Pregenerated sensors for PDXP-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000233360Ensembl transcript IDs: ENST00000456099.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CATGGTCCAGATGGGTTCAGGGGAAGGGGAAACGGTCCCGGCCAGTaGAGTGAGGAGCCTGGCGCGGTCTCTGAGAGCCGTCTCCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: HGPDGFRGRGNGPGQ*SEEPGAVSESRLRS Trigger: GGAGCGGAGACGGCTCTCAGAGACCGCGCCAGGCTCCTCACTCCACTGGCCGGGACCGTTTCCCCTTCCCCTGAACCCATCTGGACCATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS TCA 90 bp | CGCCTGGACCCATGGGGTGCCGTGTCCACAGGAAGGCCTTGGAGATaGGCTGTGCCATCCAGAATCAGCTGGCCCGCATCCTGGCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: RLDPWGAVSTGRPWR*AVPSRISWPASWPS Trigger: ACTCGGCCAGGATGCGGGCCAGCTGATTCTGGATGGCACAGCTCATCTCCAAGGCCTTCCTGTGGACACGGCACCCCATGGGTCCAGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 90 bp | CCCTCATGGCTCTGTCCACCACGATGGCTGAGAGCTTCAAGGAGCTaGACCCTGATTCCAGCATGGGGTGAGCACAGACGGGGCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: PSWLCPPRWLRASRS*TLIPAWGEHRRGPA Trigger: GGCTGGGCCCCGTCTGTGCTCACCCCATGCTGGAATCAGGGTCCAGCTCCTTGAAGCTCTCAGCCATCGTGGTGGACAGAGCCATGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS TCA 90 bp | GGGACAGGGGAAAGAGCTCCCGCTCCCATTCTCCCTCCACCTGTGTaGCCTGGGGCAAGCTCCCTGCCCTCCCTGCATCTTAGTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: GTGERAPAPILPPPV*PGASSLPSLHLSFP Trigger: TGGGAAACTAAGATGCAGGGAGGGCAGGGAGCTTGCCCCAGGTCACACAGGTGGAGGGAGAATGGGAGCGGGAGCTCTTTCCCCTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 90 bp | GCCTCTTCTCAGCTGTTACCCTCCAGGACACAGTCAGTGACAGGCTaGCCTCTGAGGAACTTCCGTCCACTGCCGTGCCCACCCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ASSQLLPSRTQSVTG*PLRNFRPLPCPPQP Trigger: TGGCTGGGGTGGGCACGGCAGTGGACGGAAGTTCCTCAGAGGCCAGCCTGTCACTGACTGTGTCCTGGAGGGTAACAGCTGAGAAGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 90 bp | GACCAGGCTGGGGACAGTTCCCAGGTCAGTGAGGGTGGCCAGGCCTaGGAGGGTGTTCAGCTTAGCAGAGATGAAGGATATCTAGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: DQAGDSSQVSEGGQA*EGVQLSRDEGYLGG Trigger: CCCTCCTAGATATCCTTCATCTCTGCTAAGCTGAACACCCTCCCAGGCCTGGCCACCCTCACTGACCTGGGAACTGTCCCCAGCCTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 90 bp | TGCAGTAGGACTTGGTCATTCCTTCCTGCCCAGTCAAGTGGCTTCTaGGAAGAGGAAAGGGCACGCCAGATGGAGAGGGGCTCCATCCAT | + |
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Preference number: 5 (lower is better) Translates to: CSRTWSFLPAQSSGF*EEERARQMERGSIH Trigger: ATGGATGGAGCCCCTCTCCATCTGGCGTGCCCTTTCCTCTTCCCAGAAGCCACTTGACTGGGCAGGAAGGAATGACCAAGTCCTACTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 90 bp | CCTTGGCTTCAGCAGACACACGTTTCTTGGGACTTCGCTCTGAACTaGAGCGTCCACGATTCAGGGGGCAATGAGATTCGACCCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: PWLQQTHVSWDFALN*SVHDSGGNEIRPKG Trigger: GCCTTTGGGTCGAATCTCATTGCCCCCTGAATCGTGGACGCTCCAGTTCAGAGCGAAGTCCCAAGAAACGTGTGTCTGCTGAAGCCAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS TCA 90 bp | GCTGTGGCCACCTGGCCACAGATGGCAAGATTTCCTCCCACGTGCTaGTTGCATTTGCTTGGTAGAGGCTGTCCAGATCACAACATAAGT | + |
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Preference number: 5 (lower is better) Translates to: AVATWPQMARFPPTC*LHLLGRGCPDHNIS Trigger: ACTTATGTTGTGATCTGGACAGCCTCTACCAAGCAAATGCAATCAGCACGTGGGAGGAAATCTTGCCATCTGTGGCCAGGTGGCCACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 72 bp | GATGGGTTCAGGGGAAGGGGAAACGGTCCCGGCCAGTaGAGTGAGGAGCCTGGCGCGGTCTCTGAGAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: DGFRGRGNGPGQ*SEEPGAVSESR Trigger: ACGGCTCTCAGAGACCGCGCCAGGCTCCTCACTCCACTGGCCGGGACCGTTTCCCCTTCCCCTGAACCCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 72 bp | GCATGGGGTGAGCACAGACGGGGCCCAGCCCTCACCTaGGGATACCAAGACGTGATCTCAGCTGGGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: AWGEHRRGPALT*GYQDVISAGRG Trigger: CCCCCTCCCAGCTGAGATCACGTCTTGGTATCCCCAGGTGAGGGCTGGGCCCCGTCTGTGCTCACCCCATGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS GCA 72 bp | GGAAAGGGCACGCCAGATGGAGAGGGGCTCCATCCATaGTCTCAGGGAAATGTCACCCCCACCACGCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: GKGTPDGEGLHP*SQGNVTPTTPC Trigger: ACAAGGCGTGGTGGGGGTGACATTTCCCTGAGAGCATGGATGGAGCCCCTCTCCATCTGGCGTGCCCTTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 72 bp | CTCTGTCCACCACGATGGCTGAGAGCTTCAAGGAGCTaGACCCTGATTCCAGCATGGGGTGAGCACAGACGG | + |
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Preference number: 6 (lower is better) Translates to: LCPPRWLRASRS*TLIPAWGEHRR Trigger: CCGTCTGTGCTCACCCCATGCTGGAATCAGGGTCCAGCTCCTTGAAGCTCTCAGCCATCGTGGTGGACAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CAA 72 bp | CCGGCCCCAGCCTTGGCTTCAGCAGACACACGTTTCTaGGGACTTCGCTCTGAACTGGAGCGTCCACGATTC | + |
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Preference number: 6 (lower is better) Translates to: PAPALASADTRF*GLRSELERPRF Trigger: GAATCGTGGACGCTCCAGTTCAGAGCGAAGTCCCAAGAAACGTGTGTCTGCTGAAGCCAAGGCTGGGGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS GCA 72 bp | TTCTCCCTCCACCTGTGTGACCTGGGGCAAGCTCCCTaGCCTCCCTGCATCTTAGTTTCCCAGTCTGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: FSLHLCDLGQAP*PPCILVSQSAV Trigger: TACTGCAGACTGGGAAACTAAGATGCAGGGAGGGCAGGGAGCTTGCCCCAGGTCACACAGGTGGAGGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 72 bp | CGGCCCCAGCCTTGGCTTCAGCAGACACACGTTTCTTaGGACTTCGCTCTGAACTGGAGCGTCCACGATTCA | + |
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Preference number: 6 (lower is better) Translates to: RPQPWLQQTHVS*DFALNWSVHDS Trigger: TGAATCGTGGACGCTCCAGTTCAGAGCGAAGTCCCAAGAAACGTGTGTCTGCTGAAGCCAAGGCTGGGGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 72 bp | ACTTGGTCATTCCTTCCTGCCCAGTCAAGTGGCTTCTaGGAAGAGGAAAGGGCACGCCAGATGGAGAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: TWSFLPAQSSGF*EEERARQMERG Trigger: GCCCCTCTCCATCTGGCGTGCCCTTTCCTCTTCCCAGAAGCCACTTGACTGGGCAGGAAGGAATGACCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CAA 90 bp | ATCCATGCTCTCAGGGAAATGTCACCCCCACCACGCCTTGTCATCTaGTTTCCACTCTCATCTGGGACTGTGGCCCTCCTGGGTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: IHALREMSPPPRLVI*FPLSSGTVALLGSL Trigger: GAGGGAACCCAGGAGGGCCACAGTCCCAGATGAGAGTGGAAACAAGATGACAAGGCGTGGTGGGGGTGACATTTCCCTGAGAGCATGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 72 bp | CAAGTGGCTTCTGGGAAGAGGAAAGGGCACGCCAGATaGAGAGGGGCTCCATCCATGCTCTCAGGGAAATGT | + |
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Preference number: 6 (lower is better) Translates to: QVASGKRKGHAR*RGAPSMLSGKC Trigger: ACATTTCCCTGAGAGCATGGATGGAGCCCCTCTCCATCTGGCGTGCCCTTTCCTCTTCCCAGAAGCCACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS TCA 72 bp | GGCTTCAGCAGACACACGTTTCTTGGGACTTCGCTCTaGACTGGAGCGTCCACGATTCAGGGGGCAATGAGA | + |
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Preference number: 6 (lower is better) Translates to: GFSRHTFLGTSL*TGASTIQGAMR Trigger: TCTCATTGCCCCCTGAATCGTGGACGCTCCAGTTCAGAGCGAAGTCCCAAGAAACGTGTGTCTGCTGAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 72 bp | CAGCAGACACACGTTTCTTGGGACTTCGCTCTGAACTaGAGCGTCCACGATTCAGGGGGCAATGAGATTCGA | + |
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Preference number: 6 (lower is better) Translates to: QQTHVSWDFALN*SVHDSGGNEIR Trigger: TCGAATCTCATTGCCCCCTGAATCGTGGACGCTCCAGTTCAGAGCGAAGTCCCAAGAAACGTGTGTCTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS TCA 72 bp | ACCTGGCCACAGATGGCAAGATTTCCTCCCACGTGCTaGTTGCATTTGCTTGGTAGAGGCTGTCCAGATCAC | + |
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Preference number: 6 (lower is better) Translates to: TWPQMARFPPTC*LHLLGRGCPDH Trigger: GTGATCTGGACAGCCTCTACCAAGCAAATGCAATCAGCACGTGGGAGGAAATCTTGCCATCTGTGGCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CCA 72 bp | TCCCTGCATCTTAGTTTCCCAGTCTGCAGTAGGACTTaGTCATTCCTTCCTGCCCAGTCAAGTGGCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLHLSFPVCSRT*SFLPAQSSGFW Trigger: CCAGAAGCCACTTGACTGGGCAGGAAGGAATGACCAAGTCCTACTGCAGACTGGGAAACTAAGATGCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CAA 72 bp | GTGGCCAAGGCAAGGAAATTGGGAGCCATAGAGCGTTaGAACTCAGCGGTGGCTAGGTCAGCCATATATACC | + |
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Preference number: 6 (lower is better) Translates to: VAKARKLGAIER*NSAVARSAIYT Trigger: GGTATATATGGCTGACCTAGCCACCGCTGAGTTCAAACGCTCTATGGCTCCCAATTTCCTTGCCTTGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS CAA 90 bp | CAATTCAGTGTGGCCAAGGCAAGGAAATTGGGAGCCATAGAGCGTTaGAACTCAGCGGTGGCTAGGTCAGCCATATATACCCTGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: QFSVAKARKLGAIER*NSAVARSAIYTLGQ Trigger: CTGTCCCAGGGTATATATGGCTGACCTAGCCACCGCTGAGTTCAAACGCTCTATGGCTCCCAATTTCCTTGCCTTGGCCACACTGAATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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| CDS GCA 72 bp | GGCCACAGATGGCAAGATTTCCTCCCACGTGCTGATTaGATTTGCTTGGTAGAGGCTGTCCAGATCACAACA | + |
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Preference number: 6 (lower is better) Translates to: GHRWQDFLPRAD*ICLVEAVQITT Trigger: TGTTGTGATCTGGACAGCCTCTACCAAGCAAATGCAATCAGCACGTGGGAGGAAATCTTGCCATCTGTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456099.1 |
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