RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDZD7 (Homo sapiens)

Ensembl gene IDs: ENSG00000186862

Ensembl transcript IDs: ENST00000370215.7, ENST00000470414.1, ENST00000474125.7, ENST00000619208.6, ENST00000642474.1, ENST00000644576.1, ENST00000644782.1, ENST00000645349.1, ENST00000646029.1

Found 807 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCTCCGTCTaGATGGCTGTGTCCGCCCGCCCCCAGCCTGGGCCGCGGCTGCCG +
Preference number: 1 (lower is better)
Translates to: TLHQVSTRPPASGSV*MAVSARPQPGPRLP
Trigger: CGGCAGCCGCGGCCCAGGCTGGGGGCGGGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp TGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCTCCGTCTGCATaGCTGTGTCCGCCCGCCCCCAGCCTGGGCCGCGGCTGCCGGGCT +
Preference number: 1 (lower is better)
Translates to: CTRSPPGLPHRAPSA*LCPPAPSLGRGCRA
Trigger: AGCCCGGCAGCCGCGGCCCAGGCTGGGGGCGGGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR TCA 90 bp CGGCTGCTGCGGCTGCGGCTGCGGCTACGGCTGCGGCTACGGCTCTaGGCCCGGCCCCGGATCTGGCTCTGCGGAGGGTGCTCTCGGCTC +
Preference number: 1 (lower is better)
Translates to: RLLRLRLRLRLRLRL*ARPRIWLCGGCSRL
Trigger: GAGCCGAGAGCACCCTCCGCAGAGCCAGATCCGGGGCCGGGCTCAGAGCCGTAGCCGCAGCCGTAGCCGCAGCCGCAGCCGCAGCAGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp CGCATCGGGCTCCGTCTGCATGGCTGTGTCCGCCCGCCCCCAGCCTaGGCCGCGGCTGCCGGGCTCCTCCTGCCCGAGGCAGATGTCCAT +
Preference number: 1 (lower is better)
Translates to: RIGLRLHGCVRPPPA*AAAAGLLLPEADVH
Trigger: ATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAGCCGCGGCCCAGGCTGGGGGCGGGCGGACACAGCCATGCAGACGGAGCCCGATGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 90 bp ACTTGCCTTGACCCCGGCTGCTGCGGCTGCGGCTGCGGCTACGGCTaGGGCTACGGCTCTGAGCCCGGCCCCGGATCTGGCTCTGCGGAG +
Preference number: 1 (lower is better)
Translates to: TCLDPGCCGCGCGYG*GYGSEPGPGSGSAE
Trigger: CTCCGCAGAGCCAGATCCGGGGCCGGGCTCAGAGCCGTAGCCGCAGCCGTAGCCGCAGCCGCAGCCGCAGCAGCCGGGGTCAAGGCAAGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 90 bp GGGAGCGTCTACCTGGAGACTTGCCTTGACCCCGGCTGCTGCGGCTaGGGCTGCGGCTACGGCTGCGGCTACGGCTCTGAGCCCGGCCCC +
Preference number: 1 (lower is better)
Translates to: GSVYLETCLDPGCCG*GCGYGCGYGSEPGP
Trigger: GGGGCCGGGCTCAGAGCCGTAGCCGCAGCCGTAGCCGCAGCCGCAGCCGCAGCAGCCGGGGTCAAGGCAAGTCTCCAGGTAGACGCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 90 bp GTCTACCTGGAGACTTGCCTTGACCCCGGCTGCTGCGGCTGCGGCTaGGGCTACGGCTGCGGCTACGGCTCTGAGCCCGGCCCCGGATCT +
Preference number: 1 (lower is better)
Translates to: VYLETCLDPGCCGCG*GYGCGYGSEPGPGS
Trigger: AGATCCGGGGCCGGGCTCAGAGCCGTAGCCGCAGCCGTAGCCGCAGCCGCAGCCGCAGCAGCCGGGGTCAAGGCAAGTCTCCAGGTAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 90 bp GGGATGGGGAGCGTCTACCTGGAGACTTGCCTTGACCCCGGCTGCTaGGGCTGCGGCTGCGGCTACGGCTGCGGCTACGGCTCTGAGCCC +
Preference number: 1 (lower is better)
Translates to: GMGSVYLETCLDPGC*GCGCGYGCGYGSEP
Trigger: GGGCTCAGAGCCGTAGCCGCAGCCGTAGCCGCAGCCGCAGCCGCAGCAGCCGGGGTCAAGGCAAGTCTCCAGGTAGACGCTCCCCATCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp TGTCCATGCGGTCCGACGGCAGGGAGCCCGAGCTGTAGGGGGCGCTaGAGGCGCACGAAGAGACGCTGGAGCTGCTCTCAGAGGCCGGGG +
Preference number: 1 (lower is better)
Translates to: CPCGPTAGSPSCRGR*RRTKRRWSCSQRPG
Trigger: CCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCTCGGGCTCCCTGCCGTCGGACCGCATGGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp GTCTTGGGAGACTCAGAGAGCGCAGAGTCAAGGCGGCGGCCGGGATaGGGGCCGTCCGAGCGGATGGCGGTGTCCCTGAGGATGACTGTG +
Preference number: 1 (lower is better)
Translates to: VLGDSESAESRRRPG*GPSERMAVSLRMTV
Trigger: CACAGTCATCCTCAGGGACACCGCCATCCGCTCGGACGGCCCCCATCCCGGCCGCCGCCTTGACTCTGCGCTCTCTGAGTCTCCCAAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp AGAAGCCTCCGCGGCAGGCACGGGGGTGATAAGGTGACGCTTGGGTaGCGTGTCCTGCCGGGCTGGTCTCAAAGCAGGAGGCCGGACTGC +
Preference number: 1 (lower is better)
Translates to: RSLRGRHGGDKVTLG*RVLPGWSQSRRPDC
Trigger: GCAGTCCGGCCTCCTGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGCCGCGGAGGCTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTaGTCTCAAAGCAGGAGGCCGGACTGCCCTGCTCTTGAGGGCCTC +
Preference number: 1 (lower is better)
Translates to: HGGDKVTLGWRVLPG*SQSRRPDCPALEGL
Trigger: GAGGCCCTCAAGAGCAGGGCAGTCCGGCCTCCTGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp CCACCTTGGCTGCCTCCCCATCCAGAGGTCGTGGCAGAGGGGGTCTaGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCATGCTGGGGG +
Preference number: 1 (lower is better)
Translates to: PPWLPPHPEVVAEGV*PSEACGSAHWSCWG
Trigger: CCCCCAGCATGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCACGACCTCTGGATGGGGAGGCAGCCAAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp GGGTGCGGGCTTAGAATCAGGAGTCTGGAGGGCTGGGGAGGGGGCTaGGCTGGGAGTTGGCTGGAGGAGCCTGGCATCAGTGGGAGGAGT +
Preference number: 1 (lower is better)
Translates to: GCGLRIRSLEGWGGG*AGSWLEEPGISGRS
Trigger: ACTCCTCCCACTGATGCCAGGCTCCTCCAGCCAACTCCCAGCCCAGCCCCCTCCCCAGCCCTCCAGACTCCTGATTCTAAGCCCGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR TCA 90 bp CGCTACCCATGGTGGTGCTCTCCAGGCTCAGCCCATTCACCTCCGTaGTCTTGTCCCCCACGCACAGGCCAGCCCGCTCTGCACCACAGG +
Preference number: 1 (lower is better)
Translates to: RYPWWCSPGSAHSPP*SCPPRTGQPALHHR
Trigger: CCTGTGGTGCAGAGCGGGCTGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGCTGAGCCTGGAGAGCACCACCATGGGTAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 90 bp TGCCCGGCACACGGCCCATGCGCCGAACCATCATGTGCAGGCGGCTaGTGCTGGTCAGCACCTTTACGGCGCTACCCATGGTGGTGCTCT +
Preference number: 1 (lower is better)
Translates to: CPAHGPCAEPSCAGG*CWSAPLRRYPWWCS
Trigger: AGAGCACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGGGCCGTGTGCCGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp GCACACGGCCCATGCGCCGAACCATCATGTGCAGGCGGCTGCTGCTaGTCAGCACCTTTACGGCGCTACCCATGGTGGTGCTCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: AHGPCAEPSCAGGCC*SAPLRRYPWWCSPG
Trigger: GCCTGGAGAGCACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGGGCCGTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 90 bp GAGAACTTGATGCCCGGCACACGGCCCATGCGCCGAACCATCATGTaGAGGCGGCTGCTGCTGGTCAGCACCTTTACGGCGCTACCCATG +
Preference number: 1 (lower is better)
Translates to: ENLMPGTRPMRRTIM*RRLLLVSTFTALPM
Trigger: CATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGGGCCGTGTGCCGGGCATCAAGTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 90 bp AGAAGTAGAAGGCCCATCCTCCTTTCCCTAATCTCCCCAGGGCTGTaGCCCTCCCTGGGCTCTGGGACTCTGACTGACCAGGCACGGGGG +
Preference number: 1 (lower is better)
Translates to: RSRRPILLSLISPGL*PSLGSGTLTDQARG
Trigger: CCCCCGTGCCTGGTCAGTCAGAGTCCCAGAGCCCAGGGAGGGGCACAGCCCTGGGGAGATTAGGGAAAGGAGGATGGGCCTTCTACTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
3UTR CCA 90 bp TCACTGTCTTCAGCTCGCCACTGGGGTTCTTCATGGCTGCCTCCTTaGCCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCC +
Preference number: 1 (lower is better)
Translates to: SLSSARHWGSSWLPP*PSPQFHSPRALAWP
Trigger: GGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGGCCAAGGAGGCAGCCATGAAGAACCCCAGTGGCGAGCTGAAGACAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 90 bp GGACAGTGTCACTGTCTTCAGCTCGCCACTGGGGTTCTTCATGGCTaGCTCCTTGGCCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTG +
Preference number: 1 (lower is better)
Translates to: GQCHCLQLATGVLHG*LLGRPLSSTLRGPL
Trigger: CAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGGCCAAGGAGGCAGCCATGAAGAACCCCAGTGGCGAGCTGAAGACAGTGACACTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp TCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATCAAGGGGTTGGTaGGCAGGCAAGTGGTCAGCAGGAAGGCCCCCATCAGTAAGGGCT +
Preference number: 1 (lower is better)
Translates to: SGSQWAGTGAASRGW*AGKWSAGRPPSVRA
Trigger: AGCCCTTACTGATGGGGGCCTTCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp GGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATCAAGGGGTTaGTGGGCAGGCAAGTGGTCAGCAGGAAGGCCCCCATCAGTAAGG +
Preference number: 1 (lower is better)
Translates to: GSGSQWAGTGAASRG*WAGKWSAGRPPSVR
Trigger: CCTTACTGATGGGGGCCTTCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp AGTCTGGGGATTGGTGGGAGGTTCTGGGAGCCAGTGGGCAGGAACTaGAGCAGCATCAAGGGGTTGGTGGGCAGGCAAGTGGTCAGCAGG +
Preference number: 1 (lower is better)
Translates to: SLGIGGRFWEPVGRN*SSIKGLVGRQVVSR
Trigger: CCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp GAGCCTGGCATCAGTGGGAGGAGTCTGGGGATTGGTGGGAGGTTCTaGGAGCCAGTGGGCAGGAACTGGAGCAGCATCAAGGGGTTGGTG +
Preference number: 1 (lower is better)
Translates to: EPGISGRSLGIGGRF*EPVGRNWSSIKGLV
Trigger: CACCAACCCCTTGATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGACTCCTCCCACTGATGCCAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR TCA 90 bp GCCGATTCACCACATCCACCCACGTGGTCTTCTCCTTGGAGAACTTaGTGCCCGGCACACGGCCCATGCGCCGAACCATCATGTGCAGGC +
Preference number: 1 (lower is better)
Translates to: ADSPHPPTWSSPWRT*CPAHGPCAEPSCAG
Trigger: GCCTGCACATGATGGTTCGGCGCATGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGGTGAATCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp CTTGAGGGTTGGCCCTGTCTCCCCATCAATCAGGCCCTCCAGAGCTaGGGACTCTTCCGTCTGTCCCTGACAGCAGCATCCCCTGCCATT +
Preference number: 1 (lower is better)
Translates to: LEGWPCLPINQALQS*GLFRLSLTAASPAI
Trigger: AATGGCAGGGGATGCTGCTGTCAGGGACAGACGGAAGAGTCCCCAGCTCTGGAGGGCCTGATTGATGGGGAGACAGGGCCAACCCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp AGCATGATGTGCGTTTGGCCCTTCAGCACCTCCACGGCCTGGCTGTaGCTGATGTCGTCAAACCTGACACCGTTGGCTGCCAGGACCTGG +
Preference number: 1 (lower is better)
Translates to: SMMCVWPFSTSTAWL*LMSSNLTPLAARTW
Trigger: CCAGGTCCTGGCAGCCAACGGTGTCAGGTTTGACGACATCAGCCACAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp TCTTGGACAGTGTCACTGTCTTCAGCTCGCCACTGGGGTTCTTCATaGCTGCCTCCTTGGCCGTCCCCTCAGTTCCACTCTCCGAGGGCC +
Preference number: 1 (lower is better)
Translates to: SWTVSLSSARHWGSS*LPPWPSPQFHSPRA
Trigger: GGCCCTCGGAGAGTGGAACTGAGGGGACGGCCAAGGAGGCAGCCATGAAGAACCCCAGTGGCGAGCTGAAGACAGTGACACTGTCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp TCCCTCGTGCACATACTTTCTCTATGTCCAGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCAGTGTCCAGGCCTCTCTGCGCCCGT +
Preference number: 1 (lower is better)
Translates to: SLVHILSLCPGEGKF*PGSRCPVSRPLCAR
Trigger: ACGGGCGCAGAGAGGCCTGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGTATGTGCACGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp TGGGCAGGAACTGGAGCAGCATCAAGGGGTTGGTGGGCAGGCAAGTaGTCAGCAGGAAGGCCCCCATCAGTAAGGGCTGATGAGTCAGAG +
Preference number: 1 (lower is better)
Translates to: WAGTGAASRGWWAGK*SAGRPPSVRADESE
Trigger: CTCTGACTCATCAGCCCTTACTGATGGGGGCCTTCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp GGATGCTGGAGTCAGTGGGTGAATCTGAGGTTAGGGGGAGGGTCATaGGATGCGTGGGGAGGGTGCGGGCTTAGAATCAGGAGTCTGGAG +
Preference number: 1 (lower is better)
Translates to: GCWSQWVNLRLGGGS*DAWGGCGLRIRSLE
Trigger: CTCCAGACTCCTGATTCTAAGCCCGCACCCTCCCCACGCATCCCATGACCCTCCCCCTAACCTCAGATTCACCCACTGACTCCAGCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp AGGTTGTGTATAGGTGGACGATGCGCCGGACACCATCTTCTGAGCTaGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCC +
Preference number: 1 (lower is better)
Translates to: RLCIGGRCAGHHLLS*CRRVLNRTSPLPGA
Trigger: GGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCCACCTATACACAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp CGGATGTTGAAGCCCAGGCAGAAGTCGTCGGAGGTTGTGTATAGGTaGACGATGCGCCGGACACCATCTTCTGAGCTGGTGTCGGAGGGT +
Preference number: 1 (lower is better)
Translates to: RMLKPRQKSSEVVYR*TMRRTPSSELVSEG
Trigger: ACCCTCCGACACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCCACCTATACACAACCTCCGACGACTTCTGCCTGGGCTTCAACATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp CAAGCTCCATGGGCTCCCGGGCCTTGTTTCGATAAGCCCGACGGATaGTGTCTACTGCACGCTGGTGGGTCACCTGCTCTAGATTCTCTC +
Preference number: 1 (lower is better)
Translates to: QAPWAPGPCFDKPDG*CLLHAGGSPALDSL
Trigger: GAGAGAATCTAGAGCAGGTGACCCACCAGCGTGCAGTAGACACCATCCGTCGGGCTTATCGAAACAAGGCCCGGGAGCCCATGGAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 90 bp AGGACTGCTTCATCTTGGACAGTGTCACTGTCTTCAGCTCGCCACTaGGGTTCTTCATGGCTGCCTCCTTGGCCGTCCCCTCAGTTCCAC +
Preference number: 1 (lower is better)
Translates to: RTASSWTVSLSSARH*GSSWLPPWPSPQFH
Trigger: GTGGAACTGAGGGGACGGCCAAGGAGGCAGCCATGAAGAACCCCAGTGGCGAGCTGAAGACAGTGACACTGTCCAAGATGAAGCAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 90 bp AGAGTCCTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATaGTGGAGTCAGTGGGTGAATCTGAGGTTAGGGGGAGGGTCATGG +
Preference number: 1 (lower is better)
Translates to: RVLKKLVGEVLGITG*WSQWVNLRLGGGSW
Trigger: CCATGACCCTCCCCCTAACCTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAGGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 90 bp CATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGAATGGATaGATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGG +
Preference number: 1 (lower is better)
Translates to: HPFPCTECCLGLRNG*IDPFRALSESLCPW
Trigger: CCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
3UTR CCA 90 bp GGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTaGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAAGGCCCA +
Preference number: 1 (lower is better)
Translates to: GSGGQELSFREPQCA*KPQLPLVGKEVEGP
Trigger: TGGGCCTTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
3UTR GCA 90 bp AAATGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTaGCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAAGG +
Preference number: 1 (lower is better)
Translates to: KWLWWTRAFLQGTTM*LEATTAPSGERSRR
Trigger: CCTTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
3UTR GCA 90 bp TCTCTCAGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTaGACAGAATGCTGCTTGGGGTTGAGGAATGGATGCATTGACCCC +
Preference number: 1 (lower is better)
Translates to: SLRISGTRKAFHPFP*TECCLGLRNGCIDP
Trigger: GGGGTCAATGCATCCATTCCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
3UTR TCA 90 bp AAATCCAGTAGAATGTCTGAGGTCTTAGTGGACCCCAACGTGAAATaGTCTCTCAGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTT +
Preference number: 1 (lower is better)
Translates to: KSSRMSEVLVDPNVK*SLRISGTRKAFHPF
Trigger: AAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCTGAGAGATCATTTCACGTTGGGGTCCACTAAGACCTCAGACATTCTACTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
3UTR-3UTR TCA 90 bp CTCCACCCGGCCTCCCGCATCGGGCTCCGTCTGCATGGCTGTGTCCGCCCGCCCTCTTCCGTCTGTCCCTaGCAGCAGCATCCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: LHPASRIGLRLHGCVRPPSSVCP*QQHPLP
Trigger: TGGCAGGGGATGCTGCTGTCAGGGACAGACGGAAGA...GGGCGGGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp GACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCTCCGCCGAACCATCATGTaGAGGCGGCTGCTGCTGGTC +
Preference number: 2 (lower is better)
Translates to: DCGPHAAPGLHPASRIGLRRTIM*RRLLLV
Trigger: GACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCG...GAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp GATGACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCCTGACACCGTTGGCTaGCAGGACCTGGTCCCCCAC +
Preference number: 2 (lower is better)
Translates to: DDCGPHAAPGLHPASRIGPDTVG*QDLVPH
Trigger: GTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGG...CCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp GGCTGCCTCCTTGGCCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCGCCCGGCCCCGGATCTaGCTCTGCGGAGGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: GCLLGRPLSSTLRGPLLGARPRI*LCGGCS
Trigger: AGAGCACCCTCCGCAGAGCCAGATCCGGGGCCGGGC...GCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGGCCAAGGAGGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR TCA 90 bp GATGACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGTGTCAGAGCAGGGGCTaGGTGTTCCCAGTGCCTAGG +
Preference number: 2 (lower is better)
Translates to: DDCGPHAAPGLHPASRIGCQSRG*VFPVPR
Trigger: CCTAGGCACTGGGAACACTCAGCCCCTGCTCTGACA...CCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR TCA 90 bp GATGACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGTGCCCCCACGGATGTTaGAGCCCAGGCAGAAGTCGT +
Preference number: 2 (lower is better)
Translates to: DDCGPHAAPGLHPASRIGCPHGC*SPGRSR
Trigger: ACGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCA...CCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp CCTGCCCGAGGCAGATGTCCATGCGGTCCGACGGCAGGGAGCCCGAGCTGTAGGCCGGCACACGGCCCATaGGCCGAACCATCATGTGCA +
Preference number: 2 (lower is better)
Translates to: PARGRCPCGPTAGSPSCRPAHGP*AEPSCA
Trigger: TGCACATGATGGTTCGGCGCATGGGCCGTGTGCCGG...CCTACAGCTCGGGCTCCCTGCCGTCGGACCGCATGGACATCTGCCTCGGGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp GTGGCAGAGGGGGTCTGGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCATGCGTGTCCAGGCCTCTCTaGGCCCGTCCCGCGCTAGCC +
Preference number: 2 (lower is better)
Translates to: VAEGVWPSEACGSAHWSCVSRPL*ARPALA
Trigger: GGCTAGCGCGGGACGGGCGCAGAGAGGCCTGGACAC...GCATGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp GGCTGCCTCCTTGGCCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCGCAGGCGGCTGCTGCTaGTCAGCACCTTTACGGCGC +
Preference number: 2 (lower is better)
Translates to: GCLLGRPLSSTLRGPLLGAGGCC*SAPLRR
Trigger: GCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGC...GCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGGCCAAGGAGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp GTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGCCTCGGCCAGCCCACCATaGTCCACTCTGAGGCCAGAC +
Preference number: 2 (lower is better)
Translates to: VPSVPLSEGPCLAPTLAASASPP*STLRPD
Trigger: GTCTGGCCTCAGAGTGGACCATGGTGGGCTGGCCGA...GGCAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp TCTGGGGATTGGTGGGAGGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATTGCTGCGGCTGCGGCTaGGGCTACGGCTGCGGCTAC +
Preference number: 2 (lower is better)
Translates to: SGDWWEVLGASGQELEQHCCGCG*GYGCGY
Trigger: GTAGCCGCAGCCGTAGCCGCAGCCGCAGCCGCAGCA...ATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR TCA 90 bp GACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCTCTCCCTTAAACCATTCTaGCTTGAGGGTTGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: DCGPHAAPGLHPASRIGLSLKPF*LEGWPC
Trigger: ACAGGGCCAACCCTCAAGTCAGAATGGTTTAAGGGA...GAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp GTGGCAGAGGGGGTCTGGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCATGCAGTCTGATAGGCCCCTaGCCTGCCCTCCGTTACCCC +
Preference number: 2 (lower is better)
Translates to: VAEGVWPSEACGSAHWSCSLIGP*PALRYP
Trigger: GGGGTAACGGAGGGCAGGCCAGGGGCCTATCAGACT...GCATGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp GCAGGAACTGGAGCAGCATCAAGGGGTTGGTGGGCAGGCAAGTGGTCAGCAGGACCGGCCTGTCGAGGATaGCCAGCAGGGGCCTCACCA +
Preference number: 2 (lower is better)
Translates to: AGTGAASRGWWAGKWSAGPACRG*PAGASP
Trigger: TGGTGAGGCCCCTGCTGGCCATCCTCGACAGGCCGG...TCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CAA 90 bp GTCACTGTCTTCAGCTCGCCACTGGGGTTCTTCATGGCTGCCTCCTaGGCCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCC +
Preference number: 2 (lower is better)
Translates to: VTVFSSPLGFFMAAS*AVPSVPLSEGPCLA
Trigger: GGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGGCCAAGGAGGCAGCCATGAAGAACCCCAGTGGCGAGCTGAAGACAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp TCTGGGGATTGGTGGGAGGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATCTGCCGGGCTCCTCCTaGCCGAGGCAGATGTCCATG +
Preference number: 2 (lower is better)
Translates to: SGDWWEVLGASGQELEQHLPGSS*PRQMSM
Trigger: CATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAG...ATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp GTGGCAGAGGGGGTCTGGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCATGCTTGGGTGGCGTGTCCTaGCGGGCTGGTCTCAAAGCA +
Preference number: 2 (lower is better)
Translates to: VAEGVWPSEACGSAHWSCLGGVS*RAGLKA
Trigger: TGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAA...GCATGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp GGGCGCTGGAGGCGCACGAAGAGACGCTGGAGCTGCTCTCAGAGGCCGGGGACATCAGATGGAGCTCCCTaGGGTCAAACTGAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: GRWRRTKRRWSCSQRPGTSDGAP*GQTELL
Trigger: GAGAAGCTCAGTTTGACCCCAGGGAGCTCCATCTGA...TGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp GTGGCAGAGGGGGTCTGGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCATGCTGGGGAGCGTCTACCTaGAGACTTGCCTTGACCCCG +
Preference number: 2 (lower is better)
Translates to: VAEGVWPSEACGSAHWSCWGAST*RLALTP
Trigger: CGGGGTCAAGGCAAGTCTCCAGGTAGACGCTCCCCA...GCATGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR TCA 90 bp TATCTTCCTCTTCCGGGAAGCCGTTCACCGGCAGCAGGTAGAAGCCTCCGCGGCCACCATGGTCCACTCTaGGGCCAGACAGGCGTCAGT +
Preference number: 2 (lower is better)
Translates to: YLPLPGSRSPAAGRSLRGHHGPL*GQTGVS
Trigger: ACTGACGCCTGTCTGGCCTCAGAGTGGACCATGGTG...GCCGCGGAGGCTTCTACCTGCTGCCGGTGAACGGCTTCCCGGAAGAGGAAGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR TCA 90 bp TCTGGGGATTGGTGGGAGGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATACGGGGGTGATAAGGTaGCGCTTGGGTGGCGTGTCC +
Preference number: 2 (lower is better)
Translates to: SGDWWEVLGASGQELEQHTGVIR*RLGGVS
Trigger: GGACACGCCACCCAAGCGTCACCTTATCACCCCCGT...ATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp GTGGCAGAGGGGGTCTGGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCATGCATCCCTTTATGGGGGTaGCGAGGGGCAGAGGCACTT +
Preference number: 2 (lower is better)
Translates to: VAEGVWPSEACGSAHWSCIPLWG*RGAEAL
Trigger: AAGTGCCTCTGCCCCTCGCCACCCCCATAAAGGGAT...GCATGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp GACCACAAGCTCCATGGGCTCCCGGGCCTTGTTTCGATAAGCCCGACGGATGGTCCCATCCAGAGGTCGTaGCAGAGGGGGTCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: DHKLHGLPGLVSISPTDGPIQRS*QRGSGL
Trigger: AAGGCCAGACCCCCTCTGCCACGACCTCTGGATGGG...ACCATCCGTCGGGCTTATCGAAACAAGGCCCGGGAGCCCATGGAGCTTGTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CAA 90 bp CGCCGATTCACCACATCCACCCACGTGGTCTTCTCCTTGGAGAACTaGATGCCCGGCACACGGCCCATGCGCCGAACCATCATGTGCAGG +
Preference number: 2 (lower is better)
Translates to: RRFTTSTHVVFSLEN*MPGTRPMRRTIMCR
Trigger: CCTGCACATGATGGTTCGGCGCATGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGGTGAATCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CAA 90 bp AGGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATCAAGGGGTaGGTGGGCAGGCAAGTGGTCAGCAGGAAGGCCCCCATCAGTAAG +
Preference number: 2 (lower is better)
Translates to: RFWEPVGRNWSSIKG*VGRQVVSRKAPISK
Trigger: CTTACTGATGGGGGCCTTCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR TCA 90 bp GCAGGAACTGGAGCAGCATCAAGGGGTTGGTGGGCAGGCAAGTGGTCAGCAGGAGCCCATTCACCTCCGTaGTCTTGTCCCCCACGCACA +
Preference number: 2 (lower is better)
Translates to: AGTGAASRGWWAGKWSAGAHSPP*SCPPRT
Trigger: TGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGC...TCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp CTTCCTGCCTCAGCCCTCACTTGGACACATAGATGCCCAGGCCAAACTCCTTGCCAGGCCAGCCCGCTCTaGACCACAGGATGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LPASALTWTHRCPGQTPCQASPL*TTGWEW
Trigger: CCACTCCCATCCTGTGGTGCAGAGCGGGCTGGCCTG...GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAGTGAGGGCTGAGGCAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp GGGCCTCACCAGGTCCTCTATGCCTCCCTCGTGCACATACTTTCTCTATGTCCAGCATCGGGCTCCGTCTaGATGGCTGTGTCCGCCCGC +
Preference number: 2 (lower is better)
Translates to: GPHQVLYASLVHILSLCPASGSV*MAVSAR
Trigger: GCGGGCGGACACAGCCATGCAGACGGAGCCCGATGC...TGGACATAGAGAAAGTATGTGCACGAGGGAGGCATAGAGGACCTGGTGAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp CTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCCTCTGCACCACAGGATaGGAGTGGCTGGCATGGGTC +
Preference number: 2 (lower is better)
Translates to: LVSEGVEPHFSTTRRRFTLCTTG*EWLAWV
Trigger: GACCCATGCCAGCCACTCCCATCCTGTGGTGCAGAG...GGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp CTTCCTGCCTCAGCCCTCACTTGGACACATAGATGCCCAGGCCAAACTCCTTGCCGGCGCTACCCATGGTaGTGCTCTCCAGGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: LPASALTWTHRCPGQTPCRRYPW*CSPGSA
Trigger: GGCTGAGCCTGGAGAGCACCACCATGGGTAGCGCCG...GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAGTGAGGGCTGAGGCAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CAA 90 bp GGACGATGCGCCGGACACCATCTTCTGAGCTGGTGTCGGAGGGTGTaGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCACATCCA +
Preference number: 2 (lower is better)
Translates to: GRCAGHHLLSWCRRV*NRTSPLPGADSPHP
Trigger: TGGATGTGGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp CCCCAGCCGCTCCCTCAGCTCCCCATTATCTTCCTCTTCCGGGAAGCCGTTCACAGCATGATGTGCGTTTaGCCCTTCAGCACCTCCACG +
Preference number: 2 (lower is better)
Translates to: PQPLPQLPIIFLFREAVHSMMCV*PFSTST
Trigger: CGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCT...GTGAACGGCTTCCCGGAAGAGGAAGATAATGGGGAGCTGAGGGAGCGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR TCA 90 bp CCCCAGCCGCTCCCTCAGCTCCCCATTATCTTCCTCTTCCGGGAAGCCGTTCACGCTTCTCAATCAGAGTaGGGATTGTCAGAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PQPLPQLPIIFLFREAVHASQSE*GLSEQG
Trigger: CCCCTGCTCTGACAATCCTCACTCTGATTGAGAAGC...GTGAACGGCTTCCCGGAAGAGGAAGATAATGGGGAGCTGAGGGAGCGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp CCCCAGCCGCTCCCTCAGCTCCCCATTATCTTCCTCTTCCGGGAAGCCGTTCACGCTGAGTGTTCCCAGTaGCTAGGGATCTGTCCCTTA +
Preference number: 2 (lower is better)
Translates to: PQPLPQLPIIFLFREAVHAECSQ*LGICPL
Trigger: TAAGGGACAGATCCCTAGGCACTGGGAACACTCAGC...GTGAACGGCTTCCCGGAAGAGGAAGATAATGGGGAGCTGAGGGAGCGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp GCAGGAACTGGAGCAGCATCAAGGGGTTGGTGGGCAGGCAAGTGGTCAGCAGGAGAGGTTGTGTATAGGTaGACGATGCGCCGGACACCA +
Preference number: 2 (lower is better)
Translates to: AGTGAASRGWWAGKWSAGEVVYR*TMRRTP
Trigger: TGGTGTCCGGCGCATCGTCCACCTATACACAACCTC...TCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp TCTGGGGATTGGTGGGAGGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATGATAAGCCCGACGGATaGTGTCTACTGCACGCTGGT +
Preference number: 2 (lower is better)
Translates to: SGDWWEVLGASGQELEQHDKPDG*CLLHAG
Trigger: ACCAGCGTGCAGTAGACACCATCCGTCGGGCTTATC...ATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp GCAGGAACTGGAGCAGCATCAAGGGGTTGGTGGGCAGGCAAGTGGTCAGCAGGACCACATCCACCCACGTaGTCTTCTCCTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: AGTGAASRGWWAGKWSAGPHPPT*SSPWRT
Trigger: AGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGG...TCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp ACCATGGGCTGCACCTTGGACTCAATGCCCCCAGAAATGCTGATACCTAAGGACGGTAGGCACCGGGGATaGGGAGCGTCTACCTGGAGA +
Preference number: 2 (lower is better)
Translates to: TMGCTLDSMPPEMLIPKDGRHRG*GASTWR
Trigger: TCTCCAGGTAGACGCTCCCCATCCCCGGTGCCTACC...GTCCTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp GTGGTGACCAGCAGATGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCAATCTCCCCAGGGCTGTaGCCCTCCCTGGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: VVTSRCDKMALVDKSFPSISPGL*PSLGSG
Trigger: CCCAGAGCCCAGGGAGGGGCACAGCCCTGGGGAGAT...TGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACATCTGCTGGTCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
3UTR-3UTR CCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGAGCTGTAGGGGGCGCTaGAGGCGCACGAAGAGACGC +
Preference number: 2 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGSCRGR*RRTKRR
Trigger: GCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCT...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGCAGCATCAAGGGGTTaGTGGGCAGGCAAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWAASRG*WAGKWS
Trigger: TGACCACTTGCCTGCCCACCAACCCCTTGATGCTGC...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CAA 90 bp GAGTGTTCCCAGTGCCTAGGGATCTGTCCCTTAAACCATTCTGACTaGAGGGTTGGCCCTGTCTCCCCATCAATCAGGCCCTCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: ECSQCLGICPLNHSD*RVGPVSPSIRPSRA
Trigger: AGCTCTGGAGGGCCTGATTGATGGGGAGACAGGGCCAACCCTCAAGTCAGAATGGTTTAAGGGACAGATCCCTAGGCACTGGGAACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR TCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGCCAGGCCTCACTTGCTaGCCATCCCCACATCCCAGC +
Preference number: 2 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGPGLTC*PSPHPS
Trigger: GCTGGGATGTGGGGATGGTCAGCAAGTGAGGCCTGG...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR TCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGAGCAGTGAGTGCAGGTaGCACAGGCTGCCCACTAGC +
Preference number: 2 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGSSECR*HRLPTS
Trigger: GCTAGTGGGCAGCCTGTGTCACCTGCACTCACTGCT...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
3UTR-3UTR GCA 90 bp ACCATGGGCTGCACCTTGGACTCAATGCCCCCAGAAATGCTGATACCTAAGGACTGTATAGGTGGACGATaGGCCGGACACCATCTTCTG +
Preference number: 2 (lower is better)
Translates to: TMGCTLDSMPPEMLIPKDCIGGR*AGHHLL
Trigger: CAGAAGATGGTGTCCGGCGCATCGTCCACCTATACA...GTCCTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp ACCATGGGCTGCACCTTGGACTCAATGCCCCCAGAAATGCTGATACCTAAGGACCACCATCTTCTGAGCTaGTGTCGGAGGGTGTTGAAC +
Preference number: 2 (lower is better)
Translates to: TMGCTLDSMPPEMLIPKDHHLLS*CRRVLN
Trigger: GTTCAACACCCTCCGACACCAGCTCAGAAGATGGTG...GTCCTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTCATGTGCAGGCGGCTaGTGCTGGTCAGCACCTTTA +
Preference number: 2 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGSCAGG*CWSAPL
Trigger: TAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGA...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR GCA 90 bp ACCATGGGCTGCACCTTGGACTCAATGCCCCCAGAAATGCTGATACCTAAGGACACTTGGACACATAGATaGCCAGGCCAAACTCCTTGC +
Preference number: 2 (lower is better)
Translates to: TMGCTLDSMPPEMLIPKDTWTHR*PGQTPC
Trigger: GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAGT...GTCCTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR TCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTTTATTTGTGTTTGTaGCCAAGCAGCCTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWVYLCL*PSSLSL
Trigger: AAGGGAGAGGCTGCTTGGTCACAAACACAAATAAAC...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
3UTR-3UTR CCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGTAATCCTAGCACTTTaGGAGACTAAGGCGGGTAGA +
Preference number: 2 (lower is better)
Translates to: SSDLAASASRVVGIGQVWVILAL*ETKAGR
Trigger: TCTACCCGCCTTAGTCTCCCAAAGTGCTAGGATTAC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
3UTR-3UTR GCA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTGACAGCAGCATCCCCTaGCATTCACTGAGATTGGAG +
Preference number: 2 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSDSSIP*HSLRLE
Trigger: CTCCAATCTCAGTGAATGGCAGGGGATGCTGCTGTC...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTGTAATCCTAGCACTTTaGGAGACTAAGGCGGGTAGA +
Preference number: 2 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFVILAL*ETKAGR
Trigger: TCTACCCGCCTTAGTCTCCCAAAGTGCTAGGATTAC...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370215.7
3UTR GCA 72 bp GACCCCGGCTGCTGCGGCTGCGGCTGCGGCTACGGCTaGGGCTACGGCTCTGAGCCCGGCCCCGGATCTGGC +
Preference number: 3 (lower is better)
Translates to: DPGCCGCGCGYG*GYGSEPGPGSG
Trigger: GCCAGATCCGGGGCCGGGCTCAGAGCCGTAGCCGCAGCCGTAGCCGCAGCCGCAGCCGCAGCAGCCGGGGTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp CTCCGTCTGCATGGCTGTGTCCGCCCGCCCCCAGCCTaGGCCGCGGCTGCCGGGCTCCTCCTGCCCGAGGCA +
Preference number: 3 (lower is better)
Translates to: LRLHGCVRPPPA*AAAAGLLLPEA
Trigger: TGCCTCGGGCAGGAGGAGCCCGGCAGCCGCGGCCCAGGCTGGGGGCGGGCGGACACAGCCATGCAGACGGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp TCTCCACCCGGCCTCCCGCATCGGGCTCCGTCTGCATaGCTGTGTCCGCCCGCCCCCAGCCTGGGCCGCGGC +
Preference number: 3 (lower is better)
Translates to: SPPGLPHRAPSA*LCPPAPSLGRG
Trigger: GCCGCGGCCCAGGCTGGGGGCGGGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp CAGGTCTCCACCCGGCCTCCCGCATCGGGCTCCGTCTaGATGGCTGTGTCCGCCCGCCCCCAGCCTGGGCCG +
Preference number: 3 (lower is better)
Translates to: QVSTRPPASGSV*MAVSARPQPGP
Trigger: CGGCCCAGGCTGGGGGCGGGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAGACCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp GGCTGCCGGGCTCCTCCTGCCCGAGGCAGATGTCCATaGGGTCCGACGGCAGGGAGCCCGAGCTGTAGGGGG +
Preference number: 3 (lower is better)
Translates to: GCRAPPARGRCP*GPTAGSPSCRG
Trigger: CCCCCTACAGCTCGGGCTCCCTGCCGTCGGACCGCATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp GAGACTTGCCTTGACCCCGGCTGCTGCGGCTGCGGCTaGGGCTACGGCTGCGGCTACGGCTCTGAGCCCGGC +
Preference number: 3 (lower is better)
Translates to: ETCLDPGCCGCG*GYGCGYGSEPG
Trigger: GCCGGGCTCAGAGCCGTAGCCGCAGCCGTAGCCGCAGCCGCAGCCGCAGCAGCCGGGGTCAAGGCAAGTCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp GGTCCGACGGCAGGGAGCCCGAGCTGTAGGGGGCGCTaGAGGCGCACGAAGAGACGCTGGAGCTGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: GPTAGSPSCRGR*RRTKRRWSCSQ
Trigger: CTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCTCGGGCTCCCTGCCGTCGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp TACCTGGAGACTTGCCTTGACCCCGGCTGCTGCGGCTaGGGCTGCGGCTACGGCTGCGGCTACGGCTCTGAG +
Preference number: 3 (lower is better)
Translates to: YLETCLDPGCCG*GCGYGCGYGSE
Trigger: CTCAGAGCCGTAGCCGCAGCCGTAGCCGCAGCCGCAGCCGCAGCAGCCGGGGTCAAGGCAAGTCTCCAGGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp CGCGGCAGGCACGGGGGTGATAAGGTGACGCTTGGGTaGCGTGTCCTGCCGGGCTGGTCTCAAAGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: RGRHGGDKVTLG*RVLPGWSQSRR
Trigger: CCTCCTGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGCCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CAA 90 bp GATGACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGTACCGGCCGGTCTCCTaGATGGTCAGCATGATGTGC +
Preference number: 3 (lower is better)
Translates to: DDCGPHAAPGLHPASRIGYRPVS*MVSMMC
Trigger: GCACATCATGCTGACCATCAAGGAGACCGGCCGGTA...CCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp ATGCCCGGCACACGGCCCATGCGCCGAACCATCATGTaGAGGCGGCTGCTGCTGGTCAGCACCTTTACGGCG +
Preference number: 3 (lower is better)
Translates to: MPGTRPMRRTIM*RRLLLVSTFTA
Trigger: CGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGGGCCGTGTGCCGGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CAA 90 bp GGCTGCCTCCTTGGCCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCACCAGTCAAGGTCCTaGACCCTCCTACTGGGGCCT +
Preference number: 3 (lower is better)
Translates to: GCLLGRPLSSTLRGPLLGHQSRS*TLLLGP
Trigger: AGGCCCCAGTAGGAGGGTCAAGGACCTTGACTGGTG...GCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGGCCAAGGAGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CAA 90 bp CCTGCCCGAGGCAGATGTCCATGCGGTCCGACGGCAGGGAGCCCGAGCTGTAGGCAGCATGATGTGCGTTaGGCCCTTCAGCACCTCCAC +
Preference number: 3 (lower is better)
Translates to: PARGRCPCGPTAGSPSCRQHDVR*ALQHLH
Trigger: GTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTG...CCTACAGCTCGGGCTCCCTGCCGTCGGACCGCATGGACATCTGCCTCGGGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CAA 90 bp CCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGCCCTGCCGCCCTCCCTaGAAGAAGAGGTTCATCAGC +
Preference number: 3 (lower is better)
Translates to: PSPQFHSPRALAWPPPWLPCRPP*KKRFIS
Trigger: GCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGG...CAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR TCA 72 bp TGGTGGTGCTCTCCAGGCTCAGCCCATTCACCTCCGTaGTCTTGTCCCCCACGCACAGGCCAGCCCGCTCTG +
Preference number: 3 (lower is better)
Translates to: WWCSPGSAHSPP*SCPPRTGQPAL
Trigger: CAGAGCGGGCTGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGCTGAGCCTGGAGAGCACCACCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp CACGGCCCATGCGCCGAACCATCATGTGCAGGCGGCTaGTGCTGGTCAGCACCTTTACGGCGCTACCCATGG +
Preference number: 3 (lower is better)
Translates to: HGPCAEPSCAGG*CWSAPLRRYPW
Trigger: CCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGGGCCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp CTGCCTCCCCATCCAGAGGTCGTGGCAGAGGGGGTCTaGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCA +
Preference number: 3 (lower is better)
Translates to: LPPHPEVVAEGV*PSEACGSAHWS
Trigger: TGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCACGACCTCTGGATGGGGAGGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp CTGACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTaGCGTGTCCTGCCGGGCTGGTCTCAAAGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: LTRHGGDKVTLG*RVLPGWSQSRR
Trigger: CCTCCTGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGTCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
3UTR TCA 72 bp TGCCATTCTCCTCGGCCAGCCCACCATGGTCCACTCTaGGGCCAGACAGGCGTCAGTCTGATAGGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: CHSPRPAHHGPL*GQTGVSLIGPW
Trigger: CCAGGGGCCTATCAGACTGACGCCTGTCTGGCCTCAGAGTGGACCATGGTGGGCTGGCCGAGGAGAATGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp GGCTGCTGCTGGTCAGCACCTTTACGGCGCTACCCATaGTGGTGCTCTCCAGGCTCAGCCCATTCACCTCCG +
Preference number: 3 (lower is better)
Translates to: GCCWSAPLRRYP*WCSPGSAHSPP
Trigger: CGGAGGTGAATGGGCTGAGCCTGGAGAGCACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp CCATGCGCCGAACCATCATGTGCAGGCGGCTGCTGCTaGTCAGCACCTTTACGGCGCTACCCATGGTGGTGC +
Preference number: 3 (lower is better)
Translates to: PCAEPSCAGGCC*SAPLRRYPWWC
Trigger: GCACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp CGGCCGGTCTCCTTGATGGTCAGCATGATGTGCGTTTaGCCCTTCAGCACCTCCACGGCCTGGCTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: RPVSLMVSMMCV*PFSTSTAWLWL
Trigger: CAGCCACAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTGACCATCAAGGAGACCGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp GATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTaGTCTCAAAGCAGGAGGCCGGACTGCCCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: DKVTLGWRVLPG*SQSRRPDCPAL
Trigger: AAGAGCAGGGCAGTCCGGCCTCCTGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
3UTR CCA 72 bp TCAGCTCGCCACTGGGGTTCTTCATGGCTGCCTCCTTaGCCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTT +
Preference number: 3 (lower is better)
Translates to: SARHWGSSWLPP*PSPQFHSPRAL
Trigger: AAGGGCCCTCGGAGAGTGGAACTGAGGGGACGGCCAAGGAGGCAGCCATGAAGAACCCCAGTGGCGAGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp GGAGCCTGGCATCAGTGGGAGGAGTCTGGGGATTGGTaGGAGGTTCTGGGAGCCAGTGGGCAGGAACTGGAG +
Preference number: 3 (lower is better)
Translates to: GAWHQWEESGDW*EVLGASGQELE
Trigger: CTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGACTCCTCCCACTGATGCCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp GGATACCGGCCGGTCTCCTTGATGGTCAGCATGATGTaGGTTTGGCCCTTCAGCACCTCCACGGCCTGGCTG +
Preference number: 3 (lower is better)
Translates to: GYRPVSLMVSMM*VWPFSTSTAWL
Trigger: CAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTGACCATCAAGGAGACCGGCCGGTATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp TGGCCCTGTCTCCCCATCAATCAGGCCCTCCAGAGCTaGGGACTCTTCCGTCTGTCCCTGACAGCAGCATCC +
Preference number: 3 (lower is better)
Translates to: WPCLPINQALQS*GLFRLSLTAAS
Trigger: GGATGCTGCTGTCAGGGACAGACGGAAGAGTCCCCAGCTCTGGAGGGCCTGATTGATGGGGAGACAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp TGCGTTTGGCCCTTCAGCACCTCCACGGCCTGGCTGTaGCTGATGTCGTCAAACCTGACACCGTTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: CVWPFSTSTAWL*LMSSNLTPLAA
Trigger: GGCAGCCAACGGTGTCAGGTTTGACGACATCAGCCACAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp CAGTGGGCAGGAACTGGAGCAGCATCAAGGGGTTGGTaGGCAGGCAAGTGGTCAGCAGGAAGGCCCCCATCA +
Preference number: 3 (lower is better)
Translates to: QWAGTGAASRGW*AGKWSAGRPPS
Trigger: TGATGGGGGCCTTCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGCCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CAA 90 bp GACCACAAGCTCCATGGGCTCCCGGGCCTTGTTTCGATAAGCCCGACGGATGGTTTCACCTCCGTGATCTaGTCCCCCACGCACAGGCCA +
Preference number: 3 (lower is better)
Translates to: DHKLHGLPGLVSISPTDGFTSVI*SPTHRP
Trigger: TGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAA...ACCATCCGTCGGGCTTATCGAAACAAGGCCCGGGAGCCCATGGAGCTTGTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR TCA 72 bp CCACATCCACCCACGTGGTCTTCTCCTTGGAGAACTTaGTGCCCGGCACACGGCCCATGCGCCGAACCATCA +
Preference number: 3 (lower is better)
Translates to: PHPPTWSSPWRT*CPAHGPCAEPS
Trigger: TGATGGTTCGGCGCATGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp CACTGTCTTCAGCTCGCCACTGGGGTTCTTCATGGCTaGCTCCTTGGCCGTCCCCTCAGTTCCACTCTCCGA +
Preference number: 3 (lower is better)
Translates to: HCLQLATGVLHG*LLGRPLSSTLR
Trigger: TCGGAGAGTGGAACTGAGGGGACGGCCAAGGAGGCAGCCATGAAGAACCCCAGTGGCGAGCTGAAGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp TGGGCTCCCGGGCCTTGTTTCGATAAGCCCGACGGATaGTGTCTACTGCACGCTGGTGGGTCACCTGCTCTA +
Preference number: 3 (lower is better)
Translates to: WAPGPCFDKPDG*CLLHAGGSPAL
Trigger: TAGAGCAGGTGACCCACCAGCGTGCAGTAGACACCATCCGTCGGGCTTATCGAAACAAGGCCCGGGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CAA 90 bp CTTCTGAGCTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCCACGTGGTCTTCTCCTaGGAGAACTTGATGCCCGGC +
Preference number: 3 (lower is better)
Translates to: LLSWCRRVLNRTSPLPGAHVVFS*ENLMPG
Trigger: GCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTG...GGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR TCA 72 bp AGGCCCTCCAGAGCTGGGGACTCTTCCGTCTGTCCCTaGCAGCAGCATCCCCTGCCATTCACTGAGATTGGA +
Preference number: 3 (lower is better)
Translates to: RPSRAGDSSVCP*QQHPLPFTEIG
Trigger: TCCAATCTCAGTGAATGGCAGGGGATGCTGCTGTCAGGGACAGACGGAAGAGTCCCCAGCTCTGGAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp GGCAGAAGTCGTCGGAGGTTGTGTATAGGTGGACGATaGGCCGGACACCATCTTCTGAGCTGGTGTCGGAGG +
Preference number: 3 (lower is better)
Translates to: GRSRRRLCIGGR*AGHHLLSWCRR
Trigger: CCTCCGACACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCCACCTATACACAACCTCCGACGACTTCTGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp GCTGTGGCTGATGTCGTCAAACCTGACACCGTTGGCTaGCAGGACCTGGTCCCCCACCTTGATGCCATTCTC +
Preference number: 3 (lower is better)
Translates to: AVADVVKPDTVG*QDLVPHLDAIL
Trigger: GAGAATGGCATCAAGGTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTTGACGACATCAGCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp ACTGGAGCAGCATCAAGGGGTTGGTGGGCAGGCAAGTaGTCAGCAGGAAGGCCCCCATCAGTAAGGGCTGAT +
Preference number: 3 (lower is better)
Translates to: TGAASRGWWAGK*SAGRPPSVRAD
Trigger: ATCAGCCCTTACTGATGGGGGCCTTCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp ATCAGTGGGAGGAGTCTGGGGATTGGTGGGAGGTTCTaGGAGCCAGTGGGCAGGAACTGGAGCAGCATCAAG +
Preference number: 3 (lower is better)
Translates to: ISGRSLGIGGRF*EPVGRNWSSIK
Trigger: CTTGATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGACTCCTCCCACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp AGTCAGTGGGTGAATCTGAGGTTAGGGGGAGGGTCATaGGATGCGTGGGGAGGGTGCGGGCTTAGAATCAGG +
Preference number: 3 (lower is better)
Translates to: SQWVNLRLGGGS*DAWGGCGLRIR
Trigger: CCTGATTCTAAGCCCGCACCCTCCCCACGCATCCCATGACCCTCCCCCTAACCTCAGATTCACCCACTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp AAGCCCAGGCAGAAGTCGTCGGAGGTTGTGTATAGGTaGACGATGCGCCGGACACCATCTTCTGAGCTGGTG +
Preference number: 3 (lower is better)
Translates to: KPRQKSSEVVYR*TMRRTPSSELV
Trigger: CACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCCACCTATACACAACCTCCGACGACTTCTGCCTGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp TCATCTTGGACAGTGTCACTGTCTTCAGCTCGCCACTaGGGTTCTTCATGGCTGCCTCCTTGGCCGTCCCCT +
Preference number: 3 (lower is better)
Translates to: SSWTVSLSSARH*GSSWLPPWPSP
Trigger: AGGGGACGGCCAAGGAGGCAGCCATGAAGAACCCCAGTGGCGAGCTGAAGACAGTGACACTGTCCAAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR TCA 72 bp CCCTGGAGGCTTGGGCGACTCATAAGGGACAGCATGTaGGAAAGTGCCCACCAATCCCAAGCTCCAGACCTT +
Preference number: 3 (lower is better)
Translates to: PWRLGRLIRDSM*ESAHQSQAPDL
Trigger: AAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGCCCAAGCCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
3UTR CCA 72 bp ATAGGTGGACGATGCGCCGGACACCATCTTCTGAGCTaGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTA +
Preference number: 3 (lower is better)
Translates to: IGGRCAGHHLLS*CRRVLNRTSPL
Trigger: TAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCCACCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp TTCTACCCGAAGACACTTCCTGCCTCAGCCCTCACTTaGACACATAGATGCCCAGGCCAAACTCCTTGCCCC +
Preference number: 3 (lower is better)
Translates to: FYPKTLPASALT*THRCPGQTPCP
Trigger: GGGGCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAGTGAGGGCTGAGGCAGGAAGTGTCTTCGGGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CCA 72 bp CACATACTTTCTCTATGTCCAGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCAGTGTCCAGGCCTCTC +
Preference number: 3 (lower is better)
Translates to: HILSLCPGEGKF*PGSRCPVSRPL
Trigger: GAGAGGCCTGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGTATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR-3UTR CAA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGTGGTGTCGGAGGGTGTaGAACCGCACTTCTCCACTA +
Preference number: 3 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWWCRRV*NRTSPL
Trigger: TAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCA...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp CCTTGCACAGAATGCTGCTTGGGGTTGAGGAATGGATaGATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTG +
Preference number: 3 (lower is better)
Translates to: PCTECCLGLRNG*IDPFRALSESL
Trigger: CAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCCTCAACCCCAAGCAGCATTCTGTGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
3UTR-3UTR CAA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTCTCCTTGGAGAACTaGATGCCCGGCACACGGCCC +
Preference number: 3 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGFSLEN*MPGTRP
Trigger: GGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAA...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATaGTGGAGTCAGTGGGTGAATCTGAGGTTAGGGGGA +
Preference number: 3 (lower is better)
Translates to: KKLVGEVLGITG*WSQWVNLRLGG
Trigger: TCCCCCTAACCTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
3UTR TCA 72 bp TTCCCAGTGCCTAGGGATCTGTCCCTTAAACCATTCTaGCTTGAGGGTTGGCCCTGTCTCCCCATCAATCAG +
Preference number: 3 (lower is better)
Translates to: FPVPRDLSLKPF*LEGWPCLPINQ
Trigger: CTGATTGATGGGGAGACAGGGCCAACCCTCAAGTCAGAATGGTTTAAGGGACAGATCCCTAGGCACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR TCA 72 bp TTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTaGGGAATGGATGCATTGACCCCTTCAGGGCCCTGT +
Preference number: 3 (lower is better)
Translates to: FIRFLAQNAAWG*GMDALTPSGPC
Trigger: ACAGGGCCCTGAAGGGGTCAATGCATCCATTCCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
3UTR CCA 72 bp GGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTaGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTA +
Preference number: 3 (lower is better)
Translates to: GQELSFREPQCA*KPQLPLVGKEV
Trigger: TACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
3UTR TCA 72 bp CTTCTCAATCAGAGTGAGGATTGTCAGAGCAGGGGCTaGGTGTTCCCAGTGCCTAGGGATCTGTCCCTTAAA +
Preference number: 3 (lower is better)
Translates to: LLNQSEDCQSRG*VFPVPRDLSLK
Trigger: TTTAAGGGACAGATCCCTAGGCACTGGGAACACTCAGCCCCTGCTCTGACAATCCTCACTCTGATTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR GCA 72 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATaGTGCTTGGGGTTGAGGAATGGATGCATTGACCCC +
Preference number: 3 (lower is better)
Translates to: TRKAFHPFPCTE*CLGLRNGCIDP
Trigger: GGGGTCAATGCATCCATTCCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
3UTR GCA 72 bp ATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTaGACAGAATGCTGCTTGGGGTTGAGGAATGGATGC +
Preference number: 3 (lower is better)
Translates to: ISGTRKAFHPFP*TECCLGLRNGC
Trigger: GCATCCATTCCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
3UTR-3UTR CAA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTTGGGCTCAAGTGATCTaGCTGCTTCAGCTTCCAGAG +
Preference number: 3 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFWAQVI*LLQLPE
Trigger: CTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCCCA...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR GCA 90 bp CTCCACCCGGCCTCCCGCATCGGGCTCCGTCTGCATGGCTGTGTCCGCCCGCCCAAGATGCCCAGGCCATaGTCTGAGCCCCCGCGCACG +
Preference number: 4 (lower is better)
Translates to: LHPASRIGLRLHGCVRPPKMPRP*SEPPRT
Trigger: CGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTT...GGGCGGGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GATGACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGGCCCGGCCCCGGATCTaGCTCTGCGGAGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: DDCGPHAAPGLHPASRIGARPRI*LCGGCS
Trigger: AGAGCACCCTCCGCAGAGCCAGATCCGGGGCCGGGC...CCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGCCGCCCAGGCCATGCTCTaGGCCCCCGCGCACGCTGAA +
Preference number: 4 (lower is better)
Translates to: VPSVPLSEGPCLAPTLAAAQAML*APAHAE
Trigger: TTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGC...GGCAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp CTCCACCCGGCCTCCCGCATCGGGCTCCGTCTGCATGGCTGTGTCCGCCCGCCCCCTGCCGCCCTCCCTTaGAGAAGAGGTTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: LHPASRIGLRLHGCVRPPPAALP*RRGSSA
Trigger: CGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGG...GGGCGGGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGTGCTGCGGCTGCGGCTaGGGCTACGGCTGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: PSPQFHSPRALAWPPPWLCCGCG*GYGCGY
Trigger: GTAGCCGCAGCCGTAGCCGCAGCCGCAGCCGCAGCA...CAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCTCGGGCTGGGAGTTGGCTaGAGGAGCCTGGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: DCGPHAAPGLHPASRIGLGLGVG*RSLASV
Trigger: CACTGATGCCAGGCTCCTCCAGCCAACTCCCAGCCC...GAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CCTGCCCGAGGCAGATGTCCATGCGGTCCGACGGCAGGGAGCCCGAGCTGTAGGTGGAGCCTGAGTCGCTaGCTAGGTGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: PARGRCPCGPTAGSPSCRWSLSR*LGGLGR
Trigger: CCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCA...CCTACAGCTCGGGCTCCCTGCCGTCGGACCGCATGGACATCTGCCTCGGGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CCTGCCCGAGGCAGATGTCCATGCGGTCCGACGGCAGGGAGCCCGAGCTGTAGGCGAGGCAGATGTCCATaGGGTCCGACGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PARGRCPCGPTAGSPSCRRGRCP*GPTAGS
Trigger: GCTCCCTGCCGTCGGACCGCATGGACATCTGCCTCG...CCTACAGCTCGGGCTCCCTGCCGTCGGACCGCATGGACATCTGCCTCGGGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GGCGCTGGAGGCGCACGAAGAGACGCTGGAGCTGCTCTCAGAGGCCGGGGACAGCGGCGCTACCCATGGTaGTGCTCTCCAGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GAGGARRDAGAALRGRGQRRYPW*CSPGSA
Trigger: GGCTGAGCCTGGAGAGCACCACCATGGGTAGCGCCG...CTGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GATGACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGTCGGCCAGCCCACCATaGTCCACTCTGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: DDCGPHAAPGLHPASRIGSASPP*STLRPD
Trigger: GTCTGGCCTCAGAGTGGACCATGGTGGGCTGGCCGA...CCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GTGGCAGAGGGGGTCTGGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCATGCGCGTCCCATGGGCGATaGGGCTCGGATTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: VAEGVWPSEACGSAHWSCASHGR*GSDSAG
Trigger: CCCCGCGGAATCCGAGCCTCATCGCCCATGGGACGC...GCATGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GATGACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGGCCCATTCACCTCCGTaGTCTTGTCCCCCACGCACA +
Preference number: 4 (lower is better)
Translates to: DDCGPHAAPGLHPASRIGAHSPP*SCPPRT
Trigger: TGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGC...CCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GATGACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGACCAGTCAAGGTCCTTaGCCCTCCTACTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: DDCGPHAAPGLHPASRIGTSQGP*PSYWGL
Trigger: GAGGCCCCAGTAGGAGGGTCAAGGACCTTGACTGGT...CCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CTCCACCCGGCCTCCCGCATCGGGCTCCGTCTGCATGGCTGTGTCCGCCCGCCCGTGAAGGCCCTCGCTTaGGATGCCTCTCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LHPASRIGLRLHGCVRPPVKALA*DASQKC
Trigger: ACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCAC...GGGCGGGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGCCCACTGCGAAACCCTaGGCCATGGCGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWPTAKP*AMAAGL
Trigger: TAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGG...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGCGAGGCAGATGTCCATaGGGTCCGACGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWRGRCP*GPTAGS
Trigger: GCTCCCTGCCGTCGGACCGCATGGACATCTGCCTCG...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAACTGTGGGCCGCACGCTaGACCAGGTCTCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQLWAAR*TRSPPG
Trigger: GCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAG...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR GCA 90 bp GTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGCCGATAGGCCCCTGGCCTaGCCTCCGTTACCCCACTCC +
Preference number: 4 (lower is better)
Translates to: VPSVPLSEGPCLAPTLAADRPLA*PPLPHS
Trigger: GGAGTGGGGTAACGGAGGGCAGGCCAGGGGCCTATC...GGCAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGCGGCGCTACCCATGGTaGTGCTCTCCAGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWRRYPW*CSPGSA
Trigger: GGCTGAGCCTGGAGAGCACCACCATGGGTAGCGCCG...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp GACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCTCGAGTCTGGGGATTGGTaGGAGGTTCTGGGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: DCGPHAAPGLHPASRIGLESGDW*EVLGAS
Trigger: ACTGGCTCCCAGAACCTCCCACCAATCCCCAGACTC...GAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAGAGGCCGGGGACAGCTaGTGCAGCACCCCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQEAGDS*CSTPLL
Trigger: GAGCAACGGGGTGCTGCAGCAGCTGTCCCCGGCCTC...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR GCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAGCATCGGGCTCCGTCTaGATGGCTGTGTCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQASGSV*MAVSAR
Trigger: GCGGGCGGACACAGCCATGCAGACGGAGCCCGATGC...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR GCA 90 bp CCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGAGCGTCTTGGAGCGCTaGAGGGCACCCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSPQFHSPRALAWPPPWLSVLER*RAPFSP
Trigger: TGGGGAGAAGGGTGCCCTGCAGCGCTCCAAGACGCT...CAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGAGCGTCTTGGAGCGCTaGAGGGCACCCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWSVLER*RAPFSP
Trigger: TGGGGAGAAGGGTGCCCTGCAGCGCTCCAAGACGCT...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp CTCCACCCGGCCTCCCGCATCGGGCTCCGTCTGCATGGCTGTGTCCGCCCGCCCGACAGCAGCATCCCCTaGCATTCACTGAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: LHPASRIGLRLHGCVRPPDSSIP*HSLRLE
Trigger: CTCCAATCTCAGTGAATGGCAGGGGATGCTGCTGTC...GGGCGGGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp GATGACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCCCGAAGACACTTCCTaGCTCAGCCCTCACTTGGAC +
Preference number: 4 (lower is better)
Translates to: DDCGPHAAPGLHPASRIGPEDTS*LSPHLD
Trigger: GTCCAAGTGAGGGCTGAGGCAGGAAGTGTCTTCGGG...CCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAATCTCCCCAGGGCTGTaGCCCTCCCTGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQISPGL*PSLGSG
Trigger: CCCAGAGCCCAGGGAGGGGCACAGCCCTGGGGAGAT...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp GGGCGCTGGAGGCGCACGAAGAGACGCTGGAGCTGCTCTCAGAGGCCGGGGACAGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GRWRRTKRRWSCSQRPGTGEGKF*PGSRCP
Trigger: TGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCC...TGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GGGCGCTGGAGGCGCACGAAGAGACGCTGGAGCTGCTCTCAGAGGCCGGGGACAGAGGAGTCTGGGGATTaGTGGGAGGTTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GRWRRTKRRWSCSQRPGTEESGD*WEVLGA
Trigger: GGCTCCCAGAACCTCCCACCAATCCCCAGACTCCTC...TGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGCCAGCAGTGAGTGCAGGTaGCACAGGCTGCCCACTAGC +
Preference number: 4 (lower is better)
Translates to: VPSVPLSEGPCLAPTLAASSECR*HRLPTS
Trigger: GCTAGTGGGCAGCCTGTGTCACCTGCACTCACTGCT...GGCAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAAAGATGCCCAGGCCATaGTCTGAGCCCCCGCGCACG +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQKMPRP*SEPPRT
Trigger: CGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTT...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR GCA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGCAGCCCGCTCTGCACTaGTGCCTTCCTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWQPALH*CLPPLC
Trigger: GCAAAGTGGAGGAAGGCAGCAGTGCAGAGCGGGCTG...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp CTTCTGAGCTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCCTGTGGGCCGCACGCTaGACCAGGTCTCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: LLSWCRRVLNRTSPLPGALWAAR*TRSPPG
Trigger: GCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAG...GGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CTCCAGAGCTGGGGACTCTTCCGTCTGTCCCTGACAGCAGCATCCCCTGCCATTGTGTCCAGGCCTCTCTaGGCCCGTCCCGCGCTAGCC +
Preference number: 4 (lower is better)
Translates to: LQSWGLFRLSLTAASPAIVSRPL*ARPALA
Trigger: GGCTAGCGCGGGACGGGCGCAGAGAGGCCTGGACAC...AATGGCAGGGGATGCTGCTGTCAGGGACAGACGGAAGAGTCCCCAGCTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGAGCTCGAAGCCAGCCTaGAGGGCCCCACTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PSPQFHSPRALAWPPPWLSSKPA*RAPLRK
Trigger: TTTCCTCAGTGGGGCCCTGCAGGCTGGCTTCGAGCT...CAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAGCAGGCGGCTGCTGCTaGTCAGCACCTTTACGGCGC +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQAGGCC*SAPLRR
Trigger: GCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGC...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR CCA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWGEGKF*PGSRCP
Trigger: TGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCC...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp GTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGCCCTCTGCACCACAGGATaGGAGTGGCTGGCATGGGTC +
Preference number: 4 (lower is better)
Translates to: VPSVPLSEGPCLAPTLAALCTTG*EWLAWV
Trigger: GACCCATGCCAGCCACTCCCATCCTGTGGTGCAGAG...GGCAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp CCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGTCATGGCTGCCTCCTTaGCCGTCCCCTCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: PSPQFHSPRALAWPPPWLSWLPP*PSPQFH
Trigger: GTGGAACTGAGGGGACGGCCAAGGAGGCAGCCATGA...CAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CAA 72 bp GAGCCAGTGGGCAGGAACTGGAGCAGCATCAAGGGGTaGGTGGGCAGGCAAGTGGTCAGCAGGAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: EPVGRNWSSIKG*VGRQVVSRKAP
Trigger: GGGGGCCTTCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGCCCACTGGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp CTCCACCCGGCCTCCCGCATCGGGCTCCGTCTGCATGGCTGTGTCCGCCCGCCCCCCGGACTGAATGGATaGTGTCACTTTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: LHPASRIGLRLHGCVRPPPGLNG*CHFHHC
Trigger: ACAGTGATGAAAGTGACATCATCCATTCAGTCCGGG...GGGCGGGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CCCCAGCCGCTCCCTCAGCTCCCCATTATCTTCCTCTTCCGGGAAGCCGTTCACCAGGCCAGCCCGCTCTaGACCACAGGATGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PQPLPQLPIIFLFREAVHQASPL*TTGWEW
Trigger: CCACTCCCATCCTGTGGTGCAGAGCGGGCTGGCCTG...GTGAACGGCTTCCCGGAAGAGGAAGATAATGGGGAGCTGAGGGAGCGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp GTGGCAGAGGGGGTCTGGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCATGCGGGGTTCTTCATGGCTaGCTCCTTGGCCGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VAEGVWPSEACGSAHWSCGVLHG*LLGRPL
Trigger: GAGGGGACGGCCAAGGAGGCAGCCATGAAGAACCCC...GCATGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GACCACAAGCTCCATGGGCTCCCGGGCCTTGTTTCGATAAGCCCGACGGATGGTTCCAGGCCTGGTCGCTaGTGTGGCGCCGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: DHKLHGLPGLVSISPTDGSRPGR*CGAASL
Trigger: AAGGCTGGCGGCGCCACACCAGCGACCAGGCCTGGA...ACCATCCGTCGGGCTTATCGAAACAAGGCCCGGGAGCCCATGGAGCTTGTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAAGCAGGAGGCCGGATTACGGCGCTACCCATaGTGGTGCTCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GDAWVACPAGLVSKQEAGLRRYP*WCSPGS
Trigger: TGAGCCTGGAGAGCACCACCATGGGTAGCGCCGTAA...TCCGGCCTCCTGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR CCA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGACGGGCTCCGTCTGCATaGCTGTGTCCGCCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGRAPSA*LCPPAP
Trigger: GGGGGCGGGCGGACACAGCCATGCAGACGGAGCCCG...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CTTCTGAGCTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCCCGGCCTGTCGAGGATaGCCAGCAGGGGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: LLSWCRRVLNRTSPLPGAPACRG*PAGASP
Trigger: TGGTGAGGCCCCTGCTGGCCATCCTCGACAGGCCGG...GGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GTGGCAGAGGGGGTCTGGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCATGCTGGTGGGCAGGCAAGTaGTCAGCAGGAAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VAEGVWPSEACGSAHWSCWWAGK*SAGRPP
Trigger: TGGGGGCCTTCCTGCTGACCACTTGCCTGCCCACCA...GCATGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GGGCGCTGGAGGCGCACGAAGAGACGCTGGAGCTGCTCTCAGAGGCCGGGGACAGAGAGTCTGTGTCCCTaGAGGCTTGGGCGACTCATA +
Preference number: 4 (lower is better)
Translates to: GRWRRTKRRWSCSQRPGTESLCP*RLGRLI
Trigger: TATGAGTCGCCCAAGCCTCCAGGGACACAGACTCTC...TGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CAA 72 bp CCGGCCGGTCTCCTTGATGGTCAGCATGATGTGCGTTaGGCCCTTCAGCACCTCCACGGCCTGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PAGLLDGQHDVR*ALQHLHGLAVA
Trigger: AGCCACAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTGACCATCAAGGAGACCGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGAGCGTCCCATGGGCGATaGGGCTCGGATTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGASHGR*GSDSAG
Trigger: CCCCGCGGAATCCGAGCCTCATCGCCCATGGGACGC...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGCTTCCTCCACTTTGCTaGCGAAGATGCCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWLPPLC*RRCPGH
Trigger: ATGGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAAG...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAGCCCATTCACCTCCGTaGTCTTGTCCCCCACGCACA +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQAHSPP*SCPPRT
Trigger: TGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGC...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR TCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAATCTCCTTGGAGAACTTaGTGCCCGGCACACGGCCCA +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQSPWRT*CPAHGP
Trigger: TGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGA...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR TCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAACACCATGGTCCACTCTaGGGCCAGACAGGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQHHGPL*GQTGVS
Trigger: ACTGACGCCTGTCTGGCCTCAGAGTGGACCATGGTG...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGCTCTGGGCCAGGTCCTaGATGAGGGGCCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESELWARS*MRGRRL
Trigger: GAGCCGGCGGCCCCTCATTCAGGACCTGGCCCAGAG...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGAGTGTCCAGGCCTCTCTaGGCCCGTCCCGCGCTAGCC +
Preference number: 4 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGVSRPL*ARPALA
Trigger: GGCTAGCGCGGGACGGGCGCAGAGAGGCCTGGACAC...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GCAGGAACTGGAGCAGCATCAAGGGGTTGGTGGGCAGGCAAGTGGTCAGCAGGACTCTCCGAGGGCCCTTaGTTGGCCCCCACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AGTGAASRGWWAGKWSAGLSEGP*LAPTLA
Trigger: AGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAG...TCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp CCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGAGCATGATGTGCGTTTaGCCCTTCAGCACCTCCACG +
Preference number: 4 (lower is better)
Translates to: PSPQFHSPRALAWPPPWLSMMCV*PFSTST
Trigger: CGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCT...CAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGAGCCCCCGCGCACGCTaGAGCCCAGCCTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVSPRAR*SPASLL
Trigger: CAGCAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCT...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp CTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCACGGGGGTGATAAGGTaGCGCTTGGGTGGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: LVSEGVEPHFSTTRRRFTTGVIR*RLGGVS
Trigger: GGACACGCCACCCAAGCGTCACCTTATCACCCCCGT...GGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp GCAGGAACTGGAGCAGCATCAAGGGGTTGGTGGGCAGGCAAGTGGTCAGCAGGATGGGTCGAAGCCCACTaGGAAACCCTGCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: AGTGAASRGWWAGKWSAGWVEAH*ETLRHG
Trigger: GCCATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCA...TCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp TGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCGTGTCCAGGCCTCTCTaGGCCCGTCCCGCGCTAGCC +
Preference number: 4 (lower is better)
Translates to: WLWWTRAFLQGTTMCLEAVSRPL*ARPALA
Trigger: GGCTAGCGCGGGACGGGCGCAGAGAGGCCTGGACAC...GGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp GTGGCAGAGGGGGTCTGGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCATGCGGGGTTCTGCTTACCTaGACTGCTGCCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VAEGVWPSEACGSAHWSCGVLLT*TAAFLH
Trigger: GTGGAGGAAGGCAGCAGTGCAGGTAAGCAGAACCCC...GCATGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGACACTCCTGATGTCCTaGAGCAGTAGCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWTLLMS*SSSSFS
Trigger: GGAGAAGCTGCTACTGCTGCAGGACATCAGGAGTGT...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAACGCTGGTGGGTCACCTaGTCTAGATTCTCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQRWWVT*SRFSPS
Trigger: GGACGGAGAGAATCTAGAGCAGGTGACCCACCAGCG...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAGATGCGTGGGGAGGGTaGGGGCTTAGAATCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQDAWGG*GLRIRS
Trigger: ACTCCTGATTCTAAGCCCGCACCCTCCCCACGCATC...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGCTGCGCCATGGCGGCTaGGCTAGGGCGGCACCCTAC +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVLRHGG*ARAAPY
Trigger: GTAGGGTGCCGCCCTAGCCCAGCCGCCATGGCGCAG...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCACCTGCGCCATGGCGGCTaGGCTAGGGCGGCACCCTAC +
Preference number: 4 (lower is better)
Translates to: ALVDKSFPSGNHNVPGSHLRHGG*ARAAPY
Trigger: GTAGGGTGCCGCCCTAGCCCAGCCGCCATGGCGCAG...GTGGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCGGGCTCCGTCTGCATaGCTGTGTCCGCCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVRAPSA*LCPPAP
Trigger: GGGGGCGGGCGGACACAGCCATGCAGACGGAGCCCG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGGAACCACAATGTGCCTaGAAGCCACAACTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWEPQCA*KPQLPL
Trigger: TAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644782.1
3UTR CAA 72 bp CGCCGATTCACCACATCCACCCACGTGGTCTTCTCCTaGGAGAACTTGATGCCCGGCACACGGCCCATGCGC +
Preference number: 4 (lower is better)
Translates to: RRFTTSTHVVFS*ENLMPGTRPMR
Trigger: GCGCATGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGGTGAATCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GACCACAAGCTCCATGGGCTCCCGGGCCTTGTTTCGATAAGCCCGACGGATGGTTGCCTCTCAGAAGTGTaGGCTCCAGGCCTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: DHKLHGLPGLVSISPTDGCLSEV*APGLVA
Trigger: AGCGACCAGGCCTGGAGCTCACACTTCTGAGAGGCA...ACCATCCGTCGGGCTTATCGAAACAAGGCCCGGGAGCCCATGGAGCTTGTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGGCGTCCCATGGGCGATaGGGCTCGGATTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVASHGR*GSDSAG
Trigger: CCCCGCGGAATCCGAGCCTCATCGCCCATGGGACGC...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGAGCCCCCGCGCACGCTaGAGCCCAGCCTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWSPRAR*SPASLL
Trigger: CAGCAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCT...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGGCCCAGGCCATGCTCTaGGCCCCCGCGCACGCTGAA +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWAQAML*APAHAE
Trigger: TTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGC...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGGCCCAGGCCATGCTCTaGGCCCCCGCGCACGCTGAA +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVAQAML*APAHAE
Trigger: TTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGC...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp CTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCTCTCCTTGGAGAACTTaGTGCCCGGCACACGGCCCA +
Preference number: 4 (lower is better)
Translates to: LVSEGVEPHFSTTRRRFTSPWRT*CPAHGP
Trigger: TGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGA...GGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp TCTGGGGATTGGTGGGAGGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATCCGGACACCATCTTCTaGGCTGGTGTCGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SGDWWEVLGASGQELEQHPDTIF*AGVGGC
Trigger: ACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGG...ATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GCAGGAACTGGAGCAGCATCAAGGGGTTGGTGGGCAGGCAAGTGGTCAGCAGGATCTTCCGTCTGTCCCTaGCAGCAGCATCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: AGTGAASRGWWAGKWSAGSSVCP*QQHPLP
Trigger: TGGCAGGGGATGCTGCTGTCAGGGACAGACGGAAGA...TCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp CATCAATCAGGCCCTCCAGAGCTGGGGACTCTTCCGTCTGTCCCTGACAGCAGCGGACTGCCCTGCTCTTaGGGGCCTCAAAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HQSGPPELGTLPSVPDSSGLPCS*GPQKPP
Trigger: TGGAGGCTTTTGAGGCCCTCAAGAGCAGGGCAGTCC...GCTGCTGTCAGGGACAGACGGAAGAGTCCCCAGCTCTGGAGGGCCTGATTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGCCTGGAGACTTGCCTTaGCCCCGGCTGCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVPGDLP*PRLLRL
Trigger: CAGCCGCAGCAGCCGGGGTCAAGGCAAGTCTCCAGG...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp CTTCCTGCCTCAGCCCTCACTTGGACACATAGATGCCCAGGCCAAACTCCTTGCCCCACTGCGAAACCCTaGGCCATGGCGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: LPASALTWTHRCPGQTPCPTAKP*AMAAGL
Trigger: TAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGG...GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAGTGAGGGCTGAGGCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTTCAGCAGCCGTTGTTaGTTCCTTAGCAGGTATCGC +
Preference number: 4 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWFSSRC*FLSRYR
Trigger: GCGATACCTGCTAAGGAAGCAACAACGGCTGCTGAA...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGGAGGCCGGGGACAGCTaGTGCAGCACCCCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVEAGDS*CSTPLL
Trigger: GAGCAACGGGGTGCTGCAGCAGCTGTCCCCGGCCTC...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGCATCGGGCTCCGTCTaGATGGCTGTGTCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWASGSV*MAVSAR
Trigger: GCGGGCGGACACAGCCATGCAGACGGAGCCCGATGC...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGCGCGCTAGCCTCCCCTaGCGCCCTCCCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESERASLP*RPPLKK
Trigger: CTTCTTCAAGGGAGGGCGGCAGGGGAGGCTAGCGCG...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGGTGTCCAGGCCTCTCTaGGCCCGTCCCGCGCTAGCC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVVSRPL*ARPALA
Trigger: GGCTAGCGCGGGACGGGCGCAGAGAGGCCTGGACAC...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACTGCTGCGGCTGCGGCTaGGGCTACGGCTGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDCCGCG*GYGCGY
Trigger: GTAGCCGCAGCCGTAGCCGCAGCCGCAGCCGCAGCA...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAGGGTTGAGGAATGGATaGATTGACCCCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQGLRNG*IDPFRA
Trigger: GGCCCTGAAGGGGTCAATGCATCCATTCCTCAACCC...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCTGCGCCATGGCGGCTaGGCTAGGGCGGCACCCTAC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVLRHGG*ARAAPY
Trigger: GTAGGGTGCCGCCCTAGCCCAGCCGCCATGGCGCAG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCGGGCTCCGTCTGCATaGCTGTGTCCGCCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWRAPSA*LCPPAP
Trigger: GGGGGCGGGCGGACACAGCCATGCAGACGGAGCCCG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp CATCAATCAGGCCCTCCAGAGCTGGGGACTCTTCCGTCTGTCCCTGACAGCAGCTGGGGAGCGTCTACCTaGAGACTTGCCTTGACCCCG +
Preference number: 4 (lower is better)
Translates to: HQSGPPELGTLPSVPDSSWGAST*RLALTP
Trigger: CGGGGTCAAGGCAAGTCTCCAGGTAGACGCTCCCCA...GCTGCTGTCAGGGACAGACGGAAGAGTCCCCAGCTCTGGAGGGCCTGATTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp CCCCAGCCGCTCCCTCAGCTCCCCATTATCTTCCTCTTCCGGGAAGCCGTTCACCCAGTGGGCAGGAACTaGAGCAGCATCAAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PQPLPQLPIIFLFREAVHPVGRN*SSIKGL
Trigger: CAACCCCTTGATGCTGCTCCAGTTCCTGCCCACTGG...GTGAACGGCTTCCCGGAAGAGGAAGATAATGGGGAGCTGAGGGAGCGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp CGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCACATCCATTAGGGGGAGGGTCATaGGATGCGTGGGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RRVLNRTSPLPGADSPHPLGGGS*DAWGGC
Trigger: GCACCCTCCCCACGCATCCCATGACCCTCCCCCTAA...TGGATGTGGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CAA 72 bp ACCACATCCACCCACGTGGTCTTCTCCTTGGAGAACTaGATGCCCGGCACACGGCCCATGCGCCGAACCATC +
Preference number: 4 (lower is better)
Translates to: TTSTHVVFSLEN*MPGTRPMRRTI
Trigger: GATGGTTCGGCGCATGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGCGTCCCATGGGCGATaGGGCTCGGATTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWASHGR*GSDSAG
Trigger: CCCCGCGGAATCCGAGCCTCATCGCCCATGGGACGC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp GGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAAGCAGGAGGCCGGACCCGGACTGAATGGATaGTGTCACTTTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: GDAWVACPAGLVSKQEAGPGLNG*CHFHHC
Trigger: ACAGTGATGAAAGTGACATCATCCATTCAGTCCGGG...TCCGGCCTCCTGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR TCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGAGCCCCCGCGCACGCTaGAGCCCAGCCTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGSPRAR*SPASLL
Trigger: CAGCAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCT...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGCCCAGGCCATGCTCTaGGCCCCCGCGCACGCTGAA +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWAQAML*APAHAE
Trigger: TTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp CTTCTGAGCTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGGTGTCGGAGGGTGTTaGACCGCACTTCTCCACTAC +
Preference number: 4 (lower is better)
Translates to: LLSWCRRVLNRTSPLPGAGVGGC*TALLHY
Trigger: GTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACC...GGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp CTTCCTGCCTCAGCCCTCACTTGGACACATAGATGCCCAGGCCAAACTCCTTGCCCAGGCCTCACTTGCTaGCCATCCCCACATCCCAGC +
Preference number: 4 (lower is better)
Translates to: LPASALTWTHRCPGQTPCPGLTC*PSPHPS
Trigger: GCTGGGATGTGGGGATGGTCAGCAAGTGAGGCCTGG...GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAGTGAGGGCTGAGGCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGACGGGGGTGATAAGGTaGCGCTTGGGTGGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESETGVIR*RLGGVS
Trigger: GGACACGCCACCCAAGCGTCACCTTATCACCCCCGT...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGTGGGCCCGGGGACCCTaGCCACAAGCTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWWARGP*PQAPWA
Trigger: AGCCCATGGAGCTTGTGGTCAGGGTCCCCGGGCCCA...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGGGAGCAGTGGCGGGTaGCAGCCAGCACCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWGSSGG*QPAPRH
Trigger: ATGACGAGGTGCTGGCTGTCACCCGCCACTGCTCCC...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp GCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCACCCTGACACCGTTGGCTaGCAGGACCTGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ALVDKSFPSGNHNVPGSHPDTVG*QDLVPH
Trigger: GTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGG...GTGGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGGAGGCCGGGGACAGCTaGTGCAGCACCCCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVEAGDS*CSTPLL
Trigger: GAGCAACGGGGTGCTGCAGCAGCTGTCCCCGGCCTC...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACGCATCGGGCTCCGTCTaGATGGCTGTGTCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDASGSV*MAVSAR
Trigger: GCGGGCGGACACAGCCATGCAGACGGAGCCCGATGC...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCTGTGGGCCGCACGCTaGACCAGGTCTCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWLWAAR*TRSPPG
Trigger: GCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACCTGTGGGCCGCACGCTaGACCAGGTCTCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHLWAAR*TRSPPG
Trigger: GCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAG...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGAGCGTCTTGGAGCGCTaGAGGGCACCCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESESVLER*RAPFSP
Trigger: TGGGGAGAAGGGTGCCCTGCAGCGCTCCAAGACGCT...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAGTGTCCAGGCCTCTCTaGGCCCGTCCCGCGCTAGCC +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVVSRPL*ARPALA
Trigger: GGCTAGCGCGGGACGGGCGCAGAGAGGCCTGGACAC...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GCGACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCCCGGATCTGGCTCTaGGGAGGGTGCTCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: ATHKGQHVRKCPPIPSSRPRIWL*GGCSRL
Trigger: GAGCCGAGAGCACCCTCCGCAGAGCCAGATCCGGGG...TCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGGGCCCCCACCTTGGCTaGCTCCCCATCCAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWGPHLG*LPIQRS
Trigger: CGACCTCTGGATGGGGAGGCAGCCAAGGTGGGGGCC...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGGGGGTTCTTCATGGCTaGCTCCTTGGCCGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESEGVLHG*LLGRPL
Trigger: GAGGGGACGGCCAAGGAGGCAGCCATGAAGAACCCC...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACCATGGGCTGCACCTTGGACTCAATGCCCCCAGAAATGCTGATACCTAAGGACTGTGAGCTCCAGGCCTaGTCGCTGGTGTGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TMGCTLDSMPPEMLIPKDCELQA*SLVWRR
Trigger: GCGGCGCCACACCAGCGACCAGGCCTGGAGCTCACA...GTCCTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp CGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCACATCCAGCCTCTGTGCGGGGCTaGGGTCTCAGTAACGTGAAG +
Preference number: 4 (lower is better)
Translates to: RRVLNRTSPLPGADSPHPASVRG*GLSNVK
Trigger: CTTCACGTTACTGAGACCCCAGCCCCGCACAGAGGC...TGGATGTGGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCTGCGCCATGGCGGCTaGGCTAGGGCGGCACCCTAC +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWLRHGG*ARAAPY
Trigger: GTAGGGTGCCGCCCTAGCCCAGCCGCCATGGCGCAG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGGAGTCGCTGCCTAGGTaGCCTCGGGAGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVESLPR*PREERE
Trigger: CTCCCTCTCCTCCCGAGGCCACCTAGGCAGCGACTC...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGCAGGCGGCTGCTGCTaGTCAGCACCTTTACGGCGC +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWAGGCC*SAPLRR
Trigger: GCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGC...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGAAGTCTGATAGGCCCCTaGCCTGCCCTCCGTTACCCC +
Preference number: 4 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGSLIGP*PALRYP
Trigger: GGGGTAACGGAGGGCAGGCCAGGGGCCTATCAGACT...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GCGACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCGGCCTGTCGAGGATaGCCAGCAGGGGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: ATHKGQHVRKCPPIPSSRPACRG*PAGASP
Trigger: TGGTGAGGCCCCTGCTGGCCATCCTCGACAGGCCGG...TCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGACCGGCCTGTCGAGGATaGCCAGCAGGGGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: GTTMCLEATTAPSGERSRPACRG*PAGASP
Trigger: TGGTGAGGCCCCTGCTGGCCATCCTCGACAGGCCGG...TCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp CTCCAGAGCTGGGGACTCTTCCGTCTGTCCCTGACAGCAGCATCCCCTGCCATTATCCCTTTATGGGGGTaGCGAGGGGCAGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: LQSWGLFRLSLTAASPAIIPLWG*RGAEAL
Trigger: AAGTGCCTCTGCCCCTCGCCACCCCCATAAAGGGAT...AATGGCAGGGGATGCTGCTGTCAGGGACAGACGGAAGAGTCCCCAGCTCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GGCTGCCTCCTTGGCCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCTCTCTATCTTCACCATaGGCTGCACCTTGGACTCAA +
Preference number: 4 (lower is better)
Translates to: GCLLGRPLSSTLRGPLLGSLSSP*AAPWTQ
Trigger: TTGAGTCCAAGGTGCAGCCCATGGTGAAGATAGAGA...GCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGGCCAAGGAGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGTGGTGGGCAGGCAAGTaGTCAGCAGGAAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESEWWAGK*SAGRPP
Trigger: TGGGGGCCTTCCTGCTGACCACTTGCCTGCCCACCA...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp TGCTGCTGGTCAGCACCTTTACGGCGCTACCCATGGTGGTGCTCTCCAGGCTCAGCATCAAGGGGTTGGTaGGCAGGCAAGTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: CCWSAPLRRYPWWCSPGSASRGW*AGKWSA
Trigger: TGCTGACCACTTGCCTGCCCACCAACCCCTTGATGC...TGAGCCTGGAGAGCACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp CTTCTGAGCTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGCAGCATCAAGGGGTTaGTGGGCAGGCAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LLSWCRRVLNRTSPLPGAAASRG*WAGKWS
Trigger: TGACCACTTGCCTGCCCACCAACCCCTTGATGCTGC...GGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGGCCCGGCCCCTCTCCTaGTCACGTCTCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVARPLS*SRLSLQ
Trigger: CTGGAGACTGAGACGTGACCAGGAGAGGGGCCGGGC...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAACCATGTTGGCCAGGTTaGTCTCTACTCCTCACCTCA +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQPCWPG*SLLLTS
Trigger: TGAGGTGAGGAGTAGAGACCAACCTGGCCAACATGG...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
3UTR CAA 72 bp GCCGGACACCATCTTCTGAGCTGGTGTCGGAGGGTGTaGAACCGCACTTCTCCACTACCAGGCGCCGATTCA +
Preference number: 4 (lower is better)
Translates to: AGHHLLSWCRRV*NRTSPLPGADS
Trigger: TGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
3UTR CAA 72 bp CCTGCCCTCCGTTACCCCACTCCAGACCCCCTTCTCTaGGACACAAGACTGCACCAGTCAAGGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: PALRYPTPDPLL*DTRLHQSRSLT
Trigger: GGTCAAGGACCTTGACTGGTGCAGTCTTGTGTCCAAGAGAAGGGGGTCTGGAGTGGGGTAACGGAGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGGTGCTTCGAGCTCCATaGGCCTCTGTGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVVLRAP*ASVRGW
Trigger: CCAGCCCCGCACAGAGGCTCATGGAGCTCGAAGCAC...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGAGCCCCCGCGCACGCTaGAGCCCAGCCTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRSPRAR*SPASLL
Trigger: CAGCAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCT...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp GTGGTGACCAGCAGATGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCAAGCCCCCGCGCACGCTaGAGCCCAGCCTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VVTSRCDKMALVDKSFPSSPRAR*SPASLL
Trigger: CAGCAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCT...TGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACATCTGCTGGTCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp TGCTGCTGGTCAGCACCTTTACGGCGCTACCCATGGTGGTGCTCTCCAGGCTCACTTCCTCCACTTTGCTaGCGAAGATGCCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: CCWSAPLRRYPWWCSPGSLPPLC*RRCPGH
Trigger: ATGGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAAG...TGAGCCTGGAGAGCACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGTGCCCCCACGGATGTTaGAGCCCAGGCAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESECPHGC*SPGRSR
Trigger: ACGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCA...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACCCCACTGCGAAACCCTaGGCCATGGCGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDPTAKP*AMAAGL
Trigger: TAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGG...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGATGGAGCCTGAGTCGCTaGCTAGGTGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTTMCLEATTAPSGERSRWSLSR*LGGLGR
Trigger: CCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCA...TCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGGAAGCCCAGCCTCCCTaGTGGACTCTTCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVEAQPP*WTLLHP
Trigger: CGGGTGGAGAAGAGTCCAGCAGGGAGGCTGGGCTTC...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACAAGATGCCCAGGCCATaGTCTGAGCCCCCGCGCACG +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDKMPRP*SEPPRT
Trigger: CGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTT...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGACAGCCCGCTCTGCACTaGTGCCTTCCTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGQPALH*CLPPLC
Trigger: GCAAAGTGGAGGAAGGCAGCAGTGCAGAGCGGGCTG...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCAGGCCAGCCCGCTCTaGACTGCTGCCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVQASPL*TAAFLH
Trigger: GTGGAGGAAGGCAGCAGTGCAGAGCGGGCTGGCCTG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp CTTCTGAGCTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCTCATGTGCAGGCGGCTaGTGCTGGTCAGCACCTTTA +
Preference number: 4 (lower is better)
Translates to: LLSWCRRVLNRTSPLPGASCAGG*CWSAPL
Trigger: TAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGA...GGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGCGCCGAACCATCATGTaGAGGCGGCTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWRRTIM*RRLLLV
Trigger: GACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCG...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAGAGGCCGGGGACAGCTaGTGCAGCACCCCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVEAGDS*CSTPLL
Trigger: GAGCAACGGGGTGCTGCAGCAGCTGTCCCCGGCCTC...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGAAGAGACGCTGGAGCTaGTCTCAGAGGCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESEKRRWS*SQRPGT
Trigger: TGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTT...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCGAGGCAGATGTCCATaGGGTCCGACGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVRGRCP*GPTAGS
Trigger: GCTCCCTGCCGTCGGACCGCATGGACATCTGCCTCG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCTGCCGGGCTCCTCCTaGCCGAGGCAGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVLPGSS*PRQMSM
Trigger: CATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAGCATCGGGCTCCGTCTaGATGGCTGTGTCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVASGSV*MAVSAR
Trigger: GCGGGCGGACACAGCCATGCAGACGGAGCCCGATGC...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGCATCGGGCTCCGTCTaGATGGCTGTGTCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWASGSV*MAVSAR
Trigger: GCGGGCGGACACAGCCATGCAGACGGAGCCCGATGC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGACGCGCTAGCCTCCCCTaGCGCCCTCCCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GTTMCLEATTAPSGERSRRASLP*RPPLKK
Trigger: CTTCTTCAAGGGAGGGCGGCAGGGGAGGCTAGCGCG...TCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp CGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCACATCCATCAGCCTGGGGGTTCTaGTTACCTGCACTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RRVLNRTSPLPGADSPHPSAWGF*LPALLP
Trigger: AGGCAGCAGTGCAGGTAAGCAGAACCCCCAGGCTGA...TGGATGTGGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGTGGCTCTGCGGAGGGTaGTCTCGGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWWLCGG*SRLRGS
Trigger: AGAACCCCTGAGCCGAGAGCACCCTCCGCAGAGCCA...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAACCTTGCACAGAATGCTaGTTGGGGTTGAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQPCTEC*LGLRNG
Trigger: TCCATTCCTCAACCCCAAGCAGCATTCTGTGCAAGG...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGGCCTGGTCGCTGGTGTaGCGCCGCCAGCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVAWSLV*RRQPCQ
Trigger: TTGACAAGGCTGGCGGCGCCACACCAGCGACCAGGC...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR CCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGGCCTGGTCGCTGGTGTaGCGCCGCCAGCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWAWSLV*RRQPCQ
Trigger: TTGACAAGGCTGGCGGCGCCACACCAGCGACCAGGC...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACTCCAGGCCTGGTCGCTaGTGTGGCGCCGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHSRPGR*CGAASL
Trigger: AAGGCTGGCGGCGCCACACCAGCGACCAGGCCTGGA...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTATGTGAGCTCCAGGCCTaGTCGCTGGTGTGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVCELQA*SLVWRR
Trigger: GCGGCGCCACACCAGCGACCAGGCCTGGAGCTCACA...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGCTGCGCCATGGCGGCTaGGCTAGGGCGGCACCCTAC +
Preference number: 4 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGLRHGG*ARAAPY
Trigger: GTAGGGTGCCGCCCTAGCCCAGCCGCCATGGCGCAG...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACGAGTCGCTGCCTAGGTaGCCTCGGGAGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDESLPR*PREERE
Trigger: CTCCCTCTCCTCCCGAGGCCACCTAGGCAGCGACTC...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGGCAGGCGGCTGCTGCTaGTCAGCACCTTTACGGCGC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVAGGCC*SAPLRR
Trigger: GCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGC...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp ACCATGGGCTGCACCTTGGACTCAATGCCCCCAGAAATGCTGATACCTAAGGACAGCTGTAGGGGGCGCTaGAGGCGCACGAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: TMGCTLDSMPPEMLIPKDSCRGR*RRTKRR
Trigger: GCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCT...GTCCTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACAGCTGTAGGGGGCGCTaGAGGCGCACGAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDSCRGR*RRTKRR
Trigger: GCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCT...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGAGCTGTAGGGGGCGCTaGAGGCGCACGAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVSCRGR*RRTKRR
Trigger: GCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCT...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp CCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTCGGGCTCCGTCTGCATaGCTGTGTCCGCCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: PSSLSLHPGLWPRFHLYIRAPSA*LCPPAP
Trigger: GGGGGCGGGCGGACACAGCCATGCAGACGGAGCCCG...AATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp GTGGTGACCAGCAGATGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCACGGGCTCCGTCTGCATaGCTGTGTCCGCCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: VVTSRCDKMALVDKSFPSRAPSA*LCPPAP
Trigger: GGGGGCGGGCGGACACAGCCATGCAGACGGAGCCCG...TGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACATCTGCTGGTCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGACCACAGGATGGGAGTaGCTGGCATGGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWTTGWE*LAWVPR
Trigger: CCTGGGGACCCATGCCAGCCACTCCCATCCTGTGGT...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACAGGGGCAGAGGCACTTaGGGAGACCTTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDRGRGT*GDLEGP
Trigger: GGGGCCCTCAAGGTCTCCCCAAGTGCCTCTGCCCCT...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGGCCCGGCCCCGGATCTaGCTCTGCGGAGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGARPRI*LCGGCS
Trigger: AGAGCACCCTCCGCAGAGCCAGATCCGGGGCCGGGC...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGGGTAGGCACCGGGGATaGGGAGCGTCTACCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVGRHRG*GASTWR
Trigger: TCTCCAGGTAGACGCTCCCCATCCCCGGTGCCTACC...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGGCAGAGGGGGTCTaGCCTTCCGAGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWVAEGV*PSEACG
Trigger: ACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CATCAATCAGGCCCTCCAGAGCTGGGGACTCTTCCGTCTGTCCCTGACAGCAGCTCAGTGGGAGGAGTCTaGGGATTGGTGGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: HQSGPPELGTLPSVPDSSSVGGV*GLVGGS
Trigger: AGAACCTCCCACCAATCCCCAGACTCCTCCCACTGA...GCTGCTGTCAGGGACAGACGGAAGAGTCCCCAGCTCTGGAGGGCCTGATTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGTTAGGGGGAGGGTCATaGGATGCGTGGGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVLGGGS*DAWGGC
Trigger: GCACCCTCCCCACGCATCCCATGACCCTCCCCCTAA...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp GGGCCTCACCAGGTCCTCTATGCCTCCCTCGTGCACATACTTTCTCTATGTCCAGGGGTCTCAGTAACGTaGAGGCCCTCGCTTGCGATG +
Preference number: 4 (lower is better)
Translates to: GPHQVLYASLVHILSLCPGVSVT*RPSLAM
Trigger: CATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCC...TGGACATAGAGAAAGTATGTGCACGAGGGAGGCATAGAGGACCTGGTGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp TGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCGGGGTCTCAGTAACGTaGAGGCCCTCGCTTGCGATG +
Preference number: 4 (lower is better)
Translates to: WLWWTRAFLQGTTMCLEAGVSVT*RPSLAM
Trigger: CATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCC...GGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGTGCTTCGAGCTCCATaGGCCTCTGTGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHVLRAP*ASVRGW
Trigger: CCAGCCCCGCACAGAGGCTCATGGAGCTCGAAGCAC...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp GAGCTCCCTGGGGTCAAACTGAGCTTCTCAATCAGAGTGAGGATTGTCAGAGCAGTGCTTCGAGCTCCATaGGCCTCTGTGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELPGVKLSFSIRVRIVRAVLRAP*ASVRGW
Trigger: CCAGCCCCGCACAGAGGCTCATGGAGCTCGAAGCAC...TGCTCTGACAATCCTCACTCTGATTGAGAAGCTCAGTTTGACCCCAGGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAAGTGCTTCGAGCTCCATaGGCCTCTGTGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EPQCAWKPQLPLVGKEVEVLRAP*ASVRGW
Trigger: CCAGCCCCGCACAGAGGCTCATGGAGCTCGAAGCAC...TTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGTCTCCTTGGAGAACTTaGTGCCCGGCACACGGCCCA +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWSPWRT*CPAHGP
Trigger: TGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGA...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGTGCCCCCACGGATGTTaGAGCCCAGGCAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWCPHGC*SPGRSR
Trigger: ACGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCA...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp GGGCCTCACCAGGTCCTCTATGCCTCCCTCGTGCACATACTTTCTCTATGTCCATGTCAGAGCAGGGGCTaGGTGTTCCCAGTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: GPHQVLYASLVHILSLCPCQSRG*VFPVPR
Trigger: CCTAGGCACTGGGAACACTCAGCCCCTGCTCTGACA...TGGACATAGAGAAAGTATGTGCACGAGGGAGGCATAGAGGACCTGGTGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp CTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCGCTTCTCAATCAGAGTaGGGATTGTCAGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LVSEGVEPHFSTTRRRFTASQSE*GLSEQG
Trigger: CCCCTGCTCTGACAATCCTCACTCTGATTGAGAAGC...GGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAACGGGGGTGATAAGGTaGCGCTTGGGTGGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: GTTMCLEATTAPSGERSRTGVIR*RLGGVS
Trigger: GGACACGCCACCCAAGCGTCACCTTATCACCCCCGT...TCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp CTTCCTGCCTCAGCCCTCACTTGGACACATAGATGCCCAGGCCAAACTCCTTGCGAGGAATGGATGCATTaGCCCCTTCAGGGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LPASALTWTHRCPGQTPCEEWMH*PLQGPV
Trigger: GACAGGGCCCTGAAGGGGTCAATGCATCCATTCCTC...GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAGTGAGGGCTGAGGCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp TGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCCTCTGGGACTCTGACTaGCCAGGCACGGGGGTGATA +
Preference number: 4 (lower is better)
Translates to: WLWWTRAFLQGTTMCLEALWDSD*PGTGVI
Trigger: TATCACCCCCGTGCCTGGTCAGTCAGAGTCCCAGAG...GGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTACCCACTGCGAAACCCTaGGCCATGGCGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVPTAKP*AMAAGL
Trigger: TAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGG...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGTCGAAGCCCACTaGGAAACCCTGCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVWVEAH*ETLRHG
Trigger: GCCATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCA...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTGGAGCCTGAGTCGCTaGCTAGGTGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWWSLSR*LGGLGR
Trigger: CCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCA...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGGAAGCCCAGCCTCCCTaGTGGACTCTTCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVEAQPP*WTLLHP
Trigger: CGGGTGGAGAAGAGTCCAGCAGGGAGGCTGGGCTTC...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAAAGATGCCCAGGCCATaGTCTGAGCCCCCGCGCACG +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVKMPRP*SEPPRT
Trigger: CGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTT...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACCAGGCCAGCCCGCTCTaGACTGCTGCCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHQASPL*TAAFLH
Trigger: GTGGAGGAAGGCAGCAGTGCAGAGCGGGCTGGCCTG...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAACAGGCCAGCCCGCTCTaGACTGCTGCCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: EPQCAWKPQLPLVGKEVEQASPL*TAAFLH
Trigger: GTGGAGGAAGGCAGCAGTGCAGAGCGGGCTGGCCTG...TTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCGCCGAACCATCATGTaGAGGCGGCTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVRRTIM*RRLLLV
Trigger: GACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGACCGGCACACGGCCCATaGGCCGAACCATCATGTGCA +
Preference number: 4 (lower is better)
Translates to: GTTMCLEATTAPSGERSRPAHGP*AEPSCA
Trigger: TGCACATGATGGTTCGGCGCATGGGCCGTGTGCCGG...TCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp CATCAATCAGGCCCTCCAGAGCTGGGGACTCTTCCGTCTGTCCCTGACAGCAGCTGTATAGGTGGACGATaGGCCGGACACCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: HQSGPPELGTLPSVPDSSCIGGR*AGHHLL
Trigger: CAGAAGATGGTGTCCGGCGCATCGTCCACCTATACA...GCTGCTGTCAGGGACAGACGGAAGAGTCCCCAGCTCTGGAGGGCCTGATTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTACCTGACACCGTTGGCTaGCAGGACCTGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVPDTVG*QDLVPH
Trigger: GTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGG...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACCGAGGCAGATGTCCATaGGGTCCGACGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHRGRCP*GPTAGS
Trigger: GCTCCCTGCCGTCGGACCGCATGGACATCTGCCTCG...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTCTGCCGGGCTCCTCCTaGCCGAGGCAGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPLPGSS*PRQMSM
Trigger: CATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAG...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTACTGCCGGGCTCCTCCTaGCCGAGGCAGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVLPGSS*PRQMSM
Trigger: CATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAG...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATCTGTGGGCCGCACGCTaGACCAGGTCTCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: TKQPLPSPRFMASFSLVYLWAAR*TRSPPG
Trigger: GCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAG...ATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTACGCGCTAGCCTCCCCTaGCGCCCTCCCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVRASLP*RPPLKK
Trigger: CTTCTTCAAGGGAGGGCGGCAGGGGAGGCTAGCGCG...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCTGGGGATTGGTGGGAGGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATACACTCCTGATGTCCTaGAGCAGTAGCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SGDWWEVLGASGQELEQHTLLMS*SSSSFS
Trigger: GGAGAAGCTGCTACTGCTGCAGGACATCAGGAGTGT...ATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGGTCTACCTGGAGACTTaGCTTGACCCCGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVVYLET*LDPGCC
Trigger: GCAGCAGCCGGGGTCAAGGCAAGTCTCCAGGTAGAC...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAGCTCGAAGCCAGCCTaGAGGGCCCCACTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVSSKPA*RAPLRK
Trigger: TTTCCTCAGTGGGGCCCTGCAGGCTGGCTTCGAGCT...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp CTTCCTGCCTCAGCCCTCACTTGGACACATAGATGCCCAGGCCAAACTCCTTGCACGGATGGTGTCTACTaGACGCTGGTGGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: LPASALTWTHRCPGQTPCTDGVY*TLVGHL
Trigger: CAGGTGACCCACCAGCGTGCAGTAGACACCATCCGT...GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAGTGAGGGCTGAGGCAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAGAGTCGCTGCCTAGGTaGCCTCGGGAGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVESLPR*PREERE
Trigger: CTCCCTCTCCTCCCGAGGCCACCTAGGCAGCGACTC...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp GAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAAGAGTCGCTGCCTAGGTaGCCTCGGGAGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: EPQCAWKPQLPLVGKEVEESLPR*PREERE
Trigger: CTCCCTCTCCTCCCGAGGCCACCTAGGCAGCGACTC...TTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACCGGCGCTACCCATGGTaGTGCTCTCCAGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHRRYPW*CSPGSA
Trigger: GGCTGAGCCTGGAGAGCACCACCATGGGTAGCGCCG...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCGGCGCTACCCATGGTaGTGCTCTCCAGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWRRYPW*CSPGSA
Trigger: GGCTGAGCCTGGAGAGCACCACCATGGGTAGCGCCG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGTTACGGCGCTACCCATaGTGGTGCTCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESELRRYP*WCSPGS
Trigger: TGAGCCTGGAGAGCACCACCATGGGTAGCGCCGTAA...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTGCAGGCGGCTGCTGCTaGTCAGCACCTTTACGGCGC +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPAGGCC*SAPLRR
Trigger: GCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGC...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAAGCTGTAGGGGGCGCTaGAGGCGCACGAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVSCRGR*RRTKRR
Trigger: GCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCT...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp GAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAAAGCTGTAGGGGGCGCTaGAGGCGCACGAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: EPQCAWKPQLPLVGKEVESCRGR*RRTKRR
Trigger: GCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCT...TTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp GGGCCTCACCAGGTCCTCTATGCCTCCCTCGTGCACATACTTTCTCTATGTCCAGGTTCATCAGCGTCTTaGAGCGCTGCAGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: GPHQVLYASLVHILSLCPGSSAS*SAAGHP
Trigger: AGGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACC...TGGACATAGAGAAAGTATGTGCACGAGGGAGGCATAGAGGACCTGGTGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp CTTCTGAGCTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCCAGACCCCCTTCTCTTaGACACAAGACTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: LLSWCRRVLNRTSPLPGAQTPFS*TQDCTS
Trigger: ACTGGTGCAGTCTTGTGTCCAAGAGAAGGGGGTCTG...GGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GAGCTCCCTGGGGTCAAACTGAGCTTCTCAATCAGAGTGAGGATTGTCAGAGCAAAGGTGACGCTTGGGTaGCGTGTCCTGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELPGVKLSFSIRVRIVRAKVTLG*RVLPGW
Trigger: CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTT...TGCTCTGACAATCCTCACTCTGATTGAGAAGCTCAGTTTGACCCCAGGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTAGGGGCAGAGGCACTTaGGGAGACCTTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPRGRGT*GDLEGP
Trigger: GGGGCCCTCAAGGTCTCCCCAAGTGCCTCTGCCCCT...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACCATGGGCTGCACCTTGGACTCAATGCCCCCAGAAATGCTGATACCTAAGGACGTGGCAGAGGGGGTCTaGCCTTCCGAGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TMGCTLDSMPPEMLIPKDVAEGV*PSEACG
Trigger: ACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC...GTCCTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACCCCATCCAGAGGTCGTaGCAGAGGGGGTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDPIQRS*QRGSGL
Trigger: AAGGCCAGACCCCCTCTGCCACGACCTCTGGATGGG...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGCACTGGGGTTCTTCATaGCTGCCTCCTTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVHWGSS*LPPWPS
Trigger: GGACGGCCAAGGAGGCAGCCATGAAGAACCCCAGTG...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp TGCTGCTGGTCAGCACCTTTACGGCGCTACCCATGGTGGTGCTCTCCAGGCTCATCTACTGCACGCTGGTaGGTCACCTGCTCTAGATTC +
Preference number: 4 (lower is better)
Translates to: CCWSAPLRRYPWWCSPGSSTARW*VTCSRF
Trigger: GAATCTAGAGCAGGTGACCCACCAGCGTGCAGTAGA...TGAGCCTGGAGAGCACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp CGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCACATCCAGTGTCTACTGCACGCTaGTGGGTCACCTGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: RRVLNRTSPLPGADSPHPVSTAR*WVTCSR
Trigger: TCTAGAGCAGGTGACCCACCAGCGTGCAGTAGACAC...TGGATGTGGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp CGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCACATCCAGATAAGCCCGACGGATaGTGTCTACTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: RRVLNRTSPLPGADSPHPDKPDG*CLLHAG
Trigger: ACCAGCGTGCAGTAGACACCATCCGTCGGGCTTATC...TGGATGTGGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACGGGCTGGGAGTTGGCTaGAGGAGCCTGGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDGLGVG*RSLASV
Trigger: CACTGATGCCAGGCTCCTCCAGCCAACTCCCAGCCC...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACGGGTCATGGGATGCGTaGGGAGGGTGCGGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDGSWDA*GGCGLR
Trigger: TCTAAGCCCGCACCCTCCCCACGCATCCCATGACCC...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp TGGTGGGAGGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATCAAGGGGTTGGGATAACGGGATGCTaGAGTCAGTGGGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: WWEVLGASGQELEQHQGVGITGC*SQWVNL
Trigger: CAGATTCACCCACTGACTCCAGCATCCCGTTATCCC...AACCCCTTGATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGAGTGTCCCTGGAGGCTTaGGCGACTCATAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGVSLEA*ATHKGQ
Trigger: CTGTCCCTTATGAGTCGCCCAAGCCTCCAGGGACAC...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGCCTCTCAGAAGTGTaGGCTCCAGGCCTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVCLSEV*APGLVA
Trigger: AGCGACCAGGCCTGGAGCTCACACTTCTGAGAGGCA...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp TGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGGCGTCCCATGGGCGATaGGGCTCGGATTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: CDKMALVDKSFPSGNHNVASHGR*GSDSAG
Trigger: CCCCGCGGAATCCGAGCCTCATCGCCCATGGGACGC...CACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTCTCCTTGGAGAACTTaGTGCCCGGCACACGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVSPWRT*CPAHGP
Trigger: TGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGA...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp GGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGACCGGACACCATCTTCTaGGCTGGTGTCGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GTTMCLEATTAPSGERSRPDTIF*AGVGGC
Trigger: ACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGG...TCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp TCTGGGGATTGGTGGGAGGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATTCCCTTAAACCATTCTaGCTTGAGGGTTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SGDWWEVLGASGQELEQHSLKPF*LEGWPC
Trigger: ACAGGGCCAACCCTCAAGTCAGAATGGTTTAAGGGA...ATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGTGGGCCCGGGGACCCTaGCCACAAGCTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRWARGP*PQAPWA
Trigger: AGCCCATGGAGCTTGTGGTCAGGGTCCCCGGGCCCA...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGAGCAGTGAGTGCAGGTaGCACAGGCTGCCCACTAGC +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWSSECR*HRLPTS
Trigger: GCTAGTGGGCAGCCTGTGTCACCTGCACTCACTGCT...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAGAGGCCAGCCCTGCGTaGTTCGAGCTCCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVEASPA*FELHEP
Trigger: AGGCTCATGGAGCTCGAAGCACGCAGGGCTGGCCTC...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACTGGGTCGAAGCCCACTaGGAAACCCTGCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHWVEAH*ETLRHG
Trigger: GCCATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCA...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATGGAGCCTGAGTCGCTaGCTAGGTGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: DQAASPFTQVYGLVFTCIWSLSR*LGGLGR
Trigger: CCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCA...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGAAGCCCAGCCTCCCTaGTGGACTCTTCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWEAQPP*WTLLHP
Trigger: CGGGTGGAGAAGAGTCCAGCAGGGAGGCTGGGCTTC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTGAAGCCCAGCCTCCCTaGTGGACTCTTCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPEAQPP*WTLLHP
Trigger: CGGGTGGAGAAGAGTCCAGCAGGGAGGCTGGGCTTC...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGCAGGCCAGCCCGCTCTaGACTGCTGCCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGQASPL*TAAFLH
Trigger: GTGGAGGAAGGCAGCAGTGCAGAGCGGGCTGGCCTG...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp GAGCTCCCTGGGGTCAAACTGAGCTTCTCAATCAGAGTGAGGATTGTCAGAGCACGCCGAACCATCATGTaGAGGCGGCTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: ELPGVKLSFSIRVRIVRARRTIM*RRLLLV
Trigger: GACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCG...TGCTCTGACAATCCTCACTCTGATTGAGAAGCTCAGTTTGACCCCAGGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTACGCCGAACCATCATGTaGAGGCGGCTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVRRTIM*RRLLLV
Trigger: GACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCG...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCCGGCACACGGCCCATaGGCCGAACCATCATGTGCA +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWPAHGP*AEPSCA
Trigger: TGCACATGATGGTTCGGCGCATGGGCCGTGTGCCGG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTCCGGCACACGGCCCATaGGCCGAACCATCATGTGCA +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPPAHGP*AEPSCA
Trigger: TGCACATGATGGTTCGGCGCATGGGCCGTGTGCCGG...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGCCTGACACCGTTGGCTaGCAGGACCTGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGPDTVG*QDLVPH
Trigger: GTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGG...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATACGAGGCAGATGTCCATaGGGTCCGACGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: DQAASPFTQVYGLVFTCIRGRCP*GPTAGS
Trigger: GCTCCCTGCCGTCGGACCGCATGGACATCTGCCTCG...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp CTTCCTGCCTCAGCCCTCACTTGGACACATAGATGCCCAGGCCAAACTCCTTGCTCCTTCTTCCGCTGCTaGTTCTCCTCCCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: LPASALTWTHRCPGQTPCSFFRC*FSSHKV
Trigger: GACCTTGTGGGAGGAGAAGCAGCAGCGGAAGAAGGA...GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAGTGAGGGCTGAGGCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAAGCGTCTTGGAGCGCTaGAGGGCACCCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVSVLER*RAPFSP
Trigger: TGGGGAGAAGGGTGCCCTGCAGCGCTCCAAGACGCT...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACAGCGTCTTGGAGCGCTaGAGGGCACCCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHSVLER*RAPFSP
Trigger: TGGGGAGAAGGGTGCCCTGCAGCGCTCCAAGACGCT...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp ACCATGGGCTGCACCTTGGACTCAATGCCCCCAGAAATGCTGATACCTAAGGACTTGGGTGGCGTGTCCTaGCGGGCTGGTCTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: TMGCTLDSMPPEMLIPKDLGGVS*RAGLKA
Trigger: TGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAA...GTCCTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp TTCAGGGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAATTGGGTGGCGTGTCCTaGCGGGCTGGTCTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: FREPQCAWKPQLPLVGKELGGVS*RAGLKA
Trigger: TGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAA...TTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGGGCCCCCACCTTGGCTaGCTCCCCATCCAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRGPHLG*LPIQRS
Trigger: CGACCTCTGGATGGGGAGGCAGCCAAGGTGGGGGCC...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATACTCTCCGAGGGCCCTTaGTTGGCCCCCACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DQAASPFTQVYGLVFTCILSEGP*LAPTLA
Trigger: AGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAG...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTGTGAGCTCCAGGCCTaGTCGCTGGTGTGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TKQPLPSPRFMASFSLVYCELQA*SLVWRR
Trigger: GCGGCGCCACACCAGCGACCAGGCCTGGAGCTCACA...ATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp GTGGCAGAGGGGGTCTGGCCTTCCGAGGCTTGTGGTAGCGCCCATTGGTCATGCTCCACCCGGACTGAATaGATGATGTCACTTTCATCA +
Preference number: 4 (lower is better)
Translates to: VAEGVWPSEACGSAHWSCSTRTE*MMSLSS
Trigger: TGATGAAAGTGACATCATCCATTCAGTCCGGGTGGA...GCATGACCAATGGGCGCTACCACAAGCCTCGGAAGGCCAGACCCCCTCTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGTCCACGGCCTGGCTGTaGCTGATGTCGTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWSTAWL*LMSSNL
Trigger: CAGGTTTGACGACATCAGCCACAGCCAGGCCGTGGA...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GCGACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGAGGTTCATCAGCGTCTTaGAGCGCTGCAGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: ATHKGQHVRKCPPIPSSRGSSAS*SAAGHP
Trigger: AGGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACC...TCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GCGACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGATGGGGAGCGTCTACCTaGAGACTTGCCTTGACCCCG +
Preference number: 4 (lower is better)
Translates to: ATHKGQHVRKCPPIPSSRWGAST*RLALTP
Trigger: CGGGGTCAAGGCAAGTCTCCAGGTAGACGCTCCCCA...TCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTGGTAGGCACCGGGGATaGGGAGCGTCTACCTGGAGA +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPGRHRG*GASTWR
Trigger: TCTCCAGGTAGACGCTCCCCATCCCCGGTGCCTACC...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GAGCTCCCTGGGGTCAAACTGAGCTTCTCAATCAGAGTGAGGATTGTCAGAGCATGTGGTAGCGCCCATTaGTCATGCTGGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ELPGVKLSFSIRVRIVRACGSAH*SCWGQG
Trigger: CCCCTGCCCCCAGCATGACCAATGGGCGCTACCACA...TGCTCTGACAATCCTCACTCTGATTGAGAAGCTCAGTTTGACCCCAGGGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GCGACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGATCATGGCTGCCTCCTTaGCCGTCCCCTCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: ATHKGQHVRKCPPIPSSRSWLPP*PSPQFH
Trigger: GTGGAACTGAGGGGACGGCCAAGGAGGCAGCCATGA...TCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGTCTTCAGCTCGCCACTaGGGTTCTTCATGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESESSARH*GSSWLP
Trigger: AGGCAGCCATGAAGAACCCCAGTGGCGAGCTGAAGA...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGAGATAAGCCCGACGGATaGTGTCTACTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGDKPDG*CLLHAG
Trigger: ACCAGCGTGCAGTAGACACCATCCGTCGGGCTTATC...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTGGGTCATGGGATGCGTaGGGAGGGTGCGGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPGSWDA*GGCGLR
Trigger: TCTAAGCCCGCACCCTCCCCACGCATCCCATGACCC...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAGGGGTCTCAGTAACGTaGAGGCCCTCGCTTGCGATG +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVGVSVT*RPSLAM
Trigger: CATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCC...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGGGGTCTCAGTAACGTaGAGGCCCTCGCTTGCGATG +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWGVSVT*RPSLAM
Trigger: CATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp CCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTGTGCTTCGAGCTCCATaGGCCTCTGTGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSSLSLHPGLWPRFHLYIVLRAP*ASVRGW
Trigger: CCAGCCCCGCACAGAGGCTCATGGAGCTCGAAGCAC...AATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR TCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTGCCCATTCACCTCCGTaGTCTTGTCCCCCACGCACA +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPAHSPP*SCPPRT
Trigger: TGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGC...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGCCCATTCACCTCCGTaGTCTTGTCCCCCACGCACA +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWAHSPP*SCPPRT
Trigger: TGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGGGTGTCGGAGGGTGTTaGACCGCACTTCTCCACTAC +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWGVGGC*TALLHY
Trigger: GTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACC...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCCGGACACCATCTTCTaGGCTGGTGTCGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWPDTIF*AGVGGC
Trigger: ACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTCCGGACACCATCTTCTaGGCTGGTGTCGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPPDTIF*AGVGGC
Trigger: ACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGG...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACCCGGACACCATCTTCTaGGCTGGTGTCGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHPDTIF*AGVGGC
Trigger: ACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGG...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTGCCCCCACGGATGTTaGAGCCCAGGCAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWCPHGC*SPGRSR
Trigger: ACGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCA...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCCTGCCGCCCTCCCTTaGAGAAGAGGTTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWPAALP*RRGSSA
Trigger: CGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTACCTGCCGCCCTCCCTTaGAGAAGAGGTTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVPAALP*RRGSSA
Trigger: CGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGG...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTGGACTGCCCTGCTCTTaGGGGCCTCAAAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPGLPCS*GPQKPP
Trigger: TGGAGGCTTTTGAGGCCCTCAAGAGCAGGGCAGTCC...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp TTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCCTGGAGACTTGCCTTaGCCCCGGCTGCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LFICVCDQAASPFTQVYGPGDLP*PRLLRL
Trigger: CAGCCGCAGCAGCCGGGGTCAAGGCAAGTCTCCAGG...GCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTCACAAACACAAATAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR TCA 90 bp CGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCACATCCAATAAGGGACAGCATGTaGGAAAGTGCCCACCAATCC +
Preference number: 4 (lower is better)
Translates to: RRVLNRTSPLPGADSPHPIRDSM*ESAHQS
Trigger: GGATTGGTGGGCACTTTCTCACATGCTGTCCCTTAT...TGGATGTGGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGCGGCTCTCCCAGGCCTaGACCTGCTCATCCACATTA +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWRLSQA*TCSSTL
Trigger: TAATGTGGATGAGCAGGTTCAGGCCTGGGAGAGCCG...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp CGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCACATCCATTCAGCAGCCGTTGTTaGTTCCTTAGCAGGTATCGC +
Preference number: 4 (lower is better)
Translates to: RRVLNRTSPLPGADSPHPFSSRC*FLSRYR
Trigger: GCGATACCTGCTAAGGAAGCAACAACGGCTGCTGAA...TGGATGTGGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTACAGCCCGCTCTGCACTaGTGCCTTCCTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVQPALH*CLPPLC
Trigger: GCAAAGTGGAGGAAGGCAGCAGTGCAGAGCGGGCTG...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACCAGCCCGCTCTGCACTaGTGCCTTCCTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHQPALH*CLPPLC
Trigger: GCAAAGTGGAGGAAGGCAGCAGTGCAGAGCGGGCTG...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCTCATGTGCAGGCGGCTaGTGCTGGTCAGCACCTTTA +
Preference number: 4 (lower is better)
Translates to: WLWWTRAFLQGTTMCLEASCAGG*CWSAPL
Trigger: TAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGA...GGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTGAGGCCGGGGACAGCTaGTGCAGCACCCCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSEAGDS*CSTPLL
Trigger: GAGCAACGGGGTGCTGCAGCAGCTGTCCCCGGCCTC...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAAAGAGACGCTGGAGCTaGTCTCAGAGGCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVKRRWS*SQRPGT
Trigger: TGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTT...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTAAGAGACGCTGGAGCTaGTCTCAGAGGCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPKRRWS*SQRPGT
Trigger: TGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTT...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCACAAAAGAGACGCTGGAGCTaGTCTCAGAGGCCGGGGACA +
Preference number: 4 (lower is better)
Translates to: SGGQELSFREPQCAWKPQKRRWS*SQRPGT
Trigger: TGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTT...TTGTGGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp GCGACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCACAAGCATCACCATaGTGTCGAAGCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ATHKGQHVRKCPPIPSSRPQASP*CRSGPG
Trigger: ACCTGGGCCGCTTCGACAGCATGGTGATGCTTGTGG...TCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTTGGGTGGCGTGTCCTaGCGGGCTGGTCTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPLGGVS*RAGLKA
Trigger: TGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAA...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCCCCGGATCTGGCTCTaGGGAGGGTGCTCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: LFICVCDQAASPFTQVYGPRIWL*GGCSRL
Trigger: GAGCCGAGAGCACCCTCCGCAGAGCCAGATCCGGGG...GCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTCACAAACACAAATAAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp GAGCTCCCTGGGGTCAAACTGAGCTTCTCAATCAGAGTGAGGATTGTCAGAGCAGTCTACCTGGAGACTTaGCTTGACCCCGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ELPGVKLSFSIRVRIVRAVYLET*LDPGCC
Trigger: GCAGCAGCCGGGGTCAAGGCAAGTCTCCAGGTAGAC...TGCTCTGACAATCCTCACTCTGATTGAGAAGCTCAGTTTGACCCCAGGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACGATGCGTGGGGAGGGTaGGGGCTTAGAATCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDDAWGG*GLRIRS
Trigger: ACTCCTGATTCTAAGCCCGCACCCTCCCCACGCATC...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGACTGGGGATAACGGGATaGTGGAGTCAGTGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGLGITG*WSQWVN
Trigger: ATTCACCCACTGACTCCAGCATCCCGTTATCCCCAG...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GCGACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGAGCAGGTGACACAGGCTaGCCACTAGCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ATHKGQHVRKCPPIPSSRAGDTG*PLAPCP
Trigger: AGGACAAGGTGCTAGTGGGCAGCCTGTGTCACCTGC...TCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp CCCCAGCCGCTCCCTCAGCTCCCCATTATCTTCCTCTTCCGGGAAGCCGTTCACTTTCCTTGCACAGAATaGTGCTTGGGGTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: PQPLPQLPIIFLFREAVHFPCTE*CLGLRN
Trigger: ATTCCTCAACCCCAAGCAGCATTCTGTGCAAGGAAA...GTGAACGGCTTCCCGGAAGAGGAAGATAATGGGGAGCTGAGGGAGCGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp TCTGGGGATTGGTGGGAGGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATTTTCATCCGTTTCCTTaGACAGAATGCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SGDWWEVLGASGQELEQHFHPFP*TECCLG
Trigger: CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAA...ATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCAATCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAGCCTCTGTGCGGGGCTaGGGTCTCAGTAACGTGAAG +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVASVRG*GLSNVK
Trigger: CTTCACGTTACTGAGACCCCAGCCCCGCACAGAGGC...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCCTCTGTGCGGGGCTaGGGTCTCAGTAACGTGAAG +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHASVRG*GLSNVK
Trigger: CTTCACGTTACTGAGACCCCAGCCCCGCACAGAGGC...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGAGGTTGTGTATAGGTaGACGATGCGCCGGACACCA +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWEVVYR*TMRRTP
Trigger: TGGTGTCCGGCGCATCGTCCACCTATACACAACCTC...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTCCACGGCCTGGCTGTaGCTGATGTCGTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVSTAWL*LMSSNL
Trigger: CAGGTTTGACGACATCAGCCACAGCCAGGCCGTGGA...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp GCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCACAGCATGATGTGCGTTTaGCCCTTCAGCACCTCCACG +
Preference number: 4 (lower is better)
Translates to: ALVDKSFPSGNHNVPGSHSMMCV*PFSTST
Trigger: CGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCT...GTGGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGGTTCATCAGCGTCTTaGAGCGCTGCAGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWGSSAS*SAAGHP
Trigger: AGGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVGEGKF*PGSRCP
Trigger: TGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCC...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGATCAGATGGAGCTCCCTaGGGTCAAACTGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGSDGAP*GQTELL
Trigger: GAGAAGCTCAGTTTGACCCCAGGGAGCTCCATCTGA...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATAAGGTGACGCTTGGGTaGCGTGTCCTGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TKQPLPSPRFMASFSLVYKVTLG*RVLPGW
Trigger: CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTT...ATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp GTGGTGACCAGCAGATGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCAAAGGTGACGCTTGGGTaGCGTGTCCTGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VVTSRCDKMALVDKSFPSKVTLG*RVLPGW
Trigger: CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTT...TGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACATCTGCTGGTCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGATCTACTGCACGCTGGTaGGTCACCTGCTCTAGATTC +
Preference number: 4 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGSTARW*VTCSRF
Trigger: GAATCTAGAGCAGGTGACCCACCAGCGTGCAGTAGA...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGGCATCAAGGGGTTGGTaGGCAGGCAAGTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWASRGW*AGKWSA
Trigger: TGCTGACCACTTGCCTGCCCACCAACCCCTTGATGC...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGGCAGCATCAAGGGGTTaGTGGGCAGGCAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWAASRG*WAGKWS
Trigger: TGACCACTTGCCTGCCCACCAACCCCTTGATGCTGC...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGCCAGTGGGCAGGAACTaGAGCAGCATCAAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWPVGRN*SSIKGL
Trigger: CAACCCCTTGATGCTGCTCCAGTTCCTGCCCACTGG...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACGAGTCTGGGGATTGGTaGGAGGTTCTGGGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDESGDW*EVLGAS
Trigger: ACTGGCTCCCAGAACCTCCCACCAATCCCCAGACTC...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACCATGGGCTGCACCTTGGACTCAATGCCCCCAGAAATGCTGATACCTAAGGACGTGTCCCTGGAGGCTTaGGCGACTCATAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: TMGCTLDSMPPEMLIPKDVSLEA*ATHKGQ
Trigger: CTGTCCCTTATGAGTCGCCCAAGCCTCCAGGGACAC...GTCCTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CCA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATAACATACCGGGAGCAGTaGCGGGTGACAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: DQAASPFTQVYGLVFTCITYREQ*RVTAST
Trigger: GGTGCTGGCTGTCACCCGCCACTGCTCCCGGTATGT...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
3UTR CAA 72 bp CAGTGCCTAGGGATCTGTCCCTTAAACCATTCTGACTaGAGGGTTGGCCCTGTCTCCCCATCAATCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QCLGICPLNHSD*RVGPVSPSIRP
Trigger: GGGCCTGATTGATGGGGAGACAGGGCCAACCCTCAAGTCAGAATGGTTTAAGGGACAGATCCCTAGGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGGTGTCGGAGGGTGTTaGACCGCACTTCTCCACTAC +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHGVGGC*TALLHY
Trigger: GTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACC...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp GAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAAGGTGTCGGAGGGTGTTaGACCGCACTTCTCCACTAC +
Preference number: 4 (lower is better)
Translates to: EPQCAWKPQLPLVGKEVEGVGGC*TALLHY
Trigger: GTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACC...TTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGTGCCCCCAGAAATGCTaGTACCTAAGGACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESECPQKC*YLRTAS
Trigger: TGAAGCAGTCCTTAGGTATCAGCATTTCTGGGGGCA...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGAATGCTGCTTGGGGTTaGGGAATGGATGCATTGACC +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESENAAWG*GMDALT
Trigger: GGTCAATGCATCCATTCCTCAACCCCAAGCAGCATT...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp CTTCCTGCCTCAGCCCTCACTTGGACACATAGATGCCCAGGCCAAACTCCTTGCGACCCCAACGTGAAATaGTCTCTCAGGATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPASALTWTHRCPGQTPCDPNVK*SLRISG
Trigger: CCCTGAAATCCTGAGAGATCATTTCACGTTGGGGTC...GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAGTGAGGGCTGAGGCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGAGGCGCAGGTCGCAGTaGGCTGAGATGGTGCCATTA +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWRRRSQ*AEMVPL
Trigger: TAATGGCACCATCTCAGCTCACTGCGACCTGCGCCT...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645349.1
CDS-3UTR GCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGGTGAAGGCCCTCGCTTaGGATGCCTCTCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWVKALA*DASQKC
Trigger: ACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCAC...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GTGGTGACCAGCAGATGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCAGAAGCCCAGCCTCCCTaGTGGACTCTTCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: VVTSRCDKMALVDKSFPSEAQPP*WTLLHP
Trigger: CGGGTGGAGAAGAGTCCAGCAGGGAGGCTGGGCTTC...TGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACATCTGCTGGTCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp GTGGTGACCAGCAGATGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCACGCCGAACCATCATGTaGAGGCGGCTGCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VVTSRCDKMALVDKSFPSRRTIM*RRLLLV
Trigger: GACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCG...TGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACATCTGCTGGTCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp TGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCTGTATAGGTGGACGATaGGCCGGACACCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: WLWWTRAFLQGTTMCLEACIGGR*AGHHLL
Trigger: CAGAAGATGGTGTCCGGCGCATCGTCCACCTATACA...GGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCCCTGACACCGTTGGCTaGCAGGACCTGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RISGTRKAFHPFPCTECCPDTVG*QDLVPH
Trigger: GTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGG...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTCTGCCGGGCTCCTCCTaGCCGAGGCAGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSLPGSS*PRQMSM
Trigger: CATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAG...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCTGCCGGGCTCCTCCTaGCCGAGGCAGATGTCCATG +
Preference number: 4 (lower is better)
Translates to: CDKMALVDKSFPSGNHNVLPGSS*PRQMSM
Trigger: CATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAG...CACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTCCTTCTTCCGCTGCTaGTTCTCCTCCCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVSFFRC*FSSHKV
Trigger: GACCTTGTGGGAGGAGAAGCAGCAGCGGAAGAAGGA...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTCGCTGGTGGGTCACCTaGTCTAGATTCTCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPRWWVT*SRFSPS
Trigger: GGACGGAGAGAATCTAGAGCAGGTGACCCACCAGCG...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGCTGGGGATAACGGGATaGTGGAGTCAGTGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWLGITG*WSQWVN
Trigger: ATTCACCCACTGACTCCAGCATCCCGTTATCCCCAG...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGCCTTGCACAGAATGCTaGTTGGGGTTGAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: GRRGPGDNGMLESVGESEPCTEC*LGLRNG
Trigger: TCCATTCCTCAACCCCAAGCAGCATTCTGTGCAAGG...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCCGGCGCTACCCATGGTaGTGCTCTCCAGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RISGTRKAFHPFPCTECCRRYPW*CSPGSA
Trigger: GGCTGAGCCTGGAGAGCACCACCATGGGTAGCGCCG...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTTACGGCGCTACCCATaGTGGTGCTCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWLRRYP*WCSPGS
Trigger: TGAGCCTGGAGAGCACCACCATGGGTAGCGCCGTAA...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTATTACGGCGCTACCCATaGTGGTGCTCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVLRRYP*WCSPGS
Trigger: TGAGCCTGGAGAGCACCACCATGGGTAGCGCCGTAA...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGCCACATCCACCCACGTaGTCTTCTCCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWPHPPT*SSPWRT
Trigger: AGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGG...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGGAGGTTGTGTATAGGTaGACGATGCGCCGGACACCA +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWEVVYR*TMRRTP
Trigger: TGGTGTCCGGCGCATCGTCCACCTATACACAACCTC...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp TTCAGGGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGAGGTTGTGTATAGGTaGACGATGCGCCGGACACCA +
Preference number: 4 (lower is better)
Translates to: FREPQCAWKPQLPLVGKEEVVYR*TMRRTP
Trigger: TGGTGTCCGGCGCATCGTCCACCTATACACAACCTC...TTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTCCACGGCCTGGCTGTaGCTGATGTCGTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPSTAWL*LMSSNL
Trigger: CAGGTTTGACGACATCAGCCACAGCCAGGCCGTGGA...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAATCCACGGCCTGGCTGTaGCTGATGTCGTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: EPQCAWKPQLPLVGKEVESTAWL*LMSSNL
Trigger: CAGGTTTGACGACATCAGCCACAGCCAGGCCGTGGA...TTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTCCACGGCCTGGCTGTaGCTGATGTCGTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWSTAWL*LMSSNL
Trigger: CAGGTTTGACGACATCAGCCACAGCCAGGCCGTGGA...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGAGCATGATGTGCGTTTaGCCCTTCAGCACCTCCACG +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVSMMCV*PFSTST
Trigger: CGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCT...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGCAGCAAAGCCGTCTTaGGAGACTCAGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWAAKPS*ETQRAQ
Trigger: CTGCGCTCTCTGAGTCTCCCAAGACGGCTTTGCTGC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATAGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: DQAASPFTQVYGLVFTCIGEGKF*PGSRCP
Trigger: TGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCC...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGTGTGGTAGCGCCCATTaGTCATGCTGGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRCGSAH*SCWGQG
Trigger: CCCCTGCCCCCAGCATGACCAATGGGCGCTACCACA...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATAGAGGAGTCTGGGGATTaGTGGGAGGTTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: DQAASPFTQVYGLVFTCIEESGD*WEVLGA
Trigger: GGCTCCCAGAACCTCCCACCAATCCCCAGACTCCTC...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTTGGCTGGAGGAGCCTaGCATCAGTGGGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPLAGGA*HQWEES
Trigger: AGACTCCTCCCACTGATGCCAGGCTCCTCCAGCCAA...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGGAGAGTCTGTGTCCCTaGAGGCTTGGGCGACTCATA +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWESLCP*RLGRLI
Trigger: TATGAGTCGCCCAAGCCTCCAGGGACACAGACTCTC...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
3UTR CAA 72 bp CCCCCAGAAATGCTGATACCTAAGGACTGCTTCATCTaGGACAGTGTCACTGTCTTCAGCTCGCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: PPEMLIPKDCFI*DSVTVFSSPLG
Trigger: CCCCAGTGGCGAGCTGAAGACAGTGACACTGTCCAAGATGAAGCAGTCCTTAGGTATCAGCATTTCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp CCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTGGGGTCTCAGTAACGTaGAGGCCCTCGCTTGCGATG +
Preference number: 4 (lower is better)
Translates to: PSSLSLHPGLWPRFHLYIGVSVT*RPSLAM
Trigger: CATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCC...AATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR TCA 90 bp TGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCCTTCTCCACCCGGACTaGATGGATGATGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: WLWWTRAFLQGTTMCLEALLHPD*MDDVTF
Trigger: GAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAG...GGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTACTTCCTCCACTTTGCTaGCGAAGATGCCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVLPPLC*RRCPGH
Trigger: ATGGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAAG...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCTTCCTCCACTTTGCTaGCGAAGATGCCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWLPPLC*RRCPGH
Trigger: ATGGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAAG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGCCTGCCGCCCTCCCTTaGAGAAGAGGTTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRPAALP*RRGSSA
Trigger: CGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGG...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGTCCCCTGCCATTCACTaGGATTGGAGTCACATCCTA +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWSPAIH*DWSHIL
Trigger: TAGGATGTGACTCCAATCTCAGTGAATGGCAGGGGA...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATAGAGGAATGGATGCATTaGCCCCTTCAGGGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: DQAASPFTQVYGLVFTCIEEWMH*PLQGPV
Trigger: GACAGGGCCCTGAAGGGGTCAATGCATCCATTCCTC...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR TCA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGAATGCTGCTTGGGGTTaGGGAATGGATGCATTGACC +
Preference number: 4 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWNAAWG*GMDALT
Trigger: GGTCAATGCATCCATTCCTCAACCCCAAGCAGCATT...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGTGAAGGCCCTCGCTTaGGATGCCTCTCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWVKALA*DASQKC
Trigger: ACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCAC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCTGGGTCGAAGCCCACTaGGAAACCCTGCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: LFICVCDQAASPFTQVYGWVEAH*ETLRHG
Trigger: GCCATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCA...GCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTCACAAACACAAATAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTCATGTGCAGGCGGCTaGTGCTGGTCAGCACCTTTA +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWSCAGG*CWSAPL
Trigger: TAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGA...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACTCATGTGCAGGCGGCTaGTGCTGGTCAGCACCTTTA +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHSCAGG*CWSAPL
Trigger: TAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGA...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTCCTTCTTCCGCTGCTaGTTCTCCTCCCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPSFFRC*FSSHKV
Trigger: GACCTTGTGGGAGGAGAAGCAGCAGCGGAAGAAGGA...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGACACTCCTGATGTCCTaGAGCAGTAGCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWTLLMS*SSSSFS
Trigger: GGAGAAGCTGCTACTGCTGCAGGACATCAGGAGTGT...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTGGCTCTGCGGAGGGTaGTCTCGGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: RISGTRKAFHPFPCTECCWLCGG*SRLRGS
Trigger: AGAACCCCTGAGCCGAGAGCACCCTCCGCAGAGCCA...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACATCTTCACCATGGGCTaGACCTTGGACTCAATGCCC +
Preference number: 4 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDIFTMG*TLDSMP
Trigger: GGGCATTGAGTCCAAGGTGCAGCCCATGGTGAAGAT...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGATGCACACGTGTCATaGCAGCACTTTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWDAHVS*QHFGRL
Trigger: CAGCCTCCCAAAGTGCTGGCATGACACGTGTGCATC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645349.1
CDS-3UTR CCA 90 bp CCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTGCCTCTGTGCGGGGCTaGGGTCTCAGTAACGTGAAG +
Preference number: 4 (lower is better)
Translates to: PSSLSLHPGLWPRFHLYIASVRG*GLSNVK
Trigger: CTTCACGTTACTGAGACCCCAGCCCCGCACAGAGGC...AATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp GGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGACCACATCCACCCACGTaGTCTTCTCCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: GTTMCLEATTAPSGERSRPHPPT*SSPWRT
Trigger: AGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGG...TCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCCACATCCACCCACGTaGTCTTCTCCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVPHPPT*SSPWRT
Trigger: AGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCACCATCTTCTGAGCTaGTGTCGGAGGGTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVHHLLS*CRRVLN
Trigger: GTTCAACACCCTCCGACACCAGCTCAGAAGATGGTG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAGAGGTTGTGTATAGGTaGACGATGCGCCGGACACCA +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVEVVYR*TMRRTP
Trigger: TGGTGTCCGGCGCATCGTCCACCTATACACAACCTC...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGGAGGTTGTGTATAGGTaGACGATGCGCCGGACACCA +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWEVVYR*TMRRTP
Trigger: TGGTGTCCGGCGCATCGTCCACCTATACACAACCTC...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAAGCATGATGTGCGTTTaGCCCTTCAGCACCTCCACG +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVSMMCV*PFSTST
Trigger: CGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCT...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGGCAGCAAAGCCGTCTTaGGAGACTCAGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGAAKPS*ETQRAQ
Trigger: CTGCGCTCTCTGAGTCTCCCAAGACGGCTTTGCTGC...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATAATCCCTTTATGGGGGTaGCGAGGGGCAGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: DQAASPFTQVYGLVFTCIIPLWG*RGAEAL
Trigger: AAGTGCCTCTGCCCCTCGCCACCCCCATAAAGGGAT...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTCCCATCCAGAGGTCGTaGCAGAGGGGGTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSPIQRS*QRGSGL
Trigger: AAGGCCAGACCCCCTCTGCCACGACCTCTGGATGGG...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATCACTGGGGTTCTTCATaGCTGCCTCCTTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: TKQPLPSPRFMASFSLVYHWGSS*LPPWPS
Trigger: GGACGGCCAAGGAGGCAGCCATGAAGAACCCCAGTG...ATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTCTTCAGCTCGCCACTaGGGTTCTTCATGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPSSARH*GSSWLP
Trigger: AGGCAGCCATGAAGAACCCCAGTGGCGAGCTGAAGA...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGATCTCTATCTTCACCATaGGCTGCACCTTGGACTCAA +
Preference number: 4 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGSLSSP*AAPWTQ
Trigger: TTGAGTCCAAGGTGCAGCCCATGGTGAAGATAGAGA...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGGGATGCTGGAGTCAGTaGGTGAATCTGAGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWGCWSQ*VNLRLG
Trigger: CCCTAACCTCAGATTCACCCACTGACTCCAGCATCC...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAAGGGGTTTCGCCATGTTaGCCAGGTTGGTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: EPQCAWKPQLPLVGKEVEGVSPC*PGWSLL
Trigger: GAGTAGAGACCAACCTGGCCAACATGGCGAAACCCC...TTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp TTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCTGCCTCTCAGAAGTGTaGGCTCCAGGCCTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: LFICVCDQAASPFTQVYGCLSEV*APGLVA
Trigger: AGCGACCAGGCCTGGAGCTCACACTTCTGAGAGGCA...GCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTCACAAACACAAATAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR TCA 90 bp TGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGTGCCCCCACGGATGTTaGAGCCCAGGCAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: CDKMALVDKSFPSGNHNVCPHGC*SPGRSR
Trigger: ACGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCA...CACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGACTCCTGGGCTCAAGTaGTCTTGCTGCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWTPGLK*SCCFSF
Trigger: GAAGCTGAAGCAGCAAGATCACTTGAGCCCAGGAGT...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACTGTATAGGTGGACGATaGGCCGGACACCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHCIGGR*AGHHLL
Trigger: CAGAAGATGGTGTCCGGCGCATCGTCCACCTATACA...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTGTATAGGTGGACGATaGGCCGGACACCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWCIGGR*AGHHLL
Trigger: CAGAAGATGGTGTCCGGCGCATCGTCCACCTATACA...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCTTTGGACACATAGATaGCCAGGCCAAACTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVLWTHR*PGQTPC
Trigger: GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAAG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp GCGACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGAACTTGGACACATAGATaGCCAGGCCAAACTCCTTGC +
Preference number: 4 (lower is better)
Translates to: ATHKGQHVRKCPPIPSSRTWTHR*PGQTPC
Trigger: GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAGT...TCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATACGGATGGTGTCTACTaGACGCTGGTGGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: TKQPLPSPRFMASFSLVYTDGVY*TLVGHL
Trigger: CAGGTGACCCACCAGCGTGCAGTAGACACCATCCGT...ATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGGCAGGTGACACAGGCTaGCCACTAGCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRAGDTG*PLAPCP
Trigger: AGGACAAGGTGCTAGTGGGCAGCCTGTGTCACCTGC...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp CCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTTCTATGCCTCCCTCGTaGACATACCGGGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSSLSLHPGLWPRFHLYISMPPS*TYREQW
Trigger: CCACTGCTCCCGGTATGTGCACGAGGGAGGCATAGA...AATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGTTACGGCGCTACCCATaGTGGTGCTCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRLRRYP*WCSPGS
Trigger: TGAGCCTGGAGAGCACCACCATGGGTAGCGCCGTAA...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCACCATGGTCCACTTTaGACACATAGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWHHGPL*THRCPG
Trigger: GCCTGGGCATCTATGTGTCCAAAGTGGACCATGGTG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACCACCATGGTCCACTTTaGACACATAGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHHHGPL*THRCPG
Trigger: GCCTGGGCATCTATGTGTCCAAAGTGGACCATGGTG...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGGCAGCAAAGCCGTCTTaGGAGACTCAGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRAAKPS*ETQRAQ
Trigger: CTGCGCTCTCTGAGTCTCCCAAGACGGCTTTGCTGC...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGTTGGCTGGAGGAGCCTaGCATCAGTGGGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRLAGGA*HQWEES
Trigger: AGACTCCTCCCACTGATGCCAGGCTCCTCCAGCCAA...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTGGGATAACGGGATGCTaGAGTCAGTGGGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPGITGC*SQWVNL
Trigger: CAGATTCACCCACTGACTCCAGCATCCCGTTATCCC...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTTCCACATTAGGCAGCTaGCTGGAGGGACTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: PSSLSLHPGLWPRFHLYISTLGS*LEGLPD
Trigger: GTCTGGGAGTCCCTCCAGCCAGCTGCCTAATGTGGA...AATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp TGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGGCCTCCCGGAGTAGCTaGGATTACAGGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: CDKMALVDKSFPSGNHNVASRSS*DYRRAP
Trigger: TGGTGCACGCCTGTAATCCCAGCTACTCCGGGAGGC...CACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACCTTCTCCACCCGGACTaGATGGATGATGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHLLHPD*MDDVTF
Trigger: GAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAG...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTCTTCTCCACCCGGACTaGATGGATGATGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPLLHPD*MDDVTF
Trigger: GAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAG...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCTTCTCCACCCGGACTaGATGGATGATGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWLLHPD*MDDVTF
Trigger: GAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGCTTCCTCCACTTTGCTaGCGAAGATGCCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRLPPLC*RRCPGH
Trigger: ATGGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAAG...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGGAAAGTGGAAAGATGTaGGCCACCAGTGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGESGKM*ATSVAL
Trigger: CAGTGCCACACTGGTGGCTCACATCTTTCCACTTTC...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATGTCTCAGTCTCCAGGTaGCAAACTTCTGTACCGGGC +
Preference number: 4 (lower is better)
Translates to: TKQPLPSPRFMASFSLVYVSVSR*QTSVPG
Trigger: GCCCGGTACAGAAGTTTGTCACCTGGAGACTGAGAC...ATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTTCAGCAGCCGTTGTTaGTTCCTTAGCAGGTATCGC +
Preference number: 4 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPFSSRC*FLSRYR
Trigger: GCGATACCTGCTAAGGAAGCAACAACGGCTGCTGAA...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACTTCAGCAGCCGTTGTTaGTTCCTTAGCAGGTATCGC +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHFSSRC*FLSRYR
Trigger: GCGATACCTGCTAAGGAAGCAACAACGGCTGCTGAA...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR GCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGTCTATGCCTCCCTCGTaGACATACTTTCTCTATGTC +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVSMPPS*TYFLYV
Trigger: GACATAGAGAAAGTATGTGCACGAGGGAGGCATAGA...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTCCACAAGCATCACCATaGTGTCGAAGCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSPQASP*CRSGPG
Trigger: ACCTGGGCCGCTTCGACAGCATGGTGATGCTTGTGG...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCACAAGCATCACCATaGTGTCGAAGCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: CDKMALVDKSFPSGNHNVPQASP*CRSGPG
Trigger: ACCTGGGCCGCTTCGACAGCATGGTGATGCTTGTGG...CACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGCTGATACCTAAGGACTaGTTCATCTTGGACAGTGTC +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVLIPKD*FILDSV
Trigger: GACACTGTCCAAGATGAAGCAGTCCTTAGGTATCAG...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGATTCTCTCCGTCCACTaGCACAAGCTCGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRILSVH*HKLEAS
Trigger: GCTGGCTTCGAGCTTGTGGCAGTGGACGGAGAGAAT...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGTTTCATCCGTTTCCTTaGACAGAATGCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWFHPFP*TECCLG
Trigger: CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAA...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTCACCAGGTCCTCTATaGCTCCCTCGTGCACATACC +
Preference number: 4 (lower is better)
Translates to: TKQPLPSPRFMASFSLVYSPGPL*LPRAHT
Trigger: GGTATGTGCACGAGGGAGGCATAGAGGACCTGGTGA...ATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGCACCATCTTCTGAGCTaGTGTCGGAGGGTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGHHLLS*CRRVLN
Trigger: GTTCAACACCCTCCGACACCAGCTCAGAAGATGGTG...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGGTAATCCTAGCACTTTaGGAGACTAAGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVVILAL*ETKAGR
Trigger: TCTACCCGCCTTAGTCTCCCAAAGTGCTAGGATTAC...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGTCAGTGGGAGGAGTCTaGGGATTGGTGGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRSVGGV*GLVGGS
Trigger: AGAACCTCCCACCAATCCCCAGACTCCTCCCACTGA...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGGGATGCTGGAGTCAGTaGGTGAATCTGAGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGGCWSQ*VNLRLG
Trigger: CCCTAACCTCAGATTCACCCACTGACTCCAGCATCC...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTACCCGGACTGAATGGATaGTGTCACTTTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVPGLNG*CHFHHC
Trigger: ACAGTGATGAAAGTGACATCATCCATTCAGTCCGGG...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACCCCGGACTGAATGGATaGTGTCACTTTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHPGLNG*CHFHHC
Trigger: ACAGTGATGAAAGTGACATCATCCATTCAGTCCGGG...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR TCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGAGCCCAGGCCATGCTCTaGGCCCCCGCGCACGCTGAA +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRAQAML*APAHAE
Trigger: TTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGC...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGGAAAGTGGAAAGATGTaGGCCACCAGTGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRESGKM*ATSVAL
Trigger: CAGTGCCACACTGGTGGCTCACATCTTTCCACTTTC...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATAGACCCCAACGTGAAATaGTCTCTCAGGATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: DQAASPFTQVYGLVFTCIDPNVK*SLRISG
Trigger: CCCTGAAATCCTGAGAGATCATTTCACGTTGGGGTC...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTCCCACTGCGAAACCCTaGGCCATGGCGGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFPTAKP*AMAAGL
Trigger: TAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGG...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR GCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTAAGATGCCCAGGCCATaGTCTGAGCCCCCGCGCACG +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFKMPRP*SEPPRT
Trigger: CGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTT...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR GCA 90 bp ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTGTATAGGTGGACGATaGGCCGGACACCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: TKQPLPSPRFMASFSLVYCIGGR*AGHHLL
Trigger: CAGAAGATGGTGTCCGGCGCATCGTCCACCTATACA...ATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGTCTGCTTACCTGCACTaGTGCCTTCCTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRSAYLH*CLPPLC
Trigger: GCAAAGTGGAGGAAGGCAGCAGTGCAGGTAAGCAGA...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp GCGACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACTGATACCTAAGGACTaGTTCATCTTGGACAGTGTC +
Preference number: 4 (lower is better)
Translates to: ATHKGQHVRKCPPIPSSRLIPKD*FILDSV
Trigger: GACACTGTCCAAGATGAAGCAGTCCTTAGGTATCAG...TCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTATTCTCTCCGTCCACTaGCACAAGCTCGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSILSVH*HKLEAS
Trigger: GCTGGCTTCGAGCTTGTGGCAGTGGACGGAGAGAAT...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCGGGTTGAGGAATGGATaGATTGACCCCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RISGTRKAFHPFPCTECCGLRNG*IDPFRA
Trigger: GGCCCTGAAGGGGTCAATGCATCCATTCCTCAACCC...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR GCA 90 bp GCGACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGATTTCCTTGCACAGAATaGTGCTTGGGGTTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: ATHKGQHVRKCPPIPSSRFPCTE*CLGLRN
Trigger: ATTCCTCAACCCCAAGCAGCATTCTGTGCAAGGAAA...TCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTCCACCCGGACTGAATaGATGATGTCACTTTCATCA +
Preference number: 4 (lower is better)
Translates to: GSSDLAASASRVVGIGQVSTRTE*MMSLSS
Trigger: TGATGAAAGTGACATCATCCATTCAGTCCGGGTGGA...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp CCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTCCACATCCACCCACGTaGTCTTCTCCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: PSSLSLHPGLWPRFHLYIPHPPT*SSPWRT
Trigger: AGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGG...AATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp GTGGTGACCAGCAGATGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCACACCATCTTCTGAGCTaGTGTCGGAGGGTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: VVTSRCDKMALVDKSFPSHHLLS*CRRVLN
Trigger: GTTCAACACCCTCCGACACCAGCTCAGAAGATGGTG...TGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACATCTGCTGGTCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGCACCATGGTCCACTTTaGACACATAGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRHHGPL*THRCPG
Trigger: GCCTGGGCATCTATGTGTCCAAAGTGGACCATGGTG...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTAGCATGATGTGCGTTTaGCCCTTCAGCACCTCCACG +
Preference number: 4 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSSMMCV*PFSTST
Trigger: CGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCT...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGTAATCCTAGCACTTTaGGAGACTAAGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHVILAL*ETKAGR
Trigger: TCTACCCGCCTTAGTCTCCCAAAGTGCTAGGATTAC...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCTGGTCTTAAACTCCTaGGCTCAAGTGATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSDLAASASRVVGIGQVWLVLNS*AQVILL
Trigger: CAGCAAGATCACTTGAGCCCAGGAGTTTAAGACCAG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTACTGGTCTTAAACTCCTaGGCTCAAGTGATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVLVLNS*AQVILL
Trigger: CAGCAAGATCACTTGAGCCCAGGAGTTTAAGACCAG...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp TTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCGTGTCTACTGCACGCTaGTGGGTCACCTGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: LFICVCDQAASPFTQVYGVSTAR*WVTCSR
Trigger: TCTAGAGCAGGTGACCCACCAGCGTGCAGTAGACAC...GCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTCACAAACACAAATAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGCTAGCACCTTGTCCTTaGACACTAAGGCAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGLAPCP*TLRQSL
Trigger: AAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAG...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGCTTCACCCAGGTTTATaGCCTCGTTTTCACTTGTAT +
Preference number: 4 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVLHPGL*PRFHLY
Trigger: ATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAG...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp TTCAGGGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGCAGATGTGATAAAATaGCTCTGGTGGACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: FREPQCAWKPQLPLVGKEADVIK*LWWTRA
Trigger: AGCTCTTGTCCACCAGAGCCATTTTATCACATCTGC...TTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644782.1
3UTR CAA 72 bp GGGAAGATCTTCTCTATCTTCACCATGGGCTGCACCTaGGACTCAATGCCCCCAGAAATGCTGATACCTAAG +
Preference number: 4 (lower is better)
Translates to: GKIFSIFTMGCT*DSMPPEMLIPK
Trigger: CTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGTGAAGATAGAGAAGATCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR TCA 90 bp ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATCTTCTCCACCCGGACTaGATGGATGATGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: TKQPLPSPRFMASFSLVYLLHPD*MDDVTF
Trigger: GAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAG...ATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR TCA 90 bp CCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTATAAGGGACAGCATGTaGGAAAGTGCCCACCAATCC +
Preference number: 4 (lower is better)
Translates to: PSSLSLHPGLWPRFHLYIIRDSM*ESAHQS
Trigger: GGATTGGTGGGCACTTTCTCACATGCTGTCCCTTAT...AATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTGCTGAGTGTTCCCAGTaGCTAGGGATCTGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSAECSQ*LGICPL
Trigger: TAAGGGACAGATCCCTAGGCACTGGGAACACTCAGC...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp TCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCACAATCTATGCCTCCCTCGTaGACATACTTTCTCTATGTC +
Preference number: 4 (lower is better)
Translates to: SGGQELSFREPQCAWKPQSMPPS*TYFLYV
Trigger: GACATAGAGAAAGTATGTGCACGAGGGAGGCATAGA...TTGTGGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTCACCAGGTCCTCTATaGCTCCCTCGTGCACATACT +
Preference number: 4 (lower is better)
Translates to: RISGTRKAFHPFPCTECCSPGPL*LPRAHT
Trigger: AGTATGTGCACGAGGGAGGCATAGAGGACCTGGTGA...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR GCA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCATCTTCACCATGGGCTaGACCTTGGACTCAATGCCC +
Preference number: 4 (lower is better)
Translates to: RISGTRKAFHPFPCTECCIFTMG*TLDSMP
Trigger: GGGCATTGAGTCCAAGGTGCAGCCCATGGTGAAGAT...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGATGTGAGCTCCAGGCCTaGTCGCTGGTGTGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRCELQA*SLVWRR
Trigger: GCGGCGCCACACCAGCGACCAGGCCTGGAGCTCACA...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACTCCACCCGGACTGAATaGATGATGTCACTTTCATCA +
Preference number: 4 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHSTRTE*MMSLSS
Trigger: TGATGAAAGTGACATCATCCATTCAGTCCGGGTGGA...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CCA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCCACCATCTTCTGAGCTaGTGTCGGAGGGTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: RISGTRKAFHPFPCTECCHHLLS*CRRVLN
Trigger: GTTCAACACCCTCCGACACCAGCTCAGAAGATGGTG...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTTGCCTCTCAGAAGTGTaGGCTCCAGGCCTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFCLSEV*APGLVA
Trigger: AGCGACCAGGCCTGGAGCTCACACTTCTGAGAGGCA...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR TCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTGCCCATTCACCTCCGTaGTCTTGTCCCCCACGCACA +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFAHSPP*SCPPRT
Trigger: TGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGC...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR TCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTTCTCCTTGGAGAACTTaGTGCCCGGCACACGGCCCA +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFSPWRT*CPAHGP
Trigger: TGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGA...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR TCA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTGCCCCCAGAAATGCTaGTACCTAAGGACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RISGTRKAFHPFPCTECCCPQKC*YLRTAS
Trigger: TGAAGCAGTCCTTAGGTATCAGCATTTCTGGGGGCA...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGATGGGCTCTGGGACTCTaGCTGACCAGGCACGGGGGT +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRWALGL*LTRHGG
Trigger: ACCCCCGTGCCTGGTCAGTCAGAGTCCCAGAGCCCA...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp TCTCAGAGGTTACTGCATAGAATGAGACTAGATTTTAAAAGTGAGTGGGTTTCATGGGTCGAAGCCCACTaGGAAACCCTGCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SQRLLHRMRLDFKSEWVSWVEAH*ETLRHG
Trigger: GCCATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCA...TGAAACCCACTCACTTTTAAAATCTAGTCTCATTCTATGCAGTAACCTCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCCTTTGGACACATAGATaGCCAGGCCAAACTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RISGTRKAFHPFPCTECCLWTHR*PGQTPC
Trigger: GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAAG...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR GCA 90 bp TTCAGGGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAACATTTTAATGCTTCCTaGTGGAATCGTTACCGTTCT +
Preference number: 4 (lower is better)
Translates to: FREPQCAWKPQLPLVGKEHFNAS*WNRYRS
Trigger: AGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG...TTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGAGCCTGGTCGCTGGTGTaGCGCCGCCAGCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRAWSLV*RRQPCQ
Trigger: TTGACAAGGCTGGCGGCGCCACACCAGCGACCAGGC...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTGGTTCATCAGCGTCTTaGAGCGCTGCAGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFGSSAS*SAAGHP
Trigger: AGGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACC...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR CCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFGEGKF*PGSRCP
Trigger: TGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCC...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR CCA 90 bp TCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCACAAATAAAATGGCTCTGGTaGACAAGAGCTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGGQELSFREPQCAWKPQIKWLW*TRAFLQ
Trigger: CTGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTAT...TTGTGGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCCCCGGACTGAATGGATaGTGTCACTTTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: RISGTRKAFHPFPCTECCPGLNG*CHFHHC
Trigger: ACAGTGATGAAAGTGACATCATCCATTCAGTCCGGG...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR TCA 90 bp TCTCAGAGGTTACTGCATAGAATGAGACTAGATTTTAAAAGTGAGTGGGTTTCACCTGCCGCCCTCCCTTaGAGAAGAGGTTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: SQRLLHRMRLDFKSEWVSPAALP*RRGSSA
Trigger: CGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGG...TGAAACCCACTCACTTTTAAAATCTAGTCTCATTCTATGCAGTAACCTCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTGCCTGGGCAACAGGGTaGAACCCCCATCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFAWATG*NPHLFL
Trigger: GAGAAAGAGATGGGGGTTTCACCCTGTTGCCCAGGC...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR TCA 90 bp CCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTGTTTATTTGTGTTTGTaGCCAAGCAGCCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PSSLSLHPGLWPRFHLYIVYLCL*PSSLSL
Trigger: AAGGGAGAGGCTGCTTGGTCACAAACACAAATAAAC...AATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp TCTCAGAGGTTACTGCATAGAATGAGACTAGATTTTAAAAGTGAGTGGGTTTCAGCCTCTGTGCGGGGCTaGGGTCTCAGTAACGTGAAG +
Preference number: 4 (lower is better)
Translates to: SQRLLHRMRLDFKSEWVSASVRG*GLSNVK
Trigger: CTTCACGTTACTGAGACCCCAGCCCCGCACAGAGGC...TGAAACCCACTCACTTTTAAAATCTAGTCTCATTCTATGCAGTAACCTCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGATGCCTCTCAGAAGTGTaGGCTCCAGGCCTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRCLSEV*APGLVA
Trigger: AGCGACCAGGCCTGGAGCTCACACTTCTGAGAGGCA...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGAGGACTGCCCTGCTCTTaGGGGCCTCAAAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRGLPCS*GPQKPP
Trigger: TGGAGGCTTTTGAGGCCCTCAAGAGCAGGGCAGTCC...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTTCCTTCTTCCGCTGCTaGTTCTCCTCCCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFSFFRC*FSSHKV
Trigger: GACCTTGTGGGAGGAGAAGCAGCAGCGGAAGAAGGA...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR GCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGAGGAATCTCACTCTGTTaGCCAGGCGTGGTGGCGCGA +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRGISLC*PGVVAR
Trigger: TCGCGCCACCACGCCTGGGCAACAGAGTGAGATTCC...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp TTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCTCCACCCGGACTGAATaGATGATGTCACTTTCATCA +
Preference number: 4 (lower is better)
Translates to: LFICVCDQAASPFTQVYGSTRTE*MMSLSS
Trigger: TGATGAAAGTGACATCATCCATTCAGTCCGGGTGGA...GCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTCACAAACACAAATAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGAGGTTCATCAGCGTCTTaGAGCGCTGCAGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRGSSAS*SAAGHP
Trigger: AGGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACC...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR TCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTACTCCTGGGCTCAAGTaGTCTTGCTGCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFTPGLK*SCCFSF
Trigger: GAAGCTGAAGCAGCAAGATCACTTGAGCCCAGGAGT...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR GCA 90 bp TCTCAGAGGTTACTGCATAGAATGAGACTAGATTTTAAAAGTGAGTGGGTTTCAGTGAAGGCCCTCGCTTaGGATGCCTCTCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SQRLLHRMRLDFKSEWVSVKALA*DASQKC
Trigger: ACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCAC...TGAAACCCACTCACTTTTAAAATCTAGTCTCATTCTATGCAGTAACCTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTCCACATCCACCCACGTaGTCTTCTCCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFPHPPT*SSPWRT
Trigger: AGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGG...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR CCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGAGCAGCAAAGCCGTCTTaGGAGACTCAGAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRAAKPS*ETQRAQ
Trigger: CTGCGCTCTCTGAGTCTCCCAAGACGGCTTTGCTGC...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGAGTGGTGGCGCGATTTTaGCTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRVVARF*LTATST
Trigger: GGTGGAGGTTGCAGTGAGCCAAAATCGCGCCACCAC...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTTTCAGCAGCCGTTGTTaGTTCCTTAGCAGGTATCGC +
Preference number: 4 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFFSSRC*FLSRYR
Trigger: GCGATACCTGCTAAGGAAGCAACAACGGCTGCTGAA...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR GCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGATCCTTCTTCCGCTGCTaGTTCTCCTCCCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRSFFRC*FSSHKV
Trigger: GACCTTGTGGGAGGAGAAGCAGCAGCGGAAGAAGGA...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp TCTCAGAGGTTACTGCATAGAATGAGACTAGATTTTAAAAGTGAGTGGGTTTCATCACCAGGTCCTCTATaGCTCCCTCGTGCACATACT +
Preference number: 4 (lower is better)
Translates to: SQRLLHRMRLDFKSEWVSSPGPL*LPRAHT
Trigger: AGTATGTGCACGAGGGAGGCATAGAGGACCTGGTGA...TGAAACCCACTCACTTTTAAAATCTAGTCTCATTCTATGCAGTAACCTCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGACACCATGGTCCACTTTaGACACATAGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRHHGPL*THRCPG
Trigger: GCCTGGGCATCTATGTGTCCAAAGTGGACCATGGTG...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR GCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGACTTTGGACACATAGATaGCCAGGCCAAACTCCTTGC +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRLWTHR*PGQTPC
Trigger: GCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAAG...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CCA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGATCCACCCGGACTGAATaGATGATGTCACTTTCATCA +
Preference number: 4 (lower is better)
Translates to: HFNASCWNRYRSILMCLRSTRTE*MMSLSS
Trigger: TGATGAAAGTGACATCATCCATTCAGTCCGGGTGGA...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp GACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCTCTGCTGCAGCACCCCGTaGCTCAGTCGGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: DCGPHAAPGLHPASRIGLCCSTP*LSRSSQ
Trigger: CTGGCTGGACCGACTGAGCAACGGGGTGCTGCAGCA...GAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp GGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAAGCAGGAGGCCGGAGTGGCGCCGCCAGCCTaGTCAAACCACCCGCAGGCG +
Preference number: 5 (lower is better)
Translates to: GDAWVACPAGLVSKQEAGVAPPA*SNHPQA
Trigger: CGCCTGCGGGTGGTTTGACAAGGCTGGCGGCGCCAC...TCCGGCCTCCTGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp GACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCTCACCCCCTATCCTGGCTaGGGAGGTTGGGGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: DCGPHAAPGLHPASRIGLTPYPG*GGWGAV
Trigger: CACTGCTCCCCAACCTCCCAAGCCAGGATAGGGGGT...GAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS CCA 90 bp GCCTCCGCGGCTGTCAGGCACGGGGGTGATAAGGTGACGCTTGGGTaGCGTGTCCTGCCGGGCTGGTCTCAAAGCAGGAGGCCGGACTGC +
Preference number: 5 (lower is better)
Translates to: ASAAVRHGGDKVTLG*RVLPGWSQSRRPDC
Trigger: GCAGTCCGGCCTCCTGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGACAGCCGCGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp GACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCTCTTGCCCCCACGGATGTaGAAGCCCAGGCAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: DCGPHAAPGLHPASRIGLLPPRM*KPRQKS
Trigger: CGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCAA...GAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS GCA 90 bp CTCAGGTCTCCTAGGCCCAGTGGGTCGAAGCCCACTGCGAAACCCTaGGCCATGGCGGCTGGGCTAGGGCGGCACCCTACAGGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: LRSPRPSGSKPTAKP*AMAAGLGRHPTGPE
Trigger: TTCTGGACCTGTAGGGTGCCGCCCTAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCACTGGGCCTAGGAGACCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000644576.1
ENST00000644782.1
ENST00000645349.1
ENST00000646029.1
CDS-3UTR CAA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGAGGTTCATCAGCGTCTaGGAGCGCTGCAGGGCACCC +
Preference number: 5 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWRFISV*ERCRAP
Trigger: GGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACCT...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp GGCGCTGGAGGCGCACGAAGAGACGCTGGAGCTGCTCTCAGAGGCCGGGGACAGAGCAGCATCAAGGGGTaGGTGGGCAGGCAAGTGGTC +
Preference number: 5 (lower is better)
Translates to: GAGGARRDAGAALRGRGQSSIKG*VGRQVV
Trigger: GACCACTTGCCTGCCCACCAACCCCTTGATGCTGCT...CTGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS TCA 90 bp CGCTACCCATGGTGGTGCTCTCCAGGCTCAGCCCATTCACCTCCGTaGTCTTGTCCCCCACGCACAGGCCAGCCCGCTCTGCACTGCTGC +
Preference number: 5 (lower is better)
Translates to: RYPWWCSPGSAHSPP*SCPPRTGQPALHCC
Trigger: GCAGCAGTGCAGAGCGGGCTGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGCTGAGCCTGGAGAGCACCACCATGGGTAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000619208.6
ENST00000644782.1
ENST00000645349.1
CDS CCA 90 bp GCCCAGTGGGTCGAAGCCCACTGCGAAACCCTGCGCCATGGCGGCTaGGCTAGGGCGGCACCCTACAGGTCCAGAAGGAATCTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: AQWVEAHCETLRHGG*ARAAPYRSRRNLLA
Trigger: AGCTAGCAGATTCCTTCTGGACCTGTAGGGTGCCGCCCTAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCACTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000642474.1
ENST00000644576.1
ENST00000644782.1
ENST00000645349.1
ENST00000646029.1
CDS CCA 90 bp GGCCCACGCCCCCTGCTTTCTCTATGTCCAGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCAGTGTCCAGGCCTCTCTGCGCCCGT +
Preference number: 5 (lower is better)
Translates to: GPRPLLSLCPGEGKF*PGSRCPVSRPLCAR
Trigger: ACGGGCGCAGAGAGGCCTGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGCAGGGGGCGTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp GTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGCCCGTGAAGGCCCTCGCTaGCGATGCCTCTCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: VPSVPLSEGPCLAPTLAAREGPR*RCLSEV
Trigger: CACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCACG...GGCAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp GACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCTCAGAAGTCGTCGGAGGTaGTGTATAGGTGGACGATGC +
Preference number: 5 (lower is better)
Translates to: DCGPHAAPGLHPASRIGLRSRRR*CIGGRC
Trigger: GCATCGTCCACCTATACACAACCTCCGACGACTTCT...GAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp GGCGCTGGAGGCGCACGAAGAGACGCTGGAGCTGCTCTCAGAGGCCGGGGACAGAGCAGCAAAGCCGTCTaGGGAGACTCAGAGAGCGCA +
Preference number: 5 (lower is better)
Translates to: GAGGARRDAGAALRGRGQSSKAV*GDSESA
Trigger: TGCGCTCTCTGAGTCTCCCAAGACGGCTTTGCTGCT...CTGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp GTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGCCCCCTGCCGCCCTCCCTaGAAGAAGAGGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: VPSVPLSEGPCLAPTLAAPCRPP*KKRFIS
Trigger: GCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGG...GGCAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp GGGCGCTGGAGGCGCACGAAGAGACGCTGGAGCTGCTCTCAGAGGCCGGGGACACCCAAGCTCCAGACCTaGGCTTTCTCACCCCCTATC +
Preference number: 5 (lower is better)
Translates to: GRWRRTKRRWSCSQRPGTPKLQT*AFSPPI
Trigger: GATAGGGGGTGAGAAAGCCAAGGTCTGGAGCTTGGG...TGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS GCA 90 bp GCCTCTGTGCGGGGCTGGGGTCTCAGTAACGTGAAGGCCCTCGCTTaGGATGCCTCTCAGAAGTGTGAGCTCCAGGCCTGGTCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ASVRGWGLSNVKALA*DASQKCELQAWSLV
Trigger: CACCAGCGACCAGGCCTGGAGCTCACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCCAGCCCCGCACAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000644782.1
ENST00000645349.1
CDS-3UTR CAA 90 bp ACCAGGCACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTACCGGCCGGTCTCCTaGATGGTCAGCATGATGTGC +
Preference number: 5 (lower is better)
Translates to: TRHGGDKVTLGWRVLPGWYRPVS*MVSMMC
Trigger: GCACATCATGCTGACCATCAAGGAGACCGGCCGGTA...CCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS GCA 90 bp GCCTCTGTGCGGGGCTGGGGTCTCAGTAACGTGAAGGCCCTCGCTTaGGATGCCTCTCAGAAGTGTGAGCTCCAGGCCCTAGGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: ASVRGWGLSNVKALA*DASQKCELQALGQR
Trigger: TCTCTGGCCTAGGGCCTGGAGCTCACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCCAGCCCCGCACAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642474.1
ENST00000646029.1
CDS CCA 90 bp CGTTCAGCAGCCGTTGTTGCTTCCTTAGCAGGTATCGCGTTGCGGTaGAGCCTGAGTCGCTGCCTAGGTGGCCTCGGGAGGAGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RSAAVVASLAGIALR*SLSRCLGGLGRRGS
Trigger: GCTCCCTCTCCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCACCGCAACGCGATACCTGCTAAGGAAGCAACAACGGCTGCTGAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000644576.1
ENST00000644782.1
ENST00000645349.1
ENST00000646029.1
CDS-3UTR CAA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAGCTTCGATGGGGGAGTaGATGAGGATGACGCGTCCC +
Preference number: 5 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQASMGE*MRMTRP
Trigger: GGGACGCGTCATCCTCATCAACTCCCCCATCGAAGC...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR CAA 90 bp CCGTCCCCTCAGTTCCACTCTCCGAGGGCCCTTGCTTGGCCCCCACCTTGGCTGTGGTGTCGGAGGGTGTaGAACCGCACTTCTCCACTA +
Preference number: 5 (lower is better)
Translates to: PSPQFHSPRALAWPPPWLWCRRV*NRTSPL
Trigger: TAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCA...CAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGTGGAACTGAGGGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp GACTGTGGGCCGCACGCTGCACCAGGTCTCCACCCGGCCTCCCGCATCGGGCTCAAGGACTGCTTCATCTaGGACAGTGTCACTGTCTTC +
Preference number: 5 (lower is better)
Translates to: DCGPHAAPGLHPASRIGLKDCFI*DSVTVF
Trigger: GAAGACAGTGACACTGTCCAAGATGAAGCAGTCCTT...GAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp GGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAAGCAGGAGGCCGGAAGAAGTCGTCGGAGGTaGTGTATAGGTGGACGATGC +
Preference number: 5 (lower is better)
Translates to: GDAWVACPAGLVSKQEAGRSRRR*CIGGRC
Trigger: GCATCGTCCACCTATACACAACCTCCGACGACTTCT...TCCGGCCTCCTGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR CAA 90 bp TGCTGCTGGTCAGCACCTTTACGGCGCTACCCATGGTGGTGCTCTCCAGGCTCAAGGTTCATCAGCGTCTaGGAGCGCTGCAGGGCACCC +
Preference number: 5 (lower is better)
Translates to: CCWSAPLRRYPWWCSPGSRFISV*ERCRAP
Trigger: GGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACCT...TGAGCCTGGAGAGCACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp CTGAAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGTCCGAGGGCCCTTGCTaGGCCCCCACCTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LKKLVGEVLGITGCWSQWSEGPC*APTLAA
Trigger: GGCAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGA...CCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGACTCTCCGAGGGCCCTaGCTTGGCCCCCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: GRRGPGDNGMLESVGESETLRGP*LGPHLG
Trigger: GCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGT...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGGTGGCGCCGCCAGCCTaGTCAAACCACCCGCAGGCG +
Preference number: 5 (lower is better)
Translates to: GSSDLAASASRVVGIGQVVAPPA*SNHPQA
Trigger: CGCCTGCGGGTGGTTTGACAAGGCTGGCGGCGCCAC...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR CAA 90 bp CTTCTGAGCTGGTGTCGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGCTTCGATGGGGGAGTaGATGAGGATGACGCGTCCC +
Preference number: 5 (lower is better)
Translates to: LLSWCRRVLNRTSPLPGAASMGE*MRMTRP
Trigger: GGGACGCGTCATCCTCATCAACTCCCCCATCGAAGC...GGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp GCAGGAACTGGAGCAGCATCAAGGGGTTGGTGGGCAGGCAAGTGGTCAGCAGGATTCACCTCCGTGATCTaGTCCCCCACGCACAGGCCA +
Preference number: 5 (lower is better)
Translates to: AGTGAASRGWWAGKWSAGFTSVI*SPTHRP
Trigger: TGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAA...TCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp TGGTGGGAGGTTCTGGGAGCCAGTGGGCAGGAACTGGAGCAGCATCAAGGGGTTTTCTCCTTGGAGAACTaGATGCCCGGCACACGGCCC +
Preference number: 5 (lower is better)
Translates to: WWEVLGASGQELEQHQGVFSLEN*MPGTRP
Trigger: GGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAA...AACCCCTTGATGCTGCTCCAGTTCCTGCCCACTGGCTCCCAGAACCTCCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp CCCCAGCCGCTCCCTCAGCTCCCCATTATCTTCCTCTTCCGGGAAGCCGTTCACCACGTGGTCTTCTCCTaGGAGAACTTGATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: PQPLPQLPIIFLFREAVHHVVFS*ENLMPG
Trigger: GCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTG...GTGAACGGCTTCCCGGAAGAGGAAGATAATGGGGAGCTGAGGGAGCGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAATGGTGTCGGAGGGTGTaGAACCGCACTTCTCCACTA +
Preference number: 5 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQWCRRV*NRTSPL
Trigger: TAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCA...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000644782.1
CDS-3UTR CAA 90 bp CCCCAGCCGCTCCCTCAGCTCCCCATTATCTTCCTCTTCCGGGAAGCCGTTCACCAGCATGATGTGCGTTaGGCCCTTCAGCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: PQPLPQLPIIFLFREAVHQHDVR*ALQHLH
Trigger: GTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTG...GTGAACGGCTTCCCGGAAGAGGAAGATAATGGGGAGCTGAGGGAGCGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS TCA 90 bp ATGAGGGAGTTGCTGCTCACCACGTGGTCTTCTCCTTGGAGAACTTaGTGCCCGGCACACGGCCCATGCGCCGAACCATCATGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: MRELLLTTWSSPWRT*CPAHGPCAEPSCAG
Trigger: GCCTGCACATGATGGTTCGGCGCATGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGTGAGCAGCAACTCCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470414.1
CDS CCA 90 bp GTGAAACCCCCATCTCTTTCTCTATGTCCAGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCAGTGTCCAGGCCTCTCTGCGCCCGT +
Preference number: 5 (lower is better)
Translates to: VKPPSLSLCPGEGKF*PGSRCPVSRPLCAR
Trigger: ACGGGCGCAGAGAGGCCTGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGAGATGGGGGTTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS CCA 90 bp TCACAGCAGGAGCAGCGGCAATGTGGCAGCAGAACCACTGGGATCTaGGAGAGCAGAGCTATTGGAGGAGGGCAGGGGAAAGATGCAGCC +
Preference number: 5 (lower is better)
Translates to: SQQEQRQCGSRTTGI*ESRAIGGGQGKDAA
Trigger: GGCTGCATCTTTCCCCTGCCCTCCTCCAATAGCTCTGCTCTCCCAGATCCCAGTGGTTCTGCTGCCACATTGCCGCTGCTCCTGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470414.1
CDS-3UTR CAA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGACCTGGAGACTTGCCTaGACCCCGGCTGCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVTWRLA*TPAAAA
Trigger: AGCCGCAGCAGCCGGGGTCAAGGCAAGTCTCCAGGT...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS CCA 90 bp GCTCCAGGCCCTAGGCCAGAGAACTGCCCCGTCCAGGCACCATCTTaGACTCTCGCTGACTTTATACAAGGCAGGTGGGAACCTTTCACC +
Preference number: 5 (lower is better)
Translates to: APGPRPENCPVQAPS*TLADFIQGRWEPFT
Trigger: GGTGAAAGGTTCCCACCTGCCTTGTATAAAGTCAGCGAGAGTCCAAGATGGTGCCTGGACGGGGCAGTTCTCTGGCCTAGGGCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642474.1
ENST00000646029.1
CDS-3UTR CAA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGGTGGCGCCGCCAGCCTaGTCAAACCACCCGCAGGCG +
Preference number: 5 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGVAPPA*SNHPQA
Trigger: CGCCTGCGGGTGGTTTGACAAGGCTGGCGGCGCCAC...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp CGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCACATCCACTGCCTTCCTCCACTTaGCTGACGAAGATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RRVLNRTSPLPGADSPHPLPSST*LTKMPR
Trigger: CCTGGGCATCTTCGTCAGCAAAGTGGAGGAAGGCAG...TGGATGTGGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGTTGCCCCCACGGATGTaGAAGCCCAGGCAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: GRRGPGDNGMLESVGESELPPRM*KPRQKS
Trigger: CGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCAA...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp GCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCACCGGACTGCCCTGCTCTaGAGGGCCTCAAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: ALVDKSFPSGNHNVPGSHRTALL*RASKAS
Trigger: GGAGGCTTTTGAGGCCCTCAAGAGCAGGGCAGTCCG...GTGGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp CTCCAGAGCTGGGGACTCTTCCGTCTGTCCCTGACAGCAGCATCCCCTGCCATTAGAGTCCTGAAGAAGTaGGTAGGAGAGGTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: LQSWGLFRLSLTAASPAIRVLKK*VGEVLG
Trigger: CCCCAGGACCTCTCCTACCAACTTCTTCAGGACTCT...AATGGCAGGGGATGCTGCTGTCAGGGACAGACGGAAGAGTCCCCAGCTCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp CACGGGGGTGATAAGGTGACGCTTGGGTGGCGTGTCCTGCCGGGCTGGTCTCAAGAATGCTGCTTGGGGTaGAGGAATGGATGCATTGAC +
Preference number: 5 (lower is better)
Translates to: HGGDKVTLGWRVLPGWSQECCLG*RNGCID
Trigger: GTCAATGCATCCATTCCTCAACCCCAAGCAGCATTC...TTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS TCA 90 bp CCTCTCCTTATTTTGAGGTCAGGCCTTTGGATCCCCTGCGTTTCCTaGGCCAGCGAGCAGGAGGAACAGAAGCCTCTCCTGCCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: PLLILRSGLWIPCVS*ASEQEEQKPLLPVG
Trigger: ACCCACTGGCAGGAGAGGCTTCTGTTCCTCCTGCTCGCTGGCTCAGGAAACGCAGGGGATCCAAAGGCCTGACCTCAAAATAAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470414.1
CDS TCA 90 bp CCATCAATCAGGCCCTCCAGAGCTGGGGACTCTTCCGTCTGTCCCTaGCAGCAGCATCCCCTGCCATTCACTGAGATTGGAGTCACATCC +
Preference number: 5 (lower is better)
Translates to: PSIRPSRAGDSSVCP*QQHPLPFTEIGVTS
Trigger: GGATGTGACTCCAATCTCAGTGAATGGCAGGGGATGCTGCTGTCAGGGACAGACGGAAGAGTCCCCAGCTCTGGAGGGCCTGATTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS GCA 90 bp AGTCACATCCTAAGCGTGGACTTCAGCCTGGGGGTTCTGCTTACCTaGACTGCTGCCTTCCTCCACTTTGCTGACGAAGATGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: SHILSVDFSLGVLLT*TAAFLHFADEDAQA
Trigger: GGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAAGGCAGCAGTGCAGGTAAGCAGAACCCCCAGGCTGAAGTCCACGCTTAGGATGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS CCA 90 bp AGAGCAAAACTCCATCTTTCTCTATGTCCAGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCAGTGTCCAGGCCTCTCTGCGCCCGT +
Preference number: 5 (lower is better)
Translates to: RAKLHLSLCPGEGKF*PGSRCPVSRPLCAR
Trigger: ACGGGCGCAGAGAGGCCTGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGATGGAGTTTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645349.1
CDS-3UTR CAA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGGCTTCGATGGGGGAGTaGATGAGGATGACGCGTCCC +
Preference number: 5 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVASMGE*MRMTRP
Trigger: GGGACGCGTCATCCTCATCAACTCCCCCATCGAAGC...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTGCTGCAGCACCCCGTaGCTCAGTCGGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SSDLAASASRVVGIGQVWCCSTP*LSRSSQ
Trigger: CTGGCTGGACCGACTGAGCAACGGGGTGCTGCAGCA...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGAAGCAGCAAAGCCGTCTaGGGAGACTCAGAGAGCGCA +
Preference number: 5 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGSSKAV*GDSESA
Trigger: TGCGCTCTCTGAGTCTCCCAAGACGGCTTTGCTGCT...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGAGGTTCATCAGCGTCTaGGAGCGCTGCAGGGCACCC +
Preference number: 5 (lower is better)
Translates to: GSSDLAASASRVVGIGQVRFISV*ERCRAP
Trigger: GGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACCT...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp GGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGATGGAATCTCACTCTGTaGCCCAGGCGTGGTGGCGCG +
Preference number: 5 (lower is better)
Translates to: GTTMCLEATTAPSGERSRWNLTL*PRRGGA
Trigger: CGCGCCACCACGCCTGGGCAACAGAGTGAGATTCCA...TCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS TCA 90 bp GGACTCTTCCGTCTGTCCCTGACAGCAGCATCCCCTGCCATTCACTaGGATTGGAGTCACATCCTAAGCGTGGACTTCAGCCTGGGGGTT +
Preference number: 5 (lower is better)
Translates to: GLFRLSLTAASPAIH*DWSHILSVDFSLGV
Trigger: AACCCCCAGGCTGAAGTCCACGCTTAGGATGTGACTCCAATCTCAGTGAATGGCAGGGGATGCTGCTGTCAGGGACAGACGGAAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp TTCAGGGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAATTAGCAGGTATCGCGTaGCGGTGGAGCCTGAGTCGC +
Preference number: 5 (lower is better)
Translates to: FREPQCAWKPQLPLVGKELAGIA*RWSLSR
Trigger: GCGACTCAGGCTCCACCGCAACGCGATACCTGCTAA...TTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp ACAGGCTGCCCACTAGCACCTTGTCCTTGGACACTAAGGCAGAGCCTTAATGACTTCACCTCCGTGATCTaGTCCCCCACGCACAGGCCA +
Preference number: 5 (lower is better)
Translates to: TGCPLAPCPWTLRQSLNDFTSVI*SPTHRP
Trigger: TGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAA...GTCATTAAGGCTCTGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTTCTCCTTGGAGAACTaGATGCCCGGCACACGGCCC +
Preference number: 5 (lower is better)
Translates to: GSSDLAASASRVVGIGQVFSLEN*MPGTRP
Trigger: GGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAA...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp GGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGATCAAACCTGACACCGTaGGCTGCCAGGACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GTTMCLEATTAPSGERSRSNLTP*AARTWS
Trigger: GGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTTGA...TCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp GCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCTGGAAGCCACCAGCATGATGTGCGTTaGGCCCTTCAGCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: ALVDKSFPSGNHNVPGSHQHDVR*ALQHLH
Trigger: GTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTG...GTGGCTTCCAGGCACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGAGGTTCATCAGCGTCTaGGAGCGCTGCAGGGCACCC +
Preference number: 5 (lower is better)
Translates to: SSDLAASASRVVGIGQVWRFISV*ERCRAP
Trigger: GGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACCT...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCCCTGCCGCCCTCCCTaGAAGAAGAGGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: GSSDLAASASRVVGIGQVPCRPP*KKRFIS
Trigger: GCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp TTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCTCCGAGGGCCCTTGCTaGGCCCCCACCTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LFICVCDQAASPFTQVYGSEGPC*APTLAA
Trigger: GGCAGCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGA...GCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTCACAAACACAAATAAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp GGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAATCTGAGCTGCCCACTAGCACCTaGTCCTTGGACACTAAGGCA +
Preference number: 5 (lower is better)
Translates to: GRRGPGDNGMLESVGESELPTST*SLDTKA
Trigger: TGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAG...CTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGCGTGAAGGCCCTCGCTaGCGATGCCTCTCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: SSDLAASASRVVGIGQVWREGPR*RCLSEV
Trigger: CACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCACG...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTTAGCAGGTATCGCGTaGCGGTGGAGCCTGAGTCGC +
Preference number: 5 (lower is better)
Translates to: SSDLAASASRVVGIGQVWLAGIA*RWSLSR
Trigger: GCGACTCAGGCTCCACCGCAACGCGATACCTGCTAA...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTAGCTTCGATGGGGGAGTaGATGAGGATGACGCGTCCC +
Preference number: 5 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVASMGE*MRMTRP
Trigger: GGGACGCGTCATCCTCATCAACTCCCCCATCGAAGC...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTTCGATGGGGGAGTaGATGAGGATGACGCGTCCC +
Preference number: 5 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHASMGE*MRMTRP
Trigger: GGGACGCGTCATCCTCATCAACTCCCCCATCGAAGC...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCTGCCTTCCTCCACTTaGCTGACGAAGATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GSSDLAASASRVVGIGQVLPSST*LTKMPR
Trigger: CCTGGGCATCTTCGTCAGCAAAGTGGAGGAAGGCAG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTATTCACCTCCGTGATCTaGTCCCCCACGCACAGGCCA +
Preference number: 5 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVFTSVI*SPTHRP
Trigger: TGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAA...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp GAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAATTCACCTCCGTGATCTaGTCCCCCACGCACAGGCCA +
Preference number: 5 (lower is better)
Translates to: EPQCAWKPQLPLVGKEVEFTSVI*SPTHRP
Trigger: TGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAA...TTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACTTCACCTCCGTGATCTaGTCCCCCACGCACAGGCCA +
Preference number: 5 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHFTSVI*SPTHRP
Trigger: TGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAA...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp GAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAATTCTCCTTGGAGAACTaGATGCCCGGCACACGGCCC +
Preference number: 5 (lower is better)
Translates to: EPQCAWKPQLPLVGKEVEFSLEN*MPGTRP
Trigger: GGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAA...TTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTTGCCCCCACGGATGTaGAAGCCCAGGCAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: SSDLAASASRVVGIGQVWLPPRM*KPRQKS
Trigger: CGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCAA...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACTCAAACCTGACACCGTaGGCTGCCAGGACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHSNLTP*AARTWS
Trigger: GGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTTGA...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTCAAACCTGACACCGTaGGCTGCCAGGACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SSDLAASASRVVGIGQVWSNLTP*AARTWS
Trigger: GGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTTGA...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGCAGCATGATGTGCGTTaGGCCCTTCAGCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: GSSDLAASASRVVGIGQVQHDVR*ALQHLH
Trigger: GTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTG...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp ACCATGGGCTGCACCTTGGACTCAATGCCCCCAGAAATGCTGATACCTAAGGACTACCGGCCGGTCTCCTaGATGGTCAGCATGATGTGC +
Preference number: 5 (lower is better)
Translates to: TMGCTLDSMPPEMLIPKDYRPVS*MVSMMC
Trigger: GCACATCATGCTGACCATCAAGGAGACCGGCCGGTA...GTCCTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTGCTGCAGCACCCCGTaGCTCAGTCGGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: TKQPLPSPRFMASFSLVYCCSTP*LSRSSQ
Trigger: CTGGCTGGACCGACTGAGCAACGGGGTGCTGCAGCA...ATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp GGAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAAGCAGCAAAGCCGTCTaGGGAGACTCAGAGAGCGCA +
Preference number: 5 (lower is better)
Translates to: GTTMCLEATTAPSGERSRSSKAV*GDSESA
Trigger: TGCGCTCTCTGAGTCTCCCAAGACGGCTTTGCTGCT...TCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTCACCAGTCAAGGTCCTaGACCCTCCTACTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPHQSRS*TLLLGP
Trigger: AGGCCCCAGTAGGAGGGTCAAGGACCTTGACTGGTG...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGACCTGGAGACTTGCCTaGACCCCGGCTGCTGCGGCT +
Preference number: 5 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRTWRLA*TPAAAA
Trigger: AGCCGCAGCAGCCGGGGTCAAGGCAAGTCTCCAGGT...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTACTCTCCGAGGGCCCTaGCTTGGCCCCCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSTLRGP*LGPHLG
Trigger: GCCAAGGTGGGGGCCAAGCAAGGGCCCTCGGAGAGT...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp GCGACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGAACCATGGGCTGCACCTaGGACTCAATGCCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: ATHKGQHVRKCPPIPSSRTMGCT*DSMPPE
Trigger: TTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT...TCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp AAGAAGTTGGTAGGAGAGGTCCTGGGGATAACGGGATGCTGGAGTCAGTGGGTGAGAGTCCTGAAGAAGTaGGTAGGAGAGGTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: KKLVGEVLGITGCWSQWVRVLKK*VGEVLG
Trigger: CCCCAGGACCTCTCCTACCAACTTCTTCAGGACTCT...CACCCACTGACTCCAGCATCCCGTTATCCCCAGGACCTCTCCTACCAACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp CGGAGGGTGTTGAACCGCACTTCTCCACTACCAGGCGCCGATTCACCACATCCACTTTCATCCGTTTCCTaGCACAGAATGCTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: RRVLNRTSPLPGADSPHPLSSVS*HRMLLG
Trigger: CCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAG...TGGATGTGGTGAATCGGCGCCTGGTAGTGGAGAAGTGCGGTTCAACACCCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp GAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAACGTGGTGGCGCGATTTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: EPQCAWKPQLPLVGKEVERGGAI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAAATCGCGCCACCACG...TTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS CCA 90 bp GTCCAGGCACCATCTTGGACTCTCGCTGACTTTATACAAGGCAGGTaGGAACCTTTCACCCCTCATTCCTGCTCGGGGCTGAGTCATCTA +
Preference number: 5 (lower is better)
Translates to: VQAPSWTLADFIQGR*EPFTPHSCSGLSHL
Trigger: TAGATGACTCAGCCCCGAGCAGGAATGAGGGGTGAAAGGTTCCCACCTGCCTTGTATAAAGTCAGCGAGAGTCCAAGATGGTGCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642474.1
ENST00000646029.1
CDS-3UTR CAA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTAGCAGGTATCGCGTaGCGGTGGAGCCTGAGTCGC +
Preference number: 5 (lower is better)
Translates to: DQAASPFTQVYGLVFTCILAGIA*RWSLSR
Trigger: GCGACTCAGGCTCCACCGCAACGCGATACCTGCTAA...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTCTGCCTTCCTCCACTTaGCTGACGAAGATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPLPSST*LTKMPR
Trigger: CCTGGGCATCTTCGTCAGCAAAGTGGAGGAAGGCAG...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp GAACCACAATGTGCCTGGAAGCCACAACTGCCCCTAGTGGGGAAAGAAGTAGAACTGCCTTCCTCCACTTaGCTGACGAAGATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: EPQCAWKPQLPLVGKEVELPSST*LTKMPR
Trigger: CCTGGGCATCTTCGTCAGCAAAGTGGAGGAAGGCAG...TTCTACTTCTTTCCCCACTAGGGGCAGTTGTGGCTTCCAGGCACATTGTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTACACGTGGTCTTCTCCTaGGAGAACTTGATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVHVVFS*ENLMPG
Trigger: GCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTG...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTCACGTGGTCTTCTCCTaGGAGAACTTGATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPHVVFS*ENLMPG
Trigger: GCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTG...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACCACGTGGTCTTCTCCTaGGAGAACTTGATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHHVVFS*ENLMPG
Trigger: GCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTG...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTATACCGGCCGGTCTCCTaGATGGTCAGCATGATGTGC +
Preference number: 5 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVYRPVS*MVSMMC
Trigger: GCACATCATGCTGACCATCAAGGAGACCGGCCGGTA...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp TCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGAGCAGCAAAGCCGTCTaGGGAGACTCAGAGAGCGCA +
Preference number: 5 (lower is better)
Translates to: SSDLAASASRVVGIGQVWSSKAV*GDSESA
Trigger: TGCGCTCTCTGAGTCTCCCAAGACGGCTTTGCTGCT...CCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACAGCAGCAAAGCCGTCTaGGGAGACTCAGAGAGCGCA +
Preference number: 5 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHSSKAV*GDSESA
Trigger: TGCGCTCTCTGAGTCTCCCAAGACGGCTTTGCTGCT...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp ACTCATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTCCAGACCCCCTTCTCTaGGACACAAGACTGCACCAG +
Preference number: 5 (lower is better)
Translates to: THKGQHVRKCPPIPSSRPPDPLL*DTRLHQ
Trigger: CTGGTGCAGTCTTGTGTCCAAGAGAAGGGGGTCTGG...AGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGCGGACTGCCCTGCTCTaGAGGGCCTCAAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRRTALL*RASKAS
Trigger: GGAGGCTTTTGAGGCCCTCAAGAGCAGGGCAGTCCG...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp GGAATGGATGCATTGACCCCTTCAGGGCCCTGTCTGAGAGTCTGTGTCCCTGGAGAATGCTGCTTGGGGTaGAGGAATGGATGCATTGAC +
Preference number: 5 (lower is better)
Translates to: GMDALTPSGPCLRVCVPGECCLG*RNGCID
Trigger: GTCAATGCATCCATTCCTCAACCCCAAGCAGCATTC...TCCAGGGACACAGACTCTCAGACAGGGCCCTGAAGGGGTCAATGCATCCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGTTAGCAGGTATCGCGTaGCGGTGGAGCCTGAGTCGC +
Preference number: 5 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRLAGIA*RWSLSR
Trigger: GCGACTCAGGCTCCACCGCAACGCGATACCTGCTAA...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACGCTGTATGGTGTCGGAGGGTGTaGAACCGCACTTCTCCACTA +
Preference number: 5 (lower is better)
Translates to: CFSFQSSWDWPGVVDHAVWCRRV*NRTSPL
Trigger: TAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCA...TACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp GGCTCAAGTGATCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGAGAAGTCGTCGGAGGTaGTGTATAGGTGGACGATGC +
Preference number: 5 (lower is better)
Translates to: GSSDLAASASRVVGIGQVRSRRR*CIGGRC
Trigger: GCATCGTCCACCTATACACAACCTCCGACGACTTCT...CACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGTCAAACCTGACACCGTaGGCTGCCAGGACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRSNLTP*AARTWS
Trigger: GGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTTGA...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp CCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTTCAAACCTGACACCGTaGGCTGCCAGGACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PSSLSLHPGLWPRFHLYISNLTP*AARTWS
Trigger: GGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTTGA...AATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATACAGCATGATGTGCGTTaGGCCCTTCAGCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: DQAASPFTQVYGLVFTCIQHDVR*ALQHLH
Trigger: GTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTG...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATACCGGCCGGTCTCCTaGATGGTCAGCATGATGTGC +
Preference number: 5 (lower is better)
Translates to: DQAASPFTQVYGLVFTCIYRPVS*MVSMMC
Trigger: GCACATCATGCTGACCATCAAGGAGACCGGCCGGTA...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCAGGTTCATCAGCGTCTaGGAGCGCTGCAGGGCACCC +
Preference number: 5 (lower is better)
Translates to: RISGTRKAFHPFPCTECCRFISV*ERCRAP
Trigger: GGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACCT...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCGGACTGCCCTGCTCTaGAGGGCCTCAAAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: LFICVCDQAASPFTQVYGRTALL*RASKAS
Trigger: GGAGGCTTTTGAGGCCCTCAAGAGCAGGGCAGTCCG...GCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTCACAAACACAAATAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp GACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATAACCATGGGCTGCACCTaGGACTCAATGCCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: DQAASPFTQVYGLVFTCITMGCT*DSMPPE
Trigger: TTCTGGGGGCATTGAGTCCAAGGTGCAGCCCATGGT...TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp CCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTAGCAGCATCAAGGGGTaGGTGGGCAGGCAAGTGGTC +
Preference number: 5 (lower is better)
Translates to: PSSLSLHPGLWPRFHLYISSIKG*VGRQVV
Trigger: GACCACTTGCCTGCCCACCAACCCCTTGATGCTGCT...AATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCACCCCCTATCCTGGCTaGGGAGGTTGGGGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: RISGTRKAFHPFPCTECCTPYPG*GGWGAV
Trigger: CACTGCTCCCCAACCTCCCAAGCCAGGATAGGGGGT...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTCCCTGCCGCCCTCCCTaGAAGAAGAGGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSPCRPP*KKRFIS
Trigger: GCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGG...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCAGGGAACCACAATGTGCCCTGCCGCCCTCCCTaGAAGAAGAGGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: CDKMALVDKSFPSGNHNVPCRPP*KKRFIS
Trigger: GCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGG...CACATTGTGGTTCCCTGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp TCTTGCTGCTTCAGCTTCCAGAGTAGTTGGGATTGGCCAGGTGTGGTAGATCACTGGGCTCAAGTGATCTaGCTGCTTCAGCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SCCFSFQSSWDWPGVVDHWAQVI*LLQLPE
Trigger: CTCTGGAAGCTGAAGCAGCAAGATCACTTGAGCCCA...GTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370215.7
ENST00000645349.1
CDS-3UTR CAA 90 bp CATAAGGGACAGCATGTGAGAAAGTGCCCACCAATCCCAAGCTCCAGACCTTGGCCTCATAGAGCTCTCTaGGGGAGAAAAGGTGATGGA +
Preference number: 5 (lower is better)
Translates to: HKGQHVRKCPPIPSSRPWPHRAL*GRKGDG
Trigger: TCCATCACCTTTTCTCCCCAAGAGAGCTCTATGAGG...CCAAGGTCTGGAGCTTGGGATTGGTGGGCACTTTCTCACATGCTGTCCCTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp GTGGTGACCAGCAGATGTGATAAAATGGCTCTGGTGGACAAGAGCTTTCCTTCACGGGGTTTCGCCATGTaGGCCAGGTTGGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: VVTSRCDKMALVDKSFPSRGFAM*ARLVST
Trigger: AGTAGAGACCAACCTGGCCAACATGGCGAAACCCCG...TGAAGGAAAGCTCTTGTCCACCAGAGCCATTTTATCACATCTGCTGGTCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp TCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGAGAAGTCGTCGGAGGTaGTGTATAGGTGGACGATGC +
Preference number: 5 (lower is better)
Translates to: SGTRKAFHPFPCTECCLGRSRRR*CIGGRC
Trigger: GCATCGTCCACCTATACACAACCTCCGACGACTTCT...CCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCCCAAGCTCCAGACCTaGGCTTTCTCACCCCCTATC +
Preference number: 5 (lower is better)
Translates to: LFICVCDQAASPFTQVYGPKLQT*AFSPPI
Trigger: GATAGGGGGTGAGAAAGCCAAGGTCTGGAGCTTGGG...GCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTCACAAACACAAATAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTTGGTGTCGGAGGGTGTaGAACCGCACTTCTCCACTA +
Preference number: 5 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSWCRRV*NRTSPL
Trigger: TAGTGGAGAAGTGCGGTTCAACACCCTCCGACACCA...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTTGCTGCAGCACCCCGTaGCTCAGTCGGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFCCSTP*LSRSSQ
Trigger: CTGGCTGGACCGACTGAGCAACGGGGTGCTGCAGCA...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR CAA 90 bp AGGATTTCAGGGACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCCTGCCCACTAGCACCTaGTCCTTGGACACTAAGGCA +
Preference number: 5 (lower is better)
Translates to: RISGTRKAFHPFPCTECCLPTST*SLDTKA
Trigger: TGCCTTAGTGTCCAAGGACAAGGTGCTAGTGGGCAG...GCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGTCCCTGAAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGTGCACAGAATGCTGCTaGGGGTTGAGGAATGGATGC +
Preference number: 5 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRCTECC*GLRNGC
Trigger: GCATCCATTCCTCAACCCCAAGCAGCATTCTGTGCA...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTTGCACAGAATGCTGCTaGGGGTTGAGGAATGGATGC +
Preference number: 5 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSCTECC*GLRNGC
Trigger: GCATCCATTCCTCAACCCCAAGCAGCATTCTGTGCA...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp ACTAGAAAAGCCTTTCATCCGTTTCCTTGCACAGAATGCTGCTTGGGGTTGAGGCTTTCATCCGTTTCCTaGCACAGAATGCTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: TRKAFHPFPCTECCLGLRLSSVS*HRMLLG
Trigger: CCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAG...CCTCAACCCCAAGCAGCATTCTGTGCAAGGAAACGGATGAAAGGCTTTTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474125.7
ENST00000619208.6
CDS-3UTR CAA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTTTCTCCTTGGAGAACTaGATGCCCGGCACACGGCCC +
Preference number: 5 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFFSLEN*MPGTRP
Trigger: GGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAA...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR CAA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGATGCTGCAGCACCCCGTaGCTCAGTCGGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: HFNASCWNRYRSILMCLRCCSTP*LSRSSQ
Trigger: CTGGCTGGACCGACTGAGCAACGGGGTGCTGCAGCA...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp TTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCCTCATAGAGCTCTCTaGGGGAGAAAAGGTGATGGA +
Preference number: 5 (lower is better)
Translates to: LFICVCDQAASPFTQVYGPHRAL*GRKGDG
Trigger: TCCATCACCTTTTCTCCCCAAGAGAGCTCTATGAGG...GCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTCACAAACACAAATAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTCTGCCTTCCTCCACTTaGCTGACGAAGATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFLPSST*LTKMPR
Trigger: CCTGGGCATCTTCGTCAGCAAAGTGGAGGAAGGCAG...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR CAA 90 bp TCTCAGAGGTTACTGCATAGAATGAGACTAGATTTTAAAAGTGAGTGGGTTTCATTGCCCCCACGGATGTaGAAGCCCAGGCAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: SQRLLHRMRLDFKSEWVSLPPRM*KPRQKS
Trigger: CGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCAA...TGAAACCCACTCACTTTTAAAATCTAGTCTCATTCTATGCAGTAACCTCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTTACCGGCCGGTCTCCTaGATGGTCAGCATGATGTGC +
Preference number: 5 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFYRPVS*MVSMMC
Trigger: GCACATCATGCTGACCATCAAGGAGACCGGCCGGTA...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS-3UTR CAA 90 bp TTGGGGAGAAAAGGTGATGGAGGAAGGACAAATCCAGTAGAATGTCTGAGGTCTTGCCATTCACTGAGATaGGAGTCACATCCTAAGCGT +
Preference number: 5 (lower is better)
Translates to: LGRKGDGGRTNPVECLRSCHSLR*ESHPKR
Trigger: ACGCTTAGGATGTGACTCCAATCTCAGTGAATGGCA...AGACCTCAGACATTCTACTGGATTTGTCCTTCCTCCATCACCTTTTCTCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS-3UTR CAA 90 bp TTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCAAGGACTGCTTCATCTaGGACAGTGTCACTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LFICVCDQAASPFTQVYGKDCFI*DSVTVF
Trigger: GAAGACAGTGACACTGTCCAAGATGAAGCAGTCCTT...GCCATAAACCTGGGTGAAGGGAGAGGCTGCTTGGTCACAAACACAAATAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS-3UTR CAA 90 bp CATTTTAATGCTTCCTGCTGGAATCGTTACCGTTCTATTTTAATGTGTCTAAGACACGTGGTCTTCTCCTaGGAGAACTTGATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: HFNASCWNRYRSILMCLRHVVFS*ENLMPG
Trigger: GCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTG...TCTTAGACACATTAAAATAGAACGGTAACGATTCCAGCAGGAAGCATTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644782.1
CDS-3UTR CAA 90 bp TTTAGACCCAGCTTAAATCAGCAGCTGAGCCAAGACGTGCTTTATTTTTCTTTTAGAAGTCGTCGGAGGTaGTGTATAGGTGGACGATGC +
Preference number: 5 (lower is better)
Translates to: FRPSLNQQLSQDVLYFSFRSRRR*CIGGRC
Trigger: GCATCGTCCACCTATACACAACCTCCGACGACTTCT...AAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS CAA 72 bp GCCCTGGGGCTGGTCGCTGGTGTGGCGCCGCCAGCCTaGTCAAACCACCCGCAGGCGAGAGCTACTGCCGCA +
Preference number: 6 (lower is better)
Translates to: ALGLVAGVAPPA*SNHPQARATAA
Trigger: TGCGGCAGTAGCTCTCGCCTGCGGGTGGTTTGACAAGGCTGGCGGCGCCACACCAGCGACCAGCCCCAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646029.1
CDS CAA 72 bp TGCGCCCGGGGCTTTCTCTCTGGGCACCTAGACCGCTaGCTGCAGGGCTGGGGGTCTGCTGAGGCCCGCCAG +
Preference number: 6 (lower is better)
Translates to: CARGFLSGHLDR*LQGWGSAEARQ
Trigger: CTGGCGGGCCTCAGCAGACCCCCAGCCCTGCAGCAAGCGGTCTAGGTGCCCAGAGAGAAAGCCCCGGGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644576.1
CDS CAA 90 bp TTACTGCGGGCCCTGGGGCTGGTCGCTGGTGTGGCGCCGCCAGCCTaGTCAAACCACCCGCAGGCGAGAGCTACTGCCGCAGCCGGCAAA +
Preference number: 6 (lower is better)
Translates to: LLRALGLVAGVAPPA*SNHPQARATAAAGK
Trigger: TTTGCCGGCTGCGGCAGTAGCTCTCGCCTGCGGGTGGTTTGACAAGGCTGGCGGCGCCACACCAGCGACCAGCCCCAGGGCCCGCAGTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646029.1
CDS GCA 72 bp CCTAGGCCCAGTGGGTCGAAGCCCACTGCGAAACCCTaGGCCATGGCGGCTGGGCTAGGGCGGCACCCTACA +
Preference number: 6 (lower is better)
Translates to: PRPSGSKPTAKP*AMAAGLGRHPT
Trigger: TGTAGGGTGCCGCCCTAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCACTGGGCCTAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000644576.1
ENST00000644782.1
ENST00000645349.1
ENST00000646029.1
CDS TCA 72 bp AGATGCCCAGGCCATGCTCTGAGCCCCCGCGCACGCTaGAGCCCAGCCTCCCTGCTGGACTCTTCTCCACCC +
Preference number: 6 (lower is better)
Translates to: RCPGHALSPRAR*SPASLLDSSPP
Trigger: GGGTGGAGAAGAGTCCAGCAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000644782.1
ENST00000645349.1
CDS TCA 72 bp CCCGGCCCCTCTCCTGGTCACGTCTCAGTCTCCAGGTaGCAAACTTCTGTACCGGGCCCACGCCCCCTGCTT +
Preference number: 6 (lower is better)
Translates to: PGPSPGHVSVSR*QTSVPGPRPLL
Trigger: AAGCAGGGGGCGTGGGCCCGGTACAGAAGTTTGTCACCTGGAGACTGAGACGTGACCAGGAGAGGGGCCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS CCA 72 bp GTCGAAGCCCACTGCGAAACCCTGCGCCATGGCGGCTaGGCTAGGGCGGCACCCTACAGGTCCAGAAGGAAT +
Preference number: 6 (lower is better)
Translates to: VEAHCETLRHGG*ARAAPYRSRRN
Trigger: ATTCCTTCTGGACCTGTAGGGTGCCGCCCTAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGGCTTCGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000642474.1
ENST00000644576.1
ENST00000644782.1
ENST00000645349.1
ENST00000646029.1
CDS CCA 72 bp GCTGTCAGGCACGGGGGTGATAAGGTGACGCTTGGGTaGCGTGTCCTGCCGGGCTGGTCTCAAAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: AVRHGGDKVTLG*RVLPGWSQSRR
Trigger: CCTCCTGCTTTGAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGACAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS CAA 90 bp GGGGCCCGTTCAGCAGCCGTTGTTGCTTCCTTAGCAGGTATCGCGTaGCGGTGGAGCCTGAGTCGCTGCCTAGGTGGCCTCGGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: GARSAAVVASLAGIA*RWSLSRCLGGLGRR
Trigger: TCTCCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCACCGCAACGCGATACCTGCTAAGGAAGCAACAACGGCTGCTGAACGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000644576.1
ENST00000644782.1
ENST00000645349.1
CDS TCA 72 bp TGCCTCCCTCGTGCACATACCGGGAGCAGTGGCGGGTaGCAGCCAGCACCTCGTCATCAGTCAGCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: CLPRAHTGSSGG*QPAPRHQSAAS
Trigger: AGAGGCTGCTGACTGATGACGAGGTGCTGGCTGTCACCCGCCACTGCTCCCGGTATGTGCACGAGGGAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS TCA 72 bp GGAGGATCGCTTGAGCGTGGGAGGCGCAGGTCGCAGTaGGCTGAGATGGTGCCATTACACTCTCGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: GGSLERGRRRSQ*AEMVPLHSRLG
Trigger: GCCCAGGCGAGAGTGTAATGGCACCATCTCAGCTCACTGCGACCTGCGCCTCCCACGCTCAAGCGATCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645349.1
CDS GCA 72 bp CGGGGCTGGGGTCTCAGTAACGTGAAGGCCCTCGCTTaGGATGCCTCTCAGAAGTGTGAGCTCCAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: RGWGLSNVKALA*DASQKCELQAW
Trigger: CCAGGCCTGGAGCTCACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCCAGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000644782.1
ENST00000645349.1
CDS GCA 72 bp AAGGAATCTGCTAGCTCTGGAGAGGCCAGCCCTGCGTaGTTCGAGCTCCATGAGCCTCTGTGCGGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: KESASSGEASPA*FELHEPLCGAG
Trigger: CCCAGCCCCGCACAGAGGCTCATGGAGCTCGAAGCACGCAGGGCTGGCCTCTCCAGAGCTAGCAGATTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000642474.1
ENST00000644576.1
ENST00000644782.1
ENST00000645349.1
ENST00000646029.1
CDS GCA 72 bp CGGGGCTGGGGTCTCAGTAACGTGAAGGCCCTCGCTTaGGATGCCTCTCAGAAGTGTGAGCTCCAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: RGWGLSNVKALA*DASQKCELQAC
Trigger: GCAGGCCTGGAGCTCACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCCAGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644576.1
CDS CCA 72 bp GCCGTTGTTGCTTCCTTAGCAGGTATCGCGTTGCGGTaGAGCCTGAGTCGCTGCCTAGGTGGCCTCGGGAGG +
Preference number: 6 (lower is better)
Translates to: AVVASLAGIALR*SLSRCLGGLGR
Trigger: CCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCACCGCAACGCGATACCTGCTAAGGAAGCAACAACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000644576.1
ENST00000644782.1
ENST00000645349.1
ENST00000646029.1
CDS TCA 72 bp CATGAGCCTCTGTGCGGGGCTGGGGTCTCAGTAACGTaGAGGCCCTCGCTTGCGATGCCTCTCAGAAGTGTG +
Preference number: 6 (lower is better)
Translates to: HEPLCGAGVSVT*RPSLAMPLRSV
Trigger: CACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCCAGCCCCGCACAGAGGCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000642474.1
ENST00000644576.1
ENST00000644782.1
ENST00000645349.1
ENST00000646029.1
CDS CCA 72 bp CCCCTGCTTTCTCTATGTCCAGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCAGTGTCCAGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: PLLSLCPGEGKF*PGSRCPVSRPL
Trigger: GAGAGGCCTGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619208.6
CDS CAA 72 bp TCAGCAGCCGTTGTTGCTTCCTTAGCAGGTATCGCGTaGCGGTGGAGCCTGAGTCGCTGCCTAGGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: SAAVVASLAGIA*RWSLSRCLGGL
Trigger: GAGGCCACCTAGGCAGCGACTCAGGCTCCACCGCAACGCGATACCTGCTAAGGAAGCAACAACGGCTGCTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000644576.1
ENST00000644782.1
ENST00000645349.1
ENST00000646029.1
CDS CAA 72 bp GTTGCTGCTCACCACGTGGTCTTCTCCTTGGAGAACTaGATGCCCGGCACACGGCCCATGCGCCGAACCATC +
Preference number: 6 (lower is better)
Translates to: VAAHHVVFSLEN*MPGTRPMRRTI
Trigger: GATGGTTCGGCGCATGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGTGAGCAGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470414.1
CDS CAA 72 bp GATGAGGGAGTTGCTGCTCACCACGTGGTCTTCTCCTaGGAGAACTTGATGCCCGGCACACGGCCCATGCGC +
Preference number: 6 (lower is better)
Translates to: DEGVAAHHVVFS*ENLMPGTRPMR
Trigger: GCGCATGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGTGAGCAGCAACTCCCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470414.1
CDS CAA 90 bp GATGAGGGAGTTGCTGCTCACCACGTGGTCTTCTCCTTGGAGAACTaGATGCCCGGCACACGGCCCATGCGCCGAACCATCATGTGCAGG +
Preference number: 6 (lower is better)
Translates to: DEGVAAHHVVFSLEN*MPGTRPMRRTIMCR
Trigger: CCTGCACATGATGGTTCGGCGCATGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGTGAGCAGCAACTCCCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470414.1
CDS TCA 72 bp TTGCTGCTCACCACGTGGTCTTCTCCTTGGAGAACTTaGTGCCCGGCACACGGCCCATGCGCCGAACCATCA +
Preference number: 6 (lower is better)
Translates to: LLLTTWSSPWRT*CPAHGPCAEPS
Trigger: TGATGGTTCGGCGCATGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGTGAGCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470414.1
CDS CCA 72 bp CCATCTCTTTCTCTATGTCCAGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCAGTGTCCAGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: PSLSLCPGEGKF*PGSRCPVSRPL
Trigger: GAGAGGCCTGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370215.7
CDS CCA 72 bp CTCCATCTTTCTCTATGTCCAGGCGAGGGTAAGTTTTaGCCAGGCTCCCGCTGTCCAGTGTCCAGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: LHLSLCPGEGKF*PGSRCPVSRPL
Trigger: GAGAGGCCTGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645349.1
CDS TCA 72 bp ATTTTGAGGTCAGGCCTTTGGATCCCCTGCGTTTCCTaGGCCAGCGAGCAGGAGGAACAGAAGCCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: ILRSGLWIPCVS*ASEQEEQKPLL
Trigger: CAGGAGAGGCTTCTGTTCCTCCTGCTCGCTGGCTCAGGAAACGCAGGGGATCCAAAGGCCTGACCTCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470414.1
CDS TCA 72 bp GAACTGCCCCGTCCAGGCACCATCTTGGACTCTCGCTaGCTTTATACAAGGCAGGTGGGAACCTTTCACCCC +
Preference number: 6 (lower is better)
Translates to: ELPRPGTILDSR*LYTRQVGTFHP
Trigger: GGGGTGAAAGGTTCCCACCTGCCTTGTATAAAGTCAGCGAGAGTCCAAGATGGTGCCTGGACGGGGCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642474.1
ENST00000646029.1
CDS CCA 72 bp TTACAGCACCCCTGTAGAGAGGTGGTGTTTTGCCTCTaGGTTTCACAGCAGGAGCAGCGGCAATGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: LQHPCREVVFCL*VSQQEQRQCGS
Trigger: GCTGCCACATTGCCGCTGCTCCTGCTGTGAAACCCAGAGGCAAAACACCACCTCTCTACAGGGGTGCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470414.1
CDS CCA 72 bp CCTAGGCCAGAGAACTGCCCCGTCCAGGCACCATCTTaGACTCTCGCTGACTTTATACAAGGCAGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: PRPENCPVQAPS*TLADFIQGRWE
Trigger: TTCCCACCTGCCTTGTATAAAGTCAGCGAGAGTCCAAGATGGTGCCTGGACGGGGCAGTTCTCTGGCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642474.1
ENST00000646029.1
CDS GCA 72 bp CTAAGCGTGGACTTCAGCCTGGGGGTTCTGCTTACCTaGACTGCTGCCTTCCTCCACTTTGCTGACGAAGAT +
Preference number: 6 (lower is better)
Translates to: LSVDFSLGVLLT*TAAFLHFADED
Trigger: ATCTTCGTCAGCAAAGTGGAGGAAGGCAGCAGTGCAGGTAAGCAGAACCCCCAGGCTGAAGTCCACGCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474125.7
CDS CCA 72 bp CCATCTTGGACTCTCGCTGACTTTATACAAGGCAGGTaGGAACCTTTCACCCCTCATTCCTGCTCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: PSWTLADFIQGR*EPFTPHSCSGL
Trigger: CAGCCCCGAGCAGGAATGAGGGGTGAAAGGTTCCCACCTGCCTTGTATAAAGTCAGCGAGAGTCCAAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642474.1
ENST00000646029.1
CDS TCA 72 bp TCCCTGCTGGACTCTTCTCCACCCGGACTGAATGGATaGTGTCACTTTCATCACTGTTGGCTTCGATGGGGG +
Preference number: 6 (lower is better)
Translates to: SLLDSSPPGLNG*CHFHHCWLRWG
Trigger: CCCCCATCGAAGCCAACAGTGATGAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAGAGTCCAGCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000644782.1
ENST00000645349.1
CDS CAA 72 bp ATGTCACTTTCATCACTGTTGGCTTCGATGGGGGAGTaGATGAGGATGACGCGTCCCATGGGCGATGAGGCT +
Preference number: 6 (lower is better)
Translates to: MSLSSLLASMGE*MRMTRPMGDEA
Trigger: AGCCTCATCGCCCATGGGACGCGTCATCCTCATCAACTCCCCCATCGAAGCCAACAGTGATGAAAGTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000370215.7
ENST00000470414.1
ENST00000474125.7
ENST00000619208.6
ENST00000644782.1
ENST00000645349.1
CDS CAA 72 bp AAAGATGCAGCCTCTCCTTATTTTGAGGTCAGGCCTTaGGATCCCCTGCGTTTCCTGAGCCAGCGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: KDAASPYFEVRP*DPLRFLSQRAG
Trigger: TCCTGCTCGCTGGCTCAGGAAACGCAGGGGATCCAAAGGCCTGACCTCAAAATAAGGAGAGGCTGCATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470414.1