
Translates to: SKPVPSVIAVVS*GMQQICYNHDG
Trigger: TCCATCATGGTTATAACAAATTTGCTGCATGCCCAAACTGACAACAGCAATCACTGAGGGAACAGGTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGATGTTTAAGTACCTGTaGCAGGCTTCTATGTCAAAC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGMFKYL*QASMSN
Trigger: GTTTGACATAGAAGCCTGTCACAGGTACTTAAACAT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTGTTGTTTTATTGACTaGCTTGCTAGCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGCCFID*LASFSI
Trigger: GATGCTGAAGCTAGCAAGTCAGTCAATAAAACAACA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTGTGTTCCAACTCCTaGTCAATTTCATTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLCSNS*SISFCS
Trigger: GCTACAGAATGAAATTGATCAGGAGTTGGAACACAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTAAAATGGACCCAGTGTaGGTATATCTTCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVKMDPV*VYLHFQ
Trigger: CTGAAAATGAAGATATACTCACACTGGGTCCATTTT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAAATCTGATACATTTTaGATGGTGTGCCCATGGGTA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVKSDTF*MVCPWV
Trigger: TACCCATGGGCACACCATTCAAAATGTATCAGATTT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTCTTCTTCAAATCCTTaGAAGGTCTGGTATGGAAAA +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVSSSNP*KVWYGK
Trigger: TTTTCCATACCAGACCTTGCAAGGATTTGAAGAAGA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCTTCCCAAACACTACTaGTTAACTCAAGTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGLPKHY*LTQVCN
Trigger: ATTGCACACTTGAGTTAAGCAGTAGTGTTTGGGAAG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGTCAAACAAACAGGATaGTCTGGTTCTTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVVKQTG*SGSCPF
Trigger: AAATGGACAAGAACCAGAGCATCCTGTTTGTTTGAC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAATCTGTCCAACAAATTaGTCCTCTTTAGGGAGAACA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVICPTN*SSLGRT
Trigger: TGTTCTCCCTAAAGAGGAGCAATTTGTTGGACAGAT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGCACTTTTGCAGTTATaGTATTGTTTCCCTCACAAC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGALLQL*YCFPHN
Trigger: GTTGTGAGGGAAACAATAGCATAACTGCAAAAGTGC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTCAGTTTCAGCAACATaGTTGGGTATCATGAAAACT +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVSVSAT*LGIMKT
Trigger: AGTTTTCATGATACCCAAGCATGTTGCTGAAACTGA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGAGTCTGGTTTCTAAGTaGAGTGTGTTTGAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGSLVSK*SVFEAN
Trigger: GTTTGCTTCAAACACACTGCACTTAGAAACCAGACT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTGCTTTCCCTTTAAGATaGATACTTGTCTTACTGGAT +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVAFPLR*ILVLLD
Trigger: ATCCAGTAAGACAAGTATGCATCTTAAAGGGAAAGC...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTAATAGAAAGTGTTGTTaGAACACGTTTGGGACTATG +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVNRKCC*NTFGTM
Trigger: CATAGTCCCAAACGTGTTCCAACAACACTTTCTATT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGACGTTAGTAACTACATaGTGGTCTGATTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGTLVTT*WSDSPS
Trigger: AGAAGGAGAATCAGACCACCATGTAGTTACTAACGT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTGCTGTTGTCAGTTTaGGCATGCAGCAAATTTGTT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLLLSV*ACSKFV
Trigger: AACAAATTTGCTGCATGCCCAAACTGACAACAGCAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGAACGTGCTACAAATTaGTTCTCTTTGAGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGERATN*FSLRVS
Trigger: AGAAACCCTCAAAGAGAACCAATTTGTAGCACGTTC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCATGAAGCTTTTCTGTaGGGCTTCGATTATTTCAAG +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGHEAFL*GFDYFK
Trigger: CTTGAAATAATCGAAGCCCCACAGAAAAGCTTCATG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTATTATTTCCTTTCCATaGTTATGGTCGATTGCCAAC +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVIISFP*LWSIAN
Trigger: GTTGGCAATCGACCATAACCATGGAAAGGAAATAAT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCATAGGATCCAAAAATaGGTAACCTGCTACATTCTA +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGHRIQK*VTCYIL
Trigger: TAGAATGTAGCAGGTTACTCATTTTTGGATCCTATG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAACTACATGGTGGTCTaGTTCTCCTTCTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVNYMVV*FSFFQI
Trigger: TATTTGAAAGAAGGAGAATCAGACCACCATGTAGTT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACAGAAGTATTCAGAATaGTCACCATTCCTTTACAAC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVQKYSE*SPFLYN
Trigger: GTTGTAAAGGAATGGTGATCATTCTGAATACTTCTG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACATGCTTGGGTATCATaGAAACTTCCATGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVHAWVS*KLPWFN
Trigger: ATTAAACCATGGAAGTTTTCATGATACCCAAGCATG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATACTGCCTCTCCCAGTaGAATATAAAAATATTGCAC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVYCLSQ*NIKILH
Trigger: GTGCAATATTTTTATATTTCACTGGGAGAGGCAGTA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACTGGATGAAGAAAATTaGGGGTACATGTACCTTATA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLDEEN*GYMYLI
Trigger: TATAAGGTACATGTACCCTCAATTTTCTTCATCCAG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR TCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAACTTGTCTTACTGGATaGAGAAAATTGAGGGTACAT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVTCLTG*RKLRVH
Trigger: ATGTACCCTCAATTTTCTTCATCCAGTAAGACAAGT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTTGAACTCATTTTGTaGTCTGACATCACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVFELIL*SDITCQ
Trigger: TTGGCAAGTGATGTCAGAGCACAAAATGAGTTCAAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTCTTTGGCCACTTCTTaGTTTGCTAAAAATTGCTTA +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVSLATS*FAKNCL
Trigger: TAAGCAATTTTTAGCAAAGCAAGAAGTGGCCAAAGA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATCATTGAATCCCTTTTaGATACTCAGATTGCGTAGT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVSLNPF*ILRLRS
Trigger: ACTACGCAATCTGAGTATGCAAAAGGGATTCAATGA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTTTCTATATCTTCAATaGCTGCTCTGTAGTGAATCA +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVFLYLQ*LLCSES
Trigger: TGATTCACTACAGAGCAGGCATTGAAGATATAGAAA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTGTCAGTTTGGGCATaGAGCAAATTTGTTATAACC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLSVWA*SKFVIT
Trigger: GGTTATAACAAATTTGCTGCATGCCCAAACTGACAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAACAGCTCTTTCAAATaGATCAGTTTCAGCAACATG +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVNSSFK*ISFSNM
Trigger: CATGTTGCTGAAACTGATGCATTTGAAAGAGCTGTT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAAGTGGACTTTGTTATaGTTTTCTGCATGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVKWTLL*FSAWPN
Trigger: ATTTGGCCATGCAGAAAAGCATAACAAAGTCCACTT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTTGCAATTTTATTTTTaGCTTTACGGCTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVLQFYF*LYGSVS
Trigger: AGACACAGAGCCGTAAAGGCAAAAATAAAATTGCAA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGATGACAACATTGATGTaGCTTTTCAGTGTAACAGCA +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGMTTLM*LFSVTA
Trigger: TGCTGTTACACTGAAAAGGCACATCAATGTTGTCAT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTTAGTAACTACATGGTaGTCTGATTCTCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGLVTTW*SDSPSF
Trigger: GAAAGAAGGAGAATCAGACCACCATGTAGTTACTAA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCGATTATTTCAAGTCTaGTTTCTAAGTGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGRLFQV*FLSAVC
Trigger: ACACACTGCACTTAGAAACCAGACTTGAAATAATCG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTATATCTTCAATGCCTaGTCTGTAGTGAATCATAAG +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGYIFNA*SVVNHK
Trigger: CTTATGATTCACTACAGAGCAGGCATTGAAGATATA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATGTTCAAAGCACTTTTaGAGTTATGCTATTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVCSKHF*SYAIVS
Trigger: GGAAACAATAGCATAACTGCAAAAGTGCTTTGAACA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTTGTTATGCTTTTCTaGATGGCCAAATTATACCAG +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVFVMLF*MAKLYQ
Trigger: CTGGTATAATTTGGCCATGCAGAAAAGCATAACAAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR GCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACTATATCATCCAGTGTaGAGTGTTGTGTATTTTTCT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLYHPV*SVVYFS
Trigger: AGAAAAATACACAACACTGCACACTGGATGATATAG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTTGTTGGAACACGTTTaGGACTATGACTTAATGATT +
Preference number: 4 (lower is better)
Translates to: KCSVFEANELPTHLFGIGLLEHV*DYDLMI
Trigger: AATCATTAAGTCATAGTCCCAAACGTGTTCCAACAA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGTTTATTTCCATCTTTaGACTGAATTTTCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVVYFHL*TEFSVV
Trigger: TACCACCGAAAATTCAGTCCAAAGATGGAAATAAAC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAACATGGTTGTATCTGTaGTACTTTAGATGCAACTTT +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVTWLYL*YFRCNF
Trigger: AAAGTTGCATCTAAAGTACCACAGATACAACCATGT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CCA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTATGCTTTTCTGCATaGCCAAATTATACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLCFSA*PNYTRR
Trigger: TCTTCTGGTATAATTTGGCCATGCAGAAAAGCATAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CAA 72 bp TGTGCAGTGTTGTGTATTTTTCTAAGCATGACAACATaGATGTGCCTTTTCAGTGTAACAGCAAATACTGTT +
Preference number: 4 (lower is better)
Translates to: CAVLCIFLSMTT*MCLFSVTANTV
Trigger: AACAGTATTTGCTGTTACACTGAAAAGGCACATCAATGTTGTCATGCTTAGAAAAATACACAACACTGCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CAA 72 bp AATGTATGTGCTAACTATATCATCCAGTGTGCAGTGTaGTGTATTTTTCTAAGCATGACAACATTGATGTGC +
Preference number: 4 (lower is better)
Translates to: NVCANYIIQCAV*CIFLSMTTLMC
Trigger: GCACATCAATGTTGTCATGCTTAGAAAAATACACAACACTGCACACTGGATGATATAGTTAGCACATACATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
3UTR CAA 72 bp AAACAGCTAGTTCTCTCAAGTGTAGAGGACAAGAACTaGTGTCAGTTATCTTTTGAATCCATAAATCTTAGC +
Preference number: 4 (lower is better)
Translates to: KQLVLSSVEDKN*CQLSFESINLS
Trigger: GCTAAGATTTATGGATTCAAAAGATAACTGACACAAGTTCTTGTCCTCTACACTTGAGAGAACTAGCTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS TCA 90 bp CGCCGCCATAAAGGTACTCCCTTAGGAGCAGGCCCGGCACTGGCTTaGTGTAGCGGAAGCCCTCGCCCGCGCGGGCGGCCTCGTCCGCCG +
Preference number: 5 (lower is better)
Translates to: RRHKGTPLGAGPALA*CSGSPRPRGRPRPP
Trigger: CGGCGGACGAGGCCGCCCGCGCGGGCGAGGGCTTCCGCTACATCAAGCCAGTGCCGGGCCTGCTCCTAAGGGAGTACCTTTATGGCGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 90 bp CTCCCCTTCAGGGCCATCGGGCTCCCCGGTGGCCGAGGGCACGACTaGCCGCACGAGCCGGATGGTCTTGATGAAGGGCACCGTCTCGCC +
Preference number: 5 (lower is better)
Translates to: LPFRAIGLPGGRGHD*PHEPDGLDEGHRLA
Trigger: GGCGAGACGGTGCCCTTCATCAAGACCATCCGGCTCGTGCGGCCAGTCGTGCCCTCGGCCACCGGGGAGCCCGATGGCCCTGAAGGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 90 bp TCGTCCGCCGGCGGCTCGGGCTGTCTGCGGTACAGCAGGAAGAACTaGGCGAGGAGCGTGAGGAAGGAACCCAGCACGGCCGACGCCAGG +
Preference number: 5 (lower is better)
Translates to: SSAGGSGCLRYSRKN*ARSVRKEPSTADAR
Trigger: CCTGGCGTCGGCCGTGCTGGGTTCCTTCCTCACGCTCCTCGCCCAGTTCTTCCTGCTGTACCGCAGACAGCCCGAGCCGCCGGCGGACGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS TCA 90 bp GCGCGGTGTCCCGCAACTCCCGGAACAGGAATAGGATGGTGGCGTTaGGGAAGTAGCAAGTCTCCCGCGTCGGCGGGGCGGGGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: ARCPATPGTGIGWWR*GSSKSPASAGRGSR
Trigger: CCGAGACCCCCGCCCCGCCGACGCGGGAGACTTGCTACTTCCTCAACGCCACCATCCTATTCCTGTTCCGGGAGTTGCGGGACACCGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 90 bp TTGACGATGATGGAGGTGAGCTGGGGCATGGGCCGCCCTTCAAACTaGGAGCGCACCTCGAAGTCGATCAGCGGGTCTTCCACGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LTMMEVSWGMGRPSN*ERTSKSISGSSTKE
Trigger: CTCCTTCGTGGAAGACCCGCTGATCGACTTCGAGGTGCGCTCCCAGTTTGAAGGGCGGCCCATGCCCCAGCTCACCTCCATCATCGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 90 bp ACCTCGAAGTCGATCAGCGGGTCTTCCACGAAGGAGAAGAACCAGTaGGTGAAGGGCACGCGCGTAAAGACCAAGCGCAGCCTTCCCACC +
Preference number: 5 (lower is better)
Translates to: TSKSISGSSTKEKNQ*VKGTRVKTKRSLPT
Trigger: GGTGGGAAGGCTGCGCTTGGTCTTTACGCGCGTGCCCTTCACCCACTGGTTCTTCTCCTTCGTGGAAGACCCGCTGATCGACTTCGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 90 bp CGCTTGATGATCTTCTTGAGCTGGTTGACGATGATGGAGGTGAGCTaGGGCATGGGCCGCCCTTCAAACTGGGAGCGCACCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: RLMIFLSWLTMMEVS*GMGRPSNWERTSKS
Trigger: CGACTTCGAGGTGCGCTCCCAGTTTGAAGGGCGGCCCATGCCCCAGCTCACCTCCATCATCGTCAACCAGCTCAAGAAGATCATCAAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000489491.1
CDS CCA 90 bp TGCCTGATTTGGAGCATCGGCGGAAGGCAAAGGAACTTTCGCTTGTaGTCGTGGTGGCACAGGTGGTTTGAAAGCAGATCCTTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: CLIWSIGGRQRNFRL*SWWHRWFESRSLGW
Trigger: CCAACCCAAGGATCTGCTTTCAAACCACCTGTGCCACCACGACCACAAGCGAAAGTTCCTTTGCCTTCCGCCGATGCTCCAAATCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGAGGCGCCCGGCCGTCTaGGTCTGCAGCAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGRRPAV*VCSSSS
Trigger: CGAGGAGCTGCTGCAGACCAAGACGGCCGGGCGCCT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS GCA 90 bp ACCTCCAATGGCGATAAGTCGATCTCCCCGCTGAAGATCTGCAATTaGAGCAGGCGAGTTTGGAGCCACAGTTTCAATGATGACGTGCCC +
Preference number: 5 (lower is better)
Translates to: TSNGDKSISPLKICN*SRRVWSHSFNDDVP
Trigger: GGGCACGTCATCATTGAAACTGTGGCTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGAGATCGACTTATCGCCATTGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS TCA 90 bp GGCACCACCTTCTCTGGCTTTTCAACGAGAACATCTGGTTCTGCCTaGTTTGGAGCATCGGCGGAAGGCAAAGGAACTTTCGCTTGTGGT +
Preference number: 5 (lower is better)
Translates to: GTTFSGFSTRTSGSA*FGASAEGKGTFACG
Trigger: ACCACAAGCGAAAGTTCCTTTGCCTTCCGCCGATGCTCCAAATCAGGCAGAACCAGATGTTCTCGTTGAAAAGCCAGAGAAGGTGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS GCA 90 bp AGGTGGCACCACCTTCTCTGGCTTTTCAACGAGAACATCTGGTTCTaGCTGATTTGGAGCATCGGCGGAAGGCAAAGGAACTTTCGCTTG +
Preference number: 5 (lower is better)
Translates to: RWHHLLWLFNENIWF*LIWSIGGRQRNFRL
Trigger: CAAGCGAAAGTTCCTTTGCCTTCCGCCGATGCTCCAAATCAGGCAGAACCAGATGTTCTCGTTGAAAAGCCAGAGAAGGTGGTGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS GCA 90 bp AACTCCAATGGCGATAAGTCGATCTCCCCGCTGAAGATCTGCAATTaGAGCAGGCGAGTTTGGAGCCACAGTTTCAATGATGACGTGCCC +
Preference number: 5 (lower is better)
Translates to: NSNGDKSISPLKICN*SRRVWSHSFNDDVP
Trigger: GGGCACGTCATCATTGAAACTGTGGCTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGAGATCGACTTATCGCCATTGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489302.5
CDS CCA 90 bp AAGTCGATCTCCCCGCTGAAGATCTGCAATTGCAGCAGGCGAGTTTaGAGCCACAGTTTCAATGATGACGTGCCCAGCATACCCATCAGT +
Preference number: 5 (lower is better)
Translates to: KSISPLKICNCSRRV*SHSFNDDVPSIPIS
Trigger: ACTGATGGGTATGCTGGGCACGTCATCATTGAAACTGTGGCTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGAGATCGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5
ENST00000489491.1
CDS CCA 90 bp CACCTTCTCTGGCTTTTCAACGAGAACATCTGGTTCTGCCTGATTTaGAGCATCGGCGGAAGGCAAAGGAACTTTCGCTTGTGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: HLLWLFNENIWFCLI*SIGGRQRNFRLWSW
Trigger: CCACGACCACAAGCGAAAGTTCCTTTGCCTTCCGCCGATGCTCCAAATCAGGCAGAACCAGATGTTCTCGTTGAAAAGCCAGAGAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CCA 90 bp TTGGACCACAGACCTCCGTGTCACTGCCTTCGTTGTCTGACGTGTTaGGTGTGTGTTTTGGTGAAGGTTCTACGAGATCGGTTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: LDHRPPCHCLRCLTC*VCVLVKVLRDRFLV
Trigger: AACCAGGAACCGATCTCGTAGAACCTTCACCAAAACACACACCCAACACGTCAGACAACGAAGGCAGTGACACGGAGGTCTGTGGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACCCGCTGCCTCCATTTaGAGGACATCGGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVPAASI*RTSGGW
Trigger: CCAGCCGCCCGATGTCCTCAAAATGGAGGCAGCGGG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGAGGTGGAAGCCCCCGTaGTACTCCACCTCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGRWKPP*YSTSAS
Trigger: CGAGGCGGAGGTGGAGTACAACGGGGGCTTCCACCT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS TCA 90 bp AAGGCAAAGGAACTTTCGCTTGTGGTCGTGGTGGCACAGGTGGTTTaGAAGCAGATCCTTGGGTTGGTTTTGACACTTGTGCTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: KAKELSLVVVVAQVV*KQILGLVLTLVLGL
Trigger: CAGACCCAGCACAAGTGTCAAAACCAACCCAAGGATCTGCTTTCAAACCACCTGTGCCACCACGACCACAAGCGAAAGTTCCTTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS TCA 90 bp GATGTGATTTTCACACCTCCAATGGCGATAAGTCGATCTCCCCGCTaGAGATCTGCAATTGCAGCAGGCGAGTTTGGAGCCACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: DVIFTPPMAISRSPR*RSAIAAGEFGATVS
Trigger: TGAAACTGTGGCTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGAGATCGACTTATCGCCATTGGAGGTGTGAAAATCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS GCA 90 bp TTTCACACCTCCAATGGCGATAAGTCGATCTCCCCGCTGAAGATCTaGAATTGCAGCAGGCGAGTTTGGAGCCACAGTTTCAATGATGAC +
Preference number: 5 (lower is better)
Translates to: FHTSNGDKSISPLKI*NCSRRVWSHSFNDD
Trigger: GTCATCATTGAAACTGTGGCTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGAGATCGACTTATCGCCATTGGAGGTGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATCCACCTTGATCTTCTaGGTGACCCAGCGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVSTLIF*VTQRRV
Trigger: GACCCGCCGCTGGGTCACCAAGAAGATCAAGGTGGA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGACGAGCCGGATGGTCTaGATGAAGGGCACCGTCTCG +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGTSRMV*MKGTVS
Trigger: CGAGACGGTGCCCTTCATCAAGACCATCCGGCTCGT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS GCA 90 bp AGTTTGAACTCCAATGGCGATAAGTCGATCTCCCCGCTGAAGATCTaGAATTGCAGCAGGCGAGTTTGGAGCCACAGTTTCAATGATGAC +
Preference number: 5 (lower is better)
Translates to: SLNSNGDKSISPLKI*NCSRRVWSHSFNDD
Trigger: GTCATCATTGAAACTGTGGCTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGAGATCGACTTATCGCCATTGGAGTTCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489302.5
CDS CCA 90 bp TTCGCTTGTGGTCGTGGTGGCACAGGTGGTTTGAAAGCAGATCCTTaGGTTGGTTTTGACACTTGTGCTGGGTCTGTTATCTCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: FACGRGGTGGLKADP*VGFDTCAGSVISEV
Trigger: AACTTCTGAGATAACAGACCCAGCACAAGTGTCAAAACCAACCCAAGGATCTGCTTTCAAACCACCTGTGCCACCACGACCACAAGCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACTGGTTCTGCCTGATTaGGAGCATCGGCGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLVLPD*EHRRKA
Trigger: TGCCTTCCGCCGATGCTCCAAATCAGGCAGAACCAG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS GCA 90 bp TACACCAGGACTCGGTCACCAGCCTGCTTGATAAGCTTCAACACTTaGAGTGTTGATGTGATTTTCACACCTCCAATGGCGATAAGTCGA +
Preference number: 5 (lower is better)
Translates to: YTRTRSPACLISFNT*SVDVIFTPPMAISR
Trigger: TCGACTTATCGCCATTGGAGGTGTGAAAATCACATCAACACTGCAAGTGTTGAAGCTTATCAAGCAGGCTGGTGACCGAGTCCTGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTCGGTCACCAGCCTGCTaGATAAGCTTCAACACTTGC +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVRSPAC*ISFNTC
Trigger: GCAAGTGTTGAAGCTTATCAAGCAGGCTGGTGACCG...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCAAAGGAACTTTCGCTaGTGGTCGTGGTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGQRNFR*WSWWHR
Trigger: CCTGTGCCACCACGACCACAAGCGAAAGTTCCTTTG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGTGTCACTGCCTTCGTaGTCTGACGTGTTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGVSLPS*SDVLGV
Trigger: CACACCCAACACGTCAGACAACGAAGGCAGTGACAC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 90 bp CTTTTCAGCAGATTTATCTACAAGAGGAGGTGGCACCACCTTCTCTaGCTTTTCAACGAGAACATCTGGTTCTGCCTGATTTGGAGCATC +
Preference number: 5 (lower is better)
Translates to: LFSRFIYKRRWHHLL*LFNENIWFCLIWSI
Trigger: GATGCTCCAAATCAGGCAGAACCAGATGTTCTCGTTGAAAAGCCAGAGAAGGTGGTGCCACCTCCTCTTGTAGATAAATCTGCTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTCCTCGAACTCCACCTaGATCTTCTTGGTGACCCAG +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGSSNST*IFLVTQ
Trigger: CTGGGTCACCAAGAAGATCAAGGTGGAGTTCGAGGA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGCTGAAGATCTGCAATaGCAGCAGGCGAGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVAEDLQ*QQASLE
Trigger: CTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAGC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTGCAGCACTGCACCTaGATTACTCTGGCCAACAGG +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLQHCT*ITLANR
Trigger: CCTGTTGGCCAGAGTAATCAAGGTGCAGTGCTGCAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGGTGGCACAGGTGGTTaGAAAGCAGATCCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVGGTGG*KADPWV
Trigger: AACCCAAGGATCTGCTTTCAAACCACCTGTGCCACC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAATGAGACCTCCCAACTaGAAAGGATCCCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVMRPPN*KGSLHH
Trigger: GTGGTGCAGGGATCCTTTCAAGTTGGGAGGTCTCAT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTGGCATTGGGCAACTaGGCCAAGTCTGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLALGN*AKSATL
Trigger: CAAAGTGGCAGACTTGGCCAAGTTGCCCAATGCCAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAATCTTCTTGAGCTGGTaGACGATGATGGAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVIFLSW*TMMEVS
Trigger: GCTCACCTCCATCATCGTCAACCAGCTCAAGAAGAT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATTCGGTAGGGTGTGCTaGCGCTTGATGATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVFGRVC*RLMIFL
Trigger: CAAGAAGATCATCAAGCGCAAGCACACCCTACCGAA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGATCCTTGGGTTGGTTTaGACACTTGTGCTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGILGLV*TLVLGL
Trigger: CAGACCCAGCACAAGTGTCAAAACCAACCCAAGGAT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTAAGCAGATCCTTGGGTaGGTTTTGACACTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVKQILG*VLTLVL
Trigger: CAGCACAAGTGTCAAAACCAACCCAAGGATCTGCTT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTATACTCTAGGCTATTaGGAGTGTTCCCCCACTTGC +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVYTLGY*ECSPTC
Trigger: GCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAAGGTATGCCTGCTGTaGGTCCCTCGGGATAAGATA +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVKVCLL*VPRDKI
Trigger: TATCTTATCCCGAGGGACCAACAGCAGGCATACCTT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS TCA 90 bp GACTCGGTCACCAGCCTGCTTGATAAGCTTCAACACTTGCAGTGTTaGTGTGATTTTCACACCTTTTCAAACCAGATGATGACACAGGAT +
Preference number: 5 (lower is better)
Translates to: DSVTSLLDKLQHLQC*CDFHTFSNQMMTQD
Trigger: ATCCTGTGTCATCATCTGGTTTGAAAAGGTGTGAAAATCACATCAACACTGCAAGTGTTGAAGCTTATCAAGCAGGCTGGTGACCGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489302.5
CDS GCA 90 bp TTAGTAGGGCAGGAAGTTTCTGAAGTGACATCTTTGGCCACTTCTTaGTTTGCTAAAAATTGCTTAGGTGCAGCTGCATCGTCTATGGCA +
Preference number: 5 (lower is better)
Translates to: LVGQEVSEVTSLATS*FAKNCLGAAASSMA
Trigger: TGCCATAGACGATGCAGCTGCACCTAAGCAATTTTTAGCAAAGCAAGAAGTGGCCAAAGATGTCACTTCAGAAACTTCCTGCCCTACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCGCTTGATGATCTTCTaGAGCTGGTTGACGATGATG +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGRLMIF*SWLTMM
Trigger: CATCATCGTCAACCAGCTCAAGAAGATCATCAAGCG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTTTTGCATACTCAGATaGCGTAGTGCGGTTCTAGTG +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVFCILR*RSAVLV
Trigger: CACTAGAACCGCACTACGCAATCTGAGTATGCAAAA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTCATCTGTCCAACAAATaGCTCCTCTTTAGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVHLSNK*LLFREN
Trigger: GTTCTCCCTAAAGAGGAGCAATTTGTTGGACAGATG...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTCGTTGTCTGACGTGTaGGGTGTGTGTTTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGSLSDV*GVCFGE
Trigger: TTCACCAAAACACACACCCAACACGTCAGACAACGA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACTCACTTATTTGGCATaGGGCAACTTGGCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVLTYLA*GNLAKS
Trigger: AGACTTGGCCAAGTTGCCCAATGCCAAATAAGTGAG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS TCA 90 bp AACTTGAAAGGATCCCTGCACCACAATGCAATGTTTAAGTACCTGTaGCAGGCTTCTATGTCAAACAAACAGGATGCTCTGGTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: NLKGSLHHNAMFKYL*QASMSNKQDALVLV
Trigger: GACAAGAACCAGAGCATCCTGTTTGTTTGACATAGAAGCCTGTCACAGGTACTTAAACATTGCATTGTGGTGCAGGGATCCTTTCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CCA 90 bp GCCACAGTTTCAATGATGACGTGCCCAGCATACCCATCAGTTGACTaGACAAGACGAAGTGTAAGTCCAACACTTTGTAAATTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: ATVSMMTCPAYPSVD*TRRSVSPTLCKFPF
Trigger: AAAAGGAAATTTACAAAGTGTTGGACTTACACTTCGTCTTGTCCAGTCAACTGATGGGTATGCTGGGCACGTCATCATTGAAACTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5
ENST00000489491.1
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGTGTGCAATGAACATTaGCCTCTCTGTCATAGGATC +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGVCNEH*PLCHRI
Trigger: GATCCTATGACAGAGAGGCAAATGTTCATTGCACAC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAGTAGTCACACCATGTaGGGTTCTGGAACTGAGTAT +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVSSHTM*GSGTEY
Trigger: ATACTCAGTTCCAGAACCCAACATGGTGTGACTACT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCTATTCGCCTATCAGTaGCTCCACAAACAGAAGTCT +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGLFAYQ*LHKQKS
Trigger: AGACTTCTGTTTGTGGAGCAACTGATAGGCGAATAG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTATGTTGGGTGTGTGTTTaGGTGAAGGTTCTACGAGAT +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVCWVCV*VKVLRD
Trigger: ATCTCGTAGAACCTTCACCAAAACACACACCCAACA...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTATTGCTGTTGTCAGTTaGGGCATGCAGCAAATTTGT +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVIAVVS*GMQQIC
Trigger: ACAAATTTGCTGCATGCCCAAACTGACAACAGCAAT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAACAAATTGGTTCTCTTaGAGGGTTTCTGGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVTNWFS*RVSGSP
Trigger: GGGAGAACCAGAAACCCTCAAAGAGAACCAATTTGT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTAGAACGTGCTACAAATaGGTTCTCTTTGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVRTCYK*VLFEGF
Trigger: GAAACCCTCAAAGAGAACCAATTTGTAGCACGTTCT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS TCA 90 bp GCTACACAGACTCGGATGGGCCAAATAAGTCATCTGATATGCTGCTaGATGGCTGAGAGTCTATTAGTTGGCTTATTTCATTATCAAGGT +
Preference number: 5 (lower is better)
Translates to: ATQTRMGQISHLICC*MAESLLVGLFHYQG
Trigger: ACCTTGATAATGAAATAAGCCAACTAATAGACTCTCAGCCATTCAGCAGCATATCAGATGACTTATTTGGCCCATCCGAGTCTGTGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS GCA 90 bp GATGCAACTTTACCCTGTTCATTTGAAAGCTTAAATAGACCTGTCTaGTACACAGACTCGGATGGGCCAAATAAGTCATCTGATATGCTG +
Preference number: 5 (lower is better)
Translates to: DATLPCSFESLNRPV*YTDSDGPNKSSDML
Trigger: CAGCATATCAGATGACTTATTTGGCCCATCCGAGTCTGTGTAGCAGACAGGTCTATTTAAGCTTTCAAATGAACAGGGTAAAGTTGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTATCTTCTTCAAATCCTaGCAAGGTCTGGTATGGAAA +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVIFFKS*QGLVWK
Trigger: TTTCCATACCAGACCTTGCAAGGATTTGAAGAAGAT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTAGTAAGTGCCCATTGTaGTATATGGATATGCTCTTC +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVSKCPL*YMDMLF
Trigger: GAAGAGCATATCCATATACAACAATGGGCACTTACT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTACCGATTGGCATGAGCTaGACAAAAAGTTTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVPIGMS*TKSFLP
Trigger: TGGAAGAAAACTTTTTGTCAAGCTCATGCCAATCGG...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGAGGATGCTCTGGTTCTaGTCCATTTTCCTAGCTTAT +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGRMLWF*SIFLAY
Trigger: ATAAGCTAGGAAAATGGACAAGAACCAGAGCATCCT...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGCTTCCAGTCTCAATTaGGAAAGGTATTCCGTGTTT +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVASSLN*ERYSVF
Trigger: AAACACGGAATACCTTTCCAAATTGAGACTGGAAGC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGTTTCAGCAACATGCTaGGGTATCATGAAAACTTCC +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVVSATC*GIMKTS
Trigger: GGAAGTTTTCATGATACCCAAGCATGTTGCTGAAAC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGCTAAGTGCAGTGTGTTaGAAGCAAACGAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGLSAVC*KQTNFQ
Trigger: TTGGAAGTTCGTTTGCTTCAAACACACTGCACTTAG...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTCTAAGCATGACAACATaGATGTGCCTTTTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVLSMTT*MCLFSV
Trigger: TACACTGAAAAGGCACATCAATGTTGTCATGCTTAG...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTTCAGTAAGTGCCCATaGTTGTATATGGATATGCTC +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGFSKCP*LYMDML
Trigger: GAGCATATCCATATACAACAATGGGCACTTACTGAA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAGTTTTATTGACTGACTaGCTAGCTTCAGCATCAACA +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVVLLTD*LASAST
Trigger: TGTTGATGCTGAAGCTAGCAAGTCAGTCAATAAAAC...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTTTTGCAGTTATGCTATaGTTTCCCTCACAACAATAC +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVFAVML*FPSQQY
Trigger: GTATTGTTGTGAGGGAAACAATAGCATAACTGCAAA...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAAAATGTTGCTCAGTTaGTCTAAGCCATTCACTCAG +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVKMLLS*SKPFTQ
Trigger: CTGAGTGAATGGCTTAGACAAACTGAGCAACATTTT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAACCTTCAGAACTGTTTaGGAGCAAAAGATAGCTTGT +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVTFRTV*EQKIAC
Trigger: ACAAGCTATCTTTTGCTCCAAAACAGTTCTGAAGGT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAATCCAGTGTGCAGTGTaGTGTATTTTTCTAAGCATG +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVIQCAV*CIFLSM
Trigger: CATGCTTAGAAAAATACACAACACTGCACACTGGAT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGCAAGTAACTGGAGAAGCAGGCCAGAGTGCATACGAGGATTTAAACATGGTTATATCTTTGATCTGTTaGCAGGTCATCCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: KQVTGEAGQSAYEDLNMVISLIC*QVIQVF
Trigger: AAACACTTGGATGACCTGCAAACAGATCAAAGATAT...AACCATGTTTAAATCCTCGTATGCACTCTGGCCTGCTTCTCCAGTTACTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS GCA 90 bp ACTTTAAGACGGCCTTCAGTAAGTGCCCATTGTTGTATATGGATATaGTCTTCATCTTCTTCAAATCCTTGCAAGGTCTGGTATGGAAAA +
Preference number: 5 (lower is better)
Translates to: TLRRPSVSAHCCIWI*SSSSSNPCKVWYGK
Trigger: TTTTCCATACCAGACCTTGCAAGGATTTGAAGAAGATGAAGAGCATATCCATATACAACAATGGGCACTTACTGAAGGCCGTCTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 90 bp AACGTAACTTTAAGACGGCCTTCAGTAAGTGCCCATTGTTGTATATaGATATGCTCTTCATCTTCTTCAAATCCTTGCAAGGTCTGGTAT +
Preference number: 5 (lower is better)
Translates to: NVTLRRPSVSAHCCI*ICSSSSSNPCKVWY
Trigger: ATACCAGACCTTGCAAGGATTTGAAGAAGATGAAGAGCATATCCATATACAACAATGGGCACTTACTGAAGGCCGTCTTAAAGTTACGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp GTACCTTACTATACTCTAGGCTATTTGGAGTGTTCCCCCACTTGCACTAAAGTAAGGTGGTTTTTATGTTaGGACCTGGTAATACAGATA +
Preference number: 5 (lower is better)
Translates to: VPYYTLGYLECSPTCTKVRWFLC*DLVIQI
Trigger: TATCTGTATTACCAGGTCCAAACATAAAAACCACCT...TACTTTAGTGCAAGTGGGGGAACACTCCAAATAGCCTAGAGTATAGTAAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGTATCTGACTATATCTTaGATCTGTTTGCAGGTCATC +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGYLTIS*ICLQVI
Trigger: GATGACCTGCAAACAGATCAAAGATATAGTCAGATA...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS-3UTR CAA 90 bp AAGTGCAGTGTGTTTGAAGCAAACGAACTTCCAACTCACTTATTTGGCATTGGGGTAGAGGACAAGAACTaGTGTCAGTTATCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: KCSVFEANELPTHLFGIGVEDKN*CQLSFE
Trigger: TTCAAAAGATAACTGACACAAGTTCTTGTCCTCTAC...CCCAATGCCAAATAAGTGAGTTGGAAGTTCGTTTGCTTCAAACACACTGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS TCA 90 bp TCTACGAGATCGGTTCCTGGTTCAGAAAGGCGAGTTTTAGAGACTTaGCGCAAATTTAATAAACGAGAACTAGTATTGATAATATGCCTT +
Preference number: 5 (lower is better)
Translates to: STRSVPGSERRVLET*RKFNKRELVLIICL
Trigger: AAGGCATATTATCAATACTAGTTCTCGTTTATTAAATTTGCGTCAAGTCTCTAAAACTCGCCTTTCTGAACCAGGAACCGATCTCGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 90 bp TTAAGTACCTGTGACAGGCTTCTATGTCAAACAAACAGGATGCTCTaGTTCTTGTCCATTTTCCTAGCTTATTACGATAAAGAATTTCTG +
Preference number: 5 (lower is better)
Translates to: LSTCDRLLCQTNRML*FLSIFLAYYDKEFL
Trigger: CAGAAATTCTTTATCGTAATAAGCTAGGAAAATGGACAAGAACCAGAGCATCCTGTTTGTTTGACATAGAAGCCTGTCACAGGTACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS TCA 90 bp GTCTCTTTTTCTTCTCTAACAAGGGAATTATTGTGTTCCAACTCCTaGTCAATTTCATTCTGTAGCTTATCCAACATGAACTCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: VSFSSLTRELLCSNS*SISFCSLSNMNSSF
Trigger: GAAACTAGAGTTCATGTTGGATAAGCTACAGAATGAAATTGATCAGGAGTTGGAACACAATAATTCCCTTGTTAGAGAAGAAAAAGAGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 72 bp GCAGCGCCTCCCCTTCAGGGCCATCGGGCTCCCCGGTaGCCGAGGGCACGACTGGCCGCACGAGCCGGATGG +
Preference number: 6 (lower is better)
Translates to: AAPPLQGHRAPR*PRARLAARAGW
Trigger: CCATCCGGCTCGTGCGGCCAGTCGTGCCCTCGGCCACCGGGGAGCCCGATGGCCCTGAAGGGGAGGCGCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 90 bp CCACAGCGCCGCTTTCTTCACGCCGCCGCCCCCGCTGCCTCCATTTaGAGGACATCGGGCGGCTGGGTCGGGGCGAGCGGCTCCGTGGGC +
Preference number: 6 (lower is better)
Translates to: PQRRFLHAAAPAASI*RTSGGWVGASGSVG
Trigger: GCCCACGGAGCCGCTCGCCCCGACCCAGCCGCCCGATGTCCTCAAAATGGAGGCAGCGGGGGCGGCGGCGTGAAGAAAGCGGCGCTGTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS GCA 72 bp CCCACAGCGCCGCTTTCTTCACGCCGCCGCCCCCGCTaGCTCCATTTTGAGGACATCGGGCGGCTGGGTCGG +
Preference number: 6 (lower is better)
Translates to: PTAPLSSRRRPR*LHFEDIGRLGR
Trigger: CCGACCCAGCCGCCCGATGTCCTCAAAATGGAGGCAGCGGGGGCGGCGGCGTGAAGAAAGCGGCGCTGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 90 bp TCCCCGGTGGCCGAGGGCACGACTGGCCGCACGAGCCGGATGGTCTaGATGAAGGGCACCGTCTCGCCCAGGAACACGTCCCGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: SPVAEGTTGRTSRMV*MKGTVSPRNTSRRL
Trigger: GAGCCTGCGGGACGTGTTCCTGGGCGAGACGGTGCCCTTCATCAAGACCATCCGGCTCGTGCGGCCAGTCGTGCCCTCGGCCACCGGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 90 bp AGGCGCCCGGCCGTCTTGGTCTGCAGCAGCTCCTCGAACTCCACCTaGATCTTCTTGGTGACCCAGCGGCGGGTCAGCGCGGTGTCCCGC +
Preference number: 6 (lower is better)
Translates to: RRPAVLVCSSSSNST*IFLVTQRRVSAVSR
Trigger: GCGGGACACCGCGCTGACCCGCCGCTGGGTCACCAAGAAGATCAAGGTGGAGTTCGAGGAGCTGCTGCAGACCAAGACGGCCGGGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 90 bp TTGCCGAAGACCAGGTCCACGTCGATGGCCAGGTGGAAGCCCCCGTaGTACTCCACCTCCGCCTCGAAGGCCAGCTCCTCGGGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: LPKTRSTSMARWKPP*YSTSASKASSSGQA
Trigger: CGCCTGCCCCGAGGAGCTGGCCTTCGAGGCGGAGGTGGAGTACAACGGGGGCTTCCACCTGGCCATCGACGTGGACCTGGTCTTCGGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS TCA 72 bp AAAGGTACTCCCTTAGGAGCAGGCCCGGCACTGGCTTaGTGTAGCGGAAGCCCTCGCCCGCGCGGGCGGCCT +
Preference number: 6 (lower is better)
Translates to: KGTPLGAGPALA*CSGSPRPRGRP
Trigger: AGGCCGCCCGCGCGGGCGAGGGCTTCCGCTACATCAAGCCAGTGCCGGGCCTGCTCCTAAGGGAGTACCTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 72 bp GCCGAGGGCACGACTGGCCGCACGAGCCGGATGGTCTaGATGAAGGGCACCGTCTCGCCCAGGAACACGTCC +
Preference number: 6 (lower is better)
Translates to: AEGTTGRTSRMV*MKGTVSPRNTS
Trigger: GGACGTGTTCCTGGGCGAGACGGTGCCCTTCATCAAGACCATCCGGCTCGTGCGGCCAGTCGTGCCCTCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 72 bp ACCAGGTCCACGTCGATGGCCAGGTGGAAGCCCCCGTaGTACTCCACCTCCGCCTCGAAGGCCAGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: TRSTSMARWKPP*YSTSASKASSS
Trigger: CGAGGAGCTGGCCTTCGAGGCGGAGGTGGAGTACAACGGGGGCTTCCACCTGGCCATCGACGTGGACCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 90 bp GCCGTCTTGGTCTGCAGCAGCTCCTCGAACTCCACCTTGATCTTCTaGGTGACCCAGCGGCGGGTCAGCGCGGTGTCCCGCAACTCCCGG +
Preference number: 6 (lower is better)
Translates to: AVLVCSSSSNSTLIF*VTQRRVSAVSRNSR
Trigger: CCGGGAGTTGCGGGACACCGCGCTGACCCGCCGCTGGGTCACCAAGAAGATCAAGGTGGAGTTCGAGGAGCTGCTGCAGACCAAGACGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS TCA 72 bp CCCGCAACTCCCGGAACAGGAATAGGATGGTGGCGTTaGGGAAGTAGCAAGTCTCCCGCGTCGGCGGGGCGG +
Preference number: 6 (lower is better)
Translates to: PATPGTGIGWWR*GSSKSPASAGR
Trigger: CCGCCCCGCCGACGCGGGAGACTTGCTACTTCCTCAACGCCACCATCCTATTCCTGTTCCGGGAGTTGCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 72 bp GTCTGCAGCAGCTCCTCGAACTCCACCTTGATCTTCTaGGTGACCCAGCGGCGGGTCAGCGCGGTGTCCCGC +
Preference number: 6 (lower is better)
Translates to: VCSSSSNSTLIF*VTQRRVSAVSR
Trigger: GCGGGACACCGCGCTGACCCGCCGCTGGGTCACCAAGAAGATCAAGGTGGAGTTCGAGGAGCTGCTGCAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 72 bp GACTTGCCGAAGACCAGGTCCACGTCGATGGCCAGGTaGAAGCCCCCGTTGTACTCCACCTCCGCCTCGAAG +
Preference number: 6 (lower is better)
Translates to: DLPKTRSTSMAR*KPPLYSTSASK
Trigger: CTTCGAGGCGGAGGTGGAGTACAACGGGGGCTTCCACCTGGCCATCGACGTGGACCTGGTCTTCGGCAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 72 bp AGTAGGCGGACTTGCCGAAGACCAGGTCCACGTCGATaGCCAGGTGGAAGCCCCCGTTGTACTCCACCTCCG +
Preference number: 6 (lower is better)
Translates to: SRRTCRRPGPRR*PGGSPRCTPPP
Trigger: CGGAGGTGGAGTACAACGGGGGCTTCCACCTGGCCATCGACGTGGACCTGGTCTTCGGCAAGTCCGCCTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 72 bp ATGGAGGTGAGCTGGGGCATGGGCCGCCCTTCAAACTaGGAGCGCACCTCGAAGTCGATCAGCGGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: MEVSWGMGRPSN*ERTSKSISGSS
Trigger: GGAAGACCCGCTGATCGACTTCGAGGTGCGCTCCCAGTTTGAAGGGCGGCCCATGCCCCAGCTCACCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 72 bp GCCGTCTTGGTCTGCAGCAGCTCCTCGAACTCCACCTaGATCTTCTTGGTGACCCAGCGGCGGGTCAGCGCG +
Preference number: 6 (lower is better)
Translates to: AVLVCSSSSNST*IFLVTQRRVSA
Trigger: CGCGCTGACCCGCCGCTGGGTCACCAAGAAGATCAAGGTGGAGTTCGAGGAGCTGCTGCAGACCAAGACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 72 bp TCGATCAGCGGGTCTTCCACGAAGGAGAAGAACCAGTaGGTGAAGGGCACGCGCGTAAAGACCAAGCGCAGC +
Preference number: 6 (lower is better)
Translates to: SISGSSTKEKNQ*VKGTRVKTKRS
Trigger: GCTGCGCTTGGTCTTTACGCGCGTGCCCTTCACCCACTGGTTCTTCTCCTTCGTGGAAGACCCGCTGATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 72 bp ATCTTCTTGAGCTGGTTGACGATGATGGAGGTGAGCTaGGGCATGGGCCGCCCTTCAAACTGGGAGCGCACC +
Preference number: 6 (lower is better)
Translates to: IFLSWLTMMEVS*GMGRPSNWERT
Trigger: GGTGCGCTCCCAGTTTGAAGGGCGGCCCATGCCCCAGCTCACCTCCATCATCGTCAACCAGCTCAAGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000489491.1
CDS CAA 72 bp AGGGTGTGCTTGCGCTTGATGATCTTCTTGAGCTGGTaGACGATGATGGAGGTGAGCTGGGGCATGGGCCGC +
Preference number: 6 (lower is better)
Translates to: RVCLRLMIFLSW*TMMEVSWGMGR
Trigger: GCGGCCCATGCCCCAGCTCACCTCCATCATCGTCAACCAGCTCAAGAAGATCATCAAGCGCAAGCACACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000489491.1
CDS CCA 72 bp GGTAGGGTGTGCTTGCGCTTGATGATCTTCTTGAGCTaGTTGACGATGATGGAGGTGAGCTGGGGCATGGGC +
Preference number: 6 (lower is better)
Translates to: GRVCLRLMIFLS*LTMMEVSWGMG
Trigger: GCCCATGCCCCAGCTCACCTCCATCATCGTCAACCAGCTCAAGAAGATCATCAAGCGCAAGCACACCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000489491.1
CDS CCA 72 bp GGCGGAAGGCAAAGGAACTTTCGCTTGTGGTCGTGGTaGCACAGGTGGTTTGAAAGCAGATCCTTGGGTTGG +
Preference number: 6 (lower is better)
Translates to: GGRQRNFRLWSW*HRWFESRSLGW
Trigger: CCAACCCAAGGATCTGCTTTCAAACCACCTGTGCCACCACGACCACAAGCGAAAGTTCCTTTGCCTTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CCA 72 bp TGGAGCATCGGCGGAAGGCAAAGGAACTTTCGCTTGTaGTCGTGGTGGCACAGGTGGTTTGAAAGCAGATCC +
Preference number: 6 (lower is better)
Translates to: WSIGGRQRNFRL*SWWHRWFESRS
Trigger: GGATCTGCTTTCAAACCACCTGTGCCACCACGACCACAAGCGAAAGTTCCTTTGCCTTCCGCCGATGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS TCA 72 bp TTCACACCTCCAATGGCGATAAGTCGATCTCCCCGCTaGAGATCTGCAATTGCAGCAGGCGAGTTTGGAGCC +
Preference number: 6 (lower is better)
Translates to: FTPPMAISRSPR*RSAIAAGEFGA
Trigger: GGCTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGAGATCGACTTATCGCCATTGGAGGTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 90 bp TTCTGCCTGATTTGGAGCATCGGCGGAAGGCAAAGGAACTTTCGCTaGTGGTCGTGGTGGCACAGGTGGTTTGAAAGCAGATCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: FCLIWSIGGRQRNFR*WSWWHRWFESRSLG
Trigger: ACCCAAGGATCTGCTTTCAAACCACCTGTGCCACCACGACCACAAGCGAAAGTTCCTTTGCCTTCCGCCGATGCTCCAAATCAGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 90 bp CCTCCGTGTCACTGCCTTCGTTGTCTGACGTGTTGGGTGTGTGTTTaGGTGAAGGTTCTACGAGATCGGTTCCTGGTTCAGAAAGGCGAG +
Preference number: 6 (lower is better)
Translates to: PPCHCLRCLTCWVCV*VKVLRDRFLVQKGE
Trigger: CTCGCCTTTCTGAACCAGGAACCGATCTCGTAGAACCTTCACCAAAACACACACCCAACACGTCAGACAACGAAGGCAGTGACACGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS GCA 72 bp GCAGGCGAGTTTGGAGCCACAGTTTCAATGATGACGTaGCCAGCATACCCATCAGTTGACTGGACAAGACGA +
Preference number: 6 (lower is better)
Translates to: AGEFGATVSMMT*PAYPSVDWTRR
Trigger: TCGTCTTGTCCAGTCAACTGATGGGTATGCTGGGCACGTCATCATTGAAACTGTGGCTCCAAACTCGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5
ENST00000489491.1
CDS GCA 72 bp TCCAATGGCGATAAGTCGATCTCCCCGCTGAAGATCTaGAATTGCAGCAGGCGAGTTTGGAGCCACAGTTTC +
Preference number: 6 (lower is better)
Translates to: SNGDKSISPLKI*NCSRRVWSHSF
Trigger: GAAACTGTGGCTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGAGATCGACTTATCGCCATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5
ENST00000489491.1
CDS CCA 72 bp TCCCCGCTGAAGATCTGCAATTGCAGCAGGCGAGTTTaGAGCCACAGTTTCAATGATGACGTGCCCAGCATA +
Preference number: 6 (lower is better)
Translates to: SPLKICNCSRRV*SHSFNDDVPSI
Trigger: TATGCTGGGCACGTCATCATTGAAACTGTGGCTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5
ENST00000489491.1
CDS CCA 72 bp AGACCTCCGTGTCACTGCCTTCGTTGTCTGACGTGTTaGGTGTGTGTTTTGGTGAAGGTTCTACGAGATCGG +
Preference number: 6 (lower is better)
Translates to: RPPCHCLRCLTC*VCVLVKVLRDR
Trigger: CCGATCTCGTAGAACCTTCACCAAAACACACACCCAACACGTCAGACAACGAAGGCAGTGACACGGAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 72 bp ATTTGGAGCATCGGCGGAAGGCAAAGGAACTTTCGCTaGTGGTCGTGGTGGCACAGGTGGTTTGAAAGCAGA +
Preference number: 6 (lower is better)
Translates to: IWSIGGRQRNFR*WSWWHRWFESR
Trigger: TCTGCTTTCAAACCACCTGTGCCACCACGACCACAAGCGAAAGTTCCTTTGCCTTCCGCCGATGCTCCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 72 bp CAGACCTCCGTGTCACTGCCTTCGTTGTCTGACGTGTaGGGTGTGTGTTTTGGTGAAGGTTCTACGAGATCG +
Preference number: 6 (lower is better)
Translates to: QTSVSLPSLSDV*GVCFGEGSTRS
Trigger: CGATCTCGTAGAACCTTCACCAAAACACACACCCAACACGTCAGACAACGAAGGCAGTGACACGGAGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 90 bp CCACCTTCTCTGGCTTTTCAACGAGAACATCTGGTTCTGCCTGATTaGGAGCATCGGCGGAAGGCAAAGGAACTTTCGCTTGTGGTCGTG +
Preference number: 6 (lower is better)
Translates to: PPSLAFQREHLVLPD*EHRRKAKELSLVVV
Trigger: CACGACCACAAGCGAAAGTTCCTTTGCCTTCCGCCGATGCTCCAAATCAGGCAGAACCAGATGTTCTCGTTGAAAAGCCAGAGAAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 90 bp TTTGGACCACAGACCTCCGTGTCACTGCCTTCGTTGTCTGACGTGTaGGGTGTGTGTTTTGGTGAAGGTTCTACGAGATCGGTTCCTGGT +
Preference number: 6 (lower is better)
Translates to: FGPQTSVSLPSLSDV*GVCFGEGSTRSVPG
Trigger: ACCAGGAACCGATCTCGTAGAACCTTCACCAAAACACACACCCAACACGTCAGACAACGAAGGCAGTGACACGGAGGTCTGTGGTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 90 bp GAAGGCAAAGGAACTTTCGCTTGTGGTCGTGGTGGCACAGGTGGTTaGAAAGCAGATCCTTGGGTTGGTTTTGACACTTGTGCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: EGKGTFACGRGGTGG*KADPWVGFDTCAGS
Trigger: AGACCCAGCACAAGTGTCAAAACCAACCCAAGGATCTGCTTTCAAACCACCTGTGCCACCACGACCACAAGCGAAAGTTCCTTTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS GCA 72 bp GGCGATAAGTCGATCTCCCCGCTGAAGATCTGCAATTaGAGCAGGCGAGTTTGGAGCCACAGTTTCAATGAT +
Preference number: 6 (lower is better)
Translates to: GDKSISPLKICN*SRRVWSHSFND
Trigger: ATCATTGAAACTGTGGCTCCAAACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGAGATCGACTTATCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5
ENST00000489491.1
CDS GCA 72 bp CACCTTCTCTGGCTTTTCAACGAGAACATCTGGTTCTaGCTGATTTGGAGCATCGGCGGAAGGCAAAGGAAC +
Preference number: 6 (lower is better)
Translates to: HLLWLFNENIWF*LIWSIGGRQRN
Trigger: GTTCCTTTGCCTTCCGCCGATGCTCCAAATCAGGCAGAACCAGATGTTCTCGTTGAAAAGCCAGAGAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 72 bp CACTGCCTTCGTTGTCTGACGTGTTGGGTGTGTGTTTaGGTGAAGGTTCTACGAGATCGGTTCCTGGTTCAG +
Preference number: 6 (lower is better)
Translates to: HCLRCLTCWVCV*VKVLRDRFLVQ
Trigger: CTGAACCAGGAACCGATCTCGTAGAACCTTCACCAAAACACACACCCAACACGTCAGACAACGAAGGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CCA 72 bp TGGCTTTTCAACGAGAACATCTGGTTCTGCCTGATTTaGAGCATCGGCGGAAGGCAAAGGAACTTTCGCTTG +
Preference number: 6 (lower is better)
Translates to: WLFNENIWFCLI*SIGGRQRNFRL
Trigger: CAAGCGAAAGTTCCTTTGCCTTCCGCCGATGCTCCAAATCAGGCAGAACCAGATGTTCTCGTTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 72 bp GGAACTTTCGCTTGTGGTCGTGGTGGCACAGGTGGTTaGAAAGCAGATCCTTGGGTTGGTTTTGACACTTGT +
Preference number: 6 (lower is better)
Translates to: GTFACGRGGTGG*KADPWVGFDTC
Trigger: ACAAGTGTCAAAACCAACCCAAGGATCTGCTTTCAAACCACCTGTGCCACCACGACCACAAGCGAAAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 72 bp CTGGCTTTTCAACGAGAACATCTGGTTCTGCCTGATTaGGAGCATCGGCGGAAGGCAAAGGAACTTTCGCTT +
Preference number: 6 (lower is better)
Translates to: LAFQREHLVLPD*EHRRKAKELSL
Trigger: AAGCGAAAGTTCCTTTGCCTTCCGCCGATGCTCCAAATCAGGCAGAACCAGATGTTCTCGTTGAAAAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS TCA 72 bp TTCTCTGGCTTTTCAACGAGAACATCTGGTTCTGCCTaGTTTGGAGCATCGGCGGAAGGCAAAGGAACTTTC +
Preference number: 6 (lower is better)
Translates to: FSGFSTRTSGSA*FGASAEGKGTF
Trigger: GAAAGTTCCTTTGCCTTCCGCCGATGCTCCAAATCAGGCAGAACCAGATGTTCTCGTTGAAAAGCCAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 90 bp AAAGTTTTCTTCCAACTGGCCAAAGTTATCTTGCAGCACTGCACCTaGATTACTCTGGCCAACAGGCCTTTCATAGTACACCAGGACTCG +
Preference number: 6 (lower is better)
Translates to: KVFFQLAKVILQHCT*ITLANRPFIVHQDS
Trigger: CGAGTCCTGGTGTACTATGAAAGGCCTGTTGGCCAGAGTAATCAAGGTGCAGTGCTGCAAGATAACTTTGGCCAGTTGGAAGAAAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5
CDS CAA 90 bp CTGTCAACCCGGCAGCTTCCTCTTCATAACCCGATTGGCATGAGCTaGACAAAAAGTTTTCTTCCAACTGGCCAAAGTTATCTTGCAGCA +
Preference number: 6 (lower is better)
Translates to: LSTRQLPLHNPIGMS*TKSFLPTGQSYLAA
Trigger: TGCTGCAAGATAACTTTGGCCAGTTGGAAGAAAACTTTTTGTCAAGCTCATGCCAATCGGGTTATGAAGAGGAAGCTGCCGGGTTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5
CDS CAA 90 bp GTTCTAGTGACTATAGCCTTAGGTGAGGGGGCTTCCAGTCTCAATTaGGAAAGGTATTCCGTGTTTGATGTAGCTAGGCATCCTAAAGCC +
Preference number: 6 (lower is better)
Translates to: VLVTIALGEGASSLN*ERYSVFDVARHPKA
Trigger: GGCTTTAGGATGCCTAGCTACATCAAACACGGAATACCTTTCCAAATTGAGACTGGAAGCCCCCTCACCTAAGGCTATAGTCACTAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 72 bp TTCCAACTGGCCAAAGTTATCTTGCAGCACTGCACCTaGATTACTCTGGCCAACAGGCCTTTCATAGTACAC +
Preference number: 6 (lower is better)
Translates to: FQLAKVILQHCT*ITLANRPFIVH
Trigger: GTGTACTATGAAAGGCCTGTTGGCCAGAGTAATCAAGGTGCAGTGCTGCAAGATAACTTTGGCCAGTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5
CDS TCA 72 bp AGTTTCAATGATGACGTGCCCAGCATACCCATCAGTTaGCTGGACAAGACGAAGTGTAAGTCCAACACTTTG +
Preference number: 6 (lower is better)
Translates to: SFNDDVPSIPIS*LDKTKCKSNTL
Trigger: CAAAGTGTTGGACTTACACTTCGTCTTGTCCAGTCAACTGATGGGTATGCTGGGCACGTCATCATTGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5
ENST00000489491.1
CDS TCA 72 bp ACCAGCCTGCTTGATAAGCTTCAACACTTGCAGTGTTaGTGTGATTTTCACACCTCCAATGGCGATAAGTCG +
Preference number: 6 (lower is better)
Translates to: TSLLDKLQHLQC*CDFHTSNGDKS
Trigger: CGACTTATCGCCATTGGAGGTGTGAAAATCACATCAACACTGCAAGTGTTGAAGCTTATCAAGCAGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS TCA 72 bp GGATCCCTGCACCACAATGCAATGTTTAAGTACCTGTaGCAGGCTTCTATGTCAAACAAACAGGATGCTCTG +
Preference number: 6 (lower is better)
Translates to: GSLHHNAMFKYL*QASMSNKQDAL
Trigger: CAGAGCATCCTGTTTGTTTGACATAGAAGCCTGTCACAGGTACTTAAACATTGCATTGTGGTGCAGGGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 72 bp ACTATAGCCTTAGGTGAGGGGGCTTCCAGTCTCAATTaGGAAAGGTATTCCGTGTTTGATGTAGCTAGGCAT +
Preference number: 6 (lower is better)
Translates to: TIALGEGASSLN*ERYSVFDVARH
Trigger: ATGCCTAGCTACATCAAACACGGAATACCTTTCCAAATTGAGACTGGAAGCCCCCTCACCTAAGGCTATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS TCA 72 bp CACAGGTGGTTTGAAAGCAGATCCTTGGGTTGGTTTTaGCACTTGTGCTGGGTCTGTTATCTCAGAAGTTTT +
Preference number: 6 (lower is better)
Translates to: HRWFESRSLGWF*HLCWVCYLRSF
Trigger: AAAACTTCTGAGATAACAGACCCAGCACAAGTGTCAAAACCAACCCAAGGATCTGCTTTCAAACCACCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS GCA 72 bp CGGCCTTCAGTAAGTGCCCATTGTTGTATATGGATATaGTCTTCATCTTCTTCAAATCCTTGCAAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: RPSVSAHCCIWI*SSSSSNPCKVW
Trigger: CCAGACCTTGCAAGGATTTGAAGAAGATGAAGAGCATATCCATATACAACAATGGGCACTTACTGAAGGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS GCA 72 bp CAGGAAGTTTCTGAAGTGACATCTTTGGCCACTTCTTaGTTTGCTAAAAATTGCTTAGGTGCAGCTGCATCG +
Preference number: 6 (lower is better)
Translates to: QEVSEVTSLATS*FAKNCLGAAAS
Trigger: CGATGCAGCTGCACCTAAGCAATTTTTAGCAAAGCAAGAAGTGGCCAAAGATGTCACTTCAGAAACTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CCA 72 bp TCAATGATGACGTGCCCAGCATACCCATCAGTTGACTaGACAAGACGAAGTGTAAGTCCAACACTTTGTAAA +
Preference number: 6 (lower is better)
Translates to: SMMTCPAYPSVD*TRRSVSPTLCK
Trigger: TTTACAAAGTGTTGGACTTACACTTCGTCTTGTCCAGTCAACTGATGGGTATGCTGGGCACGTCATCATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5
ENST00000489491.1
CDS CCA 72 bp TCATTCTGTAGCTTATCCAACATGAACTCTAGTTTCTaGATCCTTTCCTCTGTAGGCAAGCCCCTGTACAGA +
Preference number: 6 (lower is better)
Translates to: SFCSLSNMNSSF*ILSSVGKPLYR
Trigger: TCTGTACAGGGGCTTGCCTACAGAGGAAAGGATCCAGAAACTAGAGTTCATGTTGGATAAGCTACAGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 72 bp AAACTAACATGCCCCAAACAGATGAGACCTCCCAACTaGAAAGGATCCCTGCACCACAATGCAATGTTTAAG +
Preference number: 6 (lower is better)
Translates to: KLTCPKQMRPPN*KGSLHHNAMFK
Trigger: CTTAAACATTGCATTGTGGTGCAGGGATCCTTTCAAGTTGGGAGGTCTCATCTGTTTGGGGCATGTTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 90 bp CGAGAACTAGTATTGATAATATGCCTTGTCAAACCTGTTGTTTTATaGACTGACTTGCTAGCTTCAGCATCAACACGAGGAGGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: RELVLIICLVKPVVL*TDLLASASTRGGRP
Trigger: AGGCCTGCCTCCTCGTGTTGATGCTGAAGCTAGCAAGTCAGTCAATAAAACAACAGGTTTGACAAGGCATATTATCAATACTAGTTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS TCA 72 bp GATAATATGCCTTGTCAAACCTGTTGTTTTATTGACTaGCTTGCTAGCTTCAGCATCAACACGAGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: DNMPCQTCCFID*LASFSINTRRQ
Trigger: CTGCCTCCTCGTGTTGATGCTGAAGCTAGCAAGTCAGTCAATAAAACAACAGGTTTGACAAGGCATATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS GCA 72 bp TTACCCTGTTCATTTGAAAGCTTAAATAGACCTGTCTaGTACACAGACTCGGATGGGCCAAATAAGTCATCT +
Preference number: 6 (lower is better)
Translates to: LPCSFESLNRPV*YTDSDGPNKSS
Trigger: AGATGACTTATTTGGCCCATCCGAGTCTGTGTAGCAGACAGGTCTATTTAAGCTTTCAAATGAACAGGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 72 bp CAAAATTTGTCATTGAATCCCTTTTGCATACTCAGATaGCGTAGTGCGGTTCTAGTGACTATAGCCTTAGGT +
Preference number: 6 (lower is better)
Translates to: QNLSLNPFCILR*RSAVLVTIALG
Trigger: ACCTAAGGCTATAGTCACTAGAACCGCACTACGCAATCTGAGTATGCAAAAGGGATTCAATGACAAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CCA 72 bp TGTGACAGGCTTCTATGTCAAACAAACAGGATGCTCTaGTTCTTGTCCATTTTCCTAGCTTATTACGATAAA +
Preference number: 6 (lower is better)
Translates to: CDRLLCQTNRML*FLSIFLAYYDK
Trigger: TTTATCGTAATAAGCTAGGAAAATGGACAAGAACCAGAGCATCCTGTTTGTTTGACATAGAAGCCTGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS CAA 72 bp CAACGTAACTTTAAGACGGCCTTCAGTAAGTGCCCATaGTTGTATATGGATATGCTCTTCATCTTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: QRNFKTAFSKCP*LYMDMLFIFFK
Trigger: TTTGAAGAAGATGAAGAGCATATCCATATACAACAATGGGCACTTACTGAAGGCCGTCTTAAAGTTACGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 90 bp ACCTGTGACAGGCTTCTATGTCAAACAAACAGGATGCTCTGGTTCTaGTCCATTTTCCTAGCTTATTACGATAAAGAATTTCTGATGATT +
Preference number: 6 (lower is better)
Translates to: TCDRLLCQTNRMLWF*SIFLAYYDKEFLMI
Trigger: AATCATCAGAAATTCTTTATCGTAATAAGCTAGGAAAATGGACAAGAACCAGAGCATCCTGTTTGTTTGACATAGAAGCCTGTCACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS TCA 72 bp TCGGTTCCTGGTTCAGAAAGGCGAGTTTTAGAGACTTaGCGCAAATTTAATAAACGAGAACTAGTATTGATA +
Preference number: 6 (lower is better)
Translates to: SVPGSERRVLET*RKFNKRELVLI
Trigger: TATCAATACTAGTTCTCGTTTATTAAATTTGCGTCAAGTCTCTAAAACTCGCCTTTCTGAACCAGGAACCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS TCA 72 bp TCTTCTCTAACAAGGGAATTATTGTGTTCCAACTCCTaGTCAATTTCATTCTGTAGCTTATCCAACATGAAC +
Preference number: 6 (lower is better)
Translates to: SSLTRELLCSNS*SISFCSLSNMN
Trigger: GTTCATGTTGGATAAGCTACAGAATGAAATTGATCAGGAGTTGGAACACAATAATTCCCTTGTTAGAGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334464.7
CDS CAA 72 bp AGGCTTCTATGTCAAACAAACAGGATGCTCTGGTTCTaGTCCATTTTCCTAGCTTATTACGATAAAGAATTT +
Preference number: 6 (lower is better)
Translates to: RLLCQTNRMLWF*SIFLAYYDKEF
Trigger: AAATTCTTTATCGTAATAAGCTAGGAAAATGGACAAGAACCAGAGCATCCTGTTTGTTTGACATAGAAGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334464.7
ENST00000482496.5
CDS TCA 72 bp TTAATAGAAAGTGTTGTTGGAACACGTTTGGGACTATaGCTTAATGATTGTGCCTCATCTTTGAACTCATTT +
Preference number: 6 (lower is better)
Translates to: LIESVVGTRLGL*LNDCASSLNSF
Trigger: AAATGAGTTCAAAGATGAGGCACAATCATTAAGTCATAGTCCCAAACGTGTTCCAACAACACTTTCTATTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334464.7
ENST00000482496.5
ENST00000489302.5