RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDYN (Homo sapiens)

Ensembl gene IDs: ENSG00000101327

Ensembl transcript IDs: ENST00000217305.3, ENST00000539905.5, ENST00000540134.5, ENST00000650824.1, ENST00000650874.1, ENST00000650937.1, ENST00000651328.1, ENST00000651684.1, ENST00000651882.1, ENST00000652436.1

Found 390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACCCAATGCCCAGTGCGTATGTTGGGCCAGATGGCTTGGACTCTTaGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTC +
Preference number: 1 (lower is better)
Translates to: YPMPSAYVGPDGLDS*QPIQLLKNMVVLNF
Trigger: GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATACGCACTGGGCATTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CCA 90 bp AAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTaGTTCCCTGGAATTGAGGAGTCACGTGAACAGGTTGGAAGGACA +
Preference number: 1 (lower is better)
Translates to: KFGHHRPTGTKNTSL*FPGIEESREQVGRT
Trigger: TGTCCTTCCAACCTGTTCACGTGACTCCTCAATTCCAGGGAACCAGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR TCA 90 bp CAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCATCAGCTTaGCTCTGCTTCAGTTCACCATGGAGTAGAAGCATGATACCCATC +
Preference number: 1 (lower is better)
Translates to: QFSCSRTWLCLTSSA*LCFSSPWSRSMIPI
Trigger: GATGGGTATCATGCTTCTACTCCATGGTGAACTGAAGCAGAGTCAAGCTGATGAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR TCA 90 bp ATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGAGGGGCATGTaGTCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAAC +
Preference number: 1 (lower is better)
Translates to: ICMREHAHISSKRGM*SVKFGHHRPTGTKN
Trigger: GTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGCCCCTCTTAGAAGAAATATGAGCATGCTCCCTCATGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR TCA 90 bp AATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATaGAGAGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTC +
Preference number: 1 (lower is better)
Translates to: NLSISEHHQIPGDCA*RDVLSSILYKLSRL
Trigger: GAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CCA 90 bp ATAACTCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTaGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATACAA +
Preference number: 1 (lower is better)
Translates to: ITLKQSIHFRTSSDT*GLRMKRCAQQHLIQ
Trigger: TTGTATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR GCA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATTACCCAATGCCCAGTaGGTATGTTGGGCCAGATGG +
Preference number: 2 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAALPNAQ*VCWARW
Trigger: CCATCTGGCCCAACATACGCACTGGGCATTGGGTAA...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAGATGGCTTGGACTCTTaGCAGCCAATTCAGCTGCTC +
Preference number: 2 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAADGLDS*QPIQLL
Trigger: GAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATC...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATGCACATATAAGAGGATaGATGAATGCACTCCAACCT +
Preference number: 2 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADAHIRG*MNALQP
Trigger: AGGTTGGAGTGCATTCATTCATCCTCTTATATGTGC...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATGAGATAGGCTGGGCTTaGATATTTTGTACACAATGC +
Preference number: 2 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADEIGWA*IFCTQC
Trigger: GCATTGTGTACAAAATATCCAAGCCCAGCCTATCTC...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACCAAGAGGTGCTTTTCTaGACAATGAGGACTCAGAGT +
Preference number: 2 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNQEVLF*TMRTQS
Trigger: ACTCTGAGTCCTCATTGTTCAGAAAAGCACCTCTTG...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCACAAGAGGTGCTTTTCTaGACAATGAGGACTCAGAGT +
Preference number: 2 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAAQEVLF*TMRTQS
Trigger: ACTCTGAGTCCTCATTGTTCAGAAAAGCACCTCTTG...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACTGCTTCAGTTCACCATaGAGTAGAAGCATGATACCC +
Preference number: 2 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNCFSSP*SRSMIP
Trigger: GGGTATCATGCTTCTACTCCATGGTGAACTGAAGCA...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CAA 90 bp ATAGACCTACAGGTACAAAGAACACATCGCTCTGGTTCCCTGGAATaGAGGAGTCACGTGAACAGGTTGGAAGGACAGATCACAAACTGC +
Preference number: 2 (lower is better)
Translates to: IDLQVQRTHRSGSLE*RSHVNRLEGQITNC
Trigger: GCAGTTTGTGATCTGTCCTTCCAACCTGTTCACGTGACTCCTCAATTCCAGGGAACCAGAGCGATGTGTTCTTTGTACCTGTAGGTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCGAATGCACTCCAACCTaGAAAGGTGTCAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFECTPT*KGVRGF
Trigger: GAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTC...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACGCACATATAAGAGGATaGATGAATGCACTCCAACCT +
Preference number: 2 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNAHIRG*MNALQP
Trigger: AGGTTGGAGTGCATTCATTCATCCTCTTATATGTGC...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACGGACTCAGAGTACACTaGCTAAACATTAAACCCACT +
Preference number: 2 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNGLRVH*LNIKPT
Trigger: AGTGGGTTTAATGTTTAGTCAGTGTACTCTGAGTCC...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAACCTGGGGACTGCGCATaGAGAGATGTGCTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKPGDCA*RDVLSS
Trigger: GCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGG...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATCAAGAGGTGCTTTTCTaGACAATGAGGACTCAGAGT +
Preference number: 2 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYQEVLF*TMRTQS
Trigger: ACTCTGAGTCCTCATTGTTCAGAAAAGCACCTCTTG...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR GCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACAAGCATTCAAGAGGCTaGTCTCAATCATTTCCGAAA +
Preference number: 2 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNKHSRG*SQSFPK
Trigger: TTTCGGAAATGATTGAGAGCAGCCTCTTGAATGCTT...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR GCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTGAGTCCCTTACCCAATaGCCAGTGCGTATGTTGGGC +
Preference number: 2 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSESLTQ*PVRMLG
Trigger: GCCCAACATACGCACTGGGCATTGGGTAAGGGACTC...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACAGAAGAGAGATAGGCTaGGCTTGGATATTTTGTACA +
Preference number: 2 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNRREIG*AWIFCT
Trigger: TGTACAAAATATCCAAGCCCAGCCTATCTCTCTTCT...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGAACCCACTAGAAGACTaGACCCTCTACTGTAAGGGT +
Preference number: 2 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRNPLED*TLYCKG
Trigger: ACCCTTACAGTAGAGGGTCCAGTCTTCTAGTGGGTT...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGGGGTACCAACATGACTaGGAGTTCAGGAAGTCAGTT +
Preference number: 2 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRGYQHD*EFRKSV
Trigger: AACTGACTTCCTGAACTCCCAGTCATGTTGGTACCC...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATTCCAGGGTACCAACATaGCTGGGAGTTCAGGAAGTC +
Preference number: 2 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHSRVPT*LGVQEV
Trigger: GACTTCCTGAACTCCCAGTCATGTTGGTACCCTGGA...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGTCCAGGGTACCAACATaGCTGGGAGTTCAGGAAGTC +
Preference number: 2 (lower is better)
Translates to: PWSRSMIPISLISLMRAESRVPT*LGVQEV
Trigger: GACTTCCTGAACTCCCAGTCATGTTGGTACCCTGGA...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR GCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATTTTTCTCTTTCTAGCTaGTGCTTCTGGAGTCCCTTA +
Preference number: 2 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYFSLSS*CFWSPL
Trigger: TAAGGGACTCCAGAAGCAGCAGCTAGAAAGAGAAAA...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGCACTAAGCCTATTGTaGGGAAGGGACATCCACCCT +
Preference number: 2 (lower is better)
Translates to: PWSRSMIPISLISLMRAEALSLL*GRDIHP
Trigger: AGGGTGGATGTCCCTTCCCCACAATAGGCTTAGTGC...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTGATGGCTTGGACTCTTaGCAGCCAATTCAGCTGCTC +
Preference number: 2 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSDGLDS*QPIQLL
Trigger: GAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATC...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTTTGGGCCAGATGGCTTaGACTCTTGGCAGCCAATTC +
Preference number: 2 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSLGQMA*TLGSQF
Trigger: GAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAA...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATTTGGGCCAGATGGCTTaGACTCTTGGCAGCCAATTC +
Preference number: 2 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHLGQMA*TLGSQF
Trigger: GAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAA...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTTCTAGCTGCTGCTTCTaGAGTCCCTTACCCAATGCC +
Preference number: 2 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSSSCCF*SPLPNA
Trigger: GGCATTGGGTAAGGGACTCCAGAAGCAGCAGCTAGA...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCGCACATATAAGAGGATaGATGAATGCACTCCAACCT +
Preference number: 2 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFAHIRG*MNALQP
Trigger: AGGTTGGAGTGCATTCATTCATCCTCTTATATGTGC...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCTCTAAGAGGGGCATGTaGTCTGTTAAGTTTGGACAT +
Preference number: 2 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFSKRGM*SVKFGH
Trigger: ATGTCCAAACTTAACAGATCACATGCCCCTCTTAGA...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCGGACTCAGAGTACACTaGCTAAACATTAAACCCACT +
Preference number: 2 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFGLRVH*LNIKPT
Trigger: AGTGGGTTTAATGTTTAGTCAGTGTACTCTGAGTCC...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR GCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTTCTCTTTCTAGCTGCTaGTTCTGGAGTCCCTTACCC +
Preference number: 2 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSSLSSC*FWSPLP
Trigger: GGGTAAGGGACTCCAGAAGCAGCAGCTAGAAAGAGA...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAGCACTAAGCCTATTGTaGGGAAGGGACATCCACCCT +
Preference number: 2 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKALSLL*GRDIHP
Trigger: AGGGTGGATGTCCCTTCCCCACAATAGGCTTAGTGC...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATAGCTGCTCAAGAACATaGTTGTGCTTAACTTCATCA +
Preference number: 2 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYSCSRT*LCLTSS
Trigger: TGATGAAGTTAAGCACAACCATGTTCTTGAGCAGCT...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAATCTAGCTGCTGCTTCTaGAGTCCCTTACCCAATGCC +
Preference number: 2 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKSSCCF*SPLPNA
Trigger: GGCATTGGGTAAGGGACTCCAGAAGCAGCAGCTAGA...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGTCAGGGGTTTCTCCTaGCTCTACTCCATGAAAAGA +
Preference number: 2 (lower is better)
Translates to: PWSRSMIPISLISLMRAEVRGFS*LYSMKR
Trigger: TCTTTTCATGGAGTAGAGTCAGGAGAAACCCCTGAC...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATGTCAGGGGTTTCTCCTaGCTCTACTCCATGAAAAGA +
Preference number: 2 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHVRGFS*LYSMKR
Trigger: TCTTTTCATGGAGTAGAGTCAGGAGAAACCCCTGAC...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAGAATGCACTCCAACCTaGAAAGGTGTCAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKECTPT*KGVRGF
Trigger: GAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTC...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGTGTATACTATCTGCATaGGGGAGCATGCTCATATTT +
Preference number: 2 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRCILSA*GSMLIF
Trigger: AAATATGAGCATGCTCCCTCATGCAGATAGTATACA...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR GCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAGGCAGCCAATTCAGCTaGTCAAGAACATGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKGSQFS*SRTWLC
Trigger: GCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCC...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGAGAAGAGAGATAGGCTaGGCTTGGATATTTTGTACA +
Preference number: 2 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRRREIG*AWIFCT
Trigger: TGTACAAAATATCCAAGCCCAGCCTATCTCTCTTCT...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTAAGAACACATCGCTCTaGTTCCCTGGAATTGAGGAG +
Preference number: 2 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSKNTSL*FPGIEE
Trigger: CTCCTCAATTCCAGGGAACCAGAGCGATGTGTTCTT...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTGGGTACCAACATGACTaGGAGTTCAGGAAGTCAGTT +
Preference number: 2 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSGYQHD*EFRKSV
Trigger: AACTGACTTCCTGAACTCCCAGTCATGTTGGTACCC...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CAA 90 bp AGCATGCTCATATTTCTTCTAAGAGGGGCATGTGATCTGTTAAGTTaGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: SMLIFLLRGACDLLS*DIIDLQVQRTHRSG
Trigger: ACCAGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGCCCCTCTTAGAAGAAATATGAGCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CAA 90 bp GGAAACCAAGACATCAGGAGGTCTCTGCCTCTGATTCAGGGTTATTaGAATCAAGGGAACTCATTTGGCCTCAAGCACTTAATCATTTTA +
Preference number: 2 (lower is better)
Translates to: GNQDIRRSLPLIQGY*NQGNSFGLKHLIIL
Trigger: TAAAATGATTAAGTGCTTGAGGCCAAATGAGTTCCCTTGATTCAAATAACCCTGAATCAGAGGCAGAGACCTCCTGATGTCTTGGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTGTCAGGGGTTTCTCCTaGCTCTACTCCATGAAAAGA +
Preference number: 2 (lower is better)
Translates to: IPISLISLMRAEGTGPHFVRGFS*LYSMKR
Trigger: TCTTTTCATGGAGTAGAGTCAGGAGAAACCCCTGAC...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTAACCCACTAGAAGACTaGACCCTCTACTGTAAGGGT +
Preference number: 2 (lower is better)
Translates to: IPISLISLMRAEGTGPHFNPLED*TLYCKG
Trigger: ACCCTTACAGTAGAGGGTCCAGTCTTCTAGTGGGTT...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTTCTAAGAGGGGCATGTaGTCTGTTAAGTTTGGACAT +
Preference number: 2 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSSKRGM*SVKFGH
Trigger: ATGTCCAAACTTAACAGATCACATGCCCCTCTTAGA...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGCCTTTCTCCCTCCTTaGTCATTTAAGCATTCAAGA +
Preference number: 2 (lower is better)
Translates to: PWSRSMIPISLISLMRAEAFLPP*SFKHSR
Trigger: TCTTGAATGCTTAAATGATCAAGGAGGGAGAAAGGC...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTTTAACTTCATCAGCTTaGCTCTGCTTCAGTTCACCA +
Preference number: 2 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSLTSSA*LCFSSP
Trigger: TGGTGAACTGAAGCAGAGTCAAGCTGATGAAGTTAA...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR GCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATGATGTGTATACTATCTaGATGAGGGAGCATGCTCAT +
Preference number: 2 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHDVYTI*MREHAH
Trigger: ATGAGCATGCTCCCTCATGCAGATAGTATACACATC...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR GCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGATGTGTATACTATCTaGATGAGGGAGCATGCTCAT +
Preference number: 2 (lower is better)
Translates to: PWSRSMIPISLISLMRAEDVYTI*MREHAH
Trigger: ATGAGCATGCTCCCTCATGCAGATAGTATACACATC...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTGAGATAGGCTGGGCTTaGATATTTTGTACACAATGC +
Preference number: 2 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSEIGWA*IFCTQC
Trigger: GCATTGTGTACAAAATATCCAAGCCCAGCCTATCTC...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTTGTATACTATCTGCATaGGGGAGCATGCTCATATTT +
Preference number: 2 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSCILSA*GSMLIF
Trigger: AAATATGAGCATGCTCCCTCATGCAGATAGTATACA...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAGGACTCAGAGTACACTaGCTAAACATTAAACCCACT +
Preference number: 2 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKGLRVH*LNIKPT
Trigger: AGTGGGTTTAATGTTTAGTCAGTGTACTCTGAGTCC...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTGCCTTTCTCCCTCCTTaGTCATTTAAGCATTCAAGA +
Preference number: 2 (lower is better)
Translates to: IPISLISLMRAEGTGPHFAFLPP*SFKHSR
Trigger: TCTTGAATGCTTAAATGATCAAGGAGGGAGAAAGGC...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTAAGCATTATGGGGATTaGAGAGGGCTTTTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSKHYGD*RGLFLF
Trigger: AAAGAGAAAAAGCCCTCTTCAATCCCCATAATGCTT...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR GCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAGATGTGTATACTATCTaGATGAGGGAGCATGCTCAT +
Preference number: 2 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKDVYTI*MREHAH
Trigger: ATGAGCATGCTCCCTCATGCAGATAGTATACACATC...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR GCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAGCATTCAAGAGGCTaGTCTCAATCATTTCCGAAA +
Preference number: 2 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSKHSRG*SQSFPK
Trigger: TTTCGGAAATGATTGAGAGCAGCCTCTTGAATGCTT...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTGAGATAGGCTGGGCTTaGATATTTTGTACACAATGC +
Preference number: 2 (lower is better)
Translates to: IPISLISLMRAEGTGPHFEIGWA*IFCTQC
Trigger: GCATTGTGTACAAAATATCCAAGCCCAGCCTATCTC...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTAGGAAAGAAGCATTATaGGGATTGAAGAGGGCTTTT +
Preference number: 2 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSRKEAL*GLKRAF
Trigger: AAAAGCCCTCTTCAATCCCCATAATGCTTCTTTCCT...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATAGGAAAGAAGCATTATaGGGATTGAAGAGGGCTTTT +
Preference number: 2 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHRKEAL*GLKRAF
Trigger: AAAAGCCCTCTTCAATCCCCATAATGCTTCTTTCCT...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR TCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAATGTATACTATCTGCATaGGGGAGCATGCTCATATTT +
Preference number: 2 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKCILSA*GSMLIF
Trigger: AAATATGAGCATGCTCCCTCATGCAGATAGTATACA...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAAGCTGCTCAAGAACATaGTTGTGCTTAACTTCATCA +
Preference number: 2 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKSCSRT*LCLTSS
Trigger: TGATGAAGTTAAGCACAACCATGTTCTTGAGCAGCT...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CCA 72 bp GAGTCTAGGTGTCTGAGCCAAGCACTAAGCCTATTGTaGGGAAGGGACATCCACCCTTCCCCATCACAGACC +
Preference number: 3 (lower is better)
Translates to: ESRCLSQALSLL*GRDIHPSPSQT
Trigger: GGTCTGTGATGGGGAAGGGTGGATGTCCCTTCCCCACAATAGGCTTAGTGCTTGGCTCAGACACCTAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CCA 72 bp CCCAGTGCGTATGTTGGGCCAGATGGCTTGGACTCTTaGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTG +
Preference number: 3 (lower is better)
Translates to: PSAYVGPDGLDS*QPIQLLKNMVV
Trigger: CACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATACGCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CCA 72 bp ACCCAATGCCCAGTGCGTATGTTGGGCCAGATGGCTTaGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACA +
Preference number: 3 (lower is better)
Translates to: TQCPVRMLGQMA*TLGSQFSCSRT
Trigger: TGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATACGCACTGGGCATTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTGGTTCCCTGGAATaGAGGAGTCACGTGAACAGG +
Preference number: 3 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAASGSLE*RSHVNR
Trigger: CCTGTTCACGTGACTCCTCAATTCCAGGGAACCAGA...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAAGATGGCTTGGACTCTaGGCAGCCAATTCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAARWLGL*AANSAA
Trigger: AGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCT...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATTGCCCAGTGCGTATGTaGGGCCAGATGGCTTGGACT +
Preference number: 3 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYCPVRM*GQMAWT
Trigger: AGTCCAAGCCATCTGGCCCAACATACGCACTGGGCA...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATGTTGGGCCAGATGGCTaGGACTCTTGGCAGCCAATT +
Preference number: 3 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYVGPDG*DSWQPI
Trigger: AATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAAC...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR GCA 72 bp GGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTaGTCAAGAACATGGTTGTGCTTAACTTCATCAGCT +
Preference number: 3 (lower is better)
Translates to: GQMAWTLGSQFS*SRTWLCLTSSA
Trigger: AGCTGATGAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACCTTAACTTCATCAGCTaGACTCTGCTTCAGTTCACC +
Preference number: 3 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNLNFIS*TLLQFT
Trigger: GGTGAACTGAAGCAGAGTCAAGCTGATGAAGTTAAG...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATCAGACAGGGAGGGCTTaGATGGAAACCAAGACATCA +
Preference number: 3 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYQTGRA*METKTS
Trigger: TGATGTCTTGGTTTCCATCAAAGCCCTCCCTGTCTG...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAAGAGATAGGCTGGGCTaGGATATTTTGTACACAATG +
Preference number: 3 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAARDRLG*DILYTM
Trigger: CATTGTGTACAAAATATCCAAGCCCAGCCTATCTCT...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACACAGAACAAATTGGTTaGCCTTTCTCCCTCCTTGAT +
Preference number: 3 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNTEQIG*PFSLLD
Trigger: ATCAAGGAGGGAGAAAGGCAAACCAATTTGTTCTGT...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACGAACTGGTCCACATTTaGAGTTTGTTGCACAGAACA +
Preference number: 3 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNELVHI*SLLHRT
Trigger: TGTTCTGTGCAACAAACTCAAAATGTGGACCAGTTC...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATGTGATCTGTTAAGTTaGGACATCATAGACCTACAG +
Preference number: 3 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAACDLLS*DIIDLQ
Trigger: CTGTAGGTCTATGATGTCCAAACTTAACAGATCACA...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CCA 72 bp CATCATAGACCTACAGGTACAAAGAACACATCGCTCTaGTTCCCTGGAATTGAGGAGTCACGTGAACAGGTT +
Preference number: 3 (lower is better)
Translates to: HHRPTGTKNTSL*FPGIEESREQV
Trigger: AACCTGTTCACGTGACTCCTCAATTCCAGGGAACCAGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTCAAGCACTAAGCCTATaGTGGGGAAGGGACATCCAC +
Preference number: 3 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSQALSL*WGRDIH
Trigger: GTGGATGTCCCTTCCCCACAATAGGCTTAGTGCTTG...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGCAAGCACTAAGCCTATaGTGGGGAAGGGACATCCAC +
Preference number: 3 (lower is better)
Translates to: PWSRSMIPISLISLMRAEQALSL*WGRDIH
Trigger: GTGGATGTCCCTTCCCCACAATAGGCTTAGTGCTTG...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAGATGGCTTGGACTCTaGGCAGCCAATTCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSRWLGL*AANSAA
Trigger: AGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCT...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATGAAGCATTATGGGGATaGAAGAGGGCTTTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYEALWG*KRAFSL
Trigger: AAGAGAAAAAGCCCTCTTCAATCCCCATAATGCTTC...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCACTGATTCAGGGTTATTaGAATCAAGGGAACTCATTT +
Preference number: 3 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAALIQGY*NQGNSF
Trigger: AAATGAGTTCCCTTGATTCAAATAACCCTGAATCAG...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTCAGACAGGGAGGGCTTaGATGGAAACCAAGACATCA +
Preference number: 3 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSQTGRA*METKTS
Trigger: TGATGTCTTGGTTTCCATCAAAGCCCTCCCTGTCTG...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR TCA 72 bp TGCTCAAGAACATGGTTGTGCTTAACTTCATCAGCTTaGCTCTGCTTCAGTTCACCATGGAGTAGAAGCATG +
Preference number: 3 (lower is better)
Translates to: CSRTWLCLTSSA*LCFSSPWSRSM
Trigger: CATGCTTCTACTCCATGGTGAACTGAAGCAGAGTCAAGCTGATGAAGTTAAGCACAACCATGTTCTTGAGCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CCA 72 bp AAACAATCTATCCATTTCAGAACATCATCAGATACCTaGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: KQSIHFRTSSDT*GLRMKRCAQQH
Trigger: ATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATTGCACAGGAGATCTTTaGAGATTTGGGAATATAATG +
Preference number: 3 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYCTGDL*RFGNIM
Trigger: CATTATATTCCCAAATCTCAAAAGATCTCCTGTGCA...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAACAGACAGGGAGGGCTTaGATGGAAACCAAGACATCA +
Preference number: 3 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKQTGRA*METKTS
Trigger: TGATGTCTTGGTTTCCATCAAAGCCCTCCCTGTCTG...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGAGAGATAGGCTGGGCTaGGATATTTTGTACACAATG +
Preference number: 3 (lower is better)
Translates to: PWSRSMIPISLISLMRAERDRLG*DILYTM
Trigger: CATTGTGTACAAAATATCCAAGCCCAGCCTATCTCT...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTACAGAACAAATTGGTTaGCCTTTCTCCCTCCTTGAT +
Preference number: 3 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSTEQIG*PFSLLD
Trigger: ATCAAGGAGGGAGAAAGGCAAACCAATTTGTTCTGT...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATTGCTCAAGAACATGGTaGTGCTTAACTTCATCAGCT +
Preference number: 3 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHCSRTW*CLTSSA
Trigger: AGCTGATGAAGTTAAGCACAACCATGTTCTTGAGCA...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATTGTGATCTGTTAAGTTaGGACATCATAGACCTACAG +
Preference number: 3 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHCDLLS*DIIDLQ
Trigger: CTGTAGGTCTATGATGTCCAAACTTAACAGATCACA...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTTGTGATCTGTTAAGTTaGGACATCATAGACCTACAG +
Preference number: 3 (lower is better)
Translates to: IPISLISLMRAEGTGPHFCDLLS*DIIDLQ
Trigger: CTGTAGGTCTATGATGTCCAAACTTAACAGATCACA...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR-3UTR CAA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAATGCACAGGAGATCTTTaGAGATTTGGGAATATAATG +
Preference number: 3 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKCTGDL*RFGNIM
Trigger: CATTATATTCCCAAATCTCAAAAGATCTCCTGTGCA...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATCAGCTCCTTCAGGAATaGCCCAGAGAGCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADQLLQE*PRELGQ
Trigger: CTGGCCAAGCTCTCTGGGTCATTCCTGAAGGAGCTG...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATTCTGGTTGTCCCACTTaGGCTTGGGACGAATGCGCC +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADSGCPT*AWDECA
Trigger: GGCGCATTCGTCCCAAGCTCAAGTGGGACAACCAGA...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATACCGAGTCACCACCTTaGACTGGCGCCGGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADTESPP*TGAGEN
Trigger: GTTTTCTCCGGCGCCAGTTCAAGGTGGTGACTCGGT...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAGGTCCTCATGGCCCATaGTATCCCCGTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAAGPHGP*YPRPPP
Trigger: GGGAGGGGGACGGGGATAGCATGGGCCATGAGGACC...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACGGTCCTCATGGCCCATaGTATCCCCGTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNGPHGP*YPRPPP
Trigger: GGGAGGGGGACGGGGATAGCATGGGCCATGAGGACC...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACTCCCTGGGCAGCTTCTaGCCGAGCAGGTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNSLGSF*PSRSEV
Trigger: CACCTCCGACCTGCTCGGCCAGAAGCTGCCCAGGGA...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR CCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATGTCACCACCTTGAACTaGCGCCGGAGAAAACCGCCA +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADVTTLN*RRRKPP
Trigger: TGGCGGTTTTCTCCGGCGCCAGTTCAAGGTGGTGAC...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATGCTCAGGGGCCTCCTTaGCTCCGGCTTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYAQGPP*LRLGRR
Trigger: CCTCCTCCCAAGCCGGAGTCAAGGAGGCCCCTGAGC...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR GCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATCTTCCCCAACCGACTTaGTCCCCAAGTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADLPQPT*SPSPPC
Trigger: ACAAGGAGGACTTGGGGAGCAAGTCGGTTGGGGAAG...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATGATGGCTTGGACTCTTaGCAGCCAATTCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADDGLDS*QPIQLL
Trigger: GAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATC...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACCTGAGCACAGGCTGCTaGGAGCCAATGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNLSTGC*EPMGKW
Trigger: CCACTTCCCCATTGGCTCCCAGCAGCCTGTGCTCAG...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539905.5
CDS-3UTR TCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACCAGCTCCTTCAGGAATaGCCCAGAGAGCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNQLLQE*PRELGQ
Trigger: CTGGCCAAGCTCTCTGGGTCATTCCTGAAGGAGCTG...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTGGTTGTCCCACTTaGGCTTGGGACGAATGCGCC +
Preference number: 4 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAASGCPT*AWDECA
Trigger: GGCGCATTCGTCCCAAGCTCAAGTGGGACAACCAGA...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACTCTGGTTGTCCCACTTaGGCTTGGGACGAATGCGCC +
Preference number: 4 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNSGCPT*AWDECA
Trigger: GGCGCATTCGTCCCAAGCTCAAGTGGGACAACCAGA...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCGGTCCTCATGGCCCATaGTATCCCCGTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFGPHGP*YPRPPP
Trigger: GGGAGGGGGACGGGGATAGCATGGGCCATGAGGACC...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATGGCAGCCAATTCAGCTaGTCAAGAACATGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADGSQFS*SRTWLC
Trigger: GCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCC...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCTCCCTGGGCAGCTTCTaGCCGAGCAGGTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFSLGSF*PSRSEV
Trigger: CACCTCCGACCTGCTCGGCCAGAAGCTGCCCAGGGA...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR CCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATGGTTTGGGACCATCCTaGGTCTTTACAGCACACAAG +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADGLGPS*VFTAHK
Trigger: CTTGTGTGCTGTAAAGACCCAGGATGGTCCCAAACC...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACGTGTGCCAGTCTCCATaGCACCATCGTTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNVCQSP*HHRSAG
Trigger: CCCAGCTGAACGATGGTGCCATGGAGACTGGCACAC...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CAA 72 bp TACCCAATGCCCAGTGCGTATGTTGGGCCAGATGGCTaGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: YPMPSAYVGPDG*DSWQPIQLLKN
Trigger: GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATACGCACTGGGCATTGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATAGCCCCCATAGCGTTTaGCCTGCTCCTTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYSPHSV*PAPWGP
Trigger: AGGACCCCAAGGAGCAGGTCAAACGCTATGGGGGCT...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACGCATTCGGATCTTCCTaGGACCGAGTCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNAFGSS*DRVTTL
Trigger: CAAGGTGGTGACTCGGTCTCAGGAAGATCCGAATGC...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCACCTGGGGACTGCGCATaGAGAGATGTGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPPGDCA*RDVLSS
Trigger: GCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGG...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATACATCATCAGATACCTaGGGACTGCGCATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADTSSDT*GLRMKR
Trigger: TCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGT...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTGCTCAGGGGCCTCCTTaGCTCCGGCTTGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSAQGPP*LRLGRR
Trigger: CCTCCTCCCAAGCCGGAGTCAAGGAGGCCCCTGAGC...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR TCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGAGTCCTCCTTGTCATTaGGCCCAAGGGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRSPPCH*AQGWRG
Trigger: CCCCCTCCACCCTTGGGCTCAATGACAAGGAGGACT...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATCCTGACTCTACTCCATaGAAAGAGGTGCTTATGCAT +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADPDSTP*KEVLMH
Trigger: ATGCATAAGCACCTCTTTTCATGGAGTAGAGTCAGG...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGCCTGGGGACTGCGCATaGAGAGATGTGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRPGDCA*RDVLSS
Trigger: GCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGG...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACTTACCCAATGCCCAGTaGGTATGTTGGGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNLPNAQ*VCWARW
Trigger: CCATCTGGCCCAACATACGCACTGGGCATTGGGTAA...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAATTCCTGCTGCACTCTaGTTTGTCCCTGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAAIPAAL*FVPGQL
Trigger: AAGCTGCCCAGGGACAAAGCAGAGTGCAGCAGGAAT...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539905.5
CDS-3UTR CCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATTCCTTGACTCCGGCTTaGGAGGAGGTGCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYSLTPA*EEVPKR
Trigger: CCTCTTTGGCACCTCCTCCCAAGCCGGAGTCAAGGA...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR CCA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCAGTGTGCCAGTCTCCATaGCACCATCGTTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPVCQSP*HHRSAG
Trigger: CCCAGCTGAACGATGGTGCCATGGAGACTGGCACAC...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCACCAAAGAGGCAGCTGTaGACACCACCAAAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPPKRQL*TPPKPL
Trigger: AAGGGGCTTTGGTGGTGTTCACAGCTGCCTCTTTGG...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR TCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATTCTAAGAGGGGCATGTaGTCTGTTAAGTTTGGACAT +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADSKRGM*SVKFGH
Trigger: ATGTCCAAACTTAACAGATCACATGCCCCTCTTAGA...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATGGACTCAGAGTACACTaGCTAAACATTAAACCCACT +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADGLRVH*LNIKPT
Trigger: AGTGGGTTTAATGTTTAGTCAGTGTACTCTGAGTCC...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATTTAACTTCATCAGCTTaGCTCTGCTTCAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADLTSSA*LCFSSP
Trigger: TGGTGAACTGAAGCAGAGTCAAGCTGATGAAGTTAA...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAAGACAGGGAGGGCTTTaGTGGAAACCAAGACATCAG +
Preference number: 4 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAARQGGL*WKPRHQ
Trigger: CTGATGTCTTGGTTTCCATCAAAGCCCTCCCTGTCT...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCACGAACTCCCTGGGCCTaGCACAATAGGCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPRTPWA*HNRLLF
Trigger: GAAGAGAAGCCTATTGTGTCAGGCCCAGGGAGTTCG...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539905.5
CDS-3UTR GCA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTCTTTCTAGCTGCTaGTTCTGGAGTCCCTTACCC +
Preference number: 4 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAASLSSC*FWSPLP
Trigger: GGGTAAGGGACTCCAGAAGCAGCAGCTAGAAAGAGA...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCAGCACCATCGTTCAGCTaGGCATCCCTCATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPAPSFS*ASLISS
Trigger: TGAGCTGATGAGGGATGCCCAGCTGAACGATGGTGC...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCACCTCTGAGCTCCTCTTaGGGTATTTGCGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAAPLSSS*GICAKS
Trigger: GCTTTTTGCGCAAATACCCCAAGAGGAGCTCAGAGG...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGGTCACCACCTTGAACTaGCGCCGGAGAAAACCGCCA +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRVTTLN*RRRKPP
Trigger: TGGCGGTTTTCTCCGGCGCCAGTTCAAGGTGGTGAC...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGTTCGTGACAGGGATGTaGAGGAGGAAGGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRFVTGM*RRKAAV
Trigger: CACGGCTGCCTTCCTCCTCCACATCCCTGTCACGAA...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539905.5
CDS-3UTR TCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATATAGGCTTCTCTTCGTaGCAGGGATGTGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYIGFSS*QGCGGG
Trigger: TCCTCCTCCACATCCCTGTCACGAAGAGAAGCCTAT...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539905.5
CDS-3UTR GCA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCACAGCGAGATAGAGTGTaGCAGTCTCCATGGCACCAT +
Preference number: 4 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPQRDRV*QSPWHH
Trigger: ATGGTGCCATGGAGACTGGCACACTCTATCTCGCTG...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATCTCCATGAAAAGAGGTaGTTATGCATCAAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADLHEKR*LCIKKL
Trigger: GAGCTTTTTGATGCATAAGCACCTCTTTTCATGGAG...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCATTACCCAATGCCCAGTaGGTATGTTGGGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPLPNAQ*VCWARW
Trigger: CCATCTGGCCCAACATACGCACTGGGCATTGGGTAA...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGGAGTCCCTTACCCAATaGCCAGTGCGTATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRESLTQ*PVRMLG
Trigger: GCCCAACATACGCACTGGGCATTGGGTAAGGGACTC...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCGAGTCCCTTACCCAATaGCCAGTGCGTATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFESLTQ*PVRMLG
Trigger: GCCCAACATACGCACTGGGCATTGGGTAAGGGACTC...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCTTGTACAGGTCCTCATaGCCCATGCTATCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFLYRSS*PMLSPS
Trigger: GGACGGGGATAGCATGGGCCATGAGGACCTGTACAA...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATTTGGGCCAGATGGCTTaGACTCTTGGCAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYLGQMA*TLGSQF
Trigger: GAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAA...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATTCTAGCTGCTGCTTCTaGAGTCCCTTACCCAATGCC +
Preference number: 4 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYSSCCF*SPLPNA
Trigger: GGCATTGGGTAAGGGACTCCAGAAGCAGCAGCTAGA...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CAA 72 bp CAGGTACAAAGAACACATCGCTCTGGTTCCCTGGAATaGAGGAGTCACGTGAACAGGTTGGAAGGACAGATC +
Preference number: 4 (lower is better)
Translates to: QVQRTHRSGSLE*RSHVNRLEGQI
Trigger: GATCTGTCCTTCCAACCTGTTCACGTGACTCCTCAATTCCAGGGAACCAGAGCGATGTGTTCTTTGTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTAGCCCCCATAGCGTTTaGCCTGCTCCTTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSSPHSV*PAPWGP
Trigger: AGGACCCCAAGGAGCAGGTCAAACGCTATGGGGGCT...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATGAATGCACTCCAACCTaGAAAGGTGTCAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYECTPT*KGVRGF
Trigger: GAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTC...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGTCCAGGGTACCAACATaGCTGGGAGTTCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRSRVPT*LGVQEV
Trigger: GACTTCCTGAACTCCCAGTCATGTTGGTACCCTGGA...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGCAATTCCTGCGGCTTaGGCTGCTGCAACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PWSRSMIPISLISLMRAEAIPAA*AAATAP
Trigger: GGGAGCTGTTGCAGCAGCCCAAGCCGCAGGAATTGC...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000540134.5
CDS-3UTR CCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATCCTCTGAGCTCCTCTTaGGGTATTTGCGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYPLSSS*GICAKS
Trigger: GCTTTTTGCGCAAATACCCCAAGAGGAGCTCAGAGG...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCGCACTAAGCCTATTGTaGGGAAGGGACATCCACCCT +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFALSLL*GRDIHP
Trigger: AGGGTGGATGTCCCTTCCCCACAATAGGCTTAGTGC...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCTCTAGCTGCTGCTTCTaGAGTCCCTTACCCAATGCC +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFSSCCF*SPLPNA
Trigger: GGCATTGGGTAAGGGACTCCAGAAGCAGCAGCTAGA...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATTCCAGCCTCATCTCCTaGACCCACAAACCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYSSLIS*THKPKE
Trigger: CTCTTTTGGTTTGTGGGTCCAGGAGATGAGGCTGGA...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTAGTCCTCCTTGTCATTaGGCCCAAGGGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: IPISLISLMRAEGTGPHFSPPCH*AQGWRG
Trigger: CCCCCTCCACCCTTGGGCTCAATGACAAGGAGGACT...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTCAGCTCCTTCAGGAATaGCCCAGAGAGCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSQLLQE*PRELGQ
Trigger: CTGGCCAAGCTCTCTGGGTCATTCCTGAAGGAGCTG...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTCTCCCCAGCCACCTCTaGGCTCCTCTTGGGGTATTT +
Preference number: 4 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSLPSHL*APLGVF
Trigger: AAATACCCCAAGAGGAGCTCAGAGGTGGCTGGGGAG...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTCTCCCCAGCCACCTCTaGGCTCCTCTTGGGGTATTT +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSLPSHL*APLGVF
Trigger: AAATACCCCAAGAGGAGCTCAGAGGTGGCTGGGGAG...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTACCGAGTCACCACCTTaGACTGGCGCCGGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSTESPP*TGAGEN
Trigger: GTTTTCTCCGGCGCCAGTTCAAGGTGGTGACTCGGT...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATACCGAGTCACCACCTTaGACTGGCGCCGGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHTESPP*TGAGEN
Trigger: GTTTTCTCCGGCGCCAGTTCAAGGTGGTGACTCGGT...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACGCCTTTCTCCCTCCTTaGTCATTTAAGCATTCAAGA +
Preference number: 4 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNAFLPP*SFKHSR
Trigger: TCTTGAATGCTTAAATGATCAAGGAGGGAGAAAGGC...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTCCTGGGGACTGCGCATaGAGAGATGTGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IPISLISLMRAEGTGPHFPGDCA*RDVLSS
Trigger: GCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGG...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTAGGGCAGCCTGGCATTaGAGGGAGCAAATCAGGGGA +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSRAAWH*REQIRG
Trigger: TCCCCTGATTTGCTCCCTGCAATGCCAGGCTGCCCT...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGTCTCCTCCAGGCTCTTaGTCAGAGTGTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRSPPGS*SECSPL
Trigger: CAAAGGAGAACACTCTGAGCAAGAGCCTGGAGGAGA...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGTGTGCCAGTCTCCATaGCACCATCGTTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PWSRSMIPISLISLMRAEVCQSP*HHRSAG
Trigger: CCCAGCTGAACGATGGTGCCATGGAGACTGGCACAC...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTGTCACCACCTTGAACTaGCGCCGGAGAAAACCGCCA +
Preference number: 4 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSVTTLN*RRRKPP
Trigger: TGGCGGTTTTCTCCGGCGCCAGTTCAAGGTGGTGAC...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCAGGGTACCAACATGACTaGGAGTTCAGGAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPGYQHD*EFRKSV
Trigger: AACTGACTTCCTGAACTCCCAGTCATGTTGGTACCC...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGCAAAGCCCCTTCAAATaGCAGTTCTGGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRQSPFK*QFWCLF
Trigger: GAAGAGGCACCAGAACTGCCATTTGAAGGGGCTTTG...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539905.5
CDS-3UTR TCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAACTCCCCAGCCACCTCTaGGCTCCTCTTGGGGTATTT +
Preference number: 4 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKLPSHL*APLGVF
Trigger: AAATACCCCAAGAGGAGCTCAGAGGTGGCTGGGGAG...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTGCATTCGGATCTTCCTaGGACCGAGTCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSAFGSS*DRVTTL
Trigger: CAAGGTGGTGACTCGGTCTCAGGAAGATCCGAATGC...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAAAGCATTATGGGGATTaGAGAGGGCTTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAAKHYGD*RGLFLF
Trigger: AAAGAGAAAAAGCCCTCTTCAATCCCCATAATGCTT...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGGCTTGGGAGGAGGTaGCAAAGAGGCAGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHRLGRR*QRGSCE
Trigger: TTCACAGCTGCCTCTTTGGCACCTCCTCCCAAGCCG...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR GCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTTGTCTCAGCAATTCCTaGGGCTTGGGCTGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSCLSNS*GLGCCN
Trigger: GTTGCAGCAGCCCAAGCCGCAGGAATTGCTGAGACA...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000540134.5
CDS-3UTR GCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTTGTCTCAGCAATTCCTaGGGCTTGGGCTGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSCLSNS*GLGCCN
Trigger: GTTGCAGCAGCCCAAGCCGCAGGAATTGCTGAGACA...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000540134.5
CDS-3UTR GCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATCTTCCCCAACCGACTTaGTCCCCAAGTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHLPQPT*SPSPPC
Trigger: ACAAGGAGGACTTGGGGAGCAAGTCGGTTGGGGAAG...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAGAAAAGAGGTGCTTATaGATCAAAAAGCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAAEKRCL*IKKLSR
Trigger: TCTGGAGAGCTTTTTGATGCATAAGCACCTCTTTTC...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATGAGTCCCTTACCCAATaGCCAGTGCGTATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHESLTQ*PVRMLG
Trigger: GCCCAACATACGCACTGGGCATTGGGTAAGGGACTC...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATTCCTTGACTCCGGCTTaGGAGGAGGTGCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHSLTPA*EEVPKR
Trigger: CCTCTTTGGCACCTCCTCCCAAGCCGGAGTCAAGGA...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR CCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTTTGTACAGGTCCTCATaGCCCATGCTATCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSLYRSS*PMLSPS
Trigger: GGACGGGGATAGCATGGGCCATGAGGACCTGTACAA...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCATGCTTCAGTTCACCATaGAGTAGAAGCATGATACCC +
Preference number: 4 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPCFSSP*SRSMIP
Trigger: GGGTATCATGCTTCTACTCCATGGTGAACTGAAGCA...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACTCAAGGGAACTCATTTaGCCTCAAGCACTTAATCAT +
Preference number: 4 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNSRELI*PQALNH
Trigger: ATGATTAAGTGCTTGAGGCCAAATGAGTTCCCTTGA...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCCAAAGAGGCAGCTGTaGACACCACCAAAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHPKRQL*TPPKPL
Trigger: AAGGGGCTTTGGTGGTGTTCACAGCTGCCTCTTTGG...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR TCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCAAGCCTGAAGATAAATaGCCTGCACTCTGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFKPEDK*PALCFV
Trigger: GACAAAGCAGAGTGCAGGTCATTTATCTTCAGGCTT...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217305.3
CDS-3UTR TCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTGCATTCGGATCTTCCTaGGACCGAGTCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: IPISLISLMRAEGTGPHFAFGSS*DRVTTL
Trigger: CAAGGTGGTGACTCGGTCTCAGGAAGATCCGAATGC...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCCCTGACTCTACTCCATaGAAAGAGGTGCTTATGCAT +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFPDSTP*KEVLMH
Trigger: ATGCATAAGCACCTCTTTTCATGGAGTAGAGTCAGG...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATGCACATATAAGAGGATaGATGAATGCACTCCAACCT +
Preference number: 4 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYAHIRG*MNALQP
Trigger: AGGTTGGAGTGCATTCATTCATCCTCTTATATGTGC...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTTCCAGGGTACCAACATaGCTGGGAGTTCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSSRVPT*LGVQEV
Trigger: GACTTCCTGAACTCCCAGTCATGTTGGTACCCTGGA...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTTCCAGGGTACCAACATaGCTGGGAGTTCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSSRVPT*LGVQEV
Trigger: GACTTCCTGAACTCCCAGTCATGTTGGTACCCTGGA...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCATTAACTTCATCAGCTTaGCTCTGCTTCAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPLTSSA*LCFSSP
Trigger: TGGTGAACTGAAGCAGAGTCAAGCTGATGAAGTTAA...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGCGGCTTGGGAGGAGGTaGCAAAGAGGCAGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: VYDVYTICMREHAHISSKRLGRR*QRGSCE
Trigger: TTCACAGCTGCCTCTTTGGCACCTCCTCCCAAGCCG...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR GCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCTTCCCCAACCGACTTaGTCCCCAAGTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHLPQPT*SPSPPC
Trigger: ACAAGGAGGACTTGGGGAGCAAGTCGGTTGGGGAAG...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTCATCAGCTCAGACTCTaGTCCCTCCCTAAACCCGTC +
Preference number: 4 (lower is better)
Translates to: IPISLISLMRAEGTGPHFHQLRL*SLPKPV
Trigger: GACGGGTTTAGGGAGGGAGCAGAGTCTGAGCTGATG...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATCAGCGAGATAGAGTGTaGCAGTCTCCATGGCACCAT +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHQRDRV*QSPWHH
Trigger: ATGGTGCCATGGAGACTGGCACACTCTATCTCGCTG...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTTTACCCAATGCCCAGTaGGTATGTTGGGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSLPNAQ*VCWARW
Trigger: CCATCTGGCCCAACATACGCACTGGGCATTGGGTAA...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTCTCAGCAATTCCTGCTaGACTCTGCTTTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSLSNSC*TLLCPW
Trigger: CCAGGGACAAAGCAGAGTGCAGCAGGAATTGCTGAG...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539905.5
CDS-3UTR CCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATGCACCATCGTTCAGCTaGGCATCCCTCATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHAPSFS*ASLISS
Trigger: TGAGCTGATGAGGGATGCCCAGCTGAACGATGGTGC...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATTTGTACAGGTCCTCATaGCCCATGCTATCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHLYRSS*PMLSPS
Trigger: GGACGGGGATAGCATGGGCCATGAGGACCTGTACAA...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGATGGCTTGGACTCTTaGCAGCCAATTCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PWSRSMIPISLISLMRAEDGLDS*QPIQLL
Trigger: GAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATC...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTTCTAGCTGCTGCTTCTaGAGTCCCTTACCCAATGCC +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSSSCCF*SPLPNA
Trigger: GGCATTGGGTAAGGGACTCCAGAAGCAGCAGCTAGA...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAGAGCCAATGGGGAAGTaGCTGAGAGCAGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKEPMGK*LRAVRA
Trigger: TGCTCTGACTGCTCTCAGCCACTTCCCCATTGGCTC...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539905.5
3UTR CAA 72 bp GACATCAGGAGGTCTCTGCCTCTGATTCAGGGTTATTaGAATCAAGGGAACTCATTTGGCCTCAAGCACTTA +
Preference number: 4 (lower is better)
Translates to: DIRRSLPLIQGY*NQGNSFGLKHL
Trigger: TAAGTGCTTGAGGCCAAATGAGTTCCCTTGATTCAAATAACCCTGAATCAGAGGCAGAGACCTCCTGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTGAATGCACTCCAACCTaGAAAGGTGTCAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSECTPT*KGVRGF
Trigger: GAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTC...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGTCTAAGAGGGGCATGTaGTCTGTTAAGTTTGGACAT +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRSKRGM*SVKFGH
Trigger: ATGTCCAAACTTAACAGATCACATGCCCCTCTTAGA...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCGCCTTTCTCCCTCCTTaGTCATTTAAGCATTCAAGA +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFAFLPP*SFKHSR
Trigger: TCTTGAATGCTTAAATGATCAAGGAGGGAGAAAGGC...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCTTAACTTCATCAGCTTaGCTCTGCTTCAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFLTSSA*LCFSSP
Trigger: TGGTGAACTGAAGCAGAGTCAAGCTGATGAAGTTAA...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATAGACAGGGAGGGCTTTaGTGGAAACCAAGACATCAG +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHRQGGL*WKPRHQ
Trigger: CTGATGTCTTGGTTTCCATCAAAGCCCTCCCTGTCT...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGTCTCCTCCAGGCTCTTaGTCAGAGTGTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PWSRSMIPISLISLMRAESPPGS*SECSPL
Trigger: CAAAGGAGAACACTCTGAGCAAGAGCCTGGAGGAGA...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGCATCAGCTCAGACTCTaGTCCCTCCCTAAACCCGTC +
Preference number: 4 (lower is better)
Translates to: VYDVYTICMREHAHISSKHQLRL*SLPKPV
Trigger: GACGGGTTTAGGGAGGGAGCAGAGTCTGAGCTGATG...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTCAGCGAGATAGAGTGTaGCAGTCTCCATGGCACCAT +
Preference number: 4 (lower is better)
Translates to: IPISLISLMRAEGTGPHFQRDRV*QSPWHH
Trigger: ATGGTGCCATGGAGACTGGCACACTCTATCTCGCTG...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCAGAAAAGAGGTGCTTATaGATCAAAAAGCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPEKRCL*IKKLSR
Trigger: TCTGGAGAGCTTTTTGATGCATAAGCACCTCTTTTC...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGGATGTGTATACTATCTaGATGAGGGAGCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRDVYTI*MREHAH
Trigger: ATGAGCATGCTCCCTCATGCAGATAGTATACACATC...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGCAGAACAAATTGGTTTaGCTTTCTCCCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRQNKLV*LSPSLI
Trigger: GATCAAGGAGGGAGAAAGGCAAACCAATTTGTTCTG...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATTCTCTTTCTAGCTGCTaGTTCTGGAGTCCCTTACCC +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHSLSSC*FWSPLP
Trigger: GGGTAAGGGACTCCAGAAGCAGCAGCTAGAAAGAGA...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTGGTTTGGGACCATCCTaGGTCTTTACAGCACACAAG +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSGLGPS*VFTAHK
Trigger: CTTGTGTGCTGTAAAGACCCAGGATGGTCCCAAACC...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGGCACCATCGTTCAGCTaGGCATCCCTCATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VYDVYTICMREHAHISSKAPSFS*ASLISS
Trigger: TGAGCTGATGAGGGATGCCCAGCTGAACGATGGTGC...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCGAGATAGGCTGGGCTTaGATATTTTGTACACAATGC +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFEIGWA*IFCTQC
Trigger: GCATTGTGTACAAAATATCCAAGCCCAGCCTATCTC...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGGAGATAGGCTGGGCTTaGATATTTTGTACACAATGC +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVREIGWA*IFCTQC
Trigger: GCATTGTGTACAAAATATCCAAGCCCAGCCTATCTC...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTGCACTAAGCCTATTGTaGGGAAGGGACATCCACCCT +
Preference number: 4 (lower is better)
Translates to: IPISLISLMRAEGTGPHFALSLL*GRDIHP
Trigger: AGGGTGGATGTCCCTTCCCCACAATAGGCTTAGTGC...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATGCACTAAGCCTATTGTaGGGAAGGGACATCCACCCT +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHALSLL*GRDIHP
Trigger: AGGGTGGATGTCCCTTCCCCACAATAGGCTTAGTGC...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAGATGGCTTGGACTCTTaGCAGCCAATTCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKDGLDS*QPIQLL
Trigger: GAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATC...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATTTGGGCCAGATGGCTTaGACTCTTGGCAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHLGQMA*TLGSQF
Trigger: GAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAA...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATTCCAGCCTCATCTCCTaGACCCACAAACCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHSSLIS*THKPKE
Trigger: CTCTTTTGGTTTGTGGGTCCAGGAGATGAGGCTGGA...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTTCCAGCCTCATCTCCTaGACCCACAAACCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSSSLIS*THKPKE
Trigger: CTCTTTTGGTTTGTGGGTCCAGGAGATGAGGCTGGA...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCAGTGTTCTCCTTTGTTaGGATACTTGGGAGAAACTT +
Preference number: 4 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFSVLLC*DTWEKL
Trigger: AAGTTTCTCCCAAGTATCTCAACAAAGGAGAACACT...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAAGACAGGGAGGGCTTTaGTGGAAACCAAGACATCAG +
Preference number: 4 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKRQGGL*WKPRHQ
Trigger: CTGATGTCTTGGTTTCCATCAAAGCCCTCCCTGTCT...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGCTCCATGAAAAGAGGTaGTTATGCATCAAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRLHEKR*LCIKKL
Trigger: GAGCTTTTTGATGCATAAGCACCTCTTTTCATGGAG...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTCCTCTGAGCTCCTCTTaGGGTATTTGCGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: IPISLISLMRAEGTGPHFPLSSS*GICAKS
Trigger: GCTTTTTGCGCAAATACCCCAAGAGGAGCTCAGAGG...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTAAGAACACATCGCTCTaGTTCCCTGGAATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSKNTSL*FPGIEE
Trigger: CTCCTCAATTCCAGGGAACCAGAGCGATGTGTTCTT...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTGGGTACCAACATGACTaGGAGTTCAGGAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSGYQHD*EFRKSV
Trigger: AACTGACTTCCTGAACTCCCAGTCATGTTGGTACCC...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGTTGGGCCAGATGGCTTaGACTCTTGGCAGCCAATTC +
Preference number: 4 (lower is better)
Translates to: VYDVYTICMREHAHISSKLGQMA*TLGSQF
Trigger: GAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAA...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGTCAAGGGAACTCATTTaGCCTCAAGCACTTAATCAT +
Preference number: 4 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRSRELI*PQALNH
Trigger: ATGATTAAGTGCTTGAGGCCAAATGAGTTCCCTTGA...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGACATCATCAGATACCTaGGGACTGCGCATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PWSRSMIPISLISLMRAETSSDT*GLRMKR
Trigger: TCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGT...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATACATCATCAGATACCTaGGGACTGCGCATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHTSSDT*GLRMKR
Trigger: TCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGT...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATCCTGACTCTACTCCATaGAAAGAGGTGCTTATGCAT +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHPDSTP*KEVLMH
Trigger: ATGCATAAGCACCTCTTTTCATGGAGTAGAGTCAGG...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAGTCAGGGGTTTCTCCTaGCTCTACTCCATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKVRGFS*LYSMKR
Trigger: TCTTTTCATGGAGTAGAGTCAGGAGAAACCCCTGAC...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATCAAGAGGTGCTTTTCTaGACAATGAGGACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHQEVLF*TMRTQS
Trigger: ACTCTGAGTCCTCATTGTTCAGAAAAGCACCTCTTG...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGCAAGAGGTGCTTTTCTaGACAATGAGGACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PWSRSMIPISLISLMRAEQEVLF*TMRTQS
Trigger: ACTCTGAGTCCTCATTGTTCAGAAAAGCACCTCTTG...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGTCTCCTCCAGGCTCTTaGTCAGAGTGTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: VYDVYTICMREHAHISSKSPPGS*SECSPL
Trigger: CAAAGGAGAACACTCTGAGCAAGAGCCTGGAGGAGA...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGTCTCTTTCTAGCTGCTaGTTCTGGAGTCCCTTACCC +
Preference number: 4 (lower is better)
Translates to: VYDVYTICMREHAHISSKSLSSC*FWSPLP
Trigger: GGGTAAGGGACTCCAGAAGCAGCAGCTAGAAAGAGA...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTGCGCATGAAGAGATGTaGTCAGCAGCATCTTATACA +
Preference number: 4 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSAHEEM*SAASYT
Trigger: TGTATAAGATGCTGCTGAGCACATCTCTTCATGCGC...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGCGCATGAAGAGATGTaGTCAGCAGCATCTTATACA +
Preference number: 4 (lower is better)
Translates to: PWSRSMIPISLISLMRAEAHEEM*SAASYT
Trigger: TGTATAAGATGCTGCTGAGCACATCTCTTCATGCGC...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTGCGCATGAAGAGATGTaGTCAGCAGCATCTTATACA +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSAHEEM*SAASYT
Trigger: TGTATAAGATGCTGCTGAGCACATCTCTTCATGCGC...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGGGTTTGGGACCATCCTaGGTCTTTACAGCACACAAG +
Preference number: 4 (lower is better)
Translates to: VYDVYTICMREHAHISSKGLGPS*VFTAHK
Trigger: CTTGTGTGCTGTAAAGACCCAGGATGGTCCCAAACC...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATAAGAACACATCGCTCTaGTTCCCTGGAATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHKNTSL*FPGIEE
Trigger: CTCCTCAATTCCAGGGAACCAGAGCGATGTGTTCTT...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATAACCCACTAGAAGACTaGACCCTCTACTGTAAGGGT +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHNPLED*TLYCKG
Trigger: ACCCTTACAGTAGAGGGTCCAGTCTTCTAGTGGGTT...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTGGGTACCAACATGACTaGGAGTTCAGGAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: IPISLISLMRAEGTGPHFGYQHD*EFRKSV
Trigger: AACTGACTTCCTGAACTCCCAGTCATGTTGGTACCC...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTGCACATATAAGAGGATaGATGAATGCACTCCAACCT +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSAHIRG*MNALQP
Trigger: AGGTTGGAGTGCATTCATTCATCCTCTTATATGTGC...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTGGACTCAGAGTACACTaGCTAAACATTAAACCCACT +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSGLRVH*LNIKPT
Trigger: AGTGGGTTTAATGTTTAGTCAGTGTACTCTGAGTCC...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTCAGAACAAATTGGTTTaGCTTTCTCCCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSQNKLV*LSPSLI
Trigger: GATCAAGGAGGGAGAAAGGCAAACCAATTTGTTCTG...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTCAGAACAAATTGGTTTaGCTTTCTCCCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSQNKLV*LSPSLI
Trigger: GATCAAGGAGGGAGAAAGGCAAACCAATTTGTTCTG...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAGTGTTCTCCTTTGTTaGGATACTTGGGAGAAACTT +
Preference number: 4 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSSVLLC*DTWEKL
Trigger: AAGTTTCTCCCAAGTATCTCAACAAAGGAGAACACT...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATGCACATATAAGAGGATaGATGAATGCACTCCAACCT +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHAHIRG*MNALQP
Trigger: AGGTTGGAGTGCATTCATTCATCCTCTTATATGTGC...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATTGTATACTATCTGCATaGGGGAGCATGCTCATATTT +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHCILSA*GSMLIF
Trigger: AAATATGAGCATGCTCCCTCATGCAGATAGTATACA...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAGCATTATGGGGATTaGAGAGGGCTTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSKHYGD*RGLFLF
Trigger: AAAGAGAAAAAGCCCTCTTCAATCCCCATAATGCTT...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATAAGCATTATGGGGATTaGAGAGGGCTTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHKHYGD*RGLFLF
Trigger: AAAGAGAAAAAGCCCTCTTCAATCCCCATAATGCTT...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTGAAAAGAGGTGCTTATaGATCAAAAAGCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSEKRCL*IKKLSR
Trigger: TCTGGAGAGCTTTTTGATGCATAAGCACCTCTTTTC...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTAAGCATTCAAGAGGCTaGTCTCAATCATTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSKHSRG*SQSFPK
Trigger: TTTCGGAAATGATTGAGAGCAGCCTCTTGAATGCTT...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTAAGCATTCAAGAGGCTaGTCTCAATCATTTCCGAAA +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSKHSRG*SQSFPK
Trigger: TTTCGGAAATGATTGAGAGCAGCCTCTTGAATGCTT...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAATTTTCTCTTTCTAGCTaGTGCTTCTGGAGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKFSLSS*CFWSPL
Trigger: TAAGGGACTCCAGAAGCAGCAGCTAGAAAGAGAAAA...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGTGCTTCAGTTCACCATaGAGTAGAAGCATGATACCC +
Preference number: 4 (lower is better)
Translates to: VYDVYTICMREHAHISSKCFSSP*SRSMIP
Trigger: GGGTATCATGCTTCTACTCCATGGTGAACTGAAGCA...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTAGCTGCTCAAGAACATaGTTGTGCTTAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSSCSRT*LCLTSS
Trigger: TGATGAAGTTAAGCACAACCATGTTCTTGAGCAGCT...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATAGCTGCTCAAGAACATaGTTGTGCTTAACTTCATCA +
Preference number: 4 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHSCSRT*LCLTSS
Trigger: TGATGAAGTTAAGCACAACCATGTTCTTGAGCAGCT...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGAGGAAAGAAGCATTATaGGGATTGAAGAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: PWSRSMIPISLISLMRAERKEAL*GLKRAF
Trigger: AAAAGCCCTCTTCAATCCCCATAATGCTTCTTTCCT...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATAGTGTTCTCCTTTGTTaGGATACTTGGGAGAAACTT +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHSVLLC*DTWEKL
Trigger: AAGTTTCTCCCAAGTATCTCAACAAAGGAGAACACT...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATTGTATACTATCTGCATaGGGGAGCATGCTCATATTT +
Preference number: 4 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHCILSA*GSMLIF
Trigger: AAATATGAGCATGCTCCCTCATGCAGATAGTATACA...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR TCA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGGCCTTTCTCCCTCCTTaGTCATTTAAGCATTCAAGA +
Preference number: 4 (lower is better)
Translates to: VYDVYTICMREHAHISSKAFLPP*SFKHSR
Trigger: TCTTGAATGCTTAAATGATCAAGGAGGGAGAAAGGC...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR GCA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAACTCCATGAAAAGAGGTaGTTATGCATCAAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKLHEKR*LCIKKL
Trigger: GAGCTTTTTGATGCATAAGCACCTCTTTTCATGGAG...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTAGAAGAGAGATAGGCTaGGCTTGGATATTTTGTACA +
Preference number: 4 (lower is better)
Translates to: IPISLISLMRAEGTGPHFRREIG*AWIFCT
Trigger: TGTACAAAATATCCAAGCCCAGCCTATCTCTCTTCT...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTAGGAAAGAAGCATTATaGGGATTGAAGAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: IPISLISLMRAEGTGPHFRKEAL*GLKRAF
Trigger: AAAAGCCCTCTTCAATCCCCATAATGCTTCTTTCCT...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTTCAAGGGAACTCATTTaGCCTCAAGCACTTAATCAT +
Preference number: 4 (lower is better)
Translates to: IPISLISLMRAEGTGPHFSRELI*PQALNH
Trigger: ATGATTAAGTGCTTGAGGCCAAATGAGTTCCCTTGA...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGAGAAGAGAGATAGGCTaGGCTTGGATATTTTGTACA +
Preference number: 4 (lower is better)
Translates to: VYDVYTICMREHAHISSKRREIG*AWIFCT
Trigger: TGTACAAAATATCCAAGCCCAGCCTATCTCTCTTCT...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CCA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGAGGAAAGAAGCATTATaGGGATTGAAGAGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VYDVYTICMREHAHISSKRKEAL*GLKRAF
Trigger: AAAAGCCCTCTTCAATCCCCATAATGCTTCTTTCCT...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
3UTR CAA 72 bp ATATTTCTTCTAAGAGGGGCATGTGATCTGTTAAGTTaGGACATCATAGACCTACAGGTACAAAGAACACAT +
Preference number: 4 (lower is better)
Translates to: IFLLRGACDLLS*DIIDLQVQRTH
Trigger: ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGCCCCTCTTAGAAGAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS CCA 90 bp ACGAGAGCCTCCCCTGTCGCTCAGCCCTTGCTGAGCACAGGCTGCTaGGAGCCAATGGGGAAGTGGCTGAGAGCAGTCAGAGCACAGACC +
Preference number: 5 (lower is better)
Translates to: TRASPVAQPLLSTGC*EPMGKWLRAVRAQT
Trigger: GGTCTGTGCTCTGACTGCTCTCAGCCACTTCCCCATTGGCTCCCAGCAGCCTGTGCTCAGCAAGGGCTGAGCGACAGGGGAGGCTCTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539905.5
ENST00000651882.1
CDS TCA 90 bp ACTGGCGCCGGAGAAAACCGCCATAGCGCTTCTGGTTGTCCCACTTaGGCTTGGGACGAATGCGCCGCAAGAAGCCCCCATAGCGTTTGT +
Preference number: 5 (lower is better)
Translates to: TGAGENRHSASGCPT*AWDECAARSPHSVC
Trigger: ACAAACGCTATGGGGGCTTCTTGCGGCGCATTCGTCCCAAGCTCAAGTGGGACAACCAGAAGCGCTATGGCGGTTTTCTCCGGCGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS GCA 90 bp CATGGCACCATCGTTCAGCTGGGCATCCCTCATCAGCTCAGACTCTaGTCCCTCCCTAAACCCGTCAGAGAGACCCCTGAGCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: HGTIVQLGIPHQLRL*SLPKPVRETPELLL
Trigger: GAGGAGAAGCTCAGGGGTCTCTCTGACGGGTTTAGGGAGGGAGCAGAGTCTGAGCTGATGAGGGATGCCCAGCTGAACGATGGTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS CCA 90 bp GCTCCTTGGGGTCCTCCTCAGCGAGATAGAGTGTGCCAGTCTCCATaGCACCATCGTTCAGCTGGGCATCCCTCATCAGCTCAGACTCTG +
Preference number: 5 (lower is better)
Translates to: APWGPPQRDRVCQSP*HHRSAGHPSSAQTL
Trigger: CAGAGTCTGAGCTGATGAGGGATGCCCAGCTGAACGATGGTGCCATGGAGACTGGCACACTCTATCTCGCTGAGGAGGACCCCAAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATCGTTTGACCTGCTCCTaGGGGTCCTCCTCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADRLTCS*GSSSAR
Trigger: TCTCGCTGAGGAGGACCCCAAGGAGCAGGTCAAACG...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS TCA 90 bp TCAGAGCACAGACCCCCAGGCCCTTCAACTCGAACTCCCTGGGCCTaGCACAATAGGCTTCTCTTCGTGACAGGGATGTGGAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: SEHRPPGPSTRTPWA*HNRLLFVTGMWRRK
Trigger: CTTCCTCCTCCACATCCCTGTCACGAAGAGAAGCCTATTGTGTCAGGCCCAGGGAGTTCGAGTTGAAGGGCCTGGGGGTCTGTGCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539905.5
ENST00000651882.1
CDS TCA 90 bp CTCCAGAGTAAGCATTCGGATCTTCCTGAGACCGAGTCACCACCTTaGACTGGCGCCGGAGAAAACCGCCATAGCGCTTCTGGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: LQSKHSDLPETESPP*TGAGENRHSASGCP
Trigger: GGGACAACCAGAAGCGCTATGGCGGTTTTCTCCGGCGCCAGTTCAAGGTGGTGACTCGGTCTCAGGAAGATCCGAATGCTTACTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS CCA 90 bp CATTGCAGGGAGCAAATCAGGGGATTGATAGGTTTGGGACCATCCTaGGTCTTTACAGCACACAAGGAGCACCGCGACAGGCAGTCCGCT +
Preference number: 5 (lower is better)
Translates to: HCREQIRGLIGLGPS*VFTAHKEHRDRQSA
Trigger: AGCGGACTGCCTGTCGCGGTGCTCCTTGTGTGCTGTAAAGACCCAGGATGGTCCCAAACCTATCAATCCCCTGATTTGCTCCCTGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
ENST00000650824.1
ENST00000650874.1
ENST00000650937.1
ENST00000651328.1
ENST00000651684.1
ENST00000651882.1
ENST00000652436.1
CDS-3UTR CAA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGGGCTCAGGGGCCTCCTaGACTCCGGCTTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRGSGAS*TPAWEE
Trigger: CTCCTCCCAAGCCGGAGTCAAGGAGGCCCCTGAGCC...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR CAA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATCAAGCACTAAGCCTATaGTGGGGAAGGGACATCCAC +
Preference number: 5 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADQALSL*WGRDIH
Trigger: GTGGATGTCCCTTCCCCACAATAGGCTTAGTGCTTG...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS GCA 90 bp CCCCTGCCAGGCCATCCTGTCTCAGCAATTCCTGCTCAGGGCCTTTaGACTTTCTGTTCTTCTGCCTGCAGTATTTTGACCTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: PLPGHPVSAIPAQGL*TFCSSACSILTSDF
Trigger: GAAGTCTGAGGTCAAAATACTGCAGGCAGAAGAACAGAAAGTGCAAAGGCCCTGAGCAGGAATTGCTGAGACAGGATGGCCTGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651328.1
CDS-3UTR CAA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCACTCCTTGACTCCGGCTaGGGAGGAGGTGCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPLLDSG*GGGAKE
Trigger: CTCTTTGGCACCTCCTCCCAAGCCGGAGTCAAGGAG...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR CAA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATTCTGGTTGTCCCACTaGAGCTTGGGACGAATGCGC +
Preference number: 5 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAAFWLSH*SLGRMR
Trigger: GCGCATTCGTCCCAAGCTCAAGTGGGACAACCAGAA...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCACTCCCCAAGTCCTCCTaGTCATTGAGCCCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPLPKSS*SLSPRV
Trigger: CACCCTTGGGCTCAATGACAAGGAGGACTTGGGGAG...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATTTGTCCCACTTGAGCTaGGGACGAATGCGCCGCAAG +
Preference number: 5 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYLSHLS*GRMRRK
Trigger: CTTGCGGCGCATTCGTCCCAAGCTCAAGTGGGACAA...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATGACCGAGTCACCACCTaGAACTGGCGCCGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYDRVTT*NWRRRK
Trigger: TTTTCTCCGGCGCCAGTTCAAGGTGGTGACTCGGTC...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCATGCCCAGTGCGTATGTaGGGCCAGATGGCTTGGACT +
Preference number: 5 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPCPVRM*GQMAWT
Trigger: AGTCCAAGCCATCTGGCCCAACATACGCACTGGGCA...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATGGCTCAGGGGCCTCCTaGACTCCGGCTTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHGSGAS*TPAWEE
Trigger: CTCCTCCCAAGCCGGAGTCAAGGAGGCCCCTGAGCC...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR CAA 90 bp GGTTGGAAGGACAGATCACAAACTGCTGCTGCTGCTGCTGCTGCCGCTGCTGATGAACTGGTCCACATTTaGAGTTTGTTGCACAGAACA +
Preference number: 5 (lower is better)
Translates to: GWKDRSQTAAAAAAAAADELVHI*SLLHRT
Trigger: TGTTCTGTGCAACAAACTCAAAATGTGGACCAGTTC...ATCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGTTTGTGATCTGTCCTTCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCTGCCCAGTGCGTATGTaGGGCCAGATGGCTTGGACT +
Preference number: 5 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFCPVRM*GQMAWT
Trigger: AGTCCAAGCCATCTGGCCCAACATACGCACTGGGCA...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTCCTGTCGCTCAGCCCTaGCTGAGCACAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSPVAQP*LSTGCW
Trigger: CCAGCAGCCTGTGCTCAGCAAGGGCTGAGCGACAGG...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539905.5
CDS-3UTR CAA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCACAAGCACTAAGCCTATaGTGGGGAAGGGACATCCAC +
Preference number: 5 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPQALSL*WGRDIH
Trigger: GTGGATGTCCCTTCCCCACAATAGGCTTAGTGCTTG...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATAGATGGCTTGGACTCTaGGCAGCCAATTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYRWLGL*AANSAA
Trigger: AGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCT...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATAGCAATTCCTGCGGCTaGGGCTGCTGCAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHSNSCG*GCCNSS
Trigger: GGAGCTGTTGCAGCAGCCCAAGCCGCAGGAATTGCT...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000540134.5
CDS-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATGAGCAAATCAGGGGATaGATAGGTTTGGGACCATCC +
Preference number: 5 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYEQIRG*IGLGPS
Trigger: GGATGGTCCCAAACCTATCAATCCCCTGATTTGCTC...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAATACTTGGGAGAAACTaGCTTTTCTCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAAILGRN*LFSSSF
Trigger: GAAGGAGCTGGAGAAAAGCAAGTTTCTCCCAAGTAT...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGCGTTTGACCTGCTCCTaGGGGTCCTCCTCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: PWSRSMIPISLISLMRAERLTCS*GSSSAR
Trigger: TCTCGCTGAGGAGGACCCCAAGGAGCAGGTCAAACG...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATACCTCTGAGCTCCTCTaGGGGTATTTGCGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYTSELL*GYLRKK
Trigger: CTTTTTGCGCAAATACCCCAAGAGGAGCTCAGAGGT...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGAGATGGCTTGGACTCTaGGCAGCCAATTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRRWLGL*AANSAA
Trigger: AGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCT...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTCTCCTTGACTCCGGCTaGGGAGGAGGTGCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: IPISLISLMRAEGTGPHFLLDSG*GGGAKE
Trigger: CTCTTTGGCACCTCCTCCCAAGCCGGAGTCAAGGAG...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000539905.5
CDS-3UTR CAA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGGAGCAAATCAGGGGATaGATAGGTTTGGGACCATCC +
Preference number: 5 (lower is better)
Translates to: QEAALNHFRKRFSLPSVREQIRG*IGLGPS
Trigger: GGATGGTCCCAAACCTATCAATCCCCTGATTTGCTC...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGCTCCCCAAGTCCTCCTaGTCATTGAGCCCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: PWSRSMIPISLISLMRAELPKSS*SLSPRV
Trigger: CACCCTTGGGCTCAATGACAAGGAGGACTTGGGGAG...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAGAGTGTTCTCCTTTGTaGAGATACTTGGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAAECSPL*RYLGET
Trigger: AGTTTCTCCCAAGTATCTCAACAAAGGAGAACACTC...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCAGAGTGTTCTCCTTaGTTGAGATACTTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAASECSP*LRYLGE
Trigger: TTCTCCCAAGTATCTCAACAAAGGAGAACACTCTGA...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAACGTTTGACCTGCTCCTaGGGGTCCTCCTCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKRLTCS*GSSSAR
Trigger: TCTCGCTGAGGAGGACCCCAAGGAGCAGGTCAAACG...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATTTGTCCCACTTGAGCTaGGGACGAATGCGCCGCAAG +
Preference number: 5 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHLSHLS*GRMRRK
Trigger: CTTGCGGCGCATTCGTCCCAAGCTCAAGTGGGACAA...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTGACCGAGTCACCACCTaGAACTGGCGCCGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSDRVTT*NWRRRK
Trigger: TTTTCTCCGGCGCCAGTTCAAGGTGGTGACTCGGTC...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATTGCCCAGTGCGTATGTaGGGCCAGATGGCTTGGACT +
Preference number: 5 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHCPVRM*GQMAWT
Trigger: AGTCCAAGCCATCTGGCCCAACATACGCACTGGGCA...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CAGAACATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCAGAAGCATTATGGGGATaGAAGAGGGCTTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: QNIIRYLGTAHEEMCSAAEALWG*KRAFSL
Trigger: AAGAGAAAAAGCCCTCTTCAATCCCCATAATGCTTC...TGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGATGTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCCAGACAGGGAGGGCTTaGATGGAAACCAAGACATCA +
Preference number: 5 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFQTGRA*METKTS
Trigger: TGATGTCTTGGTTTCCATCAAAGCCCTCCCTGTCTG...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAACTGCTGCACTCTGCTTaGTCCCTGGGCAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKLLHSA*SLGSFW
Trigger: CCAGAAGCTGCCCAGGGACAAAGCAGAGTGCAGCAG...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539905.5
CDS GCA 90 bp AGTCACTCTGTTCCTCAAATAAGCTTGCTCCTACCTCAGGGCCTTTaGACTTTCTGTTCTTCTGCCTGCAGTATTTTGACCTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: SHSVPQISLLLPQGL*TFCSSACSILTSDF
Trigger: GAAGTCTGAGGTCAAAATACTGCAGGCAGAAGAACAGAAAGTGCAAAGGCCCTGAGGTAGGAGCAAGCTTATTTGAGGAACAGAGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652436.1
CDS-3UTR CAA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAACTCCCCAAGTCCTCCTaGTCATTGAGCCCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKLPKSS*SLSPRV
Trigger: CACCCTTGGGCTCAATGACAAGGAGGACTTGGGGAG...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTTTCTGGTTGTCCCACTaGAGCTTGGGACGAATGCGC +
Preference number: 5 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSFWLSH*SLGRMR
Trigger: GCGCATTCGTCCCAAGCTCAAGTGGGACAACCAGAA...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp TATGTTGGGCCAGATGGCTTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACTGTGATCTGTTAAGTTaGGACATCATAGACCTACAG +
Preference number: 5 (lower is better)
Translates to: YVGPDGLDSWQPIQLLKNCDLLS*DIIDLQ
Trigger: CTGTAGGTCTATGATGTCCAAACTTAACAGATCACA...GTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTGTTGGGCCAGATGGCTaGGACTCTTGGCAGCCAATT +
Preference number: 5 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSVGPDG*DSWQPI
Trigger: AATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAAC...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATGTTGGGCCAGATGGCTaGGACTCTTGGCAGCCAATT +
Preference number: 5 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHVGPDG*DSWQPI
Trigger: AATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAAC...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGTTGTCCCACTTGAGCTaGGGACGAATGCGCCGCAAG +
Preference number: 5 (lower is better)
Translates to: VYDVYTICMREHAHISSKLSHLS*GRMRRK
Trigger: CTTGCGGCGCATTCGTCCCAAGCTCAAGTGGGACAA...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATTTCTGGTTGTCCCACTaGAGCTTGGGACGAATGCGC +
Preference number: 5 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHFWLSH*SLGRMR
Trigger: GCGCATTCGTCCCAAGCTCAAGTGGGACAACCAGAA...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGGACCGAGTCACCACCTaGAACTGGCGCCGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: VYDVYTICMREHAHISSKDRVTT*NWRRRK
Trigger: TTTTCTCCGGCGCCAGTTCAAGGTGGTGACTCGGTC...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATAGAGATAGGCTGGGCTaGGATATTTTGTACACAATG +
Preference number: 5 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYRDRLG*DILYTM
Trigger: CATTGTGTACAAAATATCCAAGCCCAGCCTATCTCT...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTTCTGGTTCCCTGGAATaGAGGAGTCACGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSSGSLE*RSHVNR
Trigger: CCTGTTCACGTGACTCCTCAATTCCAGGGAACCAGA...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCCTTAACTTCATCAGCTaGACTCTGCTTCAGTTCACC +
Preference number: 5 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFLNFIS*TLLQFT
Trigger: GGTGAACTGAAGCAGAGTCAAGCTGATGAAGTTAAG...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCATGCTCAAGAACATGGTaGTGCTTAACTTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPCSRTW*CLTSSA
Trigger: AGCTGATGAAGTTAAGCACAACCATGTTCTTGAGCA...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGAGATGGCTTGGACTCTaGGCAGCCAATTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PWSRSMIPISLISLMRAERWLGL*AANSAA
Trigger: AGCAGCTGAATTGGCTGCCAAGAGTCCAAGCCATCT...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATGTTGGGCCAGATGGCTaGGACTCTTGGCAGCCAATT +
Preference number: 5 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHVGPDG*DSWQPI
Trigger: AATTGGCTGCCAAGAGTCCAAGCCATCTGGCCCAAC...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS GCA 90 bp TCAGCAATTCCTGCTCAGGGCCTTTGCACTTTCTGTTCTTCTGCCTaGAGTATTTTGACCTCAGACTTCTACATCACTAGTTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: SAIPAQGLCTFCSSA*SILTSDFYITSSFF
Trigger: AAAGAAGGAACTAGTGATGTAGAAGTCTGAGGTCAAAATACTGCAGGCAGAAGAACAGAAAGTGCAAAGGCCCTGAGCAGGAATTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651328.1
CDS-3UTR CAA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAGGGGATTGATAGGTTaGGGACCATCCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSRGLIG*GPSWVF
Trigger: AAAGACCCAGGATGGTCCCAAACCTATCAATCCCCT...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATCCTTTGTTGAGATACTaGGGAGAAACTTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYPLLRY*GETCFS
Trigger: AGAAAAGCAAGTTTCTCCCAAGTATCTCAACAAAGG...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGTCAGAGTGTTCTCCTTaGTTGAGATACTTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRSECSP*LRYLGE
Trigger: TTCTCCCAAGTATCTCAACAAAGGAGAACACTCTGA...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGACCTCTGAGCTCCTCTaGGGGTATTTGCGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: PWSRSMIPISLISLMRAETSELL*GYLRKK
Trigger: CTTTTTGCGCAAATACCCCAAGAGGAGCTCAGAGGT...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTCAAGCACTAAGCCTATaGTGGGGAAGGGACATCCAC +
Preference number: 5 (lower is better)
Translates to: IPISLISLMRAEGTGPHFQALSL*WGRDIH
Trigger: GTGGATGTCCCTTCCCCACAATAGGCTTAGTGCTTG...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTTCTGGTTCCCTGGAATaGAGGAGTCACGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: IPISLISLMRAEGTGPHFSGSLE*RSHVNR
Trigger: CCTGTTCACGTGACTCCTCAATTCCAGGGAACCAGA...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATGAATGCACTCCAACCTGAAAAGGTGTCAGGGGTTTCTCCTGACTCTACTCCATGTGATCTGTTAAGTTaGGACATCATAGACCTACAG +
Preference number: 5 (lower is better)
Translates to: MNALQPEKVSGVSPDSTPCDLLS*DIIDLQ
Trigger: CTGTAGGTCTATGATGTCCAAACTTAACAGATCACA...TGGAGTAGAGTCAGGAGAAACCCCTGACACCTTTTCAGGTTGGAGTGCATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGGAACTGGTCCACATTTaGAGTTTGTTGCACAGAACA +
Preference number: 5 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRELVHI*SLLHRT
Trigger: TGTTCTGTGCAACAAACTCAAAATGTGGACCAGTTC...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS TCA 90 bp CTATGCGAGTCTTCAGGATTTGGTTCCACGTCTTGTCTTTTTCTCTaGAATAGTCACTCTGTTCCTCAAATAAGCTTGCTCCTACCTCAG +
Preference number: 5 (lower is better)
Translates to: LCESSGFGSTSCLFL*NSHSVPQISLLLPQ
Trigger: CTGAGGTAGGAGCAAGCTTATTTGAGGAACAGAGTGACTATTTCAGAGAAAAAGACAAGACGTGGAACCAAATCCTGAAGACTCGCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652436.1
CDS-3UTR CAA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATAGGGGATTGATAGGTTaGGGACCATCCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHRGLIG*GPSWVF
Trigger: AAAGACCCAGGATGGTCCCAAACCTATCAATCCCCT...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTAGGGGATTGATAGGTTaGGGACCATCCTGGGTCTTT +
Preference number: 5 (lower is better)
Translates to: IPISLISLMRAEGTGPHFRGLIG*GPSWVF
Trigger: AAAGACCCAGGATGGTCCCAAACCTATCAATCCCCT...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAGAGCAAATCAGGGGATaGATAGGTTTGGGACCATCC +
Preference number: 5 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKEQIRG*IGLGPS
Trigger: GGATGGTCCCAAACCTATCAATCCCCTGATTTGCTC...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GCATGTGATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATACCTCTGAGCTCCTCTaGGGGTATTTGCGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: ACDLLSLDIIDLQVQRTHTSELL*GYLRKK
Trigger: CTTTTTGCGCAAATACCCCAAGAGGAGCTCAGAGGT...ATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATCACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATCATCAGATACCTGGGGACTGCGCATGAAGAGATGTGCTCAGCAGCATCTTATCTGATTCAGGGTTATTaGAATCAAGGGAACTCATTT +
Preference number: 5 (lower is better)
Translates to: IIRYLGTAHEEMCSAASYLIQGY*NQGNSF
Trigger: AAATGAGTTCCCTTGATTCAAATAACCCTGAATCAG...ATAAGATGCTGCTGAGCACATCTCTTCATGCGCAGTCCCCAGGTATCTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTCAGACAGGGAGGGCTTaGATGGAAACCAAGACATCA +
Preference number: 5 (lower is better)
Translates to: IPISLISLMRAEGTGPHFQTGRA*METKTS
Trigger: TGATGTCTTGGTTTCCATCAAAGCCCTCCCTGTCTG...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS TCA 90 bp CTGCTCAGGGCCTTTGCACTTTCTGTTCTTCTGCCTGCAGTATTTTaGCCTCAGACTTCTACATCACTAGTTCCTTCTTTGTCATTAAAT +
Preference number: 5 (lower is better)
Translates to: LLRAFALSVLLPAVF*PQTSTSLVPSLSLN
Trigger: ATTTAATGACAAAGAAGGAACTAGTGATGTAGAAGTCTGAGGTCAAAATACTGCAGGCAGAAGAACAGAAAGTGCAAAGGCCCTGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651328.1
CDS-3UTR CAA 90 bp ACTGGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTATACTTGGGAGAAACTaGCTTTTCTCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TGGAGNYTSLLKAKQIPSILGRN*LFSSSF
Trigger: GAAGGAGCTGGAGAAAAGCAAGTTTCTCCCAAGTAT...ACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTATACTTGGGAGAAACTaGCTTTTCTCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSILGRN*LFSSSF
Trigger: GAAGGAGCTGGAGAAAAGCAAGTTTCTCCCAAGTAT...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CAAGAGGCTGCTCTCAATCATTTCCGAAAGAGGTTTTCACTCCCTTCTGTAAGGTGCACAGGAGATCTTTaGAGATTTGGGAATATAATG +
Preference number: 5 (lower is better)
Translates to: QEAALNHFRKRFSLPSVRCTGDL*RFGNIM
Trigger: CATTATATTCCCAAATCTCAAAAGATCTCCTGTGCA...CCTTACAGAAGGGAGTGAAAACCTCTTTCGGAAATGATTGAGAGCAGCCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCTGCACAGGAGATCTTTaGAGATTTGGGAATATAATG +
Preference number: 5 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFCTGDL*RFGNIM
Trigger: CATTATATTCCCAAATCTCAAAAGATCTCCTGTGCA...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGCTTAACTTCATCAGCTaGACTCTGCTTCAGTTCACC +
Preference number: 5 (lower is better)
Translates to: PWSRSMIPISLISLMRAELNFIS*TLLQFT
Trigger: GGTGAACTGAAGCAGAGTCAAGCTGATGAAGTTAAG...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp TTGGACTCTTGGCAGCCAATTCAGCTGCTCAAGAACATGGTTGTGCTTAACTTCCTGATTCAGGGTTATTaGAATCAAGGGAACTCATTT +
Preference number: 5 (lower is better)
Translates to: LDSWQPIQLLKNMVVLNFLIQGY*NQGNSF
Trigger: AAATGAGTTCCCTTGATTCAAATAACCCTGAATCAG...GAAGTTAAGCACAACCATGTTCTTGAGCAGCTGAATTGGCTGCCAAGAGTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTTCAGAGTGTTCTCCTTaGTTGAGATACTTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSSECSP*LRYLGE
Trigger: TTCTCCCAAGTATCTCAACAAAGGAGAACACTCTGA...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp AGATGTGCTCAGCAGCATCTTATACAAATTATCCAGACTCAAGCCTTTTCCTCTAGAGATAGGCTGGGCTaGGATATTTTGTACACAATG +
Preference number: 5 (lower is better)
Translates to: RCAQQHLIQIIQTQAFSSRDRLG*DILYTM
Trigger: CATTGTGTACAAAATATCCAAGCCCAGCCTATCTCT...AGAGGAAAAGGCTTGAGTCTGGATAATTTGTATAAGATGCTGCTGAGCACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTAGAGATAGGCTGGGCTaGGATATTTTGTACACAATG +
Preference number: 5 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSRDRLG*DILYTM
Trigger: CATTGTGTACAAAATATCCAAGCCCAGCCTATCTCT...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp TCTAAAACAATCTATCCATTTCAGAACATCATCAGATACCTGGGGACTGCGCATGAACTGGTCCACATTTaGAGTTTGTTGCACAGAACA +
Preference number: 5 (lower is better)
Translates to: SKTIYPFQNIIRYLGTAHELVHI*SLLHRT
Trigger: TGTTCTGTGCAACAAACTCAAAATGTGGACCAGTTC...ATGCGCAGTCCCCAGGTATCTGATGATGTTCTGAAATGGATAGATTGTTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTTGCTCAAGAACATGGTaGTGCTTAACTTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSCSRTW*CLTSSA
Trigger: AGCTGATGAAGTTAAGCACAACCATGTTCTTGAGCA...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTGAAGCATTATGGGGATaGAAGAGGGCTTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSEALWG*KRAFSL
Trigger: AAGAGAAAAAGCCCTCTTCAATCCCCATAATGCTTC...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp CCATGGAGTAGAAGCATGATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGCCTTTGTTGAGATACTaGGGAGAAACTTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: PWSRSMIPISLISLMRAEPLLRY*GETCFS
Trigger: AGAAAAGCAAGTTTCTCCCAAGTATCTCAACAAAGG...CTCAGCCCTCATTAAACTAATTAAACTGATGGGTATCATGCTTCTACTCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAGAGTGTTCTCCTTTGTaGAGATACTTGGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKECSPL*RYLGET
Trigger: AGTTTCTCCCAAGTATCTCAACAAAGGAGAACACTC...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp ATACCCATCAGTTTAATTAGTTTAATGAGGGCTGAGGGAACTGGTCCACATTTTACAGAACAAATTGGTTaGCCTTTCTCCCTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: IPISLISLMRAEGTGPHFTEQIG*PFSLLD
Trigger: ATCAAGGAGGGAGAAAGGCAAACCAATTTGTTCTGT...AAAATGTGGACCAGTTCCCTCAGCCCTCATTAAACTAATTAAACTGATGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GGAGGAGCAGGAAATTACACAAGCCTATTAAAGGCTAAGCAAATTCCAAGTAAAACAGAACAAATTGGTTaGCCTTTCTCCCTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: GGAGNYTSLLKAKQIPSKTEQIG*PFSLLD
Trigger: ATCAAGGAGGGAGAAAGGCAAACCAATTTGTTCTGT...TTTACTTGGAATTTGCTTAGCCTTTAATAGGCTTGTGTAATTTCCTGCTCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGCTTAACTTCATCAGCTaGACTCTGCTTCAGTTCACC +
Preference number: 5 (lower is better)
Translates to: VYDVYTICMREHAHISSKLNFIS*TLLQFT
Trigger: GGTGAACTGAAGCAGAGTCAAGCTGATGAAGTTAAG...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGTGCTCAAGAACATGGTaGTGCTTAACTTCATCAGCT +
Preference number: 5 (lower is better)
Translates to: VYDVYTICMREHAHISSKCSRTW*CLTSSA
Trigger: AGCTGATGAAGTTAAGCACAACCATGTTCTTGAGCA...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GATCTGTTAAGTTTGGACATCATAGACCTACAGGTACAAAGAACACATCGCTCTCTGATTCAGGGTTATTaGAATCAAGGGAACTCATTT +
Preference number: 5 (lower is better)
Translates to: DLLSLDIIDLQVQRTHRSLIQGY*NQGNSF
Trigger: AAATGAGTTCCCTTGATTCAAATAACCCTGAATCAG...AGAGCGATGTGTTCTTTGTACCTGTAGGTCTATGATGTCCAAACTTAACAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS-3UTR CAA 90 bp GTTTATGATGTGTATACTATCTGCATGAGGGAGCATGCTCATATTTCTTCTAAGTGTGATCTGTTAAGTTaGGACATCATAGACCTACAG +
Preference number: 5 (lower is better)
Translates to: VYDVYTICMREHAHISSKCDLLS*DIIDLQ
Trigger: CTGTAGGTCTATGATGTCCAAACTTAACAGATCACA...CTTAGAAGAAATATGAGCATGCTCCCTCATGCAGATAGTATACACATCATAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS CCA 72 bp TTCCTGCTGCACTCTGCTTTGTCCCTGGGCAGCTTCTaGCCGAGCAGGTCGGAGGTGGCAGTGGCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: FLLHSALSLGSF*PSRSEVAVAGP
Trigger: TGGACCAGCCACTGCCACCTCCGACCTGCTCGGCCAGAAGCTGCCCAGGGACAAAGCAGAGTGCAGCAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539905.5
ENST00000650874.1
CDS CAA 72 bp GCTGGTCCAAGGCTCAGGGGCCTCCTTGACTCCGGCTaGGGAGGAGGTGCCAAAGAGGCAGCTGTGAACACC +
Preference number: 6 (lower is better)
Translates to: AGPRLRGLLDSG*GGGAKEAAVNT
Trigger: GGTGTTCACAGCTGCCTCTTTGGCACCTCCTCCCAAGCCGGAGTCAAGGAGGCCCCTGAGCCTTGGACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000650874.1
ENST00000651882.1
CDS CCA 72 bp AATGACCTGCACTCTGCTTTGTCCCTGGGCAGCTTCTaGCCGAGCAGGTCGGAGGTGGCAGTGGCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: NDLHSALSLGSF*PSRSEVAVAGP
Trigger: TGGACCAGCCACTGCCACCTCCGACCTGCTCGGCCAGAAGCTGCCCAGGGACAAAGCAGAGTGCAGGTCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217305.3
ENST00000651882.1
CDS GCA 72 bp CCTGCTCCTTGGGGTCCTCCTCAGCGAGATAGAGTGTaGCAGTCTCCATGGCACCATCGTTCAGCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: PAPWGPPQRDRV*QSPWHHRSAGH
Trigger: ATGCCCAGCTGAACGATGGTGCCATGGAGACTGGCACACTCTATCTCGCTGAGGAGGACCCCAAGGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS TCA 72 bp GGAGAAAACCGCCATAGCGCTTCTGGTTGTCCCACTTaGGCTTGGGACGAATGCGCCGCAAGAAGCCCCCAT +
Preference number: 6 (lower is better)
Translates to: GENRHSASGCPT*AWDECAARSPH
Trigger: ATGGGGGCTTCTTGCGGCGCATTCGTCCCAAGCTCAAGTGGGACAACCAGAAGCGCTATGGCGGTTTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS TCA 72 bp GAACTCCCTGGGCCTGACACAATAGGCTTCTCTTCGTaGCAGGGATGTGGAGGAGGAAGGCAGCCGTGTTGG +
Preference number: 6 (lower is better)
Translates to: ELPGPDTIGFSS*QGCGGGRQPCW
Trigger: CCAACACGGCTGCCTTCCTCCTCCACATCCCTGTCACGAAGAGAAGCCTATTGTGTCAGGCCCAGGGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539905.5
ENST00000651882.1
CDS TCA 72 bp AGACCCCCAGGCCCTTCAACTCGAACTCCCTGGGCCTaGCACAATAGGCTTCTCTTCGTGACAGGGATGTGG +
Preference number: 6 (lower is better)
Translates to: RPPGPSTRTPWA*HNRLLFVTGMW
Trigger: CCACATCCCTGTCACGAAGAGAAGCCTATTGTGTCAGGCCCAGGGAGTTCGAGTTGAAGGGCCTGGGGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539905.5
ENST00000651882.1
CDS GCA 72 bp ATCGTTCAGCTGGGCATCCCTCATCAGCTCAGACTCTaGTCCCTCCCTAAACCCGTCAGAGAGACCCCTGAG +
Preference number: 6 (lower is better)
Translates to: IVQLGIPHQLRL*SLPKPVRETPE
Trigger: CTCAGGGGTCTCTCTGACGGGTTTAGGGAGGGAGCAGAGTCTGAGCTGATGAGGGATGCCCAGCTGAACGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS CCA 72 bp GGTCCTCCTCAGCGAGATAGAGTGTGCCAGTCTCCATaGCACCATCGTTCAGCTGGGCATCCCTCATCAGCT +
Preference number: 6 (lower is better)
Translates to: GPPQRDRVCQSP*HHRSAGHPSSA
Trigger: AGCTGATGAGGGATGCCCAGCTGAACGATGGTGCCATGGAGACTGGCACACTCTATCTCGCTGAGGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS GCA 72 bp TCCCATTCCTCAGAGGGCAGCAGGGCAGCCTGGCATTaGAGGGAGCAAATCAGGGGATTGATAGGTTTGGGA +
Preference number: 6 (lower is better)
Translates to: SHSSEGSRAAWH*REQIRGLIGLG
Trigger: TCCCAAACCTATCAATCCCCTGATTTGCTCCCTGCAATGCCAGGCTGCCCTGCTGCCCTCTGAGGAATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
ENST00000650824.1
ENST00000650874.1
ENST00000650937.1
ENST00000651328.1
ENST00000651684.1
ENST00000651882.1
ENST00000652436.1
CDS TCA 72 bp AAGCATTCGGATCTTCCTGAGACCGAGTCACCACCTTaGACTGGCGCCGGAGAAAACCGCCATAGCGCTTCT +
Preference number: 6 (lower is better)
Translates to: KHSDLPETESPP*TGAGENRHSAS
Trigger: AGAAGCGCTATGGCGGTTTTCTCCGGCGCCAGTTCAAGGTGGTGACTCGGTCTCAGGAAGATCCGAATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS CCA 72 bp GAGCAAATCAGGGGATTGATAGGTTTGGGACCATCCTaGGTCTTTACAGCACACAAGGAGCACCGCGACAGG +
Preference number: 6 (lower is better)
Translates to: EQIRGLIGLGPS*VFTAHKEHRDR
Trigger: CCTGTCGCGGTGCTCCTTGTGTGCTGTAAAGACCCAGGATGGTCCCAAACCTATCAATCCCCTGATTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
ENST00000650824.1
ENST00000650874.1
ENST00000650937.1
ENST00000651328.1
ENST00000651684.1
ENST00000651882.1
ENST00000652436.1
CDS TCA 72 bp CTCCTCCAGGCTCTTGCTCAGAGTGTTCTCCTTTGTTaGGATACTTGGGAGAAACTTGCTTTTCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LLQALAQSVLLC*DTWEKLAFLQL
Trigger: GAGCTGGAGAAAAGCAAGTTTCTCCCAAGTATCTCAACAAAGGAGAACACTCTGAGCAAGAGCCTGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
ENST00000650824.1
ENST00000651328.1
CDS CCA 72 bp ATCCTGTCTCAGCAATTCCTGCTGTCATTTAGGTCCTaGATTAGATATTACTTCACCCAGGCAGCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: ILSQQFLLSFRS*IRYYFTQAALP
Trigger: AGGGAGAGCTGCCTGGGTGAAGTAATATCTAATCCAGGACCTAAATGACAGCAGGAATTGCTGAGACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652436.1
CDS CAA 90 bp CCTGCTCAGGGCCTTTGCACTTTCTGTTCTTCTGCCTGCAGTATTTaGACCTCAGACTTCTACATCACTAGTTCCTTCTTTGTCATTAAA +
Preference number: 6 (lower is better)
Translates to: PAQGLCTFCSSACSI*TSDFYITSSFFVIK
Trigger: TTTAATGACAAAGAAGGAACTAGTGATGTAGAAGTCTGAGGTCAAAATACTGCAGGCAGAAGAACAGAAAGTGCAAAGGCCCTGAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651328.1
CDS GCA 72 bp TTTCTCCTGACTCTACTCCATGAAAAGAGGTGCTTATaGATCAAAAAGCTCTCCAGAGTAAGCATTCGGATC +
Preference number: 6 (lower is better)
Translates to: FLLTLLHEKRCL*IKKLSRVSIRI
Trigger: GATCCGAATGCTTACTCTGGAGAGCTTTTTGATGCATAAGCACCTCTTTTCATGGAGTAGAGTCAGGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217305.3
ENST00000539905.5
ENST00000540134.5
CDS CAA 72 bp GGCCTTTGCACTTTCTGTTCTTCTGCCTGCAGTATTTaGACCTCAGACTTCTACATCACTAGTTCCTTCTTT +
Preference number: 6 (lower is better)
Translates to: GLCTFCSSACSI*TSDFYITSSFF
Trigger: AAAGAAGGAACTAGTGATGTAGAAGTCTGAGGTCAAAATACTGCAGGCAGAAGAACAGAAAGTGCAAAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651328.1
ENST00000652436.1
CDS TCA 72 bp TCTTCAGGATTTGGTTCCACGTCTTGTCTTTTTCTCTaGAATAGTCACTCTGTTCCTCAAATAAGCTTGCTC +
Preference number: 6 (lower is better)
Translates to: SSGFGSTSCLFL*NSHSVPQISLL
Trigger: GAGCAAGCTTATTTGAGGAACAGAGTGACTATTTCAGAGAAAAAGACAAGACGTGGAACCAAATCCTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652436.1