RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDZD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000133401

Ensembl transcript IDs: ENST00000397559.3, ENST00000438447.2, ENST00000502489.5, ENST00000502824.1, ENST00000503961.1, ENST00000509256.1, ENST00000510285.1, ENST00000513184.1, ENST00000513490.1, ENST00000513852.1, ENST00000513910.1, ENST00000515115.5

Found 960 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTATCCCCATCAGTAAACATAACATAAAGGTAGGGGACAGGCACTaGAACGAAGGAACCCTCCCGGCCTGGGTGACGCAGGTGGAAGGC +
Preference number: 1 (lower is better)
Translates to: CIPISKHNIKVGDRH*NEGTLPAWVTQVEG
Trigger: GCCTTCCACCTGCGTCACCCAGGCCGGGAGGGTTCCTTCGTTCCAGTGCCTGTCCCCTACCTTTATGTTATGTTTACTGATGGGGATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 90 bp CCTCTTAGGTGTGACATTTGTGTCCCCCTCAGACTTTTAGTTCCCTaGTCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAG +
Preference number: 1 (lower is better)
Translates to: PLRCDICVPLRLLVP*SPGLGMLGELARRK
Trigger: CTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACTAAAAGTCTGAGGGGGACACAAATGTCACACCTAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CCA 90 bp TGTTGTCAGGGCTCAACGGGTTGGTTTGTGCCACTGAAGACGACCTaGCTTGTAACTACATTTCTGCTCCTTTACCTTGACTCACCCTGT +
Preference number: 1 (lower is better)
Translates to: CCQGSTGWFVPLKTT*LVTTFLLLYLDSPC
Trigger: ACAGGGTGAGTCAAGGTAAAGGAGCAGAAATGTAGTTACAAGCCAGGTCGTCTTCAGTGGCACAAACCAACCCGTTGAGCCCTGACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CCA 90 bp TATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTaGTTTGTGCCACTGAAGACGACCTGGCTTGTAACTACATTTCTG +
Preference number: 1 (lower is better)
Translates to: YGKCTLHSCCQGSTG*FVPLKTTWLVTTFL
Trigger: CAGAAATGTAGTTACAAGCCAGGTCGTCTTCAGTGGCACAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 90 bp GATGAGAAATCTGGACTCAGACAAGCCAGCTATTTCTCTCTCATCTaGAGGACCTCTCTAGGCCGACTTCAAAGATGTTTAGTGGGATTG +
Preference number: 1 (lower is better)
Translates to: DEKSGLRQASYFSLI*RTSLGRLQRCLVGL
Trigger: CAATCCCACTAAACATCTTTGAAGTCGGCCTAGAGAGGTCCTTCAGATGAGAGAGAAATAGCTGGCTTGTCTGAGTCCAGATTTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 90 bp CCTAAGAAAATAAGGTACATCATGAGGAGAGAAAAGCCAGCTATGTaGCGACGAACGGAATATCCAATCGGAATAGCTACTGGGAAGCAG +
Preference number: 1 (lower is better)
Translates to: PKKIRYIMRREKPAM*RRTEYPIGIATGKQ
Trigger: CTGCTTCCCAGTAGCTATTCCGATTGGATATTCCGTTCGTCGTCACATAGCTGGCTTTTCTCTCCTCATGATGTACCTTATTTTCTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 90 bp ATAGTGTATGTGGTAAGCCAGAGGTCTACCCTTGTACTCCAGATATaGGGATTAAAAAGACTTGCGGAAGGAGACCATTCCATTTGCTCC +
Preference number: 1 (lower is better)
Translates to: IVYVVSQRSTLVLQI*GLKRLAEGDHSICS
Trigger: GGAGCAAATGGAATGGTCTCCTTCCGCAAGTCTTTTTAATCCTCATATCTGGAGTACAAGGGTAGACCTCTGGCTTACCACATACACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CCA 90 bp AAGAAGTATCTCCAACATAAAATCTTAGTGTCATGCACACAGGTATaGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTG +
Preference number: 1 (lower is better)
Translates to: KKYLQHKILVSCTQV*QMHSPLMLSGLNGL
Trigger: CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGATTTTATGTTGGAGATACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 90 bp TGGTTGGAGTGCATAAAATTCAGAAATGGAAACCCAGTGACTGACTaGCTTGTGATATTTTTGTCTGCTCTTGGACTGACCAGTCTTGAA +
Preference number: 1 (lower is better)
Translates to: WLECIKFRNGNPVTD*LVIFLSALGLTSLE
Trigger: TTCAAGACTGGTCAGTCCAAGAGCAGACAAAAATATCACAAGTCAGTCAGTCACTGGGTTTCCATTTCTGAATTTTATGCACTCCAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 90 bp TTCATGGTTGGAGTGCATAAAATTCAGAAATGGAAACCCAGTGACTaGCTGACTTGTGATATTTTTGTCTGCTCTTGGACTGACCAGTCT +
Preference number: 1 (lower is better)
Translates to: FMVGVHKIQKWKPSD*LTCDIFVCSWTDQS
Trigger: AGACTGGTCAGTCCAAGAGCAGACAAAAATATCACAAGTCAGTCAGTCACTGGGTTTCCATTTCTGAATTTTATGCACTCCAACCATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 90 bp TGTAAGGTGCTTTTAGATGTTGACCTTTCTGCTCCCTCTAAGCAGTaGAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGCTATTCT +
Preference number: 1 (lower is better)
Translates to: CKVLLDVDLSAPSKQ*SSWLFNTAYQKCYS
Trigger: AGAATAGCACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAGAAAGGTCAACATCTAAAAGCACCTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR GCA 90 bp GTAGGTTATTTAAAGAAGTATCTCCAACATAAAATCTTAGTGTCATaGACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGG +
Preference number: 1 (lower is better)
Translates to: VGYLKKYLQHKILVS*TQVWQMHSPLMLSG
Trigger: CCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGATTTTATGTTGGAGATACTTCTTTAAATAACCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 90 bp TTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAAGATGGAAATaGAACCCAGCCTACTTTAATCTTCATGGTATATTCTTGCAACTA +
Preference number: 1 (lower is better)
Translates to: LSQPSNSMRCVGRWK*NPAYFNLHGIFLQL
Trigger: TAGTTGCAAGAATATACCATGAAGATTAAAGTAGGCTGGGTTTCATTTCCATCTTCCCACACATCTCATTGAATTTGATGGTTGACTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGGAACCCTCCCGGCCTaGGTGACGCAGGTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLGTLPA*VTQVEG
Trigger: GCCTTCCACCTGCGTCACCCAGGCCGGGAGGGTTCC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGTAGGGGACAGGCACTaGAACGAAGGAACCCTCCCG +
Preference number: 2 (lower is better)
Translates to: GMANALSTHVVRAQRVGLVGDRH*NEGTLP
Trigger: CGGGAGGGTTCCTTCGTTCCAGTGCCTGTCCCCTAC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR TCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACCCTCCCGGCCTGGGTaGCGCAGGTGGAAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: LPLNFNCLLARETFWQDVPSRPG*RRWKAS
Trigger: AGAAGCCTTCCACCTGCGTCACCCAGGCCGGGAGGG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCCTGATCACCAGGATTaGGTATGTTGGGAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLPDHQD*VCWESW
Trigger: CCAGCTCTCCCAACATACCCAATCCTGGTGATCAGG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CAA 90 bp TTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTaGTCAGGGCTCAACGGGTTGGTTTGTGCCACTGAAGACGACCTG +
Preference number: 2 (lower is better)
Translates to: LVSCTQVWQMHSPLM*SGLNGLVCATEDDL
Trigger: CAGGTCGTCTTCAGTGGCACAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCAGGATTGGGTATGTTaGGAGAGCTGGCAAGAAGGA +
Preference number: 2 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLQDWVC*ESWQEG
Trigger: TCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTGTCTGCTCTTGGACTaGCCAGTCTTGAATTCAAGC +
Preference number: 2 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLCLLLD*PVLNSS
Trigger: GCTTGAATTCAAGACTGGTCAGTCCAAGAGCAGACA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCCACTGAAGACGACCTaGCTTGTAACTACATTTCTG +
Preference number: 2 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLPLKTT*LVTTFL
Trigger: CAGAAATGTAGTTACAAGCCAGGTCGTCTTCAGTGG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CAA 90 bp CTGGGTGACGCAGGTGGAAGGCTTCTGGAGTTAATTTCATTGCTGTaGCACATACAGTTAAGTCAGGCTTCATGTGTAAGCACAAGCTTG +
Preference number: 2 (lower is better)
Translates to: LGDAGGRLLELISLL*HIQLSQASCVSTSL
Trigger: CAAGCTTGTGCTTACACATGAAGCCTGACTTAACTGTATGTGCAACAGCAATGAAATTAACTCCAGAAGCCTTCCACCTGCGTCACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR TCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGTGGAAACCCAGTGACTaGCTGACTTGTGATATTTTT +
Preference number: 2 (lower is better)
Translates to: GMANALSTHVVRAQRVGLWKPSD*LTCDIF
Trigger: AAAAATATCACAAGTCAGTCAGTCACTGGGTTTCCA...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR TCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGTTTCCCAAGTAGCGTaGGTCACGACAGTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSVSQVA*VTTVFC
Trigger: ACAGAAGACTGTCGTGACTCACGCTACTTGGGAAAC...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR GCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGACAGCTTATCAGAAGTaGTATTCTGTAAAACAGCCT +
Preference number: 2 (lower is better)
Translates to: GMANALSTHVVRAQRVGLTAYQK*YSVKQP
Trigger: AGGCTGTTTTACAGAATAGCACTTCTGATAAGCTGT...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAAATCGGAATAGCTACTaGGAAGCAGCTCATGCCACC +
Preference number: 2 (lower is better)
Translates to: LPLNFNCLLARETFWQDVNRNSY*EAAHAT
Trigger: GGTGGCATGAGCTGCTTCCCAGTAGCTATTCCGATT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAATGTCTGTACCAGTGTTaGCCATTTCAACAACCTGTG +
Preference number: 2 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKECLYQC*PFQQPV
Trigger: CACAGGTTGTTGAAATGGCCAACACTGGTACAGACA...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CAA 90 bp CTGTTGCACATACAGTTAAGTCAGGCTTCATGTGTAAGCACAAGCTaGGAGATTTTTATAGTCCGTGTCTGTACCAGTGTTGGCCATTTC +
Preference number: 2 (lower is better)
Translates to: LLHIQLSQASCVSTS*EIFIVRVCTSVGHF
Trigger: GAAATGGCCAACACTGGTACAGACACGGACTATAAAAATCTCCAAGCTTGTGCTTACACATGAAGCCTGACTTAACTGTATGTGCAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CAA 90 bp CCAGATATGAGGATTAAAAAGACTTGCGGAAGGAGACCATTCCATTaGCTCCACATTGCACAAGAAATTCCTGTCTGTTCACATAGGGCT +
Preference number: 2 (lower is better)
Translates to: PDMRIKKTCGRRPFH*LHIAQEIPVCSHRA
Trigger: AGCCCTATGTGAACAGACAGGAATTTCTTGTGCAATGTGGAGCAAATGGAATGGTCTCCTTCCGCAAGTCTTTTTAATCCTCATATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR TCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTAGACTTTTAGTTCCCTaGTCACCAGGATTGGGTATG +
Preference number: 2 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSRLLVP*SPGLGM
Trigger: CATACCCAATCCTGGTGATCAGGGAACTAAAAGTCT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR TCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATTTTTGGACAATTCCTaGGCTCAGCCTAACAGGTCA +
Preference number: 2 (lower is better)
Translates to: LPLNFNCLLARETFWQDVFLDNS*AQPNRS
Trigger: TGACCTGTTAGGCTGAGCTCAGGAATTGTCCAAAAA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR GCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGGAGACCATTCCATTTaGTCCACATTGCACAAGAAA +
Preference number: 2 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQGDHSI*STLHKK
Trigger: TTTCTTGTGCAATGTGGAGCAAATGGAATGGTCTCC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR TCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTATCTCCTCCTTCCATTaGATGTGCCTAAAAGCATTC +
Preference number: 2 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSISSFH*MCLKAF
Trigger: GAATGCTTTTAGGCACATTCAATGGAAGGAGGAGAT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAATCAAGCATGCACCTTaGACTGACTTCCTACAGTAT +
Preference number: 2 (lower is better)
Translates to: LPLNFNCLLARETFWQDVIKHAP*TDFLQY
Trigger: ATACTGTAGGAAGTCAGTGCAAGGTGCATGCTTGAT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR TCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCTCTTTATGACCCGATaGGAGTTTGGAATTATTTAC +
Preference number: 2 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSLFMTR*EFGIIY
Trigger: GTAAATAATTCCAAACTCTCATCGGGTCATAAAGAG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGACCCGATGAGAGTTTaGAATTATTTACCTAAGAAA +
Preference number: 2 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEDPMRV*NYLPKK
Trigger: TTTCTTAGGTAAATAATTCCAAACTCTCATCGGGTC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CAA 90 bp AATAAGACCTTTCTAACTAACTCCTGTACCATATTTTCCTTTGTATaGCCAGTTGATGAGAAATCTGGACTCAGACAAGCCAGCTATTTC +
Preference number: 2 (lower is better)
Translates to: NKTFLTNSCTIFSFV*PVDEKSGLRQASYF
Trigger: GAAATAGCTGGCTTGTCTGAGTCCAGATTTCTCATCAACTGGCAATACAAAGGAAAATATGGTACAGGAGTTAGTTAGAAAGGTCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAAACCCAGTGACTGACTaGCTTGTGATATTTTTGTCT +
Preference number: 2 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGNPVTD*LVIFLS
Trigger: AGACAAAAATATCACAAGTCAGTCAGTCACTGGGTT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CCA 72 bp GTGACGACGAACGGAATATCCAATCGGAATAGCTACTaGGAAGCAGCTCATGCCACCAGAGGAGGAGTGGCC +
Preference number: 3 (lower is better)
Translates to: VTTNGISNRNSY*EAAHATRGGVA
Trigger: GGCCACTCCTCCTCTGGTGGCATGAGCTGCTTCCCAGTAGCTATTCCGATTGGATATTCCGTTCGTCGTCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CCA 72 bp ATCAGTAAACATAACATAAAGGTAGGGGACAGGCACTaGAACGAAGGAACCCTCCCGGCCTGGGTGACGCAG +
Preference number: 3 (lower is better)
Translates to: ISKHNIKVGDRH*NEGTLPAWVTQ
Trigger: CTGCGTCACCCAGGCCGGGAGGGTTCCTTCGTTCCAGTGCCTGTCCCCTACCTTTATGTTATGTTTACTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CCA 72 bp TGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTaGTTTGTGCCACTGAAGACGACCTGGCTTGTAACT +
Preference number: 3 (lower is better)
Translates to: CTLHSCCQGSTG*FVPLKTTWLVT
Trigger: AGTTACAAGCCAGGTCGTCTTCAGTGGCACAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CAA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACCAGGATTGGGTATGTaGGGAGAGCTGGCAAGAAGG +
Preference number: 3 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEPGLGM*GELARR
Trigger: CCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 72 bp GTGGTAAGCCAGAGGTCTACCCTTGTACTCCAGATATaGGGATTAAAAAGACTTGCGGAAGGAGACCATTCC +
Preference number: 3 (lower is better)
Translates to: VVSQRSTLVLQI*GLKRLAEGDHS
Trigger: GGAATGGTCTCCTTCCGCAAGTCTTTTTAATCCTCATATCTGGAGTACAAGGGTAGACCTCTGGCTTACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGAGAAGTCACTCTGATTaGCTAAAGAAAGAAGAGAAC +
Preference number: 3 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLRSHSD*LKKEEN
Trigger: GTTCTCTTCTTTCTTTAGCAAATCAGAGTGACTTCT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CAA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCATTCTGCTCCTTTACCTaGACTCACCCTGTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSFCSFT*THPVSP
Trigger: AGGAGAAACAGGGTGAGTCAAGGTAAAGGAGCAGAA...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 72 bp TCTGGACTCAGACAAGCCAGCTATTTCTCTCTCATCTaGAGGACCTCTCTAGGCCGACTTCAAAGATGTTTA +
Preference number: 3 (lower is better)
Translates to: SGLRQASYFSLI*RTSLGRLQRCL
Trigger: TAAACATCTTTGAAGTCGGCCTAGAGAGGTCCTTCAGATGAGAGAGAAATAGCTGGCTTGTCTGAGTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CCA 72 bp CTCCAACATAAAATCTTAGTGTCATGCACACAGGTATaGCAAATGCACTCTCCACTCATGTTGTCAGGGCTC +
Preference number: 3 (lower is better)
Translates to: LQHKILVSCTQV*QMHSPLMLSGL
Trigger: GAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGATTTTATGTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGTGTCTGTACCAGTGTaGGCCATTTCAACAACCTGT +
Preference number: 3 (lower is better)
Translates to: LPLNFNCLLARETFWQDVVSVPV*AISTTC
Trigger: ACAGGTTGTTGAAATGGCCAACACTGGTACAGACAC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CAA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACATCTCCTCCTTCCATaGAATGTGCCTAAAAGCATT +
Preference number: 3 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSHLLLP*NVPKSI
Trigger: AATGCTTTTAGGCACATTCAATGGAAGGAGGAGATG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAAGGAGACCATTCCATTaGCTCCACATTGCACAAGAA +
Preference number: 3 (lower is better)
Translates to: LPLNFNCLLARETFWQDVRRPFH*LHIAQE
Trigger: TTCTTGTGCAATGTGGAGCAAATGGAATGGTCTCCT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 72 bp ATAAGGTACATCATGAGGAGAGAAAAGCCAGCTATGTaGCGACGAACGGAATATCCAATCGGAATAGCTACT +
Preference number: 3 (lower is better)
Translates to: IRYIMRREKPAM*RRTEYPIGIAT
Trigger: AGTAGCTATTCCGATTGGATATTCCGTTCGTCGTCACATAGCTGGCTTTTCTCTCCTCATGATGTACCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR GCA 72 bp GGATTAAAAAGACTTGCGGAAGGAGACCATTCCATTTaGTCCACATTGCACAAGAAATTCCTGTCTGTTCAC +
Preference number: 3 (lower is better)
Translates to: GLKRLAEGDHSI*STLHKKFLSVH
Trigger: GTGAACAGACAGGAATTTCTTGTGCAATGTGGAGCAAATGGAATGGTCTCCTTCCGCAAGTCTTTTTAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CCA 72 bp TTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTaGCAAGATGTAGTAGCAGTGGCTGATGACTTTAGC +
Preference number: 3 (lower is better)
Translates to: LNFNCLLARETF*QDVVAVADDFS
Trigger: GCTAAAGTCATCAGCCACTGCTACTACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR-3UTR CAA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTGTGTAAGCACAAGCTaGGAGATTTTTATAGTCCGT +
Preference number: 3 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSCVSTS*EIFIVR
Trigger: ACGGACTATAAAAATCTCCAAGCTTGTGCTTACACA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 72 bp CTTTTAGATGTTGACCTTTCTGCTCCCTCTAAGCAGTaGAGCTCATGGCTATTTAATACAGCTTATCAGAAG +
Preference number: 3 (lower is better)
Translates to: LLDVDLSAPSKQ*SSWLFNTAYQK
Trigger: CTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAGAAAGGTCAACATCTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR TCA 72 bp GGAGTGCATAAAATTCAGAAATGGAAACCCAGTGACTaGCTGACTTGTGATATTTTTGTCTGCTCTTGGACT +
Preference number: 3 (lower is better)
Translates to: GVHKIQKWKPSD*LTCDIFVCSWT
Trigger: AGTCCAAGAGCAGACAAAAATATCACAAGTCAGTCAGTCACTGGGTTTCCATTTCTGAATTTTATGCACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR GCA 72 bp ACAATCAATCAATATCTATCAATCAAGCATGCACCTTaGACTGACTTCCTACAGTATTCTACCTGTAACTGT +
Preference number: 3 (lower is better)
Translates to: TINQYLSIKHAP*TDFLQYSTCNC
Trigger: ACAGTTACAGGTAGAATACTGTAGGAAGTCAGTGCAAGGTGCATGCTTGATTGATAGATATTGATTGATTGT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCCTCTGACAGAGGCCTaGTGGGACCCGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLPLTEA*WDPGGP
Trigger: GGGCCCTCCCGGGTCCCATCAGGCCTCTGTCAGAGG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAAGCAGGAGGGCCAGGTaGCCTCCTGGGGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEASRRAR*PPGGDL
Trigger: GAGATCACCCCCAGGAGGTCACCTGGCCCTCCTGCT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCCCCTTGGGGGCCTCTaGAGAGTCCGTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLPLGGL*RVREVG
Trigger: GCCAACCTCACGGACTCTGCAGAGGCCCCCAAGGGG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGCAATCCCGGTGCCTTaGGTTCGGCCTGCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLAIPVP*VRPAAP
Trigger: AGGAGCCGCAGGCCGAACCCAAGGCACCGGGATTGC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACCTGCAGCTTCTGGATaGCCGCCTGGCAGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAPAASG*PPGRAA
Trigger: AGCGGCTCTGCCAGGCGGCCATCCAGAAGCTGCAGG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCTGCTGCCACATGGCTaGCCAGGCGCGGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLLLPHG*PGAAHS
Trigger: AGAGTGAGCCGCGCCTGGCCAGCCATGTGGCAGCAG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGTCAGCTCCTGGAGCTTaGAGCGGGACACGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLSAPGA*SGTRAR
Trigger: CCTCGCCCGTGTCCCGCTCCAAGCTCCAGGAGCTGA...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGAGCCTGCCATCCCTGTaGGCGGCACCTCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLSLPSL*AAPPSF
Trigger: GAAGGAAGGAGGTGCCGCTCACAGGGATGGCAGGCT...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCCTCGGGTCATCCTCTaGCAGAGGCCTGATGGGACC +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLPRVIL*QRPDGT
Trigger: GGTCCCATCAGGCCTCTGTCAGAGGATGACCCGAGG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAGGTGGCCCTGAGCACTaGCCTCCTGAGAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAGGPEH*PPESHC
Trigger: ACAGTGGCTCTCAGGAGGGCAGTGCTCAGGGCCACC...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATTGGGCTGTGTCTGCTaGCACATGGCTGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEALGCVC*HMAGQA
Trigger: CGCCTGGCCAGCCATGTGGCAGCAGACACAGCCCAA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACAGTGCTGGGGTCACTaGACACCTCACAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAQCWGH*TPHSQR
Trigger: GCGCTGGCTGTGAGGTGTCCAGTGACCCCAGCACTG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCAGGCTCCTTGTGAGTaGAGGTGCTGGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLQAPCE*RCWEAG
Trigger: GCCTGCCTCCCAGCACCTCCACTCACAAGGAGCCTG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGCTTACCCTGGCCACTaGTCTGTGCCTGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLAYPGH*SVPGAQ
Trigger: CTGGGCTCCAGGCACAGACCAGTGGCCAGGGTAAGC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCTGTCTGTGAGCCACTaGGCTTGGCCTCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLLSVSH*AWPQPR
Trigger: CCGAGGCTGAGGCCAAGCCCAGTGGCTCACAGACAG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGGGCAGCCACCCTCCTaGTATTGTGGGGTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLGQPPS*YCGVCW
Trigger: CCAGCACACCCCACAATACCAGGAGGGTGGCTGCCC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATGTGAGGGGGTCTCCTaGCAGGACAGCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEACEGVS*QDSTSW
Trigger: CCAGCTGGTGCTGTCCTGCCAGGAGACCCCCTCACA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCCAGTCGGCCTGGGTTaGGCTGTGTCTGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLPVGLG*AVSAAT
Trigger: TGTGGCAGCAGACACAGCCCAACCCAGGCCGACTGG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAGCCGGGCAGAGGGCCTaGGCTGATCCATCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAAGQRA*ADPSLS
Trigger: AGAAAGGGATGGATCAGCCCAGGCCCTCTGCCCGGC...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCTCCCCCACTGGTATTaGAGTTCGGGGAGGCGGATC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLLPHWY*SSGRRI
Trigger: GATCCGCCTCCCCGAACTTCAATACCAGTGGGGGAG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCAGAACCGGCCACCATaGAGTCTGACAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLQNRPP*SLTRGQ
Trigger: CTGGCCCCTTGTCAGACTTCATGGTGGCCGGTTCTG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCAGGTCCCGCTCCCCTaGGGGCAGCCACCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSQVPLP*GQPPSW
Trigger: CCAGGAGGGTGGCTGCCCTCAGGGGAGCGGGACCTG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTCGCTCCTCGCCTCGCTaGGCAGGGGATCCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSRSSPR*AGDPPS
Trigger: GCTCGGCGGATCCCCTGCGCAGCGAGGCGAGGAGCG...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACATCATCAGAGGTCTTaGTCCTGGGGGCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAHHQRS*SWGPDP
Trigger: GGGGTCTGGCCCCCAGGAGCAAGACCTCTGATGATG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCCTCACAGCCAGCGCTaGCCTTGGATTCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLPHSQR*PWILQG
Trigger: CCCCTGAAGAATCCAAGGGCAGCGCTGGCTGTGAGG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGCGAAGAATGGCCACTaGTTCCTCGTGGGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLAKNGH*FLVGEP
Trigger: GGGCTCTCCCACGAGGAAGCAGTGGCCATTCTTCGC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCAGCCTCGGATCTCTTaGAGTGGGGGCTTACCCTGG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLQPRIS*SGGLPW
Trigger: CCAGGGTAAGCCCCCACTGCAAGAGATCCGAGGCTG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACACCTGCTCGCGGCTTaGCCGAGGCTCCCGCGGCTT +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSHLLAA*PRLPRL
Trigger: AAGCCGCGGGAGCCTCGGCCAAGCCGCGAGCAGGTG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAAGCCCAGAAGCCCGATaGCTCCCAAGAGTCACGAGG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEASPEAR*LPRVTR
Trigger: CCTCGTGACTCTTGGGAGCCATCGGGCTTCTGGGCT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGACTCGAGGGTGGATTaGGGCAGCCACGTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLDSRVD*GSHVWN
Trigger: GTTCCACACGTGGCTGCCCCAATCCACCCTCGAGTC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGAAGGCTCTCAGCTCCTaGAGCTTGGAGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLKALSS*SLERDT
Trigger: CGTGTCCCGCTCCAAGCTCCAGGAGCTGAGAGCCTT...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCTCCATCTTGGCCACTaGTCCTGGAGCAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLLHLGH*SWSKAV
Trigger: CACAGCCTTGCTCCAGGATCAGTGGCCAAGATGGAG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCAGCATGGCGGACGTTaGCGGAGTTCACTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLQHGGR*RSSLPG
Trigger: TCCTGGAAGTGAACTCCGTCAACGTCCGCCATGCTG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGACAGCTCCACCTGGCTaGAAGCCAGCGACAGTCACT +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLTAPPG*KPATVT
Trigger: AGTGACTGTCGCTGGCTTTCAGCCAGGTGGAGCTGT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTGGGCAGGTTCTCTGTaGGGTGGCTGGCATCCAGAT +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLWAGSL*GGWHPD
Trigger: ATCTGGATGCCAGCCACCTCACAGAGAACCTGCCCA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGACCCGTATCACTGGCTaGACTGGGTGTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLTRITG*TGCLSS
Trigger: GCTGCTGAGACACCCAGTTCAGCCAGTGATACGGGT...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCCAGTGAGGCGCCGTTaGCTGACAGAAGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLPVRRR*LTEGNP
Trigger: GGGATTTCCTTCTGTCAGTCAACGGCGCCTCACTGG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGCAGAGGGCCTGGGCTaGTCCATCCCTTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLAEGLG*SIPFLM
Trigger: CATCAAGAAAGGGATGGATCAGCCCAGGCCCTCTGC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGAGCTGGATGTACTCCTaGAGCTTCTGGATGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLSWMYS*SFWMAA
Trigger: GGCGGCCATCCAGAAGCTGCAGGAGTACATCCAGCT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAGCCAACTTCCTCCCGTaGCAGGCAGTCACTCGATTG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAANFLP*QAVTRL
Trigger: CAATCGAGTGACTGCCTGGCACGGGAGGAAGTTGGC...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTCCGTGAGGTTGGCTaGATAGGACGCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLVREVG*IGRSIH
Trigger: GTGGATGCTGCGTCCTATGCAGCCAACCTCACGGAC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACCGTGTGTCCTTCCCTaGGCTCATTCACACCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAPCVLP*AHSHLL
Trigger: GAGCAGGTGTGAATGAGCCCAGGGAAGGACACACGG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACTCCACAGCTCCACCTaGCTGAAAGCCAGCGACAGT +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEALHSST*LKASDS
Trigger: ACTGTCGCTGGCTTTCAGCCAGGTGGAGCTGTGGAG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGTCCAGCCCCGGCTGGTaGGTGGCCCTGAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGSSPGW*VALSTA
Trigger: GGCAGTGCTCAGGGCCACCCACCAGCCGGGGCTGGA...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGTAGGTCCTGGTCGCTaGCCTTGGGGTGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLVGPGR*PWGEVE
Trigger: CTCTACTTCACCCCAAGGCCAGCGACCAGGACCTAC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCCCTCCCGGCCTGGGTaGCGCAGGTGGAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGPSRPG*RRWKAS
Trigger: AGAAGCCTTCCACCTGCGTCACCCAGGCCGGGAGGG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACCTCATGGGGGAGCCTaGCTGGAGACCTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSPHGGA*LETWPC
Trigger: GCAAGGCCAGGTCTCCAGTCAGGCTCCCCCATGAGG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACCGTCCAAAATGGCTTaGGAACTGGGCTGGCATGGA +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAPSKMA*ELGWHG
Trigger: TCCATGCCAGCCCAGTTCTCAAGCCATTTTGGACGG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGGCGCTCGGCCCTGCTaGGTAATCCTCGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEGARPC*VILAAE
Trigger: CTCTGCAGCGAGGATTACTCAGCAGGGCCGAGCGCC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGAGGCGCAATCCCGGTaGCTTGGGTTCGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVEAQSR*LGFGLR
Trigger: CCGCAGGCCGAACCCAAGGCACCGGGATTGCGCCTC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCTTCCCACTCTTCCCTaGTGGGCTGTTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLLPTLP*WAVLPQ
Trigger: CTGAGGAAGAACAGCCCAGCAGGGAAGAGTGGGAAG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCCAGGGATGAAGAACTaGCTTCATCGGAACCTCCCG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLPGMKN*LHRNLP
Trigger: CGGGAGGTTCCGATGAAGGCAGTTCTTCATCCCTGG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGACCTTTGGATTAGGGTaGCGGCCGATGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLTFGLG*RPMTRR
Trigger: TCGCCTTGTCATCGGCCGGCACCCTAATCCAAAGGT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAATGCCCTCCTCCGACGTaGTGCAGCCACTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKECPPPT*CSHFPG
Trigger: ACCCGGGAAGTGGCTGCAGCACGTCGGAGGAGGGCA...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTTGCTGGGAGGCAGGCTaGCCTCCTCCGACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSCWEAG*PPPTCC
Trigger: GCAGCACGTCGGAGGAGGGCAGCCTGCCTCCCAGCA...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGCTACCAAGAAGAGGTaGCGAGATGGCCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLATKKR*RDGLAH
Trigger: GTGAGCAAGGCCATCTCGGCACCTCTTCTTGGTAGC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGACGCAGCATCCACCATaGCCTCTGGGATACTCTCCT +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLTQHPP*PLGYSP
Trigger: AGGAGAGTATCCCAGAGGGCATGGTGGATGCTGCGT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATGTCTACAGAGGTCTTaGTGGGGTCAGGATGAGCGG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEACLQRS*WGQDER
Trigger: CCGCTCATCCTGACCCCAGCAAGACCTCTGTAGACA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATCTGGCCGACTGACTTaGCCTGTGTCTACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEASGRLT*PVSTEV
Trigger: GACCTCTGTAGACACAGGGCAAGTCAGTCGGCCAGA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACTGCTCCACATGCCTTaGTCAGGAACAGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEALLHMP*SGTGLG
Trigger: TCCCAAGCCTGTTCCTGAGCAAGGCATGTGGAGCAG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAGGAACCTGCTCCACATaGCTTGCTCAGGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAGTCST*LAQEQA
Trigger: AGCCTGTTCCTGAGCAAGGCATGTGGAGCAGGTTCC...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGGGCGCCCTGCCCTCTaGTCTACACTTAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLGRPAL*STLRRF
Trigger: AAATCTCCTAAGTGTAGAGCAGAGGGCAGGGCGCCC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGCCGTTCCTAGACGCTaGCGGACTCACCGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVAVPRR*RTHRPG
Trigger: TCCGGGCCGGTGAGTCCGGCAGCGTCTAGGAACGGC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAACCTCTGGATGCCTTTaGCTCGGGGACAACACTGCT +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEATSGCL*LGDNTA
Trigger: AGCAGTGTTGTCCCCGAGGCAAAGGCATCCAGAGGT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGACACGGGCGAGGGCTaGGTGTGGCGTACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSDTGEG*VWRTED
Trigger: GTCCTCGGTACGCCACACGCAGCCCTCGCCCGTGTC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGGGAACCCTCCCGGCCTaGGTGACGCAGGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGGTLPA*VTQVEG
Trigger: GCCTTCCACCTGCGTCACCCAGGCCGGGAGGGTTCC...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGGGCCCCACGTCCCCTaGGGTCCCTGGCCATCATCA +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVGPHVP*GPWPSS
Trigger: TGATGATGGCCAGGGACCCCAGGGGACGTGGGGCCC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCGGAGTTTTCCTTGCTaGCCACCACAAGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLRSFPC*PPQAAP
Trigger: TGGTGCAGCTTGTGGTGGCCAGCAAGGAAAACTCCG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATCCCCGTCTGCCTCCTaGTCTTCGTTATCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEASPSAS*SSLSVQ
Trigger: CTGGACTGATAACGAAGACCAGGAGGCAGACGGGGA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAGATCGAGATGACGGATaGCCGAATGAGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEADRDDG*PNEPPR
Trigger: CCTTGGAGGCTCATTCGGCCATCCGTCATCTCGATC...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTTTCGGAGGGCCTGTaGGCTTCCGGGGAGACTGGC +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEVSEGL*ASGETG
Trigger: GCCAGTCTCCCCGGAAGCCCACAGGCCCTCCGAAAC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCAGCATCGCCATACATaGATGACAGAGACGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLQHRHT*MTETAP
Trigger: CGGAGCCGTCTCTGTCATCCATGTATGGCGATGCTG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGCTGCGTCACCTGGGTaGCCCAGGCTCCCGGAAACA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEAASPG*PRLPET
Trigger: TGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTGCTGCTGCGTCACCTaGGTGGCCCAGGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSCCCVT*VAQAPG
Trigger: TCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGAGCCAGGGTCATCGTTaGGGTGGGAATTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLSQGHR*GGNSQR
Trigger: CCTTTGGGAATTCCCACCCCAACGATGACCCTGGCT...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGAGGGCCACTTCCTCCTaGACAGGCCCTGTTCCCGCC +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQRATSS*TGPVPA
Trigger: GGCGGGAACAGGGCCTGTCCAGGAGGAAGTGGCCCT...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATTCAGGACATTCCCGTaGGCTAAGCCAGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAFRTFP*AKPASE
Trigger: CTCACTGGCTGGCTTAGCCCACGGGAATGTCCTGAA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCAGGGCTCAACGGGTTaGTTTGTGCCACTGAAGACG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLQGSTG*FVPLKT
Trigger: CGTCTTCAGTGGCACAAACCAACCCGTTGAGCCCTG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAAGGCATCAAAGTGCATaGGCCCAACCAGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEARHQSA*AQPEVS
Trigger: GGAAACCTCTGGTTGGGCTCATGCACTTTGATGCCT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTGTCGAGCAGGGTGTaGGGCTGGGGCTCACCAACT +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEVSSRV*GWGSPT
Trigger: AGTTGGTGAGCCCCAGCCTCACACCCTGCTCGACAC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCTTGGAAGAGGAAATTaGGACACGCCTCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLLGRGN*DTPRVI
Trigger: GATGACCCGAGGCGTGTCTCAATTTCCTCTTCCAAG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATGGGGCTTCAGTGAGTaGCTCAGGGTCAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAWGFSE*LRVRRR
Trigger: TCTTCTTCTGACCCTGAGTCACTCACTGAAGCCCCA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAGGGAGTGAGGATGGATaGCTTGTGGATGATTCTGCG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAGSEDG*LVDDSA
Trigger: CGCAGAATCATCCACAAGTCATCCATCCTCACTCCC...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGGGCTCATTCACACCTaGTCGCGGCTTGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSGLIHT*SRLGRG
Trigger: GCCTCGGCCAAGCCGCGAGCAGGTGTGAATGAGCCC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGCCCCGCGGCTCAGGTTaGTCTCCATCTTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQPRGSG*SPSWPL
Trigger: CAGTGGCCAAGATGGAGAGCAACCTGAGCCGCGGGG...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGTCAGTCATGGGTTGTTaGCCCAGCTCTGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLSVMGC*PSSDAA
Trigger: AGCTGCATCAGAGCTGGGGCAACAACCCATGACTGA...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACGCTGGCCATTATGTTaGCTCCTTTTTCGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEARWPLC*LLFRQS
Trigger: CGACTGGCGAAAAAGGAGGCAACATAATGGCCAGCG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCGCTTTGGTTTTCGCTaGAGGAACTCAAGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLRFGFR*RNSSCV
Trigger: GACGCAGCTTGAGTTCCTGCAGCGAAAACCAAAGCG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACAGAGGTCTTGCTCCTaGGGGCCAGACCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVQRSCS*GPDPTG
Trigger: CCCTGTGGGGTCTGGCCCCCAGGAGCAAGACCTCTG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCCAGGCATTGCTCTCTaGACAGAAGAGCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLPGIAL*TEELVP
Trigger: AGGAACCAGCTCTTCTGTCCAGAGAGCAATGCCTGG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGGTTGCTCTCCATCTTaGCCACTGATCCTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLGCSPS*PLILEQ
Trigger: TTGCTCCAGGATCAGTGGCCAAGATGGAGAGCAACC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCGTTCCTCTTGGTTGTaGACGTCCATGCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLRSSWL*TSMPLE
Trigger: TTCCAAGGGCATGGACGTCCACAACCAAGAGGAACG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTTTCCAGGGCTCCCCTTaGGGGCCTCTGCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSFQGSP*GPLQSP
Trigger: CGGACTCTGCAGAGGCCCCCAAGGGGAGCCCTGGAA...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATGTCCAGTTCAGTCATaGGTTGTTGCCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEACPVQS*VVAPAL
Trigger: CAGAGCTGGGGCAACAACCCATGACTGAACTGGACA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGCTGGGCGATGCAGGCTaGCTGGGATTCTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQLGDAG*LGFSGR
Trigger: TCGGCCAGAGAATCCCAGCCAGCCTGCATCGCCCAG...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCTTACTGTGGTTACCTaGAGCTCCCTGTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLLTVVT*SSLSLL
Trigger: GAGCAGAGACAGGGAGCTCCAGGTAACCACAGTAAG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATCCAGAGCCTTACTGTaGTTACCTGGAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEASRALL*LPGAPC
Trigger: ACAGGGAGCTCCAGGTAACCACAGTAAGGCTCTGGA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACAGTGGATGGCAGCATaGAGAGGCTGGCCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEQWMAA*RGWPAV
Trigger: CACCGCAGGCCAGCCTCTCCATGCTGCCATCCACTG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACTTTGGTGTTGTCAGTaGATGGCAGCATGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEALWCCQ*MAAWRG
Trigger: GCCTCTCCATGCTGCCATCCACTGACAACACCAAAG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTGGGACCAGCCGTCCCTaGCAGAAGCTCGTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSGTSRP*QKLVGL
Trigger: AAGCCCCACGAGCTTCTGCCAGGGACGGCTGGTCCC...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACCTTCTCACGGGGACTaGCCACCGACTCTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEPSHGD*PPTLSE
Trigger: CTCCGAGAGAGTCGGTGGCCAGTCCCCGTGAGAAGG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGCACACGAGGGCCTGTaGTTCTGTGAAGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLAHEGL*FCEVLM
Trigger: CATAAGCACTTCACAGAACCACAGGCCCTCGTGTGC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACTGTCAGGGTCCTCGTaGTCGGCTACATGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSLSGSS*SATWSR
Trigger: GCGGCTCCATGTAGCCGACCACGAGGACCCTGACAG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAAGAGGTGGCAAGAGGTaGCTTGCTTTCCAGCACACA +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEARGGKR*LAFQHT
Trigger: TGTGTGCTGGAAAGCAAGCCACCTCTTGCCACCTCT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGAGATTTAGGGGTGGTTaGGCAACCTCTGTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLRFRGG*ATSVGF
Trigger: GAACCCGACAGAGGTTGCCCAACCACCCCTAAATCT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACTTGTCACAGGGACCTaGCTGTCCCGAGAGCGACCC +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKELVTGT*LSRERP
Trigger: GGGTCGCTCTCGGGACAGCCAGGTCCCTGTGACAAG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGGCGAGGGCTGCGTGTaGCGTACCGAGGACTTGTTC +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQGEGCV*RTEDLF
Trigger: GAACAAGTCCTCGGTACGCCACACGCAGCCCTCGCC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACTTCACCCGTATCACTaGCTGAACTGGGTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEALHPYH*LNWVSQ
Trigger: CTGAGACACCCAGTTCAGCCAGTGATACGGGTGAAG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTTGTGCAGCTGTGCCTaGTGCAGAACCTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLLCSCA*CRTFRT
Trigger: TGTCCTGAAGGTTCTGCACCAGGCACAGCTGCACAA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCCTTCCCATTGGCTGTaGGAGGCTCCTGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSPSHWL*EAPAGQ
Trigger: CTGCCCGGCAGGAGCCTCCCACAGCCAATGGGAAGG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGATCGGAACCTCCCGCTaGGGCTCCCCCACTGGTATT +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQIGTSR*GSPTGI
Trigger: AATACCAGTGGGGGAGCCTCAGCGGGAGGTTCCGAT...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGGCCACCATGAAGTCTaGCAAGGGGCCAGGGACATC +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEGHHEV*QGARDI
Trigger: GATGTCCCTGGCCCCTTGTCAGACTTCATGGTGGCC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACAGGTTCACTGTCTGTaGGCCACTGGGCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSQVHCL*ATGLGL
Trigger: GAGGCCAAGCCCAGTGGCTCACAGACAGTGAACCTG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATGGCCTTGCACTTGGTaGCCCTGGGCGATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVWPCTW*PWAMQA
Trigger: AGCCTGCATCGCCCAGGGTCACCAAGTGCAAGGCCA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATACATGGAGCCGCTGTaGCACTGCCTTAGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAYMEPL*HCLRKC
Trigger: ACACTTTCTAAGGCAGTGTCACAGCGGCTCCATGTA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCATCGCTGGCCTTGGGGTaGAGTAGAGATGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSSLALG*SRDGPP
Trigger: GGGAGGACCATCTCTACTTCACCCCAAGGCCAGCGA...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAAGATGGTCAGTGTCATaGTTGAGGGAGACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEARWSVS*LRETWP
Trigger: TGGCCAAGTCTCCCTCAATCATGACACTGACCATCT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACCTGTGGACCGTGATTaGTTTTGGCTCCACATCTGT +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAPVDRD*FWLHIC
Trigger: ACAGATGTGGAGCCAAAATCAATCACGGTCCACAGG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGTTCCAGGCATCAAAGTaGATGAGCCCAACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLFQASK*MSPTRG
Trigger: ACCTCTGGTTGGGCTCATGCACTTTGATGCCTGGAA...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCGAGACTATGCTGTTTaGCTTGGCAGGAGGAAGCTA +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLRDYAV*LGRRKL
Trigger: TAGCTTCCTCCTGCCAAGGCAAACAGCATAGTCTCG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAACTCCAACCATCAGCTaGCCATTCAGTGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEATPTIS*PFSERI
Trigger: GATCCTCTCACTGAATGGGCAGCTGATGGTTGGAGT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACTCCTAAGGACAGCCTaGCATCCCTGTGAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKELLRTA*HPCERH
Trigger: GTGCCGCTCACAGGGATGGCAGGCTGTCCTTAGGAG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACTGGCCACCACAAGCTaGACCATTCCCGTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVLATTS*TIPVAE
Trigger: CTCCGCCACGGGAATGGTGCAGCTTGTGGTGGCCAG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGAAGAGTCCAGCAGCTaGGGGAGGGAGTGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSEESSS*GRECFR
Trigger: CCGGAAACACTCCCTCCCGCAGCTGCTGGACTCTTC...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTCCTCCTCCGACGTGCTaGAGCCACTTCCCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSPPPTC*SHFPGD
Trigger: ATCACCCGGGAAGTGGCTGCAGCACGTCGGAGGAGG...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATGGTATTGTGGGGTGTaGTGGTTTCCGATGCTGATC +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAWYCGV*WFPMLI
Trigger: GATCAGCATCGGAAACCAGCACACCCCACAATACCA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCATGGTGTCATTCCCTCTaGTCCAGGTCCCGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSWCHSL*SRSRSP
Trigger: AGGGGAGCGGGACCTGGAGCAGAGGGAATGACACCA...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGGAGCTCCCTGTCTCTaGTCCTGGGATGTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVGAPCL*SWDVRG
Trigger: CCCCCTCACATCCCAGGAGCAGAGACAGGGAGCTCC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTGGGTTGGGCTGTGTCTaGTGCCACATGGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSGLGCV*CHMAGQ
Trigger: CTGGCCAGCCATGTGGCAGCAGACACAGCCCAACCC...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGGGCTCCCGGAAACAATaGTGCCGGAAGACCGCCTCC +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGGSRKQ*CRKTAS
Trigger: GGAGGCGGTCTTCCGGCAGCATTGTTTCCGGGAGCC...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGTGCAGGAACTCAAGCTaGGTCTCAACAACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLCRNSS*VSTTLL
Trigger: CAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCA...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGACAGACTGTAATCTTTaGTGGTCCCCCGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLTDCNL*WSPAET
Trigger: AGTCTCAGCGGGGGACCAGCAAAGATTACAGTCTGT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGTAGGGGACAGGCACTaGAACGAAGGAACCCTCCCG +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQVGDRH*NEGTLP
Trigger: CGGGAGGGTTCCTTCGTTCCAGTGCCTGTCCCCTAC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACAAATGACACAGGAATaGAGGATCCCTCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAQMTQE*RIPPAV
Trigger: CACTGCTGGAGGGATCCTCCATTCCTGTGTCATTTG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAATGGCGGAGCGAAGAATaGCCACTGCTTCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEWRSEE*PLLPRG
Trigger: CCCACGAGGAAGCAGTGGCCATTCTTCGCTCCGCCA...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGCTGCACCATTCCCGTaGCGGAGCGAAGAATGGCCA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEAAPFP*RSEEWP
Trigger: TGGCCATTCTTCGCTCCGCCACGGGAATGGTGCAGC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCATCTTCTACCGAGCTaGTCAGATCTGGCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLHLLPS*SDLASS
Trigger: AGAGCTTGCCAGATCTGACCAGCTCGGTAGAAGATG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGCAGCCTACCTTCCTCTaGCGGAGGAGAGGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQQPTFL*RRRGFR
Trigger: CCGAAACCCTCTCCTCCGCCAGAGGAAGGTAGGCTG...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTAGTGGGGGCTTACCCTaGCCACTGGTCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSSGGLP*PLVCAW
Trigger: CCAGGCACAGACCAGTGGCCAGGGTAAGCCCCCACT...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACTACAGAGGTCTTGCTaGGGTCAGGATGAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKELQRSC*GQDERP
Trigger: GGGCCGCTCATCCTGACCCCAGCAAGACCTCTGTAG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAAAGAGTGATGATGGCTaGGAAGAGTCTGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAKSDDG*EESGPE
Trigger: TTCAGGCCCAGACTCTTCCCAGCCATCATCACTCTT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAGTTTTGTGGGAGGTCTaGGGTGAGATCAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAVLWEV*GEIKGF
Trigger: GAAACCCTTGATCTCACCCCAGACCTCCCACAAAAC...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGCTCAGGAACAGGCTTaGGAGAGGTCAGGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEAQEQA*ERSGAR
Trigger: TCTCGCCCCTGACCTCTCCCAAGCCTGTTCCTGAGC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTCCCAATGGGAGGCTTaGAGCTCACCGACAAAAATG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLSQWEA*SSPTKM
Trigger: CATTTTTGTCGGTGAGCTCCAAGCCTCCCATTGGGA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGCGAGGGAAACCTTCTaGCAAGATGTAGTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLARETF*QDVVAV
Trigger: CACTGCTACTACATCTTGCCAGAAGGTTTCCCTCGC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CAA 72 bp TGCACACAGGTATGGCAAATGCACTCTCCACTCATGTaGTCAGGGCTCAACGGGTTGGTTTGTGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: CTQVWQMHSPLM*SGLNGLVCATE
Trigger: TTCAGTGGCACAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACAGCTGCCCATTCAGTaGGAGGATCTCATCCCGCAG +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSQLPIQ*EDLIPQ
Trigger: CTGCGGGATGAGATCCTCTCACTGAATGGGCAGCTG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACGGCCTCCACTAACCTaGATTCCCAGCCCATCCGAT +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSRPPLT*IPSPSD
Trigger: ATCGGATGGGCTGGGAATTCAGGTTAGTGGAGGCCG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTCCTCTGCAGAGTCCGTaGGGTTGGCTGCATAGGACG +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSPLQSP*GWLHRT
Trigger: CGTCCTATGCAGCCAACCTCACGGACTCTGCAGAGG...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGCTCGTGTCAGACACTaGGGGTTTCAGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEARVRH*GFQWPR
Trigger: TCTGGGCCACTGAAACCCTCAGTGTCTGACACGAGC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTCTCCTGGACTGAAATaGTATCCCCTTCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLSPGLK*YPLHLW
Trigger: CCACAGATGAAGGGGATATCATTTCAGTCCAGGAGA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGGTTCTCAAAAGACTTaGTCCGCTGCTTCACAGAGA +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLGSQKT*SAASQR
Trigger: TCTCTGTGAAGCAGCGGATCAAGTCTTTTGAGAACC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTCTCCAGCTCAGTTTTaGAGAGCACGGCGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSSPAQF*RARRSA
Trigger: GGCCGAGCGCCGTGCTCTTCAAAACTGAGCTGGAGA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGATGATGTACAAAGCTaGTGGCTAAAGCCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLDDVQS*WLKPLH
Trigger: ATGGAGGGGCTTTAGCCATCAGCTTTGTACATCATC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACGTTCTCCAGCTCAGTaGTGGGGTCACTGGACACCT +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSRSPAQ*WGHWTP
Trigger: AGGTGTCCAGTGACCCCAGCACTGAGCTGGAGAACG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTTCGGGGAGGCGGATCTaGTCATGTGTGTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSSGRRI*SCVWVS
Trigger: CGACACCCACACACATGAGCAGATCCGCCTCCCCGA...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAATGGATCATTGGCTCTaGCAGTCAGGTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAMDHWL*QSGSLS
Trigger: AGACAGTGAACCTGACTGGCAGAGCCAATGATCCAT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCTGGGAGCTTTCAGGTaGATGGATTCCTGTCATTTC +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLLGAFR*MDSCHF
Trigger: GAAATGACAGGAATCCATGCACCTGAAAGCTCCCAG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTCCTCGGGGACAACACTaGTTGTCACAGGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSPRGQH*LSQGPG
Trigger: GCCAGGTCCCTGTGACAAGCAGTGTTGTCCCCGAGG...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCAACAACCTTGCTGCTaGGTCACCTGGGTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGQQPCC*VTWVAQ
Trigger: CTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAATCTCAACAACCTTGCTaGTGCGTCACCTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKESQQPC*CVTWVA
Trigger: GGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGA...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGCGTCTCAACAACCTTaGTGCTGCGTCACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEASQQP*CCVTWV
Trigger: CACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTCTGGGGCAGGAGGGTaGCGGCTTCGCTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQSGAGG*RLRFGF
Trigger: AAAACCAAAGCGAAGCCGGCACCCTCCTGCCCCAGA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTCCACACTTCTCCCAATaGCAGGCTCCAGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSPHFSQ*QAPGGW
Trigger: CCATCCCCCTGGAGCCTGGCATTGGGAGAAGTGTGG...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTGTCCCCTGGGGTCCCTaGCCATCATCAGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSVPWGP*PSSALP
Trigger: AGGCAAAGCTGATGATGGCCAGGGACCCCAGGGGAC...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACCCACTCTTCCCTGCTaGGCTGTTCTTCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEPTLPC*AVLPQL
Trigger: GAGCTGAGGAAGAACAGCCCAGCAGGGAAGAGTGGG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTCTCCAGCTCAGTGCTaGGGTCACTGGACACCTCAC +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQSPAQC*GHWTPH
Trigger: GTGAGGTGTCCAGTGACCCCAGCACTGAGCTGGAGA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGGGCCAGGGACATCGTaGGCAAAGTACTGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQGPGTS*AKYWES
Trigger: ACTCTCCCAGTACTTTGCCCACGATGTCCCTGGCCC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCGGGGTCGTTCCTCTTaGTTGTGGACGTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSRGRSS*LWTSMP
Trigger: GGGCATGGACGTCCACAACCAAGAGGAACGACCCCG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGTGAGCCACTGGGCTTaGCCTCAGCCTCGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSVSHWA*PQPRIS
Trigger: AGAGATCCGAGGCTGAGGCCAAGCCCAGTGGCTCAC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCCCTGTCTCTGCTCCTaGGATGTGAGGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSPCLCS*DVRGSP
Trigger: AGGAGACCCCCTCACATCCCAGGAGCAGAGACAGGG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTCCACTGTCCCCCGTCTaGGAAGACGGAGACCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSPLSPV*EDGDLA
Trigger: AGCAAGGTCTCCGTCTTCCCAGACGGGGGACAGTGG...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGACTGGGAGGCCCATTGTaGGTAGGCGGGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGLGGPL*VGGGTS
Trigger: GCTGGTGCCCCCGCCTACCCACAATGGGCCTCCCAG...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGAGCAGGACTCGAGGGTaGATTGGGGCAGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGSRTRG*IGAATC
Trigger: ACACGTGGCTGCCCCAATCCACCCTCGAGTCCTGCT...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTCGTGGTCGGCTACATaGAGCCGCTGTGACACTGCC +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSSWSAT*SRCDTA
Trigger: GGCAGTGTCACAGCGGCTCCATGTAGCCGACCACGA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATTTCGCCAGTCGGCCTaGGTTGGGCTGTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVFRQSA*VGLCLL
Trigger: CAGCAGACACAGCCCAACCCAGGCCGACTGGCGAAA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACCTGGTCGCTGGCCTTaGGGTGAAGTAGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEPGRWP*GEVEMV
Trigger: GACCATCTCTACTTCACCCCAAGGCCAGCGACCAGG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGCCCTCCCGTCCAAAATaGCTTGAGAACTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQPSRPK*LENWAG
Trigger: GCCAGCCCAGTTCTCAAGCCATTTTGGACGGGAGGG...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTAAGACCGCCTCCCAATaGGAGGCTTGGAGCTCACCG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSKTASQ*EAWSSP
Trigger: CGGTGAGCTCCAAGCCTCCCATTGGGAGGCGGTCTT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACAGAGCCCTTGCTACTaGTCTCTGGTGGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSQSPCY*SLVGSA
Trigger: GGCAGAACCCACCAGAGACCAGTAGCAAGGGCTCTG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGCAAACCCTTCCCATTaGCTGTGGGAGGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSANPSH*LWEAPA
Trigger: GGCAGGAGCCTCCCACAGCCAATGGGAAGGGTTTGC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGAGACTTTTAGTTCCCTaGTCACCAGGATTGGGTATG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLRLLVP*SPGLGM
Trigger: CATACCCAATCCTGGTGATCAGGGAACTAAAAGTCT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCCAGTAAATGACCATTaGTTACCAGCAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLPVNDH*LPAAHL
Trigger: GAGATGAGCTGCTGGTAATCAATGGTCATTTACTGG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGTTATATTCTTCAACTaGCTCAAGGCGGTGTACACC +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLVIFFN*LKAVYT
Trigger: GGTGTACACCGCCTTGAGTCAGTTGAAGAATATAAC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACTTCCGACCCAGGGATaGAGAACTGCCTTCATCGGA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKELPTQG*RTAFIG
Trigger: TCCGATGAAGGCAGTTCTTCATCCCTGGGTCGGAAG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTTCACTTCCAGGATTTaGTCCCCGCGGCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQFTSRI*SPRLRL
Trigger: CAACCTGAGCCGCGGGGATCAAATCCTGGAAGTGAA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCATTGTTGCCCCAGCTCTaGTGCAGCTTTGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSLLPQL*CSFGQV
Trigger: AACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAA...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGATTCTCTGGCCGACTaGCTTGCCCTGTGTCTACAG +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEDSLAD*LALCLQ
Trigger: CTGTAGACACAGGGCAAGTCAGTCGGCCAGAGAATC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACTCGTGGGGCTTCAGTaGGTGACTCAGGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVLVGLQ*VTQGQK
Trigger: CTTCTGACCCTGAGTCACTCACTGAAGCCCCACGAG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGGCTAAAGCCCCTCCATaGATCTGGGGGTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGAKAPP*IWGSQP
Trigger: TGGCTGTGACCCCCAGATTCATGGAGGGGCTTTAGC...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCCTGAGGAGGTCCTCTaGGGAGTTTTCCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSPEEVL*GVFLAG
Trigger: GCCAGCAAGGAAAACTCCGCAGAGGACCTCCTCAGG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGGTGCCGAGATGGCCTTaGTCACCAGTGTTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGVPRWP*SPVFSG
Trigger: CCCGGAAAACACTGGTGAGCAAGGCCATCTCGGCAC...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGACAGAGACGGCTCCGTaGTGTCACCCAGGCCTGATA +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGTETAP*CHPGLI
Trigger: TATCAGGCCTGGGTGACAGCACGGAGCCGTCTCTGT...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACAGCCATGTGGAACCTaGTCCACATGCCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSQPCGT*STCLAQ
Trigger: CTGAGCAAGGCATGTGGAGCAGGTTCCACATGGCTG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAAAGACCACCTCTGGATaGCTTTGCCTCGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSKTTSG*LCLGDN
Trigger: GTTGTCCCCGAGGCAAAGGCATCCAGAGGTGGTCTT...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTCCCGGAAACAATGCTaGCGGAAGACCGCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSSRKQC*RKTASQ
Trigger: TTGGGAGGCGGTCTTCCGGCAGCATTGTTTCCGGGA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTCTCTGGTGGGTTCTaGCGAGAGATGGTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEVSGGF*REMVSV
Trigger: GACACTGACCATCTCTCGGCAGAACCCACCAGAGAC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAAGCACGGCATTGTCCTaGGTGATGGGCATGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVSTALS*VMGMVL
Trigger: GAGCACCATGCCCATCACCCAGGACAATGCCGTGCT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGGGGCTGTGATCAGGTaGGACCGTACTCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVGAVIR*DRTLIH
Trigger: GTGGATGAGAGTACGGTCCCACCTGATCACAGCCCC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGGCCACTGCTTCCTCGTaGGAGAGCCCGACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGATASS*ESPTSK
Trigger: TTTACTGGTCGGGCTCTCCCACGAGGAAGCAGTGGC...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACTGCTCGGAAACCTTTaGATTAGGGTGCCGGCCGAT +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSLLGNL*IRVPAD
Trigger: ATCGGCCGGCACCCTAATCCAAAGGTTTCCGAGCAG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGAGTCACGAGGCTGTTaGCTCTGGGTTTTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEESRGC*LWVFQA
Trigger: AGCCTGGAAAACCCAGAGCCAACAGCCTCGTGACTC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGGCTTCCGGGGAGACTaGCTTGTCTGGCAACTGTCA +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSGFRGD*LVWQLS
Trigger: TGACAGTTGCCAGACAAGCCAGTCTCCCCGGAAGCC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCTGGCTGGGATTCTCTaGCCGACTGACTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGLAGIL*PTDLPC
Trigger: ACAGGGCAAGTCAGTCGGCCAGAGAATCCCAGCCAG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACAGGACAGCACCAGCTaGTGTCATTCCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVQDSTS*CHSLCS
Trigger: GGAGCAGAGGGAATGACACCAGCTGGTGCTGTCCTG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAGCAGCATGGAGAGGCTaGCCTGCGGTGCCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGAAWRG*PAVPLR
Trigger: CCTCAAGGGCACCGCAGGCCAGCCTCTCCATGCTGC...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGGGTGTTGTCAGTGGATaGCAGCATGGAGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGGVVSG*QHGEAG
Trigger: GCCAGCCTCTCCATGCTGCCATCCACTGACAACACC...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACAGTGCCCCGAGACATaGCCACATGCTTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSQCPET*PHASLV
Trigger: CACCAAAGAAGCATGTGGCCATGTCTCGGGGCACTG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATTAGAAAGTGTTTTGTaGGAGGTCTGGGGTGAGATC +
Preference number: 4 (lower is better)
Translates to: SSLITRIGYVGRAGKKEALESVL*EVWGEI
Trigger: GATCTCACCCCAGACCTCCCACAAAACACTTTCTAA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGTCCACGATTTTCAGCTaGTTTGTTCTTTCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLSTIFS*FVLSRR
Trigger: TCGCCTCGAAAGAACAAACCAGCTGAAAATCGTGGA...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACTGGAATGCTGTTTCTaGGCACCCCTCGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVLECCF*APLGSL
Trigger: CAGACTCCCGAGGGGTGCCCAGAAACAGCATTCCAG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAAGAACTGGGCTGGCATaGAGTAGGTCCTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVRTGLA*SRSWSL
Trigger: CAGCGACCAGGACCTACTCCATGCCAGCCCAGTTCT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATGGGAAGACCACCTCTaGATGCCTTTGCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVWEDHL*MPLPRG
Trigger: TCCCCGAGGCAAAGGCATCCAGAGGTGGTCTTCCCA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGCTCACCGACAAAAATaGGGAAGCCCCGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSAHRQK*GSPGLG
Trigger: GCCAAGTCCGGGGCTTCCCCATTTTTGTCGGTGAGC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGATCTCCTCCTTCCATTaGATGTGCCTAAAAGCATTC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLISSFH*MCLKAF
Trigger: GAATGCTTTTAGGCACATTCAATGGAAGGAGGAGAT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGTAACTGGCCCCACTaGCATCAACTCCAACCATCA +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSGNWPH*HQLQPS
Trigger: TGATGGTTGGAGTTGATGTCAGTGGGGCCAGTTACC...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTCCAGCCACCTCCTTaGGAGAATCTGGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEVQPPP*ENLGHF
Trigger: AAAATGGCCCAGATTCTCTCAAGGAGGTGGCTGGAC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACAAGGAGATTCCACCTaGGTCGTGCTTAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVQGDST*VVLKER
Trigger: CCGCTCCTTAAGCACGACTCAGGTGGAATCTCCTTG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGCTGGTTTCCGATGCTaGTCGAGTCTTGCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEAGFRC*SSLAVV
Trigger: GACTACAGCAAGACTCGATCAGCATCGGAAACCAGC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAATCTCCCGTCACCGATaGTTTTCCCCCATCCAGACT +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSISRHR*FSPIQT
Trigger: AGTCTGGATGGGGGAAAATCATCGGTGACGGGAGAT...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTGGACTGACCAGTCTTaGATTCAAGCACTTATCAAG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLWTDQS*IQALIK
Trigger: CTTGATAAGTGCTTGAATTCAAGACTGGTCAGTCCA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGTGGAGTGGGCTTTGTaGTTAAAGCGACGCAGCATG +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQVEWAL*LKRRSM
Trigger: CATGCTGCGTCGCTTTAAGCACAAAGCCCACTCCAC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCTGCGGAGTTTTCCTTaGTGGCCACCACAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGLRSFP*WPPQAA
Trigger: TGCAGCTTGTGGTGGCCAGCAAGGAAAACTCCGCAG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTGTCCTCTTCCCCGTCTaGCTCCTGGTCTTCGTTATC +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSVLFPV*LLVFVI
Trigger: GATAACGAAGACCAGGAGGCAGACGGGGAAGAGGAC...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGATGCTGATCGAGTCTTaGTGTAGTCAGGGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGMLIES*CSQGEP
Trigger: CGGCTCCCCCTGACTACAGCAAGACTCGATCAGCAT...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGGAAGACGGAGACCTTaGTGCAGAAGCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSGRRRP*CRSIQL
Trigger: GAGCTGGATGCTTCTGCAGCAAGGTCTCCGTCTTCC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTGGCAAGAGGTGGCTTaGTTTCCAGCACACACTGGG +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSWQEVA*FPAHTG
Trigger: CCCAGTGTGTGCTGGAAAGCAAGCCACCTCTTGCCA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTACTCTGTCTGTTCCCTaGCACGGACATGCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSTLSVP*HGHAVP
Trigger: AGGAACGGCATGTCCGTGGCAGGGAACAGACAGAGT...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCCGAATCAGAGCCCTTaGTACTGGTCTCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGPNQSP*YWSLVG
Trigger: ACCCACCAGAGACCAGTAGCAAGGGCTCTGATTCGG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAATGTCAAGGTCAGGCATaGTCAAGGCTCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKECQGQA*SRLSAP
Trigger: AGGAGCTGAGAGCCTTGAGCATGCCTGACCTTGACA...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCACATCTGTCCCTCCTaGCACACTGAATCCCAGACC +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSHICPS*HTESQT
Trigger: GGTCTGGGATTCAGTGTGGCAGGAGGGACAGATGTG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAACGAGGGCATCTTTGTaGAGCTGTGCCTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVTRASL*SCAWCR
Trigger: TCTGCACCAGGCACAGCTGCACAAAGATGCCCTCGT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCCATTTGCTCCACATTaGACAAGAAATTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLPFAPH*TRNSCL
Trigger: CAGACAGGAATTTCTTGTGCAATGTGGAGCAAATGG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACCTGATCACCAGGATTaGGTATGTTGGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSPDHQD*VCWESW
Trigger: CCAGCTCTCCCAACATACCCAATCCTGGTGATCAGG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGAGCACAGGACCCTGGTaGGTTTTCCTCTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGSTGPW*VFLFLP
Trigger: GGGCAAGAAGAGGAAAACCCACCAGGGTCCTGTGCT...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTCTGGACAGAAGAGCTaGTTCCTTCGTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQSGQKS*FLRPLP
Trigger: GGGAAGAGGACGAAGGAACCAGCTCTTCTGTCCAGA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTATTCCTGTGAGGCACTaGAAGAGTCCAGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSIPVRH*KSPAAA
Trigger: CGCAGCTGCTGGACTCTTCCAGTGCCTCACAGGAAT...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACGAGGCTGTTGGCTCTaGGTTTTCCAGGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVRGCWL*VFQAPC
Trigger: ACAAGGAGCCTGGAAAACCCAGAGCCAACAGCCTCG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGGAGACTGGCTTGTCTaGCAACTGTCACCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQGDWLV*QLSPAC
Trigger: ACAAGCAGGTGACAGTTGCCAGACAAGCCAGTCTCC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGTGTTCGTCGGACTCTaGGTGTCTGTACGGACTGTG +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSVFVGL*VSVRTV
Trigger: CACAGTCCGTACAGACACCCAGAGTCCGACGAACAC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACGAGTCCAGATCGCATaGATCATTGGCTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKERVQIA*IIGSAS
Trigger: ACTGGCAGAGCCAATGATCCATGCGATCTGGACTCG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCATTGACAGAAGTGGCCTaGACTCTCGAGTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSLTEVA*TLESRS
Trigger: CGATCTGGACTCGAGAGTCCAGGCCACTTCTGTCAA...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGACCCTCCTGGTATTGTaGGGTGTGCTGGTTTCCGAT +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQTLLVL*GVLVSD
Trigger: ATCGGAAACCAGCACACCCCACAATACCAGGAGGGT...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAGGGAAGCCCCGGACTTaGCTACAGGCCGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGGKPRT*LQAGQH
Trigger: ATGCTGACCGGCCTGTAGCCAAGTCCGGGGCTTCCC...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGGGTCATCGTTGGGGTaGGAATTCCCAAAGGACCAA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEGSSLG*EFPKDQ
Trigger: TTGGTCCTTTGGGAATTCCCACCCCAACGATGACCC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCAGGACCCATGCAAATaGCACAGGAATGGAGGATCC +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSQDPCK*HRNGGS
Trigger: GGATCCTCCATTCCTGTGTCATTTGCATGGGTCCTG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCACTGGAGTGCTCAATaGGGGAAGGAAGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSHWSAQ*GKEGSV
Trigger: GACACTTCCTTCCTTCCCTCATTGAGCACTCCAGTG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGACGGCATTGTCCTGGGTaGTGGGCATGGTGCTCACTC +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGRHCPG*WAWCSL
Trigger: GAGTGAGCACCATGCCCATCACCCAGGACAATGCCG...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGGGCCATTTTCTAGCTaGAAGACATGGCCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEGPFSS*KTWPFP
Trigger: TGGAAACGGCCATGTCTTTCAGCTAGAAAATGGCCC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGTGACAACGATAGCGTaGGGTGAGCGCTTTGATCCT +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSVTTIA*GERFDP
Trigger: AGGATCAAAGCGCTCACCTCACGCTATCGTTGTCAC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGGAAGAGATGAGGTCTaGGGAGCTGTCCAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVGRDEV*GAVQFS
Trigger: ACTGAACTGGACAGCTCCTCAGACCTCATCTCTTCC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTGCGAGACAAATGTCCTaGTGCTCGTGTCAGACACTG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSARQMS*CSCQTL
Trigger: CAGTGTCTGACACGAGCATCAGGACATTTGTCTCGC...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAATTTCACTCTTCTCCTaGCAGTTGCCCTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVISLFS*QLPWAK
Trigger: CTTGGCCCAGGGCAACTGTCAGGAGAAGAGTGAAAT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCCTGGCGATAGAGCCTaGTTTCACTCTTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSPGDRA*FHSSPD
Trigger: GTCAGGAGAAGAGTGAAATCAGGCTCTATCGCCAGG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTTTCTAATGGCTGTTTaGAGGGAGGAGGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQFLMAV*REEEED
Trigger: GTCCTCCTCCTCCTCCCTTCAAACAGCCATTAGAAA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGGTCAGTGTCATGATTaGGGGAGACTTGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVGQCHD*GRLGHL
Trigger: CAGATGGCCAAGTCTCCCTCAATCATGACACTGACC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAACACCCTGTGGACCGTaGTTGATTTTGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKETPCGP*LILAPH
Trigger: ATGTGGAGCCAAAATCAATCACGGTCCACAGGGTGT...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGAACCCAGTGACTGACTaGCTTGTGATATTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLNPVTD*LVIFLS
Trigger: AGACAAAAATATCACAAGTCAGTCAGTCACTGGGTT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGGCCATCATCAGCTTTaGCTGTGTTCATGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQGHHQL*LCSCSG
Trigger: GCCTGAACATGAACACAGGCAAAGCTGATGATGGCC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACCATCTGTCCACGAATaGAGTCTCGACCTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVPSVHE*SLDLQQ
Trigger: TTGCTGGAGGTCGAGACTGCATTCGTGGACAGATGG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGGCTCACCAACTTTGTaGGTACCGTTAAAACAAATA +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLGSPTL*VPLKQI
Trigger: TATTTGTTTTAACGGTACGCACAAAGTTGGTGAGCC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAAGATGGCGTGGACTTTaGTTAAAGCAGCATGGCGGA +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSRWRGL*LKQHGG
Trigger: TCCGCCATGCTGCTTTAAGCAAAGTCCACGCCATCT...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGGTTGTGGACGTCCATaGCCTTGGAAGAGGAAATTG +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEGCGRP*PWKRKL
Trigger: CAATTTCCTCTTCCAAGGGCATGGACGTCCACAACC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAAGACGGAGACCTTGCTaGAGAAGCATCCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVRRRPC*RSIQLL
Trigger: AAGGAGCTGGATGCTTCTGCAGCAAGGTCTCCGTCT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGTGTGATATTTTTGTCTaGTCTTGGACTGACCAGTCT +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLCDIFV*SWTDQS
Trigger: AGACTGGTCAGTCCAAGAGCAGACAAAAATATCACA...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACTATGCTGTTTGCCTTaGCAGGAGGAAGCTAGGACC +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVLCCLP*QEEART
Trigger: GGTCCTAGCTTCCTCCTGCCAAGGCAAACAGCATAG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATCCAGCACAGGACCCTaGTGGGTTTTCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVSSTGP*WVFLFL
Trigger: CAAGAAGAGGAAAACCCACCAGGGTCCTGTGCTGGA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAAGGCAGTCACTCGATTaGAAGTCCGTCTTCCCACCT +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVRQSLD*KSVFPP
Trigger: AGGTGGGAAGACGGACTTCCAATCGAGTGACTGCCT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTTGCTTAAAGCAGCATaGCGGACGTTGACGGAGTTC +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQLLKAA*RTLTEF
Trigger: GAACTCCGTCAACGTCCGCCATGCTGCTTTAAGCAA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCATCACTGGCATCGTTaGCATCGTAGCAGCCTACCT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGHHWHR*HRSSLP
Trigger: AGGTAGGCTGCTACGATGCCAACGATGCCAGTGATG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGATCGCATGGATCATTaGCTCTGCCAGTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQDRMDH*LCQSGS
Trigger: TGAACCTGACTGGCAGAGCCAATGATCCATGCGATC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAATATTGTGGGGTGTGCTaGTTTCCGATGCTGATCGAG +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEYCGVC*FPMLIE
Trigger: CTCGATCAGCATCGGAAACCAGCACACCCCACAATA...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGCCACATGCTTCTTTaGTGTTGTCAGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSGHMLL*CCQWMA
Trigger: TGCCATCCACTGACAACACCAAAGAAGCATGTGGCC...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAAGGCAGCTCGTCTCCTaGACTGAAATGATATCCCCT +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSRQLVS*TEMISP
Trigger: AGGGGATATCATTTCAGTCCAGGAGACGAGCTGCCT...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCAGGCCGGTCAGCATTaGCCAGGTTCTCAAAAGACT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGQAGQH*PGSQKT
Trigger: AGTCTTTTGAGAACCTGGCCAATGCTGACCGGCCTG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTCTTGCTACTGGTCTCTaGTGGGTTCTGCCGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSLATGL*WVLPRD
Trigger: ATCTCTCGGCAGAACCCACCAGAGACCAGTAGCAAG...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACTAAAAGGCAGATCCTaGGCAGCTTCACCCGTATCA +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSLKGRS*AASPVS
Trigger: TGATACGGGTGAAGCTGCCCAGGATCTGCCTTTTAG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGACTGTAATCTTTGCTaGTCCCCCGCTGAGACTAGA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEDCNLC*SPAETR
Trigger: TCTAGTCTCAGCGGGGGACCAGCAAAGATTACAGTC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGGGGGGATGGTCTTTCTaGACAGCAAACCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGGGWSF*TANPSH
Trigger: ATGGGAAGGGTTTGCTGTCCAGAAAGACCATCCCCC...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
47% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCGTCTTCCCACCTTTTaGGAAGCGGCGTTTGTCATT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGRLPTF*EAAFVI
Trigger: AATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGCCCATCCGATTCTTTaGGCAGCTCCATCTTCCATA +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSAHPIL*AAPSSI
Trigger: TATGGAAGATGGAGCTGCTCAAAGAATCGGATGGGC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAGCGGTGTACACCCCCTaGAAGGCGACTCTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGAVYTP*KATLEL
Trigger: AAGCTCAAGAGTCGCCTTTCAGGGGGTGTACACCGC...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGAATGTGGTATTCCTGTaGGGCACTGGAAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGNVVFL*GTGRVQ
Trigger: CTGGACTCTTCCAGTGCCTCACAGGAATACCACATT...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGAGGTGCTGTCTTCATaGAAACTGCTAAAATTTCTA +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLEVLSS*KLLKFL
Trigger: TAGAAATTTTAGCAGTTTTCATGAAGACAGCACCTC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACTTGAACTCACCATCTaGATCTTGGAGTCGGGACTT +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKELELTI*ILESGL
Trigger: AAGTCCCGACTCCAAGATTCAGATGGTGAGTTCAAG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAGTGGGAGGTCTGGGGTaGGATCAAGGGTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGVGGLG*DQGFPV
Trigger: CACAGGAAACCCTTGATCTCACCCCAGACCTCCCAC...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATGGATGACTTGTGGATaGTTCTGCGACCTGGCGATA +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVWMTCG*FCDLAI
Trigger: TATCGCCAGGTCGCAGAATCATCCACAAGTCATCCA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTTGATCCAAATTAACTaGCCAGCTTCTTCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLLIQIN*PASSKR
Trigger: CCTTTTAGAAGAAGCTGGTCAGTTAATTTGGATCAA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGATCCCTCCTGCCACACTaGATCCCAGACCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGSLLPH*IPDLSL
Trigger: AAGGCTCAGGTCTGGGATTCAGTGTGGCAGGAGGGA...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTGTTTCCCAAGTAGCGTaGGTCACGACAGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSVSQVA*VTTVFC
Trigger: ACAGAAGACTGTCGTGACTCACGCTACTTGGGAAAC...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCTCTTTATGACCCGATaGGAGTTTGGAATTATTTAC +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLLFMTR*EFGIIY
Trigger: GTAAATAATTCCAAACTCTCATCGGGTCATAAAGAG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCCTCATAGCTTATTGTaGATGACTGACCAGTTAAAA +
Preference number: 4 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLPHSLL*MTDQLK
Trigger: TTTTAACTGGTCAGTCATTCACAATAAGCTATGAGG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTACAATGGCACTGGAGTaGTCAATGAGGGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSTMALE*SMREGR
Trigger: CCTTCCTTCCCTCATTGAGCACTCCAGTGCCATTGT...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAACCTACTCGAGACTATaGTGTTTGCCTTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVTYSRL*CLPWQE
Trigger: CTCCTGCCAAGGCAAACAGCATAGTCTCGAGTAGGT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAAGCGGCGTTTGTCATTaGTTGTGGTCAGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVSGVCH*LWSEEH
Trigger: ATGCTCCTCTGACCACAAGCAATGACAAACGCCGCT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGAAGGATCTTCCTTGTaGAAAGACACACGGGAACGA +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSEGSSL*KDTRER
Trigger: TCGTTCCCGTGTGTCTTTGCACAAGGAAGATCCTTC...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACTGAGTAATCCTCGCTaGAGAGCTTGTCAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVLSNPR*RACQGQ
Trigger: CTGACCTTGACAAGCTCTGCAGCGAGGATTACTCAG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACAGGATTGGGTATGTTaGGAGAGCTGGCAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVQDWVC*ESWQEG
Trigger: TCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATGTTCATGTTCAGGCTaGCAGATGAGCCTAGGGACA +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVCSCSG*QMSLGT
Trigger: TGTCCCTAGGCTCATCTGCCAGCCTGAACATGAACA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGGTAGGTGTTTCTCCTaGTTCAGAGCTGTTGCTACT +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEGRCFS*FRAVAT
Trigger: AGTAGCAACAGCTCTGAACCAGGAGAAACACCTACC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAGCACCGCACACATCTTaGGGTTCATCTGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGAPHTS*GSSVPG
Trigger: GCCTGGGACAGATGAACCCCAAGATGTGTGCGGTGC...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTAAGGCGAACGGGTCCTaGAGGGCATTTACTCAAGAT +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSKANGS*RAFTQD
Trigger: ATCTTGAGTAAATGCCCTCCAGGACCCGTTCGCCTT...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGGACGTCCATGCCCTTaGAAGAGGAAATTGAGACAC +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSGRPCP*KRKLRH
Trigger: GTGTCTCAATTTCCTCTTCCAAGGGCATGGACGTCC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTGGGGCAGCCACGTGTaGAACAAATCTCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQWGSHV*NKSQSV
Trigger: AACAGATTGAGATTTGTTCCACACGTGGCTGCCCCA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGACTGAGGCAGGACAGATaGCAGCCTGGGTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGLRQDR*QPGWED
Trigger: ATCTTCCCACCCAGGCTGCCATCTGTCCTGCCTCAG...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTCACCATCTGAATCTTaGAGTCGGGACTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSSPSES*SRDFWQ
Trigger: CTGCCAGAAGTCCCGACTCCAAGATTCAGATGGTGA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAACCTGGGGGCAGCTGTaGTGTTTCTGTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGTWGQL*CFCQGP
Trigger: AGGACCCTGACAGAAACACCACAGCTGCCCCCAGGT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGTTTCGAGGCGATCGCTaGCCATTATGTTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGFRGDR*PLCCLL
Trigger: AAGGAGGCAACATAATGGCCAGCGATCGCCTCGAAA...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCCCTTCATCTGTGGCTaGAAGATTCCTCGATGTGTC +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGPFICG*KIPRCV
Trigger: GACACATCGAGGAATCTTCCAGCCACAGATGAAGGG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTAATCGGAATAGCTACTaGGAAGCAGCTCATGCCACC +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSNRNSY*EAAHAT
Trigger: GGTGGCATGAGCTGCTTCCCAGTAGCTATTCCGATT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTTTTTGGACAATTCCTaGGCTCAGCCTAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQFLDNS*AQPNRS
Trigger: TGACCTGTTAGGCTGAGCTCAGGAATTGTCCAAAAA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGACAGGAGGCCTGGAGATaGCCCCAAACTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGQEAWR*PQTFWF
Trigger: GAACCAGAAAGTTTGGGGTCATCTCCAGGCCTCCTG...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGATGATGGGCGGACTGTaGAAATGCCTGGCTACTTTA +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGMMGGL*KCLATL
Trigger: TAAAGTAGCCAGGCATTTTCACAGTCCGCCCATCAT...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTAAGTCATCCAGGTCTTaGCTTTCAGAGATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSKSSRS*LSEMWR
Trigger: CCTCCACATCTCTGAAAGTCAAGACCTGGATGACTT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAACCACATACAGTCTCTaGCACTGCTTCAGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSTTYSL*HCFSRN
Trigger: ATTTCTGCTGAAGCAGTGTCAGAGACTGTATGTGGT...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGCTCCCTCTAAGCAGTaGAGCTCATGGCTATTTAAT +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQAPSKQ*SSWLFN
Trigger: ATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGTGTCTGCTCTTGGACTaGCCAGTCTTGAATTCAAGC +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGCLLLD*PVLNSS
Trigger: GCTTGAATTCAAGACTGGTCAGTCCAAGAGCAGACA...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGAAAAGCCAGCTATGTaGCGACGAACGGAATATCCA +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSEKPAM*RRTEYP
Trigger: TGGATATTCCGTTCGTCGTCACATAGCTGGCTTTTC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTATTTCTCTCTCATCTaGAGGACCTCTCTAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSYFSLI*RTSLGR
Trigger: TCGGCCTAGAGAGGTCCTTCAGATGAGAGAGAAATA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGCATGCACCTTGCACTaGCTTCCTACAGTATTCTAC +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVACTLH*LPTVFY
Trigger: GTAGAATACTGTAGGAAGTCAGTGCAAGGTGCATGC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAATGTCTAACAAGTCCCTaGCAGGTTCATTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKECLTSP*QVHFTA
Trigger: TGCTGTGAAATGAACCTGGCAGGGACTTGTTAGACA...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAAGGAATTGGCCTCTTTaGTCTCCTGATAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVRNWPL*SPDKCC
Trigger: GCAGCACTTATCAGGAGAGCAAAGAGGCCAATTCCT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACGAGACATGGCCACATaGTTCTTTGGTGTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVRDMAT*FFGVVS
Trigger: ACTGACAACACCAAAGAAGCATGTGGCCATGTCTCG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGGACAGACTGGCAGCTaGATTAATGCTTGTTTCGTA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEGQTGS*INACFV
Trigger: TACGAAACAAGCATTAATGCAGCTGCCAGTCTGTCC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTCTTCGGACCACACTTTaGCTTCTGACCATTAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSLRTTL*LLTISQ
Trigger: CTGACTAATGGTCAGAAGGCAAAGTGTGGTCCGAAG...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCATACAAAGTTATGGTaGCAATTAAGTCAACCATCA +
Preference number: 4 (lower is better)
Translates to: GMANALSTHVVRAQRVGLHTKLW*QLSQPS
Trigger: TGATGGTTGACTTAATTGGCACCATAACTTTGTATG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTACAGCAAAGTTCAGCTaGATGTACTCCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSTAKFS*MYSCSF
Trigger: GAAGCTGCAGGAGTACATCCAGCTGAACTTTGCTGT...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAACTGTCACCTGCTTGTaGAAGAGCCCAGAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGTVTCL*KSPEAR
Trigger: TCGGGCTTCTGGGCTCTTCCACAAGCAGGTGACAGT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACTGTGTATTCCAATTTaGGTGCGCTACTTGATCCTG +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKELCIPI*VRYLIL
Trigger: CAGGATCAAGTAGCGCACCCAAATTGGAATACACAG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGAGCTTTCAGGTGCATaGATTCCTGTCATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSELSGA*IPVISR
Trigger: TCTGGAAATGACAGGAATCCATGCACCTGAAAGCTC...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGATCAGTGGCCCAGAGGTaGCAAGAGGTGGCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGSVAQR*QEVACF
Trigger: AAAGCAAGCCACCTCTTGCCACCTCTGGGCCACTGA...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTCTGTCGCTTTCAGCTaGCTTGTTACCACATACAGT +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQSVAFS*LVTTYS
Trigger: ACTGTATGTGGTAACAAGCCAGCTGAAAGCGACAGA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTTATCCCCTTCATCTGTaGCTGGAAGATTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSYPLHL*LEDSSM
Trigger: CATCGAGGAATCTTCCAGCCACAGATGAAGGGGATA...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAGTGCCGGCTTCGCTTTaGTTTTCGCTGCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGVPASL*FSLQEL
Trigger: GAGTTCCTGCAGCGAAAACCAAAGCGAAGCCGGCAC...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAGCTACTGGTCTCTGGTaGGTTCTGCCGAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGATGLW*VLPRDG
Trigger: ACCATCTCTCGGCAGAACCCACCAGAGACCAGTAGC...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGACAGGCTCCAGGGGGATaGTCTTTCTGGACAGCAAAC +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGQAPGG*SFWTAN
Trigger: GTTTGCTGTCCAGAAAGACCATCCCCCTGGAGCCTG...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGATCCGTCCTCTGCAGCTaGTCCATTTGGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGSVLCS*SIWEDG
Trigger: ACCATCTTCCCAAATGGATCAGCTGCAGAGGACGGA...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCCAGTTTTGCCATGCTaGATGATCGTGACATTTCCT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGPVLPC*MIVTFP
Trigger: AGGAAATGTCACGATCATTCAGCATGGCAAAACTGG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATGTGCTTTCGCTTCCTaGATGAGAGTTAGGATGGTA +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVCAFAS*MRVRMV
Trigger: TACCATCCTAACTCTCATTCAGGAAGCGAAAGCACA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAATCTTCTTCATTCTCTaGTTGTGCTTTCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEIFFIL*LCFRFL
Trigger: CAGGAAGCGAAAGCACAATCAGAGAATGAAGAAGAT...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGTTCCTTCTCGGTTTTaGTCCTCAAATGTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSVPSRF*SSNVCL
Trigger: AAGGCACACATTTGAGGAGCAAAACCGAGAAGGAAC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTAGTCAGAAGCATTTCTaGCGGACTCTTCTTAGACAG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSSQKHF*RTLLRQ
Trigger: CTGTCTAAGAAGAGTCCGGCAGAAATGCTTCTGACT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATCCCTGGGAGTATTCTaGCTTTCTAATGGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVSLGVF*LSNGCL
Trigger: CAAACAGCCATTAGAAAGGCAGAATACTCCCAGGGA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCACAGGTATGGCAAATaGACTCTCCACTCATGTTGT +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSHRYGK*TLHSCC
Trigger: ACAACATGAGTGGAGAGTGCATTTGCCATACCTGTG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGGAGACCATTCCATTTaGTCCACATTGCACAAGAAA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEGDHSI*STLHKK
Trigger: TTTCTTGTGCAATGTGGAGCAAATGGAATGGTCTCC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTGTCTGTACCAGTGTTaGCCATTTCAACAACCTGTG +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSCLYQC*PFQQPV
Trigger: CACAGGTTGTTGAAATGGCCAACACTGGTACAGACA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTAGGAGCATCTGTCTTTaGAATTCTATGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSRSICL*NSMLCP
Trigger: GGGACAGAGCATAGAATTCCAAAGACAGATGCTCCT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGTTTGTCATTGCTTGTaGTCAGAGGAGCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSVCHCL*SEEHLS
Trigger: AGACAGATGCTCCTCTGACCACAAGCAATGACAAAC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTGACTTCTTCACAATGTaGTATTCCTGTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSDFFTM*YSCEAL
Trigger: CAGTGCCTCACAGGAATACCACATTGTGAAGAAGTC...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGGCATTTACTCAAGATaGCGTGGACTTTGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQGIYSR*RGLCLK
Trigger: CTTTAAGCAAAGTCCACGCCATCTTGAGTAAATGCC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAGAAGAGGTGCCGAGATaGCCTTGCTCACCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGEEVPR*PCSPVF
Trigger: AAACACTGGTGAGCAAGGCCATCTCGGCACCTCTTC...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGATATCACTGGCTGAACTaGGTGTCTCAGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGYHWLN*VSQQHW
Trigger: CCAGTGCTGCTGAGACACCCAGTTCAGCCAGTGATA...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTCCACTGAAGACGACCTaGCTTGTAACTACATTTCTG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSPLKTT*LVTTFL
Trigger: CAGAAATGTAGTTACAAGCCAGGTCGTCTTCAGTGG...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAATTTCAACTGTTTGTTaGCGAGGGAAACCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVISTVC*RGKPSG
Trigger: GCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAAT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAAGCCCGACCAGTAAATaGCCATTGATTACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGSPTSK*PLITSS
Trigger: GCTGCTGGTAATCAATGGTCATTTACTGGTCGGGCT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGATGCTTGTTTCGTATTaGTTCAGGGTTTCGTCATCT +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQMLVSY*FRVSSS
Trigger: AGATGACGAAACCCTGAATCAATACGAAACAAGCAT...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAGCTCGTCTCCTGGACTaGAATGATATCCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGARLLD*NDIPFI
Trigger: GATGAAGGGGATATCATTTCAGTCCAGGAGACGAGC...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTGCTGAGACTAGAAGTTaGTCCAAATTAACTGACCAG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSAETRS*SKLTDQ
Trigger: CTGGTCAGTTAATTTGGATCAACTTCTAGTCTCAGC...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTGGAAACCCAGTGACTaGCTGACTTGTGATATTTTT +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQWKPSD*LTCDIF
Trigger: AAAAATATCACAAGTCAGTCAGTCACTGGGTTTCCA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACTGGTTCAGAGCTGTTaGTACTGTTGCCATTATAAG +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVLVQSC*YCCHYK
Trigger: CTTATAATGGCAACAGTAGCAACAGCTCTGAACCAG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAAGCAGCAGGCACCAATaGCTAATCCAACTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGSSRHQ*LIQLLA
Trigger: AGCCAAGAGTTGGATTAGGCATTGGTGCCTGCTGCT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAACTTCATCCATTTCCTaGTCGGAAACCTTTGGATTA +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKETSSIS*SETFGL
Trigger: TAATCCAAAGGTTTCCGAGCAGGAAATGGATGAAGT...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACTGATAAGTGCTGCGTaGTATGACTTCATCCATTTC +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVLISAA*YDFIHF
Trigger: GAAATGGATGAAGTCATAGCACGCAGCACTTATCAG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGATTCTGTGGTTTCTTCTaGACACGAGGGCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGFCGFF*TRGPVV
Trigger: AACCACAGGCCCTCGTGTGCAGAAGAAACCACAGAA...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGATCAAGCATGCACCTTaGACTGACTTCCTACAGTAT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGIKHAP*TDFLQY
Trigger: ATACTGTAGGAAGTCAGTGCAAGGTGCATGCTTGAT...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAAGGATTAAAAAGACTTaGGGAAGGAGACCATTCCAT +
Preference number: 4 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKERIKKT*GRRPFH
Trigger: ATGGAATGGTCTCCTTCCGCAAGTCTTTTTAATCCT...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCTGCACAGGTCCTTCTaGGACAGACTTCATAATATT +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGLHRSF*DRLHNI
Trigger: AATATTATGAAGTCTGTCCCAGAAGGACCTGTGCAG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCAATTAGAACAACTGTaGAACAATGGCACTGGAGTG +
Preference number: 4 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGQLEQL*NNGTGV
Trigger: CACTCCAGTGCCATTGTTCCACAGTTGTTCTAATTG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATTACTCAAGATGGCGTaGACTTTGCTTAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPLNFNCLLARETFWQDVLLKMA*TLLKAA
Trigger: TGCTGCTTTAAGCAAAGTCCACGCCATCTTGAGTAA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAAGGATGGATGACTTGTaGATGATTCTGCGACCTGGC +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGRMDDL*MILRPG
Trigger: GCCAGGTCGCAGAATCATCCACAAGTCATCCATCCT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTAAAGACTTGATCCGCTaGTTCACAGAGAAAAATGAG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSKDLIR*FTEKNE
Trigger: CTCATTTTTCTCTGTGAAGCAGCGGATCAAGTCTTT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGACAGCTTATCAGAAGTaGTATTCTGTAAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQTAYQK*YSVKQP
Trigger: AGGCTGTTTTACAGAATAGCACTTCTGATAAGCTGT...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGATATTGCTGCCCTGTTTaGGACTTTCCAAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGYCCPV*DFPSSP
Trigger: AGGGGAACTTGGAAAGTCCCAAACAGGGCAGCAATA...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGATTGGGAAGATGGTCTTaGCAAAAATCCCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGLGRWS*QKSPSV
Trigger: GACAGATGGGGATTTTTGTCAAGACCATCTTCCCAA...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTACTGACCCCAGAGACTaGAAAACAATCAATCAATAT +
Preference number: 4 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSTDPRD*KTINQY
Trigger: ATATTGATTGATTGTTTTTCAGTCTCTGGGGTCAGT...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTTTTCTAATTAATAACTaGACAGGTCCTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSFLINN*TGPSGT
Trigger: TGTCCCAGAAGGACCTGTGCAGTTATTAATTAGAAA...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTAAAATCTTAGTGTCATaGACACAGGTATGGCAAATG +
Preference number: 4 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSKILVS*TQVWQM
Trigger: CATTTGCCATACCTGTGTGCATGACACTAAGATTTT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CAA 72 bp ATACAGTTAAGTCAGGCTTCATGTGTAAGCACAAGCTaGGAGATTTTTATAGTCCGTGTCTGTACCAGTGTT +
Preference number: 4 (lower is better)
Translates to: IQLSQASCVSTS*EIFIVRVCTSV
Trigger: AACACTGGTACAGACACGGACTATAAAAATCTCCAAGCTTGTGCTTACACATGAAGCCTGACTTAACTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR GCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGATGTGGTTCTGTGAAGTaGTTATGTCCGCATGAGTTT +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGCGSVK*LCPHEF
Trigger: AAACTCATGCGGACATAAGCACTTCACAGAACCACA...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
3UTR CAA 72 bp TTTCTAACTAACTCCTGTACCATATTTTCCTTTGTATaGCCAGTTGATGAGAAATCTGGACTCAGACAAGCC +
Preference number: 4 (lower is better)
Translates to: FLTNSCTIFSFV*PVDEKSGLRQA
Trigger: GGCTTGTCTGAGTCCAGATTTCTCATCAACTGGCAATACAAAGGAAAATATGGTACAGGAGTTAGTTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGACTTGTACTCCAGATATaGGGATTAAAAAGACTTGCG +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGLVLQI*GLKRLA
Trigger: CGCAAGTCTTTTTAATCCTCATATCTGGAGTACAAG...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR TCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAAACCATCAAATTCAATaGGATGTGTGGGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGNHQIQ*DVWEDG
Trigger: TCCATCTTCCCACACATCTCATTGAATTTGATGGTT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CCA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAGACCCGATGAGAGTTTaGAATTATTTACCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGDPMRV*NYLPKK
Trigger: TTTCTTAGGTAAATAATTCCAAACTCTCATCGGGTC...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp CCTAATCACCTGCAGGCGGCCCGGGGGCCTGGGGCGGCTGCCAGCTaGCCTCCTGGAACGCGGCTCCTGCAGGACTTCCCGAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PNHLQAARGPGAAAS*PPGTRLLQDFPKAA
Trigger: AGCAGCCTTCGGGAAGTCCTGCAGGAGCCGCGTTCCAGGAGGGCAGCTGGCAGCCGCCCCAGGCCCCCGGGCCGCCTGCAGGTGATTAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502489.5
CDS GCA 90 bp CTCACTCTGTCTGTTCCCTGCCACGGACATGCCGTTCCTAGACGCTaGCGGACTCACCGGCCCGGAGTCAGCACGGGGCGCCCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: LTLSVPCHGHAVPRR*RTHRPGVSTGRPAL
Trigger: GAGGGCAGGGCGCCCCGTGCTGACTCCGGGCCGGTGAGTCCGGCAGCGTCTAGGAACGGCATGTCCGTGGCAGGGAACAGACAGAGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TGCTGCCACATGGCTGGCCAGGCGCGGCTCACTCTGTCTGTTCCCTaGCACGGACATGCCGTTCCTAGACGCTGCCGGACTCACCGGCCC +
Preference number: 5 (lower is better)
Translates to: CCHMAGQARLTLSVP*HGHAVPRRCRTHRP
Trigger: GGGCCGGTGAGTCCGGCAGCGTCTAGGAACGGCATGTCCGTGGCAGGGAACAGACAGAGTGAGCCGCGCCTGGCCAGCCATGTGGCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TGTGAGTGGAGGTGCTGGGAGGCAGGCTGCCCTCCTCCGACGTGCTaGAGCCACTTCCCGGGTGATCCTCGTCCTCAGAACCGGCCACCA +
Preference number: 5 (lower is better)
Translates to: CEWRCWEAGCPPPTC*SHFPGDPRPQNRPP
Trigger: TGGTGGCCGGTTCTGAGGACGAGGATCACCCGGGAAGTGGCTGCAGCACGTCGGAGGAGGGCAGCCTGCCTCCCAGCACCTCCACTCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 90 bp CCTTGTGAGTGGAGGTGCTGGGAGGCAGGCTGCCCTCCTCCGACGTaGTGCAGCCACTTCCCGGGTGATCCTCGTCCTCAGAACCGGCCA +
Preference number: 5 (lower is better)
Translates to: PCEWRCWEAGCPPPT*CSHFPGDPRPQNRP
Trigger: TGGCCGGTTCTGAGGACGAGGATCACCCGGGAAGTGGCTGCAGCACGTCGGAGGAGGGCAGCCTGCCTCCCAGCACCTCCACTCACAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 90 bp GGAGGCAGGCTGCCCTCCTCCGACGTGCTGCAGCCACTTCCCGGGTaGTCCTCGTCCTCAGAACCGGCCACCATGAAGTCTGACAAGGGG +
Preference number: 5 (lower is better)
Translates to: GGRLPSSDVLQPLPG*SSSSEPATMKSDKG
Trigger: CCCCTTGTCAGACTTCATGGTGGCCGGTTCTGAGGACGAGGATCACCCGGGAAGTGGCTGCAGCACGTCGGAGGAGGGCAGCCTGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS GCA 90 bp TGGATGTACTCCTGCAGCTTCTGGATGGCCGCCTGGCAGAGCCGCTaGTCCGGCCCATCCCCACCTTCCTGCAGGCTGTTCTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: WMYSCSFWMAAWQSR*SGPSPPSCRLFCSH
Trigger: GTGGCTGCAGAACAGCCTGCAGGAAGGTGGGGATGGGCCGGAGCAGCGGCTCTGCCAGGCGGCCATCCAGAAGCTGCAGGAGTACATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502824.1
CDS GCA 90 bp GAGGGGGTCTCCTGGCAGGACAGCACCAGCTGGTGTCATTCCCTCTaGTCCAGGTCCCGCTCCCCTGAGGGCAGCCACCCTCCTGGTATT +
Preference number: 5 (lower is better)
Translates to: EGVSWQDSTSWCHSL*SRSRSPEGSHPPGI
Trigger: AATACCAGGAGGGTGGCTGCCCTCAGGGGAGCGGGACCTGGAGCAGAGGGAATGACACCAGCTGGTGCTGTCCTGCCAGGAGACCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp ACCTTGCTGCTGCGTCACCTGGGTGGCCCAGGCTCCCGGAAACAATaGTGCCGGAAGACCGCCTCCCAATGGGAGGCTTGGAGCTCACCG +
Preference number: 5 (lower is better)
Translates to: TLLLRHLGGPGSRKQ*CRKTASQWEAWSSP
Trigger: CGGTGAGCTCCAAGCCTCCCATTGGGAGGCGGTCTTCCGGCAGCATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp CCTTTTTCGCCAGTCGGCCTGGGTTGGGCTGTGTCTGCTGCCACATaGCTGGCCAGGCGCGGCTCACTCTGTCTGTTCCCTGCCACGGAC +
Preference number: 5 (lower is better)
Translates to: PFSPVGLGWAVSAAT*LARRGSLCLFPATD
Trigger: GTCCGTGGCAGGGAACAGACAGAGTGAGCCGCGCCTGGCCAGCCATGTGGCAGCAGACACAGCCCAACCCAGGCCGACTGGCGAAAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp TCCACCAGCTTCCAGGGCTCCCCTTGGGGGCCTCTGCAGAGTCCGTaGGGTTGGCTGCATAGGACGCAGCATCCACCATGCCCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: STSFQGSPWGPLQSP*GWLHRTQHPPCPLG
Trigger: TCCCAGAGGGCATGGTGGATGCTGCGTCCTATGCAGCCAACCTCACGGACTCTGCAGAGGCCCCCAAGGGGAGCCCTGGAAGCTGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 90 bp TGCCGGACTCACCGGCCCGGAGTCAGCACGGGGCGCCCTGCCCTCTaGTCTACACTTAGGAGATTTAGGGGTGGTTGGGCAACCTCTGTC +
Preference number: 5 (lower is better)
Translates to: CRTHRPGVSTGRPAL*STLRRFRGGWATSV
Trigger: GACAGAGGTTGCCCAACCACCCCTAAATCTCCTAAGTGTAGAGCAGAGGGCAGGGCGCCCCGTGCTGACTCCGGGCCGGTGAGTCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp GTTGCCTCCTTTTTCGCCAGTCGGCCTGGGTTGGGCTGTGTCTGCTaGCACATGGCTGGCCAGGCGCGGCTCACTCTGTCTGTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: VASFFASRPGLGCVC*HMAGQARLTLSVPC
Trigger: GCAGGGAACAGACAGAGTGAGCCGCGCCTGGCCAGCCATGTGGCAGCAGACACAGCCCAACCCAGGCCGACTGGCGAAAAAGGAGGCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TTGCTGCTGCGTCACCTGGGTGGCCCAGGCTCCCGGAAACAATGCTaGCGGAAGACCGCCTCCCAATGGGAGGCTTGGAGCTCACCGACA +
Preference number: 5 (lower is better)
Translates to: LLLRHLGGPGSRKQC*RKTASQWEAWSSPT
Trigger: TGTCGGTGAGCTCCAAGCCTCCCATTGGGAGGCGGTCTTCCGGCAGCATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp GCTTGTCAAGGTCAGGCATGCTCAAGGCTCTCAGCTCCTGGAGCTTaGAGCGGGACACGGGCGAGGGCTGCGTGTGGCGTACCGAGGACT +
Preference number: 5 (lower is better)
Translates to: ACQGQACSRLSAPGA*SGTRARAACGVPRT
Trigger: AGTCCTCGGTACGCCACACGCAGCCCTCGCCCGTGTCCCGCTCCAAGCTCCAGGAGCTGAGAGCCTTGAGCATGCCTGACCTTGACAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TCCAGGGCTCCCCTTGGGGGCCTCTGCAGAGTCCGTGAGGTTGGCTaGATAGGACGCAGCATCCACCATGCCCTCTGGGATACTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SRAPLGGLCRVREVG*IGRSIHHALWDTLL
Trigger: GAGGAGAGTATCCCAGAGGGCATGGTGGATGCTGCGTCCTATGCAGCCAACCTCACGGACTCTGCAGAGGCCCCCAAGGGGAGCCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 90 bp GAGCCTGACTGGAGACCTGGCCTTGCACTTGGTGACCCTGGGCGATaGAGGCTGGCTGGGATTCTCTGGCCGACTGACTTGCCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: EPDWRPGLALGDPGR*RLAGILWPTDLPCV
Trigger: GACACAGGGCAAGTCAGTCGGCCAGAGAATCCCAGCCAGCCTGCATCGCCCAGGGTCACCAAGTGCAAGGCCAGGTCTCCAGTCAGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp GGCTGGGAAGACCACCTCTGGATGCCTTTGCCTCGGGGACAACACTaGTTGTCACAGGGACCTGGCTGTCCCGAGAGCGACCCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: GWEDHLWMPLPRGQH*LSQGPGCPESDPGC
Trigger: ACAGCCTGGGTCGCTCTCGGGACAGCCAGGTCCCTGTGACAAGCAGTGTTGTCCCCGAGGCAAAGGCATCCAGAGGTGGTCTTCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp GCCCAGAAGCCCGATGGCTCCCAAGAGTCACGAGGCTGTTGGCTCTaGGTTTTCCAGGCTCCTTGTGAGTGGAGGTGCTGGGAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: AQKPDGSQESRGCWL*VFQAPCEWRCWEAG
Trigger: GCCTGCCTCCCAGCACCTCCACTCACAAGGAGCCTGGAAAACCCAGAGCCAACAGCCTCGTGACTCTTGGGAGCCATCGGGCTTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp GGCGGAGGAGAGGGTTTCGGAGGGCCTGTGGGCTTCCGGGGAGACTaGCTTGTCTGGCAACTGTCACCTGCTTGTGGAAGAGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: GGGEGFGGPVGFRGD*LVWQLSPACGRAQK
Trigger: CTTCTGGGCTCTTCCACAAGCAGGTGACAGTTGCCAGACAAGCCAGTCTCCCCGGAAGCCCACAGGCCCTCCGAAACCCTCTCCTCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp CTCAGCTCCTGGAGCTTGGAGCGGGACACGGGCGAGGGCTGCGTGTaGCGTACCGAGGACTTGTTCCTCTTAACAGGAGAAGCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: LSSWSLERDTGEGCV*RTEDLFLLTGEARV
Trigger: GACCCTGGCTTCTCCTGTTAAGAGGAACAAGTCCTCGGTACGCCACACGCAGCCCTCGCCCGTGTCCCGCTCCAAGCTCCAGGAGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp GCCTGTGGGCTTCCGGGGAGACTGGCTTGTCTGGCAACTGTCACCTaGTTGTGGAAGAGCCCAGAAGCCCGATGGCTCCCAAGAGTCACG +
Preference number: 5 (lower is better)
Translates to: ACGLPGRLACLATVT*LWKSPEARWLPRVT
Trigger: CGTGACTCTTGGGAGCCATCGGGCTTCTGGGCTCTTCCACAAGCAGGTGACAGTTGCCAGACAAGCCAGTCTCCCCGGAAGCCCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 90 bp GCCCTGTCCATTAGCCAGGCTGGGAAGACCACCTCTGGATGCCTTTaGCTCGGGGACAACACTGCTTGTCACAGGGACCTGGCTGTCCCG +
Preference number: 5 (lower is better)
Translates to: ALSISQAGKTTSGCL*LGDNTACHRDLAVP
Trigger: CGGGACAGCCAGGTCCCTGTGACAAGCAGTGTTGTCCCCGAGGCAAAGGCATCCAGAGGTGGTCTTCCCAGCCTGGCTAATGGACAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp GGAGGGTGCCGGCTTCGCTTTGGTTTTCGCTGCAGGAACTCAAGCTaGGTCTCAACAACCTTGCTGCTGCGTCACCTGGGTGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: GGCRLRFGFRCRNSS*VSTTLLLRHLGGPG
Trigger: GCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCAGCGAAAACCAAAGCGAAGCCGGCACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp AAGGCTCTCAGCTCCTGGAGCTTGGAGCGGGACACGGGCGAGGGCTaGGTGTGGCGTACCGAGGACTTGTTCCTCTTAACAGGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: KALSSWSLERDTGEG*VWRTEDLFLLTGEA
Trigger: GGCTTCTCCTGTTAAGAGGAACAAGTCCTCGGTACGCCACACGCAGCCCTCGCCCGTGTCCCGCTCCAAGCTCCAGGAGCTGAGAGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp GCCCTGCTGAGTAATCCTCGCTGCAGAGCTTGTCAAGGTCAGGCATaGTCAAGGCTCTCAGCTCCTGGAGCTTGGAGCGGGACACGGGCG +
Preference number: 5 (lower is better)
Translates to: ALLSNPRCRACQGQA*SRLSAPGAWSGTRA
Trigger: CGCCCGTGTCCCGCTCCAAGCTCCAGGAGCTGAGAGCCTTGAGCATGCCTGACCTTGACAAGCTCTGCAGCGAGGATTACTCAGCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp CATCCACAGCAAAGTTCAGCTGGATGTACTCCTGCAGCTTCTGGATaGCCGCCTGGCAGAGCCGCTGCTCCGGCCCATCCCCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: HPQQSSAGCTPAASG*PPGRAAAPAHPHLP
Trigger: AGGAAGGTGGGGATGGGCCGGAGCAGCGGCTCTGCCAGGCGGCCATCCAGAAGCTGCAGGAGTACATCCAGCTGAACTTTGCTGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502824.1
CDS CCA 90 bp CTGCGGAGTTTTCCTTGCTGGCCACCACAAGCTGCACCATTCCCGTaGCGGAGCGAAGAATGGCCACTGCTTCCTCGTGGGAGAGCCCGA +
Preference number: 5 (lower is better)
Translates to: LRSFPCWPPQAAPFP*RSEEWPLLPRGRAR
Trigger: TCGGGCTCTCCCACGAGGAAGCAGTGGCCATTCTTCGCTCCGCCACGGGAATGGTGCAGCTTGTGGTGGCCAGCAAGGAAAACTCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp GGGCTTCCGGGGAGACTGGCTTGTCTGGCAACTGTCACCTGCTTGTaGAAGAGCCCAGAAGCCCGATGGCTCCCAAGAGTCACGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLPGRLACLATVTCL*KSPEARWLPRVTRL
Trigger: CAGCCTCGTGACTCTTGGGAGCCATCGGGCTTCTGGGCTCTTCCACAAGCAGGTGACAGTTGCCAGACAAGCCAGTCTCCCCGGAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp GGAAGACCGCCTCCCAATGGGAGGCTTGGAGCTCACCGACAAAAATaGGGAAGCCCCGGACTTGGCTACAGGCCGGTCAGCATTGGCCAG +
Preference number: 5 (lower is better)
Translates to: GRPPPNGRLGAHRQK*GSPGLGYRPVSIGQ
Trigger: CTGGCCAATGCTGACCGGCCTGTAGCCAAGTCCGGGGCTTCCCCATTTTTGTCGGTGAGCTCCAAGCCTCCCATTGGGAGGCGGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp GAACTCAAGCTGCGTCTCAACAACCTTGCTGCTGCGTCACCTGGGTaGCCCAGGCTCCCGGAAACAATGCTGCCGGAAGACCGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: ELKLRLNNLAAASPG*PRLPETMLPEDRLP
Trigger: TGGGAGGCGGTCTTCCGGCAGCATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp GCAGGAACTCAAGCTGCGTCTCAACAACCTTGCTGCTGCGTCACCTaGGTGGCCCAGGCTCCCGGAAACAATGCTGCCGGAAGACCGCCT +
Preference number: 5 (lower is better)
Translates to: AGTQAASQQPCCCVT*VAQAPGNNAAGRPP
Trigger: AGGCGGTCTTCCGGCAGCATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp CAGCCACACTTCTCCCAATGCCAGGCTCCAGGGGGATGGTCTTTCTaGACAGCAAACCCTTCCCATTGGCTGTGGGAGGCTCCTGCCGGG +
Preference number: 5 (lower is better)
Translates to: QPHFSQCQAPGGWSF*TANPSHWLWEAPAG
Trigger: CCCGGCAGGAGCCTCCCACAGCCAATGGGAAGGGTTTGCTGTCCAGAAAGACCATCCCCCTGGAGCCTGGCATTGGGAGAAGTGTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp TGCAGCCACTTCCCGGGTGATCCTCGTCCTCAGAACCGGCCACCATaGAGTCTGACAAGGGGCCAGGGACATCGTGGGCAAAGTACTGGG +
Preference number: 5 (lower is better)
Translates to: CSHFPGDPRPQNRPP*SLTRGQGHRGQSTG
Trigger: CCCAGTACTTTGCCCACGATGTCCCTGGCCCCTTGTCAGACTTCATGGTGGCCGGTTCTGAGGACGAGGATCACCCGGGAAGTGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS TCA 90 bp GGCAGCCACCCTCCTGGTATTGTGGGGTGTGCTGGTTTCCGATGCTaGTCGAGTCTTGCTGTAGTCAGGGGGAGCCGCTGCTTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: GSHPPGIVGCAGFRC*SSLAVVRGSRCFLP
Trigger: GGGGAGAAAGCAGCGGCTCCCCCTGACTACAGCAAGACTCGATCAGCATCGGAAACCAGCACACCCCACAATACCAGGAGGGTGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp CATGGCCGTTTCCAAGTTCAGGGTCAGGGCCGTTCTCCAGCTCAGTaGTGGGGTCACTGGACACCTCACAGCCAGCGCTGCCCTTGGATT +
Preference number: 5 (lower is better)
Translates to: HGRFQVQGQGRSPAQ*WGHWTPHSQRCPWI
Trigger: AATCCAAGGGCAGCGCTGGCTGTGAGGTGTCCAGTGACCCCAGCACTGAGCTGGAGAACGGCCCTGACCCTGAACTTGGAAACGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513852.1
CDS GCA 90 bp CAGTTCCTTCTTCCACCAGCTTCCAGGGCTCCCCTTGGGGGCCTCTaGAGAGTCCGTGAGGTTGGCTGCATAGGACGCAGCATCCACCAT +
Preference number: 5 (lower is better)
Translates to: QFLLPPASRAPLGGL*RVREVGCIGRSIHH
Trigger: ATGGTGGATGCTGCGTCCTATGCAGCCAACCTCACGGACTCTGCAGAGGCCCCCAAGGGGAGCCCTGGAAGCTGGTGGAAGAAGGAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp GGCCGTTTCCAAGTTCAGGGTCAGGGCCGTTCTCCAGCTCAGTGCTaGGGTCACTGGACACCTCACAGCCAGCGCTGCCCTTGGATTCTT +
Preference number: 5 (lower is better)
Translates to: GRFQVQGQGRSPAQC*GHWTPHSQRCPWIL
Trigger: AAGAATCCAAGGGCAGCGCTGGCTGTGAGGTGTCCAGTGACCCCAGCACTGAGCTGGAGAACGGCCCTGACCCTGAACTTGGAAACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513852.1
CDS CCA 90 bp CATTGGCTCTGCCAGTCAGGTTCACTGTCTGTGAGCCACTGGGCTTaGCCTCAGCCTCGGATCTCTTGCAGTGGGGGCTTACCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: HWLCQSGSLSVSHWA*PQPRISCSGGLPWP
Trigger: TGGCCAGGGTAAGCCCCCACTGCAAGAGATCCGAGGCTGAGGCCAAGCCCAGTGGCTCACAGACAGTGAACCTGACTGGCAGAGCCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp CTTGCACTTGGTGACCCTGGGCGATGCAGGCTGGCTGGGATTCTCTaGCCGACTGACTTGCCCTGTGTCTACAGAGGTCTTGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: LALGDPGRCRLAGIL*PTDLPCVYRGLAGV
Trigger: GACCCCAGCAAGACCTCTGTAGACACAGGGCAAGTCAGTCGGCCAGAGAATCCCAGCCAGCCTGCATCGCCCAGGGTCACCAAGTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp ACTGGAGACCTGGCCTTGCACTTGGTGACCCTGGGCGATGCAGGCTaGCTGGGATTCTCTGGCCGACTGACTTGCCCTGTGTCTACAGAG +
Preference number: 5 (lower is better)
Translates to: TGDLALHLVTLGDAG*LGFSGRLTCPVSTE
Trigger: CTCTGTAGACACAGGGCAAGTCAGTCGGCCAGAGAATCCCAGCCAGCCTGCATCGCCCAGGGTCACCAAGTGCAAGGCCAGGTCTCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp CCCCGCTCCTGCCACTCCTGCTCCTGCAAAGGGAAACCCTGCCCCTaGCTATGGCTGTCTTCACAAACACACTCGCTGCCTCTACTGGCA +
Preference number: 5 (lower is better)
Translates to: PRSCHSCSCKGKPCP*LWLSSQTHSLPLLA
Trigger: TGCCAGTAGAGGCAGCGAGTGTGTTTGTGAAGACAGCCATAGCCAGGGGCAGGGTTTCCCTTTGCAGGAGCAGGAGTGGCAGGAGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAACACCTGCTCGCGGCTaGGCCGAGGCTCCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEATPARG*AEAPAA
Trigger: AGCCGCGGGAGCCTCGGCCAAGCCGCGAGCAGGTGT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp AACTGCCTTCATCGGAACCTCCCGCTGAGGCTCCCCCACTGGTATTaGAGTTCGGGGAGGCGGATCTGCTCATGTGTGTGGGTGTCGAGC +
Preference number: 5 (lower is better)
Translates to: NCLHRNLPLRLPHWY*SSGRRICSCVWVSS
Trigger: GCTCGACACCCACACACATGAGCAGATCCGCCTCCCCGAACTTCAATACCAGTGGGGGAGCCTCAGCGGGAGGTTCCGATGAAGGCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 90 bp ACTGGTCTCTGGTGGGTTCTGCCGAGAGATGGTCAGTGTCATGATTaGGGGAGACTTGGCCATCTGGGGCAGGAGGGTGCCGGCTTCGCT +
Preference number: 5 (lower is better)
Translates to: TGLWWVLPRDGQCHD*GRLGHLGQEGAGFA
Trigger: AGCGAAGCCGGCACCCTCCTGCCCCAGATGGCCAAGTCTCCCTCAATCATGACACTGACCATCTCTCGGCAGAACCCACCAGAGACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp GTTTTCGCTGCAGGAACTCAAGCTGCGTCTCAACAACCTTGCTGCTaGGTCACCTGGGTGGCCCAGGCTCCCGGAAACAATGCTGCCGGA +
Preference number: 5 (lower is better)
Translates to: VFAAGTQAASQQPCC*VTWVAQAPGNNAAG
Trigger: TCCGGCAGCATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCAGCGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TGGCCATCTGGGGCAGGAGGGTGCCGGCTTCGCTTTGGTTTTCGCTaGAGGAACTCAAGCTGCGTCTCAACAACCTTGCTGCTGCGTCAC +
Preference number: 5 (lower is better)
Translates to: WPSGAGGCRLRFGFR*RNSSCVSTTLLLRH
Trigger: GTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCAGCGAAAACCAAAGCGAAGCCGGCACCCTCCTGCCCCAGATGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp TGCTGGCCACCACAAGCTGCACCATTCCCGTGGCGGAGCGAAGAATaGCCACTGCTTCCTCGTGGGAGAGCCCGACCAGTAAATGACCAT +
Preference number: 5 (lower is better)
Translates to: CWPPQAAPFPWRSEE*PLLPRGRARPVNDH
Trigger: ATGGTCATTTACTGGTCGGGCTCTCCCACGAGGAAGCAGTGGCCATTCTTCGCTCCGCCACGGGAATGGTGCAGCTTGTGGTGGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp AGCAGTGCCCCGAGACATGGCCACATGCTTCTTTGGTGTTGTCAGTaGATGGCAGCATGGAGAGGCTGGCCTGCGGTGCCCTTGAGGACA +
Preference number: 5 (lower is better)
Translates to: SSAPRHGHMLLWCCQ*MAAWRGWPAVPLRT
Trigger: TGTCCTCAAGGGCACCGCAGGCCAGCCTCTCCATGCTGCCATCCACTGACAACACCAAAGAAGCATGTGGCCATGTCTCGGGGCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp GGGGTGGTTGGGCAACCTCTGTCGGGTTCAGAGAGGACAGCCATGTaGAACCTGCTCCACATGCCTTGCTCAGGAACAGGCTTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: GVVGQPLSGSERTAM*NLLHMPCSGTGLGE
Trigger: CTCTCCCAAGCCTGTTCCTGAGCAAGGCATGTGGAGCAGGTTCCACATGGCTGTCCTCTCTGAACCCGACAGAGGTTGCCCAACCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACGCAATCCCGGTGCCTaGGGTTCGGCCTGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEARNPGA*GSACGS
Trigger: GGAGCCGCAGGCCGAACCCAAGGCACCGGGATTGCG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp ACTTCCCGGGTGATCCTCGTCCTCAGAACCGGCCACCATGAAGTCTaGCAAGGGGCCAGGGACATCGTGGGCAAAGTACTGGGAGAGTTC +
Preference number: 5 (lower is better)
Translates to: TSRVILVLRTGHHEV*QGARDIVGKVLGEF
Trigger: GAACTCTCCCAGTACTTTGCCCACGATGTCCCTGGCCCCTTGTCAGACTTCATGGTGGCCGGTTCTGAGGACGAGGATCACCCGGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS TCA 90 bp CAGATCGCATGGATCATTGGCTCTGCCAGTCAGGTTCACTGTCTGTaGGCCACTGGGCTTGGCCTCAGCCTCGGATCTCTTGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: QIAWIIGSASQVHCL*ATGLGLSLGSLAVG
Trigger: CCCCACTGCAAGAGATCCGAGGCTGAGGCCAAGCCCAGTGGCTCACAGACAGTGAACCTGACTGGCAGAGCCAATGATCCATGCGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 90 bp GCTCAGGAACAGGCTTGGGAGAGGTCAGGGGCGAGACAAATGTCCTaGTGCTCGTGTCAGACACTGAGGGTTTCAGTGGCCCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: AQEQAWERSGARQMS*CSCQTLRVSVAQRW
Trigger: CCACCTCTGGGCCACTGAAACCCTCAGTGTCTGACACGAGCATCAGGACATTTGTCTCGCCCCTGACCTCTCCCAAGCCTGTTCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp TGCTACTGGTCTCTGGTGGGTTCTGCCGAGAGATGGTCAGTGTCATaGTTGAGGGAGACTTGGCCATCTGGGGCAGGAGGGTGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: CYWSLVGSAERWSVS*LRETWPSGAGGCRL
Trigger: AAGCCGGCACCCTCCTGCCCCAGATGGCCAAGTCTCCCTCAATCATGACACTGACCATCTCTCGGCAGAACCCACCAGAGACCAGTAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp GCCCTCCTGAGAGCCACTGTCCCCCGTCTGGGAAGACGGAGACCTTaGTGCAGAAGCATCCAGCTCCTTGATGAAGCTGTCAATGTCCGT +
Preference number: 5 (lower is better)
Translates to: ALLRATVPRLGRRRP*CRSIQLLDEAVNVR
Trigger: ACGGACATTGACAGCTTCATCAAGGAGCTGGATGCTTCTGCAGCAAGGTCTCCGTCTTCCCAGACGGGGGACAGTGGCTCTCAGGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp CTCTGTCGGGTTCAGAGAGGACAGCCATGTGGAACCTGCTCCACATaGCTTGCTCAGGAACAGGCTTGGGAGAGGTCAGGGGCGAGACAA +
Preference number: 5 (lower is better)
Translates to: LCRVQRGQPCGTCST*LAQEQAWERSGARQ
Trigger: TTGTCTCGCCCCTGACCTCTCCCAAGCCTGTTCCTGAGCAAGGCATGTGGAGCAGGTTCCACATGGCTGTCCTCTCTGAACCCGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TTGGGCAACCTCTGTCGGGTTCAGAGAGGACAGCCATGTGGAACCTaGTCCACATGCCTTGCTCAGGAACAGGCTTGGGAGAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LGNLCRVQRGQPCGT*STCLAQEQAWERSG
Trigger: CCCTGACCTCTCCCAAGCCTGTTCCTGAGCAAGGCATGTGGAGCAGGTTCCACATGGCTGTCCTCTCTGAACCCGACAGAGGTTGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TTGGTTTTCGCTGCAGGAACTCAAGCTGCGTCTCAACAACCTTGCTaGTGCGTCACCTGGGTGGCCCAGGCTCCCGGAAACAATGCTGCC +
Preference number: 5 (lower is better)
Translates to: LVFAAGTQAASQQPC*CVTWVAQAPGNNAA
Trigger: GGCAGCATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCAGCGAAAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp TGTCTGGCAACTGTCACCTGCTTGTGGAAGAGCCCAGAAGCCCGATaGCTCCCAAGAGTCACGAGGCTGTTGGCTCTGGGTTTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: CLATVTCLWKSPEAR*LPRVTRLLALGFPG
Trigger: GCCTGGAAAACCCAGAGCCAACAGCCTCGTGACTCTTGGGAGCCATCGGGCTTCTGGGCTCTTCCACAAGCAGGTGACAGTTGCCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp ATGGATCATTGGCTCTGCCAGTCAGGTTCACTGTCTGTGAGCCACTaGGCTTGGCCTCAGCCTCGGATCTCTTGCAGTGGGGGCTTACCC +
Preference number: 5 (lower is better)
Translates to: MDHWLCQSGSLSVSH*AWPQPRISCSGGLP
Trigger: GGGTAAGCCCCCACTGCAAGAGATCCGAGGCTGAGGCCAAGCCCAGTGGCTCACAGACAGTGAACCTGACTGGCAGAGCCAATGATCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp GGGCGCCCTGCCCTCTGCTCTACACTTAGGAGATTTAGGGGTGGTTaGGCAACCTCTGTCGGGTTCAGAGAGGACAGCCATGTGGAACCT +
Preference number: 5 (lower is better)
Translates to: GRPALCSTLRRFRGG*ATSVGFREDSHVEP
Trigger: AGGTTCCACATGGCTGTCCTCTCTGAACCCGACAGAGGTTGCCCAACCACCCCTAAATCTCCTAAGTGTAGAGCAGAGGGCAGGGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp GAGGGAGACTTGGCCATCTGGGGCAGGAGGGTGCCGGCTTCGCTTTaGTTTTCGCTGCAGGAACTCAAGCTGCGTCTCAACAACCTTGCT +
Preference number: 5 (lower is better)
Translates to: EGDLAIWGRRVPASL*FSLQELKLRLNNLA
Trigger: AGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCAGCGAAAACCAAAGCGAAGCCGGCACCCTCCTGCCCCAGATGGCCAAGTCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGCCAGTCGGCCTGGGTaGGGCTGTGTCTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: GMANALSTHVVRAQRVGLASRPG*GCVCCH
Trigger: GTGGCAGCAGACACAGCCCAACCCAGGCCGACTGGC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp ACTGGCCCCACTGACATCAACTCCAACCATCAGCTGCCCATTCAGTaGGAGGATCTCATCCCGCAGTCGGACCTTCCCACTCTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: TGPTDINSNHQLPIQ*EDLIPQSDLPTLPC
Trigger: GCAGGGAAGAGTGGGAAGGTCCGACTGCGGGATGAGATCCTCTCACTGAATGGGCAGCTGATGGTTGGAGTTGATGTCAGTGGGGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp TGGGTTGTTGCCCCAGCTCTGATGCAGCTTTGGGCAGGTTCTCTGTaGGGTGGCTGGCATCCAGATGGGACAGAGCACTGGCTAGTTCAC +
Preference number: 5 (lower is better)
Translates to: WVVAPALMQLWAGSL*GGWHPDGTEHWLVH
Trigger: GTGAACTAGCCAGTGCTCTGTCCCATCTGGATGCCAGCCACCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000503961.1
CDS TCA 90 bp AGGGGACCAGCCGTCCCTGGCAGAAGCTCGTGGGGCTTCAGTGAGTaGCTCAGGGTCAGAAGAAGAATCCTCAGCATCGCCATACATGGA +
Preference number: 5 (lower is better)
Translates to: RGPAVPGRSSWGFSE*LRVRRRILSIAIHG
Trigger: TCCATGTATGGCGATGCTGAGGATTCTTCTTCTGACCCTGAGTCACTCACTGAAGCCCCACGAGCTTCTGCCAGGGACGGCTGGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp GATGTCGGGTGTAGAAGAGCCAGTCATGGGTTGTTGCCCCAGCTCTaGTGCAGCTTTGGGCAGGTTCTCTGTGAGGTGGCTGGCATCCAG +
Preference number: 5 (lower is better)
Translates to: DVGCRRASHGLLPQL*CSFGQVLCEVAGIQ
Trigger: CTGGATGCCAGCCACCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAACCCATGACTGGCTCTTCTACACCCGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503961.1
CDS TCA 90 bp ACACCTAAGCCAAGCAGCAGCCATAACAACAGCAGCATTCACAGCTaGGCAGGAACGCCGGCCCTCATGGTGGTCTGGGAAAGACGCCGA +
Preference number: 5 (lower is better)
Translates to: TPKPSSSHNNSSIHS*AGTPALMVVWERRR
Trigger: TCGGCGTCTTTCCCAGACCACCATGAGGGCCGGCGTTCCTGCTCAGCTGTGAATGCTGCTGTTGTTATGGCTGCTGCTTGGCTTAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS TCA 90 bp TCTGGCCCCACTGACATCAACTCCAACCATCAGCTGCCCATTCAGTaGGAGGATCTCATCCCGCAGTCGGACCTTCCCACTCTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: SGPTDINSNHQLPIQ*EDLIPQSDLPTLPC
Trigger: GCAGGGAAGAGTGGGAAGGTCCGACTGCGGGATGAGATCCTCTCACTGAATGGGCAGCTGATGGTTGGAGTTGATGTCAGTGGGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS GCA 90 bp CACTCTTCCCTGCTGGGCTGTTCTTCCTCAGCTCTGTCACCCAGATaGAGCCCACATCCAGCACAGGACCCTGGTGGGTTTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: HSSLLGCSSSALSPR*SPHPAQDPGGFSSS
Trigger: AGAAGAGGAAAACCCACCAGGGTCCTGTGCTGGATGTGGGCTGCATCTGGGTGACAGAGCTGAGGAAGAACAGCCCAGCAGGGAAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502824.1
CDS GCA 90 bp AAGTGGCCTGGACTCTCGAGTCCAGATCGCATGGATCATTGGCTCTaGCAGTCAGGTTCACTGTCTGTGAGCCACTGGGCTTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: KWPGLSSPDRMDHWL*QSGSLSVSHWAWPQ
Trigger: CTGAGGCCAAGCCCAGTGGCTCACAGACAGTGAACCTGACTGGCAGAGCCAATGATCCATGCGATCTGGACTCGAGAGTCCAGGCCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 90 bp CTCCTGAGAGCCACTGTCCCCCGTCTGGGAAGACGGAGACCTTGCTaGAGAAGCATCCAGCTCCTTGATGAAGCTGTCAATGTCCGTCAC +
Preference number: 5 (lower is better)
Translates to: LLRATVPRLGRRRPC*RSIQLLDEAVNVRH
Trigger: GTGACGGACATTGACAGCTTCATCAAGGAGCTGGATGCTTCTGCAGCAAGGTCTCCGTCTTCCCAGACGGGGGACAGTGGCTCTCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp GCTTTGGTTTTCGCTGCAGGAACTCAAGCTGCGTCTCAACAACCTTaGTGCTGCGTCACCTGGGTGGCCCAGGCTCCCGGAAACAATGCT +
Preference number: 5 (lower is better)
Translates to: ALVFAAGTQAASQQP*CCVTWVAQAPGNNA
Trigger: AGCATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCAGCGAAAACCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp TGTTGCCCCAGCTCTGATGCAGCTTTGGGCAGGTTCTCTGTGAGGTaGCTGGCATCCAGATGGGACAGAGCACTGGCTAGTTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: CCPSSDAALGRFSVR*LASRWDRALASSQL
Trigger: CAGCTGTGAACTAGCCAGTGCTCTGTCCCATCTGGATGCCAGCCACCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000503961.1
CDS CCA 90 bp TTAATGACAGAACTTTGGCTGAGGCAGGACAGATGGCAGCCTGGGTaGGAAGATGAGCAGGACTCGAGGGTGGATTGGGGCAGCCACGTG +
Preference number: 5 (lower is better)
Translates to: LMTELWLRQDRWQPG*EDEQDSRVDWGSHV
Trigger: CACGTGGCTGCCCCAATCCACCCTCGAGTCCTGCTCATCTTCCCACCCAGGCTGCCATCTGTCCTGCCTCAGCCAAAGTTCTGTCATTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp GGGGCAGCTGTGGTGTTTCTGTCAGGGTCCTCGTGGTCGGCTACATaGAGCCGCTGTGACACTGCCTTAGAAAGTGTTTTGTGGGAGGTC +
Preference number: 5 (lower is better)
Translates to: GAAVVFLSGSSWSAT*SRCDTALESVLWEV
Trigger: GACCTCCCACAAAACACTTTCTAAGGCAGTGTCACAGCGGCTCCATGTAGCCGACCACGAGGACCCTGACAGAAACACCACAGCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp CCAATCATGGGAGGAAGGTTGACTCGTTACAGCACATCCGTGGGGTaGAAGGCCCAGCAGCCTCTCCAGGTGATGTCGGGTGTAGAAGAG +
Preference number: 5 (lower is better)
Translates to: PIMGGRLTRYSTSVG*KAQQPLQVMSGVEE
Trigger: CTCTTCTACACCCGACATCACCTGGAGAGGCTGCTGGGCCTTCCACCCCACGGATGTGCTGTAACGAGTCAACCTTCCTCCCATGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503961.1
CDS TCA 90 bp AGAGGTCAGGGGCGAGACAAATGTCCTGATGCTCGTGTCAGACACTaGGGGTTTCAGTGGCCCAGAGGTGGCAAGAGGTGGCTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: RGQGRDKCPDARVRH*GFQWPRGGKRWLAF
Trigger: GAAAGCAAGCCACCTCTTGCCACCTCTGGGCCACTGAAACCCTCAGTGTCTGACACGAGCATCAGGACATTTGTCTCGCCCCTGACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TTCACAATGTGGTATTCCTGTGAGGCACTGGAAGAGTCCAGCAGCTaGGGGAGGGAGTGTTTCCGGCCATCTCGGGAGACCTCCAACATC +
Preference number: 5 (lower is better)
Translates to: FTMWYSCEALEESSS*GRECFRPSRETSNI
Trigger: GATGTTGGAGGTCTCCCGAGATGGCCGGAAACACTCCCTCCCGCAGCTGCTGGACTCTTCCAGTGCCTCACAGGAATACCACATTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 90 bp AGCAGGCGGCCTTCTCACGGGGACTGGCCACCGACTCTCTCGGAGTaGTGTATTTTAATGACAGAACTTTGGCTGAGGCAGGACAGATGG +
Preference number: 5 (lower is better)
Translates to: SRRPSHGDWPPTLSE*CILMTELWLRQDRW
Trigger: CCATCTGTCCTGCCTCAGCCAAAGTTCTGTCATTAAAATACAGCACTCCGAGAGAGTCGGTGGCCAGTCCCCGTGAGAAGGCCGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp ATATATGCCCTGTCCATTAGCCAGGCTGGGAAGACCACCTCTGGATaGCTTTGCCTCGGGGACAACACTGCTTGTCACAGGGACCTGGCT +
Preference number: 5 (lower is better)
Translates to: IYALSISQAGKTTSG*LCLGDNTACHRDLA
Trigger: AGCCAGGTCCCTGTGACAAGCAGTGTTGTCCCCGAGGCAAAGGCATCCAGAGGTGGTCTTCCCAGCCTGGCTAATGGACAGGGCATATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp AGACATGGCCACATGCTTCTTTGGTGTTGTCAGTGGATGGCAGCATaGAGAGGCTGGCCTGCGGTGCCCTTGAGGACACAGAATCTGCTC +
Preference number: 5 (lower is better)
Translates to: RHGHMLLWCCQWMAA*RGWPAVPLRTQNLL
Trigger: GAGCAGATTCTGTGTCCTCAAGGGCACCGCAGGCCAGCCTCTCCATGCTGCCATCCACTGACAACACCAAAGAAGCATGTGGCCATGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp AGGACAGATGGCAGCCTGGGTGGGAAGATGAGCAGGACTCGAGGGTaGATTGGGGCAGCCACGTGTGGAACAAATCTCAATCTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: RTDGSLGGKMSRTRG*IGAATCGTNLNLFL
Trigger: GAGGAACAGATTGAGATTTGTTCCACACGTGGCTGCCCCAATCCACCCTCGAGTCCTGCTCATCTTCCCACCCAGGCTGCCATCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp TCGGCTACATGGAGCCGCTGTGACACTGCCTTAGAAAGTGTTTTGTaGGAGGTCTGGGGTGAGATCAAGGGTTTCCTGTGGTCCGTCCCC +
Preference number: 5 (lower is better)
Translates to: SATWSRCDTALESVL*EVWGEIKGFLWSVP
Trigger: GGGGACGGACCACAGGAAACCCTTGATCTCACCCCAGACCTCCCACAAAACACTTTCTAAGGCAGTGTCACAGCGGCTCCATGTAGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCCGGGGTCGTTCCTCTaGGTTGTGGACGTCCATGCC +
Preference number: 5 (lower is better)
Translates to: GMANALSTHVVRAQRVGLPGSFL*VVDVHA
Trigger: GGCATGGACGTCCACAACCAAGAGGAACGACCCCGG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTGTGAGCCACTGGGCTaGGCCTCAGCCTCGGATCTC +
Preference number: 5 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLCEPLG*ASASDL
Trigger: GAGATCCGAGGCTGAGGCCAAGCCCAGTGGCTCACA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp TGGGGTCCAGCCACCTCCTTGAGAGAATCTGGGCCATTTTCTAGCTaGAAGACATGGCCGTTTCCAAGTTCAGGGTCAGGGCCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: WGPATSLRESGPFSS*KTWPFPSSGSGPFS
Trigger: GGAGAACGGCCCTGACCCTGAACTTGGAAACGGCCATGTCTTTCAGCTAGAAAATGGCCCAGATTCTCTCAAGGAGGTGGCTGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513852.1
CDS TCA 90 bp CAGGATTTGATCCCCGCGGCTCAGGTTGCTCTCCATCTTGGCCACTaGTCCTGGAGCAAGGCTGTGAATGTAGATGCCAGGAGGACTGTT +
Preference number: 5 (lower is better)
Translates to: QDLIPAAQVALHLGH*SWSKAVNVDARRTV
Trigger: AACAGTCCTCCTGGCATCTACATTCACAGCCTTGCTCCAGGATCAGTGGCCAAGATGGAGAGCAACCTGAGCCGCGGGGATCAAATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 90 bp TCACCAGTGTTTTCCGGGGTCGTTCCTCTTGGTTGTGGACGTCCATaGCCTTGGAAGAGGAAATTGAGACACGCCTCGGGTCATCCTCTG +
Preference number: 5 (lower is better)
Translates to: SPVFSGVVPLGCGRP*PWKRKLRHASGHPL
Trigger: CAGAGGATGACCCGAGGCGTGTCTCAATTTCCTCTTCCAAGGGCATGGACGTCCACAACCAAGAGGAACGACCCCGGAAAACACTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 90 bp CCTCTAAGTCCACTGAGCTACCAAGAAGAGGTGCCGAGATGGCCTTaGTCACCAGTGTTTTCCGGGGTCGTTCCTCTTGGTTGTGGACGT +
Preference number: 5 (lower is better)
Translates to: PLSPLSYQEEVPRWP*SPVFSGVVPLGCGR
Trigger: ACGTCCACAACCAAGAGGAACGACCCCGGAAAACACTGGTGAGCAAGGCCATCTCGGCACCTCTTCTTGGTAGCTCAGTGGACTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 90 bp CGGGCCCCCAGCTGGACGCTGTCAGTGTATGGTAAGGAATATAACTaGATAGGACCGGGTAGACCTGGGTTAGGGAGACTGAAGAACAGG +
Preference number: 5 (lower is better)
Translates to: RAPSWTLSVYGKEYN*IGPGRPGLGRLKNR
Trigger: CCTGTTCTTCAGTCTCCCTAACCCAGGTCTACCCGGTCCTATGCAGTTATATTCCTTACCATACACTGACAGCGTCCAGCTGGGGGCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CCA 90 bp GGGGTCCCTGGCCATCATCAGCTTTGCCTGTGTTCATGTTCAGGCTaGCAGATGAGCCTAGGGACACCTACTCGAGACTATGCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: GVPGHHQLCLCSCSG*QMSLGTPTRDYAVC
Trigger: GCAAACAGCATAGTCTCGAGTAGGTGTCCCTAGGCTCATCTGCCAGCCTGAACATGAACACAGGCAAAGCTGATGATGGCCAGGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS CCA 90 bp GATGCAGCTTTGGGCAGGTTCTCTGTGAGGTGGCTGGCATCCAGATaGGACAGAGCACTGGCTAGTTCACAGCTGGTAGAGACACAAGCA +
Preference number: 5 (lower is better)
Translates to: DAALGRFSVRWLASR*DRALASSQLVETQA
Trigger: TGCTTGTGTCTCTACCAGCTGTGAACTAGCCAGTGCTCTGTCCCATCTGGATGCCAGCCACCTCACAGAGAACCTGCCCAAAGCTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000503961.1
CDS CCA 90 bp GAGCTTTCAGGTGCATGGATTCCTGTCATTTCCAGAGCCTTACTGTaGTTACCTGGAGCTCCCTGTCTCTGCTCCTGGGATGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: ELSGAWIPVISRALL*LPGAPCLCSWDVRG
Trigger: CCCCCTCACATCCCAGGAGCAGAGACAGGGAGCTCCAGGTAACCACAGTAAGGCTCTGGAAATGACAGGAATCCATGCACCTGAAAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp AGATGGCAGCCTGGGTGGGAAGATGAGCAGGACTCGAGGGTGGATTaGGGCAGCCACGTGTGGAACAAATCTCAATCTGTTCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: RWQPGWEDEQDSRVD*GSHVWNKSQSVPLL
Trigger: CAGAAGAGGAACAGATTGAGATTTGTTCCACACGTGGCTGCCCCAATCCACCCTCGAGTCCTGCTCATCTTCCCACCCAGGCTGCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp GTCCCAGCATCTCTACTGTGCAGCTTACTGCACCGGGCCCCCAGCTaGACGCTGTCAGTGTATGGTAAGGAATATAACTGCATAGGACCG +
Preference number: 5 (lower is better)
Translates to: VPASLLCSLLHRAPS*TLSVYGKEYNCIGP
Trigger: CGGTCCTATGCAGTTATATTCCTTACCATACACTGACAGCGTCCAGCTGGGGGCCCGGTGCAGTAAGCTGCACAGTAGAGATGCTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTCTTCAGGGGCCTTGTaGGCAGGAGGCCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLSSGAL*AGGLEM
Trigger: CATCTCCAGGCCTCCTGCCAACAAGGCCCCTGAAGA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTGGCCTGCGGTGCCCTaGAGGACACAGAATCTGCTC +
Preference number: 5 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLWPAVP*RTQNLL
Trigger: GAGCAGATTCTGTGTCCTCAAGGGCACCGCAGGCCA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCCTGCTCCACATGCCTaGCTCAGGAACAGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: GMANALSTHVVRAQRVGLPAPHA*LRNRLG
Trigger: CCCAAGCCTGTTCCTGAGCAAGGCATGTGGAGCAGG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACACCTCTGGATGCCTTaGCCTCGGGGACAACACTGC +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAHLWMP*PRGQHC
Trigger: GCAGTGTTGTCCCCGAGGCAAAGGCATCCAGAGGTG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGAGCAAACCCTTCCCATaGGCTGTGGGAGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLSKPFP*AVGGSC
Trigger: GCAGGAGCCTCCCACAGCCAATGGGAAGGGTTTGCT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp CGAAGAATGGCCACTGCTTCCTCGTGGGAGAGCCCGACCAGTAAATaGCCATTGATTACCAGCAGCTCATCTCCTAAGGACAGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: RRMATASSWESPTSK*PLITSSSSPKDSLP
Trigger: TGGCAGGCTGTCCTTAGGAGATGAGCTGCTGGTAATCAATGGTCATTTACTGGTCGGGCTCTCCCACGAGGAAGCAGTGGCCATTCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 90 bp TACTCAAGATGGCGTGGACTTTGCTTAAAGCAGCATGGCGGACGTTaGCGGAGTTCACTTCCAGGATTTGATCCCCGCGGCTCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: YSRWRGLCLKQHGGR*RSSLPGFDPRGSGC
Trigger: GCAACCTGAGCCGCGGGGATCAAATCCTGGAAGTGAACTCCGTCAACGTCCGCCATGCTGCTTTAAGCAAAGTCCACGCCATCTTGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS TCA 90 bp AGGATGGATGACTTGTGGATGATTCTGCGACCTGGCGATAGAGCCTaGTTTCACTCTTCTCCTGACAGTTGCCCTGGGCCAAGCACCCTC +
Preference number: 5 (lower is better)
Translates to: RMDDLWMILRPGDRA*FHSSPDSCPGPSTL
Trigger: GAGGGTGCTTGGCCCAGGGCAACTGTCAGGAGAAGAGTGAAATCAGGCTCTATCGCCAGGTCGCAGAATCATCCACAAGTCATCCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp TCTTCTAAAAGGCAGATCCTGGGCAGCTTCACCCGTATCACTGGCTaGACTGGGTGTCTCAGCAGCACTGGTTTTAGGGCCACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSKRQILGSFTRITG*TGCLSSTGFRATSS
Trigger: GGAGGAAGTGGCCCTAAAACCAGTGCTGCTGAGACACCCAGTTCAGCCAGTGATACGGGTGAAGCTGCCCAGGATCTGCCTTTTAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp CTTTTCTCTGGAAACGTTCGAAATGCCCAATCATGGGAGGAAGGTTaGCTCGTTACAGCACATCCGTGGGGTGGAAGGCCCAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LFSGNVRNAQSWEEG*LVTAHPWGGRPSSL
Trigger: GAGGCTGCTGGGCCTTCCACCCCACGGATGTGCTGTAACGAGTCAACCTTCCTCCCATGATTGGGCATTTCGAACGTTTCCAGAGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503961.1
CDS TCA 90 bp AGGAAACTGAGCGAGGTTAAGCCCTCCAGGCGCTCAGCGTTTGATTaGTTGCTCTGCAGGGTCTGCTTCAAGACCAGAGGCCCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: RKLSEVKPSRRSAFD*LLCRVCFKTRGPEV
Trigger: AACTTCAGGGCCTCTGGTCTTGAAGCAGACCCTGCAGAGCAATCAATCAAACGCTGAGCGCCTGGAGGGCTTAACCTCGCTCAGTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 90 bp TGCTCTCTGGACAGAAGAGCTGGTTCCTTCGTCCTCTTCCCCGTCTaGCTCCTGGTCTTCGTTATCAGTCCAGGAGGACACATCTTCTAC +
Preference number: 5 (lower is better)
Translates to: CSLDRRAGSFVLFPV*LLVFVISPGGHIFY
Trigger: GTAGAAGATGTGTCCTCCTGGACTGATAACGAAGACCAGGAGGCAGACGGGGAAGAGGACGAAGGAACCAGCTCTTCTGTCCAGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 90 bp CAAATCTCAATCTGTTCCTCTTCTGACTCCGAAGGATCTTCCTTGTaGAAAGACACACGGGAACGAGGAGGGGACCAGCCGTCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: QISICSSSDSEGSSL*KDTRERGGDQPSLA
Trigger: TGCCAGGGACGGCTGGTCCCCTCCTCGTTCCCGTGTGTCTTTGCACAAGGAAGATCCTTCGGAGTCAGAAGAGGAACAGATTGAGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TTTTCAGCTGGTTTGTTCTTTCGAGGCGATCGCTGGCCATTATGTTaGCTCCTTTTTCGCCAGTCGGCCTGGGTTGGGCTGTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FSAGLFFRGDRWPLC*LLFRQSAWVGLCLL
Trigger: CAGCAGACACAGCCCAACCCAGGCCGACTGGCGAAAAAGGAGGCAACATAATGGCCAGCGATCGCCTCGAAAGAACAAACCAGCTGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TTTCCTGGGCATCAGGAATTTAAAAGCGTCCCAGCATCTCTACTGTaGAGCTTACTGCACCGGGCCCCCAGCTGGACGCTGTCAGTGTAT +
Preference number: 5 (lower is better)
Translates to: FPGHQEFKSVPASLL*SLLHRAPSWTLSVY
Trigger: ATACACTGACAGCGTCCAGCTGGGGGCCCGGTGCAGTAAGCTGCACAGTAGAGATGCTGGGACGCTTTTAAATTCCTGATGCCCAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 90 bp ACTGTTGGCCTCCCAATTCTGGGGCTGCCCTCCTGGCTGTGTTGCTaGTGTACTTGCATCCTTTGTTCTGTGTTTTCAATGCCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: TVGLPILGLPSWLCC*CTCILCSVFSMPGS
Trigger: GGAGCCTGGCATTGAAAACACAGAACAAAGGATGCAAGTACAGCAGCAACACAGCCAGGAGGGCAGCCCCAGAATTGGGAGGCCAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515115.5
CDS CCA 90 bp GGACTTTCCAAGTTCCCCTTGGATTCCTCAGCACCGCACACATCTTaGGGTTCATCTGTCCCAGGCATTGCTCTCTGGACAGAAGAGCTG +
Preference number: 5 (lower is better)
Translates to: GLSKFPLDSSAPHTS*GSSVPGIALWTEEL
Trigger: CAGCTCTTCTGTCCAGAGAGCAATGCCTGGGACAGATGAACCCCAAGATGTGTGCGGTGCTGAGGAATCCAAGGGGAACTTGGAAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp GGAGTGAAATGCAGTCCCCTTCTCTGTCAAACTCTTCCTCATCACTaGCATCGTTGGCATCGTAGCAGCCTACCTTCCTCTGGCGGAGGA +
Preference number: 5 (lower is better)
Translates to: GVKCSPLLCQTLPHH*HRWHRSSLPSSGGG
Trigger: TCCTCCGCCAGAGGAAGGTAGGCTGCTACGATGCCAACGATGCCAGTGATGAGGAAGAGTTTGACAGAGAAGGGGACTGCATTTCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp CTGAAGTGTATGAGCCTGGCAAGCAGGCGGCCTTCTCACGGGGACTaGCCACCGACTCTCTCGGAGTGCTGTATTTTAATGACAGAACTT +
Preference number: 5 (lower is better)
Translates to: LKCMSLASRRPSHGD*PPTLSECCILMTEL
Trigger: AAGTTCTGTCATTAAAATACAGCACTCCGAGAGAGTCGGTGGCCAGTCCCCGTGAGAAGGCCGCCTGCTTGCCAGGCTCATACACTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp GAGCCCAGTAGCACTGTTGGCCTCCCAATTCTGGGGCTGCCCTCCTaGCTGTGTTGCTGCTGTACTTGCATCCTTTGTTCTGTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: EPSSTVGLPILGLPS*LCCCCTCILCSVFS
Trigger: AGAAAACACAGAACAAAGGATGCAAGTACAGCAGCAACACAGCCAGGAGGGCAGCCCCAGAATTGGGAGGCCAACAGTGCTACTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CCA 90 bp ATGAGCTGGTCAGGTGAGCGTGCTCTGCTGTGCTTCAGCAGCCTCTaGAATGGGACAGACTCCAAAGTTGGTTGTGCTTCACTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: MSWSGERALLCFSSL*NGTDSKVGCASLPF
Trigger: GAAGGGAAGTGAAGCACAACCAACTTTGGAGTCTGTCCCATTCCAGAGGCTGCTGAAGCACAGCAGAGCACGCTCACCTGACCAGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513852.1
CDS CCA 90 bp GAGCCCAGTAGCACTGTTGGCCTCCCAATTCTGGGGCTGCCCTCCTaGCTGTGTTGCTGCTGTACTTGCATCCTTTGTTCTGTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: EPSSTVGLPILGLPS*LCCCCTCILCSVFS
Trigger: TGAAAACACAGAACAAAGGATGCAAGTACAGCAGCAACACAGCCAGGAGGGCAGCCCCAGAATTGGGAGGCCAACAGTGCTACTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515115.5
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACAGGCAGTCACTCGATaGGAAGTCCGTCTTCCCACC +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAQAVTR*EVRLPT
Trigger: GGTGGGAAGACGGACTTCCAATCGAGTGACTGCCTG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAAGAGTCACGAGGCTGTaGGCTCTGGGTTTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEARVTRL*ALGFPG
Trigger: GCCTGGAAAACCCAGAGCCAACAGCCTCGTGACTCT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGGCAACTGTCACCTGCTaGTGGAAGAGCCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: GMANALSTHVVRAQRVGLATVTC*WKSPEA
Trigger: GGCTTCTGGGCTCTTCCACAAGCAGGTGACAGTTGC...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAGGTCGTTCCTCTTGGTaGTGGACGTCCATGCCCTTG +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAGRSSW*WTSMPL
Trigger: CAAGGGCATGGACGTCCACAACCAAGAGGAACGACC...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACCCGTCCAAAATGGCTaGAGAACTGGGCTGGCATGG +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAPVQNG*RTGLAW
Trigger: CCATGCCAGCCCAGTTCTCAAGCCATTTTGGACGGG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGGAAGCCCCGGACTaGGCTACAGGCCGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSGEAPD*ATGRSA
Trigger: TGCTGACCGGCCTGTAGCCAAGTCCGGGGCTTCCCC...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGTGCGTCTCAACAACCTaGCTGCTGCGTCACCTGGGT +
Preference number: 5 (lower is better)
Translates to: GMANALSTHVVRAQRVGLCVSTT*LLRHLG
Trigger: ACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCA...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGATGATTGAGGGAGACTaGGCCATCTGGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLMIEGD*AIWGRR
Trigger: CCTCCTGCCCCAGATGGCCAAGTCTCCCTCAATCAT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGCCAGTGAGGCGCCGTaGACTGACAGAAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLASEAP*TDRRKS
Trigger: GGATTTCCTTCTGTCAGTCAACGGCGCCTCACTGGC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp AAGAATCCTCAGCATCGCCATACATGGATGACAGAGACGGCTCCGTaGTGTCACCCAGGCCTGATAGGGAGGTGCTGTCTTCATGAAAAC +
Preference number: 5 (lower is better)
Translates to: KNPQHRHTWMTETAP*CHPGLIGRCCLHEN
Trigger: GTTTTCATGAAGACAGCACCTCCCTATCAGGCCTGGGTGACAGCACGGAGCCGTCTCTGTCATCCATGTATGGCGATGCTGAGGATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp GGCCTTGCCCTTGAGGCTGAGCCTCTTCAGCTTCGGACCACACTTTaGCTTCTGACCATTAGTCAGAAGCATTTCTGCCGGACTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GLALEAEPLQLRTTL*LLTISQKHFCRTLL
Trigger: AAGAAGAGTCCGGCAGAAATGCTTCTGACTAATGGTCAGAAGGCAAAGTGTGGTCCGAAGCTGAAGAGGCTCAGCCTCAAGGGCAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TTTTTCAACAGGAAAATGGGTCTATTGCAGTGGCTCGAGTCTGGCTaGATACTGGAGTCACCTGGGAACGTGAAACGGTGTCTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: FFNRKMGLLQWLESG*ILESPGNVKRCLAP
Trigger: GGGGGCCAGACACCGTTTCACGTTCCCAGGTGACTCCAGTATGCAGCCAGACTCGAGCCACTGCAATAGACCCATTTTCCTGTTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 90 bp CCAGGTAACTGCTTTATGAGCTGGTCAGGTGAGCGTGCTCTGCTGTaGTTCAGCAGCCTCTGGAATGGGACAGACTCCAAAGTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: PGNCFMSWSGERALL*FSSLWNGTDSKVGC
Trigger: ACAACCAACTTTGGAGTCTGTCCCATTCCAGAGGCTGCTGAAGCACAGCAGAGCACGCTCACCTGACCAGCTCATAAAGCAGTTACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513852.1
CDS CCA 90 bp TTCCATATTCGGCCAACTTCCTCCCGTGCCAGGCAGTCACTCGATTaGAAGTCCGTCTTCCCACCTTTTGAGAAGCGGCGTTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: FHIRPTSSRARQSLD*KSVFPPFEKRRLSL
Trigger: CAATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGGACTTCCAATCGAGTGACTGCCTGGCACGGGAGGAAGTTGGCCGAATATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp ATGACAAGGCGAACGGGTCCTGGAGGGCATTTACTCAAGATGGCGTaGACTTTGCTTAAAGCAGCATGGCGGACGTTGACGGAGTTCACT +
Preference number: 5 (lower is better)
Translates to: MTRRTGPGGHLLKMA*TLLKAAWRTLTEFT
Trigger: AGTGAACTCCGTCAACGTCCGCCATGCTGCTTTAAGCAAAGTCCACGCCATCTTGAGTAAATGCCCTCCAGGACCCGTTCGCCTTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS CCA 90 bp TCAGAACCGGCCACCATGAAGTCTGACAAGGGGCCAGGGACATCGTaGGCAAAGTACTGGGAGAGTTCAGATTCAGAAATAAGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SEPATMKSDKGPGTS*AKYWESSDSEIRES
Trigger: GGACTCCCTTATTTCTGAATCTGAACTCTCCCAGTACTTTGCCCACGATGTCCCTGGCCCCTTGTCAGACTTCATGGTGGCCGGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS CCA 90 bp TACTCTCCTCTAAGTCCACTGAGCTACCAAGAAGAGGTGCCGAGATaGCCTTGCTCACCAGTGTTTTCCGGGGTCGTTCCTCTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: YSPLSPLSYQEEVPR*PCSPVFSGVVPLGC
Trigger: ACAACCAAGAGGAACGACCCCGGAAAACACTGGTGAGCAAGGCCATCTCGGCACCTCTTCTTGGTAGCTCAGTGGACTTAGAGGAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGCATCTGTCCCAGGCATaGCTCTCTGGACAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLHLSQA*LSGQKS
Trigger: GCTCTTCTGTCCAGAGAGCAATGCCTGGGACAGATG...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACTCAGCTCCTGGAGCTaGGAGCGGGACACGGGCGAG +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVLSSWS*ERDTGE
Trigger: CTCGCCCGTGTCCCGCTCCAAGCTCCAGGAGCTGAG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp CTCTGTCCACTTCTGACCTCTCTAGATGGGGTCCAGCCACCTCCTTaGGAGAATCTGGGCCATTTTCTAGCTGAAAGACATGGCCGTTTC +
Preference number: 5 (lower is better)
Translates to: LCPLLTSLDGVQPPP*ENLGHFLAERHGRF
Trigger: GAAACGGCCATGTCTTTCAGCTAGAAAATGGCCCAGATTCTCTCAAGGAGGTGGCTGGACCCCATCTAGAGAGGTCAGAAGTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 90 bp CCCTTGAGGCTGAGCCTCTTCAGCTTCGGACCACACTTTGCCTTCTaGCCATTAGTCAGAAGCATTTCTGCCGGACTCTTCTTAGACAGG +
Preference number: 5 (lower is better)
Translates to: PLRLSLFSFGPHFAF*PLVRSISAGLFLDR
Trigger: CCTGTCTAAGAAGAGTCCGGCAGAAATGCTTCTGACTAATGGTCAGAAGGCAAAGTGTGGTCCGAAGCTGAAGAGGCTCAGCCTCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TTTAGTTCCGAATCAGAGCCCTTGCTACTGGTCTCTGGTGGGTTCTaGCGAGAGATGGTCAGTGTCATGATTGAGGGAGACTTGGCCATC +
Preference number: 5 (lower is better)
Translates to: FSSESEPLLLVSGGF*REMVSVMIEGDLAI
Trigger: GATGGCCAAGTCTCCCTCAATCATGACACTGACCATCTCTCGGCAGAACCCACCAGAGACCAGTAGCAAGGGCTCTGATTCGGAACTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp ATCAGGAATTTAAAAGCGTCCCAGCATCTCTACTGTGCAGCTTACTaGACCGGGCCCCCAGCTGGACGCTGTCAGTGTATGGTAAGGAAT +
Preference number: 5 (lower is better)
Translates to: IRNLKASQHLYCAAY*TGPPAGRCQCMVRN
Trigger: ATTCCTTACCATACACTGACAGCGTCCAGCTGGGGGCCCGGTGCAGTAAGCTGCACAGTAGAGATGCTGGGACGCTTTTAAATTCCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 90 bp CTATGGCTGTCTTCACAAACACACTCGCTGCCTCTACTGGCATCTTaGTCCACTGTGAGGAAATGTGTTTCCATGGTGATGCCGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LWLSSQTHSLPLLAS*STVRKCVSMVMPAL
Trigger: CAGAGCCGGCATCACCATGGAAACACATTTCCTCACAGTGGAGCAAGATGCCAGTAGAGGCAGCGAGTGTGTTTGTGAAGACAGCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 90 bp CAGCAGCAGATCATCCTCTGGTACCAAGACTTGGCAGCACCAAAATaGCCAGTCTCATGTGAGACTGTTAGAATGGACTCCAAAGCCCCC +
Preference number: 5 (lower is better)
Translates to: QQQIILWYQDLAAPK*PVSCETVRMDSKAP
Trigger: GGGGGCTTTGGAGTCCATTCTAACAGTCTCACATGAGACTGGGCATTTTGGTGCTGCCAAGTCTTGGTACCAGAGGATGATCTGCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CCA 90 bp GGAATTCTATGCTCTGTCCCTCTGTCCACTTCTGACCTCTCTAGATaGGGTCCAGCCACCTCCTTGAGAGAATCTGGGCCATTTTCTAGC +
Preference number: 5 (lower is better)
Translates to: GILCSVPLSTSDLSR*GPATSLRESGPFSS
Trigger: GCTAGAAAATGGCCCAGATTCTCTCAAGGAGGTGGCTGGACCCCATCTAGAGAGGTCAGAAGTGGACAGAGGGACAGAGCATAGAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATCGAGACTATGCTGTTaGCCTTGGCAGGAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEASRLCC*PWQEEA
Trigger: AGCTTCCTCCTGCCAAGGCAAACAGCATAGTCTCGA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACAGCCAGCGCTGCCCTaGGATTCTTCAGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEQPALP*DSSGAL
Trigger: CAAGGCCCCTGAAGAATCCAAGGGCAGCGCTGGCTG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAAAGCGGCGTTTGTCATaGCTTGTGGTCAGAGGAGCA +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAKRRLS*LVVRGA
Trigger: TGCTCCTCTGACCACAAGCAATGACAAACGCCGCTT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCCTTGGAAGAGGAAATaGAGACACGCCTCGGGTCAT +
Preference number: 5 (lower is better)
Translates to: GMANALSTHVVRAQRVGLPWKRK*RHASGH
Trigger: ATGACCCGAGGCGTGTCTCAATTTCCTCTTCCAAGG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACTCCCAATGGGAGGCTaGGAGCTCACCGACAAAAAT +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEALPMGG*ELTDKN
Trigger: ATTTTTGTCGGTGAGCTCCAAGCCTCCCATTGGGAG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp ATCGAGATGACGGATGGCCGAATGAGCCTCCAAGGAGATTCCACCTaGGTCGTGCTTAAGGAGCGGGTAGACTTCTTCACAATGTGGTAT +
Preference number: 5 (lower is better)
Translates to: IEMTDGRMSLQGDST*VVLKERVDFFTMWY
Trigger: ATACCACATTGTGAAGAAGTCTACCCGCTCCTTAAGCACGACTCAGGTGGAATCTCCTTGGAGGCTCATTCGGCCATCCGTCATCTCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000509256.1
CDS TCA 90 bp ATTGGGGCAGCCACGTGTGGAACAAATCTCAATCTGTTCCTCTTCTaGCTCCGAAGGATCTTCCTTGTGCAAAGACACACGGGAACGAGG +
Preference number: 5 (lower is better)
Translates to: IGAATCGTNLNLFLF*LRRIFLVQRHTGTR
Trigger: CCTCGTTCCCGTGTGTCTTTGCACAAGGAAGATCCTTCGGAGTCAGAAGAGGAACAGATTGAGATTTGTTCCACACGTGGCTGCCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp AAATGGGAAAATAATCTTACCAGTCATGGGTTGTTGCCCCAGCTCTaGTGCAGCTTTGGGCAGGTTCTCTGTGAGGTGGCTGGCATCCAG +
Preference number: 5 (lower is better)
Translates to: KWENNLTSHGLLPQL*CSFGQVLCEVAGIQ
Trigger: CTGGATGCCAGCCACCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAACCCATGACTGGTAAGATTATTTTCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502489.5
CDS GCA 90 bp ATGTTCAGGCTGGCAGATGAGCCTAGGGACACCTACTCGAGACTATaGTGTTTGCCTTGGCAGGAGGAAGCTAGGACCCAATTAGAACAA +
Preference number: 5 (lower is better)
Translates to: MFRLADEPRDTYSRL*CLPWQEEARTQLEQ
Trigger: TTGTTCTAATTGGGTCCTAGCTTCCTCCTGCCAAGGCAAACAGCATAGTCTCGAGTAGGTGTCCCTAGGCTCATCTGCCAGCCTGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS GCA 90 bp CTTCTGTGGTTTCTTCTGCACACGAGGGCCTGTGGTTCTGTGAAGTaGTTATGTCCGCATGAGTTTCATGCTCCTGAGAGCTCATCTCCA +
Preference number: 5 (lower is better)
Translates to: LLWFLLHTRACGSVK*LCPHEFHAPESSSP
Trigger: TGGAGATGAGCTCTCAGGAGCATGAAACTCATGCGGACATAAGCACTTCACAGAACCACAGGCCCTCGTGTGCAGAAGAAACCACAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp CATACTGGAGTCACCTGGGAACGTGAAACGGTGTCTGGCCCCCACTaGGGCATTTCTGATTTAATTAAGCTGGGAATTTCCTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: HTGVTWERETVSGPH*GISDLIKLGISWAS
Trigger: TGATGCCCAGGAAATTCCCAGCTTAATTAAATCAGAAATGCCGCAGTGGGGGCCAGACACCGTTTCACGTTCCCAGGTGACTCCAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CCA 90 bp CTTTTTCGCAGTTCGGTCACCCAGCTCCAAGGTAGGTGTTTCTCCTaGTTCAGAGCTGTTGCTACTGTTGCCATTATAAGTGGAGTGGGC +
Preference number: 5 (lower is better)
Translates to: LFRSSVTQLQGRCFS*FRAVATVAIISGVG
Trigger: GCCCACTCCACTTATAATGGCAACAGTAGCAACAGCTCTGAACCAGGAGAAACACCTACCTTGGAGCTGGGTGACCGAACTGCGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513852.1
CDS CCA 90 bp TGTTCGTCGGACTCTGGGTGTCTGTACGGACTGTGTATTCCAATTTaGGTGCGCTACTTGATCCTGACAGTTCCTTCTTCCACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: CSSDSGCLYGLCIPI*VRYLILTVPSSTSF
Trigger: GAAGCTGGTGGAAGAAGGAACTGTCAGGATCAAGTAGCGCACCCAAATTGGAATACACAGTCCGTACAGACACCCAGAGTCCGACGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGCATCATCAGAGGTCTaGCTCCTGGGGGCCAGACCC +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVASSEV*LLGARP
Trigger: GGGTCTGGCCCCCAGGAGCAAGACCTCTGATGATGC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAAGCCCATCCGATTCTTaGAGCAGCTCCATCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEASPSDS*SSSIFH
Trigger: ATGGAAGATGGAGCTGCTCAAAGAATCGGATGGGCT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAACCTCCTTCCTTCACTaGAGTGACAACGATAGCGTG +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEATSFLH*SDNDSV
Trigger: CACGCTATCGTTGTCACTCAAGTGAAGGAAGGAGGT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTTCCCCGCGGCTCAGGTaGCTCTCCATCTTGGCCACT +
Preference number: 5 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSSPRLR*LSILAT
Trigger: AGTGGCCAAGATGGAGAGCAACCTGAGCCGCGGGGA...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGCAGCATGGCGGACGTaGACGGAGTTCACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQAAWRT*TEFTSR
Trigger: CCTGGAAGTGAACTCCGTCAACGTCCGCCATGCTGC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTGGACGTCCATGCCCTaGGAAGAGGAAATTGAGACA +
Preference number: 5 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLWTSMP*EEEIET
Trigger: TGTCTCAATTTCCTCTTCCAAGGGCATGGACGTCCA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGACCTGGCCTTGCACTaGGTGACCCTGGGCGATGCA +
Preference number: 5 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSDLALH*VTLGDA
Trigger: TGCATCGCCCAGGGTCACCAAGTGCAAGGCCAGGTC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAACTGGAGACCTGGCCTaGCACTTGGTGACCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVTGDLA*HLVTLG
Trigger: GCCCAGGGTCACCAAGTGCAAGGCCAGGTCTCCAGT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCATGCTTCTTTGGTGTaGTCAGTGGATGGCAGCATG +
Preference number: 5 (lower is better)
Translates to: GMANALSTHVVRAQRVGLHASLV*SVDGSM
Trigger: CATGCTGCCATCCACTGACAACACCAAAGAAGCATG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGGGACTCGAGGGTGGATaGGGGCAGCCACGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGGLEGG*GQPRVE
Trigger: TTCCACACGTGGCTGCCCCAATCCACCCTCGAGTCC...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGGCAGGGGCCTCAGAGTaGACTTTGGCCTTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQAGASE*TLALPL
Trigger: CAAGGGCAAGGCCAAAGTCAACTCTGAGGCCCCTGC...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGCGATTTTCAGCTGGTTaGTTCTTTCGAGGCGATCGC +
Preference number: 5 (lower is better)
Translates to: GMANALSTHVVRAQRVGLRFSAG*FFRGDR
Trigger: GCGATCGCCTCGAAAGAACAAACCAGCTGAAAATCG...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAACCACGAGGGCATCTTaGTGCAGCTGTGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSTTRAS*CSCAWC
Trigger: GCACCAGGCACAGCTGCACAAAGATGCCCTCGTGGT...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp AAGCCATTTACCATGTTGGGGGAGCTGAGAATGATGGGCGGACTGTaGAAATGCCTGGCTACTTTAGACAGCGGACTGTTTTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: KPFTMLGELRMMGGL*KCLATLDSGLFSMA
Trigger: AGCCATGGAAAACAGTCCGCTGTCTAAAGTAGCCAGGCATTTTCACAGTCCGCCCATCATTCTCAGCTCCCCCAACATGGTAAATGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp AAAGTCCACCAAGTGGTCGAGACAGTTTTGGGGCAAAGGCAAGCATaGCAAGATCTGATGACCAAGGTGTTTCCCTGTATTGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: KVHQVVETVLGQRQA*QDLMTKVFPCIEEG
Trigger: GCCCTCCTCAATACAGGGAAACACCTTGGTCATCAGATCTTGTCATGCTTGCCTTTGCCCCAAAACTGTCTCGACCACTTGGTGGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 90 bp CTGGAGTGCTCAATGAGGGAAGGAAGGAAGTGTCTAACAAGTCCCTaGCAGGTTCATTTCACAGCAGGACCCATGCAAATGACACAGGAA +
Preference number: 5 (lower is better)
Translates to: LECSMREGRKCLTSP*QVHFTAGPMQMTQE
Trigger: TTCCTGTGTCATTTGCATGGGTCCTGCTGTGAAATGAACCTGGCAGGGACTTGTTAGACACTTCCTTCCTTCCCTCATTGAGCACTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS GCA 90 bp TTCCCAAAGGACCAAGTGATTTCTTTAGTTCCGAATCAGAGCCCTTaGTACTGGTCTCTGGTGGGTTCTGCCGAGAGATGGTCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: FPKDQVISLVPNQSP*YWSLVGSAERWSVS
Trigger: TGACACTGACCATCTCTCGGCAGAACCCACCAGAGACCAGTAGCAAGGGCTCTGATTCGGAACTAAAGAAATCACTTGGTCCTTTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp TGTTTGCCTTGGCAGGAGGAAGCTAGGACCCAATTAGAACAACTGTaGAACAATGGCACTGGAGTGCTCAATGAGGGAAGGAAGGAAGTG +
Preference number: 5 (lower is better)
Translates to: CLPWQEEARTQLEQL*NNGTGVLNEGRKEV
Trigger: CACTTCCTTCCTTCCCTCATTGAGCACTCCAGTGCCATTGTTCCACAGTTGTTCTAATTGGGTCCTAGCTTCCTCCTGCCAAGGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS CCA 90 bp GCAGATGAGCCTAGGGACACCTACTCGAGACTATGCTGTTTGCCTTaGCAGGAGGAAGCTAGGACCCAATTAGAACAACTGTGGAACAAT +
Preference number: 5 (lower is better)
Translates to: ADEPRDTYSRLCCLP*QEEARTQLEQLWNN
Trigger: ATTGTTCCACAGTTGTTCTAATTGGGTCCTAGCTTCCTCCTGCCAAGGCAAACAGCATAGTCTCGAGTAGGTGTCCCTAGGCTCATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS CCA 90 bp AGTCCGTCTTCCCACCTTTTGAGAAGCGGCGTTTGTCATTGCTTGTaGTCAGAGGAGCATCTGTCTTTGGAATTCTATGCTCTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: SPSSHLLRSGVCHCL*SEEHLSLEFYALSL
Trigger: GAGGGACAGAGCATAGAATTCCAAAGACAGATGCTCCTCTGACCACAAGCAATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp TGTGACCCTGTTAGGACTACTTTCCAGTTTACACATGGAGCAGTGTaGGGGAGACTCGGAATCAGGGTAGCAAGCAAGATCTGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: CDPVRTTFQFTHGAV*GRLGIRVASKIWWK
Trigger: TTTCCACCAGATCTTGCTTGCTACCCTGATTCCGAGTCTCCCCCACACTGCTCCATGTGTAAACTGGAAAGTAGTCCTAACAGGGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS CCA 90 bp ATGATTTTTCAACAGGAAAATGGGTCTATTGCAGTGGCTCGAGTCTaGCTGCATACTGGAGTCACCTGGGAACGTGAAACGGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: MIFQQENGSIAVARV*LHTGVTWERETVSG
Trigger: GCCAGACACCGTTTCACGTTCCCAGGTGACTCCAGTATGCAGCCAGACTCGAGCCACTGCAATAGACCCATTTTCCTGTTGAAAAATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAGAGGAGCATCTGTCTTaGGAATTCTATGCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAEEHLS*EFYALS
Trigger: GGACAGAGCATAGAATTCCAAAGACAGATGCTCCTC...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGTTTGAGAAGCGGCGTTaGTCATTGCTTGTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLFEKRR*SLLVVR
Trigger: TCTGACCACAAGCAATGACAAACGCCGCTTCTCAAA...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGCTCCCCCACTGGTATaGAAGTTCGGGGAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVAPPLV*KFGEAD
Trigger: ATCCGCCTCCCCGAACTTCAATACCAGTGGGGGAGC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTATGACGATCCTGTCCTaGGGCCCAGGGGTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSMTILS*GPGVFR
Trigger: TCGGAAGACCCCTGGGCCCAAGGACAGGATCGTCAT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGGTGCCGAGATGGCCTaGCTCACCAGTGTTTTCCGG +
Preference number: 5 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSGAEMA*LTSVFR
Trigger: CCGGAAAACACTGGTGAGCAAGGCCATCTCGGCACC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGACTTCCAGGGCTCCCCTaGGGGGCCTCTGCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGLPGLP*GASAES
Trigger: GGACTCTGCAGAGGCCCCCAAGGGGAGCCCTGGAAG...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGTCAGCCTCGGATCTCTaGCAGTGGGGGCTTACCCTG +
Preference number: 5 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGSASDL*QWGLTL
Trigger: CAGGGTAAGCCCCCACTGCAAGAGATCCGAGGCTGA...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATGTTCCTTCTCGGTTTaGCTCCTCAAATGTGTGCCT +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEACSFSV*LLKCVP
Trigger: AGGCACACATTTGAGGAGCAAAACCGAGAAGGAACA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTCGGGGACAACACTGCTaGTCACAGGGACCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSRGQHC*SQGPGC
Trigger: ACAGCCAGGTCCCTGTGACAAGCAGTGTTGTCCCCG...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGTGCCGGCTTCGCTTaGGTTTTCGCTGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSGAGFA*VFAAGT
Trigger: AGTTCCTGCAGCGAAAACCAAAGCGAAGCCGGCACC...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp TCCCCGTCTGTCGCTTTCAGCTGGCTTGTTACCACATACAGTCTCTaGCACTGCTTCAGCAGAAATCTCCACGATTTTCAGCTGGTTTGT +
Preference number: 5 (lower is better)
Translates to: SPSVAFSWLVTTYSL*HCFSRNLHDFQLVC
Trigger: ACAAACCAGCTGAAAATCGTGGAGATTTCTGCTGAAGCAGTGTCAGAGACTGTATGTGGTAACAAGCCAGCTGAAAGCGACAGACGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp TTGTCATTGCTTGTGGTCAGAGGAGCATCTGTCTTTGGAATTCTATaGTCTGTCCCTCTGTCCACTTCTGACCTCTCTAGATGGGGTCCA +
Preference number: 5 (lower is better)
Translates to: LSLLVVRGASVFGIL*SVPLSTSDLSRWGP
Trigger: TGGACCCCATCTAGAGAGGTCAGAAGTGGACAGAGGGACAGAGCATAGAATTCCAAAGACAGATGCTCCTCTGACCACAAGCAATGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 90 bp ACAGTCTCTGACACTGCTTCAGCAGAAATCTCCACGATTTTCAGCTaGTTTGTTCTTTCGAGGCGATCGCTGGCCATTATGTTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: TVSDTASAEISTIFS*FVLSRRSLAIMLPP
Trigger: AGGAGGCAACATAATGGCCAGCGATCGCCTCGAAAGAACAAACCAGCTGAAAATCGTGGAGATTTCTGCTGAAGCAGTGTCAGAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp CGTCTGGTGACTTTGATTTTGTCTGTGACTAGGCAGCTCGTCTCCTaGACTGAAATGATATCCCCTTCATCTGTGGCTGGAAGATTCCTC +
Preference number: 5 (lower is better)
Translates to: RLVTLILSVTRQLVS*TEMISPSSVAGRFL
Trigger: GAGGAATCTTCCAGCCACAGATGAAGGGGATATCATTTCAGTCCAGGAGACGAGCTGCCTAGTCACAGACAAAATCAAAGTCACCAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp CTGAAGTCACACTTGGGGACTCCAAATTTGATTTTCTGCCAACCCTaGCTGCTAATGGCAGCAGCAGATCATCCTCTGGTACCAAGACTT +
Preference number: 5 (lower is better)
Translates to: LKSHLGTPNLIFCQP*LLMAAADHPLVPRL
Trigger: AAGTCTTGGTACCAGAGGATGATCTGCTGCTGCCATTAGCAGCCAGGGTTGGCAGAAAATCAAATTTGGAGTCCCCAAGTGTGACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS-3UTR CAA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACCAGGATTGGGTATGTaGGGAGAGCTGGCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSPGLGM*GELARR
Trigger: CCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGGTGTCCCCCAGCTCCTaGGTGAGGTACACAGTACAG +
Preference number: 5 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGVSPSS*VRYTVQ
Trigger: CTGTACTGTGTACCTCACCAAGGAGCTGGGGGACAC...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGACTGTGTATTCCAATTaGGGTGCGCTACTTGATCCT +
Preference number: 5 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLTVYSN*GALLDP
Trigger: AGGATCAAGTAGCGCACCCAAATTGGAATACACAGT...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGGGAAGACGGAGACCTaGCTGCAGAAGCATCCAGCT +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVGKTET*LQKHPA
Trigger: AGCTGGATGCTTCTGCAGCAAGGTCTCCGTCTTCCC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGAGTTGACTTTGGCCTaGCCCTTGAGGCTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVELTLA*PLRLSL
Trigger: GAGGCTCAGCCTCAAGGGCAAGGCCAAAGTCAACTC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGTCCGAATCAGAGCCCTaGCTACTGGTCTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGSESEP*LLVSGG
Trigger: CCCACCAGAGACCAGTAGCAAGGGCTCTGATTCGGA...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGTCCTCGCTGCAGAGCTaGTCAAGGTCAGGCATGCTC +
Preference number: 5 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGSSLQS*SRSGML
Trigger: GAGCATGCCTGACCTTGACAAGCTCTGCAGCGAGGA...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTATCTCCAGCTCAGTTTaGAAGAGCACGGCGCTCGGC +
Preference number: 5 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSISSSV*KSTALG
Trigger: GCCGAGCGCCGTGCTCTTCAAAACTGAGCTGGAGAT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAGGCAAAAGGAGGAAATaGCAAAGCGGGAAAACGAAA +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAGKRRK*QSGKTK
Trigger: TTTCGTTTTCCCGCTTTGCAATTTCCTCCTTTTGCC...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTTTGAGGAGACCATTCCATTaGCTCCACATTGCACAAGAA +
Preference number: 5 (lower is better)
Translates to: GMANALSTHVVRAQRVGLRRPFH*LHIAQE
Trigger: TTCTTGTGCAATGTGGAGCAAATGGAATGGTCTCCT...CAAACCAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCAAATTTCAACTGTTTGTaGGCGAGGGAAACCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEANFNCL*ARETFW
Trigger: CCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATT...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp GTGGAGTTTAGCCCATTTATAAATGCAGTCTGCGGGGAAAGGGTATaGAGGGGAGCTGTGACCCTGTTAGGACTACTTTCCAGTTTACAC +
Preference number: 5 (lower is better)
Translates to: VEFSPFINAVCGERV*RGAVTLLGLLSSLH
Trigger: GTGTAAACTGGAAAGTAGTCCTAACAGGGTCACAGCTCCCCTTCATACCCTTTCCCCGCAGACTGCATTTATAAATGGGCTAAACTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS TCA 90 bp TGTGAGGATGAAGTGGTTTCCTTTGACAGTTTACAAGGATCCCACTaGAAGTCCACCAAGTGGTCGAGACAGTTTTGGGGCAAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: CEDEVVSFDSLQGSH*KSTKWSRQFWGKGK
Trigger: CTTGCCTTTGCCCCAAAACTGTCTCGACCACTTGGTGGACTTTCAGTGGGATCCTTGTAAACTGTCAAAGGAAACCACTTCATCCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 90 bp ATTGGAAGTCCGTCTTCCCACCTTTTGAGAAGCGGCGTTTGTCATTaGTTGTGGTCAGAGGAGCATCTGTCTTTGGAATTCTATGCTCTG +
Preference number: 5 (lower is better)
Translates to: IGSPSSHLLRSGVCH*LWSEEHLSLEFYAL
Trigger: CAGAGCATAGAATTCCAAAGACAGATGCTCCTCTGACCACAAGCAATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGGACTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 90 bp GGTTGTCACCTTTCAAGACAACCTTTTCTCTGGAAACGTTCGAAATaGCCAATCATGGGAGGAAGGTTGACTCGTTACAGCACATCCGTG +
Preference number: 5 (lower is better)
Translates to: GCHLSRQPFLWKRSK*PIMGGRLTRYSTSV
Trigger: CACGGATGTGCTGTAACGAGTCAACCTTCCTCCCATGATTGGGCATTTCGAACGTTTCCAGAGAAAAGGTTGTCTTGAAAGGTGACAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503961.1
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCACATCTCCTCCTTCCATaGAATGTGCCTAAAAGCATT +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAHLLLP*NVPKSI
Trigger: AATGCTTTTAGGCACATTCAATGGAAGGAGGAGATG...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTGGTCCAGCCACCTCCTaGAGAGAATCTGGGCCATTT +
Preference number: 5 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSGPATS*RESGPF
Trigger: AAATGGCCCAGATTCTCTCAAGGAGGTGGCTGGACC...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGGCGTTTGTCATTGCTaGTGGTCAGAGGAGCATCTG +
Preference number: 5 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEGVCHC*WSEEHL
Trigger: CAGATGCTCCTCTGACCACAAGCAATGACAAACGCC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACTTTCCAAGTTCCCCTaGGATTCCTCAGCACCGCAC +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVLSKFP*DSSAPH
Trigger: GTGCGGTGCTGAGGAATCCAAGGGGAACTTGGAAAG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATTGAGCTTGATTTTATaGCTGCCCTGTTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEALSLIL*LPCLGL
Trigger: AAGTCCCAAACAGGGCAGCAATAAAATCAAGCTCAA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATTTGGGAAGATGGTCTaGACAAAAATCCCCATCTGT +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEAFGKMV*TKIPIC
Trigger: ACAGATGGGGATTTTTGTCAAGACCATCTTCCCAAA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGGTTCACTTCCAGGATTaGATCCCCGCGGCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGVHFQD*IPAAQV
Trigger: AACCTGAGCCGCGGGGATCAAATCCTGGAAGTGAAC...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTACAGGCCGGTCAGCATaGGCCAGGTTCTCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSTGRSA*ARFSKD
Trigger: GTCTTTTGAGAACCTGGCCAATGCTGACCGGCCTGT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTTCAGGGCTCAACGGGTaGGTTTGTGCCACTGAAGAC +
Preference number: 5 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSSGLNG*VCATED
Trigger: GTCTTCAGTGGCACAAACCAACCCGTTGAGCCCTGA...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGCACTCTCCACTCATGTaGTCAGGGCTCAACGGGTTG +
Preference number: 5 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGHSPLM*SGLNGL
Trigger: CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTG...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp GGACCATGGAGGCATCTGGACAAGAAGTGTTTCTCATTTGTTAAATaGAATCGGAGCCATTTTCAGCAAGGACTACAAACAGCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: GPWRHLDKKCFSFVK*NRSHFQQGLQTAQA
Trigger: GGCCTGAGCTGTTTGTAGTCCTTGCTGAAAATGGCTCCGATTCCATTTAACAAATGAGAAACACTTCTTGTCCAGATGCCTCCATGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS-3UTR CAA 90 bp AGTTCCCTGATCACCAGGATTGGGTATGTTGGGAGAGCTGGCAAGAAGGAAGCATGTGTAAGCACAAGCTaGGAGATTTTTATAGTCCGT +
Preference number: 5 (lower is better)
Translates to: SSLITRIGYVGRAGKKEACVSTS*EIFIVR
Trigger: ACGGACTATAAAAATCTCCAAGCTTGTGCTTACACA...TGCTTCCTTCTTGCCAGCTCTCCCAACATACCCAATCCTGGTGATCAGGGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTGGCCATCATCAGCTTaGCCTGTGTTCATGTTCAGG +
Preference number: 5 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQWPSSA*PVFMFR
Trigger: CCTGAACATGAACACAGGCAAAGCTGATGATGGCCA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACCGTCTTCCCACCTTTaGAGAAGCGGCGTTTGTCAT +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVPSSHL*RSGVCH
Trigger: ATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCATTATTGCTGCCCTGTTaGGGACTTTCCAAGTTCCCC +
Preference number: 5 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSLLLPC*GLSKFP
Trigger: GGGGAACTTGGAAAGTCCCAAACAGGGCAGCAATAA...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAAAGATGGCGTGGACTTaGCTTAAAGCAGCATGGCGG +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVKMAWT*LKAAWR
Trigger: CCGCCATGCTGCTTTAAGCAAAGTCCACGCCATCTT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGATCCGGGGAGACTGGCTaGTCTGGCAACTGTCACCTG +
Preference number: 5 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGSGETG*SGNCHL
Trigger: CAGGTGACAGTTGCCAGACAAGCCAGTCTCCCCGGA...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGAGATCGCATGGATCATaGGCTCTGCCAGTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGRSHGS*ALPVRF
Trigger: GAACCTGACTGGCAGAGCCAATGATCCATGCGATCT...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTTGGCCACATGCTTCTTaGGTGTTGTCAGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSWPHAS*VLSVDG
Trigger: GCCATCCACTGACAACACCAAAGAAGCATGTGGCCA...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGAAGCATCCAGCTCCTaGATGAAGCTGTCAATGTCC +
Preference number: 5 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEEASSS*MKLSMS
Trigger: GGACATTGACAGCTTCATCAAGGAGCTGGATGCTTC...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATCGCTGGCCATTATGTaGCCTCCTTTTTCGCCAGTC +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVSLAIM*PPFSPV
Trigger: GACTGGCGAAAAAGGAGGCAACATAATGGCCAGCGA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp CTGAAGGAGGACAGACTGGCAGCTGCATTAATGCTTGTTTCGTATTaGTTCAGGGTTTCGTCATCTAGCAGGTCATGTTCCAAGCCATTT +
Preference number: 5 (lower is better)
Translates to: LKEDRLAAALMLVSY*FRVSSSSRSCSKPF
Trigger: AAATGGCTTGGAACATGACCTGCTAGATGACGAAACCCTGAATCAATACGAAACAAGCATTAATGCAGCTGCCAGTCTGTCCTCCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp TTTTGGCTCCACATCTGTCCCTCCTGCCACACTGAATCCCAGACCTaGGCCTTCTTTTCTATTCAAGACTATGAAGCAAACATCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FWLHICPSCHTESQT*AFFSIQDYEANIFF
Trigger: GAAGAAGATGTTTGCTTCATAGTCTTGAATAGAAAAGAAGGCTCAGGTCTGGGATTCAGTGTGGCAGGAGGGACAGATGTGGAGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 90 bp GTCTGTAACTTAAAAGGTCTTCATCTGAGGGAGACGAGGTTACACTaGGGCAGCCTTTGGTTGTCACCTTTCAAGACAACCTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: VCNLKGLHLRETRLH*GSLWLSPFKTTFSL
Trigger: CAGAGAAAAGGTTGTCTTGAAAGGTGACAACCAAAGGCTGCCTCAGTGTAACCTCGTCTCCCTCAGATGAAGACCTTTTAAGTTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503961.1
CDS GCA 90 bp TTAAGATTAACAAATGGGAAAATAATCTTACCAGTCATGGGTTGTTaGCCCAGCTCTGATGCAGCTTTGGGCAGGTTCTCTGTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LRLTNGKIILPVMGC*PSSDAALGRFSVRW
Trigger: CCACCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAACCCATGACTGGTAAGATTATTTTCCCATTTGTTAATCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502489.5
CDS CCA 90 bp CGGAATCAGGGTAGCAAGCAAGATCTGGTGGAAACTCGGGCAGGCTaGTTAATGTGGAATGAAGGACATGATGATATCAAGAAAAAGTTG +
Preference number: 5 (lower is better)
Translates to: RNQGSKQDLVETRAG*LMWNEGHDDIKKKL
Trigger: CAACTTTTTCTTGATATCATCATGTCCTTCATTCCACATTAACCAGCCTGCCCGAGTTTCCACCAGATCTTGCTTGCTACCCTGATTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS CCA 90 bp AAGCTAGCATTGTCTCCTTTGGACATAAAGGCCAGTCCATTGTCGTaGTTTAAAGAAGGCCACTCCACAGGGTCTGAAGGACATTTACTA +
Preference number: 5 (lower is better)
Translates to: KLALSPLDIKASPLS*FKEGHSTGSEGHLL
Trigger: TAGTAAATGTCCTTCAGACCCTGTGGAGTGGCCTTCTTTAAACCACGACAATGGACTGGCCTTTATGTCCAAAGGAGACAATGCTAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS-3UTR CAA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGATCTGCGGAGTTTTCCTaGCTGGCCACCACAAGCTGC +
Preference number: 5 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGSAEFS*LATTSC
Trigger: GCAGCTTGTGGTGGCCAGCAAGGAAAACTCCGCAGA...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAAGCACCGCACACATCTaGGGGTTCATCTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGSTAHI*GFICPR
Trigger: CCTGGGACAGATGAACCCCAAGATGTGTGCGGTGCT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGATTTGGGTGCGCTACTaGATCCTGACAGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQIWVRY*ILTVPS
Trigger: AGAAGGAACTGTCAGGATCAAGTAGCGCACCCAAAT...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTCCGAAGGATCTTCCTaGTGCAAAGACACACGGGAA +
Preference number: 5 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSSEGSS*CKDTRE
Trigger: TTCCCGTGTGTCTTTGCACAAGGAAGATCCTTCGGA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAAAGCCATTTACCATGTaGGGGGAGCTGAGAATGATG +
Preference number: 5 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEKPFTM*GELRMM
Trigger: CATCATTCTCAGCTCCCCCAACATGGTAAATGGCTT...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAGCCTCAGAGTTGACTTaGGCCTTGCCCTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGASELT*ALPLRL
Trigger: CAGCCTCAAGGGCAAGGCCAAAGTCAACTCTGAGGC...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGTGAGGATGGATGACTaGTGGATGATTCTGCGACCT +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVVRMDD*WMILRP
Trigger: AGGTCGCAGAATCATCCACAAGTCATCCATCCTCAC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTGGCGTACCGAGGACTaGTTCCTCTTAACAGGAGAA +
Preference number: 5 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSWRTED*FLLTGE
Trigger: TTCTCCTGTTAAGAGGAACAAGTCCTCGGTACGCCA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCAGGGCTCAACGGGTTGGTACCATATTTTCCTTaGTATTGCCAGTTGATGAGA +
Preference number: 5 (lower is better)
Translates to: TQVWQMHSPLMLSGLNGLVPYFP*YCQLMR
Trigger: TCTCATCAACTGGCAATACAAAGGAAAATATGGTAC...CAACCCGTTGAGCCCTGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGCCAGAGGTCTACCCTaGTACTCCAGATATGAGGAT +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVARGLP*YSRYED
Trigger: ATCCTCATATCTGGAGTACAAGGGTAGACCTCTGGC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp CTTCGGACCACACTTTGCCTTCTGACCATTAGTCAGAAGCATTTCTaGCGGACTCTTCTTAGACAGGTCCTTATTTTCCAGGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: LRTTLCLLTISQKHF*RTLLRQVLIFQVCF
Trigger: AAAACAAACCTGGAAAATAAGGACCTGTCTAAGAAGAGTCCGGCAGAAATGCTTCTGACTAATGGTCAGAAGGCAAAGTGTGGTCCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp AATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAGTATCTAGGCGACTCTTGAGCTaGATTTTATTGCTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: NLGVTAIDPSCRLFKEVSRRLLS*ILLLPC
Trigger: ACAGGGCAGCAATAAAATCAAGCTCAAGAGTCGCCT...AGATACTTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCACCTGAAAGGCGACTCTaGAGCTTGATTTTATTGCTG +
Preference number: 5 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSPERRL*SLILLL
Trigger: CAGCAATAAAATCAAGCTCAAGAGTCGCCTTTCAGG...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAACCCTTGCCTTTTTCTTaGTACAACCCAATGATCGAG +
Preference number: 5 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEPLPFS*YNPMIE
Trigger: CTCGATCATTGGGTTGTACAAAGAAAAAGGCAAGGG...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp GAAGGGTGTGTCACATCTTGTATCCCCATCAGTAAACATAACATAAAGGTAGGGTGGGGCTCACCAACTTaGTGCGTACCGTTAAAACAA +
Preference number: 5 (lower is better)
Translates to: EGCVTSCIPISKHNIKVGWGSPT*CVPLKQ
Trigger: TTGTTTTAACGGTACGCACAAAGTTGGTGAGCCCCA...CCCTACCTTTATGTTATGTTTACTGATGGGGATACAAGATGTGACACACCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGACTCTTGGCTCTTTGTaGAGTGTTACTTCCATGACG +
Preference number: 5 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQTLGSL*SVTSMT
Trigger: CGTCATGGAAGTAACACTCAACAAAGAGCCAAGAGT...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAAGGTTGCTCTCCATCTaGGCCACTGATCCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGRLLSI*ATDPGA
Trigger: TGCTCCAGGATCAGTGGCCAAGATGGAGAGCAACCT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAAGCTCTGATGCAGCTTaGGGCAGGTTCTCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGSSDAA*GRFSVR
Trigger: CCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ATCTTAGTGTCATGCACACAGGTATGGCAAATGCACTCTCCACTCATGTTGTCATTTAATGACAGAACTTaGGCTGAGGCAGGACAGATG +
Preference number: 5 (lower is better)
Translates to: ILVSCTQVWQMHSPLMLSFNDRT*AEAGQM
Trigger: CATCTGTCCTGCCTCAGCCAAAGTTCTGTCATTAAA...TGACAACATGAGTGGAGAGTGCATTTGCCATACCTGTGTGCATGACACTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACAAGTCATCCAGGTCTaGACTTTCAGAGATGTGGAG +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVQVIQV*TFRDVE
Trigger: CTCCACATCTCTGAAAGTCAAGACCTGGATGACTTG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTCTGGTGACTTTGATTTaGTCTGTGACTAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSLVTLI*SVTRQL
Trigger: GAGCTGCCTAGTCACAGACAAAATCAAAGTCACCAG...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAAGGTTCTCAAAAGACTaGATCCGCTGCTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVRFSKD*IRCFTE
Trigger: CTCTGTGAAGCAGCGGATCAAGTCTTTTGAGAACCT...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAAAGCCAGGGTCATCGTaGGGGTGGGAATTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGKPGSS*GWEFPK
Trigger: CTTTGGGAATTCCCACCCCAACGATGACCCTGGCTT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTGCTCCCTCTAAGCAGTGAAGCTCATGGCTATTTAATACAGCTTATCAGAAGTTCAGCCGCACCACCTTaGTACACTCTTTTAATGACC +
Preference number: 5 (lower is better)
Translates to: LLPLSSEAHGYLIQLIRSSAAPP*YTLLMT
Trigger: GGTCATTAAAAGAGTGTACAAAGGTGGTGCGGCTGA...ACTTCTGATAAGCTGTATTAAATAGCCATGAGCTTCACTGCTTAGAGGGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAATTCTATTATTCCAGCTaGTTCAGCCGCACCACCTTT +
Preference number: 5 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKEFYYSS*FSRTTF
Trigger: AAAGGTGGTGCGGCTGAACAAGCTGGAATAATAGAA...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 90 bp ACAGGTCCTTCTGGGACAGACTTCATAATATTCCAGGCATCAAAGTaGATGAGCCCAACCAGAGGTTTCCCATTAATAGCAAGAATTTCA +
Preference number: 5 (lower is better)
Translates to: TGPSGTDFIIFQASK*MSPTRGFPLIARIS
Trigger: TGAAATTCTTGCTATTAATGGGAAACCTCTGGTTGGGCTCATGCACTTTGATGCCTGGAATATTATGAAGTCTGTCCCAGAAGGACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397559.3
ENST00000438447.2
ENST00000510285.1
ENST00000513490.1
ENST00000515115.5
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACTAAAGCCAAGGCCCTaGCCTTTTTCTTTGTACAAC +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVLKPRP*PFSLYN
Trigger: GTTGTACAAAGAAAAAGGCAAGGGCCTTGGCTTTAG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTACCAACTCTTGGCTCTTaGTTGAGTGTTACTTCCATG +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVPTLGS*LSVTSM
Trigger: CATGGAAGTAACACTCAACAAAGAGCCAAGAGTTGG...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTATGTCGTCTGGTGACTTaGATTTTGTCTGTGACTAGG +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVCRLVT*ILSVTR
Trigger: CCTAGTCACAGACAAAATCAAAGTCACCAGACGACA...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGTTAAATTTCAACTGTTaGTTGGCGAGGGAAACCTTC +
Preference number: 5 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQLNFNC*LARETF
Trigger: GAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAA...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp TCCATGAATCTGGGGGTCACAGCCATAGACCCAAGCTGTAGGTTATTTAAAGAAAGAAGTCACTCTGATTaGCTAAAGAAAGAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: SMNLGVTAIDPSCRLFKERSHSD*LKKEEN
Trigger: GTTCTCTTCTTTCTTTAGCAAATCAGAGTGACTTCT...TTCTTTAAATAACCTACAGCTTGGGTCTATGGCTGTGACCCCCAGATTCATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CTTCCCTTAAATTTCAACTGTTTGTTGGCGAGGGAAACCTTCTGGCAAGATGTAGGTATGAATGGCTTCTaGAAATGTCAAGCCCTTTAT +
Preference number: 5 (lower is better)
Translates to: LPLNFNCLLARETFWQDVGMNGF*KCQALY
Trigger: ATAAAGGGCTTGACATTTCAAGAAGCCATTCATACC...TACATCTTGCCAGAAGGTTTCCCTCGCCAACAAACAGTTGAAATTTAAGGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGATCGCTTTCAGCTGGCTaGTTACCACATACAGTCTCT +
Preference number: 5 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGSLSAG*LPHTVS
Trigger: AGAGACTGTATGTGGTAACAAGCCAGCTGAAAGCGA...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS-3UTR CAA 90 bp CAAGATGTAGTAGCAGTGGCTGATGACTTTAGCATAGTGTATGTGGTAAGCCAGCTTCATGGTATATTCTaGCAACTACGGTTTACTTGT +
Preference number: 5 (lower is better)
Translates to: QDVVAVADDFSIVYVVSQLHGIF*QLRFTC
Trigger: ACAAGTAAACCGTAGTTGCAAGAATATACCATGAAG...CTGGCTTACCACATACACTATGCTAAAGTCATCAGCCACTGCTACTACATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 90 bp GTCAGCACACGGCAAGGTCAGAGATTACTCTCATTTGTTCTATTGTaGTATCTGGCAGAAAAATACACTCAGACTTTGAAAATCTTAGAT +
Preference number: 5 (lower is better)
Translates to: VSTRQGQRLLSFVLL*YLAEKYTQTLKILD
Trigger: ATCTAAGATTTTCAAAGTCTGAGTGTATTTTTCTGCCAGATACCACAATAGAACAAATGAGAGTAATCTCTGACCTTGCCGTGTGCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509256.1
CDS-3UTR CAA 90 bp ACAAAGTTATGGTGCCAATTAAGTCAACCATCAAATTCAATGAGATGTGTGGGAAATGCTTGTTTCGTATaGATTCAGGGTTTCGTCATC +
Preference number: 5 (lower is better)
Translates to: TKLWCQLSQPSNSMRCVGNACFV*IQGFVI
Trigger: GATGACGAAACCCTGAATCAATACGAAACAAGCATT...TCCCACACATCTCATTGAATTTGATGGTTGACTTAATTGGCACCATAACTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp TCTGTTCCCTGCCACGGACATGCCGTTCCTAGACGCTaGCGGACTCACCGGCCCGGAGTCAGCACGGGGCGC +
Preference number: 6 (lower is better)
Translates to: SVPCHGHAVPRR*RTHRPGVSTGR
Trigger: GCGCCCCGTGCTGACTCCGGGCCGGTGAGTCCGGCAGCGTCTAGGAACGGCATGTCCGTGGCAGGGAACAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp CGTCACCTGGGTGGCCCAGGCTCCCGGAAACAATGCTaGCGGAAGACCGCCTCCCAATGGGAGGCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: RHLGGPGSRKQC*RKTASQWEAWS
Trigger: GCTCCAAGCCTCCCATTGGGAGGCGGTCTTCCGGCAGCATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp CTGCGTCACCTGGGTGGCCCAGGCTCCCGGAAACAATaGTGCCGGAAGACCGCCTCCCAATGGGAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: LRHLGGPGSRKQ*CRKTASQWEAW
Trigger: CCAAGCCTCCCATTGGGAGGCGGTCTTCCGGCAGCATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp CTGGGCTGGCATGGAGTAGGTCCTGGTCGCTGGCCTTaGGGTGAAGTAGAGATGGTCCTCCCCCGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: LGWHGVGPGRWP*GEVEMVLPRGA
Trigger: GGCCCCTCGGGGGAGGACCATCTCTACTTCACCCCAAGGCCAGCGACCAGGACCTACTCCATGCCAGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp GGTCAGGCATGCTCAAGGCTCTCAGCTCCTGGAGCTTaGAGCGGGACACGGGCGAGGGCTGCGTGTGGCGTA +
Preference number: 6 (lower is better)
Translates to: GQACSRLSAPGA*SGTRARAACGV
Trigger: TACGCCACACGCAGCCCTCGCCCGTGTCCCGCTCCAAGCTCCAGGAGCTGAGAGCCTTGAGCATGCCTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp CTGCCCTCATGGGGGAGCCTGACTGGAGACCTGGCCTaGCACTTGGTGACCCTGGGCGATGCAGGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LPSWGSLTGDLA*HLVTLGDAGWL
Trigger: CAGCCAGCCTGCATCGCCCAGGGTCACCAAGTGCAAGGCCAGGTCTCCAGTCAGGCTCCCCCATGAGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp AGGTCAGGCATGCTCAAGGCTCTCAGCTCCTGGAGCTaGGAGCGGGACACGGGCGAGGGCTGCGTGTGGCGT +
Preference number: 6 (lower is better)
Translates to: RSGMLKALSSWS*ERDTGEGCVWR
Trigger: ACGCCACACGCAGCCCTCGCCCGTGTCCCGCTCCAAGCTCCAGGAGCTGAGAGCCTTGAGCATGCCTGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp TGGGCCCAGGGGTCTTCCGACCCAGGGATGAAGAACTaGCTTCATCGGAACCTCCCGCTGAGGCTCCCCCAC +
Preference number: 6 (lower is better)
Translates to: WAQGSSDPGMKN*LHRNLPLRLPH
Trigger: GTGGGGGAGCCTCAGCGGGAGGTTCCGATGAAGGCAGTTCTTCATCCCTGGGTCGGAAGACCCCTGGGCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 72 bp CTTCCACCAGCTTCCAGGGCTCCCCTTGGGGGCCTCTaGAGAGTCCGTGAGGTTGGCTGCATAGGACGCAGC +
Preference number: 6 (lower is better)
Translates to: LPPASRAPLGGL*RVREVGCIGRS
Trigger: GCTGCGTCCTATGCAGCCAACCTCACGGACTCTGCAGAGGCCCCCAAGGGGAGCCCTGGAAGCTGGTGGAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 72 bp CACCGGCCCGGAGTCAGCACGGGGCGCCCTGCCCTCTaGTCTACACTTAGGAGATTTAGGGGTGGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: HRPGVSTGRPAL*STLRRFRGGWA
Trigger: TGCCCAACCACCCCTAAATCTCCTAAGTGTAGAGCAGAGGGCAGGGCGCCCCGTGCTGACTCCGGGCCGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp ATGGCTGGCCAGGCGCGGCTCACTCTGTCTGTTCCCTaGCACGGACATGCCGTTCCTAGACGCTGCCGGACT +
Preference number: 6 (lower is better)
Translates to: MAGQARLTLSVP*HGHAVPRRCRT
Trigger: AGTCCGGCAGCGTCTAGGAACGGCATGTCCGTGGCAGGGAACAGACAGAGTGAGCCGCGCCTGGCCAGCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp TCCTTTTTCGCCAGTCGGCCTGGGTTGGGCTGTGTCTaGTGCCACATGGCTGGCCAGGCGCGGCTCACTCTG +
Preference number: 6 (lower is better)
Translates to: SFFASRPGLGCV*CHMAGQARLTL
Trigger: CAGAGTGAGCCGCGCCTGGCCAGCCATGTGGCAGCAGACACAGCCCAACCCAGGCCGACTGGCGAAAAAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp GGGGGATGGTCTTTCTGGACAGCAAACCCTTCCCATTaGCTGTGGGAGGCTCCTGCCGGGCAGAGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: GGWSFWTANPSH*LWEAPAGQRAW
Trigger: CCAGGCCCTCTGCCCGGCAGGAGCCTCCCACAGCCAATGGGAAGGGTTTGCTGTCCAGAAAGACCATCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp AGCTTGTCAAGGTCAGGCATGCTCAAGGCTCTCAGCTCCTGGAGCTaGGAGCGGGACACGGGCGAGGGCTGCGTGTGGCGTACCGAGGAC +
Preference number: 6 (lower is better)
Translates to: SLSRSGMLKALSSWS*ERDTGEGCVWRTED
Trigger: GTCCTCGGTACGCCACACGCAGCCCTCGCCCGTGTCCCGCTCCAAGCTCCAGGAGCTGAGAGCCTTGAGCATGCCTGACCTTGACAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp TTTTTCGCCAGTCGGCCTGGGTTGGGCTGTGTCTGCTaGCACATGGCTGGCCAGGCGCGGCTCACTCTGTCT +
Preference number: 6 (lower is better)
Translates to: FFASRPGLGCVC*HMAGQARLTLS
Trigger: AGACAGAGTGAGCCGCGCCTGGCCAGCCATGTGGCAGCAGACACAGCCCAACCCAGGCCGACTGGCGAAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp CAAAGTTCAGCTGGATGTACTCCTGCAGCTTCTGGATaGCCGCCTGGCAGAGCCGCTGCTCCGGCCCATCCC +
Preference number: 6 (lower is better)
Translates to: QSSAGCTPAASG*PPGRAAAPAHP
Trigger: GGGATGGGCCGGAGCAGCGGCTCTGCCAGGCGGCCATCCAGAAGCTGCAGGAGTACATCCAGCTGAACTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502824.1
CDS CCA 72 bp CTTCCTCTGGCGGAGGAGAGGGTTTCGGAGGGCCTGTaGGCTTCCGGGGAGACTGGCTTGTCTGGCAACTGT +
Preference number: 6 (lower is better)
Translates to: LPLAEERVSEGL*ASGETGLSGNC
Trigger: ACAGTTGCCAGACAAGCCAGTCTCCCCGGAAGCCCACAGGCCCTCCGAAACCCTCTCCTCCGCCAGAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp CTGGCCTTGCACTTGGTGACCCTGGGCGATGCAGGCTaGCTGGGATTCTCTGGCCGACTGACTTGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: LALHLVTLGDAG*LGFSGRLTCPV
Trigger: CACAGGGCAAGTCAGTCGGCCAGAGAATCCCAGCCAGCCTGCATCGCCCAGGGTCACCAAGTGCAAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp GCAGTGGCTCGAGTCTGGCTGCATACTGGAGTCACCTaGGAACGTGAAACGGTGTCTGGCCCCCACTGCGGC +
Preference number: 6 (lower is better)
Translates to: AVARVWLHTGVT*ERETVSGPHCG
Trigger: GCCGCAGTGGGGGCCAGACACCGTTTCACGTTCCCAGGTGACTCCAGTATGCAGCCAGACTCGAGCCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 72 bp CTGGGGTCACTGGACACCTCACAGCCAGCGCTGCCCTaGGATTCTTCAGGGGCCTTGTTGGCAGGAGGCCTG +
Preference number: 6 (lower is better)
Translates to: LGSLDTSQPALP*DSSGALLAGGL
Trigger: CAGGCCTCCTGCCAACAAGGCCCCTGAAGAATCCAAGGGCAGCGCTGGCTGTGAGGTGTCCAGTGACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513852.1
CDS CAA 90 bp GAGGAGAGGGTTTCGGAGGGCCTGTGGGCTTCCGGGGAGACTGGCTaGTCTGGCAACTGTCACCTGCTTGTGGAAGAGCCCAGAAGCCCG +
Preference number: 6 (lower is better)
Translates to: EERVSEGLWASGETG*SGNCHLLVEEPRSP
Trigger: CGGGCTTCTGGGCTCTTCCACAAGCAGGTGACAGTTGCCAGACAAGCCAGTCTCCCCGGAAGCCCACAGGCCCTCCGAAACCCTCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp TGGGAAGACCACCTCTGGATGCCTTTGCCTCGGGGACAACACTGCTaGTCACAGGGACCTGGCTGTCCCGAGAGCGACCCAGGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: WEDHLWMPLPRGQHC*SQGPGCPESDPGCV
Trigger: CACACAGCCTGGGTCGCTCTCGGGACAGCCAGGTCCCTGTGACAAGCAGTGTTGTCCCCGAGGCAAAGGCATCCAGAGGTGGTCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp TTGGAGCGGGACACGGGCGAGGGCTGCGTGTGGCGTACCGAGGACTaGTTCCTCTTAACAGGAGAAGCCAGGGTCATCGTTGGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: LERDTGEGCVWRTED*FLLTGEARVIVGVG
Trigger: TCCCACCCCAACGATGACCCTGGCTTCTCCTGTTAAGAGGAACAAGTCCTCGGTACGCCACACGCAGCCCTCGCCCGTGTCCCGCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 72 bp AGAGGAGGGGCAGGTGCAGCACGGCATTGTCCTGGGTaGTGGGCATGGTGCTCACTCCCAGACACCAGCATC +
Preference number: 6 (lower is better)
Translates to: RGGAGAARHCPG*WAWCSLPDTSI
Trigger: GATGCTGGTGTCTGGGAGTGAGCACCATGCCCATCACCCAGGACAATGCCGTGCTGCACCTGCCCCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502824.1
CDS GCA 72 bp TTCCAAGTTCAGGGTCAGGGCCGTTCTCCAGCTCAGTaGTGGGGTCACTGGACACCTCACAGCCAGCGCTGC +
Preference number: 6 (lower is better)
Translates to: FQVQGQGRSPAQ*WGHWTPHSQRC
Trigger: GCAGCGCTGGCTGTGAGGTGTCCAGTGACCCCAGCACTGAGCTGGAGAACGGCCCTGACCCTGAACTTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513852.1
CDS GCA 72 bp GACCACCTCTGGATGCCTTTGCCTCGGGGACAACACTaGTTGTCACAGGGACCTGGCTGTCCCGAGAGCGAC +
Preference number: 6 (lower is better)
Translates to: DHLWMPLPRGQH*LSQGPGCPESD
Trigger: GTCGCTCTCGGGACAGCCAGGTCCCTGTGACAAGCAGTGTTGTCCCCGAGGCAAAGGCATCCAGAGGTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp GCTGCAGGAACTCAAGCTGCGTCTCAACAACCTTGCTaGTGCGTCACCTGGGTGGCCCAGGCTCCCGGAAAC +
Preference number: 6 (lower is better)
Translates to: AAGTQAASQQPC*CVTWVAQAPGN
Trigger: GTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp TTCGCTGCAGGAACTCAAGCTGCGTCTCAACAACCTTaGTGCTGCGTCACCTGGGTGGCCCAGGCTCCCGGA +
Preference number: 6 (lower is better)
Translates to: FAAGTQAASQQP*CCVTWVAQAPG
Trigger: TCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCAGCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp AGCTCCTGGAGCTTGGAGCGGGACACGGGCGAGGGCTaGGTGTGGCGTACCGAGGACTTGTTCCTCTTAACA +
Preference number: 6 (lower is better)
Translates to: SSWSLERDTGEG*VWRTEDLFLLT
Trigger: TGTTAAGAGGAACAAGTCCTCGGTACGCCACACGCAGCCCTCGCCCGTGTCCCGCTCCAAGCTCCAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp GGTCAGGGCCGTTCTCCAGCTCAGTGCTGGGGTCACTaGACACCTCACAGCCAGCGCTGCCCTTGGATTCTT +
Preference number: 6 (lower is better)
Translates to: GQGRSPAQCWGH*TPHSQRCPWIL
Trigger: AAGAATCCAAGGGCAGCGCTGGCTGTGAGGTGTCCAGTGACCCCAGCACTGAGCTGGAGAACGGCCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513852.1
CDS CCA 72 bp CCACAAGCTGCACCATTCCCGTGGCGGAGCGAAGAATaGCCACTGCTTCCTCGTGGGAGAGCCCGACCAGTA +
Preference number: 6 (lower is better)
Translates to: PQAAPFPWRSEE*PLLPRGRARPV
Trigger: TACTGGTCGGGCTCTCCCACGAGGAAGCAGTGGCCATTCTTCGCTCCGCCACGGGAATGGTGCAGCTTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp CCCGCTCCCCTGAGGGCAGCCACCCTCCTGGTATTGTaGGGTGTGCTGGTTTCCGATGCTGATCGAGTCTTG +
Preference number: 6 (lower is better)
Translates to: PAPLRAATLLVL*GVLVSDADRVL
Trigger: CAAGACTCGATCAGCATCGGAAACCAGCACACCCCACAATACCAGGAGGGTGGCTGCCCTCAGGGGAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp CCTCCCAATGGGAGGCTTGGAGCTCACCGACAAAAATaGGGAAGCCCCGGACTTGGCTACAGGCCGGTCAGC +
Preference number: 6 (lower is better)
Translates to: PPNGRLGAHRQK*GSPGLGYRPVS
Trigger: GCTGACCGGCCTGTAGCCAAGTCCGGGGCTTCCCCATTTTTGTCGGTGAGCTCCAAGCCTCCCATTGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp CAAGCTGCGTCTCAACAACCTTGCTGCTGCGTCACCTaGGTGGCCCAGGCTCCCGGAAACAATGCTGCCGGA +
Preference number: 6 (lower is better)
Translates to: QAASQQPCCCVT*VAQAPGNNAAG
Trigger: TCCGGCAGCATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp GTTTCGGAGGGCCTGTGGGCTTCCGGGGAGACTGGCTaGTCTGGCAACTGTCACCTGCTTGTGGAAGAGCCC +
Preference number: 6 (lower is better)
Translates to: VSEGLWASGETG*SGNCHLLVEEP
Trigger: GGGCTCTTCCACAAGCAGGTGACAGTTGCCAGACAAGCCAGTCTCCCCGGAAGCCCACAGGCCCTCCGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp CACCTCTGGATGCCTTTGCCTCGGGGACAACACTGCTaGTCACAGGGACCTGGCTGTCCCGAGAGCGACCCA +
Preference number: 6 (lower is better)
Translates to: HLWMPLPRGQHC*SQGPGCPESDP
Trigger: TGGGTCGCTCTCGGGACAGCCAGGTCCCTGTGACAAGCAGTGTTGTCCCCGAGGCAAAGGCATCCAGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp TTTCGCTGCAGGAACTCAAGCTGCGTCTCAACAACCTaGCTGCTGCGTCACCTGGGTGGCCCAGGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: FRCRNSSCVSTT*LLRHLGGPGSR
Trigger: CCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCAGCGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp TGTGGGCTTCCGGGGAGACTGGCTTGTCTGGCAACTGTCACCTGCTaGTGGAAGAGCCCAGAAGCCCGATGGCTCCCAAGAGTCACGAGG +
Preference number: 6 (lower is better)
Translates to: CGLPGRLACLATVTC*WKSPEARWLPRVTR
Trigger: CCTCGTGACTCTTGGGAGCCATCGGGCTTCTGGGCTCTTCCACAAGCAGGTGACAGTTGCCAGACAAGCCAGTCTCCCCGGAAGCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp TCATTGGCTCTGCCAGTCAGGTTCACTGTCTGTGAGCCACTGGGCTaGGCCTCAGCCTCGGATCTCTTGCAGTGGGGGCTTACCCTGGCC +
Preference number: 6 (lower is better)
Translates to: SLALPVRFTVCEPLG*ASASDLLQWGLTLA
Trigger: GGCCAGGGTAAGCCCCCACTGCAAGAGATCCGAGGCTGAGGCCAAGCCCAGTGGCTCACAGACAGTGAACCTGACTGGCAGAGCCAATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp CCCCCAGCCTTCACAGCATTCGCAGCAGGGGCCTCAGAGTTGACTTaGGCCTTGCCCTTGAGGCTGAGCCTCTTCAGCTTCGGACCACAC +
Preference number: 6 (lower is better)
Translates to: PPAFTAFAAGASELT*ALPLRLSLFSFGPH
Trigger: GTGTGGTCCGAAGCTGAAGAGGCTCAGCCTCAAGGGCAAGGCCAAAGTCAACTCTGAGGCCCCTGCTGCGAATGCTGTGAAGGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 72 bp CATCGGAACCTCCCGCTGAGGCTCCCCCACTGGTATTaGAGTTCGGGGAGGCGGATCTGCTCATGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: HRNLPLRLPHWY*SSGRRICSCVW
Trigger: CCACACACATGAGCAGATCCGCCTCCCCGAACTTCAATACCAGTGGGGGAGCCTCAGCGGGAGGTTCCGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 72 bp TTCCCGGGTGATCCTCGTCCTCAGAACCGGCCACCATaGAGTCTGACAAGGGGCCAGGGACATCGTGGGCAA +
Preference number: 6 (lower is better)
Translates to: FPGDPRPQNRPP*SLTRGQGHRGQ
Trigger: TTGCCCACGATGTCCCTGGCCCCTTGTCAGACTTCATGGTGGCCGGTTCTGAGGACGAGGATCACCCGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS TCA 72 bp GCCCCAGCTCTGATGCAGCTTTGGGCAGGTTCTCTGTaGGGTGGCTGGCATCCAGATGGGACAGAGCACTGG +
Preference number: 6 (lower is better)
Translates to: APALMQLWAGSL*GGWHPDGTEHW
Trigger: CCAGTGCTCTGTCCCATCTGGATGCCAGCCACCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000503961.1
CDS GCA 72 bp TGGTATTCCTGTGAGGCACTGGAAGAGTCCAGCAGCTaGGGGAGGGAGTGTTTCCGGCCATCTCGGGAGACC +
Preference number: 6 (lower is better)
Translates to: WYSCEALEESSS*GRECFRPSRET
Trigger: GGTCTCCCGAGATGGCCGGAAACACTCCCTCCCGCAGCTGCTGGACTCTTCCAGTGCCTCACAGGAATACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 72 bp CTTCCGGGGAGACTGGCTTGTCTGGCAACTGTCACCTaGTTGTGGAAGAGCCCAGAAGCCCGATGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: LPGRLACLATVT*LWKSPEARWLP
Trigger: TGGGAGCCATCGGGCTTCTGGGCTCTTCCACAAGCAGGTGACAGTTGCCAGACAAGCCAGTCTCCCCGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp TTTCCTTGCTGGCCACCACAAGCTGCACCATTCCCGTaGCGGAGCGAAGAATGGCCACTGCTTCCTCGTGGG +
Preference number: 6 (lower is better)
Translates to: FPCWPPQAAPFP*RSEEWPLLPRG
Trigger: CCCACGAGGAAGCAGTGGCCATTCTTCGCTCCGCCACGGGAATGGTGCAGCTTGTGGTGGCCAGCAAGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp CCCGATGGCTCCCAAGAGTCACGAGGCTGTTGGCTCTaGGTTTTCCAGGCTCCTTGTGAGTGGAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: PDGSQESRGCWL*VFQAPCEWRCW
Trigger: CCAGCACCTCCACTCACAAGGAGCCTGGAAAACCCAGAGCCAACAGCCTCGTGACTCTTGGGAGCCATCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp GAGGGTTTCGGAGGGCCTGTGGGCTTCCGGGGAGACTaGCTTGTCTGGCAACTGTCACCTGCTTGTGGAAGA +
Preference number: 6 (lower is better)
Translates to: EGFGGPVGFRGD*LVWQLSPACGR
Trigger: TCTTCCACAAGCAGGTGACAGTTGCCAGACAAGCCAGTCTCCCCGGAAGCCCACAGGCCCTCCGAAACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp TGGCTCTGCCAGTCAGGTTCACTGTCTGTGAGCCACTaGGCTTGGCCTCAGCCTCGGATCTCTTGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: WLCQSGSLSVSH*AWPQPRISCSG
Trigger: CCCACTGCAAGAGATCCGAGGCTGAGGCCAAGCCCAGTGGCTCACAGACAGTGAACCTGACTGGCAGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp CCGAGACATGGCCACATGCTTCTTTGGTGTTGTCAGTaGATGGCAGCATGGAGAGGCTGGCCTGCGGTGCCC +
Preference number: 6 (lower is better)
Translates to: PRHGHMLLWCCQ*MAAWRGWPAVP
Trigger: GGGCACCGCAGGCCAGCCTCTCCATGCTGCCATCCACTGACAACACCAAAGAAGCATGTGGCCATGTCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp TGGAGCTTGGAGCGGGACACGGGCGAGGGCTGCGTGTaGCGTACCGAGGACTTGTTCCTCTTAACAGGAGAA +
Preference number: 6 (lower is better)
Translates to: WSLERDTGEGCV*RTEDLFLLTGE
Trigger: TTCTCCTGTTAAGAGGAACAAGTCCTCGGTACGCCACACGCAGCCCTCGCCCGTGTCCCGCTCCAAGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp GGAGGAAGGTTGACTCGTTACAGCACATCCGTGGGGTaGAAGGCCCAGCAGCCTCTCCAGGTGATGTCGGGT +
Preference number: 6 (lower is better)
Translates to: GGRLTRYSTSVG*KAQQPLQVMSG
Trigger: ACCCGACATCACCTGGAGAGGCTGCTGGGCCTTCCACCCCACGGATGTGCTGTAACGAGTCAACCTTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503961.1
CDS CAA 72 bp CTGCCAGTCAGGTTCACTGTCTGTGAGCCACTGGGCTaGGCCTCAGCCTCGGATCTCTTGCAGTGGGGGCTT +
Preference number: 6 (lower is better)
Translates to: LPVRFTVCEPLG*ASASDLLQWGL
Trigger: AAGCCCCCACTGCAAGAGATCCGAGGCTGAGGCCAAGCCCAGTGGCTCACAGACAGTGAACCTGACTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp GAACTGCCTTCATCGGAACCTCCCGCTGAGGCTCCCCCACTGGTATaGAAGTTCGGGGAGGCGGATCTGCTCATGTGTGTGGGTGTCGAG +
Preference number: 6 (lower is better)
Translates to: ELPSSEPPAEAPPLV*KFGEADLLMCVGVE
Trigger: CTCGACACCCACACACATGAGCAGATCCGCCTCCCCGAACTTCAATACCAGTGGGGGAGCCTCAGCGGGAGGTTCCGATGAAGGCAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 72 bp GCATGGCGGACGTTGACGGAGTTCACTTCCAGGATTTaGTCCCCGCGGCTCAGGTTGCTCTCCATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: AWRTLTEFTSRI*SPRLRLLSILA
Trigger: GGCCAAGATGGAGAGCAACCTGAGCCGCGGGGATCAAATCCTGGAAGTGAACTCCGTCAACGTCCGCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS TCA 72 bp CCTCCTGGTATTGTGGGGTGTGCTGGTTTCCGATGCTaGTCGAGTCTTGCTGTAGTCAGGGGGAGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: PPGIVGCAGFRC*SSLAVVRGSRC
Trigger: GCAGCGGCTCCCCCTGACTACAGCAAGACTCGATCAGCATCGGAAACCAGCACACCCCACAATACCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 72 bp TGGTGGGTTCTGCCGAGAGATGGTCAGTGTCATGATTaGGGGAGACTTGGCCATCTGGGGCAGGAGGGTGCC +
Preference number: 6 (lower is better)
Translates to: WWVLPRDGQCHD*GRLGHLGQEGA
Trigger: GGCACCCTCCTGCCCCAGATGGCCAAGTCTCCCTCAATCATGACACTGACCATCTCTCGGCAGAACCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp AGCCCAGTAGCACTGTTGGCCTCCCAATTCTGGGGCTaGCCTCCTGGCTGTGTTGCTGCTGTACTTGCATCC +
Preference number: 6 (lower is better)
Translates to: SPVALLASQFWG*PPGCVAAVLAS
Trigger: GGATGCAAGTACAGCAGCAACACAGCCAGGAGGGCAGCCCCAGAATTGGGAGGCCAACAGTGCTACTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397559.3
ENST00000513490.1
ENST00000515115.5
CDS GCA 72 bp CCCACGTCCCCTGGGGTCCCTGGCCATCATCAGCTTTaGCTGTGTTCATGTTCAGGCTGGCAGATGAGCCTA +
Preference number: 6 (lower is better)
Translates to: PTSPGVPGHHQL*LCSCSGWQMSL
Trigger: TAGGCTCATCTGCCAGCCTGAACATGAACACAGGCAAAGCTGATGATGGCCAGGGACCCCAGGGGACGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS GCA 72 bp CTCTCATCCACAGCAAAGTTCAGCTGGATGTACTCCTaGAGCTTCTGGATGGCCGCCTGGCAGAGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LSSTAKFSWMYS*SFWMAAWQSRC
Trigger: GCAGCGGCTCTGCCAGGCGGCCATCCAGAAGCTGCAGGAGTACATCCAGCTGAACTTTGCTGTGGATGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502824.1
CDS GCA 72 bp TCCTCTGCGGAGTTTTCCTTGCTGGCCACCACAAGCTaGACCATTCCCGTGGCGGAGCGAAGAATGGCCACT +
Preference number: 6 (lower is better)
Translates to: SSAEFSLLATTS*TIPVAERRMAT
Trigger: AGTGGCCATTCTTCGCTCCGCCACGGGAATGGTGCAGCTTGTGGTGGCCAGCAAGGAAAACTCCGCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 72 bp GCAGGAACTCAAGCTGCGTCTCAACAACCTTGCTGCTaGGTCACCTGGGTGGCCCAGGCTCCCGGAAACAAT +
Preference number: 6 (lower is better)
Translates to: AGTQAASQQPCC*VTWVAQAPGNN
Trigger: ATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp GGGGCAGGAGGGTGCCGGCTTCGCTTTGGTTTTCGCTaGAGGAACTCAAGCTGCGTCTCAACAACCTTGCTG +
Preference number: 6 (lower is better)
Translates to: GAGGCRLRFGFR*RNSSCVSTTLL
Trigger: CAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCAGCGAAAACCAAAGCGAAGCCGGCACCCTCCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp CTCATCCCGCAGTCGGACCTTCCCACTCTTCCCTGCTaGGCTGTTCTTCCTCAGCTCTGTCACCCAGATGCA +
Preference number: 6 (lower is better)
Translates to: LIPQSDLPTLPC*AVLPQLCHPDA
Trigger: TGCATCTGGGTGACAGAGCTGAGGAAGAACAGCCCAGCAGGGAAGAGTGGGAAGGTCCGACTGCGGGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502824.1
CDS CCA 72 bp CGGCCAACTTCCTCCCGTGCCAGGCAGTCACTCGATTaGAAGTCCGTCTTCCCACCTTTTGAGAAGCGGCGT +
Preference number: 6 (lower is better)
Translates to: RPTSSRARQSLD*KSVFPPFEKRR
Trigger: ACGCCGCTTCTCAAAAGGTGGGAAGACGGACTTCCAATCGAGTGACTGCCTGGCACGGGAGGAAGTTGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp ACTGTCACCTGCTTGTGGAAGAGCCCAGAAGCCCGATaGCTCCCAAGAGTCACGAGGCTGTTGGCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: TVTCLWKSPEAR*LPRVTRLLALG
Trigger: ACCCAGAGCCAACAGCCTCGTGACTCTTGGGAGCCATCGGGCTTCTGGGCTCTTCCACAAGCAGGTGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp TGCCAGTCAGGTTCACTGTCTGTGAGCCACTGGGCTTaGCCTCAGCCTCGGATCTCTTGCAGTGGGGGCTTA +
Preference number: 6 (lower is better)
Translates to: CQSGSLSVSHWA*PQPRISCSGGL
Trigger: TAAGCCCCCACTGCAAGAGATCCGAGGCTGAGGCCAAGCCCAGTGGCTCACAGACAGTGAACCTGACTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp TTACTGTGGTTACCTGGAGCTCCCTGTCTCTGCTCCTaGGATGTGAGGGGGTCTCCTGGCAGGACAGCACCA +
Preference number: 6 (lower is better)
Translates to: LLWLPGAPCLCS*DVRGSPGRTAP
Trigger: TGGTGCTGTCCTGCCAGGAGACCCCCTCACATCCCAGGAGCAGAGACAGGGAGCTCCAGGTAACCACAGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp GGGCAACCTCTGTCGGGTTCAGAGAGGACAGCCATGTaGAACCTGCTCCACATGCCTTGCTCAGGAACAGGC +
Preference number: 6 (lower is better)
Translates to: GQPLSGSERTAM*NLLHMPCSGTG
Trigger: GCCTGTTCCTGAGCAAGGCATGTGGAGCAGGTTCCACATGGCTGTCCTCTCTGAACCCGACAGAGGTTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp TTGGCCATCTGGGGCAGGAGGGTGCCGGCTTCGCTTTaGTTTTCGCTGCAGGAACTCAAGCTGCGTCTCAAC +
Preference number: 6 (lower is better)
Translates to: LAIWGRRVPASL*FSLQELKLRLN
Trigger: GTTGAGACGCAGCTTGAGTTCCTGCAGCGAAAACCAAAGCGAAGCCGGCACCCTCCTGCCCCAGATGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp TCATCGGAACCTCCCGCTGAGGCTCCCCCACTGGTATaGAAGTTCGGGGAGGCGGATCTGCTCATGTGTGTG +
Preference number: 6 (lower is better)
Translates to: SSEPPAEAPPLV*KFGEADLLMCV
Trigger: CACACACATGAGCAGATCCGCCTCCCCGAACTTCAATACCAGTGGGGGAGCCTCAGCGGGAGGTTCCGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp GGGCAGCAGTGCCCCGAGACATGGCCACATGCTTCTTaGGTGTTGTCAGTGGATGGCAGCATGGAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GQQCPETWPHAS*VLSVDGSMERL
Trigger: CAGCCTCTCCATGCTGCCATCCACTGACAACACCAAAGAAGCATGTGGCCATGTCTCGGGGCACTGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp CTTGGCCATCTGGGGCAGGAGGGTGCCGGCTTCGCTTaGGTTTTCGCTGCAGGAACTCAAGCTGCGTCTCAA +
Preference number: 6 (lower is better)
Translates to: LGHLGQEGAGFA*VFAAGTQAASQ
Trigger: TTGAGACGCAGCTTGAGTTCCTGCAGCGAAAACCAAAGCGAAGCCGGCACCCTCCTGCCCCAGATGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp GACACGGGCGAGGGCTGCGTGTGGCGTACCGAGGACTaGTTCCTCTTAACAGGAGAAGCCAGGGTCATCGTT +
Preference number: 6 (lower is better)
Translates to: DTGEGCVWRTED*FLLTGEARVIV
Trigger: AACGATGACCCTGGCTTCTCCTGTTAAGAGGAACAAGTCCTCGGTACGCCACACGCAGCCCTCGCCCGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp CTGGACACCTCACAGCCAGCGCTGCCCTTGGATTCTTCAGGGGCCTaGTTGGCAGGAGGCCTGGAGATGACCCCAAACTTTCTGGTTCGT +
Preference number: 6 (lower is better)
Translates to: LDTSQPALPLDSSGA*LAGGLEMTPNFLVR
Trigger: ACGAACCAGAAAGTTTGGGGTCATCTCCAGGCCTCCTGCCAACAAGGCCCCTGAAGAATCCAAGGGCAGCGCTGGCTGTGAGGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513852.1
CDS CAA 90 bp CGCTTTGGTTTTCGCTGCAGGAACTCAAGCTGCGTCTCAACAACCTaGCTGCTGCGTCACCTGGGTGGCCCAGGCTCCCGGAAACAATGC +
Preference number: 6 (lower is better)
Translates to: RFGFRCRNSSCVSTT*LLRHLGGPGSRKQC
Trigger: GCATTGTTTCCGGGAGCCTGGGCCACCCAGGTGACGCAGCAGCAAGGTTGTTGAGACGCAGCTTGAGTTCCTGCAGCGAAAACCAAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp GGTGGGTTCTGCCGAGAGATGGTCAGTGTCATGATTGAGGGAGACTaGGCCATCTGGGGCAGGAGGGTGCCGGCTTCGCTTTGGTTTTCG +
Preference number: 6 (lower is better)
Translates to: GGFCREMVSVMIEGD*AIWGRRVPASLWFS
Trigger: CGAAAACCAAAGCGAAGCCGGCACCCTCCTGCCCCAGATGGCCAAGTCTCCCTCAATCATGACACTGACCATCTCTCGGCAGAACCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp CCCGTCTGGGAAGACGGAGACCTTGCTGCAGAAGCATCCAGCTCCTaGATGAAGCTGTCAATGTCCGTCACAGGGCTCTCTCTACTCCCC +
Preference number: 6 (lower is better)
Translates to: PVWEDGDLAAEASSS*MKLSMSVTGLSLLP
Trigger: GGGGAGTAGAGAGAGCCCTGTGACGGACATTGACAGCTTCATCAAGGAGCTGGATGCTTCTGCAGCAAGGTCTCCGTCTTCCCAGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 72 bp CGGATCTGCTCATGTGTGTGGGTGTCGAGCAGGGTGTaGGGCTGGGGCTCACCAACTTTGTGCGTACCGTTA +
Preference number: 6 (lower is better)
Translates to: RICSCVWVSSRV*GWGSPTLCVPL
Trigger: TAACGGTACGCACAAAGTTGGTGAGCCCCAGCCTCACACCCTGCTCGACACCCACACACATGAGCAGATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 72 bp ATCCCCGCGGCTCAGGTTGCTCTCCATCTTGGCCACTaGTCCTGGAGCAAGGCTGTGAATGTAGATGCCAGG +
Preference number: 6 (lower is better)
Translates to: IPAAQVALHLGH*SWSKAVNVDAR
Trigger: CCTGGCATCTACATTCACAGCCTTGCTCCAGGATCAGTGGCCAAGATGGAGAGCAACCTGAGCCGCGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 72 bp GTGATCCTCGTCCTCAGAACCGGCCACCATGAAGTCTaGCAAGGGGCCAGGGACATCGTGGGCAAAGTACTG +
Preference number: 6 (lower is better)
Translates to: VILVLRTGHHEV*QGARDIVGKVL
Trigger: CAGTACTTTGCCCACGATGTCCCTGGCCCCTTGTCAGACTTCATGGTGGCCGGTTCTGAGGACGAGGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS TCA 72 bp CAGGCTTGGGAGAGGTCAGGGGCGAGACAAATGTCCTaGTGCTCGTGTCAGACACTGAGGGTTTCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: QAWERSGARQMS*CSCQTLRVSVA
Trigger: GGCCACTGAAACCCTCAGTGTCTGACACGAGCATCAGGACATTTGTCTCGCCCCTGACCTCTCCCAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 72 bp TCTCTGGTGGGTTCTGCCGAGAGATGGTCAGTGTCATaGTTGAGGGAGACTTGGCCATCTGGGGCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: SLVGSAERWSVS*LRETWPSGAGG
Trigger: CCCTCCTGCCCCAGATGGCCAAGTCTCCCTCAATCATGACACTGACCATCTCTCGGCAGAACCCACCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 72 bp CAGCTCAGTTTTGAAGAGCACGGCGCTCGGCCCTGCTaGGTAATCCTCGCTGCAGAGCTTGTCAAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: QLSFEEHGARPC*VILAAELVKVR
Trigger: CCTGACCTTGACAAGCTCTGCAGCGAGGATTACTCAGCAGGGCCGAGCGCCGTGCTCTTCAAAACTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 72 bp AGGCAGATCCTGGGCAGCTTCACCCGTATCACTGGCTaGACTGGGTGTCTCAGCAGCACTGGTTTTAGGGCC +
Preference number: 6 (lower is better)
Translates to: RQILGSFTRITG*TGCLSSTGFRA
Trigger: GGCCCTAAAACCAGTGCTGCTGAGACACCCAGTTCAGCCAGTGATACGGGTGAAGCTGCCCAGGATCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp GATCTCATCCCGCAGTCGGACCTTCCCACTCTTCCCTaGTGGGCTGTTCTTCCTCAGCTCTGTCACCCAGAT +
Preference number: 6 (lower is better)
Translates to: DLIPQSDLPTLP*WAVLPQLCHPD
Trigger: ATCTGGGTGACAGAGCTGAGGAAGAACAGCCCAGCAGGGAAGAGTGGGAAGGTCCGACTGCGGGATGAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502824.1
CDS GCA 72 bp AGAGCCACTGTCCCCCGTCTGGGAAGACGGAGACCTTaGTGCAGAAGCATCCAGCTCCTTGATGAAGCTGTC +
Preference number: 6 (lower is better)
Translates to: RATVPRLGRRRP*CRSIQLLDEAV
Trigger: GACAGCTTCATCAAGGAGCTGGATGCTTCTGCAGCAAGGTCTCCGTCTTCCCAGACGGGGGACAGTGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp CAGCATCGCCATACATGGATGACAGAGACGGCTCCGTaGTGTCACCCAGGCCTGATAGGGAGGTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: QHRHTWMTETAP*CHPGLIGRCCL
Trigger: AAGACAGCACCTCCCTATCAGGCCTGGGTGACAGCACGGAGCCGTCTCTGTCATCCATGTATGGCGATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp GTTCAGAGAGGACAGCCATGTGGAACCTGCTCCACATaGCTTGCTCAGGAACAGGCTTGGGAGAGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: VQRGQPCGTCST*LAQEQAWERSG
Trigger: CCCTGACCTCTCCCAAGCCTGTTCCTGAGCAAGGCATGTGGAGCAGGTTCCACATGGCTGTCCTCTCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp CTCTGTCGGGTTCAGAGAGGACAGCCATGTGGAACCTaGTCCACATGCCTTGCTCAGGAACAGGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: LCRVQRGQPCGT*STCLAQEQAWE
Trigger: CTCCCAAGCCTGTTCCTGAGCAAGGCATGTGGAGCAGGTTCCACATGGCTGTCCTCTCTGAACCCGACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp AGTAATCCTCGCTGCAGAGCTTGTCAAGGTCAGGCATaGTCAAGGCTCTCAGCTCCTGGAGCTTGGAGCGGG +
Preference number: 6 (lower is better)
Translates to: SNPRCRACQGQA*SRLSAPGAWSG
Trigger: CCCGCTCCAAGCTCCAGGAGCTGAGAGCCTTGAGCATGCCTGACCTTGACAAGCTCTGCAGCGAGGATTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp CTTTGGTGTTGTCAGTGGATGGCAGCATGGAGAGGCTaGCCTGCGGTGCCCTTGAGGACACAGAATCTGCTC +
Preference number: 6 (lower is better)
Translates to: LWCCQWMAAWRG*PAVPLRTQNLL
Trigger: GAGCAGATTCTGTGTCCTCAAGGGCACCGCAGGCCAGCCTCTCCATGCTGCCATCCACTGACAACACCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp GGCAGCCTGGGTGGGAAGATGAGCAGGACTCGAGGGTaGATTGGGGCAGCCACGTGTGGAACAAATCTCAAT +
Preference number: 6 (lower is better)
Translates to: GSLGGKMSRTRG*IGAATCGTNLN
Trigger: ATTGAGATTTGTTCCACACGTGGCTGCCCCAATCCACCCTCGAGTCCTGCTCATCTTCCCACCCAGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp TCGTGTCAGACACTGAGGGTTTCAGTGGCCCAGAGGTaGCAAGAGGTGGCTTGCTTTCCAGCACACACTGGG +
Preference number: 6 (lower is better)
Translates to: SCQTLRVSVAQR*QEVACFPAHTG
Trigger: CCCAGTGTGTGCTGGAAAGCAAGCCACCTCTTGCCACCTCTGGGCCACTGAAACCCTCAGTGTCTGACACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp TGCCACTCCTGCTCCTGCAAAGGGAAACCCTGCCCCTaGCTATGGCTGTCTTCACAAACACACTCGCTGCCT +
Preference number: 6 (lower is better)
Translates to: CHSCSCKGKPCP*LWLSSQTHSLP
Trigger: AGGCAGCGAGTGTGTTTGTGAAGACAGCCATAGCCAGGGGCAGGGTTTCCCTTTGCAGGAGCAGGAGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 72 bp TCACAGCCAGCGCTGCCCTTGGATTCTTCAGGGGCCTaGTTGGCAGGAGGCCTGGAGATGACCCCAAACTTT +
Preference number: 6 (lower is better)
Translates to: SQPALPLDSSGA*LAGGLEMTPNF
Trigger: AAAGTTTGGGGTCATCTCCAGGCCTCCTGCCAACAAGGCCCCTGAAGAATCCAAGGGCAGCGCTGGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513852.1
CDS CAA 72 bp AGCATGGCGGACGTTGACGGAGTTCACTTCCAGGATTaGATCCCCGCGGCTCAGGTTGCTCTCCATCTTGGC +
Preference number: 6 (lower is better)
Translates to: SMADVDGVHFQD*IPAAQVALHLG
Trigger: GCCAAGATGGAGAGCAACCTGAGCCGCGGGGATCAAATCCTGGAAGTGAACTCCGTCAACGTCCGCCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS CAA 72 bp CGGGGTCGTTCCTCTTGGTTGTGGACGTCCATGCCCTaGGAAGAGGAAATTGAGACACGCCTCGGGTCATCC +
Preference number: 6 (lower is better)
Translates to: RGRSSWLWTSMP*EEEIETRLGSS
Trigger: GGATGACCCGAGGCGTGTCTCAATTTCCTCTTCCAAGGGCATGGACGTCCACAACCAAGAGGAACGACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp CCAGTCATGGGTTGTTGCCCCAGCTCTGATGCAGCTTaGGGCAGGTTCTCTGTGAGGTGGCTGGCATCCAGA +
Preference number: 6 (lower is better)
Translates to: PVMGCCPSSDAA*GRFSVRWLASR
Trigger: TCTGGATGCCAGCCACCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAACCCATGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502489.5
ENST00000503961.1
CDS CAA 90 bp ACAGCCATGTGGAACCTGCTCCACATGCCTTGCTCAGGAACAGGCTaGGGAGAGGTCAGGGGCGAGACAAATGTCCTGATGCTCGTGTCA +
Preference number: 6 (lower is better)
Translates to: TAMWNLLHMPCSGTG*GEVRGETNVLMLVS
Trigger: TGACACGAGCATCAGGACATTTGTCTCGCCCCTGACCTCTCCCAAGCCTGTTCCTGAGCAAGGCATGTGGAGCAGGTTCCACATGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 72 bp TGGCGTGGACTTTGCTTAAAGCAGCATGGCGGACGTTaGCGGAGTTCACTTCCAGGATTTGATCCCCGCGGC +
Preference number: 6 (lower is better)
Translates to: WRGLCLKQHGGR*RSSLPGFDPRG
Trigger: GCCGCGGGGATCAAATCCTGGAAGTGAACTCCGTCAACGTCCGCCATGCTGCTTTAAGCAAAGTCCACGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS TCA 72 bp TGGATCATTGGCTCTGCCAGTCAGGTTCACTGTCTGTaGGCCACTGGGCTTGGCCTCAGCCTCGGATCTCTT +
Preference number: 6 (lower is better)
Translates to: WIIGSASQVHCL*ATGLGLSLGSL
Trigger: AAGAGATCCGAGGCTGAGGCCAAGCCCAGTGGCTCACAGACAGTGAACCTGACTGGCAGAGCCAATGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 72 bp GCTGTCCAGTTCAGTCATGGGTTGTTGCCCCAGCTCTaGTGCAGCTTTGGGCAGGTTCTCTGTGAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: AVQFSHGLLPQL*CSFGQVLCEVA
Trigger: AGCCACCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAACCCATGACTGAACTGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 72 bp GTCAGGGTCCTCGTGGTCGGCTACATGGAGCCGCTGTaGCACTGCCTTAGAAAGTGTTTTGTGGGAGGTCTG +
Preference number: 6 (lower is better)
Translates to: VRVLVVGYMEPL*HCLRKCFVGGL
Trigger: CAGACCTCCCACAAAACACTTTCTAAGGCAGTGTCACAGCGGCTCCATGTAGCCGACCACGAGGACCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp CCACTGAGCTACCAAGAAGAGGTGCCGAGATGGCCTTaGTCACCAGTGTTTTCCGGGGTCGTTCCTCTTGGT +
Preference number: 6 (lower is better)
Translates to: PLSYQEEVPRWP*SPVFSGVVPLG
Trigger: ACCAAGAGGAACGACCCCGGAAAACACTGGTGAGCAAGGCCATCTCGGCACCTCTTCTTGGTAGCTCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 72 bp GGACTCTCGAGTCCAGATCGCATGGATCATTGGCTCTaGCAGTCAGGTTCACTGTCTGTGAGCCACTGGGCT +
Preference number: 6 (lower is better)
Translates to: GLSSPDRMDHWL*QSGSLSVSHWA
Trigger: AGCCCAGTGGCTCACAGACAGTGAACCTGACTGGCAGAGCCAATGATCCATGCGATCTGGACTCGAGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 72 bp GGTTTGTTCTTTCGAGGCGATCGCTGGCCATTATGTTaGCTCCTTTTTCGCCAGTCGGCCTGGGTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: GLFFRGDRWPLC*LLFRQSAWVGL
Trigger: CAGCCCAACCCAGGCCGACTGGCGAAAAAGGAGGCAACATAATGGCCAGCGATCGCCTCGAAAGAACAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp CATCTGGCCCCACTGACATCAACTCCAACCATCAGCTaGCCATTCAGTGAGAGGATCTCATCCCGCAGTCGG +
Preference number: 6 (lower is better)
Translates to: HLAPLTSTPTIS*PFSERISSRSR
Trigger: CCGACTGCGGGATGAGATCCTCTCACTGAATGGGCAGCTGATGGTTGGAGTTGATGTCAGTGGGGCCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS GCA 72 bp AGGTTAAGCCCTCCAGGCGCTCAGCGTTTGATTGATTaGTCTGCAGGGTCTGCTTCAAGACCAGAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: RLSPPGAQRLID*SAGSASRPEAL
Trigger: CAGGGCCTCTGGTCTTGAAGCAGACCCTGCAGAGCAATCAATCAAACGCTGAGCGCCTGGAGGGCTTAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 72 bp TTAAAAGCGTCCCAGCATCTCTACTGTGCAGCTTACTaGACCGGGCCCCCAGCTGGACGCTGTCAGTGTATG +
Preference number: 6 (lower is better)
Translates to: LKASQHLYCAAY*TGPPAGRCQCM
Trigger: CATACACTGACAGCGTCCAGCTGGGGGCCCGGTGCAGTAAGCTGCACAGTAGAGATGCTGGGACGCTTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 72 bp CATCAGGAATTTAAAAGCGTCCCAGCATCTCTACTGTaGAGCTTACTGCACCGGGCCCCCAGCTGGACGCTG +
Preference number: 6 (lower is better)
Translates to: HQEFKSVPASLL*SLLHRAPSWTL
Trigger: CAGCGTCCAGCTGGGGGCCCGGTGCAGTAAGCTGCACAGTAGAGATGCTGGGACGCTTTTAAATTCCTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CCA 72 bp ATTAGGGTGCCGGCCGATGACAAGGCGAACGGGTCCTaGAGGGCATTTACTCAAGATGGCGTGGACTTTGCT +
Preference number: 6 (lower is better)
Translates to: IRVPADDKANGS*RAFTQDGVDFA
Trigger: AGCAAAGTCCACGCCATCTTGAGTAAATGCCCTCCAGGACCCGTTCGCCTTGTCATCGGCCGGCACCCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS CCA 72 bp GGGGTCGTTCCTCTTGGTTGTGGACGTCCATGCCCTTaGAAGAGGAAATTGAGACACGCCTCGGGTCATCCT +
Preference number: 6 (lower is better)
Translates to: GVVPLGCGRPCP*KRKLRHASGHP
Trigger: AGGATGACCCGAGGCGTGTCTCAATTTCCTCTTCCAAGGGCATGGACGTCCACAACCAAGAGGAACGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp CAGGGTCAGAAGAAGAATCCTCAGCATCGCCATACATaGATGACAGAGACGGCTCCGTGCTGTCACCCAGGC +
Preference number: 6 (lower is better)
Translates to: QGQKKNPQHRHT*MTETAPCCHPG
Trigger: GCCTGGGTGACAGCACGGAGCCGTCTCTGTCATCCATGTATGGCGATGCTGAGGATTCTTCTTCTGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp TCCACTGAGCTACCAAGAAGAGGTGCCGAGATGGCCTaGCTCACCAGTGTTTTCCGGGGTCGTTCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: STELPRRGAEMA*LTSVFRGRSSW
Trigger: CCAAGAGGAACGACCCCGGAAAACACTGGTGAGCAAGGCCATCTCGGCACCTCTTCTTGGTAGCTCAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp GTGGCCTGGACTCTCGAGTCCAGATCGCATGGATCATaGGCTCTGCCAGTCAGGTTCACTGTCTGTGAGCCA +
Preference number: 6 (lower is better)
Translates to: VAWTLESRSHGS*ALPVRFTVCEP
Trigger: TGGCTCACAGACAGTGAACCTGACTGGCAGAGCCAATGATCCATGCGATCTGGACTCGAGAGTCCAGGCCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp TCAGTCATGGGTTGTTGCCCCAGCTCTGATGCAGCTTaGGGCAGGTTCTCTGTGAGGTGGCTGGCATCCAGA +
Preference number: 6 (lower is better)
Translates to: SVMGCCPSSDAA*GRFSVRWLASR
Trigger: TCTGGATGCCAGCCACCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAACCCATGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp ACATTCCCGTGGGCTAAGCCAGCCAGTGAGGCGCCGTaGACTGACAGAAGGAAATCCCCTCGGTTCATAGTC +
Preference number: 6 (lower is better)
Translates to: TFPWAKPASEAP*TDRRKSPRFIV
Trigger: GACTATGAACCGAGGGGATTTCCTTCTGTCAGTCAACGGCGCCTCACTGGCTGGCTTAGCCCACGGGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp CCCGTGCCAGGCAGTCACTCGATTGGAAGTCCGTCTTCCCACCTTTaGAGAAGCGGCGTTTGTCATTGCTTGTGGTCAGAGGAGCATCTG +
Preference number: 6 (lower is better)
Translates to: PVPGSHSIGSPSSHL*RSGVCHCLWSEEHL
Trigger: CAGATGCTCCTCTGACCACAAGCAATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGGACTTCCAATCGAGTGACTGCCTGGCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp AGGCGAACGGGTCCTGGAGGGCATTTACTCAAGATGGCGTGGACTTaGCTTAAAGCAGCATGGCGGACGTTGACGGAGTTCACTTCCAGG +
Preference number: 6 (lower is better)
Translates to: RRTGPGGHLLKMAWT*LKAAWRTLTEFTSR
Trigger: CCTGGAAGTGAACTCCGTCAACGTCCGCCATGCTGCTTTAAGCAAAGTCCACGCCATCTTGAGTAAATGCCCTCCAGGACCCGTTCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS CAA 90 bp TCCTCTAAGTCCACTGAGCTACCAAGAAGAGGTGCCGAGATGGCCTaGCTCACCAGTGTTTTCCGGGGTCGTTCCTCTTGGTTGTGGACG +
Preference number: 6 (lower is better)
Translates to: SSKSTELPRRGAEMA*LTSVFRGRSSWLWT
Trigger: CGTCCACAACCAAGAGGAACGACCCCGGAAAACACTGGTGAGCAAGGCCATCTCGGCACCTCTTCTTGGTAGCTCAGTGGACTTAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp TTGACAGAAGTGGCCTGGACTCTCGAGTCCAGATCGCATGGATCATaGGCTCTGCCAGTCAGGTTCACTGTCTGTGAGCCACTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: LTEVAWTLESRSHGS*ALPVRFTVCEPLGL
Trigger: CAAGCCCAGTGGCTCACAGACAGTGAACCTGACTGGCAGAGCCAATGATCCATGCGATCTGGACTCGAGAGTCCAGGCCACTTCTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 72 bp TGTAGAAGAGCCAGTCATGGGTTGTTGCCCCAGCTCTaGTGCAGCTTTGGGCAGGTTCTCTGTGAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: CRRASHGLLPQL*CSFGQVLCEVA
Trigger: AGCCACCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAACCCATGACTGGCTCTTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503961.1
CDS GCA 72 bp CTGGCAGATGAGCCTAGGGACACCTACTCGAGACTATaGTGTTTGCCTTGGCAGGAGGAAGCTAGGACCCAA +
Preference number: 6 (lower is better)
Translates to: LADEPRDTYSRL*CLPWQEEARTQ
Trigger: TTGGGTCCTAGCTTCCTCCTGCCAAGGCAAACAGCATAGTCTCGAGTAGGTGTCCCTAGGCTCATCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS GCA 72 bp TTTTCCGGGGTCGTTCCTCTTGGTTGTGGACGTCCATaGCCTTGGAAGAGGAAATTGAGACACGCCTCGGGT +
Preference number: 6 (lower is better)
Translates to: FSGVVPLGCGRP*PWKRKLRHASG
Trigger: ACCCGAGGCGTGTCTCAATTTCCTCTTCCAAGGGCATGGACGTCCACAACCAAGAGGAACGACCCCGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 72 bp AGGTCTGAGGAGCTGTCCAGTTCAGTCATGGGTTGTTaGCCCAGCTCTGATGCAGCTTTGGGCAGGTTCTCT +
Preference number: 6 (lower is better)
Translates to: RSEELSSSVMGC*PSSDAALGRFS
Trigger: AGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAACCCATGACTGAACTGGACAGCTCCTCAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp ATCTGTTCCTCTTCTGACTCCGAAGGATCTTCCTTGTaGAAAGACACACGGGAACGAGGAGGGGACCAGCCG +
Preference number: 6 (lower is better)
Translates to: ICSSSDSEGSSL*KDTRERGGDQP
Trigger: CGGCTGGTCCCCTCCTCGTTCCCGTGTGTCTTTGCACAAGGAAGATCCTTCGGAGTCAGAAGAGGAACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp TTTCTTGATGACCACGAGGGCATCTTTGTGCAGCTGTaGCTGGTGCAGAACCTTCAGGACATTCCCGTGGGC +
Preference number: 6 (lower is better)
Translates to: FLDDHEGIFVQL*LVQNLQDIPVG
Trigger: GCCCACGGGAATGTCCTGAAGGTTCTGCACCAGGCACAGCTGCACAAAGATGCCCTCGTGGTCATCAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp CATTTCACAGCAGGACCCATGCAAATGACACAGGAATaGAGGATCCCTCCAGCAGTGGCCGTGTGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: HFTAGPMQMTQE*RIPPAVAVCPS
Trigger: GGAAGGACACACGGCCACTGCTGGAGGGATCCTCCATTCCTGTGTCATTTGCATGGGTCCTGCTGTGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS CCA 72 bp CGAACGGGTCCTGGAGGGCATTTACTCAAGATGGCGTaGACTTTGCTTAAAGCAGCATGGCGGACGTTGACG +
Preference number: 6 (lower is better)
Translates to: RTGPGGHLLKMA*TLLKAAWRTLT
Trigger: CGTCAACGTCCGCCATGCTGCTTTAAGCAAAGTCCACGCCATCTTGAGTAAATGCCCTCCAGGACCCGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS CCA 72 bp CAAGGCGAACGGGTCCTGGAGGGCATTTACTCAAGATaGCGTGGACTTTGCTTAAAGCAGCATGGCGGACGT +
Preference number: 6 (lower is better)
Translates to: QGERVLEGIYSR*RGLCLKQHGGR
Trigger: ACGTCCGCCATGCTGCTTTAAGCAAAGTCCACGCCATCTTGAGTAAATGCCCTCCAGGACCCGTTCGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS CCA 72 bp GACAGAAGTGGCCTGGACTCTCGAGTCCAGATCGCATaGATCATTGGCTCTGCCAGTCAGGTTCACTGTCTG +
Preference number: 6 (lower is better)
Translates to: DRSGLDSRVQIA*IIGSASQVHCL
Trigger: CAGACAGTGAACCTGACTGGCAGAGCCAATGATCCATGCGATCTGGACTCGAGAGTCCAGGCCACTTCTGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp GATTCCTGTCATTTCCAGAGCCTTACTGTGGTTACCTaGAGCTCCCTGTCTCTGCTCCTGGGATGTGAGGGG +
Preference number: 6 (lower is better)
Translates to: DSCHFQSLTVVT*SSLSLLLGCEG
Trigger: CCCCTCACATCCCAGGAGCAGAGACAGGGAGCTCCAGGTAACCACAGTAAGGCTCTGGAAATGACAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp CCTGGGTGGGAAGATGAGCAGGACTCGAGGGTGGATTaGGGCAGCCACGTGTGGAACAAATCTCAATCTGTT +
Preference number: 6 (lower is better)
Translates to: PGWEDEQDSRVD*GSHVWNKSQSV
Trigger: AACAGATTGAGATTTGTTCCACACGTGGCTGCCCCAATCCACCCTCGAGTCCTGCTCATCTTCCCACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp GCCCTCTGCTCTACACTTAGGAGATTTAGGGGTGGTTaGGCAACCTCTGTCGGGTTCAGAGAGGACAGCCAT +
Preference number: 6 (lower is better)
Translates to: ALCSTLRRFRGG*ATSVGFREDSH
Trigger: ATGGCTGTCCTCTCTGAACCCGACAGAGGTTGCCCAACCACCCCTAAATCTCCTAAGTGTAGAGCAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp CAAGTTCCCCTTGGATTCCTCAGCACCGCACACATCTaGGGGTTCATCTGTCCCAGGCATTGCTCTCTGGAC +
Preference number: 6 (lower is better)
Translates to: QVPLGFLSTAHI*GFICPRHCSLD
Trigger: GTCCAGAGAGCAATGCCTGGGACAGATGAACCCCAAGATGTGTGCGGTGCTGAGGAATCCAAGGGGAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp GGCCTTGCTCACCAGTGTTTTCCGGGGTCGTTCCTCTaGGTTGTGGACGTCCATGCCCTTGGAAGAGGAAAT +
Preference number: 6 (lower is better)
Translates to: GLAHQCFPGSFL*VVDVHALGRGN
Trigger: ATTTCCTCTTCCAAGGGCATGGACGTCCACAACCAAGAGGAACGACCCCGGAAAACACTGGTGAGCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp TGGTTTGTTCTTTCGAGGCGATCGCTGGCCATTATGTaGCCTCCTTTTTCGCCAGTCGGCCTGGGTTGGGCT +
Preference number: 6 (lower is better)
Translates to: WFVLSRRSLAIM*PPFSPVGLGWA
Trigger: AGCCCAACCCAGGCCGACTGGCGAAAAAGGAGGCAACATAATGGCCAGCGATCGCCTCGAAAGAACAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp GGGACTTTCCAAGTTCCCCTTGGATTCCTCAGCACCGCACACATCTaGGGGTTCATCTGTCCCAGGCATTGCTCTCTGGACAGAAGAGCT +
Preference number: 6 (lower is better)
Translates to: GTFQVPLGFLSTAHI*GFICPRHCSLDRRA
Trigger: AGCTCTTCTGTCCAGAGAGCAATGCCTGGGACAGATGAACCCCAAGATGTGTGCGGTGCTGAGGAATCCAAGGGGAACTTGGAAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp CCTTTTCTCTGGAAACGTTCGAAATGCCCAATCATGGGAGGAAGGTaGACTCGTTACAGCACATCCGTGGGGTGGAAGGCCCAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: PFLWKRSKCPIMGGR*TRYSTSVGWKAQQP
Trigger: AGGCTGCTGGGCCTTCCACCCCACGGATGTGCTGTAACGAGTCAACCTTCCTCCCATGATTGGGCATTTCGAACGTTTCCAGAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503961.1
CDS TCA 72 bp ACTGACATCAACTCCAACCATCAGCTGCCCATTCAGTaGGAGGATCTCATCCCGCAGTCGGACCTTCCCACT +
Preference number: 6 (lower is better)
Translates to: TDINSNHQLPIQ*EDLIPQSDLPT
Trigger: AGTGGGAAGGTCCGACTGCGGGATGAGATCCTCTCACTGAATGGGCAGCTGATGGTTGGAGTTGATGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502824.1
CDS TCA 72 bp GCCACTGCTTCCTCGTGGGAGAGCCCGACCAGTAAATaGCCATTGATTACCAGCAGCTCATCTCCTAAGGAC +
Preference number: 6 (lower is better)
Translates to: ATASSWESPTSK*PLITSSSSPKD
Trigger: GTCCTTAGGAGATGAGCTGCTGGTAATCAATGGTCATTTACTGGTCGGGCTCTCCCACGAGGAAGCAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 72 bp ACGGATGGCCGAATGAGCCTCCAAGGAGATTCCACCTaGGTCGTGCTTAAGGAGCGGGTAGACTTCTTCACA +
Preference number: 6 (lower is better)
Translates to: TDGRMSLQGDST*VVLKERVDFFT
Trigger: TGTGAAGAAGTCTACCCGCTCCTTAAGCACGACTCAGGTGGAATCTCCTTGGAGGCTCATTCGGCCATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000509256.1
CDS TCA 72 bp TTTCCCAGAGATTCCTTCTCCACAGCTCCACCTGGCTaGAAGCCAGCGACAGTCACTTTGACAGAAGTGGCC +
Preference number: 6 (lower is better)
Translates to: FPRDSFSTAPPG*KPATVTLTEVA
Trigger: GGCCACTTCTGTCAAAGTGACTGTCGCTGGCTTTCAGCCAGGTGGAGCTGTGGAGAAGGAATCTCTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 72 bp GACTTGTGGATGATTCTGCGACCTGGCGATAGAGCCTaGTTTCACTCTTCTCCTGACAGTTGCCCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: DLWMILRPGDRA*FHSSPDSCPGP
Trigger: TGGCCCAGGGCAACTGTCAGGAGAAGAGTGAAATCAGGCTCTATCGCCAGGTCGCAGAATCATCCACAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp GAATCAGAGCCCTTGCTACTGGTCTCTGGTGGGTTCTaGCGAGAGATGGTCAGTGTCATGATTGAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: ESEPLLLVSGGF*REMVSVMIEGD
Trigger: GTCTCCCTCAATCATGACACTGACCATCTCTCGGCAGAACCCACCAGAGACCAGTAGCAAGGGCTCTGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp TGCTTTATGAGCTGGTCAGGTGAGCGTGCTCTGCTGTaGTTCAGCAGCCTCTGGAATGGGACAGACTCCAAA +
Preference number: 6 (lower is better)
Translates to: CFMSWSGERALL*FSSLWNGTDSK
Trigger: TTTGGAGTCTGTCCCATTCCAGAGGCTGCTGAAGCACAGCAGAGCACGCTCACCTGACCAGCTCATAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513852.1
CDS CCA 72 bp AAGTTCCCCTTGGATTCCTCAGCACCGCACACATCTTaGGGTTCATCTGTCCCAGGCATTGCTCTCTGGACA +
Preference number: 6 (lower is better)
Translates to: KFPLDSSAPHTS*GSSVPGIALWT
Trigger: TGTCCAGAGAGCAATGCCTGGGACAGATGAACCCCAAGATGTGTGCGGTGCTGAGGAATCCAAGGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp GCCTTGCTCACCAGTGTTTTCCGGGGTCGTTCCTCTTaGTTGTGGACGTCCATGCCCTTGGAAGAGGAAATT +
Preference number: 6 (lower is better)
Translates to: ALLTSVFRGRSS*LWTSMPLEEEI
Trigger: AATTTCCTCTTCCAAGGGCATGGACGTCCACAACCAAGAGGAACGACCCCGGAAAACACTGGTGAGCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp GGTGCATGGATTCCTGTCATTTCCAGAGCCTTACTGTaGTTACCTGGAGCTCCCTGTCTCTGCTCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: GAWIPVISRALL*LPGAPCLCSWD
Trigger: ATCCCAGGAGCAGAGACAGGGAGCTCCAGGTAACCACAGTAAGGCTCTGGAAATGACAGGAATCCATGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp GTGGTGTTTCTGTCAGGGTCCTCGTGGTCGGCTACATaGAGCCGCTGTGACACTGCCTTAGAAAGTGTTTTG +
Preference number: 6 (lower is better)
Translates to: VVFLSGSSWSAT*SRCDTALESVL
Trigger: CAAAACACTTTCTAAGGCAGTGTCACAGCGGCTCCATGTAGCCGACCACGAGGACCCTGACAGAAACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp TCTCTACTGTGCAGCTTACTGCACCGGGCCCCCAGCTaGACGCTGTCAGTGTATGGTAAGGAATATAACTGC +
Preference number: 6 (lower is better)
Translates to: SLLCSLLHRAPS*TLSVYGKEYNC
Trigger: GCAGTTATATTCCTTACCATACACTGACAGCGTCCAGCTGGGGGCCCGGTGCAGTAAGCTGCACAGTAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CCA 72 bp TCAGGTGAGCGTGCTCTGCTGTGCTTCAGCAGCCTCTaGAATGGGACAGACTCCAAAGTTGGTTGTGCTTCA +
Preference number: 6 (lower is better)
Translates to: SGERALLCFSSL*NGTDSKVGCAS
Trigger: TGAAGCACAACCAACTTTGGAGTCTGTCCCATTCCAGAGGCTGCTGAAGCACAGCAGAGCACGCTCACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513852.1
CDS CAA 72 bp GGTCCTGGAGGGCATTTACTCAAGATGGCGTGGACTTaGCTTAAAGCAGCATGGCGGACGTTGACGGAGTTC +
Preference number: 6 (lower is better)
Translates to: GPGGHLLKMAWT*LKAAWRTLTEF
Trigger: GAACTCCGTCAACGTCCGCCATGCTGCTTTAAGCAAAGTCCACGCCATCTTGAGTAAATGCCCTCCAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS CAA 72 bp TGGAAACGTTCGAAATGCCCAATCATGGGAGGAAGGTaGACTCGTTACAGCACATCCGTGGGGTGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: WKRSKCPIMGGR*TRYSTSVGWKA
Trigger: GGCCTTCCACCCCACGGATGTGCTGTAACGAGTCAACCTTCCTCCCATGATTGGGCATTTCGAACGTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503961.1
CDS CAA 72 bp CCTCTCCAGGCTTTAGGGGACATCTCAAAAGCCACGTaGTTTACATGTGGCGCTGTACAAAGGGCCCACCTC +
Preference number: 6 (lower is better)
Translates to: PLQALGDISKAT*FTCGAVQRAHL
Trigger: GAGGTGGGCCCTTTGTACAGCGCCACATGTAAACAACGTGGCTTTTGAGATGTCCCCTAAAGCCTGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS CAA 72 bp CCTCCCTTGCCTGCCTACCAGCCAAGGACGTCAGAGTaGACTGCAAAGGCACACTTAGTTAATTGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: PPLPAYQPRTSE*TAKAHLVNWEA
Trigger: TGCCTCCCAATTAACTAAGTGTGCCTTTGCAGTCAACTCTGACGTCCTTGGCTGGTAGGCAGGCAAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 90 bp AGGCTGGCAGATGAGCCTAGGGACACCTACTCGAGACTATGCTGTTaGCCTTGGCAGGAGGAAGCTAGGACCCAATTAGAACAACTGTGG +
Preference number: 6 (lower is better)
Translates to: RLADEPRDTYSRLCC*PWQEEARTQLEQLW
Trigger: CCACAGTTGTTCTAATTGGGTCCTAGCTTCCTCCTGCCAAGGCAAACAGCATAGTCTCGAGTAGGTGTCCCTAGGCTCATCTGCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS CAA 90 bp ACTCTTGGCTCTTTGTTGAGTGTTACTTCCATGACGATCCTGTCCTaGGGCCCAGGGGTCTTCCGACCCAGGGATGAAGAACTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: TLGSLLSVTSMTILS*GPGVFRPRDEELPS
Trigger: TGAAGGCAGTTCTTCATCCCTGGGTCGGAAGACCCCTGGGCCCAAGGACAGGATCGTCATGGAAGTAACACTCAACAAAGAGCCAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp TCTGGGTGTCTGTACGGACTGTGTATTCCAATTTGGGTGCGCTACTaGATCCTGACAGTTCCTTCTTCCACCAGCTTCCAGGGCTCCCCT +
Preference number: 6 (lower is better)
Translates to: SGCLYGLCIPIWVRY*ILTVPSSTSFQGSP
Trigger: AGGGGAGCCCTGGAAGCTGGTGGAAGAAGGAACTGTCAGGATCAAGTAGCGCACCCAAATTGGAATACACAGTCCGTACAGACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp GAACAAATCTCAATCTGTTCCTCTTCTGACTCCGAAGGATCTTCCTaGTGCAAAGACACACGGGAACGAGGAGGGGACCAGCCGTCCCTG +
Preference number: 6 (lower is better)
Translates to: EQISICSSSDSEGSS*CKDTRERGGDQPSL
Trigger: CAGGGACGGCTGGTCCCCTCCTCGTTCCCGTGTGTCTTTGCACAAGGAAGATCCTTCGGAGTCAGAAGAGGAACAGATTGAGATTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp ATTTTCAGCTGGTTTGTTCTTTCGAGGCGATCGCTGGCCATTATGTaGCCTCCTTTTTCGCCAGTCGGCCTGGGTTGGGCTGTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: IFSWFVLSRRSLAIM*PPFSPVGLGWAVSA
Trigger: AGCAGACACAGCCCAACCCAGGCCGACTGGCGAAAAAGGAGGCAACATAATGGCCAGCGATCGCCTCGAAAGAACAAACCAGCTGAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp AGGAAAATGGGTCTATTGCAGTGGCTCGAGTCTGGCTaGATACTGGAGTCACCTGGGAACGTGAAACGGTGT +
Preference number: 6 (lower is better)
Translates to: RKMGLLQWLESG*ILESPGNVKRC
Trigger: ACACCGTTTCACGTTCCCAGGTGACTCCAGTATGCAGCCAGACTCGAGCCACTGCAATAGACCCATTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CCA 72 bp CAGCTTTCCCAGAGATTCCTTCTCCACAGCTCCACCTaGCTGAAAGCCAGCGACAGTCACTTTGACAGAAGT +
Preference number: 6 (lower is better)
Translates to: QLSQRFLLHSST*LKASDSHFDRS
Trigger: ACTTCTGTCAAAGTGACTGTCGCTGGCTTTCAGCCAGGTGGAGCTGTGGAGAAGGAATCTCTGGGAAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp CGATTTTCAGCTGGTTTGTTCTTTCGAGGCGATCGCTaGCCATTATGTTGCCTCCTTTTTCGCCAGTCGGCC +
Preference number: 6 (lower is better)
Translates to: RFSAGLFFRGDR*PLCCLLFRQSA
Trigger: GGCCGACTGGCGAAAAAGGAGGCAACATAATGGCCAGCGATCGCCTCGAAAGAACAAACCAGCTGAAAATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp CAACAGGAAAATGGGTCTATTGCAGTGGCTCGAGTCTaGCTGCATACTGGAGTCACCTGGGAACGTGAAACG +
Preference number: 6 (lower is better)
Translates to: QQENGSIAVARV*LHTGVTWERET
Trigger: CGTTTCACGTTCCCAGGTGACTCCAGTATGCAGCCAGACTCGAGCCACTGCAATAGACCCATTTTCCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 72 bp GGCAGTCACTCGATTGGAAGTCCGTCTTCCCACCTTTaGAGAAGCGGCGTTTGTCATTGCTTGTGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: GSHSIGSPSSHL*RSGVCHCLWSE
Trigger: CTCTGACCACAAGCAATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGGACTTCCAATCGAGTGACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp TCTTTGTTGAGTGTTACTTCCATGACGATCCTGTCCTaGGGCCCAGGGGTCTTCCGACCCAGGGATGAAGAA +
Preference number: 6 (lower is better)
Translates to: SLLSVTSMTILS*GPGVFRPRDEE
Trigger: TTCTTCATCCCTGGGTCGGAAGACCCCTGGGCCCAAGGACAGGATCGTCATGGAAGTAACACTCAACAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp TTGCTCACCAGTGTTTTCCGGGGTCGTTCCTCTTGGTaGTGGACGTCCATGCCCTTGGAAGAGGAAATTGAG +
Preference number: 6 (lower is better)
Translates to: LLTSVFRGRSSW*WTSMPLEEEIE
Trigger: CTCAATTTCCTCTTCCAAGGGCATGGACGTCCACAACCAAGAGGAACGACCCCGGAAAACACTGGTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp TCAATCTGTTCCTCTTCTGACTCCGAAGGATCTTCCTaGTGCAAAGACACACGGGAACGAGGAGGGGACCAG +
Preference number: 6 (lower is better)
Translates to: SICSSSDSEGSS*CKDTRERGGDQ
Trigger: CTGGTCCCCTCCTCGTTCCCGTGTGTCTTTGCACAAGGAAGATCCTTCGGAGTCAGAAGAGGAACAGATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp ACGTGGCTTCCTCTCCAGGCTTTAGGGGACATCTCAAAAGCCACGTaGTTTACATGTGGCGCTGTACAAAGGGCCCACCTCACTTTAACC +
Preference number: 6 (lower is better)
Translates to: TWLPLQALGDISKAT*FTCGAVQRAHLTLT
Trigger: GGTTAAAGTGAGGTGGGCCCTTTGTACAGCGCCACATGTAAACAACGTGGCTTTTGAGATGTCCCCTAAAGCCTGGAGAGGAAGCCACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS CAA 90 bp TTGTACTTCCCTCCCTTGCCTGCCTACCAGCCAAGGACGTCAGAGTaGACTGCAAAGGCACACTTAGTTAATTGGGAGGCAGAGGAAGGA +
Preference number: 6 (lower is better)
Translates to: LYFPPLPAYQPRTSE*TAKAHLVNWEAEEG
Trigger: TCCTTCCTCTGCCTCCCAATTAACTAAGTGTGCCTTTGCAGTCAACTCTGACGTCCTTGGCTGGTAGGCAGGCAAGGGAGGGAAGTACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 90 bp GCTATGGCTGTCTTCACAAACACACTCGCTGCCTCTACTGGCATCTaGCTCCACTGTGAGGAAATGTGTTTCCATGGTGATGCCGGCTCT +
Preference number: 6 (lower is better)
Translates to: AMAVFTNTLAASTGI*LHCEEMCFHGDAGS
Trigger: AGAGCCGGCATCACCATGGAAACACATTTCCTCACAGTGGAGCAAGATGCCAGTAGAGGCAGCGAGTGTGTTTGTGAAGACAGCCATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 90 bp GTGTTCGTCGGACTCTGGGTGTCTGTACGGACTGTGTATTCCAATTaGGGTGCGCTACTTGATCCTGACAGTTCCTTCTTCCACCAGCTT +
Preference number: 6 (lower is better)
Translates to: VFVGLWVSVRTVYSN*GALLDPDSSFFHQL
Trigger: AAGCTGGTGGAAGAAGGAACTGTCAGGATCAAGTAGCGCACCCAAATTGGAATACACAGTCCGTACAGACACCCAGAGTCCGACGAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp GCTGGTTTGAATCAGGATTGTAAACTTGCCTTGTACTTCCCTCCCTaGCCTGCCTACCAGCCAAGGACGTCAGAGTTGACTGCAAAGGCA +
Preference number: 6 (lower is better)
Translates to: AGLNQDCKLALYFPP*PAYQPRTSELTAKA
Trigger: TGCCTTTGCAGTCAACTCTGACGTCCTTGGCTGGTAGGCAGGCAAGGGAGGGAAGTACAAGGCAAGTTTACAATCCTGATTCAAACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS TCA 72 bp TGTGGTTTCTTCTGCACACGAGGGCCTGTGGTTCTGTaGAGTGCTTATGTCCGCATGAGTTTCATGCTCCTG +
Preference number: 6 (lower is better)
Translates to: CGFFCTRGPVVL*SAYVRMSFMLL
Trigger: CAGGAGCATGAAACTCATGCGGACATAAGCACTTCACAGAACCACAGGCCCTCGTGTGCAGAAGAAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 72 bp ACCATGTTGGGGGAGCTGAGAATGATGGGCGGACTGTaGAAATGCCTGGCTACTTTAGACAGCGGACTGTTT +
Preference number: 6 (lower is better)
Translates to: TMLGELRMMGGL*KCLATLDSGLF
Trigger: AAACAGTCCGCTGTCTAAAGTAGCCAGGCATTTTCACAGTCCGCCCATCATTCTCAGCTCCCCCAACATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS TCA 72 bp AATAATCTTACCAGTCATGGGTTGTTGCCCCAGCTCTaGTGCAGCTTTGGGCAGGTTCTCTGTGAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: NNLTSHGLLPQL*CSFGQVLCEVA
Trigger: AGCCACCTCACAGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAACCCATGACTGGTAAGATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502489.5
CDS GCA 72 bp TTTCTTCTGCACACGAGGGCCTGTGGTTCTGTGAAGTaGTTATGTCCGCATGAGTTTCATGCTCCTGAGAGC +
Preference number: 6 (lower is better)
Translates to: FLLHTRACGSVK*LCPHEFHAPES
Trigger: GCTCTCAGGAGCATGAAACTCATGCGGACATAAGCACTTCACAGAACCACAGGCCCTCGTGTGCAGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp AGCTGGACGCTGTCAGTGTATGGTAAGGAATATAACTaGATAGGACCGGGTAGACCTGGGTTAGGGAGACTG +
Preference number: 6 (lower is better)
Translates to: SWTLSVYGKEYN*IGPGRPGLGRL
Trigger: CAGTCTCCCTAACCCAGGTCTACCCGGTCCTATGCAGTTATATTCCTTACCATACACTGACAGCGTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 72 bp GTCACCTGGGAACGTGAAACGGTGTCTGGCCCCCACTaGGGCATTTCTGATTTAATTAAGCTGGGAATTTCC +
Preference number: 6 (lower is better)
Translates to: VTWERETVSGPH*GISDLIKLGIS
Trigger: GGAAATTCCCAGCTTAATTAAATCAGAAATGCCGCAGTGGGGGCCAGACACCGTTTCACGTTCCCAGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 72 bp CTCCCAATTCTGGGGCTGCCCTCCTGGCTGTGTTGCTaGTGTACTTGCATCCTTTGTTCTGTGTTTTCAATG +
Preference number: 6 (lower is better)
Translates to: LPILGLPSWLCC*CTCILCSVFSM
Trigger: CATTGAAAACACAGAACAAAGGATGCAAGTACAGCAGCAACACAGCCAGGAGGGCAGCCCCAGAATTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515115.5
CDS CCA 72 bp CCTAGGGACACCTACTCGAGACTATGCTGTTTGCCTTaGCAGGAGGAAGCTAGGACCCAATTAGAACAACTG +
Preference number: 6 (lower is better)
Translates to: PRDTYSRLCCLP*QEEARTQLEQL
Trigger: CAGTTGTTCTAATTGGGTCCTAGCTTCCTCCTGCCAAGGCAAACAGCATAGTCTCGAGTAGGTGTCCCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS CCA 72 bp TATTGCTGCCCTGTTTGGGACTTTCCAAGTTCCCCTTaGATTCCTCAGCACCGCACACATCTTGGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: YCCPVWDFPSSP*IPQHRTHLGVH
Trigger: ATGAACCCCAAGATGTGTGCGGTGCTGAGGAATCCAAGGGGAACTTGGAAAGTCCCAAACAGGGCAGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp GCCACCATGAAGTCTGACAAGGGGCCAGGGACATCGTaGGCAAAGTACTGGGAGAGTTCAGATTCAGAAATA +
Preference number: 6 (lower is better)
Translates to: ATMKSDKGPGTS*AKYWESSDSEI
Trigger: TATTTCTGAATCTGAACTCTCCCAGTACTTTGCCCACGATGTCCCTGGCCCCTTGTCAGACTTCATGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513184.1
CDS CCA 72 bp GTGATTTCTTTAGTTCCGAATCAGAGCCCTTGCTACTaGTCTCTGGTGGGTTCTGCCGAGAGATGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: VISLVPNQSPCY*SLVGSAERWSV
Trigger: CACTGACCATCTCTCGGCAGAACCCACCAGAGACCAGTAGCAAGGGCTCTGATTCGGAACTAAAGAAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp AATGGCAGCAGCAGATCATCCTCTGGTACCAAGACTTaGCAGCACCAAAATGCCCAGTCTCATGTGAGACTG +
Preference number: 6 (lower is better)
Translates to: NGSSRSSSGTKT*QHQNAQSHVRL
Trigger: CAGTCTCACATGAGACTGGGCATTTTGGTGCTGCCAAGTCTTGGTACCAGAGGATGATCTGCTGCTGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 72 bp GATGAGCCTAGGGACACCTACTCGAGACTATGCTGTTaGCCTTGGCAGGAGGAAGCTAGGACCCAATTAGAA +
Preference number: 6 (lower is better)
Translates to: DEPRDTYSRLCC*PWQEEARTQLE
Trigger: TTCTAATTGGGTCCTAGCTTCCTCCTGCCAAGGCAAACAGCATAGTCTCGAGTAGGTGTCCCTAGGCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS CAA 72 bp TTATTGCTGCCCTGTTTGGGACTTTCCAAGTTCCCCTaGGATTCCTCAGCACCGCACACATCTTGGGGTTCA +
Preference number: 6 (lower is better)
Translates to: LLLPCLGLSKFP*DSSAPHTSWGS
Trigger: TGAACCCCAAGATGTGTGCGGTGCTGAGGAATCCAAGGGGAACTTGGAAAGTCCCAAACAGGGCAGCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp AGGCGGTGTACACCCCCTGAAAGGCGACTCTTGAGCTaGATTTTATTGCTGCCCTGTTTGGGACTTTCCAAG +
Preference number: 6 (lower is better)
Translates to: RRCTPPERRLLS*ILLLPCLGLSK
Trigger: CTTGGAAAGTCCCAAACAGGGCAGCAATAAAATCAAGCTCAAGAGTCGCCTTTCAGGGGGTGTACACCGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp GACTCAAGGCGGTGTACACCCCCTGAAAGGCGACTCTaGAGCTTGATTTTATTGCTGCCCTGTTTGGGACTT +
Preference number: 6 (lower is better)
Translates to: DSRRCTPPERRL*SLILLLPCLGL
Trigger: AAGTCCCAAACAGGGCAGCAATAAAATCAAGCTCAAGAGTCGCCTTTCAGGGGGTGTACACCGCCTTGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp GGAAGTCCGTCTTCCCACCTTTTGAGAAGCGGCGTTTGTCATTGCTaGTGGTCAGAGGAGCATCTGTCTTTGGAATTCTATGCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: GSPSSHLLRSGVCHC*WSEEHLSLEFYALS
Trigger: GGACAGAGCATAGAATTCCAAAGACAGATGCTCCTCTGACCACAAGCAATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGGACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp ATTCCCAAAGGACCAAGTGATTTCTTTAGTTCCGAATCAGAGCCCTaGCTACTGGTCTCTGGTGGGTTCTGCCGAGAGATGGTCAGTGTC +
Preference number: 6 (lower is better)
Translates to: IPKGPSDFFSSESEP*LLVSGGFCREMVSV
Trigger: GACACTGACCATCTCTCGGCAGAACCCACCAGAGACCAGTAGCAAGGGCTCTGATTCGGAACTAAAGAAATCACTTGGTCCTTTGGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp CTCTGCTGTGCTTCAGCAGCCTCTGGAATGGGACAGACTCCAAAGTaGGTTGTGCTTCACTTCCCTTCTCCATTCAGGTCTTTAAAGTCC +
Preference number: 6 (lower is better)
Translates to: LCCASAASGMGQTPK*VVLHFPSPFRSLKS
Trigger: GGACTTTAAAGACCTGAATGGAGAAGGGAAGTGAAGCACAACCAACTTTGGAGTCTGTCCCATTCCAGAGGCTGCTGAAGCACAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513852.1
CDS TCA 72 bp AGCCCATTTATAAATGCAGTCTGCGGGGAAAGGGTATaGAGGGGAGCTGTGACCCTGTTAGGACTACTTTCC +
Preference number: 6 (lower is better)
Translates to: SPFINAVCGERV*RGAVTLLGLLS
Trigger: GGAAAGTAGTCCTAACAGGGTCACAGCTCCCCTTCATACCCTTTCCCCGCAGACTGCATTTATAAATGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS GCA 72 bp CCGTCTTCCCACCTTTTGAGAAGCGGCGTTTGTCATTaGTTGTGGTCAGAGGAGCATCTGTCTTTGGAATTC +
Preference number: 6 (lower is better)
Translates to: PSSHLLRSGVCH*LWSEEHLSLEF
Trigger: GAATTCCAAAGACAGATGCTCCTCTGACCACAAGCAATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 72 bp AGTCCTGGGTTATTAACTATCAACAAAAATACAAGCTaGGCCATGCGTGCTCCAACTTCCTGCCAGCTCCCC +
Preference number: 6 (lower is better)
Translates to: SPGLLTINKNTS*AMRAPTSCQLP
Trigger: GGGGAGCTGGCAGGAAGTTGGAGCACGCATGGCGCAGCTTGTATTTTTGTTGATAGTTAATAACCCAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513852.1
CDS CCA 72 bp TTTAGGGGACATCTCAAAAGCCACGTTGTTTACATGTaGCGCTGTACAAAGGGCCCACCTCACTTTAACCCC +
Preference number: 6 (lower is better)
Translates to: FRGHLKSHVVYM*RCTKGPPHFNP
Trigger: GGGGTTAAAGTGAGGTGGGCCCTTTGTACAGCGCCACATGTAAACAACGTGGCTTTTGAGATGTCCCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS CAA 72 bp TGGAAGTCCGTCTTCCCACCTTTTGAGAAGCGGCGTTaGTCATTGCTTGTGGTCAGAGGAGCATCTGTCTTT +
Preference number: 6 (lower is better)
Translates to: WKSVFPPFEKRR*SLLVVRGASVF
Trigger: AAAGACAGATGCTCCTCTGACCACAAGCAATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGGACTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp CCGTCCTCTGCAGCTGATCCATTTGGGAAGATGGTCTaGACAAAAATCCCCATCTGTCCACGAATGCAGTCT +
Preference number: 6 (lower is better)
Translates to: PSSAADPFGKMV*TKIPICPRMQS
Trigger: AGACTGCATTCGTGGACAGATGGGGATTTTTGTCAAGACCATCTTCCCAAATGGATCAGCTGCAGAGGACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000509256.1
CDS CAA 72 bp GGACTCTGGGTGTCTGTACGGACTGTGTATTCCAATTaGGGTGCGCTACTTGATCCTGACAGTTCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: GLWVSVRTVYSN*GALLDPDSSFF
Trigger: GAAGAAGGAACTGTCAGGATCAAGTAGCGCACCCAAATTGGAATACACAGTCCGTACAGACACCCAGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp AATCAGGATTGTAAACTTGCCTTGTACTTCCCTCCCTaGCCTGCCTACCAGCCAAGGACGTCAGAGTTGACT +
Preference number: 6 (lower is better)
Translates to: NQDCKLALYFPP*PAYQPRTSELT
Trigger: AGTCAACTCTGACGTCCTTGGCTGGTAGGCAGGCAAGGGAGGGAAGTACAAGGCAAGTTTACAATCCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 90 bp AGAAGCGGCGTTTGTCATTGCTTGTGGTCAGAGGAGCATCTGTCTTaGGAATTCTATGCTCTGTCCCTCTGTCCACTTCTGACCTCTCTA +
Preference number: 6 (lower is better)
Translates to: RSGVCHCLWSEEHLS*EFYALSLCPLLTSL
Trigger: TAGAGAGGTCAGAAGTGGACAGAGGGACAGAGCATAGAATTCCAAAGACAGATGCTCCTCTGACCACAAGCAATGACAAACGCCGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp TTAAGTCTTCCGTCCTCTGCAGCTGATCCATTTGGGAAGATGGTCTaGACAAAAATCCCCATCTGTCCACGAATGCAGTCTCGACCTCCA +
Preference number: 6 (lower is better)
Translates to: LSLPSSAADPFGKMV*TKIPICPRMQSRPP
Trigger: TGGAGGTCGAGACTGCATTCGTGGACAGATGGGGATTTTTGTCAAGACCATCTTCCCAAATGGATCAGCTGCAGAGGACGGAAGACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000509256.1
CDS CAA 90 bp GAAGCCAAGCTAGCATTGTCTCCTTTGGACATAAAGGCCAGTCCATaGTCGTGGTTTAAAGAAGGCCACTCCACAGGGTCTGAAGGACAT +
Preference number: 6 (lower is better)
Translates to: EAKLALSPLDIKASP*SWFKEGHSTGSEGH
Trigger: ATGTCCTTCAGACCCTGTGGAGTGGCCTTCTTTAAACCACGACAATGGACTGGCCTTTATGTCCAAAGGAGACAATGCTAGCTTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS TCA 72 bp GAAGTGGTTTCCTTTGACAGTTTACAAGGATCCCACTaGAAGTCCACCAAGTGGTCGAGACAGTTTTGGGGC +
Preference number: 6 (lower is better)
Translates to: EVVSFDSLQGSH*KSTKWSRQFWG
Trigger: GCCCCAAAACTGTCTCGACCACTTGGTGGACTTTCAGTGGGATCCTTGTAAACTGTCAAAGGAAACCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 72 bp TCAATGAGGGAAGGAAGGAAGTGTCTAACAAGTCCCTaGCAGGTTCATTTCACAGCAGGACCCATGCAAATG +
Preference number: 6 (lower is better)
Translates to: SMREGRKCLTSP*QVHFTAGPMQM
Trigger: CATTTGCATGGGTCCTGCTGTGAAATGAACCTGGCAGGGACTTGTTAGACACTTCCTTCCTTCCCTCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502824.1
ENST00000513910.1
CDS GCA 72 bp GGAATTGGCCTCTTTGCTCTCCTGATAAGTGCTGCGTaGTATGACTTCATCCATTTCCTGCTCGGAAACCTT +
Preference number: 6 (lower is better)
Translates to: GIGLFALLISAA*YDFIHFLLGNL
Trigger: AAGGTTTCCGAGCAGGAAATGGATGAAGTCATAGCACGCAGCACTTATCAGGAGAGCAAAGAGGCCAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS GCA 72 bp TCTTCACAAACACACTCGCTGCCTCTACTGGCATCTTaGTCCACTGTGAGGAAATGTGTTTCCATGGTGATG +
Preference number: 6 (lower is better)
Translates to: SSQTHSLPLLAS*STVRKCVSMVM
Trigger: CATCACCATGGAAACACATTTCCTCACAGTGGAGCAAGATGCCAGTAGAGGCAGCGAGTGTGTTTGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 72 bp ATCATCCTCTGGTACCAAGACTTGGCAGCACCAAAATaGCCAGTCTCATGTGAGACTGTTAGAATGGACTCC +
Preference number: 6 (lower is better)
Translates to: IILWYQDLAAPK*PVSCETVRMDS
Trigger: GGAGTCCATTCTAACAGTCTCACATGAGACTGGGCATTTTGGTGCTGCCAAGTCTTGGTACCAGAGGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 72 bp CTGAAGTCACACTTGGGGACTCCAAATTTGATTTTCTaGCAACCCTGGCTGCTAATGGCAGCAGCAGATCAT +
Preference number: 6 (lower is better)
Translates to: LKSHLGTPNLIF*QPWLLMAAADH
Trigger: ATGATCTGCTGCTGCCATTAGCAGCCAGGGTTGGCAGAAAATCAAATTTGGAGTCCCCAAGTGTGACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CCA 72 bp AGTTCGGTCACCCAGCTCCAAGGTAGGTGTTTCTCCTaGTTCAGAGCTGTTGCTACTGTTGCCATTATAAGT +
Preference number: 6 (lower is better)
Translates to: SSVTQLQGRCFS*FRAVATVAIIS
Trigger: ACTTATAATGGCAACAGTAGCAACAGCTCTGAACCAGGAGAAACACCTACCTTGGAGCTGGGTGACCGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000513852.1
CDS CCA 72 bp TTGAACTCACCATCTGAATCTTGGAGTCGGGACTTCTaGCAGGCATTAGAGGTTGTTCCTTCTCGGTTTTGC +
Preference number: 6 (lower is better)
Translates to: LNSPSESWSRDF*QALEVVPSRFC
Trigger: GCAAAACCGAGAAGGAACAACCTCTAATGCCTGCCAGAAGTCCCGACTCCAAGATTCAGATGGTGAGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp AAATTAACTGACCAGCTTCTTCTAAAAGGCAGATCCTaGGCAGCTTCACCCGTATCACTGGCTGAACTGGGT +
Preference number: 6 (lower is better)
Translates to: KLTDQLLLKGRS*AASPVSLAELG
Trigger: ACCCAGTTCAGCCAGTGATACGGGTGAAGCTGCCCAGGATCTGCCTTTTAGAAGAAGCTGGTCAGTTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp TTGTCTCCTTTGGACATAAAGGCCAGTCCATTGTCGTaGTTTAAAGAAGGCCACTCCACAGGGTCTGAAGGA +
Preference number: 6 (lower is better)
Translates to: LSPLDIKASPLS*FKEGHSTGSEG
Trigger: TCCTTCAGACCCTGTGGAGTGGCCTTCTTTAAACCACGACAATGGACTGGCCTTTATGTCCAAAGGAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 72 bp TCCGTCTTCCCACCTTTTGAGAAGCGGCGTTTGTCATaGCTTGTGGTCAGAGGAGCATCTGTCTTTGGAATT +
Preference number: 6 (lower is better)
Translates to: SVFPPFEKRRLS*LVVRGASVFGI
Trigger: AATTCCAAAGACAGATGCTCCTCTGACCACAAGCAATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp AGGCGACTCTTGAGCTTGATTTTATTGCTGCCCTGTTaGGGACTTTCCAAGTTCCCCTTGGATTCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: RRLLSLILLLPC*GLSKFPLDSSA
Trigger: TGCTGAGGAATCCAAGGGGAACTTGGAAAGTCCCAAACAGGGCAGCAATAAAATCAAGCTCAAGAGTCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 72 bp CTGCTTCAGCAGAAATCTCCACGATTTTCAGCTGGTTaGTTCTTTCGAGGCGATCGCTGGCCATTATGTTGC +
Preference number: 6 (lower is better)
Translates to: LLQQKSPRFSAG*FFRGDRWPLCC
Trigger: GCAACATAATGGCCAGCGATCGCCTCGAAAGAACAAACCAGCTGAAAATCGTGGAGATTTCTGCTGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp ACAGGCCGGTCAGCATTGGCCAGGTTCTCAAAAGACTaGATCCGCTGCTTCACAGAGAAAAATGAGGTAGAT +
Preference number: 6 (lower is better)
Translates to: TGRSALARFSKD*IRCFTEKNEVD
Trigger: ATCTACCTCATTTTTCTCTGTGAAGCAGCGGATCAAGTCTTTTGAGAACCTGGCCAATGCTGACCGGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 72 bp CTAGCATTGTCTCCTTTGGACATAAAGGCCAGTCCATaGTCGTGGTTTAAAGAAGGCCACTCCACAGGGTCT +
Preference number: 6 (lower is better)
Translates to: LALSPLDIKASP*SWFKEGHSTGS
Trigger: AGACCCTGTGGAGTGGCCTTCTTTAAACCACGACAATGGACTGGCCTTTATGTCCAAAGGAGACAATGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 72 bp TGTTCACTGTTCACTAGGGCTGAAGCCAAGCTAGCATaGTCTCCTTTGGACATAAAGGCCAGTCCATTGTCG +
Preference number: 6 (lower is better)
Translates to: CSLFTRAEAKLA*SPLDIKASPLS
Trigger: CGACAATGGACTGGCCTTTATGTCCAAAGGAGACAATGCTAGCTTGGCTTCAGCCCTAGTGAACAGTGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 90 bp GATTGGAAGTCCGTCTTCCCACCTTTTGAGAAGCGGCGTTTGTCATaGCTTGTGGTCAGAGGAGCATCTGTCTTTGGAATTCTATGCTCT +
Preference number: 6 (lower is better)
Translates to: DWKSVFPPFEKRRLS*LVVRGASVFGILCS
Trigger: AGAGCATAGAATTCCAAAGACAGATGCTCCTCTGACCACAAGCAATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGGACTTCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp TCACTCGATTGGAAGTCCGTCTTCCCACCTTTTGAGAAGCGGCGTTaGTCATTGCTTGTGGTCAGAGGAGCATCTGTCTTTGGAATTCTA +
Preference number: 6 (lower is better)
Translates to: SLDWKSVFPPFEKRR*SLLVVRGASVFGIL
Trigger: TAGAATTCCAAAGACAGATGCTCCTCTGACCACAAGCAATGACAAACGCCGCTTCTCAAAAGGTGGGAAGACGGACTTCCAATCGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CAA 90 bp TGTTCACTGTTCACTAGGGCTGAAGCCAAGCTAGCATTGTCTCCTTaGGACATAAAGGCCAGTCCATTGTCGTGGTTTAAAGAAGGCCAC +
Preference number: 6 (lower is better)
Translates to: CSLFTRAEAKLALSP*DIKASPLSWFKEGH
Trigger: GTGGCCTTCTTTAAACCACGACAATGGACTGGCCTTTATGTCCAAAGGAGACAATGCTAGCTTGGCTTCAGCCCTAGTGAACAGTGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 90 bp TCTCTGACACTGCTTCAGCAGAAATCTCCACGATTTTCAGCTGGTTaGTTCTTTCGAGGCGATCGCTGGCCATTATGTTGCCTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: SLTLLQQKSPRFSAG*FFRGDRWPLCCLLF
Trigger: AAAAAGGAGGCAACATAATGGCCAGCGATCGCCTCGAAAGAACAAACCAGCTGAAAATCGTGGAGATTTCTGCTGAAGCAGTGTCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp TGCTTCCTCTGTTCACTGTTCACTAGGGCTGAAGCCAAGCTAGCATaGTCTCCTTTGGACATAAAGGCCAGTCCATTGTCGTGGTTTAAA +
Preference number: 6 (lower is better)
Translates to: CFLCSLFTRAEAKLA*SPLDIKASPLSWFK
Trigger: TTTAAACCACGACAATGGACTGGCCTTTATGTCCAAAGGAGACAATGCTAGCTTGGCTTCAGCCCTAGTGAACAGTGAACAGAGGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 90 bp CCCATTAATAGCAAGAATTTCATCTCCAGCTTCTATTATTCCAGCTaGTTCAGCCGCACCACCTCAGCCTTCAGAGTAGCTGCTACCACA +
Preference number: 6 (lower is better)
Translates to: PINSKNFISSFYYSS*FSRTTSAFRVAATT
Trigger: TGTGGTAGCAGCTACTCTGAAGGCTGAGGTGGTGCGGCTGAACAAGCTGGAATAATAGAAGCTGGAGATGAAATTCTTGCTATTAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510285.1
CDS TCA 72 bp TTAAAAGGTCTTCATCTGAGGGAGACGAGGTTACACTaGGGCAGCCTTTGGTTGTCACCTTTCAAGACAACC +
Preference number: 6 (lower is better)
Translates to: LKGLHLRETRLH*GSLWLSPFKTT
Trigger: GGTTGTCTTGAAAGGTGACAACCAAAGGCTGCCTCAGTGTAACCTCGTCTCCCTCAGATGAAGACCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503961.1
CDS GCA 72 bp AGGGACATCCACACTGAAGGAGGACAGACTGGCAGCTaGATTAATGCTTGTTTCGTATTGATTCAGGGTTTC +
Preference number: 6 (lower is better)
Translates to: RDIHTEGGQTGS*INACFVLIQGF
Trigger: GAAACCCTGAATCAATACGAAACAAGCATTAATGCAGCTGCCAGTCTGTCCTCCTTCAGTGTGGATGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp ACAAATGGGAAAATAATCTTACCAGTCATGGGTTGTTaGCCCAGCTCTGATGCAGCTTTGGGCAGGTTCTCT +
Preference number: 6 (lower is better)
Translates to: TNGKIILPVMGC*PSSDAALGRFS
Trigger: AGAGAACCTGCCCAAAGCTGCATCAGAGCTGGGGCAACAACCCATGACTGGTAAGATTATTTTCCCATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502489.5
CDS CCA 72 bp TCCCACCTTTTGAGAAGCGGCGTTTGTCATTGCTTGTaGTCAGAGGAGCATCTGTCTTTGGAATTCTATGCT +
Preference number: 6 (lower is better)
Translates to: SHLLRSGVCHCL*SEEHLSLEFYA
Trigger: AGCATAGAATTCCAAAGACAGATGCTCCTCTGACCACAAGCAATGACAAACGCCGCTTCTCAAAAGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS CCA 72 bp TTTTTCTTTGTACAACCCAATGATCGAGATGACGGATaGCCGAATGAGCCTCCAAGGAGATTCCACCTGAGT +
Preference number: 6 (lower is better)
Translates to: FFFVQPNDRDDG*PNEPPRRFHLS
Trigger: ACTCAGGTGGAATCTCCTTGGAGGCTCATTCGGCCATCCGTCATCTCGATCATTGGGTTGTACAAAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000509256.1
CDS CCA 72 bp ACTTTGATTTTGTCTGTGACTAGGCAGCTCGTCTCCTaGACTGAAATGATATCCCCTTCATCTGTGGCTGGA +
Preference number: 6 (lower is better)
Translates to: TLILSVTRQLVS*TEMISPSSVAG
Trigger: TCCAGCCACAGATGAAGGGGATATCATTTCAGTCCAGGAGACGAGCTGCCTAGTCACAGACAAAATCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp GGTAGCAAGCAAGATCTGGTGGAAACTCGGGCAGGCTaGTTAATGTGGAATGAAGGACATGATGATATCAAG +
Preference number: 6 (lower is better)
Translates to: GSKQDLVETRAG*LMWNEGHDDIK
Trigger: CTTGATATCATCATGTCCTTCATTCCACATTAACCAGCCTGCCCGAGTTTCCACCAGATCTTGCTTGCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS CAA 72 bp GTTTGTCATTGCTTGTGGTCAGAGGAGCATCTGTCTTaGGAATTCTATGCTCTGTCCCTCTGTCCACTTCTG +
Preference number: 6 (lower is better)
Translates to: VCHCLWSEEHLS*EFYALSLCPLL
Trigger: CAGAAGTGGACAGAGGGACAGAGCATAGAATTCCAAAGACAGATGCTCCTCTGACCACAAGCAATGACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438447.2
ENST00000502489.5
CDS TCA 72 bp TTCATCCCCTTCTTTAAGTCTTCCGTCCTCTGCAGCTaGTCCATTTGGGAAGATGGTCTTGACAAAAATCCC +
Preference number: 6 (lower is better)
Translates to: FIPFFKSSVLCS*SIWEDGLDKNP
Trigger: GGGATTTTTGTCAAGACCATCTTCCCAAATGGATCAGCTGCAGAGGACGGAAGACTTAAAGAAGGGGATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438447.2
ENST00000502489.5
ENST00000509256.1
CDS TCA 72 bp GACAGACTGGCAGCTGCATTAATGCTTGTTTCGTATTaGTTCAGGGTTTCGTCATCTAGCAGGTCATGTTCC +
Preference number: 6 (lower is better)
Translates to: DRLAAALMLVSY*FRVSSSSRSCS
Trigger: GGAACATGACCTGCTAGATGACGAAACCCTGAATCAATACGAAACAAGCATTAATGCAGCTGCCAGTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS GCA 72 bp CTTTCAAGACAACCTTTTCTCTGGAAACGTTCGAAATaGCCAATCATGGGAGGAAGGTTGACTCGTTACAGC +
Preference number: 6 (lower is better)
Translates to: LSRQPFLWKRSK*PIMGGRLTRYS
Trigger: GCTGTAACGAGTCAACCTTCCTCCCATGATTGGGCATTTCGAACGTTTCCAGAGAAAAGGTTGTCTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503961.1
CDS CAA 72 bp TTCACTAGGGCTGAAGCCAAGCTAGCATTGTCTCCTTaGGACATAAAGGCCAGTCCATTGTCGTGGTTTAAA +
Preference number: 6 (lower is better)
Translates to: FTRAEAKLALSP*DIKASPLSWFK
Trigger: TTTAAACCACGACAATGGACTGGCCTTTATGTCCAAAGGAGACAATGCTAGCTTGGCTTCAGCCCTAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 90 bp AAGACTGGGGACCATGGAGGCATCTGGACAAGAAGTGTTTCTCATTaGTTAAATGGAATCGGAGCCATTTTCAGCAAGGACTACAAACAG +
Preference number: 6 (lower is better)
Translates to: KTGDHGGIWTRSVSH*LNGIGAIFSKDYKQ
Trigger: CTGTTTGTAGTCCTTGCTGAAAATGGCTCCGATTCCATTTAACAAATGAGAAACACTTCTTGTCCAGATGCCTCCATGGTCCCCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS GCA 72 bp TCTGGGACAGACTTCATAATATTCCAGGCATCAAAGTaGATGAGCCCAACCAGAGGTTTCCCATTAATAGCA +
Preference number: 6 (lower is better)
Translates to: SGTDFIIFQASK*MSPTRGFPLIA
Trigger: TGCTATTAATGGGAAACCTCTGGTTGGGCTCATGCACTTTGATGCCTGGAATATTATGAAGTCTGTCCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397559.3
ENST00000438447.2
ENST00000510285.1
ENST00000513490.1
ENST00000515115.5
CDS GCA 72 bp ACACTTTGCCTTCTGACCATTAGTCAGAAGCATTTCTaGCGGACTCTTCTTAGACAGGTCCTTATTTTCCAG +
Preference number: 6 (lower is better)
Translates to: TLCLLTISQKHF*RTLLRQVLIFQ
Trigger: CTGGAAAATAAGGACCTGTCTAAGAAGAGTCCGGCAGAAATGCTTCTGACTAATGGTCAGAAGGCAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CCA 72 bp GAAAGTGAAATGACACAGAAGGAAGACTGGGGACCATaGAGGCATCTGGACAAGAAGTGTTTCTCATTTGTT +
Preference number: 6 (lower is better)
Translates to: ESEMTQKEDWGP*RHLDKKCFSFV
Trigger: AACAAATGAGAAACACTTCTTGTCCAGATGCCTCCATGGTCCCCAGTCTTCCTTCTGTGTCATTTCACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CAA 72 bp GACCATGGAGGCATCTGGACAAGAAGTGTTTCTCATTaGTTAAATGGAATCGGAGCCATTTTCAGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: DHGGIWTRSVSH*LNGIGAIFSKD
Trigger: GTCCTTGCTGAAAATGGCTCCGATTCCATTTAACAAATGAGAAACACTTCTTGTCCAGATGCCTCCATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513490.1
CDS CCA 72 bp CAAGATCTGGTGGAAACTCGGGCAGGCTGGTTAATGTaGAATGAAGGACATGATGATATCAAGAAAAAGTTG +
Preference number: 6 (lower is better)
Translates to: QDLVETRAGWLM*NEGHDDIKKKL
Trigger: CAACTTTTTCTTGATATCATCATGTCCTTCATTCCACATTAACCAGCCTGCCCGAGTTTCCACCAGATCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502824.1
CDS CAA 72 bp CTTCTGGCAGGCATTAGAGGTTGTTCCTTCTCGGTTTaGCTCCTCAAATGTGTGCCTTGGTTATGTTTATTT +
Preference number: 6 (lower is better)
Translates to: LLAGIRGCSFSV*LLKCVPWLCLF
Trigger: AAATAAACATAACCAAGGCACACATTTGAGGAGCAAAACCGAGAAGGAACAACCTCTAATGCCTGCCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438447.2
CDS CAA 90 bp AAAGTCAGCACACGGCAAGGTCAGAGATTACTCTCATTTGTTCTATaGTGGTATCTGGCAGAAAAATACACTCAGACTTTGAAAATCTTA +
Preference number: 6 (lower is better)
Translates to: KVSTRQGQRLLSFVL*WYLAEKYTQTLKIL
Trigger: TAAGATTTTCAAAGTCTGAGTGTATTTTTCTGCCAGATACCACAATAGAACAAATGAGAGTAATCTCTGACCTTGCCGTGTGCTGACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509256.1