RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDZD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000067840

Ensembl transcript IDs: ENST00000164640.8, ENST00000393758.6, ENST00000393758.7, ENST00000468491.1, ENST00000475140.5, ENST00000480418.5, ENST00000480650.3, ENST00000483693.5, ENST00000484792.5, ENST00000544474.5

Found 429 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCTCCTTCCCAGTCAGCCCACCGCCTCTCACTGGGGTCCAGGTTaGGGATCGCCACCAAGTCCTCCCCAGGCCGCATGGCCCGAGGTC +
Preference number: 1 (lower is better)
Translates to: PLLPSQPTASHWGPG*GSPPSPPQAAWPEV
Trigger: GACCTCGGGCCATGCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGTGGGCTGACTGGGAAGGAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR CCA 90 bp GGAGGTTGGGGGCCTCTCCTTCCCAGTCAGCCCACCGCCTCTCACTaGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCA +
Preference number: 1 (lower is better)
Translates to: GGWGPLLPSQPTASH*GPGCGSPPSPPQAA
Trigger: TGCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGTGGGCTGACTGGGAAGGAGAGGCCCCCAACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR GCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTaGTCCTTTCAGCTCAGCTTCCCTGTCTGCAAGTACACGGGTCGG +
Preference number: 1 (lower is better)
Translates to: GGERPRSAAKPDTLL*SFQLSFPVCKYTGR
Trigger: CCGACCCGTGTACTTGCAGACAGGGAAGCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR GCA 90 bp AGCGTCCCTTCTCCTCAGGGGCTTCTCTCTGCTAACAAAGCCCTGTaGGCACACCCAGACGAGGAGATGTGTGCGTGCGCACAGCGAGCA +
Preference number: 1 (lower is better)
Translates to: SVPSPQGLLSANKAL*AHPDEEMCACAQRA
Trigger: TGCTCGCTGTGCGCACGCACACATCTCCTCGTCTGGGTGTGCGCACAGGGCTTTGTTAGCAGAGAGAAGCCCCTGAGGAGAAGGGACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR GCA 90 bp GCACACGCACAGCTGAAGGGGTGCCCATCACAGGTGTGCCCCCAGTaGTGGCCACTGGCATGGTCACTTTACTTGGGCAGAAGGAAGAAA +
Preference number: 1 (lower is better)
Translates to: AHAQLKGCPSQVCPQ*WPLAWSLYLGRRKK
Trigger: TTTCTTCCTTCTGCCCAAGTAAAGTGACCATGCCAGTGGCCAGCACTGGGGGCACACCTGTGATGGGCACCCCTTCAGCTGTGCGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR CCA 90 bp AAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATaGTGTGGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACC +
Preference number: 1 (lower is better)
Translates to: KHLPQFTQKRSPCSR*CGAQNGLCDFLVDT
Trigger: GGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR GCA 90 bp TTTATACAGCTCCACCTCCTCATACTCCAGCTCATCCAAGCGGTCTaGCTCCTGCGGGCCGCCCTCCATAAACTCCGCCGGGTCATAATA +
Preference number: 1 (lower is better)
Translates to: FIQLHLLILQLIQAV*LLRAALHKLRRVII
Trigger: TATTATGACCCGGCGGAGTTTATGGAGGGCGGCCCGCAGGAGGCAGACCGCTTGGATGAGCTGGAGTATGAGGAGGTGGAGCTGTATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
3UTR GCA 90 bp TCACCATCTAAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCTaGTCCAGATGGTGTGGGGCGCAGAACGGGCTCTGTGACTTCTTG +
Preference number: 1 (lower is better)
Translates to: SPSKHLPQFTQKRSP*SRWCGAQNGLCDFL
Trigger: CAAGAAGTCACAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTTAGATGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCCCCCAGGGGGTTCCCTaGGCCTGGGCCGTGTACCCG +
Preference number: 2 (lower is better)
Translates to: TASHWGPGCGSPPSPPQAPQGVP*AWAVYP
Trigger: CGGGTACACGGCCCAGGCCCAGGGAACCCCCTGGGG...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCCAGGTGTGCCCCCAGTaGTGGCCACTGGCATGGTCA +
Preference number: 2 (lower is better)
Translates to: RLSLGSRLRIATKSSPGRQVCPQ*WPLAWS
Trigger: TGACCATGCCAGTGGCCAGCACTGGGGGCACACCTG...GCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCTGCCCATCACAGGTGTaGCCCCAGTGCTGGCCACTG +
Preference number: 2 (lower is better)
Translates to: RLSLGSRLRIATKSSPGRCPSQV*PQCWPL
Trigger: CAGTGGCCAGCACTGGGGGCACACCTGTGATGGGCA...GCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCCCAGGGGGTTCCCTaGGCCTGGGCCGTGTACCCG +
Preference number: 2 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQPQGVP*AWAVYP
Trigger: CGGGTACACGGCCCAGGCCCAGGGAACCCCCTGGGG...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCCCCAGGGGGTTCCCTaGGCCTGGGCCGTGTACCCG +
Preference number: 2 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSPQGVP*AWAVYP
Trigger: CGGGTACACGGCCCAGGCCCAGGGAACCCCCTGGGG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGAGGAGATGTGTGCGTaGGCACAGCGAGCACGCGCG +
Preference number: 2 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSEEMCA*AQRARA
Trigger: CGCGCGTGCTCGCTGTGCGCACGCACACATCTCCTC...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCAGACGAGGAGATGTGTaGGTGCGCACAGCGAGCACG +
Preference number: 2 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLRRGDV*VRTAST
Trigger: CGTGCTCGCTGTGCGCACGCACACATCTCCTCGTCT...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGAGGAGATGTGTGCGTaGGCACAGCGAGCACGCGCG +
Preference number: 2 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSEEMCA*AQRARA
Trigger: CGCGCGTGCTCGCTGTGCGCACGCACACATCTCCTC...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCCTCAGCTTCCCTGTCTaGAAGTACACGGGTCGGGTG +
Preference number: 2 (lower is better)
Translates to: RLSLGSRLRIATKSSPGRLSFPV*KYTGRV
Trigger: CACCCGACCCGTGTACTTGCAGACAGGGAAGCTGAG...GCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR CAA 90 bp GCACCCCACAGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTaGGGGGCCTCTCCTTCCCAGTCAGCCCACCGCCTCTCACTGGGG +
Preference number: 2 (lower is better)
Translates to: APHRQPSSHVQILRR*GASPSQSAHRLSLG
Trigger: CCCCAGTGAGAGGCGGTGGGCTGACTGGGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCTGTGGGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR CAA 90 bp AGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTaGTGCTCCTTTCAGCTCAGCTTCCCTGTCTGCAAGTACACGGGT +
Preference number: 2 (lower is better)
Translates to: SGGERPRSAAKPDTL*CSFQLSFPVCKYTG
Trigger: ACCCGTGTACTTGCAGACAGGGAAGCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR CAA 90 bp CCCTGCTCCAGATGGTGTGGGGCGCAGAACGGGCTCTGTGACTTCTaGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTC +
Preference number: 2 (lower is better)
Translates to: PCSRWCGAQNGLCDF*VDTLQDPSVPAVLL
Trigger: GAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCAGGTGTGCCCCCAGTaGTGGCCACTGGCATGGTCA +
Preference number: 2 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSQVCPQ*WPLAWS
Trigger: TGACCATGCCAGTGGCCAGCACTGGGGGCACACCTG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCTCTGTGACTTCTTGGTaGACACCCTGCAGGACCCCT +
Preference number: 2 (lower is better)
Translates to: TASHWGPGCGSPPSPPQASVTSW*TPCRTP
Trigger: AGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGAGCCCCTGCTCCAGATaGTGTGGGGCGCAGAACGGG +
Preference number: 2 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKSPCSR*CGAQNG
Trigger: CCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCT...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCAGACGAGGAGATGTGTaGGTGCGCACAGCGAGCACG +
Preference number: 2 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPRRGDV*VRTAST
Trigger: CGTGCTCGCTGTGCGCACGCACACATCTCCTCGTCT...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTAACAAAGCCCTGTaGGCACACCCAGACGAGGAG +
Preference number: 2 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSANKAL*AHPDEE
Trigger: CTCCTCGTCTGGGTGTGCGCACAGGGCTTTGTTAGC...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTGTGTGTGCGTGCACGTaGAAGCACACGCAAGAGCAT +
Preference number: 2 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFVCACT*KHTQEH
Trigger: ATGCTCTTGCGTGTGCTTGCACGTGCACGCACACAC...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAAGTACACGGGTCGGGTaGAGAGAGCACTGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSSTRVG*REHWVC
Trigger: ACACACCCAGTGCTCTCTCCACCCGACCCGTGTACT...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCCTTCCCAGCCATCAGTaGAGAGGGGAGTTCCACTTC +
Preference number: 2 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSLPSHQ*RGEFHF
Trigger: GAAGTGGAACTCCCCTCTCCACTGATGGCTGGGAAG...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCGCTAACAAAGCCCTGTaGGCACACCCAGACGAGGAG +
Preference number: 2 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPANKAL*AHPDEE
Trigger: CTCCTCGTCTGGGTGTGCGCACAGGGCTTTGTTAGC...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCCAGGTGTGCCCCCAGTaGTGGCCACTGGCATGGTCA +
Preference number: 2 (lower is better)
Translates to: PEVFHCCSWGLVSRALTIQVCPQ*WPLAWS
Trigger: TGACCATGCCAGTGGCCAGCACTGGGGGCACACCTG...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTGCCCATCACAGGTGTaGCCCCAGTGCTGGCCACTG +
Preference number: 2 (lower is better)
Translates to: PEVFHCCSWGLVSRALTICPSQV*PQCWPL
Trigger: CAGTGGCCAGCACTGGGGGCACACCTGTGATGGGCA...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGTGTGTGCGTGCACGTaGAAGCACACGCAAGAGCAT +
Preference number: 2 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSVCACT*KHTQEH
Trigger: ATGCTCTTGCGTGTGCTTGCACGTGCACGCACACAC...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCCTCAGCTTCCCTGTCTaGAAGTACACGGGTCGGGTG +
Preference number: 2 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPLSFPV*KYTGRV
Trigger: CACCCGACCCGTGTACTTGCAGACAGGGAAGCTGAG...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGCACTGGGGTCCAGGTTaGGGATCGCCACCAAGTCCT +
Preference number: 2 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKHWGPG*GSPPSP
Trigger: AGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTG...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCTGCTGGCCACTGGCATaGTCACTTTACTTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSCWPLA*SLYLGR
Trigger: TCTGCCCAAGTAAAGTGACCATGCCAGTGGCCAGCA...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGAGTACACGGGTCGGGTaGAGAGAGCACTGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQSTRVG*REHWVC
Trigger: ACACACCCAGTGCTCTCTCCACCCGACCCGTGTACT...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCAGTACACGGGTCGGGTaGAGAGAGCACTGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPSTRVG*REHWVC
Trigger: ACACACCCAGTGCTCTCTCCACCCGACCCGTGTACT...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCAGACGAGGAGATGTGTaGGTGCGCACAGCGAGCACG +
Preference number: 2 (lower is better)
Translates to: RQPSSHVQILRRLGASPSRRGDV*VRTAST
Trigger: CGTGCTCGCTGTGCGCACGCACACATCTCCTCGTCT...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGGTGTGTGCGTGCACGTaGAAGCACACGCAAGAGCAT +
Preference number: 2 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQVCACT*KHTQEH
Trigger: ATGCTCTTGCGTGTGCTTGCACGTGCACGCACACAC...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGCTCAGCTTCCCTGTCTaGAAGTACACGGGTCGGGTG +
Preference number: 2 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKLSFPV*KYTGRV
Trigger: CACCCGACCCGTGTACTTGCAGACAGGGAAGCTGAG...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCGTGTGCCCCCAGTGCTaGCCACTGGCATGGTCACTT +
Preference number: 2 (lower is better)
Translates to: RQPSSHVQILRRLGASPSVCPQC*PLAWSL
Trigger: AAGTGACCATGCCAGTGGCCAGCACTGGGGGCACAC...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCGTGTGCCCCCAGTGCTaGCCACTGGCATGGTCACTT +
Preference number: 2 (lower is better)
Translates to: PEVFHCCSWGLVSRALTIVCPQC*PLAWSL
Trigger: AAGTGACCATGCCAGTGGCCAGCACTGGGGGCACAC...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCGCTAACAAAGCCCTGTaGGCACACCCAGACGAGGAG +
Preference number: 2 (lower is better)
Translates to: RQPSSHVQILRRLGASPSANKAL*AHPDEE
Trigger: CTCCTCGTCTGGGTGTGCGCACAGGGCTTTGTTAGC...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCGGACCCCTCCGTTCCTaGAGTCTTGCTCTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: RQPSSHVQILRRLGASPSGPLRS*SLALSE
Trigger: CTCAGAGAGAGCAAGACTGCAGGAACGGAGGGGTCC...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGGGACCCCTCCGTTCCTaGAGTCTTGCTCTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERGPLRS*SLALSE
Trigger: CTCAGAGAGAGCAAGACTGCAGGAACGGAGGGGTCC...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCCATGGTCACTTTACTTaGGCAGAAGGAAGAAAAGCG +
Preference number: 2 (lower is better)
Translates to: TASHWGPGCGSPPSPPQAHGHFT*AEGRKA
Trigger: CGCTTTTCTTCCTTCTGCCCAAGTAAAGTGACCATG...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGTGCTGGCCACTGGCATaGTCACTTTACTTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQCWPLA*SLYLGR
Trigger: TCTGCCCAAGTAAAGTGACCATGCCAGTGGCCAGCA...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCTGCTGGCCACTGGCATaGTCACTTTACTTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSCWPLA*SLYLGR
Trigger: TCTGCCCAAGTAAAGTGACCATGCCAGTGGCCAGCA...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCAGCCCCTGCTCCAGATaGTGTGGGGCGCAGAACGGG +
Preference number: 2 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFSPCSR*CGAQNG
Trigger: CCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCT...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR TCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGCAGTCTTGCTCTCTCTaGGTCACTGGGGAAACAGGT +
Preference number: 2 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKQSCSL*VTGETG
Trigger: ACCTGTTTCCCCAGTGACTCAGAGAGAGCAAGACTG...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCTGCCCATCACAGGTGTaGCCCCAGTGCTGGCCACTG +
Preference number: 2 (lower is better)
Translates to: LEPSPSKHLPQFTQKRSPCPSQV*PQCWPL
Trigger: CAGTGGCCAGCACTGGGGGCACACCTGTGATGGGCA...GGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGCCGGACACTCTCTTGTaGTCCTTTCAGCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKPDTLL*SFQLSF
Trigger: GAAGCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGG...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGTTGTCTACAAATAACTaGAGTGCGCAGCGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKLSTNN*SAQRRG
Trigger: TCCCCGCCGCTGCGCACTGCAGTTATTTGTAGACAA...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCCCACTTCTGCCAGGCTaGCTGAAGGAGCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: LEPSPSKHLPQFTQKRSPPLLPG*LKELPA
Trigger: GGCTGGCAGCTCCTTCAGGCAGCCTGGCAGAAGTGG...GGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCCCACTTCTGCCAGGCTaGCTGAAGGAGCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFPLLPG*LKELPA
Trigger: GGCTGGCAGCTCCTTCAGGCAGCCTGGCAGAAGTGG...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp TCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCCTTCCCAGCCATCAGTaGAGAGGGGAGTTCCACTTC +
Preference number: 2 (lower is better)
Translates to: SVTSWWTPCRTPPFLQSCLPSHQ*RGEFHF
Trigger: GAAGTGGAACTCCCCTCTCCACTGATGGCTGGGAAG...GCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGTCCCACACCTCAGAGTaGAAGCCACCAGAACAGCTG +
Preference number: 2 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERSHTSE*KPPEQL
Trigger: CAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGA...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCCTGCTCCAGATGGTGTaGGGCGCAGAACGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFLLQMV*GAERAL
Trigger: CAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAG...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR TCA 90 bp CGGGCCGCCCTCCATAAACTCCGCCGGGTCATAATACTCATGGCTGATTGGGGGGAGCAGGTAGAGGAATaGGACAGACAAGGGATGCAA +
Preference number: 2 (lower is better)
Translates to: RAALHKLRRVIILMADWGEQVEE*DRQGMQ
Trigger: TTGCATCCCTTGTCTGTCTCATTCCTCTACCTGCTC...CCCCCAATCAGCCATGAGTATTATGACCCGGCGGAGTTTATGGAGGGCGGCCCG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000480650.3
3UTR-3UTR GCA 90 bp CTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCCGGACACTCTCTTGTaGTCCTTTCAGCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: LCDFLVDTLQDPSVPAVLPDTLL*SFQLSF
Trigger: GAAGCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGG...CAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCTTGTCTACAAATAACTaGAGTGCGCAGCGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: RQPSSHVQILRRLGASPSLSTNN*SAQRRG
Trigger: TCCCCGCCGCTGCGCACTGCAGTTATTTGTAGACAA...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCTCTTGGTGGACACCCTaGAGGACCCCTCCGTTCCTG +
Preference number: 2 (lower is better)
Translates to: LEPSPSKHLPQFTQKRSPSWWTP*RTPPFL
Trigger: CAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGA...GGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCGTGTGCCCCCAGTGCTaGCCACTGGCATGGTCACTT +
Preference number: 2 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFVCPQC*PLAWSL
Trigger: AAGTGACCATGCCAGTGGCCAGCACTGGGGGCACAC...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCATGGTCACTTTACTTaGGCAGAAGGAAGAAAAGCG +
Preference number: 2 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSHGHFT*AEGRKA
Trigger: CGCTTTTCTTCCTTCTGCCCAAGTAAAGTGACCATG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp GCTGTTGGGATTTACCTCTCCGACATAAATGCCCAGGTCCTCCTCGTCGTCCGTATGAGCCACCAGGCCTaGATGAAAGGCCCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: AVGIYLSDINAQVLLVVRMSHQA*MKGPSS
Trigger: GGAAGAAGGGCCTTTCATCCAGGCCTGGTGGCTCAT...ACGGACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGGTAAATCCCAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
3UTR-3UTR GCA 90 bp GCTGTTGGGATTTACCTCTCCGACATAAATGCCCAGGTCCTCCTCGTCGTCCGTGCTTGTCCCGGTGGCTaGTTTTATACAGCTCCACCT +
Preference number: 2 (lower is better)
Translates to: AVGIYLSDINAQVLLVVRACPGG*FYTAPP
Trigger: AGGTGGAGCTGTATAAAAGCAGCCACCGGGACAAGC...ACGGACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGGTAAATCCCAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480650.3
3UTR-3UTR CCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCTCTGTGACTTCTTGGTaGACACCCTGCAGGACCCCT +
Preference number: 2 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFSVTSW*TPCRTP
Trigger: AGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp CTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCCCGGACACTCTCTTGTaGTCCTTTCAGCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: LEPSPSKHLPQFTQKRSPPDTLL*SFQLSF
Trigger: GAAGCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGG...GGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CCA 90 bp CAATGCTGTTGGGATTTACCTCTCCGACATAAATGCCCAGGTCCTCCTCGTCGTCCCAGCTTGTCCCGGTaGCTGCTTTTATACAGCTCC +
Preference number: 2 (lower is better)
Translates to: QCCWDLPLRHKCPGPPRRPSLSR*LLLYSS
Trigger: GGAGCTGTATAAAAGCAGCCACCGGGACAAGCTGGG...ACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGGTAAATCCCAACAGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480650.3
3UTR-3UTR GCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGCACAAAAATCAGGGGTaGCTTTGTCTACAAATAACT +
Preference number: 2 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKHKNQG*LCLQIT
Trigger: AGTTATTTGTAGACAAAGGCACCCCTGATTTTTGTG...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR GCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCCACAAAAATCAGGGGTaGCTTTGTCTACAAATAACT +
Preference number: 2 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFHKNQG*LCLQIT
Trigger: AGTTATTTGTAGACAAAGGCACCCCTGATTTTTGTG...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR GCA 72 bp CAAAGCCCTGTGCGCACACCCAGACGAGGAGATGTGTaGGTGCGCACAGCGAGCACGCGCGCGCGCACACAC +
Preference number: 3 (lower is better)
Translates to: QSPVRTPRRGDV*VRTASTRARTH
Trigger: GTGTGTGCGCGCGCGCGTGCTCGCTGTGCGCACGCACACATCTCCTCGTCTGGGTGTGCGCACAGGGCTTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR CCA 72 bp GGGCCTCTCCTTCCCAGTCAGCCCACCGCCTCTCACTaGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: GPLLPSQPTASH*GPGCGSPPSPP
Trigger: GGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGTGGGCTGACTGGGAAGGAGAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR CCA 72 bp GGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCATaGCCCGAGGTCTTCCACTGCTGCTCATGGGGCTTG +
Preference number: 3 (lower is better)
Translates to: GCGSPPSPPQAA*PEVFHCCSWGL
Trigger: CAAGCCCCATGAGCAGCAGTGGAAGACCTCGGGCCATGCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR GCA 72 bp CAGCTGAAGGGGTGCCCATCACAGGTGTGCCCCCAGTaGTGGCCACTGGCATGGTCACTTTACTTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: QLKGCPSQVCPQ*WPLAWSLYLGR
Trigger: TCTGCCCAAGTAAAGTGACCATGCCAGTGGCCAGCACTGGGGGCACACCTGTGATGGGCACCCCTTCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR GCA 72 bp CGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTaGAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: RRTGSVTSWWTP*RTPPFLQSCSL
Trigger: GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR CCA 72 bp CTGAAGGGGTGCCCATCACAGGTGTGCCCCCAGTGCTaGCCACTGGCATGGTCACTTTACTTGGGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: LKGCPSQVCPQC*PLAWSLYLGRR
Trigger: CCTTCTGCCCAAGTAAAGTGACCATGCCAGTGGCCAGCACTGGGGGCACACCTGTGATGGGCACCCCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CAA 90 bp CGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCAAATCAGGGGTGCCTTaGTCTACAAATAACTGCAGT +
Preference number: 3 (lower is better)
Translates to: RLSLGSRLRIATKSSPGRKSGVP*STNNCS
Trigger: ACTGCAGTTATTTGTAGACAAAGGCACCCCTGATTT...GCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR-3UTR CAA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTCCGTTCCTGCAGTCTaGCTCTCTCTGAGTCACTGG +
Preference number: 3 (lower is better)
Translates to: PEVFHCCSWGLVSRALTISVPAV*LSLSHW
Trigger: CCAGTGACTCAGAGAGAGCAAGACTGCAGGAACGGA...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR GCA 72 bp CTGCAATGCTGTTGGGATTTACCTCTCCGACATAAATaGCCAGGTCCTCCTCGTCGTCCGTGCGGTAGCAAA +
Preference number: 3 (lower is better)
Translates to: LQCCWDLPLRHK*PGPPRRPCGSK
Trigger: TTTGCTACCGCACGGACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGGTAAATCCCAACAGCATTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR GCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCGCTCCTCCGCGTGCTaGCTCCGGCCGGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLRSSAC*LRPASG
Trigger: TCCTGAGGCCGGCCGGAGGCAGCACGCGGAGGAGCG...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCCCCAGGGGGTTCCCTaGGCCTGGGCCGTGTACCCG +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLPQGVP*AWAVYP
Trigger: CGGGTACACGGCCCAGGCCCAGGGAACCCCCTGGGG...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCGCTGTTGCTCAGGCCTaGGCCGGCATCGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLAVAQA*AGIGSP
Trigger: GGGGCTCCCGATGCCGGCCCAGGCCTGAGCAACAGC...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCCTGCCTTGGCGGGGGTaGCAACAGCGGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: TASHWGPGCGSPPSPPQALPWRG*QQRGRE
Trigger: CTCCCGGCCCCGCTGTTGCCACCCCCGCCAAGGCAG...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCGCGGAGCGCGCGCCGTaGGCCAGCATCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLAERAP*ASISWM
Trigger: CATCCAGGAGATGCTGGCCCACGGCGCGCGCTCCGC...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCCGTCCAGGGCGCTGTTaGCTCCGGAGGCCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: TASHWGPGCGSPPSPPQARPGRC*LRRPGE
Trigger: TTCCCCGGGCCTCCGGAGGCAACAGCGCCCTGGACG...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGGGTCAACCCCGTCTTaGGGTTGCGGCGGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: TASHWGPGCGSPPSPPQAGSTPS*GCGGRA
Trigger: AGCGCGGCCGCCGCAACCCCAAGACGGGGTTGACCC...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTCGCACGGGCCGCTTaGCCACGTAGCGGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLLARAA*PRSGFR
Trigger: ACGGAACCCGCTACGTGGCCAAGCGGCCCGTGCGAG...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCCCCAGGGGGTTCCCTaGGCCTGGGCCGTGTACCCG +
Preference number: 4 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFPQGVP*AWAVYP
Trigger: CGGGTACACGGCCCAGGCCCAGGGAACCCCCTGGGG...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCCTCGCACGGGCCGCTTaGCCACGTAGCGGGTTCCGT +
Preference number: 4 (lower is better)
Translates to: TASHWGPGCGSPPSPPQALARAA*PRSGFR
Trigger: ACGGAACCCGCTACGTGGCCAAGCGGCCCGTGCGAG...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCCAGCGCTCACGCAGCTaGTGCATCTTCTGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: TASHWGPGCGSPPSPPQAQRSRS*CIFCAR
Trigger: GCGGGCGCAGAAGATGCAGCAGCTGCGTGAGCGCTG...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCGGTTCAAGTTGGAGTTaGCGGCCATGGCCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLGSSWS*RPWPAA
Trigger: TGCGGCGGGCCATGGCCGGCAACTCCAACTTGAACC...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTGTTGCTCAGGCCTaGGCCGGCATCGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSAVAQA*AGIGSP
Trigger: GGGGCTCCCGATGCCGGCCCAGGCCTGAGCAACAGC...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCCCGCTGTCCAGCTCCTaGCTGTTGCTCAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TASHWGPGCGSPPSPPQAPLSSS*LLLRPG
Trigger: CCCAGGCCTGAGCAACAGCCAGGAGCTGGACAGCGG...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCTTCCCGGGGTGTTGGTaGAGCTCGGGGGTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: TASHWGPGCGSPPSPPQAFPGCW*SSGVRP
Trigger: GGGACGAACCCCCGAGCTCCACCAACACCCCGGGAA...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCAGCATGGCCATCTCGTaGCCCAGGCTCTCGTTGCGG +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLSMAIS*PRLSLR
Trigger: CCGCAACGAGAGCCTGGGCCACGAGATGGCCATGCT...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCACAGCTCGTGCTTCTTaGGCTCGCTGGCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLTARAS*ARWPPG
Trigger: ACCTGGCGGCCAGCGAGCCCAAGAAGCACGAGCTGT...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTGGCTCTCGTTGCGGTTaGCGTCCAGGGCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFGSRCG*RPGRCC
Trigger: GCAACAGCGCCCTGGACGTCAACCGCAACGAGAGCC...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCATGTCGGACAGCTCGTaGTTCTTGGGCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLMSDSS*FLGSLA
Trigger: GGCCAGCGAGCCCAAGAAGCACGAGCTGTCCGACAT...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCCCCGGTGGAGGAGCTaGCTTGGCGGGGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSPRWRS*LGGGGN
Trigger: GTTGCCACCCCCGCCAAGGCAGCTCCTCCACCGGGG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGCGCTCCTCCGCGTGCTaGCTCCGGCCGGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQRSSAC*LRPASG
Trigger: TCCTGAGGCCGGCCGGAGGCAGCACGCGGAGGAGCG...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCGCTTCCGCTCCTCCTTaGTCCAGTAGCGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLASAPP*SSSGPS
Trigger: AGATGGGCCGCTACTGGAGCAAGGAGGAGCGGAAGC...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCCGGGCCCGGATCAGGTaGTGCTTCCGCTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSRARIR*CFRSSL
Trigger: CAAGGAGGAGCGGAAGCAGCACCTGATCCGGGCCCG...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCTTCCCGGGGTGTTGGTaGAGCTCGGGGGTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSFPGCW*SSGVRP
Trigger: GGGACGAACCCCCGAGCTCCACCAACACCCCGGGAA...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGTGGAGTTGCCGGCCATaGCCCGCCGCAGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQWSCRP*PAAGGS
Trigger: AGAGCCCCCTGCGGCGGGCCATGGCCGGCAACTCCA...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCGTGTGCCCCCAGTGCTaGCCACTGGCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: RLSLGSRLRIATKSSPGRVCPQC*PLAWSL
Trigger: AAGTGACCATGCCAGTGGCCAGCACTGGGGGCACAC...GCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTAGGTTAACTCTTCGCTaGCCGAGGCCAGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFRLTLR*PRPGAG
Trigger: GCCCGCGCCTGGCCTCGGCCAGCGAAGAGTTAACCT...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544474.5
CDS-3UTR TCA 90 bp CGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCCTGCTGGGCAGGGGGTaGTTTCAGTTTACGAGCACG +
Preference number: 4 (lower is better)
Translates to: RLSLGSRLRIATKSSPGRLLGRG*FQFTST
Trigger: CGTGCTCGTAAACTGAAATCACCCCCTGCCCAGCAG...GCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCACAAGCAGCGGGGTaGTGCGGCAGCTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQPQAAG*CGSSPQ
Trigger: CTGGGGAGAGCTGCCGCAGCACCCCGCTGCTTGTGG...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGGTTCAAGTTGGAGTTaGCGGCCATGGCCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSGSSWS*RPWPAA
Trigger: TGCGGCGGGCCATGGCCGGCAACTCCAACTTGAACC...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGCCCCGGTGGAGGAGCTaGCTTGGCGGGGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQPRWRS*LGGGGN
Trigger: GTTGCCACCCCCGCCAAGGCAGCTCCTCCACCGGGG...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGCCACTCCATGCGCGGTaGTTCAGTGGCCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQPLHAR*FSGRGR
Trigger: GCGGCCGCGGCCACTGAAGCACCGCGCATGGAGTGG...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCTGTCGCCATTCTGCTaGTCCCGCAGGCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFLSPFC*SRRHSS
Trigger: GCTGGAGTGCCTGCGGGAGCAGCAGAATGGCGACAG...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGGGTTGTAGACCCGCTTaGCATCGGCGGAGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQGCRPA*HRRSAR
Trigger: GCGCGCGCTCCGCCGATGGCAAGCGGGTCTACAACC...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCCCACTTCTGCCAGGCTaGCTGAAGGAGCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSPLLPG*LKELPA
Trigger: GGCTGGCAGCTCCTTCAGGCAGCCTGGCAGAAGTGG...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGGCTTCCCGGGGTGTTaGTGGAGCTCGGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSGFPGC*WSSGVR
Trigger: ACGAACCCCCGAGCTCCACCAACACCCCGGGAAGCC...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTAGCATGGCCATCTCGTaGCCCAGGCTCTCGTTGCGG +
Preference number: 4 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFSMAIS*PRLSLR
Trigger: CCGCAACGAGAGCCTGGGCCACGAGATGGCCATGCT...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTGGGTCCGGTTCAAGTTaGAGTTGCCGGCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFGSGSS*SCRPWP
Trigger: GGGCCATGGCCGGCAACTCCAACTTGAACCGGACCC...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCAGTACACGGGTCGGGTaGAGAGAGCACTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RLSLGSRLRIATKSSPGRSTRVG*REHWVC
Trigger: ACACACCCAGTGCTCTCTCCACCCGACCCGTGTACT...GCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCCTGCTCCAGATGGTGTaGGGCGCAGAACGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSLLQMV*GAERAL
Trigger: CAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAG...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCTCTCCAGGTGGCACTTaGTCTCCAGGAGCTCACGGT +
Preference number: 4 (lower is better)
Translates to: TASHWGPGCGSPPSPPQASPGGT*SPGAHG
Trigger: ACCGTGAGCTCCTGGAGATCAAGTGCCACCTGGAGA...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCTATTACATCCCATGTTaGTGGCCGGCGAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLYYIPC*WPARGG
Trigger: GCCTCCTCTCGCCGGCCAGCAACATGGGATGTAATA...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCCCTCCTCGTCGTCCGTaGGGTAGCAAACCATCAGGC +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSPPRRP*GSKPSG
Trigger: GCCTGATGGTTTGCTACCGCACGGACGACGAGGAGG...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCTCTCTTCGTTCCGGGTaGTCTCGTCAGTCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSSLRSG*SRQSGP
Trigger: TGGGCCGGACTGACGAGAGCACCCGGAACGAAGAGA...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCCGTCCAGGGCGCTGTTaGCTCCGGAGGCCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLRPGRC*LRRPGE
Trigger: TTCCCCGGGCCTCCGGAGGCAACAGCGCCCTGGACG...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCTCACTTTCCACTCCATaGGCGGTGCTTCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TASHWGPGCGSPPSPPQASLSTP*AVLQWP
Trigger: CGGCCACTGAAGCACCGCGCATGGAGTGGAAAGTGA...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGGGTTGTAGACCCGCTTaGCATCGGCGGAGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKGCRPA*HRRSAR
Trigger: GCGCGCGCTCCGCCGATGGCAAGCGGGTCTACAACC...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCGAGGAGATGTGTGCGTaGGCACAGCGAGCACGCGCG +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPEEMCA*AQRARA
Trigger: CGCGCGTGCTCGCTGTGCGCACGCACACATCTCCTC...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCGAGGAGATGTGTGCGTaGGCACAGCGAGCACGCGCG +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSEEMCA*AQRARA
Trigger: CGCGCGTGCTCGCTGTGCGCACGCACACATCTCCTC...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCCAGAAGAGAAGCCCCTaGTCCAGATGGTGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSQKRSP*SRWCGA
Trigger: CGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTG...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCACTTCCTGGCTCAGGATaGCCACCGCCTCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSLPGSG*PPPLPG
Trigger: ACCGGGAAGAGGCGGTGGCCATCCTGAGCCAGGAAG...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCGCTGTCCAGCTCCTaGCTGTTGCTCAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQPLSSS*LLLRPG
Trigger: CCCAGGCCTGAGCAACAGCCAGGAGCTGGACAGCGG...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCAAGAGGAGGCCCAGCTaGTTGCCGTTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSKRRPS*LPFSRW
Trigger: CCACCTGGAGAACGGCAACCAGCTGGGCCTCCTCTT...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCGCTCCTCCTCCAGCATaGCCATCTCGTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPAPPPA*PSRGPG
Trigger: GCCTGGGCCACGAGATGGCCATGCTGGAGGAGGAGC...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTGGAGTTGCCGGCCATaGCCCGCCGCAGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PEVFHCCSWGLVSRALTIWSCRP*PAAGGS
Trigger: AGAGCCCCCTGCGGCGGGCCATGGCCGGCAACTCCA...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGGGGTCAACCCCGTCTTaGGGTTGCGGCGGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: LCDFLVDTLQDPSVPAVLGSTPS*GCGGRA
Trigger: AGCGCGGCCGCCGCAACCCCAAGACGGGGTTGACCC...CAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGGCGGAGCGCGCGCCGTaGGCCAGCATCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERAERAP*ASISWM
Trigger: CATCCAGGAGATGCTGGCCCACGGCGCGCGCTCCGC...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCTCTGTGACTTCTTGGTaGACACCCTGCAGGACCCCT +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLSVTSW*TPCRTP
Trigger: AGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCCCCACCGCCTCTCACTaGGGTCCAGGTTGCGGATCG +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPPTASH*GPGCGS
Trigger: CGATCCGCAACCTGGACCCCAGTGAGAGGCGGTGGG...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp TCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCCATACTCCTCATCCGTaGGGCCCGGGACGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SVTSWWTPCRTPPFLQSCHTPHP*GPGRRP
Trigger: GGGGCGACGTCCCGGGCCTCACGGATGAGGAGTATG...GCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGCTCATCCAAGCGGTCTaGCTCCTGCGGGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERLIQAV*LLRAAL
Trigger: GAGGGCGGCCCGCAGGAGGCAGACCGCTTGGATGAG...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000164640.8
CDS-3UTR GCA 90 bp CGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCGCTTGTCCCGGTGGCTaGTTTTATACAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: RLSLGSRLRIATKSSPGRACPGG*FYTAPP
Trigger: AGGTGGAGCTGTATAAAAGCAGCCACCGGGACAAGC...GCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCGCAGCCAGGCCTTCATaGAGCGCTCACGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSAARPS*SAHAAA
Trigger: AGCAGCTGCGTGAGCGCTGCATGAAGGCCTGGCTGC...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTAGCGGGTTCCGTCGCTaGGCACCTTCACTTTCCACT +
Preference number: 4 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFSGFRR*APSLST
Trigger: AGTGGAAAGTGAAGGTGCGCAGCGACGGAACCCGCT...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGCGGGCCCGGATCAGGTaGTGCTTCCGCTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQRARIR*CFRSSL
Trigger: CAAGGAGGAGCGGAAGCAGCACCTGATCCGGGCCCG...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCTGTCGCCATTCTGCTaGTCCCGCAGGCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSLSPFC*SRRHSS
Trigger: GCTGGAGTGCCTGCGGGAGCAGCAGAATGGCGACAG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCCGGACACTCTCTTGTaGTCCTTTCAGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLPDTLL*SFQLSF
Trigger: GAAGCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGG...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTGGACCCCTCCGTTCCTaGAGTCTTGCTCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFGPLRS*SLALSE
Trigger: CTCAGAGAGAGCAAGACTGCAGGAACGGAGGGGTCC...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGGGCTTCCCGGGGTGTTaGTGGAGCTCGGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQGFPGC*WSSGVR
Trigger: ACGAACCCCCGAGCTCCACCAACACCCCGGGAAGCC...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCAGAGGGACCGGAACTTaGCGGGGCTCCCCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLRGTGT*RGSPVE
Trigger: CTCCACCGGGGAGCCCCGCCAAGTTCCGGTCCCTCT...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGTGTGCCCCCAGTGCTaGCCACTGGCATGGTCACTT +
Preference number: 4 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSVCPQC*PLAWSL
Trigger: AAGTGACCATGCCAGTGGCCAGCACTGGGGGCACAC...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGAGCCCCTGCTCCAGATaGTGTGGGGCGCAGAACGGG +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQSPCSR*CGAQNG
Trigger: CCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCT...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp CTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGGGCTCTCGTTGCGGTTaGCGTCCAGGGCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LCDFLVDTLQDPSVPAVLGSRCG*RPGRCC
Trigger: GCAACAGCGCCCTGGACGTCAACCGCAACGAGAGCC...CAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCGTATGTTGCGGCACTTaGATTCCAGGTGCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLVCCGT*IPGALA
Trigger: AGCTAAGGCACCTGGAATTCAAGTGCCGCAACATAC...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCCACACGTGCAAATCCTaGGGAGGTTGGGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPHTCKS*GGWGPL
Trigger: GAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTG...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCTTGCAGGCCAAACTTaGGCAGGCTTCCCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSLAGQT*AGFPGC
Trigger: ACACCCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGTGGAAGTCCCGGCTCTaGAGGGCGTCCCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERWKSRL*RASPCR
Trigger: CCTGCAAGGGGACGCCCTGCAGAGCCGGGACTTCCA...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCTGGAAGTCCCGGCTCTaGAGGGCGTCCCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RQPSSHVQILRRLGASPSWKSRL*RASPCR
Trigger: CCTGCAAGGGGACGCCCTGCAGAGCCGGGACTTCCA...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGCAGCGCTCACGCAGCTaGTGCATCTTCTGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERQRSRS*CIFCAR
Trigger: GCGGGCGCAGAAGATGCAGCAGCTGCGTGAGCGCTG...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGCAGGTGTGCCCCCAGTaGTGGCCACTGGCATGGTCA +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQQVCPQ*WPLAWS
Trigger: TGACCATGCCAGTGGCCAGCACTGGGGGCACACCTG...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGTGCCCATCACAGGTGTaGCCCCAGTGCTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQCPSQV*PQCWPL
Trigger: CAGTGGCCAGCACTGGGGGCACACCTGTGATGGGCA...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGCCACTTCTGCCAGGCTaGCTGAAGGAGCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKPLLPG*LKELPA
Trigger: GGCTGGCAGCTCCTTCAGGCAGCCTGGCAGAAGTGG...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCTCTTGGTGGACACCCTaGAGGACCCCTCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPSWWTP*RTPPFL
Trigger: CAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGA...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GCGGTCATGAGCCACCAGGCCTGGATGAAAGGCCCTTCTTCCGGTCGGGCCAAATACATCCCATGTTGCTaGCCGGCGAGAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: AVMSHQAWMKGPSSGRAKYIPCC*PARGGG
Trigger: TCCGCCTCCTCTCGCCGGCCAGCAACATGGGATGTA...TTTGGCCCGACCGGAAGAAGGGCCTTTCATCCAGGCCTGGTGGCTCATGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR CCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGCTTCCTGGCTCAGGATaGCCACCGCCTCTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKLPGSG*PPPLPG
Trigger: ACCGGGAAGAGGCGGTGGCCATCCTGAGCCAGGAAG...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCGCTTCTTGGGCTCGCTaGCCGCCAGGTCGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: RQPSSHVQILRRLGASPSASWAR*PPGRRG
Trigger: GCCTCTACGACCTGGCGGCCAGCGAGCCCAAGAAGC...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp TCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCGCTTCTTGGGCTCGCTaGCCGCCAGGTCGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: SVTSWWTPCRTPPFLQSCASWAR*PPGRRG
Trigger: GCCTCTACGACCTGGCGGCCAGCGAGCCCAAGAAGC...GCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGGGGTCCGGTTCAAGTTaGAGTTGCCGGCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKGSGSS*SCRPWP
Trigger: GGGCCATGGCCGGCAACTCCAACTTGAACCGGACCC...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCCTGCCTTGGCGGGGGTaGCAACAGCGGGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFLPWRG*QQRGRE
Trigger: CTCCCGGCCCCGCTGTTGCCACCCCCGCCAAGGCAG...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTTGGGCCAGCATCTCCTaGATGGTGATCCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFWASIS*MVIQLS
Trigger: GGACAACTGGATCACCATCCAGGAGATGCTGGCCCA...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGAGCCCCTGCTCCAGATaGTGTGGGGCGCAGAACGGG +
Preference number: 4 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERSPCSR*CGAQNG
Trigger: CCCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCT...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
3UTR CAA 72 bp AGATGGTGTGGGGCGCAGAACGGGCTCTGTGACTTCTaGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RWCGAQNGLCDF*VDTLQDPSVPA
Trigger: TGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCCACACCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
3UTR CAA 72 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTaGGGGGCCTCTCCTTCCCAGTCAGCCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: RQPSSHVQILRR*GASPSQSAHRL
Trigger: GAGGCGGTGGGCTGACTGGGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.6
ENST00000544474.5
CDS-3UTR TCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCACAGCTCACACGGTGGTaGCTGAGAGAAGAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSQLTRW*LREEGC
Trigger: ACAACCCTCTTCTCTCAGTCACCACCGTGTGAGCTG...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGTCTTGCTCTCTCTaGGTCACTGGGGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFQSCSL*VTGETG
Trigger: ACCTGTTTCCCCAGTGACTCAGAGAGAGCAAGACTG...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCTCCTTCCCGTTCACCTaGAGCATCACTTTGTACTGC +
Preference number: 4 (lower is better)
Translates to: TASHWGPGCGSPPSPPQASFPFT*SITLYC
Trigger: GCAGTACAAAGTGATGCTGCAGGTGAACGGGAAGGA...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000164640.8
CDS-3UTR GCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGCTTGTCCCGGTGGCTaGTTTTATACAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSACPGG*FYTAPP
Trigger: AGGTGGAGCTGTATAAAAGCAGCCACCGGGACAAGC...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGCCTCCTCGTCGTCCGTaGGGTAGCAAACCATCAGGC +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQPPRRP*GSKPSG
Trigger: GCCTGATGGTTTGCTACCGCACGGACGACGAGGAGG...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGTCTCTTCGTTCCGGGTaGTCTCGTCAGTCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQSLRSG*SRQSGP
Trigger: TGGGCCGGACTGACGAGAGCACCCGGAACGAAGAGA...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGTCCCCCAGCAGGTCGTaGTCAGAGCTCTCTTCGTTC +
Preference number: 4 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQSPSRS*SELSSF
Trigger: GAACGAAGAGAGCTCTGAGCACGACCTGCTGGGGGA...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCTGCAGGGCGTCCCCTTaGAGGCCAAACTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RQPSSHVQILRRLGASPSCRASP*RPNLRR
Trigger: CCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCA...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGTGCAGGGCGTCCCCTTaGAGGCCAAACTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LCDFLVDTLQDPSVPAVLCRASP*RPNLRR
Trigger: CCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCA...CAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCAGCTGCTGCATCTTCTaGGCCCGCAGTATGTTGCGG +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPSCCIF*ARSMLR
Trigger: CCGCAACATACTGCGGGCGCAGAAGATGCAGCAGCT...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCCGCTCACGCAGCTGCTaGATCTTCTGCGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: PEVFHCCSWGLVSRALTIRSRSC*IFCARS
Trigger: ACTGCGGGCGCAGAAGATGCAGCAGCTGCGTGAGCG...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCGCTCACGCAGCTGCTaGATCTTCTGCGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: LCDFLVDTLQDPSVPAVLRSRSC*IFCARS
Trigger: ACTGCGGGCGCAGAAGATGCAGCAGCTGCGTGAGCG...CAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGATGTCGGACAGCTCGTaGTTCTTGGGCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQMSDSS*FLGSLA
Trigger: GGCCAGCGAGCCCAAGAAGCACGAGCTGTCCGACAT...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCTCACTTTCCACTCCATaGGCGGTGCTTCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPSLSTP*AVLQWP
Trigger: CGGCCACTGAAGCACCGCGCATGGAGTGGAAAGTGA...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCGCTAACAAAGCCCTGTaGGCACACCCAGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSANKAL*AHPDEE
Trigger: CTCCTCGTCTGGGTGTGCGCACAGGGCTTTGTTAGC...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCCAGGTGTGCCCCCAGTaGTGGCCACTGGCATGGTCA +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLQVCPQ*WPLAWS
Trigger: TGACCATGCCAGTGGCCAGCACTGGGGGCACACCTG...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCTCAGCTTCCCTGTCTaGAAGTACACGGGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSLSFPV*KYTGRV
Trigger: CACCCGACCCGTGTACTTGCAGACAGGGAAGCTGAG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCGGACCCCTCCGTTCCTaGAGTCTTGCTCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSGPLRS*SLALSE
Trigger: CTCAGAGAGAGCAAGACTGCAGGAACGGAGGGGTCC...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGCACTGGGGTCCAGGTTaGGGATCGCCACCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQHWGPG*GSPPSP
Trigger: AGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTG...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCGTGGTGCAGTCTGTCTaGCTCCAATCTGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSVVQSV*LQSGAL
Trigger: GAGAGCCCCAGATTGGAGGCAGACAGACTGCACCAC...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGTACATCCCATGTTGCTaGCCGGCGAGAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQYIPCC*PARGGG
Trigger: TCCGCCTCCTCTCGCCGGCCAGCAACATGGGATGTA...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGCTGCGTCTCAGCACCTaGATCACCAGGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKLRLST*ITRGSL
Trigger: CAAGGAGCCCCTGGTGATCCAGGTGCTGAGACGCAG...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000164640.8
CDS-3UTR CCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCACCCAGCTTGTCCCGGTaGCTGCTTTTATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSPSLSR*LLLYSS
Trigger: GGAGCTGTATAAAAGCAGCCACCGGGACAAGCTGGG...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCTGGCTGCAATGCTGTTaGGATTTACCTCTCCGACAT +
Preference number: 4 (lower is better)
Translates to: RLSLGSRLRIATKSSPGRWLQCC*DLPLRH
Trigger: ATGTCGGAGAGGTAAATCCCAACAGCATTGCAGCCA...GCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCTTGGTGTTCTCTTCCTaGCTCAGGATGGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPLVFSS*LRMATA
Trigger: GGCGGTGGCCATCCTGAGCCAGGAAGAGAACACCAA...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGAGTCCATGCTGAAATaGAAGTCCCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSESMLK*KSRLCR
Trigger: CCTGCAGAGCCGGGACTTCCATTTCAGCATGGACTC...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCTGTTCCGCTTCTTCATaGTTTTGCGGTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSCSASS*FCGGSG
Trigger: CCCTGAGCCACCGCAAAACCATGAAGAAGCGGAACA...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCGCAGAGAGTCCATGCTaGAATGGAAGTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSAESPC*NGSPGS
Trigger: AGAGCCGGGACTTCCATTTCAGCATGGACTCTCTGC...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTATGTTGCGGCACTTaGATTCCAGGTGCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSVCCGT*IPGALA
Trigger: AGCTAAGGCACCTGGAATTCAAGTGCCGCAACATAC...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCTATTACATCCCATGTTaGTGGCCGGCGAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPYYIPC*WPARGG
Trigger: GCCTCCTCTCGCCGGCCAGCAACATGGGATGTAATA...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCCTCTCCGACATAAATaGCCAGGTCCTCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSPLRHK*PGPPRR
Trigger: ACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCCCTCTCCGACATAAATaGCCAGGTCCTCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPPLRHK*PGPPRR
Trigger: ACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGG...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGTCCCCCAGCAGGTCGTaGTCAGAGCTCTCTTCGTTC +
Preference number: 4 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKSPSRS*SELSSF
Trigger: GAACGAAGAGAGCTCTGAGCACGACCTGCTGGGGGA...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGCTTGCAGGCCAAACTTaGGCAGGCTTCCCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERLAGQT*AGFPGC
Trigger: ACACCCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAG...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCCCACAAGCAGCGGGGTaGTGCGGCAGCTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LEPSPSKHLPQFTQKRSPPQAAG*CGSSPQ
Trigger: CTGGGGAGAGCTGCCGCAGCACCCCGCTGCTTGTGG...GGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp TCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCGCTTCCGCTCCTCCTTaGTCCAGTAGCGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SVTSWWTPCRTPPFLQSCASAPP*SSSGPS
Trigger: AGATGGGCCGCTACTGGAGCAAGGAGGAGCGGAAGC...GCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGTTGCTGTCGCCATTCTaGTGCTCCCGCAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: LCDFLVDTLQDPSVPAVLLLSPF*CSRRHS
Trigger: GGAGTGCCTGCGGGAGCAGCAGAATGGCGACAGCAA...CAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCTTGCTGTCGCCATTCTaGTGCTCCCGCAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: RQPSSHVQILRRLGASPSLLSPF*CSRRHS
Trigger: GGAGTGCCTGCGGGAGCAGCAGAATGGCGACAGCAA...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCAGACGAGGAGATGTGTaGGTGCGCACAGCGAGCACG +
Preference number: 4 (lower is better)
Translates to: PEVFHCCSWGLVSRALTIRRGDV*VRTAST
Trigger: CGTGCTCGCTGTGCGCACGCACACATCTCCTCGTCT...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp TCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCAGACGAGGAGATGTGTaGGTGCGCACAGCGAGCACG +
Preference number: 4 (lower is better)
Translates to: SVTSWWTPCRTPPFLQSCRRGDV*VRTAST
Trigger: CGTGCTCGCTGTGCGCACGCACACATCTCCTCGTCT...GCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCTCTTGGTGGACACCCTaGAGGACCCCTCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RQPSSHVQILRRLGASPSSWWTP*RTPPFL
Trigger: CAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGA...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCCAGAAGAGAAGCCCCTaGTCCAGATGGTGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: PEVFHCCSWGLVSRALTIQKRSP*SRWCGA
Trigger: CGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTG...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCCACTGGGGTCCAGGTTaGGGATCGCCACCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PEVFHCCSWGLVSRALTIHWGPG*GSPPSP
Trigger: AGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTG...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGTACATCCCATGTTGCTaGCCGGCGAGAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LCDFLVDTLQDPSVPAVLYIPCC*PARGGG
Trigger: TCCGCCTCCTCTCGCCGGCCAGCAACATGGGATGTA...CAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCCAGCTTGTCCCGGTaGCTGCTTTTATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQPSLSR*LLLYSS
Trigger: GGAGCTGTATAAAAGCAGCCACCGGGACAAGCTGGG...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGTCGTTTCCGGGCTGCTaGGCAGGGGGTGATTTCAGT +
Preference number: 4 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKSFPGC*AGGDFS
Trigger: ACTGAAATCACCCCCTGCCCAGCAGCCCGGAAACGA...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCGAGTCCATGCTGAAATaGAAGTCCCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPESMLK*KSRLCR
Trigger: CCTGCAGAGCCGGGACTTCCATTTCAGCATGGACTC...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCAAGAGGAGGCCCAGCTaGTTGCCGTTCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PEVFHCCSWGLVSRALTIKRRPS*LPFSRW
Trigger: CCACCTGGAGAACGGCAACCAGCTGGGCCTCCTCTT...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCAGAGGGACCGGAACTTaGCGGGGCTCCCCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFRGTGT*RGSPVE
Trigger: CTCCACCGGGGAGCCCCGCCAAGTTCCGGTCCCTCT...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCATGTTCCGCTTCTTCATaGTTTTGCGGTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSCSASS*FCGGSG
Trigger: CCCTGAGCCACCGCAAAACCATGAAGAAGCGGAACA...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCATGCTGGCCACTGGCATaGTCACTTTACTTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSCWPLA*SLYLGR
Trigger: TCTGCCCAAGTAAAGTGACCATGCCAGTGGCCAGCA...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGAGTACACGGGTCGGGTaGAGAGAGCACTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQSTRVG*REHWVC
Trigger: ACACACCCAGTGCTCTCTCCACCCGACCCGTGTACT...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCTTCCCAGCCATCAGTaGAGAGGGGAGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSLPSHQ*RGEFHF
Trigger: GAAGTGGAACTCCCCTCTCCACTGATGGCTGGGAAG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GTGATGCTTGTGAGGCGGCAGAGGAGAGAGGATGGAGGAGGAGGAGCTGAGGCCATGAGCCACCAGGCCTaGATGAAAGGCCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VMLVRRQRREDGGGGAEAMSHQA*MKGPSS
Trigger: GGAAGAAGGGCCTTTCATCCAGGCCTGGTGGCTCAT...GGCCTCAGCTCCTCCTCCTCCATCCTCTCTCCTCTGCCGCCTCACAAGCATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR TCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGCTGCTGGGCAGGGGGTaGTTTCAGTTTACGAGCACG +
Preference number: 4 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERLLGRG*FQFTST
Trigger: CGTGCTCGTAAACTGAAATCACCCCCTGCCCAGCAG...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCTCTCCAGGTGGCACTTaGTCTCCAGGAGCTCACGGT +
Preference number: 4 (lower is better)
Translates to: RQPSSHVQILRRLGASPSSPGGT*SPGAHG
Trigger: ACCGTGAGCTCCTGGAGATCAAGTGCCACCTGGAGA...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCTCACACGGTGGTGACTaGGAGAAGAGGGTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSSHGGD*EKRVVD
Trigger: GTCTACAACCCTCTTCTCTCAGTCACCACCGTGTGA...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCCAGTCTTGCTCTCTCTaGGTCACTGGGGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPQSCSL*VTGETG
Trigger: ACCTGTTTCCCCAGTGACTCAGAGAGAGCAAGACTG...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp TGTTGGGATTTACCTCTCCGACATAAATGCCCAGGTCCTCCTCGTCGTCCGTGCGCCACCAGGCCTGGATaGAAGGCCCTTCTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: CWDLPLRHKCPGPPRRPCATRPG*KALLPV
Trigger: GACCGGAAGAAGGGCCTTTCATCCAGGCCTGGTGGC...GCACGGACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGGTAAATCCCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR GCA 90 bp CAATGCTGTTGGGATTTACCTCTCCGACATAAATGCCCAGGTCCTCCTCGTCGTCTCATCCAAGCGGTCTaGCTCCTGCGGGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: QCCWDLPLRHKCPGPPRRLIQAV*LLRAAL
Trigger: GAGGGCGGCCCGCAGGAGGCAGACCGCTTGGATGAG...ACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGGTAAATCCCAACAGCATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCACTTGAATTCCAGGTaGCTTAGCTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSHLNSR*LSSSSS
Trigger: GCTGGAGGAGGAGCTAAGGCACCTGGAATTCAAGTG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCAGCTGCTGCATCTTCTaGGCCCGCAGTATGTTGCGG +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLSCCIF*ARSMLR
Trigger: CCGCAACATACTGCGGGCGCAGAAGATGCAGCAGCT...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGAGCGGGTTCCGTCGCTaGGCACCTTCACTTTCCACT +
Preference number: 4 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERSGFRR*APSLST
Trigger: AGTGGAAAGTGAAGGTGCGCAGCGACGGAACCCGCT...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCGCTAACAAAGCCCTGTaGGCACACCCAGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: PEVFHCCSWGLVSRALTIANKAL*AHPDEE
Trigger: CTCCTCGTCTGGGTGTGCGCACAGGGCTTTGTTAGC...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCCTCAGCTTCCCTGTCTaGAAGTACACGGGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLLSFPV*KYTGRV
Trigger: CACCCGACCCGTGTACTTGCAGACAGGGAAGCTGAG...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCTTGTCTACAAATAACTaGAGTGCGCAGCGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSLSTNN*SAQRRG
Trigger: TCCCCGCCGCTGCGCACTGCAGTTATTTGTAGACAA...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGGTGGTGCAGTCTGTCTaGCTCCAATCTGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERVVQSV*LQSGAL
Trigger: GAGAGCCCCAGATTGGAGGCAGACAGACTGCACCAC...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp AACCATCAGGCCCAGCTTGTCCCGGTGGCTGCTTTTATACAGCTCCACCTCCTCCTGCGTCTCAGCACCTaGATCACCAGGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: NHQAQLVPVAAFIQLHLLLRLST*ITRGSL
Trigger: CAAGGAGCCCCTGGTGATCCAGGTGCTGAGACGCAG...GAGGAGGTGGAGCTGTATAAAAGCAGCCACCGGGACAAGCTGGGCCTGATGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR CCA 90 bp CTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGTTGGTGTTCTCTTCCTaGCTCAGGATGGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LCDFLVDTLQDPSVPAVLLVFSS*LRMATA
Trigger: GGCGGTGGCCATCCTGAGCCAGGAAGAGAACACCAA...CAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCTCGTTTCCGGGCTGCTaGGCAGGGGGTGATTTCAGT +
Preference number: 4 (lower is better)
Translates to: RQPSSHVQILRRLGASPSSFPGC*AGGDFS
Trigger: ACTGAAATCACCCCCTGCCCAGCAGCCCGGAAACGA...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCGCAGAGAGTCCATGCTaGAATGGAAGTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLAESPC*NGSPGS
Trigger: AGAGCCGGGACTTCCATTTCAGCATGGACTCTCTGC...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCCAGCTCACACGGTGGTaGCTGAGAGAAGAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: RQPSSHVQILRRLGASPSQLTRW*LREEGC
Trigger: ACAACCCTCTTCTCTCAGTCACCACCGTGTGAGCTG...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGCCGGCCGTCTTTGGCTaGAATGCTGTTGGGATTTAC +
Preference number: 4 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKPAVFG*NAVGIY
Trigger: GTAAATCCCAACAGCATTGCAGCCAAAGACGGCCGG...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCGCAGCCAGGCCTTCATaGAGCGCTCACGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LEPSPSKHLPQFTQKRSPAARPS*SAHAAA
Trigger: AGCAGCTGCGTGAGCGCTGCATGAAGGCCTGGCTGC...GGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCGTGTGTGCGTGCACGTaGAAGCACACGCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: RQPSSHVQILRRLGASPSVCACT*KHTQEH
Trigger: ATGCTCTTGCGTGTGCTTGCACGTGCACGCACACAC...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCATGGCTGCAATGCTGTTaGGATTTACCTCTCCGACAT +
Preference number: 4 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSWLQCC*DLPLRH
Trigger: ATGTCGGAGAGGTAAATCCCAACAGCATTGCAGCCA...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGTTGCCGTTCTCCAGGTaGCACTTGATCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERLPFSR*HLISRS
Trigger: GCTCCTGGAGATCAAGTGCCACCTGGAGAACGGCAA...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCTTGCCGTTCTCCAGGTaGCACTTGATCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLLPFSR*HLISRS
Trigger: GCTCCTGGAGATCAAGTGCCACCTGGAGAACGGCAA...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCACAGCTCGTGCTTCTTaGGCTCGCTGGCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFTARAS*ARWPPG
Trigger: ACCTGGCGGCCAGCGAGCCCAAGAAGCACGAGCTGT...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCCTTCCCAGCCATCAGTaGAGAGGGGAGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: PEVFHCCSWGLVSRALTILPSHQ*RGEFHF
Trigger: GAAGTGGAACTCCCCTCTCCACTGATGGCTGGGAAG...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTCCCACACCTCAGAGTaGAAGCCACCAGAACAGCTG +
Preference number: 4 (lower is better)
Translates to: PEVFHCCSWGLVSRALTISHTSE*KPPEQL
Trigger: CAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGA...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGTCTGTGACTTCTTGGTaGACACCCTGCAGGACCCCT +
Preference number: 4 (lower is better)
Translates to: LCDFLVDTLQDPSVPAVLSVTSW*TPCRTP
Trigger: AGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA...CAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCCTGCTCCAGATGGTGTaGGGCGCAGAACGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LEPSPSKHLPQFTQKRSPLLQMV*GAERAL
Trigger: CAGAGCCCGTTCTGCGCCCCACACCATCTGGAGCAG...GGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCGCATCTCCTGGATGGTaGTCCAGTTGTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLASPGW*SSCPGS
Trigger: AGATCCTGGACAACTGGATCACCATCCAGGAGATGC...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp TCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCGCATCTCCTGGATGGTaGTCCAGTTGTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: SVTSWWTPCRTPPFLQSCASPGW*SSCPGS
Trigger: AGATCCTGGACAACTGGATCACCATCCAGGAGATGC...GCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCTCACACGGTGGTGACTaGGAGAAGAGGGTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLSHGGD*EKRVVD
Trigger: GTCTACAACCCTCTTCTCTCAGTCACCACCGTGTGA...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR TCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCCACACGTGCAAATCCTaGGGAGGTTGGGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFHTCKS*GGWGPL
Trigger: GAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTG...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp ATAAATGCCCAGGTCCTCCTCGTCGTCCGTGCGGTAGCAAACCATCAGGCCCAGGCTTGTCCCGGTGGCTaGTTTTATACAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: INAQVLLVVRAVANHQAQACPGG*FYTAPP
Trigger: AGGTGGAGCTGTATAAAAGCAGCCACCGGGACAAGC...CTGGGCCTGATGGTTTGCTACCGCACGGACGACGAGGAGGACCTGGGCATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR GCA 90 bp AGGCCCAGCTTGTCCCGGTGGCTGCTTTTATACAGCTCCACCTCCTCATACTCCCCTCTCCGACATAAATaGCCAGGTCCTCCTCGTCGT +
Preference number: 4 (lower is better)
Translates to: RPSLSRWLLLYSSTSSYSPLRHK*PGPPRR
Trigger: ACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGG...GGAGTATGAGGAGGTGGAGCTGTATAAAAGCAGCCACCGGGACAAGCTGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR GCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCGTCTTTGGCTGCAATaGTGTTGGGATTTACCTCTC +
Preference number: 4 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQRLWLQ*CWDLPL
Trigger: GAGAGGTAAATCCCAACAGCATTGCAGCCAAAGACG...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCCCGGCCGTCTTTGGCTaGAATGCTGTTGGGATTTAC +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLPAVFG*NAVGIY
Trigger: GTAAATCCCAACAGCATTGCAGCCAAAGACGGCCGG...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCCCGGACACTCTCTTGTaGTCCTTTCAGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PEVFHCCSWGLVSRALTIPDTLL*SFQLSF
Trigger: GAAGCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGG...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTTGTCTACAAATAACTaGAGTGCGCAGCGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PEVFHCCSWGLVSRALTILSTNN*SAQRRG
Trigger: TCCCCGCCGCTGCGCACTGCAGTTATTTGTAGACAA...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCAGTACAAAGGCAGCTTaGTTTATTCTTGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: TASHWGPGCGSPPSPPQASTKAA*FILEMQ
Trigger: CTGCATCTCAAGAATAAAGCAAGCTGCCTTTGTACT...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCTGCTCCTCCGGTTTCTaGACCACGCACATATTACAT +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSCSSGF*TTHILH
Trigger: ATGTAATATGTGCGTGGTCCAGAAACCGGAGGAGCA...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGTCTACACCGTTAATCTaGATGATGCGGTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQSTPLI*MMRSPS
Trigger: TGAGGGAGACCGCATCATCCAGATTAACGGTGTAGA...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp TCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCGCCTCTTCCCGGTTCTaGACGTCTACACCGTTAATC +
Preference number: 4 (lower is better)
Translates to: SVTSWWTPCRTPPFLQSCASSRF*TSTPLI
Trigger: GATTAACGGTGTAGACGTCCAGAACCGGGAAGAGGC...GCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCTTCATGGTTTTGCGGTaGCTCAGGGCAATGATGTTG +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSFMVLR*LRAMML
Trigger: CAACATCATTGCCCTGAGCCACCGCAAAACCATGAA...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp TCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTGCTGGCCACTGGCATaGTCACTTTACTTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SVTSWWTPCRTPPFLQSCCWPLA*SLYLGR
Trigger: TCTGCCCAAGTAAAGTGACCATGCCAGTGGCCAGCA...GCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CATCAGGCCCAGCTTGTCCCGGTGGCTGCTTTTATACAGCTCCACCTCCTCATATATTACATCCCATGTTaGTGGCCGGCGAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HQAQLVPVAAFIQLHLLIYYIPC*WPARGG
Trigger: GCCTCCTCTCGCCGGCCAGCAACATGGGATGTAATA...TATGAGGAGGTGGAGCTGTATAAAAGCAGCCACCGGGACAAGCTGGGCCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR GCA 90 bp ATAAATGCCCAGGTCCTCCTCGTCGTCCGTGCGGTAGCAAACCATCAGGCCCAGAGCATCACTTTGTACTaGTCCTCCGGTTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: INAQVLLVVRAVANHQAQSITLY*SSGFWT
Trigger: GGTCCAGAAACCGGAGGAGCAGTACAAAGTGATGCT...CTGGGCCTGATGGTTTGCTACCGCACGGACGACGAGGAGGACCTGGGCATTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR GCA 90 bp GAGACAGACAAGGGATGCAAGAAGATTCAAGGAGTGATGCTTGTGAGGCGGCAGCCTCCTCGTCGTCCGTaGGGTAGCAAACCATCAGGC +
Preference number: 4 (lower is better)
Translates to: ETDKGCKKIQGVMLVRRQPPRRP*GSKPSG
Trigger: GCCTGATGGTTTGCTACCGCACGGACGACGAGGAGG...CTGCCGCCTCACAAGCATCACTCCTTGAATCTTCTTGCATCCCTTGTCTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR GCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCTACAGCTCCACCTCCTaGAGCATCACTTTGTACTGC +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLYSSTS*SITLYC
Trigger: GCAGTACAAAGTGATGCTGCAGGAGGTGGAGCTGTA...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544474.5
CDS-3UTR GCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCCGTCTTTGGCTGCAATaGTGTTGGGATTTACCTCTC +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLRLWLQ*CWDLPL
Trigger: GAGAGGTAAATCCCAACAGCATTGCAGCCAAAGACG...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp TGTTGGGATTTACCTCTCCGACATAAATGCCCAGGTCCTCCTCGTCGTCCGTGCCCGGCCGTCTTTGGCTaGAATGCTGTTGGGATTTAC +
Preference number: 4 (lower is better)
Translates to: CWDLPLRHKCPGPPRRPCPAVFG*NAVGIY
Trigger: GTAAATCCCAACAGCATTGCAGCCAAAGACGGCCGG...GCACGGACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGGTAAATCCCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR CCA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCTTCATGGTTTTGCGGTaGCTCAGGGCAATGATGTTG +
Preference number: 4 (lower is better)
Translates to: RQPSSHVQILRRLGASPSFMVLR*LRAMML
Trigger: CAACATCATTGCCCTGAGCCACCGCAAAACCATGAA...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCTGGGCCAGCATCTCCTaGATGGTGATCCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LEPSPSKHLPQFTQKRSPWASIS*MVIQLS
Trigger: GGACAACTGGATCACCATCCAGGAGATGCTGGCCCA...GGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGCATGGTCACTTTACTTaGGCAGAAGGAAGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKHGHFT*AEGRKA
Trigger: CGCTTTTCTTCCTTCTGCCCAAGTAAAGTGACCATG...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp CTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCCACTTGAATTCCAGGTaGCTTAGCTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LEPSPSKHLPQFTQKRSPHLNSR*LSSSSS
Trigger: GCTGGAGGAGGAGCTAAGGCACCTGGAATTCAAGTG...GGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp CAGGCCCAGCTTGTCCCGGTGGCTGCTTTTATACAGCTCCACCTCCTCATACTCTGCTCCTCCGGTTTCTaGACCACGCACATATTACAT +
Preference number: 4 (lower is better)
Translates to: QAQLVPVAAFIQLHLLILCSSGF*TTHILH
Trigger: ATGTAATATGTGCGTGGTCCAGAAACCGGAGGAGCA...GAGTATGAGGAGGTGGAGCTGTATAAAAGCAGCCACCGGGACAAGCTGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR CCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCGCCTCTTCCCGGTTCTaGACGTCTACACCGTTAATC +
Preference number: 4 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFASSRF*TSTPLI
Trigger: GATTAACGGTGTAGACGTCCAGAACCGGGAAGAGGC...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp ACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCTCTCTCCATGGTCACTTTACTTaGGCAGAAGGAAGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: TSWWTPCRTPPFLQSCSLHGHFT*AEGRKA
Trigger: CGCTTTTCTTCCTTCTGCCCAAGTAAAGTGACCATG...GAGAGAGCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCAGCATCACTTTGTACTaGTCCTCCGGTTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFSITLY*SSGFWT
Trigger: GGTCCAGAAACCGGAGGAGCAGTACAAAGTGATGCT...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR GCA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCACAAAAATCAGGGGTaGCTTTGTCTACAAATAACT +
Preference number: 4 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSHKNQG*LCLQIT
Trigger: AGTTATTTGTAGACAAAGGCACCCCTGATTTTTGTG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp GCTGTTGGGATTTACCTCTCCGACATAAATGCCCAGGTCCTCCTCGTCGTCCGTTGGCTGCAATGCTGTTaGGATTTACCTCTCCGACAT +
Preference number: 4 (lower is better)
Translates to: AVGIYLSDINAQVLLVVRWLQCC*DLPLRH
Trigger: ATGTCGGAGAGGTAAATCCCAACAGCATTGCAGCCA...ACGGACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGGTAAATCCCAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR TCA 90 bp GAGACAGACAAGGGATGCAAGAAGATTCAAGGAGTGATGCTTGTGAGGCGGCAGGAGCAGGTAGAGGAATaGGACAGACAAGGGATGCAA +
Preference number: 4 (lower is better)
Translates to: ETDKGCKKIQGVMLVRRQEQVEE*DRQGMQ
Trigger: TTGCATCCCTTGTCTGTCTCATTCCTCTACCTGCTC...CTGCCGCCTCACAAGCATCACTCCTTGAATCTTCTTGCATCCCTTGTCTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR GCA 90 bp GAGACAGACAAGGGATGCAAGAAGATTCAAGGAGTGATGCTTGTGAGGCGGCAGTCCTTCCCGTTCACCTaGAGCATCACTTTGTACTGC +
Preference number: 4 (lower is better)
Translates to: ETDKGCKKIQGVMLVRRQSFPFT*SITLYC
Trigger: GCAGTACAAAGTGATGCTGCAGGTGAACGGGAAGGA...CTGCCGCCTCACAAGCATCACTCCTTGAATCTTCTTGCATCCCTTGTCTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR GCA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGCACAAAAATCAGGGGTaGCTTTGTCTACAAATAACT +
Preference number: 4 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERHKNQG*LCLQIT
Trigger: AGTTATTTGTAGACAAAGGCACCCCTGATTTTTGTG...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CCA 90 bp TTCAGAGCAGGTAGAGGAATGAGACAGACAAGGGATGCAAGAAGATTCAAGGAGCCCAGCTTGTCCCGGTaGCTGCTTTTATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: FRAGRGMRQTRDARRFKEPSLSR*LLLYSS
Trigger: GGAGCTGTATAAAAGCAGCCACCGGGACAAGCTGGG...CTCCTTGAATCTTCTTGCATCCCTTGTCTGTCTCATTCCTCTACCTGCTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR GCA 90 bp TTCAGAGCAGGTAGAGGAATGAGACAGACAAGGGATGCAAGAAGATTCAAGGAGCGTCTTTGGCTGCAATaGTGTTGGGATTTACCTCTC +
Preference number: 4 (lower is better)
Translates to: FRAGRGMRQTRDARRFKERLWLQ*CWDLPL
Trigger: GAGAGGTAAATCCCAACAGCATTGCAGCCAAAGACG...CTCCTTGAATCTTCTTGCATCCCTTGTCTGTCTCATTCCTCTACCTGCTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS TCA 90 bp CCGGCGAGAGGAGGCGGAGGGCGGGAACGGGAAGACGCCTTTCACTaGCCCGGGCGCGGGACCTCGGGTCCCGGGCCGGGGCCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: PARGGGGREREDAFH*PGRGTSGPGPGPGA
Trigger: GGCCCCTGGCCCCGGCCCGGGACCCGAGGTCCCGCGCCCGGGTCAGTGAAAGGCGTCTTCCCGTTCCCGCCCTCCGCCTCCTCTCGCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000480418.5
ENST00000544474.5
CDS GCA 90 bp GTCAACCCCGTCTTGGGGTTGCGGCGGCCGCGCTCCTCCGCGTGCTaGCTCCGGCCGGCCTCAGGATCCCGGGAGAGGGACCGGAACTTG +
Preference number: 5 (lower is better)
Translates to: VNPVLGLRRPRSSAC*LRPASGSRERDRNL
Trigger: CAAGTTCCGGTCCCTCTCCCGGGATCCTGAGGCCGGCCGGAGGCAGCACGCGGAGGAGCGCGGCCGCCGCAACCCCAAGACGGGGTTGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS-3UTR CAA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCGGTGGAGGAGCTGCCTaGGCGGGGGTGGCAACAGCG +
Preference number: 5 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLGGGAA*AGVATA
Trigger: CGCTGTTGCCACCCCCGCCAAGGCAGCTCCTCCACC...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCGAGAGGGACCGGAACTaGGCGGGGCTCCCCGGTGGA +
Preference number: 5 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLERDRN*AGLPGG
Trigger: TCCACCGGGGAGCCCCGCCAAGTTCCGGTCCCTCTC...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS TCA 90 bp GGGCCTGGGCCGTGTACCCGCCCGGGCAGCTCACACGGTGGTGACTaGGAGAAGAGGGTTGTAGACCCGCTTGCCATCGGCGGAGCGCGC +
Preference number: 5 (lower is better)
Translates to: GPGPCTRPGSSHGGD*EKRVVDPLAIGGAR
Trigger: GCGCGCTCCGCCGATGGCAAGCGGGTCTACAACCCTCTTCTCTCAGTCACCACCGTGTGAGCTGCCCGGGCGGGTACACGGCCCAGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS-3UTR CAA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCACGTCCAGGGCGCTGTaGCCTCCGGAGGCCCGGGGA +
Preference number: 5 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSTSRAL*PPEARG
Trigger: TCCCCGGGCCTCCGGAGGCAACAGCGCCCTGGACGT...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCGCTGGCCCAGGCTCTCGTaGCGGTTGACGTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: RLSLGSRLRIATKSSPGRWPRLS*RLTSRA
Trigger: CGCCCTGGACGTCAACCGCAACGAGAGCCTGGGCCA...GCGGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTAGGGTCAACCCCGTCTaGGGGTTGCGGCGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFRVNPV*GLRRPR
Trigger: GCGCGGCCGCCGCAACCCCAAGACGGGGTTGACCCT...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS TCA 90 bp CCCTGGGCCTGGGCCGTGTACCCGCCCGGGCAGCTCACACGGTGGTaGCTGAGAGAAGAGGGTTGTAGACCCGCTTGCCATCGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: PWAWAVYPPGQLTRW*LREEGCRPACHRRS
Trigger: GCTCCGCCGATGGCAAGCGGGTCTACAACCCTCTTCTCTCAGTCACCACCGTGTGAGCTGCCCGGGCGGGTACACGGCCCAGGCCCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS GCA 90 bp TGCTCTCGTCAGTCCGGCCCACCCCGCTGTCCAGCTCCTGGCTGTTaGTCAGGCCTGGGCCGGCATCGGGAGCCCCCTTCTCCTCTTCGT +
Preference number: 5 (lower is better)
Translates to: CSRQSGPPRCPAPGC*SGLGRHREPPSPLR
Trigger: ACGAAGAGGAGAAGGGGGCTCCCGATGCCGGCCCAGGCCTGAGCAACAGCCAGGAGCTGGACAGCGGGGTGGGCCGGACTGACGAGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS-3UTR CAA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCTGGCCCAGGCTCTCGTaGCGGTTGACGTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: TASHWGPGCGSPPSPPQAWPRLS*RLTSRA
Trigger: CGCCCTGGACGTCAACCGCAACGAGAGCCTGGGCCA...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCGCGCTGGTGCTGTCCTaGTCCGACTTCTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLALVLS*SDFSGS
Trigger: GCTGCCCGAGAAGTCGGACAAGGACAGCACCAGCGC...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS TCA 90 bp CCTCCTCCAGCATGGCCATCTCGTGGCCCAGGCTCTCGTTGCGGTTaGCGTCCAGGGCGCTGTTGCCTCCGGAGGCCCGGGGAAAGAGGA +
Preference number: 5 (lower is better)
Translates to: PPPAWPSRGPGSRCG*RPGRCCLRRPGERG
Trigger: TCCTCTTTCCCCGGGCCTCCGGAGGCAACAGCGCCCTGGACGTCAACCGCAACGAGAGCCTGGGCCACGAGATGGCCATGCTGGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 90 bp CGGGCAGCTCGGAGATGTCGGACAGCTCGTGCTTCTTGGGCTCGCTaGCCGCCAGGTCGTAGAGGCTCTCCTCCTCCAGCAGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: RAARRCRTARASWAR*PPGRRGSPPPAARP
Trigger: AGGCCTGGCTGCTGGAGGAGGAGAGCCTCTACGACCTGGCGGCCAGCGAGCCCAAGAAGCACGAGCTGTCCGACATCTCCGAGCTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS-3UTR CAA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGACAGCTCGTGCTTCTaGGGCTCGCTGGCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSDSSCF*GSLAAR
Trigger: CCTGGCGGCCAGCGAGCCCAAGAAGCACGAGCTGTC...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGGTGGAGGAGCTGCCTaGGCGGGGGTGGCAACAGCG +
Preference number: 5 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSGGGAA*AGVATA
Trigger: CGCTGTTGCCACCCCCGCCAAGGCAGCTCCTCCACC...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCAACCCCGTCTTGGGGTaGCGGCGGCCGCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSNPVLG*RRPRSS
Trigger: GGAGGAGCGCGGCCGCCGCAACCCCAAGACGGGGTT...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS GCA 90 bp GTTCGTCCCCCAGCAGGTCGTGCTCAGAGCTCTCTTCGTTCCGGGTaGTCTCGTCAGTCCGGCCCACCCCGCTGTCCAGCTCCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: VRPPAGRAQSSLRSG*SRQSGPPRCPAPGC
Trigger: ACAGCCAGGAGCTGGACAGCGGGGTGGGCCGGACTGACGAGAGCACCCGGAACGAAGAGAGCTCTGAGCACGACCTGCTGGGGGACGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 90 bp GGAGGCGGGGGCTGCGTCTCAGCACCTGGATCACCAGGGGCTCCTTaGAGGAGCGCAGGGCCTGCAGAGTTTGCTCCTGAGACAGCTTGG +
Preference number: 5 (lower is better)
Translates to: GGGGCVSAPGSPGAP*RSAGPAEFAPETAW
Trigger: CCAAGCTGTCTCAGGAGCAAACTCTGCAGGCCCTGCGCTCCTCCAAGGAGCCCCTGGTGATCCAGGTGCTGAGACGCAGCCCCCGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000468491.1
ENST00000475140.5
ENST00000480650.3
ENST00000483693.5
CDS-3UTR CAA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCAGGCTCTCGTTGCGGTaGACGTCCAGGGCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: TASHWGPGCGSPPSPPQARLSLR*TSRALL
Trigger: CAACAGCGCCCTGGACGTCAACCGCAACGAGAGCCT...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCACGGTTCAAGTTGGAGTaGCCGGCCATGGCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSRFKLE*PAMARR
Trigger: GCGGCGGGCCATGGCCGGCAACTCCAACTTGAACCG...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCTCACTGGGGTCCAGGTaGCGGATCGCCACCAAGTCC +
Preference number: 5 (lower is better)
Translates to: TASHWGPGCGSPPSPPQASLGSR*RIATKS
Trigger: GGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGA...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS TCA 90 bp GATGCTTGTGAGGCGGCAGAGGAGAGAGGATGGAGGAGGAGGAGCTaGGGCCCTCAACCCTGGCACTTCCGGCAGCGACGTCCCGGACAG +
Preference number: 5 (lower is better)
Translates to: DACEAAEERGWRRRS*GPQPWHFRQRRPGQ
Trigger: CTGTCCGGGACGTCGCTGCCGGAAGTGCCAGGGTTGAGGGCCTCAGCTCCTCCTCCTCCATCCTCTCTCCTCTGCCGCCTCACAAGCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468491.1
ENST00000480650.3
ENST00000483693.5
ENST00000484792.5
CDS GCA 90 bp CCCTCGGCCAGCAGAGAGTCCATGCTGAAATGGAAGTCCCGGCTCTaGAGGGCGTCCCCTTGCAGGCCAAACTTGCGCAGGCTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: PSASRESMLKWKSRL*RASPCRPNLRRLPG
Trigger: CCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAGAGCCGGGACTTCCATTTCAGCATGGACTCTCTGCTGGCCGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 90 bp CCGACTTCTCGGGCAGCTCGGAGATGTCGGACAGCTCGTGCTTCTTaGGCTCGCTGGCCGCCAGGTCGTAGAGGCTCTCCTCCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: PTSRAARRCRTARAS*ARWPPGRRGSPPPA
Trigger: TGCTGGAGGAGGAGAGCCTCTACGACCTGGCGGCCAGCGAGCCCAAGAAGCACGAGCTGTCCGACATCTCCGAGCTGCCCGAGAAGTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS-3UTR CAA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCAGGCTTCCCGGGGTGTaGGTGGAGCTCGGGGGTTCG +
Preference number: 5 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPRLPGV*VELGGS
Trigger: CGAACCCCCGAGCTCCACCAACACCCCGGGAAGCCT...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCACGTCCAGGGCGCTGTaGCCTCCGGAGGCCCGGGGA +
Preference number: 5 (lower is better)
Translates to: PEVFHCCSWGLVSRALTITSRAL*PPEARG
Trigger: TCCCCGGGCCTCCGGAGGCAACAGCGCCCTGGACGT...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCGCTGGTGCTGTCCTaGTCCGACTTCTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RGEAALSSEAGHSLVLLSALVLS*SDFSGS
Trigger: GCTGCCCGAGAAGTCGGACAAGGACAGCACCAGCGC...TGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGGAGAGGGACCGGAACTaGGCGGGGCTCCCCGGTGGA +
Preference number: 5 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQERDRN*AGLPGG
Trigger: TCCACCGGGGAGCCCCGCCAAGTTCCGGTCCCTCTC...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCAACCCCGTCTTGGGGTaGCGGCGGCCGCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RQPSSHVQILRRLGASPSNPVLG*RRPRSS
Trigger: GGAGGAGCGCGGCCGCCGCAACCCCAAGACGGGGTT...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCATATTACATCCCATGTaGCTGGCCGGCGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLILHPM*LAGERR
Trigger: CCTCCTCTCGCCGGCCAGCAACATGGGATGTAATAT...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCCCTTGCAGGCCAAACTaGCGCAGGCTTCCCGGGGTG +
Preference number: 5 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPPCRPN*RRLPGV
Trigger: CACCCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAGG...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCCTGCAGGGCGTCCCCTaGCAGGCCAAACTTGCGCAG +
Preference number: 5 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPLQGVP*QAKLAQ
Trigger: CTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAG...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCCTGCAGGGCGTCCCCTaGCAGGCCAAACTTGCGCAG +
Preference number: 5 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSLQGVP*QAKLAQ
Trigger: CTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAG...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGGACAGCTCGTGCTTCTaGGGCTCGCTGGCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQDSSCF*GSLAAR
Trigger: CCTGGCGGCCAGCGAGCCCAAGAAGCACGAGCTGTC...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCGGGGTCCGGTTCAAGTaGGAGTTGCCGGCCATGGCC +
Preference number: 5 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSGVRFK*ELPAMA
Trigger: GGCCATGGCCGGCAACTCCAACTTGAACCGGACCCC...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp ACCGCCTCTCACTGGGGTCCAGGTTGCGGATCGCCACCAAGTCCTCCCCAGGCCCTCAGGGCAATGATGTaGAGCTCGGGCTTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: TASHWGPGCGSPPSPPQALRAMM*SSGLLS
Trigger: CGACAGCAAGCCCGAGCTCAACATCATTGCCCTGAG...GGCCTGGGGAGGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGAGAGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCGCTTCTTCATGGTTTaGCGGTGGCTCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLRFFMV*RWLRAM
Trigger: CATTGCCCTGAGCCACCGCAAAACCATGAAGAAGCG...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CAGCGGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCTCCGTTCCTGCAGTCTaGCTCTCTCTGAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: QRRGEAALSSEAGHSLVLSVPAV*LSLSHW
Trigger: CCAGTGACTCAGAGAGAGCAAGACTGCAGGAACGGA...GAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGGGCTCTGTGACTTCTaGGTGGACACCCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSGLCDF*VDTLQD
Trigger: GTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCC...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS GCA 90 bp ACTGCTCCTCCGGTTTCTGGACCACGCACATATTACATCCCATGTTaGTGGCCGGCGAGAGGAGGCGGAGGGCGGGAACGGGAAGACGCC +
Preference number: 5 (lower is better)
Translates to: TAPPVSGPRTYYIPC*WPARGGGGREREDA
Trigger: GGCGTCTTCCCGTTCCCGCCCTCCGCCTCCTCTCGCCGGCCAGCAACATGGGATGTAATATGTGCGTGGTCCAGAAACCGGAGGAGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000480418.5
ENST00000480650.3
ENST00000544474.5
CDS GCA 90 bp GAGTCCATGCTGAAATGGAAGTCCCGGCTCTGCAGGGCGTCCCCTTaGAGGCCAAACTTGCGCAGGCTTCCCGGGGTGTTGGTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: ESMLKWKSRLCRASP*RPNLRRLPGVLVEL
Trigger: GAGCTCCACCAACACCCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAGAGCCGGGACTTCCATTTCAGCATGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS-3UTR CAA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCAGGCTTCCCGGGGTGTaGGTGGAGCTCGGGGGTTCG +
Preference number: 5 (lower is better)
Translates to: RQPSSHVQILRRLGASPSRLPGV*VELGGS
Trigger: CGAACCCCCGAGCTCCACCAACACCCCGGGAAGCCT...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTTGCGCCCGCAGTATGTaGCGGCACTTGAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFCARSM*RHLNSR
Trigger: CCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCA...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCTGCGCCCGCAGTATGTaGCGGCACTTGAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSCARSM*RHLNSR
Trigger: CCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCA...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp TCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCCGGTTCAAGTTGGAGTaGCCGGCCATGGCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: SVTSWWTPCRTPPFLQSCRFKLE*PAMARR
Trigger: GCGGCGGGCCATGGCCGGCAACTCCAACTTGAACCG...GCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS CCA 90 bp GCTCCTCCGGTTTCTGGACCACGCACATATTACATCCCATGTTGCTaGCCGGCGAGAGGAGGCGGAGGGCGGGAACGGGAAGACGCCTTT +
Preference number: 5 (lower is better)
Translates to: APPVSGPRTYYIPCC*PARGGGGREREDAF
Trigger: AAAGGCGTCTTCCCGTTCCCGCCCTCCGCCTCCTCTCGCCGGCCAGCAACATGGGATGTAATATGTGCGTGGTCCAGAAACCGGAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000480418.5
ENST00000480650.3
ENST00000544474.5
CDS-3UTR CAA 90 bp GGCGGGGAGAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTATATTACATCCCATGTaGCTGGCCGGCGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GGERPRSAAKPDTLLCSFILHPM*LAGERR
Trigger: CCTCCTCTCGCCGGCCAGCAACATGGGATGTAATAT...AAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTCTCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp TCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCGTGGGCGGACGCAGCTaGCCCAGCGCCATGATATGC +
Preference number: 5 (lower is better)
Translates to: SVTSWWTPCRTPPFLQSCVGGRS*PSAMIC
Trigger: GCATATCATGGCGCTGGGCAAGCTGCGTCCGCCCAC...GCAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000164640.8
CDS-3UTR CAA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCCCTTGCAGGCCAAACTaGCGCAGGCTTCCCGGGGTG +
Preference number: 5 (lower is better)
Translates to: PEVFHCCSWGLVSRALTIPCRPN*RRLPGV
Trigger: CACCCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAGG...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCAGGGTCAACCCCGTCTaGGGGTTGCGGCGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: AHGAWFLEPSPSKHLPQFRVNPV*GLRRPR
Trigger: GCGCGGCCGCCGCAACCCCAAGACGGGGTTGACCCT...GAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCCGCTTCTTCATGGTTTaGCGGTGGCTCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSRFFMV*RWLRAM
Trigger: CATTGCCCTGAGCCACCGCAAAACCATGAAGAAGCG...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCAAATCCTGAGGAGGTaGGGGGCCTCTCCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQQILRR*GASPSQ
Trigger: CTGGGAAGGAGAGGCCCCCAACCTCCTCAGGATTTG...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS GCA 90 bp TCCTCCTCCAGCAGCCAGGCCTTCATGCAGCGCTCACGCAGCTGCTaGATCTTCTGCGCCCGCAGTATGTTGCGGCACTTGAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSSSSQAFMQRSRSC*IFCARSMLRHLNSR
Trigger: CCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCAGAAGATGCAGCAGCTGCGTGAGCGCTGCATGAAGGCCTGGCTGCTGGAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 90 bp CTCTCAGGTCGGGCCACCAGCAGGGAGATGTTGGTGTTCTCTTCCTaGCTCAGGATGGCCACCGCCTCTTCCCGGTTCTGGACGTCTACA +
Preference number: 5 (lower is better)
Translates to: LSGRATSREMLVFSS*LRMATASSRFWTST
Trigger: TGTAGACGTCCAGAACCGGGAAGAGGCGGTGGCCATCCTGAGCCAGGAAGAGAACACCAACATCTCCCTGCTGGTGGCCCGACCTGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000475140.5
ENST00000484792.5
ENST00000544474.5
CDS CCA 90 bp TTTTCGCCAGCTGACTCTCAGGTCGGGCCACCAGCAGGGAGATGTTaGTGTTCTCTTCCTGGCTCAGGATGGCCACCGCCTCTTCCCGGT +
Preference number: 5 (lower is better)
Translates to: FSPADSQVGPPAGRC*CSLPGSGWPPPLPG
Trigger: ACCGGGAAGAGGCGGTGGCCATCCTGAGCCAGGAAGAGAACACCAACATCTCCCTGCTGGTGGCCCGACCTGAGAGTCAGCTGGCGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000475140.5
ENST00000484792.5
ENST00000544474.5
CDS CCA 90 bp TTGAATTCCAGGTGCCTTAGCTCCTCCTCCAGCATGGCCATCTCGTaGCCCAGGCTCTCGTTGCGGTTGACGTCCAGGGCGCTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: LNSRCLSSSSSMAIS*PRLSLRLTSRALLP
Trigger: AGGCAACAGCGCCCTGGACGTCAACCGCAACGAGAGCCTGGGCCACGAGATGGCCATGCTGGAGGAGGAGCTAAGGCACCTGGAATTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS-3UTR CAA 90 bp GCGGTCATGAGCCACCAGGCCTGGATGAAAGGCCCTTCTTCCGGTCGGGCCAAACAGGGCCTGCAGAGTTaGCTCCTGAGACAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: AVMSHQAWMKGPSSGRAKQGLQS*LLRQLG
Trigger: TCCAAGCTGTCTCAGGAGCAAACTCTGCAGGCCCTG...TTTGGCCCGACCGGAAGAAGGGCCTTTCATCCAGGCCTGGTGGCTCATGACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR CAA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCAGGCTCTCGTTGCGGTaGACGTCCAGGGCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RQPSSHVQILRRLGASPSRLSLR*TSRALL
Trigger: CAACAGCGCCCTGGACGTCAACCGCAACGAGAGCCT...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GAGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGATGTTGAGCTCGGGCTaGCTGTCGCCATTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: EAALSSEAGHSLVLLSAQMLSSG*LSPFCC
Trigger: GCAGCAGAATGGCGACAGCAAGCCCGAGCTCAACAT...CTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GGGAAGGGGTGGTGCAGTCTGTCTGCCTCCAATCTGGGGCTCTCCAAGCCTAAGGGGCTCTGTGACTTCTaGGTGGACACCCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GKGWCSLSASNLGLSKPKGLCDF*VDTLQD
Trigger: GTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCC...CTTAGGCTTGGAGAGCCCCAGATTGGAGGCAGACAGACTGCACCACCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCTCACTGGGGTCCAGGTaGCGGATCGCCACCAAGTCC +
Preference number: 5 (lower is better)
Translates to: RQPSSHVQILRRLGASPSSLGSR*RIATKS
Trigger: GGACTTGGTGGCGATCCGCAACCTGGACCCCAGTGA...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS GCA 90 bp TGCATCTTCTGCGCCCGCAGTATGTTGCGGCACTTGAATTCCAGGTaGCTTAGCTCCTCCTCCAGCATGGCCATCTCGTGGCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CIFCARSMLRHLNSR*LSSSSSMAISWPRL
Trigger: GAGCCTGGGCCACGAGATGGCCATGCTGGAGGAGGAGCTAAGGCACCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCAGAAGATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS GCA 90 bp AGCAGCCAGGCCTTCATGCAGCGCTCACGCAGCTGCTGCATCTTCTaGGCCCGCAGTATGTTGCGGCACTTGAATTCCAGGTGCCTTAGC +
Preference number: 5 (lower is better)
Translates to: SSQAFMQRSRSCCIF*ARSMLRHLNSRCLS
Trigger: GCTAAGGCACCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCAGAAGATGCAGCAGCTGCGTGAGCGCTGCATGAAGGCCTGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS-3UTR CAA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGCAGGGCCTGCAGAGTTaGCTCCTGAGACAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQQGLQS*LLRQLG
Trigger: TCCAAGCTGTCTCAGGAGCAAACTCTGCAGGCCCTG...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000164640.8
CDS-3UTR CAA 90 bp CTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGCAAATCCTGAGGAGGTaGGGGGCCTCTCCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: LCDFLVDTLQDPSVPAVLQILRR*GASPSQ
Trigger: CTGGGAAGGAGAGGCCCCCAACCTCCTCAGGATTTG...CAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS TCA 90 bp CACGCAGCTGCTGCATCTTCTGCGCCCGCAGTATGTTGCGGCACTTaGATTCCAGGTGCCTTAGCTCCTCCTCCAGCATGGCCATCTCGT +
Preference number: 5 (lower is better)
Translates to: HAAAASSAPAVCCGT*IPGALAPPPAWPSR
Trigger: ACGAGATGGCCATGCTGGAGGAGGAGCTAAGGCACCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCAGAAGATGCAGCAGCTGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS-3UTR CAA 90 bp CGGGCCGCCCTCCATAAACTCCGCCGGGTCATAATACTCATGGCTGATTGGGGGATATTACATCCCATGTaGCTGGCCGGCGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RAALHKLRRVIILMADWGILHPM*LAGERR
Trigger: CCTCCTCTCGCCGGCCAGCAACATGGGATGTAATAT...CCCCCAATCAGCCATGAGTATTATGACCCGGCGGAGTTTATGGAGGGCGGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR CAA 90 bp GAGGCTCCCCGTTCCCACACCTCAGAGTGGAAGCCACCAGAACAGCTGCTTCCCACCTGCAGCATCACTTaGTACTGCTCCTCCGGTTTC +
Preference number: 5 (lower is better)
Translates to: EAPRSHTSEWKPPEQLLPTCSIT*YCSSGF
Trigger: GAAACCGGAGGAGCAGTACAAAGTGATGCTGCAGGT...GGGAAGCAGCTGTTCTGGTGGCTTCCACTCTGAGGTGTGGGAACGGGGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000164640.8
CDS-3UTR CAA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCACCATCAGGCCCAGCTaGTCCCGGTGGCTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: PEVFHCCSWGLVSRALTITIRPS*SRWLLL
Trigger: TAAAAGCAGCCACCGGGACAAGCTGGGCCTGATGGT...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCACCATCAGGCCCAGCTaGTCCCGGTGGCTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: RQPSSHVQILRRLGASPSTIRPS*SRWLLL
Trigger: TAAAAGCAGCCACCGGGACAAGCTGGGCCTGATGGT...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGACCAGCAGGGAGATGTaGGTGTTCTCTTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQTSREM*VFSSWL
Trigger: GAGCCAGGAAGAGAACACCAACATCTCCCTGCTGGT...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CTAGAGCCCTCACCATCTAAGCACCTTCCTCAGTTCACTCAGAAGAGAAGCCCCGGGGTCCGGTTCAAGTaGGAGTTGCCGGCCATGGCC +
Preference number: 5 (lower is better)
Translates to: LEPSPSKHLPQFTQKRSPGVRFK*ELPAMA
Trigger: GGCCATGGCCGGCAACTCCAACTTGAACCGGACCCC...GGGGCTTCTCTTCTGAGTGAACTGAGGAAGGTGCTTAGATGGTGAGGGCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp AGGCAGCCTAGTTCACACGTGCAAATCCTGAGGAGGTTGGGGGCCTCTCCTTCCATGTTGAGCTCGGGCTaGCTGTCGCCATTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RQPSSHVQILRRLGASPSMLSSG*LSPFCC
Trigger: GCAGCAGAATGGCGACAGCAAGCCCGAGCTCAACAT...GGAAGGAGAGGCCCCCAACCTCCTCAGGATTTGCACGTGTGAACTAGGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GGGGCGCAGAACGGGCTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCTGGATGGTGATCCAGTaGTCCAGGATCTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: GAQNGLCDFLVDTLQDPSWMVIQ*SRIFLF
Trigger: GAACAAGAAGATCCTGGACAACTGGATCACCATCCA...GGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAGCCCGTTCTGCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp CTCTGTGACTTCTTGGTGGACACCCTGCAGGACCCCTCCGTTCCTGCAGTCTTGACCAGCAGGGAGATGTaGGTGTTCTCTTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LCDFLVDTLQDPSVPAVLTSREM*VFSSWL
Trigger: GAGCCAGGAAGAGAACACCAACATCTCCCTGCTGGT...CAAGACTGCAGGAACGGAGGGGTCCTGCAGGGTGTCCACCAAGAAGTCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGTTGGCTGCAATGCTGTaGGGATTTACCTCTCCGACA +
Preference number: 5 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQLAAML*GFTSPT
Trigger: TGTCGGAGAGGTAAATCCCAACAGCATTGCAGCCAA...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGTCCTGCAGCATCACTTaGTACTGCTCCTCCGGTTTC +
Preference number: 5 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERSCSIT*YCSSGF
Trigger: GAAACCGGAGGAGCAGTACAAAGTGATGCTGCAGGA...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544474.5
CDS-3UTR CAA 90 bp TCAGTTCACTCAGAAGAGAAGCCCCTGCTCCAGATGGTGTGGGGCGCAGAACGGTTGGCTGCAATGCTGTaGGGATTTACCTCTCCGACA +
Preference number: 5 (lower is better)
Translates to: SVHSEEKPLLQMVWGAERLAAML*GFTSPT
Trigger: TGTCGGAGAGGTAAATCCCAACAGCATTGCAGCCAA...CCGTTCTGCGCCCCACACCATCTGGAGCAGGGGCTTCTCTTCTGAGTGAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp AGGCCGCGCTCAGCAGCGAAGCCGGACACTCTCTTGTGCTCCTTTCAGCTCAGCTTGTCCAGGATCTTCTaGTTCCGCTTCTTCATGGTT +
Preference number: 5 (lower is better)
Translates to: RPRSAAKPDTLLCSFQLSLSRIF*FRFFMV
Trigger: AACCATGAAGAAGCGGAACAAGAAGATCCTGGACAA...GCTGAGCTGAAAGGAGCACAAGAGAGTGTCCGGCTTCGCTGCTGAGCGCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGTGGATGGTGATCCAGTaGTCCAGGATCTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQWMVIQ*SRIFLF
Trigger: GAACAAGAAGATCCTGGACAACTGGATCACCATCCA...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp TTCAGAGCAGGTAGAGGAATGAGACAGACAAGGGATGCAAGAAGATTCAAGGAGGTGGGCGGACGCAGCTaGCCCAGCGCCATGATATGC +
Preference number: 5 (lower is better)
Translates to: FRAGRGMRQTRDARRFKEVGGRS*PSAMIC
Trigger: GCATATCATGGCGCTGGGCAAGCTGCGTCCGCCCAC...CTCCTTGAATCTTCTTGCATCCCTTGTCTGTCTCATTCCTCTACCTGCTCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR CAA 90 bp GAGACAGACAAGGGATGCAAGAAGATTCAAGGAGTGATGCTTGTGAGGCGGCAGACCATCAGGCCCAGCTaGTCCCGGTGGCTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: ETDKGCKKIQGVMLVRRQTIRPS*SRWLLL
Trigger: TAAAAGCAGCCACCGGGACAAGCTGGGCCTGATGGT...CTGCCGCCTCACAAGCATCACTCCTTGAATCTTCTTGCATCCCTTGTCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS-3UTR CAA 90 bp CAGGCCCAGCTTGTCCCGGTGGCTGCTTTTATACAGCTCCACCTCCTCATACTCTTGGCTGCAATGCTGTaGGGATTTACCTCTCCGACA +
Preference number: 5 (lower is better)
Translates to: QAQLVPVAAFIQLHLLILLAAML*GFTSPT
Trigger: TGTCGGAGAGGTAAATCCCAACAGCATTGCAGCCAA...GAGTATGAGGAGGTGGAGCTGTATAAAAGCAGCCACCGGGACAAGCTGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS CCA 90 bp CAGTTGTCCAGGATCTTCTTGTTCCGCTTCTTCATGGTTTTGCGGTaGCTCAGGGCAATGATGTTGAGCTCGGGCTTGCTGTCGCCATTC +
Preference number: 5 (lower is better)
Translates to: QLSRIFLFRFFMVLR*LRAMMLSSGLLSPF
Trigger: GAATGGCGACAGCAAGCCCGAGCTCAACATCATTGCCCTGAGCCACCGCAAAACCATGAAGAAGCGGAACAAGAAGATCCTGGACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS-3UTR CAA 90 bp CCCGAGGTCTTCCACTGCTGCTCATGGGGCTTGGTTTCTAGAGCCCTCACCATCTTGTCCAGGATCTTCTaGTTCCGCTTCTTCATGGTT +
Preference number: 5 (lower is better)
Translates to: PEVFHCCSWGLVSRALTILSRIF*FRFFMV
Trigger: AACCATGAAGAAGCGGAACAAGAAGATCCTGGACAA...GATGGTGAGGGCTCTAGAAACCAAGCCCCATGAGCAGCAGTGGAAGACCTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp GTGCACGTGCAAGCACACGCAAGAGCATGGGGGATGGGGAATGCACACGCACAGAAATCAGGGGTGCCTTaGTCTACAAATAACTGCAGT +
Preference number: 5 (lower is better)
Translates to: VHVQAHARAWGMGNAHAQKSGVP*STNNCS
Trigger: ACTGCAGTTATTTGTAGACAAAGGCACCCCTGATTT...CTGTGCGTGTGCATTCCCCATCCCCCATGCTCTTGCGTGTGCTTGCACGTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000164640.8
ENST00000544474.5
CDS-3UTR CAA 90 bp TGCAATGCTGTTGGGATTTACCTCTCCGACATAAATGCCCAGGTCCTCCTCGTCACCTGCAGCATCACTTaGTACTGCTCCTCCGGTTTC +
Preference number: 5 (lower is better)
Translates to: CNAVGIYLSDINAQVLLVTCSIT*YCSSGF
Trigger: GAAACCGGAGGAGCAGTACAAAGTGATGCTGCAGGT...GACGAGGAGGACCTGGGCATTTATGTCGGAGAGGTAAATCCCAACAGCATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480650.3
CDS TCA 72 bp GGAGGCGGAGGGCGGGAACGGGAAGACGCCTTTCACTaGCCCGGGCGCGGGACCTCGGGTCCCGGGCCGGGG +
Preference number: 6 (lower is better)
Translates to: GGGGREREDAFH*PGRGTSGPGPG
Trigger: CCCCGGCCCGGGACCCGAGGTCCCGCGCCCGGGTCAGTGAAAGGCGTCTTCCCGTTCCCGCCCTCCGCCTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000480418.5
ENST00000544474.5
CDS GCA 72 bp GTCTTGGGGTTGCGGCGGCCGCGCTCCTCCGCGTGCTaGCTCCGGCCGGCCTCAGGATCCCGGGAGAGGGAC +
Preference number: 6 (lower is better)
Translates to: VLGLRRPRSSAC*LRPASGSRERD
Trigger: GTCCCTCTCCCGGGATCCTGAGGCCGGCCGGAGGCAGCACGCGGAGGAGCGCGGCCGCCGCAACCCCAAGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 72 bp GGCCGGCCTCAGGATCCCGGGAGAGGGACCGGAACTTaGCGGGGCTCCCCGGTGGAGGAGCTGCCTTGGCGG +
Preference number: 6 (lower is better)
Translates to: GRPQDPGRGTGT*RGSPVEELPWR
Trigger: CCGCCAAGGCAGCTCCTCCACCGGGGAGCCCCGCCAAGTTCCGGTCCCTCTCCCGGGATCCTGAGGCCGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CAA 72 bp CGGCCGGCCTCAGGATCCCGGGAGAGGGACCGGAACTaGGCGGGGCTCCCCGGTGGAGGAGCTGCCTTGGCG +
Preference number: 6 (lower is better)
Translates to: RPASGSRERDRN*AGLPGGGAALA
Trigger: CGCCAAGGCAGCTCCTCCACCGGGGAGCCCCGCCAAGTTCCGGTCCCTCTCCCGGGATCCTGAGGCCGGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 72 bp GGGGGCAGCGGCTCGCCCCTCAGGTTAACTCTTCGCTaGCCGAGGCCAGGCGCGGGCATGCTCCCTCGCACC +
Preference number: 6 (lower is better)
Translates to: GGSGSPLRLTLR*PRPGAGMLPRT
Trigger: GGTGCGAGGGAGCATGCCCGCGCCTGGCCTCGGCCAGCGAAGAGTTAACCTGAGGGGCGAGCCGCTGCCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393758.7
ENST00000480418.5
ENST00000544474.5
CDS TCA 72 bp GCATGGCCATCTCGTGGCCCAGGCTCTCGTTGCGGTTaGCGTCCAGGGCGCTGTTGCCTCCGGAGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: AWPSRGPGSRCG*RPGRCCLRRPG
Trigger: CCCGGGCCTCCGGAGGCAACAGCGCCCTGGACGTCAACCGCAACGAGAGCCTGGGCCACGAGATGGCCATGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS GCA 72 bp CCCGGCTCTGCAGGGCGTCCCCTTGCAGGCCAAACTTaGGCAGGCTTCCCGGGGTGTTGGTGGAGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: PGSAGRPLAGQT*AGFPGCWWSSG
Trigger: CCCCGAGCTCCACCAACACCCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAGAGCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS TCA 72 bp CCTCGGCCAGCTCAGAGAGGACGTACGGCTCCAGGATaGCCATGGGCGGGGTGGGCGGACGCAGCTTGCCCA +
Preference number: 6 (lower is better)
Translates to: PRPAQRGRTAPG*PWAGWADAACP
Trigger: TGGGCAAGCTGCGTCCGCCCACCCCGCCCATGGTCATCCTGGAGCCGTACGTCCTCTCTGAGCTGGCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468491.1
ENST00000480650.3
ENST00000483693.5
CDS CAA 72 bp AGCATGGCCATCTCGTGGCCCAGGCTCTCGTTGCGGTaGACGTCCAGGGCGCTGTTGCCTCCGGAGGCCCGG +
Preference number: 6 (lower is better)
Translates to: SMAISWPRLSLR*TSRALLPPEAR
Trigger: CCGGGCCTCCGGAGGCAACAGCGCCCTGGACGTCAACCGCAACGAGAGCCTGGGCCACGAGATGGCCATGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CAA 90 bp TCCTCCTCCAGCATGGCCATCTCGTGGCCCAGGCTCTCGTTGCGGTaGACGTCCAGGGCGCTGTTGCCTCCGGAGGCCCGGGGAAAGAGG +
Preference number: 6 (lower is better)
Translates to: SSSSMAISWPRLSLR*TSRALLPPEARGKR
Trigger: CCTCTTTCCCCGGGCCTCCGGAGGCAACAGCGCCCTGGACGTCAACCGCAACGAGAGCCTGGGCCACGAGATGGCCATGCTGGAGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS TCA 72 bp GGGGGCTCCCCGCAGCCCGGGCTAAGATTAGCAGAATaGGGCAGCGCTCACGCGGTCATGAGCCACCAGGCC +
Preference number: 6 (lower is better)
Translates to: GGSPQPGLRLAE*GSAHAVMSHQA
Trigger: GGCCTGGTGGCTCATGACCGCGTGAGCGCTGCCTCATTCTGCTAATCTTAGCCCGGGCTGCGGGGAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484792.5
CDS CCA 72 bp CCCGCCCCCTCGGCCAGCAGAGAGTCCATGCTGAAATaGAAGTCCCGGCTCTGCAGGGCGTCCCCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: PAPSASRESMLK*KSRLCRASPCR
Trigger: CCTGCAAGGGGACGCCCTGCAGAGCCGGGACTTCCATTTCAGCATGGACTCTCTGCTGGCCGAGGGGGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS TCA 72 bp GAGGCGGCAGAGGAGAGAGGATGGAGGAGGAGGAGCTaGGGCCCTCAACCCTGGCACTTCCGGCAGCGACGT +
Preference number: 6 (lower is better)
Translates to: EAAEERGWRRRS*GPQPWHFRQRR
Trigger: ACGTCGCTGCCGGAAGTGCCAGGGTTGAGGGCCTCAGCTCCTCCTCCTCCATCCTCTCTCCTCTGCCGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468491.1
ENST00000480650.3
ENST00000483693.5
ENST00000484792.5
CDS GCA 72 bp CCAGCAGGTCGTGCTCAGAGCTCTCTTCGTTCCGGGTaGTCTCGTCAGTCCGGCCCACCCCGCTGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PAGRAQSSLRSG*SRQSGPPRCPA
Trigger: AGCTGGACAGCGGGGTGGGCCGGACTGACGAGAGCACCCGGAACGAAGAGAGCTCTGAGCACGACCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 72 bp CGGGCAGCTCGGAGATGTCGGACAGCTCGTGCTTCTTaGGCTCGCTGGCCGCCAGGTCGTAGAGGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: RAARRCRTARAS*ARWPPGRRGSP
Trigger: AGGAGAGCCTCTACGACCTGGCGGCCAGCGAGCCCAAGAAGCACGAGCTGTCCGACATCTCCGAGCTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS TCA 72 bp CCGTGTACCCGCCCGGGCAGCTCACACGGTGGTGACTaGGAGAAGAGGGTTGTAGACCCGCTTGCCATCGGC +
Preference number: 6 (lower is better)
Translates to: PCTRPGSSHGGD*EKRVVDPLAIG
Trigger: GCCGATGGCAAGCGGGTCTACAACCCTCTTCTCTCAGTCACCACCGTGTGAGCTGCCCGGGCGGGTACACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 72 bp CGGAGATGTCGGACAGCTCGTGCTTCTTGGGCTCGCTaGCCGCCAGGTCGTAGAGGCTCTCCTCCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: RRCRTARASWAR*PPGRRGSPPPA
Trigger: TGCTGGAGGAGGAGAGCCTCTACGACCTGGCGGCCAGCGAGCCCAAGAAGCACGAGCTGTCCGACATCTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS TCA 72 bp TGGGCCGTGTACCCGCCCGGGCAGCTCACACGGTGGTaGCTGAGAGAAGAGGGTTGTAGACCCGCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: WAVYPPGQLTRW*LREEGCRPACH
Trigger: ATGGCAAGCGGGTCTACAACCCTCTTCTCTCAGTCACCACCGTGTGAGCTGCCCGGGCGGGTACACGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS GCA 72 bp CCGGTTTCTGGACCACGCACATATTACATCCCATGTTaGTGGCCGGCGAGAGGAGGCGGAGGGCGGGAACGG +
Preference number: 6 (lower is better)
Translates to: PVSGPRTYYIPC*WPARGGGGRER
Trigger: CCGTTCCCGCCCTCCGCCTCCTCTCGCCGGCCAGCAACATGGGATGTAATATGTGCGTGGTCCAGAAACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000480418.5
ENST00000480650.3
ENST00000544474.5
CDS GCA 72 bp CTGAAATGGAAGTCCCGGCTCTGCAGGGCGTCCCCTTaGAGGCCAAACTTGCGCAGGCTTCCCGGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: LKWKSRLCRASP*RPNLRRLPGVL
Trigger: CAACACCCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAGAGCCGGGACTTCCATTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS GCA 72 bp TCCAGCAGCCAGGCCTTCATGCAGCGCTCACGCAGCTaGTGCATCTTCTGCGCCCGCAGTATGTTGCGGCAC +
Preference number: 6 (lower is better)
Translates to: SSSQAFMQRSRS*CIFCARSMLRH
Trigger: GTGCCGCAACATACTGCGGGCGCAGAAGATGCAGCAGCTGCGTGAGCGCTGCATGAAGGCCTGGCTGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 72 bp CGGGCCACCAGCAGGGAGATGTTGGTGTTCTCTTCCTaGCTCAGGATGGCCACCGCCTCTTCCCGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: RATSREMLVFSS*LRMATASSRFW
Trigger: CCAGAACCGGGAAGAGGCGGTGGCCATCCTGAGCCAGGAAGAGAACACCAACATCTCCCTGCTGGTGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000475140.5
ENST00000484792.5
ENST00000544474.5
CDS CAA 72 bp GCTGAAATGGAAGTCCCGGCTCTGCAGGGCGTCCCCTaGCAGGCCAAACTTGCGCAGGCTTCCCGGGGTGTT +
Preference number: 6 (lower is better)
Translates to: AEMEVPALQGVP*QAKLAQASRGV
Trigger: AACACCCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAGAGCCGGGACTTCCATTTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CAA 90 bp TACTGCTCCTCCGGTTTCTGGACCACGCACATATTACATCCCATGTaGCTGGCCGGCGAGAGGAGGCGGAGGGCGGGAACGGGAAGACGC +
Preference number: 6 (lower is better)
Translates to: YCSSGFWTTHILHPM*LAGERRRRAGTGRR
Trigger: GCGTCTTCCCGTTCCCGCCCTCCGCCTCCTCTCGCCGGCCAGCAACATGGGATGTAATATGTGCGTGGTCCAGAAACCGGAGGAGCAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000480418.5
ENST00000480650.3
ENST00000544474.5
CDS CAA 90 bp AGAGTCCATGCTGAAATGGAAGTCCCGGCTCTGCAGGGCGTCCCCTaGCAGGCCAAACTTGCGCAGGCTTCCCGGGGTGTTGGTGGAGCT +
Preference number: 6 (lower is better)
Translates to: RVHAEMEVPALQGVP*QAKLAQASRGVGGA
Trigger: AGCTCCACCAACACCCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAGAGCCGGGACTTCCATTTCAGCATGGACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS GCA 72 bp AGCAGCCAGGCCTTCATGCAGCGCTCACGCAGCTGCTaGATCTTCTGCGCCCGCAGTATGTTGCGGCACTTG +
Preference number: 6 (lower is better)
Translates to: SSQAFMQRSRSC*IFCARSMLRHL
Trigger: CAAGTGCCGCAACATACTGCGGGCGCAGAAGATGCAGCAGCTGCGTGAGCGCTGCATGAAGGCCTGGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS GCA 72 bp GCAATGATGTTGAGCTCGGGCTTGCTGTCGCCATTCTaGTGCTCCCGCAGGCACTCCAGCCGGCTCTGCATC +
Preference number: 6 (lower is better)
Translates to: AMMLSSGLLSPF*CSRRHSSRLCI
Trigger: GATGCAGAGCCGGCTGGAGTGCCTGCGGGAGCAGCAGAATGGCGACAGCAAGCCCGAGCTCAACATCATTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 72 bp GCTGACTCTCAGGTCGGGCCACCAGCAGGGAGATGTTaGTGTTCTCTTCCTGGCTCAGGATGGCCACCGCCT +
Preference number: 6 (lower is better)
Translates to: ADSQVGPPAGRC*CSLPGSGWPPP
Trigger: AGGCGGTGGCCATCCTGAGCCAGGAAGAGAACACCAACATCTCCCTGCTGGTGGCCCGACCTGAGAGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000475140.5
ENST00000484792.5
ENST00000544474.5
CDS CAA 72 bp TCCGGTTTCTGGACCACGCACATATTACATCCCATGTaGCTGGCCGGCGAGAGGAGGCGGAGGGCGGGAACG +
Preference number: 6 (lower is better)
Translates to: SGFWTTHILHPM*LAGERRRRAGT
Trigger: CGTTCCCGCCCTCCGCCTCCTCTCGCCGGCCAGCAACATGGGATGTAATATGTGCGTGGTCCAGAAACCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000480418.5
ENST00000480650.3
ENST00000544474.5
CDS CAA 72 bp TTGCGGTGGCTCAGGGCAATGATGTTGAGCTCGGGCTaGCTGTCGCCATTCTGCTGCTCCCGCAGGCACTCC +
Preference number: 6 (lower is better)
Translates to: LRWLRAMMLSSG*LSPFCCSRRHS
Trigger: GGAGTGCCTGCGGGAGCAGCAGAATGGCGACAGCAAGCCCGAGCTCAACATCATTGCCCTGAGCCACCGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CAA 90 bp TTCATGGTTTTGCGGTGGCTCAGGGCAATGATGTTGAGCTCGGGCTaGCTGTCGCCATTCTGCTGCTCCCGCAGGCACTCCAGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: FMVLRWLRAMMLSSG*LSPFCCSRRHSSRL
Trigger: GAGCCGGCTGGAGTGCCTGCGGGAGCAGCAGAATGGCGACAGCAAGCCCGAGCTCAACATCATTGCCCTGAGCCACCGCAAAACCATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS TCA 72 bp TCCTTGGAGGAGCGCAGGGCCTGCAGAGTTTGCTCCTaGGACAGCTTGGAGAGCTCCTTCCCGTTCACCTGC +
Preference number: 6 (lower is better)
Translates to: SLEERRACRVCS*DSLESSFPFTC
Trigger: GCAGGTGAACGGGAAGGAGCTCTCCAAGCTGTCTCAGGAGCAAACTCTGCAGGCCCTGCGCTCCTCCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000480650.3
CDS TCA 72 bp TCCTTGGAGGAGCGCAGGGCCTGCAGAGTTTGCTCCTaGGACAGCTTGGAGAGCTCCTTCCCGTTCACCCGA +
Preference number: 6 (lower is better)
Translates to: SLEERRACRVCS*DSLESSFPFTR
Trigger: TCGGGTGAACGGGAAGGAGCTCTCCAAGCTGTCTCAGGAGCAAACTCTGCAGGCCCTGCGCTCCTCCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475140.5
CDS GCA 72 bp AGCAGAGAGTCCATGCTGAAATGGAAGTCCCGGCTCTaGAGGGCGTCCCCTTGCAGGCCAAACTTGCGCAGG +
Preference number: 6 (lower is better)
Translates to: SRESMLKWKSRL*RASPCRPNLRR
Trigger: CCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAGAGCCGGGACTTCCATTTCAGCATGGACTCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS GCA 72 bp ATGATGTTGAGCTCGGGCTTGCTGTCGCCATTCTGCTaGTCCCGCAGGCACTCCAGCCGGCTCTGCATCATG +
Preference number: 6 (lower is better)
Translates to: MMLSSGLLSPFC*SRRHSSRLCIM
Trigger: CATGATGCAGAGCCGGCTGGAGTGCCTGCGGGAGCAGCAGAATGGCGACAGCAAGCCCGAGCTCAACATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 72 bp GTTTCTGGACCACGCACATATTACATCCCATGTTGCTaGCCGGCGAGAGGAGGCGGAGGGCGGGAACGGGAA +
Preference number: 6 (lower is better)
Translates to: VSGPRTYYIPCC*PARGGGGRERE
Trigger: TTCCCGTTCCCGCCCTCCGCCTCCTCTCGCCGGCCAGCAACATGGGATGTAATATGTGCGTGGTCCAGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000480418.5
ENST00000480650.3
ENST00000544474.5
CDS TCA 72 bp TCCTTGGAGGAGCGCAGGGCCTGCAGAGTTTGCTCCTaGGACAGCTTGGAGAGCTCCTTCCCGTTCACCTTG +
Preference number: 6 (lower is better)
Translates to: SLEERRACRVCS*DSLESSFPFTL
Trigger: CAAGGTGAACGGGAAGGAGCTCTCCAAGCTGTCTCAGGAGCAAACTCTGCAGGCCCTGCGCTCCTCCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483693.5
CDS GCA 72 bp TGCGCCCGCAGTATGTTGCGGCACTTGAATTCCAGGTaGCTTAGCTCCTCCTCCAGCATGGCCATCTCGTGG +
Preference number: 6 (lower is better)
Translates to: CARSMLRHLNSR*LSSSSSMAISW
Trigger: CCACGAGATGGCCATGCTGGAGGAGGAGCTAAGGCACCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CCA 72 bp GCAGGGAGATGTTGGTGTTCTCTTCCTGGCTCAGGATaGCCACCGCCTCTTCCCGGTTCTGGACGTCTACAC +
Preference number: 6 (lower is better)
Translates to: AGRCWCSLPGSG*PPPLPGSGRLH
Trigger: GTGTAGACGTCCAGAACCGGGAAGAGGCGGTGGCCATCCTGAGCCAGGAAGAGAACACCAACATCTCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000475140.5
ENST00000484792.5
ENST00000544474.5
CDS CAA 90 bp TCACGCAGCTGCTGCATCTTCTGCGCCCGCAGTATGTTGCGGCACTaGAATTCCAGGTGCCTTAGCTCCTCCTCCAGCATGGCCATCTCG +
Preference number: 6 (lower is better)
Translates to: SRSCCIFCARSMLRH*NSRCLSSSSSMAIS
Trigger: CGAGATGGCCATGCTGGAGGAGGAGCTAAGGCACCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCAGAAGATGCAGCAGCTGCGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CAA 90 bp ATGCAGCGCTCACGCAGCTGCTGCATCTTCTGCGCCCGCAGTATGTaGCGGCACTTGAATTCCAGGTGCCTTAGCTCCTCCTCCAGCATG +
Preference number: 6 (lower is better)
Translates to: MQRSRSCCIFCARSM*RHLNSRCLSSSSSM
Trigger: CATGCTGGAGGAGGAGCTAAGGCACCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCAGAAGATGCAGCAGCTGCGTGAGCGCTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CAA 90 bp TTGTTCCGCTTCTTCATGGTTTTGCGGTGGCTCAGGGCAATGATGTaGAGCTCGGGCTTGCTGTCGCCATTCTGCTGCTCCCGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: LFRFFMVLRWLRAMM*SSGLLSPFCCSRRH
Trigger: GTGCCTGCGGGAGCAGCAGAATGGCGACAGCAAGCCCGAGCTCAACATCATTGCCCTGAGCCACCGCAAAACCATGAAGAAGCGGAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS TCA 72 bp CTTCTCCTCTTCGTTTCCGGGCTGCTGGGCAGGGGGTaGTTTCAGTTTACGAGCACGCAGCTCCCCCTCATT +
Preference number: 6 (lower is better)
Translates to: LLLFVSGLLGRG*FQFTSTQLPLI
Trigger: AATGAGGGGGAGCTGCGTGCTCGTAAACTGAAATCACCCCCTGCCCAGCAGCCCGGAAACGAAGAGGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000484792.5
ENST00000544474.5
CDS CCA 72 bp TCCTGGCTCAGGATGGCCACCGCCTCTTCCCGGTTCTaGACGTCTACACCGTTAATCTGGATGATGCGGTCT +
Preference number: 6 (lower is better)
Translates to: SWLRMATASSRF*TSTPLIWMMRS
Trigger: AGACCGCATCATCCAGATTAACGGTGTAGACGTCCAGAACCGGGAAGAGGCGGTGGCCATCCTGAGCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000475140.5
ENST00000483693.5
ENST00000484792.5
ENST00000544474.5
CDS CAA 72 bp TCACGCAGCTGCTGCATCTTCTGCGCCCGCAGTATGTaGCGGCACTTGAATTCCAGGTGCCTTAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SRSCCIFCARSM*RHLNSRCLSSS
Trigger: GGAGGAGCTAAGGCACCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCAGAAGATGCAGCAGCTGCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CAA 72 bp TGCTGCATCTTCTGCGCCCGCAGTATGTTGCGGCACTaGAATTCCAGGTGCCTTAGCTCCTCCTCCAGCATG +
Preference number: 6 (lower is better)
Translates to: CCIFCARSMLRH*NSRCLSSSSSM
Trigger: CATGCTGGAGGAGGAGCTAAGGCACCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCAGAAGATGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS CAA 72 bp TTCTTCATGGTTTTGCGGTGGCTCAGGGCAATGATGTaGAGCTCGGGCTTGCTGTCGCCATTCTGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: FFMVLRWLRAMM*SSGLLSPFCCS
Trigger: GGAGCAGCAGAATGGCGACAGCAAGCCCGAGCTCAACATCATTGCCCTGAGCCACCGCAAAACCATGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000544474.5
CDS GCA 72 bp AGCTCCTTCCCGTTCACCTGCAGCATCACTTTGTACTaGTCCTCCGGTTTCTGGACCACGCACATATTACAT +
Preference number: 6 (lower is better)
Translates to: SSFPFTCSITLY*SSGFWTTHILH
Trigger: ATGTAATATGTGCGTGGTCCAGAAACCGGAGGAGCAGTACAAAGTGATGCTGCAGGTGAACGGGAAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000164640.8
ENST00000393758.7
ENST00000480650.3