RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDZD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000172367

Ensembl transcript IDs: ENST00000322712.4, ENST00000355547.10, ENST00000525131.5, ENST00000526279.5, ENST00000526836.1, ENST00000527028.5, ENST00000527308.5, ENST00000527951.5, ENST00000528730.1, ENST00000529098.5, ENST00000529573.1, ENST00000531114.5, ENST00000533688.5, ENST00000534790.5

Found 421 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCAGGTGGGCCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTaGTCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCA +
Preference number: 1 (lower is better)
Translates to: GRWACRKGGSTWASL*SVVSESLWSGLERA
Trigger: TGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGGCCCACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
3UTR CCA 90 bp TGCAGCCAGGGGCAATCCCAGCTGGCGACACTGTTCTTCCACCTCTaGCCCTGCCACCAGCAAGGTCACCTGCTGTCCACTCTGCCAAAG +
Preference number: 1 (lower is better)
Translates to: CSQGQSQLATLFFHL*PCHQQGHLLSTLPK
Trigger: CTTTGGCAGAGTGGACAGCAGGTGACCTTGCTGGTGGCAGGGCCAGAGGTGGAAGAACAGTGTCGCCAGCTGGGATTGCCCCTGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
3UTR TCA 90 bp CAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTaGGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCA +
Preference number: 1 (lower is better)
Translates to: QEGREHLGQPVIGGV*VPLVWLRESILPSP
Trigger: TGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
3UTR CCA 90 bp CCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCAGGCATAGCTaGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATA +
Preference number: 1 (lower is better)
Translates to: PPSRNAKAPTEGRHS*SPNFCITLKGPGVI
Trigger: TATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR GCA 90 bp ACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAATaGAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCC +
Preference number: 1 (lower is better)
Translates to: TQAVRFMANGHFYNK*NGDQAPPSRNAKAP
Trigger: GGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR GCA 90 bp GCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTaGATTACACTCAAGGGTCCTGGAGTCATATCTAGAAAAGGTCCA +
Preference number: 1 (lower is better)
Translates to: AKAPTEGRHSWSPNF*ITLKGPGVISRKGP
Trigger: TGGACCTTTTCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR CCA 90 bp ACTGCCCCTTACCCCCACCAACACAAACACAGGCAGTCAGATTTATaGCGAATGGCCATTTCTATAACAAATGCAACGGTGACCAAGCAC +
Preference number: 1 (lower is better)
Translates to: TAPYPHQHKHRQSDL*RMAISITNATVTKH
Trigger: GTGCTTGGTCACCGTTGCATTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGGTGGGGGTAAGGGGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR CCA 90 bp TCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTAACCACACCCTCTGCTaGCAGGTGGGCCTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: SPAGAASHPLSLRPFWSLNHTLC*QVGLQE
Trigger: TTCCTGCAGGCCCACCTGCCAGCAGAGGGTGTGGTT...AAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR TCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTAGACACGGTAGCCCCTaGGTATGTCTGTACCAAGCA +
Preference number: 2 (lower is better)
Translates to: PAGREGAPGPACDRWCLSRHGSP*VCLYQA
Trigger: TGCTTGGTACAGACATACTCAGGGGCTACCGTGTCT...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
3UTR-3UTR CCA 90 bp TCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTGTGTCTGAGTCCCTCTaGTCTGGCTTAGAGAGAGCA +
Preference number: 2 (lower is better)
Translates to: SPAGAASHPLSLRPFWSLVSESL*SGLERA
Trigger: TGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC...AAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR CCA 90 bp CCTCTCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCATATGACATCCTCTaGAGCCTCAGACTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: PLSCRSRIPPLEPEALLVPYDIL*SLRLLQ
Trigger: CTGAAGGAGTCTGAGGCTCCAGAGGATGTCATATGG...GACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR CCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCCCATATGACATCCTCTaGAGCCTCAGACTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: AASHPLSLRPFWSLHTTAPYDIL*SLRLLQ
Trigger: CTGAAGGAGTCTGAGGCTCCAGAGGATGTCATATGG...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR TCA 90 bp CTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACACCTGGGCCAGCCTGTaGTCGGTGGTGTCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: LRHPQRAGIAGLQIFALHTWASL*SVVSES
Trigger: GGACTCAGACACCACCGATCACAGGCTGGCCCAGGT...GTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR GCA 90 bp CCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCTCCAACCACACCCTCTaGTGGCAGGTGGGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: PQRAGIAGLQIFALHSRVSNHTL*WQVGLQ
Trigger: CTGCAGGCCCACCTGCCAGCAGAGGGTGTGGTTGGA...GACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR CCA 90 bp AACCTCTCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGGAGGGCAGGCATAGCTaGTCTCCAAATTTTTGCATT +
Preference number: 2 (lower is better)
Translates to: NLSPAGAASHPLSLRPFWEGRHS*SPNFCI
Trigger: AATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTC...CCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGAGAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR GCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCTGGTCTCCAAATTTTTaGATTACACTCAAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: AASHPLSLRPFWSLHTTAWSPNF*ITLKGP
Trigger: AGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCA...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR TCA 90 bp ATTTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCTTCAGGGACCTGTCTaGGGCCTCCAACCACACCCT +
Preference number: 2 (lower is better)
Translates to: ISITNATVTKHHPPAMLRLQGPV*GLQPHP
Trigger: AGGGTGTGGTTGGAGGCCTCAGACAGGTCCCTGAAG...CCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR GCA 90 bp GCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCATGGTCTCCAAATTTTTaGATTACACTCAAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: ATVTKHHPPAMLRHPQRAWSPNF*ITLKGP
Trigger: AGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCA...TGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR GCA 90 bp AACCTCTCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGCATTTCTATAACAAATaGAACGGTGACCAAGCACCA +
Preference number: 2 (lower is better)
Translates to: NLSPAGAASHPLSLRPFWHFYNK*NGDQAP
Trigger: TGGTGCTTGGTCACCGTTGCATTTGTTATAGAAATG...CCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGAGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR CCA 90 bp CCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCCAGCCTGTGATCGGTaGTGTCTGAGTCCCTCTGGT +
Preference number: 2 (lower is better)
Translates to: PQRAGIAGLQIFALHSRVPACDR*CLSPSG
Trigger: ACCAGAGGGACTCAGACACCACCGATCACAGGCTGG...GACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR GCA 90 bp GAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCTTAGAGAGAGCATCCTaGCTTCACCACCTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: ESYLEKVQMASILARPTALERAS*LHHLRL
Trigger: CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAA...GGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR CCA 90 bp TGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCCCAGCCTGTGATCGGTaGTGTCTGAGTCCCTCTGGT +
Preference number: 2 (lower is better)
Translates to: CITLKGPGVISRKGPDGFPACDR*CLSPSG
Trigger: ACCAGAGGGACTCAGACACCACCGATCACAGGCTGG...GAAGCCATCTGGACCTTTTCTAGATATGACTCCAGGACCCTTGAGTGTAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR TCA 90 bp CTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAAGACACGGTAGCCCCTaGGTATGTCTGTACCAAGCA +
Preference number: 2 (lower is better)
Translates to: LESYLEKVQMASILARPTRHGSP*VCLYQA
Trigger: TGCTTGGTACAGACATACTCAGGGGCTACCGTGTCT...TGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR GCA 90 bp CTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACATTAGAGAGAGCATCCTaGCTTCACCACCTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: LESYLEKVQMASILARPTLERAS*LHHLRL
Trigger: CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAA...TGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR CCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCCCATATGACATCCTCTaGAGCCTCAGACTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLPYDIL*SLRLLQ
Trigger: CTGAAGGAGTCTGAGGCTCCAGAGGATGTCATATGG...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR TCA 90 bp CCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCTCTAAAACTCCCATATaGCATCCTCTGGAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: PQRAGIAGLQIFALHSRVSKTPI*HPLEPQ
Trigger: CTGAGGCTCCAGAGGATGTCATATGGGAGTTTTAGA...GACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR TCA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAAGTGATCGGTGGTGTCTaGGTCCCTCTGGTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKVIGGV*VPLVWL
Trigger: AAGCCAGACCAGAGGGACTCAGACACCACCGATCAC...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR TCA 90 bp ATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGTGATCGGTGGTGTCTaGGTCCCTCTGGTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: IAGLQIFALHSRVLESYLVIGGV*VPLVWL
Trigger: AAGCCAGACCAGAGGGACTCAGACACCACCGATCAC...TAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR-3UTR CCA 90 bp ATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGTGTCTGAGTCCCTCTaGTCTGGCTTAGAGAGAGCA +
Preference number: 2 (lower is better)
Translates to: IAGLQIFALHSRVLESYLVSESL*SGLERA
Trigger: TGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC...TAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR TCA 72 bp AGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTaGGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTG +
Preference number: 3 (lower is better)
Translates to: REHLGQPVIGGV*VPLVWLRESIL
Trigger: CAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
3UTR-3UTR CAA 90 bp GGGCAATCCCAGCTGGCGACACTGTTCTTCCACCTCTGGCCCTGCCACCAGCAAAAGCTTCCTGGTGAGTaGGTTGTGAGTGAACTTCTC +
Preference number: 3 (lower is better)
Translates to: GQSQLATLFFHLWPCHQQKLPGE*VVSELL
Trigger: GAGAAGTTCACTCACAACCAACTCACCAGGAAGCTT...TTGCTGGTGGCAGGGCCAGAGGTGGAAGAACAGTGTCGCCAGCTGGGATTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
3UTR TCA 72 bp TGTCCACTCTGCCAAAGCTTCCTGGTGAGTTGGTTGTaGGTGAACTTCTCCACACTGACCCCATTCACTTCC +
Preference number: 3 (lower is better)
Translates to: CPLCQSFLVSWL*VNFSTLTPFTS
Trigger: GGAAGTGAATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGGAAGCTTTGGCAGAGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
3UTR CCA 72 bp CGCAATGCTAAGGCACCCACAGAGGGCAGGCATAGCTaGTCTCCAAATTTTTGCATTACACTCAAGGGTCCT +
Preference number: 3 (lower is better)
Translates to: RNAKAPTEGRHS*SPNFCITLKGP
Trigger: AGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR GCA 72 bp CCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTaGATTACACTCAAGGGTCCTGGAGTCATATCTAGA +
Preference number: 3 (lower is better)
Translates to: PTEGRHSWSPNF*ITLKGPGVISR
Trigger: TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR GCA 72 bp GTCAGATTTATGGCGAATGGCCATTTCTATAACAAATaGAACGGTGACCAAGCACCACCCTCCCGCAATGCT +
Preference number: 3 (lower is better)
Translates to: VRFMANGHFYNK*NGDQAPPSRNA
Trigger: AGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAAATGGCCATTCGCCATAAATCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
3UTR CCA 72 bp TACCCCCACCAACACAAACACAGGCAGTCAGATTTATaGCGAATGGCCATTTCTATAACAAATGCAACGGTG +
Preference number: 3 (lower is better)
Translates to: YPHQHKHRQSDL*RMAISITNATV
Trigger: CACCGTTGCATTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGGTGGGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCGGCAGCGGGGCTTGGTaGGCAGTGCCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGREGAPGPACDRWCLSPGSGAW*AVPSPL
Trigger: CAGAGGGCTGGGCACTGCCCACCAAGCCCCGCTGCC...GGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCGCAACACCCGAGGGCTaGTGGCCCGGATGCGGCGTA +
Preference number: 4 (lower is better)
Translates to: AGREGAPGPACDRWCLSPATPEG*WPGCGV
Trigger: TACGCCGCATCCGGGCCAGCAGCCCTCGGGTGTTGC...GGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCACAGTGCCCAGCCCTCTaGCAGGGGTGCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ATVTKHHPPAMLRHPQRAQCPAL*QGCSQG
Trigger: CCCCTGGCTGCACCCCTGGCAGAGGGCTGGGCACTG...TGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTACCCTGCACACCACATaGCCAGCCCTGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSTLHTT*PALPSS
Trigger: GGAGCTGGGCAGGGCTGGGCATGTGGTGTGCAGGGT...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCAGCCCTCTGCCAGGGGTaGAGCCAGGGGCAATCCCAG +
Preference number: 4 (lower is better)
Translates to: ATVTKHHPPAMLRHPQRAALCQG*SQGQSQ
Trigger: CTGGGATTGCCCCTGGCTGCACCCCTGGCAGAGGGC...TGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGTGAGGCTGAGCTGCTaGCCCGGGGCGAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: VPLVWLRESILPSPPQAGVRLSC*PGARRE
Trigger: CTCCCGCCTCGCCCCGGGGCAGCAGCTCAGCCTCAC...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCGCAGAGACCTGGCTaGCAGCTTCAGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSPQRPG*QLQAEG
Trigger: CCCCTCTGCCTGAAGCTGGCAGCCAGGTCTCTGCGG...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTCCCAGCCTTCTTGGCTaGCAGTCCCGGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GAPGPACDRWCLSPSGLAPSLLG*QSRVHL
Trigger: GAGGTGGACCCGGGACTGCCAGCCAAGAAGGCTGGG...AGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCAGGGTCGACGACAGTaGGGGAGACACAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSQGRRQ*GRHRSP
Trigger: AGGGCTCCTGTGTCTCCCTCACTGTCGTCGACCCTG...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp AACCTCTCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTGCCTGGGTCCACCCTaGACACCACATGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: NLSPAGAASHPLSLRPFWCLGPP*TPHAQP
Trigger: GGGCTGGGCATGTGGTGTGCAGGGTGGACCCAGGCA...CCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGAGAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGCAGTGCCCAGCCCTCTaGCAGGGGTGCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLEQCPAL*QGCSQG
Trigger: CCCCTGGCTGCACCCCTGGCAGAGGGCTGGGCACTG...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp AGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGGTGAGGCTGAGCTGCTaGCCCGGGGCGAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: RLESEDTVAPEYVCTKQGVRLSC*PGARRE
Trigger: CTCCCGCCTCGCCCCGGGGCAGCAGCTCAGCCTCAC...CCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCGTGAGGCTGAGCTGCTaGCCCGGGGCGAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTVRLSC*PGARRE
Trigger: CTCCCGCCTCGCCCCGGGGCAGCAGCTCAGCCTCAC...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCCAGTGAGGCTGAGCTaGTGCCCCGGGGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHPVRLS*CPGARR
Trigger: CCGCCTCGCCCCGGGGCAGCAGCTCAGCCTCACTGG...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTCAGAGCCCAGTCCTCTaGAGCCCCAGGGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: GAPGPACDRWCLSPSGLAQSPVL*SPRGNP
Trigger: TGGATTCCCCCTGGGGCTGCAGAGGACTGGGCTCTG...AGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCCAGAGCCCAGTCCTCTaGAGCCCCAGGGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: AASHPLSLRPFWSLHTTAQSPVL*SPRGNP
Trigger: TGGATTCCCCCTGGGGCTGCAGAGGACTGGGCTCTG...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTCCAACCACACCCTCTaGTGGCAGGTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GAPGPACDRWCLSPSGLASNHTL*WQVGLQ
Trigger: CTGCAGGCCCACCTGCCAGCAGAGGGTGTGGTTGGA...AGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCACTGGGCAGAGGTGCCTaGGTCCACCCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: ATVTKHHPPAMLRHPQRALGRGA*VHPAHH
Trigger: GTGGTGTGCAGGGTGGACCCAGGCACCTCTGCCCAG...TGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GGGCAATCCCAGCTGGCGACACTGTTCTTCCACCTCTGGCCCTGCCACCAGCAACTGGGCAGAGGTGCCTaGGTCCACCCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: GQSQLATLFFHLWPCHQQLGRGA*VHPAHH
Trigger: GTGGTGTGCAGGGTGGACCCAGGCACCTCTGCCCAG...TTGCTGGTGGCAGGGCCAGAGGTGGAAGAACAGTGTCGCCAGCTGGGATTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR CCA 90 bp GAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGCAGGCAGCGGGGCTTaGTGGGCAGTGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ESLWSGLERASCLHHLRLAGSGA*WAVPSP
Trigger: AGGGCTGGGCACTGCCCACCAAGCCCCGCTGCCTGC...CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTGACACTGTCTCCTCATaGCCCAGCCCCTCCACGCTC +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSDTVSS*PSPSTL
Trigger: GAGCGTGGAGGGGCTGGGCCATGAGGAGACAGTGTC...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCACAGGCGAACCATGCTaGAGAAGCGGTCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: AASHPLSLRPFWSLHTTATGEPC*RSGPPQ
Trigger: CTGAGGCGGACCGCTTCTTCAGCATGGTTCGCCTGT...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp GCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCGTGATCGGTGGTGTCTaGGTCCCTCTGGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: AGREGAPGPACDRWCLSPVIGGV*VPLVWL
Trigger: AAGCCAGACCAGAGGGACTCAGACACCACCGATCAC...GGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp AACCTCTCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGACCTGGGCCAGCCTGTaGTCGGTGGTGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: NLSPAGAASHPLSLRPFWTWASL*SVVSES
Trigger: GGACTCAGACACCACCGATCACAGGCTGGCCCAGGT...CCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGAGAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGAGGCCCTCTGCCAGGGGTaGAGCCAGGGGCAATCCCAG +
Preference number: 4 (lower is better)
Translates to: PLVWLRESILPSPPQAGEALCQG*SQGQSQ
Trigger: CTGGGATTGCCCCTGGCTGCACCCCTGGCAGAGGGC...CTCTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp AGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGCAGTGCCCAGCCCTCTaGCAGGGGTGCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RLESEDTVAPEYVCTKQGQCPAL*QGCSQG
Trigger: CCCCTGGCTGCACCCCTGGCAGAGGGCTGGGCACTG...CCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp AACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACACCAGTGAGGCTGAGCTaGTGCCCCGGGGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: NKCNGDQAPPSRNAKAPTPVRLS*CPGARR
Trigger: CCGCCTCGCCCCGGGGCAGCAGCTCAGCCTCACTGG...TGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTGTCGGAAGCCATAGCTaGCACCAGGCCCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSVGSHS*HQAQGT
Trigger: TGTACCCTGGGCCTGGTGGCAGCTATGGCTTCCGAC...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGACACCCGAGGGCTGCTaGCCCGGATGCGGCGTACCA +
Preference number: 4 (lower is better)
Translates to: ESLWSGLERASCLHHLRLTPEGC*PGCGVP
Trigger: TGGTACGCCGCATCCGGGCCAGCAGCCCTCGGGTGT...CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCGGCAGCGGGGCTTGGTaGGCAGTGCCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLGSGAW*AVPSPL
Trigger: CAGAGGGCTGGGCACTGCCCACCAAGCCCCGCTGCC...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACGGCAGCGGGGCTTGGTaGGCAGTGCCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VVSESLWSGLERASCLHHGSGAW*AVPSPL
Trigger: CAGAGGGCTGGGCACTGCCCACCAAGCCCCGCTGCC...GTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACGCAGGCAGCGGGGCTTaGTGGGCAGTGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHAGSGA*WAVPSP
Trigger: AGGGCTGGGCACTGCCCACCAAGCCCCGCTGCCTGC...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp TCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTGACACTGTCTCCTCATaGCCCAGCCCCTCCACGCTC +
Preference number: 4 (lower is better)
Translates to: SPAGAASHPLSLRPFWSLDTVSS*PSPSTL
Trigger: GAGCGTGGAGGGGCTGGGCCATGAGGAGACAGTGTC...AAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCCCTGCCCCTGGATCCTaGACACTGTCTCCTCATGGC +
Preference number: 4 (lower is better)
Translates to: AASHPLSLRPFWSLHTTAPAPGS*TLSPHG
Trigger: GCCATGAGGAGACAGTGTCCAGGATCCAGGGGCAGG...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTAACCACACCCTCTGCTaGCAGGTGGGCCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSNHTLC*QVGLQE
Trigger: TTCCTGCAGGCCCACCTGCCAGCAGAGGGTGTGGTT...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCCTGCCCAGCTCCTGCTaGAGGTGGAAGCCAAAACTC +
Preference number: 4 (lower is better)
Translates to: AASHPLSLRPFWSLHTTALPSSC*RWKPKL
Trigger: GAGTTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAG...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GGGCAATCCCAGCTGGCGACACTGTTCTTCCACCTCTGGCCCTGCCACCAGCAAGCCCTGCCCAGCTCCTaGTGCAGGTGGAAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: GQSQLATLFFHLWPCHQQALPSS*CRWKPK
Trigger: TTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAGGGC...TTGCTGGTGGCAGGGCCAGAGGTGGAAGAACAGTGTCGCCAGCTGGGATTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR GCA 90 bp GAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGTGCCTGGGTCCACCCTaGACACCACATGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ESLWSGLERASCLHHLRLCLGPP*TPHAQP
Trigger: GGGCTGGGCATGTGGTGTGCAGGGTGGACCCAGGCA...CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCGGCGCTGGGCAGAGGTaGCTGGGTCCACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLGAGQR*LGPPCT
Trigger: TGTGCAGGGTGGACCCAGGCACCTCTGCCCAGCGCC...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCGGCTGCTGGCCCGGATaGGGCGTACCACCACCGCAT +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTGCWPG*GVPPPH
Trigger: ATGCGGTGGTGGTACGCCGCATCCGGGCCAGCAGCC...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCGCAACACCCGAGGGCTaGTGGCCCGGATGCGGCGTA +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTATPEG*WPGCGV
Trigger: TACGCCGCATCCGGGCCAGCAGCCCTCGGGTGTTGC...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp AACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACACAGTGCCCAGCCCTCTaGCAGGGGTGCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: NKCNGDQAPPSRNAKAPTQCPAL*QGCSQG
Trigger: CCCCTGGCTGCACCCCTGGCAGAGGGCTGGGCACTG...TGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGCCGCAGAGACCTGGCTaGCAGCTTCAGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLEPQRPG*QLQAEG
Trigger: CCCCTCTGCCTGAAGCTGGCAGCCAGGTCTCTGCGG...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGCTGGGCAGAGGTGCCTaGGTCCACCCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLELGRGA*VHPAHH
Trigger: GTGGTGTGCAGGGTGGACCCAGGCACCTCTGCCCAG...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp AGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGACACCCGAGGGCTGCTaGCCCGGATGCGGCGTACCA +
Preference number: 4 (lower is better)
Translates to: RLESEDTVAPEYVCTKQGTPEGC*PGCGVP
Trigger: TGGTACGCCGCATCCGGGCCAGCAGCCCTCGGGTGT...CCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCACACCCGAGGGCTGCTaGCCCGGATGCGGCGTACCA +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLTPEGC*PGCGVP
Trigger: TGGTACGCCGCATCCGGGCCAGCAGCCCTCGGGTGT...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTCATCTTTCACTATGTaGCACAGCCGGGGCCGGACC +
Preference number: 4 (lower is better)
Translates to: GAPGPACDRWCLSPSGLASSFTM*HSRGRT
Trigger: GGTCCGGCCCCGGCTGTGCCACATAGTGAAAGATGA...AGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCCTGTTCTTCCACCTCTaGCCCTGCCACCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: AASHPLSLRPFWSLHTTALFFHL*PCHQQG
Trigger: ACCTTGCTGGTGGCAGGGCCAGAGGTGGAAGAACAG...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTAGGAACCCAAAACCCTaGGGCCCTTTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GAPGPACDRWCLSPSGLARNPKP*GPFSRC
Trigger: GCACCTGGAGAAAGGGCCCCAGGGTTTTGGGTTCCT...AGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGACCCAGCCTTCTTGGCTaGCAGTCCCGGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: VPLVWLRESILPSPPQAGPSLLG*QSRVHL
Trigger: GAGGTGGACCCGGGACTGCCAGCCAAGAAGGCTGGG...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCAGCCTGTGATCGGTaGTGTCTGAGTCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSPACDR*CLSPSG
Trigger: ACCAGAGGGACTCAGACACCACCGATCACAGGCTGG...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp CCTCTCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCAGCCTGAGGCCCTTTTaGTCCCTTCACACCACTGCC +
Preference number: 4 (lower is better)
Translates to: PLSCRSRIPPLEPEALLVSLRPF*SLHTTA
Trigger: GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCT...GACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGCAGGGTCGACGACAGTaGGGGAGACACAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLEQGRRQ*GRHRSP
Trigger: AGGGCTCCTGTGTCTCCCTCACTGTCGTCGACCCTG...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGACCTGGGCCAGCCTGTaGTCGGTGGTGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLETWASL*SVVSES
Trigger: GGACTCAGACACCACCGATCACAGGCTGGCCCAGGT...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTAACGAGGCTGTGTCCTaGAGATCTGCGGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSNEAVS*RSAAFS
Trigger: GGAGAAAGCCGCAGATCTGCAGGACACAGCCTCGTT...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
CDS-3UTR GCA 90 bp AACCTCTCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGCTGCCCAGCTCCTGCTaGAGGTGGAAGCCAAAACTC +
Preference number: 4 (lower is better)
Translates to: NLSPAGAASHPLSLRPFWLPSSC*RWKPKL
Trigger: GAGTTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAG...CCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGAGAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GGGCAATCCCAGCTGGCGACACTGTTCTTCCACCTCTGGCCCTGCCACCAGCAACTGCCCAGCTCCTGCTaGAGGTGGAAGCCAAAACTC +
Preference number: 4 (lower is better)
Translates to: GQSQLATLFFHLWPCHQQLPSSC*RWKPKL
Trigger: GAGTTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAG...TTGCTGGTGGCAGGGCCAGAGGTGGAAGAACAGTGTCGCCAGCTGGGATTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR GCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCCACATGCCCAGCCCTaGCCAGCTCCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHPHAQP*PAPAAG
Trigger: ACCTGCAGCAGGAGCTGGGCAGGGCTGGGCATGTGG...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCCCACATGCCCAGCCCTaGCCAGCTCCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTPHAQP*PAPAAG
Trigger: ACCTGCAGCAGGAGCTGGGCAGGGCTGGGCATGTGG...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCACCCTGCACACCACATaGCCAGCCCTGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLTLHTT*PALPSS
Trigger: GGAGCTGGGCAGGGCTGGGCATGTGGTGTGCAGGGT...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp AGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGACCCTGCACACCACATaGCCAGCCCTGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RLESEDTVAPEYVCTKQGTLHTT*PALPSS
Trigger: GGAGCTGGGCAGGGCTGGGCATGTGGTGTGCAGGGT...CCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCTGCCTGGGTCCACCCTaGACACCACATGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTCLGPP*TPHAQP
Trigger: GGGCTGGGCATGTGGTGTGCAGGGTGGACCCAGGCA...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTGCCACGTCATGTGCATaGCGTGCCAATACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GAPGPACDRWCLSPSGLAATSCA*RANTVS
Trigger: GCTGACAGTATTGGCACGGCATGCACATGACGTGGC...AGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTTCGGGCCACGTCATGTaGATGCCGTGCCAATACTGT +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSSGHVM*MPCQYC
Trigger: ACAGTATTGGCACGGCATGCACATGACGTGGCCCGA...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTACCAGCAAGGTCACCTaGTGTCCACTCTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSTSKVT*CPLCQS
Trigger: GCTTTGGCAGAGTGGACAGCAGGTGACCTTGCTGGT...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAATCACGTCTCCCACTTaGAGCCCAGCCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VPLVWLRESILPSPPQAGITSPT*SPARAA
Trigger: AGCTGCCCGGGCTGGGCTGCAAGTGGGAGACGTGAT...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGATCACGTCTCCCACTTaGAGCCCAGCCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLEITSPT*SPARAA
Trigger: AGCTGCCCGGGCTGGGCTGCAAGTGGGAGACGTGAT...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCCCGCAGAGACCTGGCTaGCAGCTTCAGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLPQRPG*QLQAEG
Trigger: CCCCTCTGCCTGAAGCTGGCAGCCAGGTCTCTGCGG...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCAGGCATATCTCAACCTCTCTCCTaGAGGAGCCGCATCCCACCC +
Preference number: 4 (lower is better)
Translates to: VTKHHPPAMLRHPQRAGISQPLS*RSRIPP
Trigger: GGGTGGGATGCGGCTCCTGCAGGAGAGAGGTTGAGA...TATGCCTGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTGGGATAGGGAATGGTTaGCAGGGGGTGAGGGAGTTA +
Preference number: 4 (lower is better)
Translates to: GAPGPACDRWCLSPSGLAGIGNG*QGVREL
Trigger: TAACTCCCTCACCCCCTGGCAACCATTCCCTATCCC...AGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp AACCTCTCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGCCTGACTTGTTTACCTaGCTCAGGGCTCCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: NLSPAGAASHPLSLRPFWPDLFT*LRAPSP
Trigger: GGGGCTTGGAGCCCTGAGGCAGGTAAACAAGTCAGG...CCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGAGAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR CCA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGACAGGAGCCCTGCCCCTaGATCCTGGACACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VPLVWLRESILPSPPQAGQEPCP*ILDTVS
Trigger: GGAGACAGTGTCCAGGATCCAGGGGCAGGGCTCCTG...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGCAGGAGCCCTGCCCCTaGATCCTGGACACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLEQEPCP*ILDTVS
Trigger: GGAGACAGTGTCCAGGATCCAGGGGCAGGGCTCCTG...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCGTGTCTGAGTCCCTCTaGTCTGGCTTAGAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: AGREGAPGPACDRWCLSPVSESL*SGLERA
Trigger: TGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC...GGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGATCGGAGGCCGTGTaGAGCCGTGGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLRSEAV*SRGASR
Trigger: CCTGGAGGCACCACGGCTCCACACGGCCTCCGATCT...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp CCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGAGATCCTGTCTCCTTCCTaGAGACCCTGGCGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PLVWLRESILPSPPQAGEILSPS*RPWRWA
Trigger: TGCCCAGCGCCAGGGTCTTCAGGAAGGAGACAGGAT...CTCTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCCAGGGTCGACGACAGTaGGGGAGACACAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTQGRRQ*GRHRSP
Trigger: AGGGCTCCTGTGTCTCCCTCACTGTCGTCGACCCTG...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGAGTCACCTGGGAGATaGAGAGACGAGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: VPLVWLRESILPSPPQAGESPGR*RDEAHW
Trigger: CCAGTGGGCCTCGTCTCTTCATCTCCCAGGTGACTC...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp CCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGAGGAGTCACCTGGGAGATaGAGAGACGAGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: PLVWLRESILPSPPQAGEESPGR*RDEAHW
Trigger: CCAGTGGGCCTCGTCTCTTCATCTCCCAGGTGACTC...CTCTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCAGGCATAGTGATCGGTGGTGTCTaGGTCCCTCTGGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VTKHHPPAMLRHPQRAGIVIGGV*VPLVWL
Trigger: AAGCCAGACCAGAGGGACTCAGACACCACCGATCAC...TATGCCTGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCACCTGGGCCAGCCTGTaGTCGGTGGTGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLTWASL*SVVSES
Trigger: GGACTCAGACACCACCGATCACAGGCTGGCCCAGGT...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGACTTCAGGGACCTGTCTaGGGCCTCCAACCACACCCT +
Preference number: 4 (lower is better)
Translates to: VPLVWLRESILPSPPQAGLQGPV*GLQPHP
Trigger: AGGGTGTGGTTGGAGGCCTCAGACAGGTCCCTGAAG...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACAGCCGGTCCCCAGCCTaGATCCCAGCCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VVSESLWSGLERASCLHHSRSPA*IPAFLA
Trigger: AGCCAAGAAGGCTGGGATGCAGGCTGGGGACCGGCT...GTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACAGCCGGTCCCCAGCCTaGATCCCAGCCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHSRSPA*IPAFLA
Trigger: AGCCAAGAAGGCTGGGATGCAGGCTGGGGACCGGCT...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp TTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCAGTGAGGCTGAGCTaGTGCCCCGGGGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FYNKCNGDQAPPSRNAKAPVRLS*CPGARR
Trigger: CCGCCTCGCCCCGGGGCAGCAGCTCAGCCTCACTGG...TGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCAGAGCCCAGTCCTCTaGAGCCCCAGGGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHQSPVL*SPRGNP
Trigger: TGGATTCCCCCTGGGGCTGCAGAGGACTGGGCTCTG...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTCTCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCTGTACCAAGCAGGGGTaGTCTACAGTAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: PLSCRSRIPPLEPEALLVCTKQG*STVDPR
Trigger: CCTCGGATCTACTGTAGAGCACCCCTGCTTGGTACA...GACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTTGTACCAAGCAGGGGTaGTCTACAGTAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSCTKQG*STVDPR
Trigger: CCTCGGATCTACTGTAGAGCACCCCTGCTTGGTACA...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCTCCAACCACACCCTCTaGTGGCAGGTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTSNHTL*WQVGLQ
Trigger: CTGCAGGCCCACCTGCCAGCAGAGGGTGTGGTTGGA...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACTCCAACCACACCCTCTaGTGGCAGGTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VVSESLWSGLERASCLHHSNHTL*WQVGLQ
Trigger: CTGCAGGCCCACCTGCCAGCAGAGGGTGTGGTTGGA...GTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCACCTGCTGTCCACTCTaGCAAAGCTTCCTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: AASHPLSLRPFWSLHTTATCCPL*QSFLVS
Trigger: ACTCACCAGGAAGCTTTGGCAGAGTGGACAGCAGGT...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GCAATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCAGGCAGCGGGGCTTGGTaGGCAGTGCCCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AMLRHPQRAGIAGLQIFAGSGAW*AVPSPL
Trigger: CAGAGGGCTGGGCACTGCCCACCAAGCCCCGCTGCC...TGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGCCTGCCCCTGGATCCTaGACACTGTCTCCTCATGGC +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLEPAPGS*TLSPHG
Trigger: GCCATGAGGAGACAGTGTCCAGGATCCAGGGGCAGG...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGAACCACACCCTCTGCTaGCAGGTGGGCCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLENHTLC*QVGLQE
Trigger: TTCCTGCAGGCCCACCTGCCAGCAGAGGGTGTGGTT...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp CCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGAGTGGTTGGGTGTTGGGTaGTGGGGTTCGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLVWLRESILPSPPQAGEWLGVG*WGSWAE
Trigger: CTCTGCCCACGAACCCCACCACCCAACACCCAACCA...CTCTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR TCA 90 bp AGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGATCCTGTCTCCTTCCTaGAGACCCTGGCGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RLESEDTVAPEYVCTKQGILSPS*RPWRWA
Trigger: TGCCCAGCGCCAGGGTCTTCAGGAAGGAGACAGGAT...CCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCACAGGCGAACCATGCTaGAGAAGCGGTCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLTGEPC*RSGPPQ
Trigger: CTGAGGCGGACCGCTTCTTCAGCATGGTTCGCCTGT...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACACAGGCGAACCATGCTaGAGAAGCGGTCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHTGEPC*RSGPPQ
Trigger: CTGAGGCGGACCGCTTCTTCAGCATGGTTCGCCTGT...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGACACTGGCCACACAACTaGGTCGGAAGCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPLVWLRESILPSPPQAGHWPHN*VGSHSC
Trigger: GCAGCTATGGCTTCCGACTCAGTTGTGTGGCCAGTG...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGGTGATCGGTGGTGTCTaGGTCCCTCTGGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLEVIGGV*VPLVWL
Trigger: AAGCCAGACCAGAGGGACTCAGACACCACCGATCAC...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp AGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGCTTCAGGGACCTGTCTaGGGCCTCCAACCACACCCT +
Preference number: 4 (lower is better)
Translates to: RLESEDTVAPEYVCTKQGLQGPV*GLQPHP
Trigger: AGGGTGTGGTTGGAGGCCTCAGACAGGTCCCTGAAG...CCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTTCAGGGACCTGTCTaGGGCCTCCAACCACACCCT +
Preference number: 4 (lower is better)
Translates to: VVSESLWSGLERASCLHHLQGPV*GLQPHP
Trigger: AGGGTGTGGTTGGAGGCCTCAGACAGGTCCCTGAAG...GTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTCTGGTGAGTTGGTTGTaGGTGAACTTCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: GAPGPACDRWCLSPSGLALVSWL*VNFSTL
Trigger: CAGTGTGGAGAAGTTCACTCACAACCAACTCACCAG...AGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTCTTGCCCTCCTCTTTaGTCAGTAAACAGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: AGREGAPGPACDRWCLSPSCPPL*SVNRSE
Trigger: CTCGCTTCTGTTTACTGAGCAAAGAGGAGGGCAAGA...GGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGAGCTGCCCAGCTCCTGCTaGAGGTGGAAGCCAAAACTC +
Preference number: 4 (lower is better)
Translates to: PLVWLRESILPSPPQAGELPSSC*RWKPKL
Trigger: GAGTTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAG...CTCTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACGCCCTGCCCAGCTCCTaGTGCAGGTGGAAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHALPSS*CRWKPK
Trigger: TTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAGGGC...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCGCCCTGCCCAGCTCCTaGTGCAGGTGGAAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLALPSS*CRWKPK
Trigger: TTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAGGGC...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCGCCCTGCCCAGCTCCTaGTGCAGGTGGAAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTALPSS*CRWKPK
Trigger: TTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAGGGC...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTCACTTCCAGCAGCCGACCCTGCACACCACATaGCCAGCCCTGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ELVVSELLHTDPIHFQQPTLHTT*PALPSS
Trigger: GGAGCTGGGCAGGGCTGGGCATGTGGTGTGCAGGGT...CGGCTGCTGGAAGTGAATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR GCA 90 bp CCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTCACTTCCAGGGCGCTGGGCAGAGGTaGCTGGGTCCACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: PGELVVSELLHTDPIHFQGAGQR*LGPPCT
Trigger: TGTGCAGGGTGGACCCAGGCACCTCTGCCCAGCGCC...CTGGAAGTGAATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR GCA 90 bp GCAATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCAGGCTGCTGGCCCGGATaGGGCGTACCACCACCGCAT +
Preference number: 4 (lower is better)
Translates to: AMLRHPQRAGIAGLQIFAGCWPG*GVPPPH
Trigger: ATGCGGTGGTGGTACGCCGCATCCGGGCCAGCAGCC...TGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTGTCATGTGCATGCCGTaGCAATACTGTCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: GAPGPACDRWCLSPSGLAVMCMP*QYCQQH
Trigger: GTGTTGCTGACAGTATTGGCACGGCATGCACATGAC...AGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCGAGACACAGGAGCCCTaGCCCTGGATCCTGGACACT +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTETQEP*PWILDT
Trigger: AGTGTCCAGGATCCAGGGGCAGGGCTCCTGTGTCTC...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCATGTACCAAGCAGGGGTaGTCTACAGTAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: ATVTKHHPPAMLRHPQRACTKQG*STVDPR
Trigger: CCTCGGATCTACTGTAGAGCACCCCTGCTTGGTACA...TGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCATTAGAGAGAGCATCCTaGCTTCACCACCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ATVTKHHPPAMLRHPQRALERAS*LHHLRL
Trigger: CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAA...TGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACTCTCAACCTCTCTCCTaGAGGAGCCGCATCCCACCC +
Preference number: 4 (lower is better)
Translates to: VVSESLWSGLERASCLHHSQPLS*RSRIPP
Trigger: GGGTGGGATGCGGCTCCTGCAGGAGAGAGGTTGAGA...GTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTAACGAGGCTGTGTCCTaGAGATCTACTGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSNEAVS*RSTGQR
Trigger: TCTTTGCCCAGTAGATCTGCAGGACACAGCCTCGTT...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR GCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCCCCCAAAATCAAGTGTaGCCTGGTCCCAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AASHPLSLRPFWSLHTTAPQNQV*PGPKAS
Trigger: TGAAGCTTTGGGACCAGGGCACACTTGATTTTGGGG...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR GCA 90 bp GAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGCCCAAACTCAGGGCATaGCCCCTCCTTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ESLWSGLERASCLHHLRLPKLRA*PLLSAP
Trigger: TGGAGCAGAAAGGAGGGGGCATGCCCTGAGTTTGGG...CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR CCA 90 bp CCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGAGCTGTTCTTCCACCTCTaGCCCTGCCACCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: PLVWLRESILPSPPQAGELFFHL*PCHQQG
Trigger: ACCTTGCTGGTGGCAGGGCCAGAGGTGGAAGAACAG...CTCTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp CCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGAGAGGGGCAATCCCAGCTaGCGACACTGTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: PLVWLRESILPSPPQAGERGNPS*RHCSST
Trigger: GGTGGAAGAACAGTGTCGCCAGCTGGGATTGCCCCT...CTCTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGACCAGCCTGTGATCGGTaGTGTCTGAGTCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: VPLVWLRESILPSPPQAGPACDR*CLSPSG
Trigger: ACCAGAGGGACTCAGACACCACCGATCACAGGCTGG...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCACTGGCCACACAACTaGGTCGGAAGCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: VVSESLWSGLERASCLHHHWPHN*VGSHSC
Trigger: GCAGCTATGGCTTCCGACTCAGTTGTGTGGCCAGTG...GTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACGTGATCGGTGGTGTCTaGGTCCCTCTGGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VVSESLWSGLERASCLHHVIGGV*VPLVWL
Trigger: AAGCCAGACCAGAGGGACTCAGACACCACCGATCAC...GTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTTCTAAAACTCCCATATaGCATCCTCTGGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSSKTPI*HPLEPQ
Trigger: CTGAGGCTCCAGAGGATGTCATATGGGAGTTTTAGA...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCGGCGCTGGGCAGAGGTaGCTGGGTCCACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: PQRAGIAGLQIFALHSRVGAGQR*LGPPCT
Trigger: TGTGCAGGGTGGACCCAGGCACCTCTGCCCAGCGCC...GACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCAGGCGCTGGGCAGAGGTaGCTGGGTCCACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: FYNKCNGDQAPPSRNAKAGAGQR*LGPPCT
Trigger: TGTGCAGGGTGGACCCAGGCACCTCTGCCCAGCGCC...TGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCGCAACACCCGAGGGCTaGTGGCCCGGATGCGGCGTA +
Preference number: 4 (lower is better)
Translates to: PQRAGIAGLQIFALHSRVATPEG*WPGCGV
Trigger: TACGCCGCATCCGGGCCAGCAGCCCTCGGGTGTTGC...GACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGCCACGTCATGTGCATaGCGTGCCAATACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VPLVWLRESILPSPPQAGATSCA*RANTVS
Trigger: GCTGACAGTATTGGCACGGCATGCACATGACGTGGC...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCGTCCCTTCACACCACTaGCCCTTACCCCCACCAACA +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLVPSHH*PLPPPT
Trigger: TGTTGGTGGGGGTAAGGGGCAGTGGTGTGAAGGGAC...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GGGCAATCCCAGCTGGCGACACTGTTCTTCCACCTCTGGCCCTGCCACCAGCAAAGAAAGGACCCTGATTaGCACCGCATAGTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: GQSQLATLFFHLWPCHQQRKDPD*HRIVFV
Trigger: CACGAAGACTATGCGGTGGCAATCAGGGTCCTTTCT...TTGCTGGTGGCAGGGCCAGAGGTGGAAGAACAGTGTCGCCAGCTGGGATTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR CCA 90 bp GCAATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCACTGGGCAGAGGTGCCTaGGTCCACCCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: AMLRHPQRAGIAGLQIFALGRGA*VHPAHH
Trigger: GTGGTGTGCAGGGTGGACCCAGGCACCTCTGCCCAG...TGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp TTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCAACACCCGAGGGCTGCTaGCCCGGATGCGGCGTACCA +
Preference number: 4 (lower is better)
Translates to: FYNKCNGDQAPPSRNAKATPEGC*PGCGVP
Trigger: TGGTACGCCGCATCCGGGCCAGCAGCCCTCGGGTGT...TGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACTCATCTTTCACTATGTaGCACAGCCGGGGCCGGACC +
Preference number: 4 (lower is better)
Translates to: VVSESLWSGLERASCLHHSSFTM*HSRGRT
Trigger: GGTCCGGCCCCGGCTGTGCCACATAGTGAAAGATGA...GTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp AGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGTCATCTTTCACTATGTaGCACAGCCGGGGCCGGACC +
Preference number: 4 (lower is better)
Translates to: RLESEDTVAPEYVCTKQGSSFTM*HSRGRT
Trigger: GGTCCGGCCCCGGCTGTGCCACATAGTGAAAGATGA...CCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAGGGGCAATCCCAGCTaGCGACACTGTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTRGNPS*RHCSST
Trigger: GGTGGAAGAACAGTGTCGCCAGCTGGGATTGCCCCT...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp AGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGAGGGGCAATCCCAGCTaGCGACACTGTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: RLESEDTVAPEYVCTKQGRGNPS*RHCSST
Trigger: GGTGGAAGAACAGTGTCGCCAGCTGGGATTGCCCCT...CCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACAGCAGGCAGCGGGGCTTaGTGGGCAGTGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SYLEKVQMASILARPTATAGSGA*WAVPSP
Trigger: AGGGCTGGGCACTGCCCACCAAGCCCCGCTGCCTGC...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp CTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCAGGCAGCGGGGCTTaGTGGGCAGTGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LESYLEKVQMASILARPTAGSGA*WAVPSP
Trigger: AGGGCTGGGCACTGCCCACCAAGCCCCGCTGCCTGC...TGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAGCCTGAGGCCCTTTTaGTCCCTTCACACCACTGCC +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTSLRPF*SLHTTA
Trigger: GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCT...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACTCCAGGGATAGGGAATaGTTGCCAGGGGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHSRDRE*LPGGEG
Trigger: TCCCTCACCCCCTGGCAACCATTCCCTATCCCTGGA...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCTCCAGGGATAGGGAATaGTTGCCAGGGGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLSRDRE*LPGGEG
Trigger: TCCCTCACCCCCTGGCAACCATTCCCTATCCCTGGA...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp TCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTAAATCAAGTGTGCCCTaGTCCCAAAGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SPAGAASHPLSLRPFWSLKSSVP*SQSFSL
Trigger: GAGGCTGAAGCTTTGGGACCAGGGCACACTTGATTT...AAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR TCA 90 bp GAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTCACTTCCAGCAGCCGATCCTGTCTCCTTCCTaGAGACCCTGGCGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ELVVSELLHTDPIHFQQPILSPS*RPWRWA
Trigger: TGCCCAGCGCCAGGGTCTTCAGGAAGGAGACAGGAT...CGGCTGCTGGAAGTGAATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR TCA 90 bp GAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGAGACACGGTAGCCCCTaGGTATGTCTGTACCAAGCA +
Preference number: 4 (lower is better)
Translates to: ESLWSGLERASCLHHLRLRHGSP*VCLYQA
Trigger: TGCTTGGTACAGACATACTCAGGGGCTACCGTGTCT...CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAAGACACGGTAGCCCCTaGGTATGTCTGTACCAAGCA +
Preference number: 4 (lower is better)
Translates to: VPLVWLRESILPSPPQAGRHGSP*VCLYQA
Trigger: TGCTTGGTACAGACATACTCAGGGGCTACCGTGTCT...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR TCA 90 bp GCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTTGACCCATTATCCCTaGGATTCAGTGATTGATAGG +
Preference number: 4 (lower is better)
Translates to: AGREGAPGPACDRWCLSPLTHYP*DSVIDR
Trigger: CCTATCAATCACTGAATCTCAGGGATAATGGGTCAA...GGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCATCTCAGTTCTGGGTTaGCCCATTATCCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: AASHPLSLRPFWSLHTTAISVLG*PIIPEI
Trigger: AATCTCAGGGATAATGGGTCAACCCAGAACTGAGAT...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACCCACATGCCCAGCCCTaGCCAGCTCCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LRHPQRAGIAGLQIFALHPHAQP*PAPAAG
Trigger: ACCTGCAGCAGGAGCTGGGCAGGGCTGGGCATGTGG...GTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCAAAGCTTCCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTCCACATGCCCAGCCCTaGCCAGCTCCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PKLPGELVVSELLHTDPIPHAQP*PAPAAG
Trigger: ACCTGCAGCAGGAGCTGGGCAGGGCTGGGCATGTGG...AATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGGAAGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR GCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCTGCCTGGGTCCACCCTaGACACCACATGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLCLGPP*TPHAQP
Trigger: GGGCTGGGCATGTGGTGTGCAGGGTGGACCCAGGCA...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CTTCCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTCACTTCTGCCTGGGTCCACCCTaGACACCACATGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPGELVVSELLHTDPIHFCLGPP*TPHAQP
Trigger: GGGCTGGGCATGTGGTGTGCAGGGTGGACCCAGGCA...GAAGTGAATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR GCA 90 bp CTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGGCTGCTGGCCCGGATaGGGCGTACCACCACCGCAT +
Preference number: 4 (lower is better)
Translates to: LESYLEKVQMASILARPTGCWPG*GVPPPH
Trigger: ATGCGGTGGTGGTACGCCGCATCCGGGCCAGCAGCC...TGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCAACACCCGAGGGCTaGTGGCCCGGATGCGGCGTA +
Preference number: 4 (lower is better)
Translates to: LESYLEKVQMASILARPTATPEG*WPGCGV
Trigger: TACGCCGCATCCGGGCCAGCAGCCCTCGGGTGTTGC...TGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp AGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGTCGGGCCACGTCATGTaGATGCCGTGCCAATACTGT +
Preference number: 4 (lower is better)
Translates to: RLESEDTVAPEYVCTKQGSGHVM*MPCQYC
Trigger: ACAGTATTGGCACGGCATGCACATGACGTGGCCCGA...CCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACACCAGCAAGGTCACCTaGTGTCCACTCTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHTSKVT*CPLCQS
Trigger: GCTTTGGCAGAGTGGACAGCAGGTGACCTTGCTGGT...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACAGCCCTCTGCCAGGGGTaGAGCCAGGGGCAATCCCAG +
Preference number: 4 (lower is better)
Translates to: SYLEKVQMASILARPTATALCQG*SQGQSQ
Trigger: CTGGGATTGCCCCTGGCTGCACCCCTGGCAGAGGGC...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp ATTTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGGCCCTCTGCCAGGGGTaGAGCCAGGGGCAATCCCAG +
Preference number: 4 (lower is better)
Translates to: ISITNATVTKHHPPAMLRALCQG*SQGQSQ
Trigger: CTGGGATTGCCCCTGGCTGCACCCCTGGCAGAGGGC...CCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GCAATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCAAGCCGGTCCCCAGCCTaGATCCCAGCCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AMLRHPQRAGIAGLQIFASRSPA*IPAFLA
Trigger: AGCCAAGAAGGCTGGGATGCAGGCTGGGGACCGGCT...TGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCCGCAGAGACCTGGCTaGCAGCTTCAGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PQRAGIAGLQIFALHSRVPQRPG*QLQAEG
Trigger: CCCCTCTGCCTGAAGCTGGCAGCCAGGTCTCTGCGG...GACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGTTAGAGAGAGCATCCTaGCTTCACCACCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ESLWSGLERASCLHHLRLLERAS*LHHLRL
Trigger: CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAA...CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAACCTGCTGTCCACTCTaGCAAAGCTTCCTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: VPLVWLRESILPSPPQAGTCCPL*QSFLVS
Trigger: ACTCACCAGGAAGCTTTGGCAGAGTGGACAGCAGGT...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTCTCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCTCTTCTCCCCAGATGTaGCTCTTCCATTGGCATAAA +
Preference number: 4 (lower is better)
Translates to: PLSCRSRIPPLEPEALLVSSPQM*LFHWHK
Trigger: TTTATGCCAATGGAAGAGGCACATCTGGGGAGAAGA...GACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCTGTCCCAAAGTCCCCTaGAGAGGATTTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLCPKVP*RGFLLA
Trigger: GGCCAGGAGAAATCCTCTGCAGGGGACTTTGGGACA...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGAGATGCCCCCTCCTTTCTaGTCCAAAGGGGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PLVWLRESILPSPPQAGEMPPPF*SKGVFS
Trigger: AGAGAAGACCCCTTTGGAGCAGAAAGGAGGGGGCAT...CTCTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR CCA 90 bp GCAATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCACAGGAGCCCTGCCCCTaGATCCTGGACACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: AMLRHPQRAGIAGLQIFAQEPCP*ILDTVS
Trigger: GGAGACAGTGTCCAGGATCCAGGGGCAGGGCTCCTG...TGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCTCCAAGAAGAGGAGTaGGGACAGGCGAACCATGCT +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHLQEEE*GQANHA
Trigger: AGCATGGTTCGCCTGTCCCCACTCCTCTTCTTGGAG...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGGTGTCTGAGTCCCTCTaGTCTGGCTTAGAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLEVSESL*SGLERA
Trigger: TGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTGAGGGCAGGCATAGCTaGTCTCCAAATTTTTGCATT +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSEGRHS*SPNFCI
Trigger: AATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTC...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp TTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCAAGATCGGAGGCCGTGTaGAGCCGTGGTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FYNKCNGDQAPPSRNAKARSEAV*SRGASR
Trigger: CCTGGAGGCACCACGGCTCCACACGGCCTCCGATCT...TGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR CCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACGGGAGACCGAGTGAGTaGTTACCAAGGAGATCGGAG +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHGRPSE*LPRRSE
Trigger: CTCCGATCTCCTTGGTAACCACTCACTCGGTCTCCC...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR TCA 90 bp GCAATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCACTTCAGGGACCTGTCTaGGGCCTCCAACCACACCCT +
Preference number: 4 (lower is better)
Translates to: AMLRHPQRAGIAGLQIFALQGPV*GLQPHP
Trigger: AGGGTGTGGTTGGAGGCCTCAGACAGGTCCCTGAAG...TGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp TCTCCTGCAGGAGCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTATCTCAGTTCTGGGTTaGCCCATTATCCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SPAGAASHPLSLRPFWSLISVLG*PIIPEI
Trigger: AATCTCAGGGATAATGGGTCAACCCAGAACTGAGAT...AAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGCTCCTGCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGCTGGTGAGTTGGTTGTaGGTGAACTTCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLELVSWL*VNFSTL
Trigger: CAGTGTGGAGAAGTTCACTCACAACCAACTCACCAG...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACAACCCTGCACACCACATaGCCAGCCCTGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SYLEKVQMASILARPTATTLHTT*PALPSS
Trigger: GGAGCTGGGCAGGGCTGGGCATGTGGTGTGCAGGGT...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCGGCTGCTGGCCCGGATaGGGCGTACCACCACCGCAT +
Preference number: 4 (lower is better)
Translates to: CITLKGPGVISRKGPDGFGCWPG*GVPPPH
Trigger: ATGCGGTGGTGGTACGCCGCATCCGGGCCAGCAGCC...GAAGCCATCTGGACCTTTTCTAGATATGACTCCAGGACCCTTGAGTGTAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp AACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAACCAGCAAGGTCACCTaGTGTCCACTCTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: NKCNGDQAPPSRNAKAPTTSKVT*CPLCQS
Trigger: GCTTTGGCAGAGTGGACAGCAGGTGACCTTGCTGGT...TGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCATCACGTCTCCCACTTaGAGCCCAGCCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLITSPT*SPARAA
Trigger: AGCTGCCCGGGCTGGGCTGCAAGTGGGAGACGTGAT...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACTTAGAGAGAGCATCCTaGCTTCACCACCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VVSESLWSGLERASCLHHLERAS*LHHLRL
Trigger: CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAA...GTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCACCTGCTGTCCACTCTaGCAAAGCTTCCTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTTCCPL*QSFLVS
Trigger: ACTCACCAGGAAGCTTTGGCAGAGTGGACAGCAGGT...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCTCCAAGTCGGCCCCCTaGCTGTCCCAAAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLSKSAP*LSQSPL
Trigger: CAGGGGACTTTGGGACAGGCAGGGGGCCGACTTGGA...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR CCA 90 bp TACCCCCACCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTCTGGGCAGAGGTGCCTaGGTCCACCCTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: YPHQHKHRQSDLWRMAISLGRGA*VHPAHH
Trigger: GTGGTGTGCAGGGTGGACCCAGGCACCTCTGCCCAG...AGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGGTGGGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp TTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACAGGAGCCCTGCCCCTaGATCCTGGACACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: FYNKCNGDQAPPSRNAKAQEPCP*ILDTVS
Trigger: GGAGACAGTGTCCAGGATCCAGGGGCAGGGCTCCTG...TGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCGTGTCTGAGTCCCTCTaGTCTGGCTTAGAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLVSESL*SGLERA
Trigger: TGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp AGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGGTGTCTGAGTCCCTCTaGTCTGGCTTAGAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RLESEDTVAPEYVCTKQGVSESL*SGLERA
Trigger: TGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC...CCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCAGAGGGCAGGCATAGCTaGTCTCCAAATTTTTGCATT +
Preference number: 4 (lower is better)
Translates to: ATVTKHHPPAMLRHPQRAEGRHS*SPNFCI
Trigger: AATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTC...TGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp TTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCAGAGTCACCTGGGAGATaGAGAGACGAGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: FYNKCNGDQAPPSRNAKAESPGR*RDEAHW
Trigger: CCAGTGGGCCTCGTCTCTTCATCTCCCAGGTGACTC...TGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAAGCCGGTCCCCAGCCTaGATCCCAGCCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LESYLEKVQMASILARPTSRSPA*IPAFLA
Trigger: AGCCAAGAAGGCTGGGATGCAGGCTGGGGACCGGCT...TGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCGAGACACAGGAGCCCTaGCCCTGGATCCTGGACACT +
Preference number: 4 (lower is better)
Translates to: ESYLEKVQMASILARPTAETQEP*PWILDT
Trigger: AGTGTCCAGGATCCAGGGGCAGGGCTCCTGTGTCTC...GGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCAGAGACACAGGAGCCCTaGCCCTGGATCCTGGACACT +
Preference number: 4 (lower is better)
Translates to: FYNKCNGDQAPPSRNAKAETQEP*PWILDT
Trigger: AGTGTCCAGGATCCAGGGGCAGGGCTCCTGTGTCTC...TGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCGAGACACAGGAGCCCTaGCCCTGGATCCTGGACACT +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLETQEP*PWILDT
Trigger: AGTGTCCAGGATCCAGGGGCAGGGCTCCTGTGTCTC...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp ATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTACCAGTGAGGCTGAGCTaGTGCCCCGGGGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: IAGLQIFALHSRVLESYLPVRLS*CPGARR
Trigger: CCGCCTCGCCCCGGGGCAGCAGCTCAGCCTCACTGG...TAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCATTTCTATAACAAATaGAACGGTGACCAAGCACCA +
Preference number: 4 (lower is better)
Translates to: PAGREGAPGPACDRWCLSHFYNK*NGDQAP
Trigger: TGGTGCTTGGTCACCGTTGCATTTGTTATAGAAATG...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCCATTTCTATAACAAATaGAACGGTGACCAAGCACCA +
Preference number: 4 (lower is better)
Translates to: AASHPLSLRPFWSLHTTAHFYNK*NGDQAP
Trigger: TGGTGCTTGGTCACCGTTGCATTTGTTATAGAAATG...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCTACAGGTTCGCCGTGTaGCTGGCAGACCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: ESYLEKVQMASILARPTAYRFAV*LADPVS
Trigger: GGACACAGGGTCTGCCAGGCACACGGCGAACCTGTA...GGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR CCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCCCTGCCCCTGGATCCTaGACACTGTCTCCTCATGGC +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLPAPGS*TLSPHG
Trigger: GCCATGAGGAGACAGTGTCCAGGATCCAGGGGCAGG...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCCATATGACATCCTCTaGAGCCTCAGACTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHPYDIL*SLRLLQ
Trigger: CTGAAGGAGTCTGAGGCTCCAGAGGATGTCATATGG...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp CACCACCTCAGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCCCATATGACATCCTCTaGAGCCTCAGACTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: HHLRLESEDTVAPEYVCTPYDIL*SLRLLQ
Trigger: CTGAAGGAGTCTGAGGCTCCAGAGGATGTCATATGG...GGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCTGAGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGCAGACATCTCAGTTCTaGGTTGACCCATTATCCCTG +
Preference number: 4 (lower is better)
Translates to: SLWSGLERASCLHHLRLEQTSQF*VDPLSL
Trigger: CAGGGATAATGGGTCAACCCAGAACTGAGATGTCTG...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp CCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCGGTTCGCCGTGTGCCTaGCAGACCCTGTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PQRAGIAGLQIFALHSRVGSPCA*QTLCPD
Trigger: ATCAGGACACAGGGTCTGCCAGGCACACGGCGAACC...GACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR TCA 90 bp CTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAATCCTGTCTCCTTCCTaGAGACCCTGGCGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LESYLEKVQMASILARPTILSPS*RPWRWA
Trigger: TGCCCAGCGCCAGGGTCTTCAGGAAGGAGACAGGAT...TGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp TACCCCCACCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTGCATCTTCTCCCAGCTaGGCTCGGGCCACGTCATGT +
Preference number: 4 (lower is better)
Translates to: YPHQHKHRQSDLWRMAISASSPS*ARATSC
Trigger: ACATGACGTGGCCCGAGCTCAGCTGGGAGAAGATGC...AGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGGTGGGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACGGAAGCCAAAACTCTTaGCCTCCTCTTTGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHGSQNS*PPLCSV
Trigger: TACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCC...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp GTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACGGAAGCCAAAACTCTTaGCCTCCTCTTTGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VVSESLWSGLERASCLHHGSQNS*PPLCSV
Trigger: TACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCC...GTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR GCA 90 bp CTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACCTGCCCAGCTCCTGCTaGAGGTGGAAGCCAAAACTC +
Preference number: 4 (lower is better)
Translates to: LRHPQRAGIAGLQIFALHLPSSC*RWKPKL
Trigger: GAGTTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAG...GTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCCTGCCCAGCTCCTaGTGCAGGTGGAAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: LESYLEKVQMASILARPTALPSS*CRWKPK
Trigger: TTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAGGGC...TGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp AATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTGTCGGAAGCCATAGCTaGCACCAGGCCCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: NAKAPTEGRHSWSPNFCIVGSHS*HQAQGT
Trigger: TGTACCCTGGGCCTGGTGGCAGCTATGGCTTCCGAC...AATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCGTCCCTTCACACCACTaGCCCTTACCCCCACCAACA +
Preference number: 4 (lower is better)
Translates to: ESYLEKVQMASILARPTAVPSHH*PLPPPT
Trigger: TGTTGGTGGGGGTAAGGGGCAGTGGTGTGAAGGGAC...GGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TACCCCCACCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTTCTCAACCTCTCTCCTaGAGGAGCCGCATCCCACCC +
Preference number: 4 (lower is better)
Translates to: YPHQHKHRQSDLWRMAISSQPLS*RSRIPP
Trigger: GGGTGGGATGCGGCTCCTGCAGGAGAGAGGTTGAGA...AGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGGTGGGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GCCGCATCCCACCCCTTGAGCCTGAGGCCCTTTTGGTCCCTTCACACCACTGCCATCAATGCCCAGCTTTaGGTTAAACTTAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: AASHPLSLRPFWSLHTTAINAQL*VKLKLQ
Trigger: CTGAAGTTTAAGTTTAACCCAAAGCTGGGCATTGAT...GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCCTGTTCTTCCACCTCTaGCCCTGCCACCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLLFFHL*PCHQQG
Trigger: ACCTTGCTGGTGGCAGGGCCAGAGGTGGAAGAACAG...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp CCAAAGCTTCCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTCTGTTCTTCCACCTCTaGCCCTGCCACCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: PKLPGELVVSELLHTDPILFFHL*PCHQQG
Trigger: ACCTTGCTGGTGGCAGGGCCAGAGGTGGAAGAACAG...AATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGGAAGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR CCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCAGGGGCAATCCCAGCTaGCGACACTGTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLRGNPS*RHCSST
Trigger: GGTGGAAGAACAGTGTCGCCAGCTGGGATTGCCCCT...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp CCAAAGCTTCCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTAGGGGCAATCCCAGCTaGCGACACTGTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: PKLPGELVVSELLHTDPIRGNPS*RHCSST
Trigger: GGTGGAAGAACAGTGTCGCCAGCTGGGATTGCCCCT...AATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGGAAGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR CCA 90 bp GAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCAGGAACCCAAAACCCTaGGGCCCTTTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ESYLEKVQMASILARPTARNPKP*GPFSRC
Trigger: GCACCTGGAGAAAGGGCCCCAGGGTTTTGGGTTCCT...GGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCCCAGCCTGTGATCGGTaGTGTCTGAGTCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLPACDR*CLSPSG
Trigger: ACCAGAGGGACTCAGACACCACCGATCACAGGCTGG...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp CTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAAACCACACCCTCTGCTaGCAGGTGGGCCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LESYLEKVQMASILARPTNHTLC*QVGLQE
Trigger: TTCCTGCAGGCCCACCTGCCAGCAGAGGGTGTGGTT...TGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp TGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCACAGGCGAACCATGCTaGAGAAGCGGTCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CITLKGPGVISRKGPDGFTGEPC*RSGPPQ
Trigger: CTGAGGCGGACCGCTTCTTCAGCATGGTTCGCCTGT...GAAGCCATCTGGACCTTTTCTAGATATGACTCCAGGACCCTTGAGTGTAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp AATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTCACTGGCCACACAACTaGGTCGGAAGCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: NAKAPTEGRHSWSPNFCIHWPHN*VGSHSC
Trigger: GCAGCTATGGCTTCCGACTCAGTTGTGTGGCCAGTG...AATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCATCTCAGTTCTGGGTTaGCCCATTATCCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLISVLG*PIIPEI
Trigger: AATCTCAGGGATAATGGGTCAACCCAGAACTGAGAT...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCAAAGCTTCCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTAACGAGGCTGTGTCCTaGAGATCTGCGGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PKLPGELVVSELLHTDPINEAVS*RSAAFS
Trigger: GGAGAAAGCCGCAGATCTGCAGGACACAGCCTCGTT...AATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGGAAGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR GCA 90 bp AGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGACCACATGCCCAGCCCTaGCCAGCTCCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SWSPNFCITLKGPGVISRPHAQP*PAPAAG
Trigger: ACCTGCAGCAGGAGCTGGGCAGGGCTGGGCATGTGG...TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAAGGCGCTGGGCAGAGGTaGCTGGGTCCACCCTGCACA +
Preference number: 4 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKGAGQR*LGPPCT
Trigger: TGTGCAGGGTGGACCCAGGCACCTCTGCCCAGCGCC...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp GAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCTCGGGCCACGTCATGTaGATGCCGTGCCAATACTGT +
Preference number: 4 (lower is better)
Translates to: ESYLEKVQMASILARPTASGHVM*MPCQYC
Trigger: ACAGTATTGGCACGGCATGCACATGACGTGGCCCGA...GGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCTCGGGCCACGTCATGTaGATGCCGTGCCAATACTGT +
Preference number: 4 (lower is better)
Translates to: PQRAGIAGLQIFALHSRVSGHVM*MPCQYC
Trigger: ACAGTATTGGCACGGCATGCACATGACGTGGCCCGA...GACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CTTCCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTCACTTCACCAGCAAGGTCACCTaGTGTCCACTCTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LPGELVVSELLHTDPIHFTSKVT*CPLCQS
Trigger: GCTTTGGCAGAGTGGACAGCAGGTGACCTTGCTGGT...GAAGTGAATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR GCA 90 bp TGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCGTCGGAAGCCATAGCTaGCACCAGGCCCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: CITLKGPGVISRKGPDGFVGSHS*HQAQGT
Trigger: TGTACCCTGGGCCTGGTGGCAGCTATGGCTTCCGAC...GAAGCCATCTGGACCTTTTCTAGATATGACTCCAGGACCCTTGAGTGTAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp AATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTGTCCCTTCACACCACTaGCCCTTACCCCCACCAACA +
Preference number: 4 (lower is better)
Translates to: NAKAPTEGRHSWSPNFCIVPSHH*PLPPPT
Trigger: TGTTGGTGGGGGTAAGGGGCAGTGGTGTGAAGGGAC...AATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTCACTTCCAGACCTGCTGTCCACTCTaGCAAAGCTTCCTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: PGELVVSELLHTDPIHFQTCCPL*QSFLVS
Trigger: ACTCACCAGGAAGCTTTGGCAGAGTGGACAGCAGGT...CTGGAAGTGAATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR GCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCGGGATAGGGAATGGTTaGCAGGGGGTGAGGGAGTTA +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLGIGNG*QGVREL
Trigger: TAACTCCCTCACCCCCTGGCAACCATTCCCTATCCC...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR GCA 90 bp GAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCTGTGTCCTGATAGGGTaGTGGGCAGTTTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ESYLEKVQMASILARPTACVLIG*WAVSAW
Trigger: CCAGGCAGAAACTGCCCAGCACCCTATCAGGACACA...GGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR CCA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACACTGTTCTTCCACCTCTaGCCCTGCCACCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SYLEKVQMASILARPTATLFFHL*PCHQQG
Trigger: ACCTTGCTGGTGGCAGGGCCAGAGGTGGAAGAACAG...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACAAGGAACCCAAAACCCTaGGGCCCTTTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SYLEKVQMASILARPTATRNPKP*GPFSRC
Trigger: GCACCTGGAGAAAGGGCCCCAGGGTTTTGGGTTCCT...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp ATTTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGAGGAACCCAAAACCCTaGGGCCCTTTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ISITNATVTKHHPPAMLRRNPKP*GPFSRC
Trigger: GCACCTGGAGAAAGGGCCCCAGGGTTTTGGGTTCCT...CCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp AGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGACCCAGCCTTCTTGGCTaGCAGTCCCGGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: SWSPNFCITLKGPGVISRPSLLG*QSRVHL
Trigger: GAGGTGGACCCGGGACTGCCAGCCAAGAAGGCTGGG...TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCCTCCAAGAAGAGGAGTaGGGACAGGCGAACCATGCT +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLLQEEE*GQANHA
Trigger: AGCATGGTTCGCCTGTCCCCACTCCTCTTCTTGGAG...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp TTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACTCCAAGAAGAGGAGTaGGGACAGGCGAACCATGCT +
Preference number: 4 (lower is better)
Translates to: FYNKCNGDQAPPSRNAKALQEEE*GQANHA
Trigger: AGCATGGTTCGCCTGTCCCCACTCCTCTTCTTGGAG...TGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp ATTTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCCAGCCTGTGATCGGTaGTGTCTGAGTCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: ISITNATVTKHHPPAMLRPACDR*CLSPSG
Trigger: ACCAGAGGGACTCAGACACCACCGATCACAGGCTGG...CCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp AGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGACAGGGTCGACGACAGTaGGGGAGACACAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SWSPNFCITLKGPGVISRQGRRQ*GRHRSP
Trigger: AGGGCTCCTGTGTCTCCCTCACTGTCGTCGACCCTG...TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp AGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAACCTGGGCCAGCCTGTaGTCGGTGGTGTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SWSPNFCITLKGPGVISRTWASL*SVVSES
Trigger: GGACTCAGACACCACCGATCACAGGCTGGCCCAGGT...TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACACAGAGGGAGACCGAGTaGGTGGTTACCAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: SYLEKVQMASILARPTATQRETE*VVTKEI
Trigger: GATCTCCTTGGTAACCACTCACTCGGTCTCCCTCTG...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR GCA 90 bp GCAATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCAGTCATGTGCATGCCGTaGCAATACTGTCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: AMLRHPQRAGIAGLQIFAVMCMP*QYCQQH
Trigger: GTGTTGCTGACAGTATTGGCACGGCATGCACATGAC...TGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACAGCCACGTCATGTGCATaGCGTGCCAATACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SYLEKVQMASILARPTATATSCA*RANTVS
Trigger: GCTGACAGTATTGGCACGGCATGCACATGACGTGGC...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp AATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACCAGCAAGGTCACCTaGTGTCCACTCTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: NAKAPTEGRHSWSPNFCITSKVT*CPLCQS
Trigger: GCTTTGGCAGAGTGGACAGCAGGTGACCTTGCTGGT...AATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTGTACCAAGCAGGGGTaGTCTACAGTAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: LRHPQRAGIAGLQIFALHCTKQG*STVDPR
Trigger: CCTCGGATCTACTGTAGAGCACCCCTGCTTGGTACA...GTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTTAGAGAGAGCATCCTaGCTTCACCACCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LRHPQRAGIAGLQIFALHLERAS*LHHLRL
Trigger: CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAA...GTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp AGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGATCCAACCACACCCTCTaGTGGCAGGTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SWSPNFCITLKGPGVISRSNHTL*WQVGLQ
Trigger: CTGCAGGCCCACCTGCCAGCAGAGGGTGTGGTTGGA...TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp AGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAGACACTGTCTCCTCATaGCCCAGCCCCTCCACGCTC +
Preference number: 4 (lower is better)
Translates to: SWSPNFCITLKGPGVISRDTVSS*PSPSTL
Trigger: GAGCGTGGAGGGGCTGGGCCATGAGGAGACAGTGTC...TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp AACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCAGGCATAGCTaGTCTCCAAATTTTTGCATT +
Preference number: 4 (lower is better)
Translates to: NKCNGDQAPPSRNAKAPTEGRHS*SPNFCI
Trigger: AATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTC...TGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp TGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCAGCCTGAGGCCCTTTTaGTCCCTTCACACCACTGCC +
Preference number: 4 (lower is better)
Translates to: CITLKGPGVISRKGPDGFSLRPF*SLHTTA
Trigger: GGCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCT...GAAGCCATCTGGACCTTTTCTAGATATGACTCCAGGACCCTTGAGTGTAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACAGTCCTGATAGGGTGCTaGGCAGTTTCTGCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SYLEKVQMASILARPTATVLIGC*AVSAWL
Trigger: CAACCAGGCAGAAACTGCCCAGCACCCTATCAGGAC...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR TCA 90 bp AGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAGAGTCACCTGGGAGATaGAGAGACGAGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: SWSPNFCITLKGPGVISRESPGR*RDEAHW
Trigger: CCAGTGGGCCTCGTCTCTTCATCTCCCAGGTGACTC...TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACAAGACACGGTAGCCCCTaGGTATGTCTGTACCAAGCA +
Preference number: 4 (lower is better)
Translates to: SYLEKVQMASILARPTATRHGSP*VCLYQA
Trigger: TGCTTGGTACAGACATACTCAGGGGCTACCGTGTCT...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp CCAAAGCTTCCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTCTGGTGAGTTGGTTGTaGGTGAACTTCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: PKLPGELVVSELLHTDPILVSWL*VNFSTL
Trigger: CAGTGTGGAGAAGTTCACTCACAACCAACTCACCAG...AATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGGAAGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR GCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCGTCATGTGCATGCCGTaGCAATACTGTCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLVMCMP*QYCQQH
Trigger: GTGTTGCTGACAGTATTGGCACGGCATGCACATGAC...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCGCCACGTCATGTGCATaGCGTGCCAATACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: CITLKGPGVISRKGPDGFATSCA*RANTVS
Trigger: GCTGACAGTATTGGCACGGCATGCACATGACGTGGC...GAAGCCATCTGGACCTTTTCTAGATATGACTCCAGGACCCTTGAGTGTAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAAATCACGTCTCCCACTTaGAGCCCAGCCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKITSPT*SPARAA
Trigger: AGCTGCCCGGGCTGGGCTGCAAGTGGGAGACGTGAT...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAACAGAGCCCAGTCCTCTaGAGCCCCAGGGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKQSPVL*SPRGNP
Trigger: TGGATTCCCCCTGGGGCTGCAGAGGACTGGGCTCTG...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACTGGTCTCCAAATTTTTaGATTACACTCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SVVSESLWSGLERASCLHWSPNF*ITLKGP
Trigger: AGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCA...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGATCAATGCCCAGCTTTaGGTTAAACTTAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: ESLWSGLERASCLHHLRLINAQL*VKLKLQ
Trigger: CTGAAGTTTAAGTTTAACCCAAAGCTGGGCATTGAT...CAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CCA 90 bp GAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCCCATATGACATCCTCTaGAGCCTCAGACTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ESYLEKVQMASILARPTAPYDIL*SLRLLQ
Trigger: CTGAAGGAGTCTGAGGCTCCAGAGGATGTCATATGG...GGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCAGTCAGATTTATaGCGAATGGCCATTTCTATA +
Preference number: 4 (lower is better)
Translates to: VSESLWSGLERASCLHHLRQSDL*RMAISI
Trigger: TATAGAAATGGCCATTCGCCATAAATCTGACTGCCT...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp AGGCTGGAGAGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGATGTGCCTCTTCCATTaGCATAAACTAAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: RLESEDTVAPEYVCTKQGMCLFH*HKLKGL
Trigger: GAGTCCTTTTAGTTTATGCCAATGGAAGAGGCACAT...CCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACTCTCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR TCA 90 bp AATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTCTGGTGAGTTGGTTGTaGGTGAACTTCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: NAKAPTEGRHSWSPNFCILVSWL*VNFSTL
Trigger: CAGTGTGGAGAAGTTCACTCACAACCAACTCACCAG...AATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CTTCCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTCACTTCGGAAGCCAAAACTCTTaGCCTCCTCTTTGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: LPGELVVSELLHTDPIHFGSQNS*PPLCSV
Trigger: TACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCC...GAAGTGAATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR GCA 90 bp AATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTGTCATGTGCATGCCGTaGCAATACTGTCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: NAKAPTEGRHSWSPNFCIVMCMP*QYCQQH
Trigger: GTGTTGCTGACAGTATTGGCACGGCATGCACATGAC...AATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp AGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGATCATCTTTCACTATGTaGCACAGCCGGGGCCGGACC +
Preference number: 4 (lower is better)
Translates to: SWSPNFCITLKGPGVISRSSFTM*HSRGRT
Trigger: GGTCCGGCCCCGGCTGTGCCACATAGTGAAAGATGA...TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp ATTTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGTCTAAAACTCCCATATaGCATCCTCTGGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ISITNATVTKHHPPAMLRSKTPI*HPLEPQ
Trigger: CTGAGGCTCCAGAGGATGTCATATGGGAGTTTTAGA...CCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TACCCCCACCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTGGAAGCCAAAACTCTTaGCCTCCTCTTTGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: YPHQHKHRQSDLWRMAISGSQNS*PPLCSV
Trigger: TACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCC...AGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGGTGGGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACAGGAAGCCAAAACTCTTaGCCTCCTCTTTGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: SYLEKVQMASILARPTATGSQNS*PPLCSV
Trigger: TACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCC...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp ATTTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCAGACATCTCAGTTCTaGGTTGACCCATTATCCCTG +
Preference number: 4 (lower is better)
Translates to: ISITNATVTKHHPPAMLRQTSQF*VDPLSL
Trigger: CAGGGATAATGGGTCAACCCAGAACTGAGATGTCTG...CCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp AGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAAGACACGGTAGCCCCTaGGTATGTCTGTACCAAGCA +
Preference number: 4 (lower is better)
Translates to: SWSPNFCITLKGPGVISRRHGSP*VCLYQA
Trigger: TGCTTGGTACAGACATACTCAGGGGCTACCGTGTCT...TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR TCA 90 bp CCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCTCATTACTTTTCTCCTaGCTTGTTTACCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PQRAGIAGLQIFALHSRVSLLFS*LVYLPQ
Trigger: CTGAGGCAGGTAAACAAGTCAGGAGAAAAGTAATGA...GACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR GCA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAAAACGAGGCTGTGTCCTaGAGATCTGCGGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKNEAVS*RSAAFS
Trigger: GGAGAAAGCCGCAGATCTGCAGGACACAGCCTCGTT...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322712.4
ENST00000355547.10
CDS-3UTR GCA 90 bp ATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAAACGAGGCTGTGTCCTaGAGATCTGCGGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: IAGLQIFALHSRVLESYLNEAVS*RSAAFS
Trigger: GGAGAAAGCCGCAGATCTGCAGGACACAGCCTCGTT...TAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322712.4
ENST00000355547.10
CDS-3UTR GCA 90 bp AGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGACACACAGGACTATTGTaGGGTCCCCTCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SWSPNFCITLKGPGVISRHTGLL*GPLPFS
Trigger: AGAGAAAGGGAGGGGACCGCACAATAGTCCTGTGTG...TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR CCA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAACTCCAAGAAGAGGAGTaGGGACAGGCGAACCATGCT +
Preference number: 4 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKLQEEE*GQANHA
Trigger: AGCATGGTTCGCCTGTCCCCACTCCTCTTCTTGGAG...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAAGCAGAGGATTTCTCCTaGCCTCCTACCTGCGGCTTT +
Preference number: 4 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKAEDFS*PPTCGF
Trigger: AAAGCCGCAGGTAGGAGGCCAGGAGAAATCCTCTGC...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR TCA 90 bp AATGCTAAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTTTGACCCATTATCCCTaGGATTCAGTGATTGATAGG +
Preference number: 4 (lower is better)
Translates to: NAKAPTEGRHSWSPNFCILTHYP*DSVIDR
Trigger: CCTATCAATCACTGAATCTCAGGGATAATGGGTCAA...AATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTTAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp CCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCATTTCTATAACAAATaGAACGGTGACCAAGCACCA +
Preference number: 4 (lower is better)
Translates to: PQRAGIAGLQIFALHSRVHFYNK*NGDQAP
Trigger: TGGTGCTTGGTCACCGTTGCATTTGTTATAGAAATG...GACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCAGGCAGTCAGATTTATaGCGAATGGCCATTTCTATA +
Preference number: 4 (lower is better)
Translates to: ESYLEKVQMASILARPTARQSDL*RMAISI
Trigger: TATAGAAATGGCCATTCGCCATAAATCTGACTGCCT...GGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp AAGGCACCCACAGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACACTCATCAATGCCCAGCTTTaGGTTAAACTTAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: KAPTEGRHSWSPNFCITLINAQL*VKLKLQ
Trigger: CTGAAGTTTAAGTTTAACCCAAAGCTGGGCATTGAT...GAGTGTAATGCAAAAATTTGGAGACCAGCTATGCCTGCCCTCTGTGGGTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp GAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCATCAATGCCCAGCTTTaGGTTAAACTTAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: ESYLEKVQMASILARPTAINAQL*VKLKLQ
Trigger: CTGAAGTTTAAGTTTAACCCAAAGCTGGGCATTGAT...GGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp CCAAAGCTTCCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTATCAATGCCCAGCTTTaGGTTAAACTTAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: PKLPGELVVSELLHTDPIINAQL*VKLKLQ
Trigger: CTGAAGTTTAAGTTTAACCCAAAGCTGGGCATTGAT...AATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGGAAGCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR CCA 90 bp ATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGTCCTGCAGATCTACTaGGCAAAGAAGTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: IAGLQIFALHSRVLESYLVLQIY*AKKWVR
Trigger: TCTCACCCACTTCTTTGCCCAGTAGATCTGCAGGAC...TAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR TCA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAATCTAAAACTCCCATATaGCATCCTCTGGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKSKTPI*HPLEPQ
Trigger: CTGAGGCTCCAGAGGATGTCATATGGGAGTTTTAGA...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR GCA 90 bp TGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCTGGTCTCCAAATTTTTaGATTACACTCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: CITLKGPGVISRKGPDGFWSPNF*ITLKGP
Trigger: AGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCA...GAAGCCATCTGGACCTTTTCTAGATATGACTCCAGGACCCTTGAGTGTAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAACAGACATCTCAGTTCTaGGTTGACCCATTATCCCTG +
Preference number: 4 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKQTSQF*VDPLSL
Trigger: CAGGGATAATGGGTCAACCCAGAACTGAGATGTCTG...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CCA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAATATCAGTACAGGGTGTaGACCAGGAAGACAGACATA +
Preference number: 4 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKYQYRV*TRKTDI
Trigger: TATGTCTGTCTTCCTGGTCCACACCCTGTACTGATA...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR GCA 90 bp ATAGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTATGGTCTCCAAATTTTTaGATTACACTCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IAGLQIFALHSRVLESYLWSPNF*ITLKGP
Trigger: AGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCA...TAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS GCA 90 bp CGGTCCGCCTCAGGGTCGACGACAGTGAGGGAGACACAGGAGCCCTaGCCCTGGATCCTGGACACTGTCTCCTCATGGCCCAGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: RSASGSTTVRETQEP*PWILDTVSSWPSPS
Trigger: GGAGGGGCTGGGCCATGAGGAGACAGTGTCCAGGATCCAGGGGCAGGGCTCCTGTGTCTCCCTCACTGTCGTCGACCCTGAGGCGGACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS GCA 90 bp CCAGGATCCTGTCTCCTTCCTGAAGACCCTGGCGCTGGGCAGAGGTaGCTGGGTCCACCCTGCACACCACATGCCCAGCCCTGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: PGSCLLPEDPGAGQR*LGPPCTPHAQPCPA
Trigger: AGCTGGGCAGGGCTGGGCATGTGGTGTGCAGGGTGGACCCAGGCACCTCTGCCCAGCGCCAGGGTCTTCAGGAAGGAGACAGGATCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000533688.5
ENST00000534790.5
CDS CCA 90 bp GATCCTGTCTCCTTCCTGAAGACCCTGGCGCTGGGCAGAGGTGCCTaGGTCCACCCTGCACACCACATGCCCAGCCCTGCCCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: DPVSFLKTLALGRGA*VHPAHHMPSPAQLL
Trigger: CAGGAGCTGGGCAGGGCTGGGCATGTGGTGTGCAGGGTGGACCCAGGCACCTCTGCCCAGCGCCAGGGTCTTCAGGAAGGAGACAGGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000533688.5
ENST00000534790.5
CDS GCA 90 bp GGGCAGAGGTGCCTGGGTCCACCCTGCACACCACATGCCCAGCCCTaGCCAGCTCCTGCTGCAGGTGGAAGCCAAAACTCTTGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: GQRCLGPPCTPHAQP*PAPAAGGSQNSCPP
Trigger: AGGAGGGCAAGAGTTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAGGGCTGGGCATGTGGTGTGCAGGGTGGACCCAGGCACCTCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000533688.5
ENST00000534790.5
CDS-3UTR CAA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTTGCATCCCAGCCTTCTaGGCTGGCAGTCCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: PAGREGAPGPACDRWCLSCIPAF*AGSPGS
Trigger: GGACCCGGGACTGCCAGCCAAGAAGGCTGGGATGCA...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS GCA 90 bp GGCATCTTCTCCCAGCTGAGCTCGGGCCACGTCATGTGCATGCCGTaGCAATACTGTCAGCAACACCCGAGGGCTGCTGGCCCGGATGCG +
Preference number: 5 (lower is better)
Translates to: GIFSQLSSGHVMCMP*QYCQQHPRAAGPDA
Trigger: CGCATCCGGGCCAGCAGCCCTCGGGTGTTGCTGACAGTATTGGCACGGCATGCACATGACGTGGCCCGAGCTCAGCTGGGAGAAGATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS CCA 90 bp AGGGGGAGGAGAGGGCACAGCCCAAGTACAGGTTCGCCGTGTGCCTaGCAGACCCTGTGTCCTGATAGGGTGCTGGGCAGTTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: RGRRGHSPSTGSPCA*QTLCPDRVLGSFCL
Trigger: CAGGCAGAAACTGCCCAGCACCCTATCAGGACACAGGGTCTGCCAGGCACACGGCGAACCTGTACTTGGGCTGTGCCCTCTCCTCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000526279.5
ENST00000527308.5
ENST00000529573.1
ENST00000531114.5
ENST00000534790.5
CDS CCA 90 bp GCCCCGGGGCGAGGCGGGAGCCTCTGTGTTCTCCAAGAAGAGGAGTaGGGACAGGCGAACCTGGAAGGTGGCAGGGAGAGCAAATCTTTC +
Preference number: 5 (lower is better)
Translates to: APGRGGSLCVLQEEE*GQANLEGGRESKSF
Trigger: GAAAGATTTGCTCTCCCTGCCACCTTCCAGGTTCGCCTGTCCCCACTCCTCTTCTTGGAGAACACAGAGGCTCCCGCCTCGCCCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529098.5
CDS GCA 90 bp GCCCAGCCCTGCCCAGCTCCTGCTGCAGGTGGAAGCCAAAACTCTTaGCCTCCTCTTTGCTCAGTAAACAGAAGCGAGGCCGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: AQPCPAPAAGGSQNS*PPLCSVNRSEAAPG
Trigger: GCCTGGAGCGGCCTCGCTTCTGTTTACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAGGGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000526279.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000533688.5
ENST00000534790.5
CDS GCA 90 bp CCTGGGTCCACCCTGCACACCACATGCCCAGCCCTGCCCAGCTCCTaGTGCAGGTGGAAGCCAAAACTCTTGCCCTCCTCTTTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: PGSTLHTTCPALPSS*CRWKPKLLPSSLLS
Trigger: ACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAGGGCTGGGCATGTGGTGTGCAGGGTGGACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000526279.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000533688.5
ENST00000534790.5
CDS GCA 90 bp ACAGAGGTGGGCATCTTCTCCCAGCTGAGCTCGGGCCACGTCATGTaGATGCCGTGCCAATACTGTCAGCAACACCCGAGGGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: TEVGIFSQLSSGHVM*MPCQYCQQHPRAAG
Trigger: GCCAGCAGCCCTCGGGTGTTGCTGACAGTATTGGCACGGCATGCACATGACGTGGCCCGAGCTCAGCTGGGAGAAGATGCCCACCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS CCA 90 bp AGATCGGAGGCCGTGTGGAGCCGTGGTGCCTCCAGGGATAGGGAATaGTTGCCAGGGGGTGAGGGAGTTACCATAGGGGTCGTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RSEAVWSRGASRDRE*LPGGEGVTIGVVVF
Trigger: GAAGACCACGACCCCTATGGTAACTCCCTCACCCCCTGGCAACCATTCCCTATCCCTGGAGGCACCACGGCTCCACACGGCCTCCGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000525131.5
ENST00000526279.5
ENST00000526836.1
ENST00000527308.5
ENST00000529573.1
ENST00000531114.5
ENST00000534790.5
CDS-3UTR CAA 90 bp TCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGTGCATCCCAGCCTTCTaGGCTGGCAGTCCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: SLWSGLERASCLHHLRLECIPAF*AGSPGS
Trigger: GGACCCGGGACTGCCAGCCAAGAAGGCTGGGATGCA...CTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS TCA 90 bp GCGGCCCAGGGCCAGAGCTCAGACAGGGACACCTCTTCGGTGCACTaGAAGGTGTATATACGCTTGTGTGCCCACCCCAAGGCCCACCTT +
Preference number: 5 (lower is better)
Translates to: AAQGQSSDRDTSSVH*KVYIRLCAHPKAHL
Trigger: AAGGTGGGCCTTGGGGTGGGCACACAAGCGTATATACACCTTTCAGTGCACCGAAGAGGTGTCCCTGTCTGAGCTCTGGCCCTGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527028.5
ENST00000529098.5
ENST00000534790.5
CDS GCA 90 bp CGTCATGTGCATGCCGTGCCAATACTGTCAGCAACACCCGAGGGCTaGTGGCCCGGATGCGGCGTACCACCACCGCATAGTCTTCGTGTT +
Preference number: 5 (lower is better)
Translates to: RHVHAVPILSATPEG*WPGCGVPPPHSLRV
Trigger: AACACGAAGACTATGCGGTGGTGGTACGCCGCATCCGGGCCAGCAGCCCTCGGGTGTTGCTGACAGTATTGGCACGGCATGCACATGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS GCA 90 bp CTTCAAGTGAAGGGTCCTCTGTCTCAACCAGTGAGGCTGAGCTGCTaGCCCGGGGCGAGGCGGGAGCCTCTGTGTTCTCCAAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: LQVKGPLSQPVRLSC*PGARREPLCSPRRG
Trigger: TCCTCTTCTTGGAGAACACAGAGGCTCCCGCCTCGCCCCGGGGCAGCAGCTCAGCCTCACTGGTTGAGACAGAGGACCCTTCACTTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS-3UTR CAA 90 bp GCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCGGACAGAAGGCACGCTaGTGTCTTCAAGTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: AGREGAPGPACDRWCLSPGQKAR*CLQVKG
Trigger: ACCCTTCACTTGAAGACACAAGCGTGCCTTCTGTCC...GGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CAA 90 bp GTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCAGGCATAGAGCCTGAGGCCCTTTaGGTCCCTTCACACCACTGC +
Preference number: 5 (lower is better)
Translates to: VTKHHPPAMLRHPQRAGIEPEAL*VPSHHC
Trigger: GCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTC...TATGCCTGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CAA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCGCCGCATCCCACCCCTaGAGCCTGAGGCCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: VSESLWSGLERASCLHHLAASHP*SLRPFW
Trigger: CCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS GCA 90 bp TGTCTTCAAGTGAAGGGTCCTCTGTCTCAACCAGTGAGGCTGAGCTaGTGCCCCGGGGCGAGGCGGGAGCCTCTGTGTTCTCCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: CLQVKGPLSQPVRLS*CPGARREPLCSPRR
Trigger: TCTTCTTGGAGAACACAGAGGCTCCCGCCTCGCCCCGGGGCAGCAGCTCAGCCTCACTGGTTGAGACAGAGGACCCTTCACTTGAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS CCA 90 bp CTGTGTCCTGATAGGGTGCTGGGCAGTTTCTGCCTGGTTGGGTGTTaGGTGGTGGGGTTCGTGGGCAGAGGGACTGGGACAGGAGAAAAC +
Preference number: 5 (lower is better)
Translates to: LCPDRVLGSFCLVGC*VVGFVGRGTGTGEN
Trigger: GTTTTCTCCTGTCCCAGTCCCTCTGCCCACGAACCCCACCACCCAACACCCAACCAGGCAGAAACTGCCCAGCACCCTATCAGGACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000526279.5
ENST00000526836.1
ENST00000527308.5
ENST00000529573.1
ENST00000531114.5
ENST00000534790.5
CDS CCA 90 bp CTGTGTTCTCCAAGAAGAGGAGTGGGGACAGGCGAACCTGGAAGGTaGCAGGGAGAGCAAATCTTTCGGACCTCAGCCCTGCCCCACTCC +
Preference number: 5 (lower is better)
Translates to: LCSPRRGVGTGEPGR*QGEQIFRTSALPHS
Trigger: GGAGTGGGGCAGGGCTGAGGTCCGAAAGATTTGCTCTCCCTGCCACCTTCCAGGTTCGCCTGTCCCCACTCCTCTTCTTGGAGAACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529098.5
CDS CCA 90 bp GGAGCCTCTGTGTTCTCCAAGAAGAGGAGTGGGGACAGGCGAACCTaGAAGGTGGCAGGGAGAGCAAATCTTTCGGACCTCAGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: GASVFSKKRSGDRRT*KVAGRANLSDLSPA
Trigger: GGCAGGGCTGAGGTCCGAAAGATTTGCTCTCCCTGCCACCTTCCAGGTTCGCCTGTCCCCACTCCTCTTCTTGGAGAACACAGAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529098.5
CDS-3UTR CAA 90 bp AACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACATGCATCCCAGCCTTCTaGGCTGGCAGTCCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: NKCNGDQAPPSRNAKAPTCIPAF*AGSPGS
Trigger: GGACCCGGGACTGCCAGCCAAGAAGGCTGGGATGCA...TGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CAA 90 bp GGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTGGACAGAAGGCACGCTaGTGTCTTCAAGTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: GAPGPACDRWCLSPSGLAGQKAR*CLQVKG
Trigger: ACCCTTCACTTGAAGACACAAGCGTGCCTTCTGTCC...AGCCAGACCAGAGGGACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CAA 90 bp AACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGCCGCATCCCACCCCTaGAGCCTGAGGCCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: NKCNGDQAPPSRNAKAPTAASHP*SLRPFW
Trigger: CCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC...TGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS GCA 90 bp AGTGAAGACACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGTaGTCTACAGTAGATCCGAGGCCAGAGCCCAGTCCTCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SEDTVAPEYVCTKQG*STVDPRPEPSPLQP
Trigger: GGGCTGCAGAGGACTGGGCTCTGGCCTCGGATCTACTGTAGAGCACCCCTGCTTGGTACAGACATACTCAGGGGCTACCGTGTCTTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS GCA 90 bp CCAGCTCCTGCTGCAGGTGGAAGCCAAAACTCTTGCCCTCCTCTTTaGTCAGTAAACAGAAGCGAGGCCGCTCCAGGCTCCAGGGATCTG +
Preference number: 5 (lower is better)
Translates to: PAPAAGGSQNSCPPL*SVNRSEAAPGSRDL
Trigger: CAGATCCCTGGAGCCTGGAGCGGCCTCGCTTCTGTTTACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCACCTGCAGCAGGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526279.5
ENST00000531114.5
ENST00000534790.5
CDS GCA 90 bp GGTCCACCTCCCACAGGAACTGTCCTGGGGCATAGACATCCTCACTaGTCCTCTCCAGCTATCCTAGGCCACTGTGTACACACCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GPPPTGTVLGHRHPH*SSPAILGHCVHTRG
Trigger: TCCCCTGGTGTGTACACAGTGGCCTAGGATAGCTGGAGAGGAGCAGTGAGGATGTCTATGCCCCAGGACAGTTCCTGTGGGAGGTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527028.5
ENST00000529098.5
ENST00000534790.5
CDS-3UTR CAA 90 bp CCTGCAGGAAGGGAGGGAGCACCTGGGCCAGCCTGTGATCGGTGGTGTCTGAGTTGGAAGCCAAAACTCTaGCCCTCCTCTTTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: PAGREGAPGPACDRWCLSWKPKL*PSSLLS
Trigger: ACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCA...ACTCAGACACCACCGATCACAGGCTGGCCCAGGTGCTCCCTCCCTTCCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CAA 90 bp TCGGTGGTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACGAGCCTGAGGCCCTTTaGGTCCCTTCACACCACTGC +
Preference number: 5 (lower is better)
Translates to: SVVSESLWSGLERASCLHEPEAL*VPSHHC
Trigger: GCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTC...GTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACACCACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CAA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAAGGGATAGGGAATGGTaGCCAGGGGGTGAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: VPLVWLRESILPSPPQAGRDREW*PGGEGV
Trigger: AACTCCCTCACCCCCTGGCAACCATTCCCTATCCCT...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525131.5
ENST00000531114.5
CDS GCA 90 bp CCAGCTCCTGCTGCAGGTGGAAGCCAAAACTCTTGCCCTCCTCTTTaGTCAGTAAACAGAAGCGAGGCCGCTCCAGGCTCCAGGGATCAT +
Preference number: 5 (lower is better)
Translates to: PAPAAGGSQNSCPPL*SVNRSEAAPGSRDH
Trigger: ATGATCCCTGGAGCCTGGAGCGGCCTCGCTTCTGTTTACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCACCTGCAGCAGGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000533688.5
CDS GCA 90 bp CCAGCTCCTGCTGCAGGTGGAAGCCAAAACTCTTGCCCTCCTCTTTaGTCAGTAAACAGAAGCGAGGCCGCTCCAGGCTCCAGGGATCAA +
Preference number: 5 (lower is better)
Translates to: PAPAAGGSQNSCPPL*SVNRSEAAPGSRDQ
Trigger: TTGATCCCTGGAGCCTGGAGCGGCCTCGCTTCTGTTTACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCACCTGCAGCAGGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525131.5
CDS CCA 90 bp CCTGCAAGGAGGCAGGGGAAGCAGGTACAAGCTGGCAGCTGGACTTaGGTCCCAGGATCTCCTTTAGGTGCTAATGGCAGTGAAGCGCTT +
Preference number: 5 (lower is better)
Translates to: PARRQGKQVQAGSWT*VPGSPLGANGSEAL
Trigger: AAGCGCTTCACTGCCATTAGCACCTAAAGGAGATCCTGGGACCCAAGTCCAGCTGCCAGCTTGTACCTGCTTCCCCTGCCTCCTTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529573.1
CDS-3UTR CAA 90 bp AACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGCCTGAGGCCCTTTaGGTCCCTTCACACCACTGC +
Preference number: 5 (lower is better)
Translates to: NKCNGDQAPPSRNAKAPTEPEAL*VPSHHC
Trigger: GCAGTGGTGTGAAGGGACCAAAAGGGCCTCAGGCTC...TGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CAA 90 bp GTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACCCACAGAGGGCAGGCATAATACACACAGGACTATaGTGCGGTCCCCTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: VTKHHPPAMLRHPQRAGIIHTGL*CGPLPF
Trigger: GAAAGGGAGGGGACCGCACAATAGTCCTGTGTGTAT...TATGCCTGCCCTCTGTGGGTGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS CCA 90 bp TGCAGAACAGGGGACACCGGGGGAAAGTTTGCTGGCTTTAGGCTCTaGGAGGGAAGCAGAGGAAGACCGATCAGGCAGCAAAGGATCGAA +
Preference number: 5 (lower is better)
Translates to: CRTGDTGGKFAGFRL*EGSRGRPIRQQRIE
Trigger: TTCGATCCTTTGCTGCCTGATCGGTCTTCCTCTGCTTCCCTCCCAGAGCCTAAAGCCAGCAAACTTTCCCCCGGTGTCCCCTGTTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534790.5
CDS-3UTR CAA 90 bp GAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCGCCGCATCCCACCCCTaGAGCCTGAGGCCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: ESYLEKVQMASILARPTAAASHP*SLRPFW
Trigger: CCAAAAGGGCCTCAGGCTCAAGGGGTGGGATGCGGC...GGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS GCA 90 bp GTCCCAGGATCTCCTTTAGGTGCTAATGGCAGTGAAGCGCTTCGCTaGCTCCAATTATTTCCTCCCCTTGCCCCAACCCTCGTGGCACTT +
Preference number: 5 (lower is better)
Translates to: VPGSPLGANGSEALR*LQLFPPLAPTLVAL
Trigger: AAGTGCCACGAGGGTTGGGGCAAGGGGAGGAAATAATTGGAGGCAGCGAAGCGCTTCACTGCCATTAGCACCTAAAGGAGATCCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529573.1
CDS CCA 90 bp AGCAAAGGATCGAAGGGATTCAAGATCCATGGGGCATCAGTCACCTaGGAGATGAAGAGACGAGGCCCACTGGCCACACAACTGAGTCGG +
Preference number: 5 (lower is better)
Translates to: SKGSKGFKIHGASVT*EMKRRGPLATQLSR
Trigger: CCGACTCAGTTGTGTGGCCAGTGGGCCTCGTCTCTTCATCTCCCAGGTGACTGATGCCCCATGGATCTTGAATCCCTTCGATCCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534790.5
CDS-3UTR CAA 90 bp CCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGAGAGTGGAAGCCAAAACTCTaGCCCTCCTCTTTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: PLVWLRESILPSPPQAGEWKPKL*PSSLLS
Trigger: ACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCA...CTCTCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CAA 90 bp GTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAGGCTGGATGGAAGCCAAAACTCTaGCCCTCCTCTTTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: VPLVWLRESILPSPPQAGWKPKL*PSSLLS
Trigger: ACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCA...TCCAGCCTGAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS-3UTR CAA 90 bp CTGGAGTCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACATGCATCCCAGCCTTCTaGGCTGGCAGTCCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: LESYLEKVQMASILARPTCIPAF*AGSPGS
Trigger: GGACCCGGGACTGCCAGCCAAGAAGGCTGGGATGCA...TGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS CCA 90 bp AAACTTCCTGCAAGGAGGCAGGGGAAGCAGGTACAAGCTGGCAGCTaGACTTGGGTCCCAGGATCTCCTTTAGGTGCTAATGGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: KLPARRQGKQVQAGS*TWVPGSPLGANGSE
Trigger: TTCACTGCCATTAGCACCTAAAGGAGATCCTGGGACCCAAGTCCAGCTGCCAGCTTGTACCTGCTTCCCCTGCCTCCTTGCAGGAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529573.1
CDS-3UTR CAA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCAAGCTTCCTGGTGAGTaGGTTGTGAGTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: VSESLWSGLERASCLHHLKLPGE*VVSELL
Trigger: GAGAAGTTCACTCACAACCAACTCACCAGGAAGCTT...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355547.10
ENST00000525131.5
ENST00000531114.5
CDS CCA 90 bp GTGGTCTTCGGCCAGGGAGAGGACAGGATTATCAATGCCCAGCTTTaGGTTAAACTTAAACTTCCTGCAAGGAGGCAGGGGAAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: VVFGQGEDRIINAQL*VKLKLPARRQGKQV
Trigger: TACCTGCTTCCCCTGCCTCCTTGCAGGAAGTTTAAGTTTAACCCAAAGCTGGGCATTGATAATCCTGTCCTCTCCCTGGCCGAAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529573.1
CDS-3UTR CAA 90 bp GTGTCTGAGTCCCTCTGGTCTGGCTTAGAGAGAGCATCCTGCCTTCACCACCTCCTGGTCTCCAAATTTTaGCATTACACTCAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: VSESLWSGLERASCLHHLLVSKF*HYTQGS
Trigger: GGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAG...GAGGTGGTGAAGGCAGGATGCTCTCTCTAAGCCAGACCAGAGGGACTCAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CAA 90 bp CCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTCACTTCCAGTGGAAGCCAAAACTCTaGCCCTCCTCTTTGCTCAGT +
Preference number: 5 (lower is better)
Translates to: PGELVVSELLHTDPIHFQWKPKL*PSSLLS
Trigger: ACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCA...CTGGAAGTGAATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR CAA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACAGGACAGAAGGCACGCTaGTGTCTTCAAGTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: SYLEKVQMASILARPTATGQKAR*CLQVKG
Trigger: ACCCTTCACTTGAAGACACAAGCGTGCCTTCTGTCC...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CAA 90 bp ATTTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGTGTTCCACAACATCATaGTTCACCGCCAGGATCCTG +
Preference number: 5 (lower is better)
Translates to: ISITNATVTKHHPPAMLRCSTTS*FTARIL
Trigger: CAGGATCCTGGCGGTGAACAATGATGTTGTGGAACA...CCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CAA 90 bp CCAAAGCTTCCTGGTGAGTTGGTTGTGAGTGAACTTCTCCACACTGACCCCATTAAGCTTCCTGGTGAGTaGGTTGTGAGTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: PKLPGELVVSELLHTDPIKLPGE*VVSELL
Trigger: GAGAAGTTCACTCACAACCAACTCACCAGGAAGCTT...AATGGGGTCAGTGTGGAGAAGTTCACTCACAACCAACTCACCAGGAAGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533688.5
CDS-3UTR CAA 90 bp AGCTGGTCTCCAAATTTTTGCATTACACTCAAGGGTCCTGGAGTCATATCTAGAAGGGATAGGGAATGGTaGCCAGGGGGTGAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: SWSPNFCITLKGPGVISRRDREW*PGGEGV
Trigger: AACTCCCTCACCCCCTGGCAACCATTCCCTATCCCT...TCTAGATATGACTCCAGGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS-3UTR CAA 90 bp TTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGCACTGGTCTCCAAATTTTaGCATTACACTCAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: FYNKCNGDQAPPSRNAKALVSKF*HYTQGS
Trigger: GGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAG...TGCCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CAA 90 bp ATTTCTATAACAAATGCAACGGTGACCAAGCACCACCCTCCCGCAATGCTAAGGAAGCTTCCTGGTGAGTaGGTTGTGAGTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: ISITNATVTKHHPPAMLRKLPGE*VVSELL
Trigger: GAGAAGTTCACTCACAACCAACTCACCAGGAAGCTT...CCTTAGCATTGCGGGAGGGTGGTGCTTGGTCACCGTTGCATTTGTTATAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CAA 90 bp TCATATCTAGAAAAGGTCCAGATGGCTTCAATCCTAGCCAGACCCACAGCCACACTGGTCTCCAAATTTTaGCATTACACTCAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SYLEKVQMASILARPTATLVSKF*HYTQGS
Trigger: GGACCCTTGAGTGTAATGCAAAAATTTGGAGACCAG...TGTGGCTGTGGGTCTGGCTAGGATTGAAGCCATCTGGACCTTTTCTAGATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CAA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAAGGACAGAAGGCACGCTaGTGTCTTCAAGTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKGQKAR*CLQVKG
Trigger: ACCCTTCACTTGAAGACACAAGCGTGCCTTCTGTCC...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000531114.5
CDS-3UTR CAA 90 bp CCAACACAAACACAGGCAGTCAGATTTATGGCGAATGGCCATTTCTATAACAAAAAGCTTCCTGGTGAGTaGGTTGTGAGTGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: PTQTQAVRFMANGHFYNKKLPGE*VVSELL
Trigger: GAGAAGTTCACTCACAACCAACTCACCAGGAAGCTT...TTTGTTATAGAAATGGCCATTCGCCATAAATCTGACTGCCTGTGTTTGTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355547.10
ENST00000531114.5
CDS GCA 72 bp AAGGGTCCTCTGTCTCAACCAGTGAGGCTGAGCTGCTaGCCCGGGGCGAGGCGGGAGCCTCTGTGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: KGPLSQPVRLSC*PGARREPLCSP
Trigger: TGGAGAACACAGAGGCTCCCGCCTCGCCCCGGGGCAGCAGCTCAGCCTCACTGGTTGAGACAGAGGACCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS GCA 72 bp GTGAAGGGTCCTCTGTCTCAACCAGTGAGGCTGAGCTaGTGCCCCGGGGCGAGGCGGGAGCCTCTGTGTTCT +
Preference number: 6 (lower is better)
Translates to: VKGPLSQPVRLS*CPGARREPLCS
Trigger: AGAACACAGAGGCTCCCGCCTCGCCCCGGGGCAGCAGCTCAGCCTCACTGGTTGAGACAGAGGACCCTTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS CAA 90 bp TCGGAGGCCGTGTGGAGCCGTGGTGCCTCCAGGGATAGGGAATGGTaGCCAGGGGGTGAGGGAGTTACCATAGGGGTCGTGGTCTTCGGC +
Preference number: 6 (lower is better)
Translates to: SEAVWSRGASRDREW*PGGEGVTIGVVVFG
Trigger: GCCGAAGACCACGACCCCTATGGTAACTCCCTCACCCCCTGGCAACCATTCCCTATCCCTGGAGGCACCACGGCTCCACACGGCCTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000525131.5
ENST00000526279.5
ENST00000526836.1
ENST00000527308.5
ENST00000529573.1
ENST00000531114.5
ENST00000534790.5
CDS GCA 72 bp CATGCCGTGCCAATACTGTCAGCAACACCCGAGGGCTaGTGGCCCGGATGCGGCGTACCACCACCGCATAGT +
Preference number: 6 (lower is better)
Translates to: HAVPILSATPEG*WPGCGVPPPHS
Trigger: ACTATGCGGTGGTGGTACGCCGCATCCGGGCCAGCAGCCCTCGGGTGTTGCTGACAGTATTGGCACGGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS GCA 72 bp TCCCAGCTGAGCTCGGGCCACGTCATGTGCATGCCGTaGCAATACTGTCAGCAACACCCGAGGGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: SQLSSGHVMCMP*QYCQQHPRAAG
Trigger: GCCAGCAGCCCTCGGGTGTTGCTGACAGTATTGGCACGGCATGCACATGACGTGGCCCGAGCTCAGCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS GCA 72 bp CCTCCAAGTCGGCCCCCTGCCTGTCCCAAAGTCCCCTaGAGAGGATTTCTCCTGGCCTCCTACCTGCGGCTT +
Preference number: 6 (lower is better)
Translates to: PPSRPPACPKVP*RGFLLASYLRL
Trigger: AAGCCGCAGGTAGGAGGCCAGGAGAAATCCTCTGCAGGGGACTTTGGGACAGGCAGGGGGCCGACTTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526836.1
ENST00000528730.1
ENST00000531114.5
CDS CCA 72 bp GCCGTGCCAATACTGTCAGCAACACCCGAGGGCTGCTaGCCCGGATGCGGCGTACCACCACCGCATAGTCTT +
Preference number: 6 (lower is better)
Translates to: AVPILSATPEGC*PGCGVPPPHSL
Trigger: AAGACTATGCGGTGGTGGTACGCCGCATCCGGGCCAGCAGCCCTCGGGTGTTGCTGACAGTATTGGCACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS CCA 72 bp CGAGGCGGGAGCCTCTGTGTTCTCCAAGAAGAGGAGTaGGGACAGGCGAACCTGGAAGGTGGCAGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: RGGSLCVLQEEE*GQANLEGGRES
Trigger: GCTCTCCCTGCCACCTTCCAGGTTCGCCTGTCCCCACTCCTCTTCTTGGAGAACACAGAGGCTCCCGCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529098.5
CDS TCA 72 bp CCTAGGGTGGGACAGAGGTGGGCATCTTCTCCCAGCTaGGCTCGGGCCACGTCATGTGCATGCCGTGCCAAT +
Preference number: 6 (lower is better)
Translates to: PRVGQRWASSPS*ARATSCACRAN
Trigger: ATTGGCACGGCATGCACATGACGTGGCCCGAGCTCAGCTGGGAGAAGATGCCCACCTCTGTCCCACCCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS GCA 72 bp ACCCTGCACACCACATGCCCAGCCCTGCCCAGCTCCTaGTGCAGGTGGAAGCCAAAACTCTTGCCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: TLHTTCPALPSS*CRWKPKLLPSS
Trigger: AGAGGAGGGCAAGAGTTTTGGCTTCCACCTGCAGCAGGAGCTGGGCAGGGCTGGGCATGTGGTGTGCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000526279.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000533688.5
ENST00000534790.5
CDS CCA 72 bp AGAGGGCACAGCCCAAGTACAGGTTCGCCGTGTGCCTaGCAGACCCTGTGTCCTGATAGGGTGCTGGGCAGT +
Preference number: 6 (lower is better)
Translates to: RGHSPSTGSPCA*QTLCPDRVLGS
Trigger: ACTGCCCAGCACCCTATCAGGACACAGGGTCTGCCAGGCACACGGCGAACCTGTACTTGGGCTGTGCCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000526279.5
ENST00000527308.5
ENST00000529573.1
ENST00000531114.5
ENST00000534790.5
CDS CCA 72 bp TCCAGGCTCCAGGGATCAAGGAGATCGGAGGCCGTGTaGAGCCGTGGTGCCTCCAGGGATAGGGAATGGTTG +
Preference number: 6 (lower is better)
Translates to: SRLQGSRRSEAV*SRGASRDREWL
Trigger: CAACCATTCCCTATCCCTGGAGGCACCACGGCTCCACACGGCCTCCGATCTCCTTGATCCCTGGAGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525131.5
CDS GCA 72 bp GGCATCTTCTCCCAGCTGAGCTCGGGCCACGTCATGTaGATGCCGTGCCAATACTGTCAGCAACACCCGAGG +
Preference number: 6 (lower is better)
Translates to: GIFSQLSSGHVM*MPCQYCQQHPR
Trigger: CCTCGGGTGTTGCTGACAGTATTGGCACGGCATGCACATGACGTGGCCCGAGCTCAGCTGGGAGAAGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS GCA 72 bp CCTGGTCCCAAAGCTTCAGCCTCCAAGTCGGCCCCCTaGCTGTCCCAAAGTCCCCTGCAGAGGATTTCTCCT +
Preference number: 6 (lower is better)
Translates to: PGPKASASKSAP*LSQSPLQRISP
Trigger: AGGAGAAATCCTCTGCAGGGGACTTTGGGACAGGCAGGGGGCCGACTTGGAGGCTGAAGCTTTGGGACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526836.1
ENST00000528730.1
ENST00000531114.5
CDS CCA 72 bp CCGAGTGAGTGGTTACCAAGGAGATCGGAGGCCGTGTaGAGCCGTGGTGCCTCCAGGGATAGGGAATGGTTG +
Preference number: 6 (lower is better)
Translates to: PSEWLPRRSEAV*SRGASRDREWL
Trigger: CAACCATTCCCTATCCCTGGAGGCACCACGGCTCCACACGGCCTCCGATCTCCTTGGTAACCACTCACTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000526279.5
ENST00000526836.1
ENST00000527308.5
ENST00000529573.1
ENST00000531114.5
ENST00000534790.5
CDS CCA 72 bp TGGCAGTCCCGGGTCCACCTCCCACAGGAACTGTCCTaGGGCATAGACATCCTCACTGCTCCTCTCCAGCTA +
Preference number: 6 (lower is better)
Translates to: WQSRVHLPQELS*GIDILTAPLQL
Trigger: TAGCTGGAGAGGAGCAGTGAGGATGTCTATGCCCCAGGACAGTTCCTGTGGGAGGTGGACCCGGGACTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527028.5
ENST00000529098.5
ENST00000534790.5
CDS GCA 72 bp CTACTGCCTCAGGGCTCCAAGCCCCAAAATCAAGTGTaGCCTGGTCCCAAAGCTTCAGCCTCCAAGTCGGCC +
Preference number: 6 (lower is better)
Translates to: LLPQGSKPQNQV*PGPKASASKSA
Trigger: GGCCGACTTGGAGGCTGAAGCTTTGGGACCAGGGCACACTTGATTTTGGGGCTTGGAGCCCTGAGGCAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528730.1
CDS GCA 72 bp TACCTGCCTCAGGGCTCCAAGCCCCAAAATCAAGTGTaGCCTGGTCCCAAAGCTTCAGCCTCCAAGTCGGCC +
Preference number: 6 (lower is better)
Translates to: YLPQGSKPQNQV*PGPKASASKSA
Trigger: GGCCGACTTGGAGGCTGAAGCTTTGGGACCAGGGCACACTTGATTTTGGGGCTTGGAGCCCTGAGGCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531114.5
CDS CCA 72 bp ATAAAGGTAGGAGACCAGATAAGGAGGTTAGGCGCATaGGGAAGGAGGCGTCTTCCCGAGGTGGGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: IKVGDQIRRLGA*GRRRLPEVGPR
Trigger: CCTGGGCCCCACCTCGGGAAGACGCCTCCTTCCCCATGCGCCTAACCTCCTTATCTGGTCTCCTACCTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529098.5
CDS CAA 90 bp CCCAGCTCCTGCTGCAGGTGGAAGCCAAAACTCTTGCCCTCCTCTTaGCTCAGTAAACAGAAGCGAGGCCGCTCCAGGCTCCAGGGATCA +
Preference number: 6 (lower is better)
Translates to: PSSCCRWKPKLLPSS*LSKQKRGRSRLQGS
Trigger: TGATCCCTGGAGCCTGGAGCGGCCTCGCTTCTGTTTACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCACCTGCAGCAGGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000527951.5
ENST00000529098.5
ENST00000533688.5
CDS CAA 90 bp CCCAGCTCCTGCTGCAGGTGGAAGCCAAAACTCTTGCCCTCCTCTTaGCTCAGTAAACAGAAGCGAGGCCGCTCCAGGCTCCAGGGATCT +
Preference number: 6 (lower is better)
Translates to: PSSCCRWKPKLLPSS*LSKQKRGRSRLQGS
Trigger: AGATCCCTGGAGCCTGGAGCGGCCTCGCTTCTGTTTACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCACCTGCAGCAGGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526279.5
ENST00000531114.5
ENST00000534790.5
CDS GCA 72 bp GCTGCAGGTGGAAGCCAAAACTCTTGCCCTCCTCTTTaGTCAGTAAACAGAAGCGAGGCCGCTCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: AAGGSQNSCPPL*SVNRSEAAPGS
Trigger: GGAGCCTGGAGCGGCCTCGCTTCTGTTTACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCACCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000526279.5
ENST00000527028.5
ENST00000527308.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000533688.5
ENST00000534790.5
CDS GCA 72 bp ACGGTAGCCCCTGAGTATGTCTGTACCAAGCAGGGGTaGTCTACAGTAGATCCGAGGCCAGAGCCCAGTCCT +
Preference number: 6 (lower is better)
Translates to: TVAPEYVCTKQG*STVDPRPEPSP
Trigger: AGGACTGGGCTCTGGCCTCGGATCTACTGTAGAGCACCCCTGCTTGGTACAGACATACTCAGGGGCTACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS GCA 72 bp CCCAGGGCCAGAGCTCAGACAGGGACACCTCTTCGGTaGACTGAAAGGTGTATATACGCTTGTGTGCCCACC +
Preference number: 6 (lower is better)
Translates to: PRARAQTGTPLR*TERCIYACVPT
Trigger: GGTGGGCACACAAGCGTATATACACCTTTCAGTGCACCGAAGAGGTGTCCCTGTCTGAGCTCTGGCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527028.5
ENST00000529098.5
ENST00000534790.5
CDS GCA 72 bp AAACTGCCTCAGGGCTCCAAGCCCCAAAATCAAGTGTaGCCTGGTCCCAAAGCTTCAGCCTCCAAGTCGGCC +
Preference number: 6 (lower is better)
Translates to: KLPQGSKPQNQV*PGPKASASKSA
Trigger: GGCCGACTTGGAGGCTGAAGCTTTGGGACCAGGGCACACTTGATTTTGGGGCTTGGAGCCCTGAGGCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526836.1
CDS CCA 72 bp ACTTCCTGCAAGGAGGCAGGGGAAGCAGGTACAAGCTaGCAGCTGGACTTGGGTCCCAGGATCTCCTTTAGG +
Preference number: 6 (lower is better)
Translates to: TSCKEAGEAGTS*QLDLGPRISFR
Trigger: CCTAAAGGAGATCCTGGGACCCAAGTCCAGCTGCCAGCTTGTACCTGCTTCCCCTGCCTCCTTGCAGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529573.1
CDS CAA 90 bp GGTACAGGAAGCACTGTCGGGAGCCAAGAGGGACAGAAGGCACGCTaGTGTCTTCAAGTGAAGGGTCCTCTGTCTCAACCAGTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GTGSTVGSQEGQKAR*CLQVKGPLSQPVRL
Trigger: CAGCCTCACTGGTTGAGACAGAGGACCCTTCACTTGAAGACACAAGCGTGCCTTCTGTCCCTCTTGGCTCCCGACAGTGCTTCCTGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000527028.5
ENST00000529098.5
ENST00000531114.5
ENST00000534790.5
CDS TCA 72 bp GGCCAGAGCTCAGACAGGGACACCTCTTCGGTGCACTaGAAGGTGTATATACGCTTGTGTGCCCACCCCAAG +
Preference number: 6 (lower is better)
Translates to: GQSSDRDTSSVH*KVYIRLCAHPK
Trigger: CTTGGGGTGGGCACACAAGCGTATATACACCTTTCAGTGCACCGAAGAGGTGTCCCTGTCTGAGCTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527028.5
ENST00000529098.5
ENST00000534790.5
CDS GCA 72 bp CCCACAGGAACTGTCCTGGGGCATAGACATCCTCACTaGTCCTCTCCAGCTATCCTAGGCCACTGTGTACAC +
Preference number: 6 (lower is better)
Translates to: PTGTVLGHRHPH*SSPAILGHCVH
Trigger: GTGTACACAGTGGCCTAGGATAGCTGGAGAGGAGCAGTGAGGATGTCTATGCCCCAGGACAGTTCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527028.5
ENST00000529098.5
ENST00000534790.5
CDS CCA 72 bp GTGTTCTCCAAGAAGAGGAGTGGGGACAGGCGAACCTaGAAGGTGGCAGGGAGAGCAAATCTTTCGGACCTC +
Preference number: 6 (lower is better)
Translates to: VFSKKRSGDRRT*KVAGRANLSDL
Trigger: GAGGTCCGAAAGATTTGCTCTCCCTGCCACCTTCCAGGTTCGCCTGTCCCCACTCCTCTTCTTGGAGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529098.5
CDS CCA 72 bp GCAAGGAGGCAGGGGAAGCAGGTACAAGCTGGCAGCTaGACTTGGGTCCCAGGATCTCCTTTAGGTGCTAAT +
Preference number: 6 (lower is better)
Translates to: ARRQGKQVQAGS*TWVPGSPLGAN
Trigger: ATTAGCACCTAAAGGAGATCCTGGGACCCAAGTCCAGCTGCCAGCTTGTACCTGCTTCCCCTGCCTCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529573.1
CDS CAA 72 bp TGCTGCAGGTGGAAGCCAAAACTCTTGCCCTCCTCTTaGCTCAGTAAACAGAAGCGAGGCCGCTCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: CCRWKPKLLPSS*LSKQKRGRSRL
Trigger: GAGCCTGGAGCGGCCTCGCTTCTGTTTACTGAGCAAAGAGGAGGGCAAGAGTTTTGGCTTCCACCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000322712.4
ENST00000355547.10
ENST00000525131.5
ENST00000526279.5
ENST00000527028.5
ENST00000527308.5
ENST00000527951.5
ENST00000529098.5
ENST00000531114.5
ENST00000533688.5
ENST00000534790.5
CDS CCA 72 bp CGAGGCTGTGTCCTGCAGATCTACTGGGCAAAGAAGTaGGTGAGAGGAGGAGAGTCACATTCTTCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: RGCVLQIYWAKK*VRGGESHSSPQ
Trigger: CTGGGGAGAAGAATGTGACTCTCCTCCTCTCACCCACTTCTTTGCCCAGTAGATCTGCAGGACACAGCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526836.1
ENST00000527028.5
ENST00000527308.5
ENST00000531114.5
CDS GCA 72 bp GTGAGAGGAGGAGAGTCACATTCTTCTCCCCAGATGTaGCTCTTCCATTGGCATAAACTGCCTCAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: VRGGESHSSPQM*LFHWHKLPQGS
Trigger: GGAGCCCTGAGGCAGTTTATGCCAATGGAAGAGGCACATCTGGGGAGAAGAATGTGACTCTCCTCCTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526836.1
CDS CCA 72 bp ATCAGGCAGCAAAGGATCGAAGGGATTCAAGATCCATaGGGCATCAGTCACCTGGGAGATGAAGAGACGAGG +
Preference number: 6 (lower is better)
Translates to: IRQQRIEGIQDP*GISHLGDEETR
Trigger: CCTCGTCTCTTCATCTCCCAGGTGACTGATGCCCCATGGATCTTGAATCCCTTCGATCCTTTGCTGCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534790.5
CDS GCA 72 bp GTGAGAGGAGGAGAGTCACATTCTTCTCCCCAGATGTaGCTCTTCCATTGGCATAAACTGCGGCTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: VRGGESHSSPQM*LFHWHKLRLSP
Trigger: TGGAGAAAGCCGCAGTTTATGCCAATGGAAGAGGCACATCTGGGGAGAAGAATGTGACTCTCCTCCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527028.5
ENST00000527308.5
CDS GCA 72 bp GTGAGAGGAGGAGAGTCACATTCTTCTCCCCAGATGTaGCTCTTCCATTGGCATAAACTAAAAGGACTCAGG +
Preference number: 6 (lower is better)
Translates to: VRGGESHSSPQM*LFHWHKLKGLR
Trigger: CCTGAGTCCTTTTAGTTTATGCCAATGGAAGAGGCACATCTGGGGAGAAGAATGTGACTCTCCTCCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531114.5