RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDXK (Homo sapiens)

Ensembl gene IDs: ENSG00000160209

Ensembl transcript IDs: ENST00000291565.9, ENST00000327574.4, ENST00000343528.10, ENST00000398078.7, ENST00000398081.5, ENST00000398085.7, ENST00000438837.1, ENST00000461123.1, ENST00000467908.1, ENST00000468090.5, ENST00000468392.5, ENST00000470029.5, ENST00000472777.5, ENST00000476084.1, ENST00000476313.5, ENST00000481512.5, ENST00000490666.5, ENST00000498040.5, ENST00000621478.1

Found 1605 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCGGCCTGGCCCCTCGCTGGTGTCCGTCGGCAGGCTCCTGGCCCTaGCCTTCTCCAGCCCCGCAGCTCCTTGTGTTCACACCAGCTGCC +
Preference number: 1 (lower is better)
Translates to: PGLAPRWCPSAGSWP*PSPAPQLLVFTPAA
Trigger: GGCAGCTGGTGTGAACACAAGGAGCTGCGGGGCTGGAGAAGGCCAGGGCCAGGAGCCTGCCGACGGACACCAGCGAGGGGCCAGGCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CCA 90 bp GCCATCCTCCTTCCTGCTGGTGTGGCGGCGCCCTGTAGGGACCAGTaGCTCTGGGCTGCAACGGGCCTGCCACCCGTGTCCTCGGAGCCA +
Preference number: 1 (lower is better)
Translates to: AILLPAGVAAPCRDQ*LWAATGLPPVSSEP
Trigger: TGGCTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACCAGCAGGAAGGAGGATGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 90 bp AGGGGGACCACGGAGGCGACAGGTGCTTTGATGCCTCCGAAGAGCTaGGCTCCATTCCACGGAGGGAGCGGGCTGCGCCGCCGTCCTCCC +
Preference number: 1 (lower is better)
Translates to: RGTTEATGALMPPKS*APFHGGSGLRRRPP
Trigger: GGGAGGACGGCGGCGCAGCCCGCTCCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCATCAAAGCACCTGTCGCCTCCGTGGTCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp TGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTaGCACCCGTGTCCTCGGAGCCAGGAAACATGGCTGCGAAACCCG +
Preference number: 1 (lower is better)
Translates to: WRRPVGTSGSGLQRA*HPCPRSQETWLRNP
Trigger: CGGGTTTCGCAGCCATGTTTCCTGGCTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp AAGCAGGGCCGGCCACTCCAGGCAAACGAAGCCACCCCCGAACCTTaGAGAGGCCGCACTCCCTCAGCAGGGGGACCACGGAGGCGACAG +
Preference number: 1 (lower is better)
Translates to: KQGRPLQANEATPEP*RGRTPSAGGPRRRQ
Trigger: CTGTCGCCTCCGTGGTCCCCCTGCTGAGGGAGTGCGGCCTCTGCAAGGTTCGGGGGTGGCTTCGTTTGCCTGGAGTGGCCGGCCCTGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp CTCCTTCCTGCTGGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTaGGCTGCAACGGGCCTGCCACCCGTGTCCTCGGAGCCAGGAAAC +
Preference number: 1 (lower is better)
Translates to: LLPAGVAAPCRDQWL*AATGLPPVSSEPGN
Trigger: GTTTCCTGGCTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACCAGCAGGAAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp CCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGTaGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTGCC +
Preference number: 1 (lower is better)
Translates to: PGGNGPWTGQAPAAP*FDSRQSGEGMPDSA
Trigger: GGCAGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp CCCAGGGCTACAGGGCCATACAGGCTCAGGTATCCTCCCCTGTGCTaGGAGTCCGGAGTGGGGACGGTGTCCACCCAGACCCGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: PRATGPYRLRYPPLC*ESGVGTVSTQTRQA
Trigger: GGCCTGGCGGGTCTGGGTGGACACCGTCCCCACTCCGGACTCCCAGCACAGGGGAGGATACCTGAGCCTGTATGGCCCTGTAGCCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 90 bp GGCCGCACTCCCTCAGCAGGGGGACCACGGAGGCGACAGGTGCTTTaGTGCCTCCGAAGAGCTGAGCTCCATTCCACGGAGGGAGCGGGC +
Preference number: 1 (lower is better)
Translates to: GRTPSAGGPRRRQVL*CLRRAELHSTEGAG
Trigger: GCCCGCTCCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCATCAAAGCACCTGTCGCCTCCGTGGTCCCCCTGCTGAGGGAGTGCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp CTGCCCAGGGCTACAGGGCCATACAGGCTCAGGTATCCTCCCCTGTaGTGGGAGTCCGGAGTGGGGACGGTGTCCACCCAGACCCGCCAG +
Preference number: 1 (lower is better)
Translates to: LPRATGPYRLRYPPL*WESGVGTVSTQTRQ
Trigger: CTGGCGGGTCTGGGTGGACACCGTCCCCACTCCGGACTCCCAGCACAGGGGAGGATACCTGAGCCTGTATGGCCCTGTAGCCCTGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp ACGGACACGGGAGCCGCCTCTCCAGCGAGTCTCAGCGGAAGCCGCTaGCCTGGCAGTGAGAGGCGGCGTGGAAGGAAAAGGCTCAGCAGG +
Preference number: 1 (lower is better)
Translates to: TDTGAASPASLSGSR*PGSERRRGRKRLSR
Trigger: CCTGCTGAGCCTTTTCCTTCCACGCCGCCTCTCACTGCCAGGCCAGCGGCTTCCGCTGAGACTCGCTGGAGAGGCGGCTCCCGTGTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp GGAGCCCCCTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTaGACGGACACGGGAGCCGCCTCTCCAGCGAGTCTCAGCGGAAGC +
Preference number: 1 (lower is better)
Translates to: GAPSALVISIHLSAR*TDTGAASPASLSGS
Trigger: GCTTCCGCTGAGACTCGCTGGAGAGGCGGCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAGGGGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp GGACGGTGTCCACCCAGACCCGCCAGGCCACGCTCCAGGCTTCCCTaGCTTAGGGCTGACAAGACTTCCGGGCAGTGGACTTGGCCTCCC +
Preference number: 1 (lower is better)
Translates to: GRCPPRPARPRSRLP*LRADKTSGQWTWPP
Trigger: GGGAGGCCAAGTCCACTGCCCGGAAGTCTTGTCAGCCCTAAGCCAGGGAAGCCTGGAGCGTGGCCTGGCGGGTCTGGGTGGACACCGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp GGCCATACAGGCTCAGGTATCCTCCCCTGTGCTGGGAGTCCGGAGTaGGGACGGTGTCCACCCAGACCCGCCAGGCCACGCTCCAGGCTT +
Preference number: 1 (lower is better)
Translates to: GHTGSGILPCAGSPE*GRCPPRPARPRSRL
Trigger: AAGCCTGGAGCGTGGCCTGGCGGGTCTGGGTGGACACCGTCCCCACTCCGGACTCCCAGCACAGGGGAGGATACCTGAGCCTGTATGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp GACGCAGGGACCTGGCCCTGGCTCTGGTCTGGCGGCAACCCCTGCTaGCAGAGGCAGGAGGTGTGCGGCTGGAGTCAGAAACTGAGGTGC +
Preference number: 1 (lower is better)
Translates to: DAGTWPWLWSGGNPC*QRQEVCGWSQKLRC
Trigger: GCACCTCAGTTTCTGACTCCAGCCGCACACCTCCTGCCTCTGCCAGCAGGGGTTGCCGCCAGACCAGAGCCAGGGCCAGGTCCCTGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp CTGAAGGCCACCAGGGGCCTCTGCCGAAGTCAGGAGAGACGAACATaGCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCT +
Preference number: 1 (lower is better)
Translates to: LKATRGLCRSQERRT*PGGNGPWTGQAPAA
Trigger: AGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTCTCTCCTGACTTCGGCAGAGGCCCCTGGTGGCCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp CCTTCTGGGAGCCCCCTCGGCCCTGGTGATCAGCATCCATCTGAGTaGTCGGTGGACGGACACGGGAGCCGCCTCTCCAGCGAGTCTCAG +
Preference number: 1 (lower is better)
Translates to: PSGSPLGPGDQHPSE*SVDGHGSRLSSESQ
Trigger: CTGAGACTCGCTGGAGAGGCGGCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAGGGGGCTCCCAGAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp CTCCAGCCCCGCAGCTCCTTGTGTTCACACCAGCTGCCCCTTCCCTaGAGCAGGGACCACCAAGCCCAGCAGCAGGGCACCTGTCCCATC +
Preference number: 1 (lower is better)
Translates to: LQPRSSLCSHQLPLP*SRDHQAQQQGTCPI
Trigger: GATGGGACAGGTGCCCTGCTGCTGGGCTTGGTGGTCCCTGCTGCAGGGAAGGGGCAGCTGGTGTGAACACAAGGAGCTGCGGGGCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CCA 90 bp GGGCTGCAACGGGCCTGCCACCCGTGTCCTCGGAGCCAGGAAACATaGCTGCGAAACCCGTGTCTGACTCACTGGCTGAGGTGGGGGAGC +
Preference number: 1 (lower is better)
Translates to: GLQRACHPCPRSQET*LRNPCLTHWLRWGS
Trigger: GCTCCCCCACCTCAGCCAGTGAGTCAGACACGGGTTTCGCAGCCATGTTTCCTGGCTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp CTACAGAGGGCCAGGTGGTTCTGGCAGATCCCTGCACTCACATACTaGGGAGGCCGCCTCCCCGCCAGGCTCCGGACACAGCCATCCTCC +
Preference number: 1 (lower is better)
Translates to: LQRARWFWQIPALTY*GGRLPARLRTQPSS
Trigger: GGAGGATGGCTGTGTCCGGAGCCTGGCGGGGAGGCGGCCTCCCCAGTATGTGAGTGCAGGGATCTGCCAGAACCACCTGGCCCTCTGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp CACCAGGGGCCTCTGCCGAAGTCAGGAGAGACGAACATGCCCGGGTaGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGTGGTT +
Preference number: 1 (lower is better)
Translates to: HQGPLPKSGETNMPG*KRAVDRAGSSCSVV
Trigger: AACCACGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTCTCTCCTGACTTCGGCAGAGGCCCCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp GCCCATGAGACCAGGCAGGCGGCAGGGGAGAGAGGGAGAGACTCCTaGCTACCCGGGCAGCAGAGTACAGTCCAGCCACACAGTGGGGAC +
Preference number: 1 (lower is better)
Translates to: AHETRQAAGERGRDS*LPGQQSTVQPHSGD
Trigger: GTCCCCACTGTGTGGCTGGACTGTACTCTGCTGCCCGGGTAGCCAGGAGTCTCTCCCTCTCTCCCCTGCCGCCTGCCTGGTCTCATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp CAGGGACCACCAAGCCCAGCAGCAGGGCACCTGTCCCATCCCCTCTaGCTCTACACTCCGAAAGCCAGGACAGCGCAACCCGTCCACCCG +
Preference number: 1 (lower is better)
Translates to: QGPPSPAAGHLSHPL*LYTPKARTAQPVHP
Trigger: CGGGTGGACGGGTTGCGCTGTCCTGGCTTTCGGAGTGTAGAGCCAGAGGGGATGGGACAGGTGCCCTGCTGCTGGGCTTGGTGGTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR TCA 90 bp GTCACCACACACCTGGCACCCTCCAAGGGCCCACGCGGAGCCAGCTaGGGACTCACGTCCATGCTCCAGAACGTCAGCACCTCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: VTTHLAPSKGPRGAS*GLTSMLQNVSTSAS
Trigger: GGAGGCAGAGGTGCTGACGTTCTGGAGCATGGACGTGAGTCCTCAGCTGGCTCCGCGTGGGCCCTTGGAGGGTGCCAGGTGTGTGGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp CCAGTTAAACGCCCTACAGAGGGCCAGGTGGTTCTGGCAGATCCCTaGACTCACATACTGGGGAGGCCGCCTCCCCGCCAGGCTCCGGAC +
Preference number: 1 (lower is better)
Translates to: PVKRPTEGQVVLADP*THILGRPPPRQAPD
Trigger: GTCCGGAGCCTGGCGGGGAGGCGGCCTCCCCAGTATGTGAGTGCAGGGATCTGCCAGAACCACCTGGCCCTCTGTAGGGCGTTTAACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp GCAGAGGCCGCACTCCCTCAGCAGGGGGACCACGGAGGCGACAGGTaGTTTGATGCCTCCGAAGAGCTGAGCTCCATTCCACGGAGGGAG +
Preference number: 1 (lower is better)
Translates to: AEAALPQQGDHGGDR*FDASEELSSIPRRE
Trigger: CTCCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCATCAAAGCACCTGTCGCCTCCGTGGTCCCCCTGCTGAGGGAGTGCGGCCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp TCCCTGGCCAGTGCCCTCCCAGGGCCTTGCACCGTGCACCTACTGTaGGCTCTGCCTTCTCTGACACCAGGCACGAGAGGCCTGAGCTCA +
Preference number: 1 (lower is better)
Translates to: SLASALPGPCTVHLL*ALPSLTPGTRGLSS
Trigger: TGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAAGGCAGAGCCCACAGTAGGTGCACGGTGCAAGGCCCTGGGAGGGCACTGGCCAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp TACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTaGTTCCTGAGGCCTCTGCCCTGGGCTTGCAGACGGCATTGCCTC +
Preference number: 1 (lower is better)
Translates to: YCPGHGGPRSRCHQG*FLRPLPWACRRHCL
Trigger: GAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR GCA 90 bp TGCTGTCACGGGCAGCACGTGGCAAACGCGCAGTGCTCAGCCTGCTaGACCACGGATGAGGGGAGCTTCCACAAGGAACCTGACGGGGTG +
Preference number: 1 (lower is better)
Translates to: CCHGQHVANAQCSAC*TTDEGSFHKEPDGV
Trigger: CACCCCGTCAGGTTCCTTGTGGAAGCTCCCCTCATCCGTGGTGCAGCAGGCTGAGCACTGCGCGTTTGCCACGTGCTGCCCGTGACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp CAGCACCTGCACCTGCCAGGCAGGAACACACGACAGGCCCAGCTCTaGCCAGGGCTACAGGGCCATACAGGCTCAGGTATCCTCCCCTGT +
Preference number: 1 (lower is better)
Translates to: QHLHLPGRNTRQAQL*PGLQGHTGSGILPC
Trigger: ACAGGGGAGGATACCTGAGCCTGTATGGCCCTGTAGCCCTGGGCAGAGCTGGGCCTGTCGTGTGTTCCTGCCTGGCAGGTGCAGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp TGCCGAAGTCAGGAGAGACGAACATGCCCGGGTGGAAACGGGCCGTaGACAGGGCAGGCTCCAGCTGCTCCGTGGTTTGACAGCAGGCAG +
Preference number: 1 (lower is better)
Translates to: CRSQERRTCPGGNGP*TGQAPAAPWFDSRQ
Trigger: CTGCCTGCTGTCAAACCACGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTCTCTCCTGACTTCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp ATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCAGTGCTCAGCCTaGTGCACCACGGATGAGGGGAGCTTCCACAAGGAACCTGACGGG +
Preference number: 1 (lower is better)
Translates to: MCCHGQHVANAQCSA*CTTDEGSFHKEPDG
Trigger: CCCGTCAGGTTCCTTGTGGAAGCTCCCCTCATCCGTGGTGCAGCAGGCTGAGCACTGCGCGTTTGCCACGTGCTGCCCGTGACAGCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp AAGATTCCCACCTCCTTCCACCTGCAGATGGCCAGCACCTGCACCTaGCAGGCAGGAACACACGACAGGCCCAGCTCTGCCCAGGGCTAC +
Preference number: 1 (lower is better)
Translates to: KIPTSFHLQMASTCT*QAGTHDRPSSAQGY
Trigger: GTAGCCCTGGGCAGAGCTGGGCCTGTCGTGTGTTCCTGCCTGGCAGGTGCAGGTGCTGGCCATCTGCAGGTGGAAGGAGGTGGGAATCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp TCCAGGTGTCACCAGGGCTGGTTCCTGAGGCCTCTGCCCTGGGCTTaGAGACGGCATTGCCTCCCTGTTTCCTCATGGGGCTGTCCCTCT +
Preference number: 1 (lower is better)
Translates to: SRCHQGWFLRPLPWA*RRHCLPVSSWGCPS
Trigger: AGAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTGGTGACACCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CCA 90 bp GTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGTGGGATaGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCGCT +
Preference number: 1 (lower is better)
Translates to: VLHLLVASCPLWDVG*AQSPQEPSPTGEGA
Trigger: AGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CCA 90 bp CCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTGAGGCCTCTGCCCTaGGCTTGCAGACGGCATTGCCTCCCTGTTTCCTCATGGGGCTGT +
Preference number: 1 (lower is better)
Translates to: PRSRCHQGWFLRPLP*ACRRHCLPVSSWGC
Trigger: ACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTGGTGACACCTGGACCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CCA 90 bp ATCGGGAAGGACTGCAGCCAGGCGGCTCCAATTCTCCTACTGTCCTaGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCT +
Preference number: 1 (lower is better)
Translates to: IGKDCSQAAPILLLS*ARGSKVQVSPGLVP
Trigger: AGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCCTGGCTGCAGTCCTTCCCGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR TCA 90 bp CACAAGGTGGAGGCTCTGCCAAGCCCAGCTCACGGTGTGGAAAAATaGACGCACCTTGTGGTACGGCCTCAAGGAACGGGGGCCTGGCCG +
Preference number: 1 (lower is better)
Translates to: HKVEALPSPAHGVEK*THLVVRPQGTGAWP
Trigger: CGGCCAGGCCCCCGTTCCTTGAGGCCGTACCACAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGCTTGGCAGAGCCTCCACCTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR GCA 90 bp ATTCTTCCTGACCCCAACCGTTACCACCCGACTCCTTCTCAGAGATaGAAAGACAGAGGCCACCCAGGCCCAGCCCAGCGCGACACGGCC +
Preference number: 1 (lower is better)
Translates to: ILPDPNRYHPTPSQR*KDRGHPGPAQRDTA
Trigger: GGCCGTGTCGCGCTGGGCTGGGCCTGGGTGGCCTCTGTCTTTGCATCTCTGAGAAGGAGTCGGGTGGTAACGGTTGGGGTCAGGAAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp GGGCAGGCACCCCTCTGTCCTGTCTACAAATGCTGTGGCTCAATGTaGTGTCACGGGCAGCACGTGGCAAACGCGCAGTGCTCAGCCTGC +
Preference number: 1 (lower is better)
Translates to: GQAPLCPVYKCCGSM*CHGQHVANAQCSAC
Trigger: GCAGGCTGAGCACTGCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGACAGGACAGAGGGGTGCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp CAGGGCTGGTTCCTGAGGCCTCTGCCCTGGGCTTGCAGACGGCATTaGCTCCCTGTTTCCTCATGGGGCTGTCCCTCTGTGTGTGTCTGT +
Preference number: 1 (lower is better)
Translates to: QGWFLRPLPWACRRH*LPVSSWGCPSVCVC
Trigger: ACAGACACACACAGAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CCA 90 bp GCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGATGCATaGGGTGAGTGGCCCTGTGGCACTGGAAGGCATATCCCACCAGAA +
Preference number: 1 (lower is better)
Translates to: ALAVRPSTDGQDRDA*GEWPCGTGRHIPPE
Trigger: TTCTGGTGGGATATGCCTTCCAGTGCCACAGGGCCACTCACCCCATGCATCTCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp CCCAGCTTCCTATCGAAACAGAGGGCATGGTCTTGCACCTCTTGGTaGCCTCCTGCCCACTGTGGGATGTGGGATGGGCCCAGAGCCCAC +
Preference number: 1 (lower is better)
Translates to: PSFLSKQRAWSCTSW*PPAHCGMWDGPRAH
Trigger: GTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGATAGGAAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR GCA 90 bp TGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCAGTaGTCAGCCTGCTGCACCACGGATGAGGGGAGCTTCCACAAGGAA +
Preference number: 1 (lower is better)
Translates to: CGSMCCHGQHVANAQ*SACCTTDEGSFHKE
Trigger: TTCCTTGTGGAAGCTCCCCTCATCCGTGGTGCAGCAGGCTGAGCACTGCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp CACATAACCTGCTCTGCTCACTCACAAACTCCAGTTCCCCTGCTCTaGGCCCAGGCAGGCGATCCACAGGGAGGGGTGTGTGAAGGAGGC +
Preference number: 1 (lower is better)
Translates to: HITCSAHSQTPVPLL*AQAGDPQGGVCEGG
Trigger: GCCTCCTTCACACACCCCTCCCTGTGGATCGCCTGCCTGGGCCCAGAGCAGGGGAACTGGAGTTTGTGAGTGAGCAGAGCAGGTTATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 90 bp CCTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATaGCGGCTCGAGCTTGACACAGGTTCTCCCAGCTGCTCGACACGC +
Preference number: 1 (lower is better)
Translates to: PPITKKGLQTPHGDL*RLELDTGSPSCSTR
Trigger: GCGTGTCGAGCAGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp AGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTaGAGGGGCAGAAGGAGTCCCACACCTGACACTGCGTTCTCATGC +
Preference number: 1 (lower is better)
Translates to: RIKACSPGHTARNTH*RGRRSPTPDTAFSC
Trigger: GCATGAGAACGCAGTGTCAGGTGTGGGACTCCTTCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTaGCCCGACACAGGTGGCCCCATCGGAGGGCAGGAAGGACAAGGA +
Preference number: 1 (lower is better)
Translates to: PHSGDTSDLHKHGHC*PDTGGPIGGQEGQG
Trigger: TCCTTGTCCTTCCTGCCCTCCGATGGGGCCACCTGTGTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp AGCCAGCTGAGGACTCACGTCCATGCTCCAGAACGTCAGCACCTCTaGCTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACC +
Preference number: 1 (lower is better)
Translates to: SQLRTHVHAPERQHL*LPSPRRGFRHLMGT
Trigger: GGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAGGCAGAGGTGCTGACGTTCTGGAGCATGGACGTGAGTCCTCAGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp GTCCGTCCCAGCACTGACGGGCAGGACAGAGATGCATGGGGTGAGTaGCCCTGTGGCACTGGAAGGCATATCCCACCAGAAATGGGTTTC +
Preference number: 1 (lower is better)
Translates to: VRPSTDGQDRDAWGE*PCGTGRHIPPEMGF
Trigger: GAAACCCATTTCTGGTGGGATATGCCTTCCAGTGCCACAGGGCCACTCACCCCATGCATCTCTGTCCTGCCCGTCAGTGCTGGGACGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp ACAGGGAGCTCCAGGAAATCCTCTCAAAGGGGCCACTGGGAATACTaGCCACAAGGTGGAGGCTCTGCCAAGCCCAGCTCACGGTGTGGA +
Preference number: 1 (lower is better)
Translates to: TGSSRKSSQRGHWEY*PQGGGSAKPSSRCG
Trigger: TCCACACCGTGAGCTGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGAGGATTTCCTGGAGCTCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CCA 90 bp ACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTaGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACA +
Preference number: 1 (lower is better)
Translates to: TEGMVLHLLVASCPL*DVGWAQSPQEPSPT
Trigger: TGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR TCA 90 bp CTGGTGGCTGGCAATGTGGCACACGCCCCAGTCTCCACTTGGCAGTaGGGGTATTTCCAGTTAAACGCCCTACAGAGGGCCAGGTGGTTC +
Preference number: 1 (lower is better)
Translates to: LVAGNVAHAPVSTWQ*GYFQLNALQRARWF
Trigger: GAACCACCTGGCCCTCTGTAGGGCGTTTAACTGGAAATACCCTCACTGCCAAGTGGAGACTGGGGCGTGTGCCACATTGCCAGCCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 90 bp GAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGAGCTTaGCACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTG +
Preference number: 1 (lower is better)
Translates to: EGASDTSWGPMTARA*HRFSQLLDTLWDVL
Trigger: CAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp AGATGGCAAACAGGGGCCCGTCTTCCCGGAGGCCCAGGAGCCTTGTaGGGAAGGGAGCCGGGTTTTCAGATCACAAATTTCTGTGACCAC +
Preference number: 1 (lower is better)
Translates to: RWQTGARLPGGPGAL*GREPGFQITNFCDH
Trigger: GTGGTCACAGAAATTTGTGATCTGAAAACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCCTCCGGGAAGACGGGCCCCTGTTTGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp GAAGCTCAGACAGGGAGCTCCAGGAAATCCTCTCAAAGGGGCCACTaGGAATACTGGCCACAAGGTGGAGGCTCTGCCAAGCCCAGCTCA +
Preference number: 1 (lower is better)
Translates to: EAQTGSSRKSSQRGH*EYWPQGGGSAKPSS
Trigger: TGAGCTGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGAGGATTTCCTGGAGCTCCCTGTCTGAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR TCA 90 bp AGGTCTGCAGACCGACTTGAATTTGCTGGGGCCTGGGAAGGTCCCTaGTGCTGCACCGTGTGTCTCCAAGCAAGCTCACATCAACCCTCC +
Preference number: 1 (lower is better)
Translates to: RSADRLEFAGAWEGP*CCTVCLQASSHQPS
Trigger: GGAGGGTTGATGTGAGCTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAATTCAAGTCGGTCTGCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp CTCTCAAAGGGGCCACTGGGAATACTGGCCACAAGGTGGAGGCTCTaGCAAGCCCAGCTCACGGTGTGGAAAAATGAACGCACCTTGTGG +
Preference number: 1 (lower is better)
Translates to: LSKGPLGILATRWRL*QAQLTVWKNERTLW
Trigger: CCACAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CCA 90 bp ACGGATGAGGGGAGCTTCCACAAGGAACCTGACGGGGTGGTTCTCTaGAGCTTCAAAGCTGCTCTTGGCCCAGCACAGACCTTACTGCGT +
Preference number: 1 (lower is better)
Translates to: TDEGSFHKEPDGVVL*SFKAALGPAQTLLR
Trigger: ACGCAGTAAGGTCTGTGCTGGGCCAAGAGCAGCTTTGAAGCTCCAGAGAACCACCCCGTCAGGTTCCTTGTGGAAGCTCCCCTCATCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp CAACAAAGAACGCACTCCTGGCAAGCGAGTCTTTCTAGAAGACACTaGAATGGCCTCACAGGAGGGTATGGGCTCCAGGAGGGGCCCGTC +
Preference number: 1 (lower is better)
Translates to: QQRTHSWQASLSRRH*NGLTGGYGLQEGPV
Trigger: GACGGGCCCCTCCTGGAGCCCATACCCTCCTGTGAGGCCATTCCAGTGTCTTCTAGAAAGACTCGCTTGCCAGGAGTGCGTTCTTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 90 bp TCACTCGAGGGCTTCAGAGCCGCTGACCCAGCTTGCAGCTCAAAATaGGGACAAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTT +
Preference number: 1 (lower is better)
Translates to: SLEGFRAADPACSSK*GQRRFHPPSRRCWL
Trigger: AAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTTGTCCTCATTTTGAGCTGCAAGCTGGGTCAGCGGCTCTGAAGCCCTCGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp CAGGAAATCCTCTCAAAGGGGCCACTGGGAATACTGGCCACAAGGTaGAGGCTCTGCCAAGCCCAGCTCACGGTGTGGAAAAATGAACGC +
Preference number: 1 (lower is better)
Translates to: QEILSKGPLGILATR*RLCQAQLTVWKNER
Trigger: GCGTTCATTTTTCCACACCGTGAGCTGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGAGGATTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR GCA 90 bp AGAAAGCCAGGTCCAAAGTTCTCGTTTCCCTGTCTGCACATAACCTaGTCTGCTCACTCACAAACTCCAGTTCCCCTGCTCTGGGCCCAG +
Preference number: 1 (lower is better)
Translates to: RKPGPKFSFPCLHIT*SAHSQTPVPLLWAQ
Trigger: CTGGGCCCAGAGCAGGGGAACTGGAGTTTGTGAGTGAGCAGAGCAGGTTATGTGCAGACAGGGAAACGAGAACTTTGGACCTGGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp AAAGCTTGTCCCAGGCAAGGGTCAGAGATGGAAGGGGACATCTCTTaGTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAAACTA +
Preference number: 1 (lower is better)
Translates to: KACPRQGSEMEGDIS*SGTGSCLAQTVGKL
Trigger: TAGTTTTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTTCCATCTCTGACCCTTGCCTGGGACAAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp TTACCCCAGGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTaGCTGGTGATCTCAAGATGGAGACATCCCTCACTTACTCATCAG +
Preference number: 1 (lower is better)
Translates to: LPQGLWPLTWCRQLS*LVISRWRHPSLTHQ
Trigger: CTGATGAGTAAGTGAGGGATGTCTCCATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp CCTGTGGCACTGGAAGGCATATCCCACCAGAAATGGGTTTCCTGTTaGACAAAGACCAGAAATGGCCCCGCAGTATACTGGTGGATGGGA +
Preference number: 1 (lower is better)
Translates to: PVALEGISHQKWVSC*TKTRNGPAVYWWMG
Trigger: TCCCATCCACCAGTATACTGCGGGGCCATTTCTGGTCTTTGTCCAACAGGAAACCCATTTCTGGTGGGATATGCCTTCCAGTGCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp TTCTCTGGAGCTTCAAAGCTGCTCTTGGCCCAGCACAGACCTTACTaGGTTAGCATCTTCCTCAAGTCACTCGGCGGATTCCTGGAAGAT +
Preference number: 1 (lower is better)
Translates to: FSGASKLLLAQHRPY*VSIFLKSLGGFLED
Trigger: ATCTTCCAGGAATCCGCCGAGTGACTTGAGGAAGATGCTAACGCAGTAAGGTCTGTGCTGGGCCAAGAGCAGCTTTGAAGCTCCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp ATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACACAGTaGTGTAGGACCGAGGCTCACAAACATCCACATGGCACAAGCAGG +
Preference number: 1 (lower is better)
Translates to: IQVNRTSTKQMQPTQ*CRTEAHKHPHGTSR
Trigger: CCTGCTTGTGCCATGTGGATGTTTGTGAGCCTCGGTCCTACAGCACTGTGTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 90 bp TACAGGGAAGTCCAAGAACTAAAGCTGATGTGGGGACTCAGCCTCTaGAACGAGCTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGG +
Preference number: 1 (lower is better)
Translates to: YREVQELKLMWGLSL*NELKEPRIKACSPG
Trigger: CCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAGCTCGTTTCAGAGGCTGAGTCCCCACATCAGCTTTAGTTCTTGGACTTCCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp GGATTTACGGGAGGCGCCTGCAGGGACAGCCATTCTCCTAATTCTTaGTTAATACAGGGAAGTCCAAGAACTAAAGCTGATGTGGGGACT +
Preference number: 1 (lower is better)
Translates to: GFTGGACRDSHSPNS*LIQGSPRTKADVGT
Trigger: AGTCCCCACATCAGCTTTAGTTCTTGGACTTCCCTGTATTAAGCAAGAATTAGGAGAATGGCTGTCCCTGCAGGCGCCTCCCGTAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 90 bp AAGTTTCAGATTGCGCCAGAGAGCTCAGGATTTACGGGAGGCGCCTaGAGGGACAGCCATTCTCCTAATTCTTGCTTAATACAGGGAAGT +
Preference number: 1 (lower is better)
Translates to: KFQIAPESSGFTGGA*RDSHSPNSCLIQGS
Trigger: ACTTCCCTGTATTAAGCAAGAATTAGGAGAATGGCTGTCCCTGCAGGCGCCTCCCGTAAATCCTGAGCTCTCTGGCGCAATCTGAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 90 bp TTTATACAGGCATTCCACAAGCCCTTTTCCCAACAATTAGCAGTGTaGGAACGGACTAATACAGGGTGCCATCGGGAAGGACTGCAGCCA +
Preference number: 1 (lower is better)
Translates to: FIQAFHKPFSQQLAV*ERTNTGCHREGLQP
Trigger: TGGCTGCAGTCCTTCCCGATGGCACCCTGTATTAGTCCGTTCTCACACTGCTAATTGTTGGGAAAAGGGCTTGTGGAATGCCTGTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR GCA 90 bp TATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATaGAGCCTACACAGTGCTGTAGGACCGAGGCTCACAAACATCCAC +
Preference number: 1 (lower is better)
Translates to: YLWISYKSTGPARNR*SLHSAVGPRLTNIH
Trigger: GTGGATGTTTGTGAGCCTCGGTCCTACAGCACTGTGTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 90 bp AGCTCACATCAACCCTCCCATACGGTGAAACAACAGCCTAAGATCTaGAATCCCCAGGGACTAAACGAGCAGCAAAGTAAGAACCAAAAG +
Preference number: 1 (lower is better)
Translates to: SSHQPSHTVKQQPKI*NPQGLNEQQSKNQK
Trigger: CTTTTGGTTCTTACTTTGCTGCTCGTTTAGTCCCTGGGGATTTCAGATCTTAGGCTGTTGTTTCACCGTATGGGAGGGTTGATGTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 90 bp TTGCAATCACTAGATGAAGCTCCGGTTAAAGTTCTAAATCAGGAATaGCGCAGCCATGAAGTTAAAGGCATCCAGAAGGTCACCACACAC +
Preference number: 1 (lower is better)
Translates to: LQSLDEAPVKVLNQE*RSHEVKGIQKVTTH
Trigger: GTGTGTGGTGACCTTCTGGATGCCTTTAACTTCATGGCTGCGTCATTCCTGATTTAGAACTTTAACCGGAGCTTCATCTAGTGATTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 90 bp TTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTaGATTAAGAAAGTATTAAACTTCTGTACCCTGACAATAAGCAGG +
Preference number: 1 (lower is better)
Translates to: LWNSSLRSTGRSLKN*IKKVLNFCTLTISR
Trigger: CCTGCTTATTGTCAGGGTACAGAAGTTTAATACTTTCTTAATCCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CAA 90 bp CAAGCAGGGCCGGCCACTCCAGGCAAACGAAGCCACCCCCGAACCTaGCAGAGGCCGCACTCCCTCAGCAGGGGGACCACGGAGGCGACA +
Preference number: 2 (lower is better)
Translates to: QAGPATPGKRSHPRT*QRPHSLSRGTTEAT
Trigger: TGTCGCCTCCGTGGTCCCCCTGCTGAGGGAGTGCGGCCTCTGCAAGGTTCGGGGGTGGCTTCGTTTGCCTGGAGTGGCCGGCCCTGCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAGTGGCAAACGCGCAGTaGTCAGCCTGCTGCACCACG +
Preference number: 2 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPVANAQ*SACCTT
Trigger: CGTGGTGCAGCAGGCTGAGCACTGCGCGTTTGCCAC...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCATCAGAGCTGGTGCTGTaGCCTCTGCCGTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPSELVL*PLPSPQ
Trigger: CTGGGGTGACGGCAGAGGCCACAGCACCAGCTCTGA...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GCCAGGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGAACCCGTCCACCCGCTaGCCTCCAGCTCCGCAGGCT +
Preference number: 2 (lower is better)
Translates to: ARRLQFSYCPGHGGPRSRNPSTR*PPAPQA
Trigger: AGCCTGCGGAGCTGGAGGTCAGCGGGTGGACGGGTT...CCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR GCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGGAGACACCAACGCGCTaGGTGTCACGGGCAAGCGGC +
Preference number: 2 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRETPTR*VSRASG
Trigger: GCCGCTTGCCCGTGACACGCAGCGCGTTGGTGTCTC...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCAGAAGTGCGAGCAGCAGCCTCGAGGCGGCGAGGCCTGCGCCAGGTGGGCTCTATCCCAGGCAGAAGCTaGCCACGTGACCACCCCAGT +
Preference number: 2 (lower is better)
Translates to: AEVRAAASRRRGLRQVGSIPGRS*PRDHPS
Trigger: ACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGAT...AGAGCCCACCTGGCGCAGGCCTCGCCGCCTCGAGGCTGCTGCTCGCACTTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGTGGCAGCTTCCAGGGTaGCCTCTTGCCCCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPWQLPG*PLAPGH
Trigger: ATGCCCAGGGGCAAGAGGCCACCCTGGAAGCTGCCA...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGGTGCACCCTGGTGGGTaGTGGGATGCCCGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAVHPGG*WDARAV
Trigger: CACTGCCCGGGCATCCCATCACCCACCAGGGTGCAC...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGTGCCCGCCCCCACCGTaGCCCACACCCACCTTGGAA +
Preference number: 2 (lower is better)
Translates to: KGASIHLHGDAGFAGRWACPPPP*PTPTLE
Trigger: TTCCAAGGTGGGTGTGGGGCACGGTGGGGGCGGGCA...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTTGCCCGCCCCCACCGTaGCCCACACCCACCTTGGAA +
Preference number: 2 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSCPPPP*PTPTLE
Trigger: TTCCAAGGTGGGTGTGGGGCACGGTGGGGGCGGGCA...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACCAGTGGCTCTGGGCTaGAACGGGCCTGCCACCCGT +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRPVALG*NGPATR
Trigger: ACGGGTGGCAGGCCCGTTGCAGCCCAGAGCCACTGG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTGCGCCAGGTGGGCTCTaGAGGCACTTGGGGGATCGG +
Preference number: 2 (lower is better)
Translates to: LLSWARGSKVQVSPGLVPAPGGL*RHLGDR
Trigger: CCGATCCCCCAAGTGCCTGCAGAGCCCACCTGGCGC...AGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCGTCACGGGCAGCACGTaGCAAACGCGCAGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: DEHARVETGRGQGRLQLLVTGST*QTRSAQ
Trigger: CTGAGCACTGCGCGTTTGCCACGTGCTGCCCGTGAC...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCACCCACCTTGGAAGATTaGCAGCTTCCAGGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPPTLED*QLPGWP
Trigger: AGGCCACCCTGGAAGCTGCCAATCTTCCAAGGTGGG...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCTCAGAGCTGGTGCTGTaGCCTCTGCCGTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: DEHARVETGRGQGRLQLLSELVL*PLPSPQ
Trigger: CTGGGGTGACGGCAGAGGCCACAGCACCAGCTCTGA...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGGCGGCAACCCCTGCTaGCAGAGGCAGGAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRGGNPC*QRQEVC
Trigger: GCACACCTCCTGCCTCTGCCAGCAGGGGTTGCCGCC...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGCAGGGACCTGGCCCTaGCTCTGGTCTGGCGGCAAC +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRAGTWP*LWSGGN
Trigger: GTTGCCGCCAGACCAGAGCCAGGGCCAGGTCCCTGC...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACGCCACGATGCCTGCTaGGTCCTGCAGGGACAGGGG +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRRHDAC*VLQGQG
Trigger: CCCCTGTCCCTGCAGGACCCAGCAGGCATCGTGGCG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGATGTGAAGGAGGCCCATaGGACCAGGCAGGCGGCAGG +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRCEGGP*DQAGGR
Trigger: CCTGCCGCCTGCCTGGTCTCATGGGCCTCCTTCACA...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAACCCGTCCACCCGCTaGCCTCCAGCTCCGCAGGCT +
Preference number: 2 (lower is better)
Translates to: GSNSPTVLGTGVQGPGVTNPSTR*PPAPQA
Trigger: AGCCTGCGGAGCTGGAGGTCAGCGGGTGGACGGGTT...GGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGAGGGCCAGGTGGTTCTaGCAGATCCCTGCACTCACA +
Preference number: 2 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPRARWF*QIPALT
Trigger: TGTGAGTGCAGGGATCTGCCAGAACCACCTGGCCCT...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGTGGGATGGGGAGGCCTGCGCCAGGTaGGCTCTGCAGGCACTTGGG +
Preference number: 2 (lower is better)
Translates to: AWSCTSWWPPAHCGMWDGEACAR*ALQALG
Trigger: CCCAAGTGCCTGCAGAGCCCACCTGGCGCAGGCCTC...CCCATCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CAA 90 bp GTCCAGGTGTCACCAGGGCTGGTTCCTGAGGCCTCTGCCCTGGGCTaGCAGACGGCATTGCCTCCCTGTTTCCTCATGGGGCTGTCCCTC +
Preference number: 2 (lower is better)
Translates to: VQVSPGLVPEASALG*QTALPPCFLMGLSL
Trigger: GAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTGGTGACACCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR TCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACTGCAGGGGTGTGGCTaGAATCAAGGCAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRLQGCG*NQGRPG
Trigger: CCCTGGCCTGCCTTGATTTCAGCCACACCCCTGCAG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCTGTGAAGGAGGCCCATaGGACCAGGCAGGCGGCAGG +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVCEGGP*DQAGGR
Trigger: CCTGCCGCCTGCCTGGTCTCATGGGCCTCCTTCACA...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCCAGTGCTCAGCCTGCTaGACCACGGATGAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSQCSAC*TTDEGS
Trigger: GCTCCCCTCATCCGTGGTGCAGCAGGCTGAGCACTG...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCAGTGCTCAGCCTGCTaGACCACGGATGAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAQCSAC*TTDEGS
Trigger: GCTCCCCTCATCCGTGGTGCAGCAGGCTGAGCACTG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGCCGTCACCCCAGCCTaGCCAAGGGCCTGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSAVTPA*PRAWEL
Trigger: CAGCTCCCAGGCCCTTGGGCAGGCTGGGGTGACGGC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCACTTGTCAGAGCTGGTaGTGTGGCCTCTGCCGTCAC +
Preference number: 2 (lower is better)
Translates to: DEHARVETGRGQGRLQLLTCQSW*CGLCRH
Trigger: GTGACGGCAGAGGCCACAGCACCAGCTCTGACAAGT...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAAGTCTGGGGAGGGGATaGCGGACTCTGCCCGTAGAG +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRSLGRG*RTLPVE
Trigger: CTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGAGGTATCCTCCCCTGTaGTGGGAGTCCGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: KGASIHLHGDAGFAGRWARYPPL*WESGVG
Trigger: CCCCACTCCGGACTCCCAGCACAGGGGAGGATACCT...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACAGCAGGAGAGACCGTaGACCCTGGTGGGTGATGGG +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRQQERP*TLVGDG
Trigger: CCCATCACCCACCAGGGTGCACGGTCTCTCCTGCTG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGCGCCAGGTGGGCTCTaGAGGCACTTGGGGGATCGG +
Preference number: 2 (lower is better)
Translates to: LWDVGWAQSPQEPSPTGEAPGGL*RHLGDR
Trigger: CCGATCCCCCAAGTGCCTGCAGAGCCCACCTGGCGC...CTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGGGCCCAGGAGCCTTGTaGGGAAGGGAGCCGGGTTTT +
Preference number: 2 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAGPGAL*GREPGF
Trigger: AAAACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCC...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAGACGGGGTGGTTCTCTaGAGCTTCAAAGCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPDGVVL*SFKAAL
Trigger: AAGAGCAGCTTTGAAGCTCCAGAGAACCACCCCGTC...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTTCAGAGCTGGTGCTGTaGCCTCTGCCGTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSSELVL*PLPSPQ
Trigger: CTGGGGTGACGGCAGAGGCCACAGCACCAGCTCTGA...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCCCGTGTCTGACTCACTaGCTGAGGTGGGGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSPCLTH*LRWGSQ
Trigger: CTGGCTCCCCCACCTCAGCCAGTGAGTCAGACACGG...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGATCCTTCCTGCTGGTGTaGCGGCGCCCTGTAGGGACC +
Preference number: 2 (lower is better)
Translates to: IKACSPGHTARNTHCRGRSFLLV*RRPVGT
Trigger: GGTCCCTACAGGGCGCCGCCACACCAGCAGGAAGGA...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCACGAACATGCCCGGGTaGAAACGGGCCGTGGACAGG +
Preference number: 2 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSTNMPG*KRAVDR
Trigger: CCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGT...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCCATCTGAGTGCTCGGTaGACGGACACGGGAGCCGCC +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVHLSAR*TDTGAA
Trigger: GGCGGCTCCCGTGTCCGTCCACCGAGCACTCAGATG...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCACCTGGCCCTGGCTCTaGTCTGGCGGCAACCCCTGC +
Preference number: 2 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPTWPWL*SGGNPC
Trigger: GCAGGGGTTGCCGCCAGACCAGAGCCAGGGCCAGGT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCCAGCCACGCACTGTaGAGCGTGGCACAGGCCACA +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVPSHAL*SVAQAT
Trigger: TGTGGCCTGTGCCACGCTCCACAGTGCGTGGCTGGG...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CAA 90 bp CCTCTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTaGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGATGCATGGG +
Preference number: 2 (lower is better)
Translates to: PLCSHPPIRQTLGLP*LSVPALTGRTEMHG
Trigger: CCCATGCATCTCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CAA 90 bp CCAGGGCTGGTTCCTGAGGCCTCTGCCCTGGGCTTGCAGACGGCATaGCCTCCCTGTTTCCTCATGGGGCTGTCCCTCTGTGTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: PGLVPEASALGLQTA*PPCFLMGLSLCVCL
Trigger: CAGACACACACAGAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR GCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCTCCAGGGTGGCCTCTTaGCCCTGGGCATTTGGTGGG +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVSRVAS*PWAFGG
Trigger: CCCACCAAATGCCCAGGGGCAAGAGGCCACCCTGGA...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGGGCTGCAACGGGCCTaGCACCCGTGTCCTCGGAGC +
Preference number: 2 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEGLQRA*HPCPRS
Trigger: GCTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGGGGCTGCAACGGGCCTaGCACCCGTGTCCTCGGAGC +
Preference number: 2 (lower is better)
Translates to: GALASYLVQATLLPGDLKGLQRA*HPCPRS
Trigger: GCTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCC...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCAGTGGCTCTGGGCTaGAACGGGCCTGCCACCCGT +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSPVALG*NGPATR
Trigger: ACGGGTGGCAGGCCCGTTGCAGCCCAGAGCCACTGG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCAAACTCCAGTTCCCCTaGTCTGGGCCCAGGCAGGCG +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVKLQFP*SGPRQA
Trigger: CGCCTGCCTGGGCCCAGAGCAGGGGAACTGGAGTTT...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGAGGGCTGCAGGGGTGTaGCTGAAATCAAGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: KGASIHLHGDAGFAGRWARAAGV*LKSRQA
Trigger: GGCCTGCCTTGATTTCAGCCACACCCCTGCAGCCCT...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCTTCCTATCGAAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCGAGGCCTGCGCCAGGTaGGCTCTGCAGGCACTTGGG +
Preference number: 2 (lower is better)
Translates to: ASYRNRGHGLAPLGGLLPEACAR*ALQALG
Trigger: CCCAAGTGCCTGCAGAGCCCACCTGGCGCAGGCCTC...GGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGATAGGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CAA 90 bp TTCTCCCCTCTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTaGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGATG +
Preference number: 2 (lower is better)
Translates to: FSPLCSHPPIRQTLG*PLLSVPALTGRTEM
Trigger: CATCTCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAGAGGGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGCGGATTCCTGGAAGATaGCGATGGGTTACAAGAGGT +
Preference number: 2 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPRIPGR*RWVTRG
Trigger: ACCTCTTGTAACCCATCGGCATCTTCCAGGAATCCG...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCGCCGTCACCCCAGCCTaGCCAAGGGCCTGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: SKNQESKLARQGTPPVTPAVTPA*PRAWEL
Trigger: CAGCTCCCAGGCCCTTGGGCAGGCTGGGGTGACGGC...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCCAAGAATCAAAGCTTaGTCGCCAGGGCACACCGCC +
Preference number: 2 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAPRIKA*SPGHTA
Trigger: GGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGCCCTCCCAGGGCCTTaGACCGTGCACCTACTGTGG +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSALPGP*TVHLLW
Trigger: CCACAGTAGGTGCACGGTGCAAGGCCCTGGGAGGGC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCCCCCTGGGCATTTGGTaGGGCACAGAACTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSPLGIW*GTELRS
Trigger: TGACCTCAGTTCTGTGCCCCACCAAATGCCCAGGGG...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTCCCACCTTGGAAGATTaGCAGCTTCCAGGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSPTLED*QLPGWP
Trigger: AGGCCACCCTGGAAGCTGCCAATCTTCCAAGGTGGG...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAAGGACTTGTCAGAGCTaGTGCTGTGGCCTCTGCCGT +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRRTCQS*CCGLCR
Trigger: ACGGCAGAGGCCACAGCACCAGCTCTGACAAGTCCT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGTGCACACCCCAGAGCTaGGATGCAGGGCTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSCTPQS*DAGLQG
Trigger: CCCCTGCAGCCCTGCATCCCAGCTCTGGGGTGTGCA...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGAGGGACCAGTGGCTCTaGGCTGCAACGGGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSRDQWL*AATGLP
Trigger: TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCT...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAAGGGCCAGGTGGTTCTaGCAGATCCCTGCACTCACA +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRRARWF*QIPALT
Trigger: TGTGAGTGCAGGGATCTGCCAGAACCACCTGGCCCT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCTGCCCCGACACAGGTaGCCCCATCGGAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLLPRHR*PHRRAG
Trigger: TCCTGCCCTCCGATGGGGCCACCTGTGTCGGGGCAG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCGCCACGATGCCTGCTaGGTCCTGCAGGGACAGGGG +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLRHDAC*VLQGQG
Trigger: CCCCTGTCCCTGCAGGACCCAGCAGGCATCGTGGCG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCAAAGGGGCCACTGGGAATACTGGCCACAAGGTGGAGGCTCTGCCAAGCCCATCCCTGCCGGGAGTCTaGCTTTGTGGCCCATCCCAG +
Preference number: 2 (lower is better)
Translates to: LKGATGNTGHKVEALPSPSLPGV*LCGPSQ
Trigger: CTGGGATGGGCCACAAAGCCAGACTCCCGGCAGGGA...TGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp GGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCATACTGGCCACAAGGTaGAGGCTCTGCCAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: GGSNSPTVLGTGVQGPGVILATR*RLCQAQ
Trigger: CTGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTAT...GACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR TCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGGCCTGGGAAGGTCCCTaGTGCTGCACCGTGTGTCTC +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSAWEGP*CCTVCL
Trigger: GAGACACACGGTGCAGCATCAGGGACCTTCCCAGGC...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGGTCCCGCGGGTAGCTaGGAGGTCTGCAGACCGACT +
Preference number: 2 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEGPAGS*EVCRPT
Trigger: AGTCGGTCTGCAGACCTCTCAGCTACCCGCGGGACC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAGGGAGCCAGGCGCCCTaGTGCACGCTCGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKGSQAP*CTLVKT
Trigger: TGTCTTCACGAGCGTGCATCAGGGCGCCTGGCTCCC...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACGGGAGCCAGGCGCCCTaGTGCACGCTCGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDGSQAP*CTLVKT
Trigger: TGTCTTCACGAGCGTGCATCAGGGCGCCTGGCTCCC...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACGGGCTCTGCCTTCTCTaGCACCAGGCACGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDGLCLL*HQAREA
Trigger: GGCCTCTCGTGCCTGGTGTCAGAGAAGGCAGAGCCC...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACGAGACACCAACGCGCTaGGTGTCACGGGCAAGCGGC +
Preference number: 2 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDETPTR*VSRASG
Trigger: GCCGCTTGCCCGTGACACGCAGCGCGTTGGTGTCTC...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCACTCCTTCTCAGAGATaGAAAGACAGAGGCCACCCA +
Preference number: 2 (lower is better)
Translates to: DEHARVETGRGQGRLQLLTPSQR*KDRGHP
Trigger: TGGGTGGCCTCTGTCTTTGCATCTCTGAGAAGGAGT...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGATGCTGTGGCTCAATGTaGTGTCACGGGCAGCACGTG +
Preference number: 2 (lower is better)
Translates to: IKACSPGHTARNTHCRGRCCGSM*CHGQHV
Trigger: CACGTGCTGCCCGTGACAGCACATTGAGCCACAGCA...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTAGCCATCCTCCTTCCTaGTGGTGTGGCGGCGCCCTG +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLSHPPS*WCGGAL
Trigger: CAGGGCGCCGCCACACCAGCAGGAAGGAGGATGGCT...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGAGTCTGGGGAGGGGATaGCGGACTCTGCCCGTAGAG +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSSLGRG*RTLPVE
Trigger: CTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGATGGCCTCTTACCTGGTaGAGGCAACTCTCTTGCCTG +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRWPLTW*RQLSCL
Trigger: CAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCA...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGCAGGGCCTTGCACCGTaGACCTACTGTGGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSQGLAP*TYCGLC
Trigger: GCAGAGCCCACAGTAGGTGCACGGTGCAAGGCCCTG...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGAGGTATCCTCCCCTGTaGTGGGAGTCCGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSRYPPL*WESGVG
Trigger: CCCCACTCCGGACTCCCAGCACAGGGGAGGATACCT...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGCTGTCACGCCACGATaGCTGCTGGGTCCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLAVTPR*LLGPAG
Trigger: CCCTGCAGGACCCAGCAGGCATCGTGGCGTGACAGC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCGCTGGCATTTGGGGGTaGTGTTCCCACCACAGCCTT +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVAGIWG*CSHHSL
Trigger: AAGGCTGTGGTGGGAACAGCACCCCCAAATGCCAGC...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGCCACCTTCACGGAGATaGTGGCTTCGCAGGCCGGTG +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSPPSRR*WLRRPV
Trigger: CACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGG...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGGCCCAGGAGCCTTGTaGGGAAGGGAGCCGGGTTTT +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSGPGAL*GREPGF
Trigger: AAAACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGACCTGGAAGATGCCGATaGGTTACAAGAGGTCCCGCG +
Preference number: 2 (lower is better)
Translates to: IKACSPGHTARNTHCRGRPGRCR*VTRGPA
Trigger: CGCGGGACCTCTTGTAACCCATCGGCATCTTCCAGG...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGTGCACACCCCAGAGCTaGGATGCAGGGCTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: GALASYLVQATLLPGDLKCTPQS*DAGLQG
Trigger: CCCCTGCAGCCCTGCATCCCAGCTCTGGGGTGTGCA...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCCAGCCGTGGGTTCCCTaGAGACACAAACCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVQPWVP*RHKPLH
Trigger: GTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTG...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAATCCTTCCTGCTGGTGTaGCGGCGCCCTGTAGGGACC +
Preference number: 2 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKSFLLV*RRPVGT
Trigger: GGTCCCTACAGGGCGCCGCCACACCAGCAGGAAGGA...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGACTGCGTTCTCATGCTaGGTTTTTCACCAGCTCACA +
Preference number: 2 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPTAFSC*VFHQLT
Trigger: TGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGT...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCGTGGCCCTGTGGCACTaGAAGGCATATCCCACCAGA +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVVALWH*KAYPTR
Trigger: TCTGGTGGGATATGCCTTCCAGTGCCACAGGGCCAC...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCCTGCCCACTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCGGCCACTGGGAATACTaGCCACAAGGTGGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: LLPTVGCGMGPEPTRTFSGHWEY*PQGGGS
Trigger: AGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCC...GGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp CCTATCGAAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGGCGGCCCAAGGAGCCTaGCACTCCTGTCAGATCCCA +
Preference number: 2 (lower is better)
Translates to: PIETEGMVLHLLVASCPLAAQGA*HSCQIP
Trigger: TGGGATCTGACAGGAGTGCCAGGCTCCTTGGGCCGC...CAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGATAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR TCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCTGCTGCACCACGGATaGGGGGAGCTTCCACAAGGA +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSLLHHG*GELPQG
Trigger: TCCTTGTGGAAGCTCCCCTCATCCGTGGTGCAGCAG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGACAGGGAGGTCACTGCTaGGCAGAGGATGATAGGACT +
Preference number: 2 (lower is better)
Translates to: IKACSPGHTARNTHCRGRQGGHC*AEDDRT
Trigger: AGTCCTATCATCCTCTGCTCAGCAGTGACCTCCCTG...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCGGCAGGAGAACCACTTaGACCCAGGAAGCGGAGTTT +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVGRRTT*TQEAEF
Trigger: AAACTCCGCTTCCTGGGTTCAAGTGGTTCTCCTGCC...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGTCCAGGGTGGCCTCTTaGCCCTGGGCATTTGGTGGG +
Preference number: 2 (lower is better)
Translates to: GALASYLVQATLLPGDLKSRVAS*PWAFGG
Trigger: CCCACCAAATGCCCAGGGGCAAGAGGCCACCCTGGA...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACAGGAGAGACGAACATaGCCGGGTGGAAACGGGCCG +
Preference number: 2 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEQERRT*PGGNGP
Trigger: CGGCCCGTTTCCACCCGGGCATGTTCGTCTCTCCTG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTAAACATGGACACTGCTaGCCCGACACAGGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSKHGHC*PDTGGP
Trigger: GGGGCCACCTGTGTCGGGGCAGCAGTGTCCATGTTT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAATCACGCCACGATGCCTaGTGGGTCCTGCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: KGTSLALGQGPAWLRQWESRHDA*WVLQGQ
Trigger: CTGTCCCTGCAGGACCCAGCAGGCATCGTGGCGTGA...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGGAACACCCGTGTCCCTaGCGGGAGTCTGGCTTTGTG +
Preference number: 2 (lower is better)
Translates to: KQRAWSCTSWWPPAHCGMEHPCP*RESGFV
Trigger: CACAAAGCCAGACTCCCGGCAGGGACACGGGTGTTC...CATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR GCA 90 bp ACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCGTGTGTCTGTGTGTTCACACCAGCTaGCCCTTCCCTGCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: TYRTGAGGSGLNQELVCLCVHTS*PFPAAG
Trigger: CCCTGCTGCAGGGAAGGGGCAGCTGGTGTGAACACA...CAGACACACGAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR GCA 90 bp ACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCGTGTGTCTGCTCTTGGTGGCCTCCTaGCCACTGTGGGATGTGGGA +
Preference number: 2 (lower is better)
Translates to: TYRTGAGGSGLNQELVCLLLVAS*PLWDVG
Trigger: TCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAG...CAGACACACGAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGGCCCAGGAGCCTTGTaGGGAAGGGAGCCGGGTTTT +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLGPGAL*GREPGF
Trigger: AAAACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGGGAACACCCCCGAGATaGCAAACAGGGGCCCGTCTT +
Preference number: 2 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKGTPPR*QTGARL
Trigger: AAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCC...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAGGTGGGGGTACCCCTTaGAGAGTCCGCTTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKGGGTP*RVRFLG
Trigger: CCCCAAGAAGCGGACTCTCCAAGGGGTACCCCCACC...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAACCGTGTCTGACTCACTaGCTGAGGTGGGGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKPCLTH*LRWGSQ
Trigger: CTGGCTCCCCCACCTCAGCCAGTGAGTCAGACACGG...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCTCCTTCCTGCTGGTGTaGCGGCGCCCTGTAGGGACC +
Preference number: 2 (lower is better)
Translates to: LKEPRIKACSPGHTARNTSFLLV*RRPVGT
Trigger: GGTCCCTACAGGGCGCCGCCACACCAGCAGGAAGGA...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCAGGGCCAGGTGGTTCTaGCAGATCCCTGCACTCACA +
Preference number: 2 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPRARWF*QIPALT
Trigger: TGTGAGTGCAGGGATCTGCCAGAACCACCTGGCCCT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGTGGTGGCTGGCAATGTaGCACACGCCCCAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSWWLAM*HTPQSP
Trigger: TGGAGACTGGGGCGTGTGCCACATTGCCAGCCACCA...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCCGCTCCAGGCTTCCCTaGCTTAGGGCTGACAAGACT +
Preference number: 2 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPRSRLP*LRADKT
Trigger: AGTCTTGTCAGCCCTAAGCCAGGGAAGCCTGGAGCG...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAATATCCTCCCCTGTGCTaGGAGTCCGGAGTGGGGACG +
Preference number: 2 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEYPPLC*ESGVGT
Trigger: CGTCCCCACTCCGGACTCCCAGCACAGGGGAGGATA...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCACGCACTGTGGAGCGTaGCACAGGCCACACAAACTG +
Preference number: 2 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPTHCGA*HRPHKL
Trigger: CAGTTTGTGTGGCCTGTGCCACGCTCCACAGTGCGT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGGGATGCCCGGGCAGTaGCTTGGACACAGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEGMPGQ*LGHSCH
Trigger: GTGACAGCTGTGTCCAAGCCACTGCCCGGGCATCCC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCCCTGGGCTTGCAGACGGCATTGCCTCCCTGTTTCCTCATGGGGCTGTCCCTCGCCCAGCTCACGGTGTaGAAAAATGAACGCACCTTG +
Preference number: 2 (lower is better)
Translates to: ALGLQTALPPCFLMGLSLAQLTV*KNERTL
Trigger: CAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGC...GAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp GGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCTCTCAAAGGGGCCACTaGGAATACTGGCCACAAGGT +
Preference number: 2 (lower is better)
Translates to: GGSNSPTVLGTGVQGPGVSQRGH*EYWPQG
Trigger: ACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGA...GACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR TCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGACTGCAGGGGTGTGGCTaGAATCAAGGCAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRLQGCG*NQGRPG
Trigger: CCCTGGCCTGCCTTGATTTCAGCCACACCCCTGCAG...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCAAGGAGTCCCACACCTaGCACTGCGTTCTCATGCTG +
Preference number: 2 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPKESHT*HCVLML
Trigger: CAGCATGAGAACGCAGTGTCAGGTGTGGGACTCCTT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCTCTCCTGGTTCGGCTaGTACAGCCAAAGAAAACAG +
Preference number: 2 (lower is better)
Translates to: KGASIHLHGDAGFAGRWALSWFG*YSQRKQ
Trigger: CTGTTTTCTTTGGCTGTATCAGCCGAACCAGGAGAG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCTCTGCCCGTAGAGGCTaGCAATTTCCACAAAAGCCC +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVSARRG*QFPQKP
Trigger: GGGCTTTTGTGGAAATTGTCAGCCTCTACGGGCAGA...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTACTCCTTCTCAGAGATaGAAAGACAGAGGCCACCCA +
Preference number: 2 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSTPSQR*KDRGHP
Trigger: TGGGTGGCCTCTGTCTTTGCATCTCTGAGAAGGAGT...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCAGTGCTCAGCCTGCTaGACCACGGATGAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: LKEPRIKACSPGHTARNTQCSAC*TTDEGS
Trigger: GCTCCCCTCATCCGTGGTGCAGCAGGCTGAGCACTG...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCCAGTGGCTCTGGGCTaGAACGGGCCTGCCACCCGT +
Preference number: 2 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAPVALG*NGPATR
Trigger: ACGGGTGGCAGGCCCGTTGCAGCCCAGAGCCACTGG...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGACACTGCGTTCTCATaGTGGGTTTTTCACCAGCTC +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRDTAFS*WVFHQL
Trigger: GAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTC...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCAAGAATCAAAGCTTaGTCGCCAGGGCACACCGCC +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSPRIKA*SPGHTA
Trigger: GGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCATAGGGAAACCCACTaGCAATGCCCAAGGTTACCT +
Preference number: 2 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAHRETH*QCPRLP
Trigger: AGGTAACCTTGGGCATTGGCAGTGGGTTTCCCTATG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAAAACATGGACACTGCTaGCCCGACACAGGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEKHGHC*PDTGGP
Trigger: GGGGCCACCTGTGTCGGGGCAGCAGTGTCCATGTTT...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACCGAGATCACACCACTaGACGCCAGCCTGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEPRSHH*TPAWVS
Trigger: TGACACCCAGGCTGGCGTGCAGTGGTGTGATCTCGG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGAAGGGGACATCTCTTaGTCTGGGACAGGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSEGDIS*SGTGSC
Trigger: GCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTTC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGACAGGTTCTCCCAGCTaGTCGACACGCTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSTGSPS*STRCGM
Trigger: CATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGT...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTTCTTACAAGGACACCAAGCAGCTTGGATCAGGGCCCACCCAGAGCCCTGATGATCCCAGGCAGAAGCTaGCCACGTGACCACCCCAGT +
Preference number: 2 (lower is better)
Translates to: LLTRTPSSLDQGPPRALMIPGRS*PRDHPS
Trigger: ACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGAT...CATCAGGGCTCTGGGTGGGCCCTGATCCAAGCTGCTTGGTGTCCTTGTAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCGGAACACCCCCGAGATaGCAAACAGGGGCCCGTCTT +
Preference number: 2 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRGTPPR*QTGARL
Trigger: AAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCC...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAGACGGGGTGGTTCTCTaGAGCTTCAAAGCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: IKACSPGHTARNTHCRGRDGVVL*SFKAAL
Trigger: AAGAGCAGCTTTGAAGCTCCAGAGAACCACCCCGTC...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCGTCACGGGCAGCACGTaGCAAACGCGCAGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: SKNQESKLARQGTPPVTPVTGST*QTRSAQ
Trigger: CTGAGCACTGCGCGTTTGCCACGTGCTGCCCGTGAC...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCTGGCAGCTTCCAGGGTaGCCTCTTGCCCCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: SKNQESKLARQGTPPVTPWQLPG*PLAPGH
Trigger: ATGCCCAGGGGCAAGAGGCCACCCTGGAAGCTGCCA...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTAGGACTTGTCAGAGCTaGTGCTGTGGCCTCTGCCGT +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSRTCQS*CCGLCR
Trigger: ACGGCAGAGGCCACAGCACCAGCTCTGACAAGTCCT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACTTTCTAGAAGACACTaGAATGGCCTCACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRLSRRH*NGLTGG
Trigger: CCCTCCTGTGAGGCCATTCCAGTGTCTTCTAGAAAG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCCTGCACTCACATACTaGGGAGGCCGCCTCCCCGCC +
Preference number: 2 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAPALTY*GGRLPA
Trigger: GGCGGGGAGGCGGCCTCCCCAGTATGTGAGTGCAGG...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGGCTCCAGCTGCTCCGTaGTTTGACAGCAGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSAPAAP*FDSRQS
Trigger: AGACTGCCTGCTGTCAAACCACGGAGCAGCTGGAGC...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTTTACCCCAGGGGCTTTaGCCTCTTACCTGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSLPQGL*PLTWCR
Trigger: CCTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAA...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CAAGCCCAGCTCACGGTGTGGAAAAATGAACGCACCTTGTGGTACGGCCTCAAGGGCTCTGCAGGCACTTaGGGGATCGGCTTTCCCACC +
Preference number: 2 (lower is better)
Translates to: QAQLTVWKNERTLWYGLKGSAGT*GIGFPT
Trigger: GGTGGGAAAGCCGATCCCCCAAGTGCCTGCAGAGCC...CTTGAGGCCGTACCACAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp CCTATCGAAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGCTGTCCCATCCCCTCTaGCTCTACACTCCGAAAGCC +
Preference number: 2 (lower is better)
Translates to: PIETEGMVLHLLVASCPLLSHPL*LYTPKA
Trigger: GGCTTTCGGAGTGTAGAGCCAGAGGGGATGGGACAG...CAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp TACAGGGTGCCATCGGGAAGGACTGCAGCCAGGCGGCTCCAATTCTCCTACTGTTGGTCTTGCACCTCTTaGTGGCCTCCTGCCCACTGT +
Preference number: 2 (lower is better)
Translates to: YRVPSGRTAARRLQFSYCWSCTS*WPPAHC
Trigger: ACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCA...ACAGTAGGAGAATTGGAGCCGCCTGGCTGCAGTCCTTCCCGATGGCACCCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CAA 90 bp AGCTTTCCTGGTGGCTGGCAATGTGGCACACGCCCCAGTCTCCACTaGGCAGTGAGGGTATTTCCAGTTAAACGCCCTACAGAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: SFPGGWQCGTRPSLH*AVRVFPVKRPTEGQ
Trigger: CTGGCCCTCTGTAGGGCGTTTAACTGGAAATACCCTCACTGCCAAGTGGAGACTGGGGCGTGTGCCACATTGCCAGCCACCAGGAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CAA 90 bp AGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGAGCTaGACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACT +
Preference number: 2 (lower is better)
Translates to: RRGFRHLMGTYDGSS*TQVLPAARHAVGCT
Trigger: AGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAAACCCTCCCATACGGTaGAACAACAGCCTAAGATCT +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRNPPIR*NNSLRS
Trigger: AGATCTTAGGCTGTTGTTTCACCGTATGGGAGGGTT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAACTTCCACAAGGAACCTaGCGGGGTGGTTCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKLPQGT*RGGSLE
Trigger: CTCCAGAGAACCACCCCGTCAGGTTCCTTGTGGAAG...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGACCTGATGCACGCTCGTaGAGACATTCAGAACGAACA +
Preference number: 2 (lower is better)
Translates to: IKACSPGHTARNTHCRGRPDARS*RHSERT
Trigger: TGTTCGTTCTGAATGTCTTCACGAGCGTGCATCAGG...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGGGAGCCAGGCGCCCTaGTGCACGCTCGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAGSQAP*CTLVKT
Trigger: TGTCTTCACGAGCGTGCATCAGGGCGCCTGGCTCCC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGGTCTCCACTTGGCAGTaGGGGTATTTCCAGTTAAAC +
Preference number: 2 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAVSTWQ*GYFQLN
Trigger: GTTTAACTGGAAATACCCTCACTGCCAAGTGGAGAC...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGAAGGAGTCCCACACCTaGCACTGCGTTCTCATGCTG +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSKESHT*HCVLML
Trigger: CAGCATGAGAACGCAGTGTCAGGTGTGGGACTCCTT...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTAAGGAGTCCCACACCTaGCACTGCGTTCTCATGCTG +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSKESHT*HCVLML
Trigger: CAGCATGAGAACGCAGTGTCAGGTGTGGGACTCCTT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAACTCCTTCTCAGAGATaGAAAGACAGAGGCCACCCA +
Preference number: 2 (lower is better)
Translates to: IKACSPGHTARNTHCRGRTPSQR*KDRGHP
Trigger: TGGGTGGCCTCTGTCTTTGCATCTCTGAGAAGGAGT...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCTGGAGCTTCAAAGCTaGTCTTGGCCCAGCACAGAC +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSLELQS*SWPSTD
Trigger: GTCTGTGCTGGGCCAAGAGCAGCTTTGAAGCTCCAG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGTTTACGGGAGGCGCCTaGAGGGACAGCCATTCTCCT +
Preference number: 2 (lower is better)
Translates to: GALASYLVQATLLPGDLKFTGGA*RDSHSP
Trigger: AGGAGAATGGCTGTCCCTGCAGGCGCCTCCCGTAAA...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCCATAGGGAAACCCACTaGCAATGCCCAAGGTTACCT +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVHRETH*QCPRLP
Trigger: AGGTAACCTTGGGCATTGGCAGTGGGTTTCCCTATG...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGAAGGGGACATCTCTTaGTCTGGGACAGGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLEGDIS*SGTGSC
Trigger: GCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTTC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGCCTGGAAGATGCCGATaGGTTACAAGAGGTCCCGCG +
Preference number: 2 (lower is better)
Translates to: GALASYLVQATLLPGDLKPGRCR*VTRGPA
Trigger: CGCGGGACCTCTTGTAACCCATCGGCATCTTCCAGG...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACCCCTGGGCATTTGGTaGGGCACAGAACTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEPLGIW*GTELRS
Trigger: TGACCTCAGTTCTGTGCCCCACCAAATGCCCAGGGG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGCCCACCTTGGAAGATTaGCAGCTTCCAGGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: GALASYLVQATLLPGDLKPTLED*QLPGWP
Trigger: AGGCCACCCTGGAAGCTGCCAATCTTCCAAGGTGGG...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGGCCTATAGCTATACCTaGGGGGACCCCAAACTCTGG +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSAYSYT*GDPKLW
Trigger: CCAGAGTTTGGGGTCCCCCCAGGTATAGCTATAGGC...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCATTTCTCTCCAGCCGTaGGTTCCCTGGAGACACAAA +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVISLQP*VPWRHK
Trigger: TTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAAT...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACAAAGAACGCACTCCTaGCAAGCGAGTCTTTCTAGA +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRQRTHS*QASLSR
Trigger: TCTAGAAAGACTCGCTTGCCAGGAGTGCGTTCTTTG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACCGGAGCCAGGAAACATaGCTGCGAAACCCGTGTCTG +
Preference number: 2 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDRSQET*LRNPCL
Trigger: CAGACACGGGTTTCGCAGCCATGTTTCCTGGCTCCG...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAATAAGCAGGCGATGTTaGACCAGTATAGCTGTCACC +
Preference number: 2 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRISRRC*TSIAVT
Trigger: GGTGACAGCTATACTGGTCCAACATCGCCTGCTTAT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCAGATATTCAGGGCGAAACAGTGAAAGGGAGGCAGTGCGTCACAGGCGTAATCTCCCTGCCGGGAGTCTaGCTTTGTGGCCCATCCCAG +
Preference number: 2 (lower is better)
Translates to: ADIQGETVKGRQCVTGVISLPGV*LCGPSQ
Trigger: CTGGGATGGGCCACAAAGCCAGACTCCCGGCAGGGA...GATTACGCCTGTGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAATATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp CTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGCCCAGCTCACGGTGTaGAAAAATGAACGCACCTTG +
Preference number: 2 (lower is better)
Translates to: LWDVGWAQSPQEPSPTGEAQLTV*KNERTL
Trigger: CAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGC...CTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp GCAGATATTCAGGGCGAAACAGTGAAAGGGAGGCAGTGCGTCACAGGCGTAATCAGGTGTCACCAGGGCTaGTTCCTGAGGCCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: ADIQGETVKGRQCVTGVIRCHQG*FLRPLP
Trigger: GGGCAGAGGCCTCAGGAACCAGCCCTGGTGACACCT...GATTACGCCTGTGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAATATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR TCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACTGGCAGAATTCTTCCTaGCCCCAACCGTTACCACCC +
Preference number: 2 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDWQNSS*PQPLPP
Trigger: GGGTGGTAACGGTTGGGGTCAGGAAGAATTCTGCCA...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAGTCTGCAGACCGACTTaGATTTGCTGGGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRVCRPT*ICWGLG
Trigger: TCCCAGGCCCCAGCAAATTCAAGTCGGTCTGCAGAC...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCTGCTGCACCACGGATaGGGGGAGCTTCCACAAGGA +
Preference number: 2 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDLLHHG*GELPQG
Trigger: TCCTTGTGGAAGCTCCCCTCATCCGTGGTGCAGCAG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTGCAGGGGTGTGGCTaGAATCAAGGCAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLALQGCG*NQGRPG
Trigger: CCCTGGCCTGCCTTGATTTCAGCCACACCCCTGCAG...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCGGTTACCTTCCTGGATaGGAAACTGAAACTGAAGGC +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVGYLPG*ETETEG
Trigger: GCCTTCAGTTTCAGTTTCTCATCCAGGAAGGTAACC...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGGCAGGAGAACCACTTaGACCCAGGAAGCGGAGTTT +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLGRRTT*TQEAEF
Trigger: AAACTCCGCTTCCTGGGTTCAAGTGGTTCTCCTGCC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCAGACGAGTCGCACACTaGAAAAAGTCCCCTAGAAGG +
Preference number: 2 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPRRVAH*KKSPRR
Trigger: CCTTCTAGGGGACTTTTTTCAGTGTGCGACTCGTCT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCACTTGTCAGAGCTGGTaGTGTGGCCTCTGCCGTCAC +
Preference number: 2 (lower is better)
Translates to: LKEPRIKACSPGHTARNTTCQSW*CGLCRH
Trigger: GTGACGGCAGAGGCCACAGCACCAGCTCTGACAAGT...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACGTTCTGGCAGATCCCTaGACTCACATACTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDVLADP*THILGR
Trigger: CCTCCCCAGTATGTGAGTGCAGGGATCTGCCAGAAC...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAAGGTTCTTTCCCCCATaGTATACGTGCTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: IKACSPGHTARNTHCRGRRFFPP*YTCSWC
Trigger: ACACCAAGAGCACGTATAGCATGGGGGAAAGAACCT...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCAGATATTCAGGGCGAAACAGTGAAAGGGAGGCAGTGCGTCACAGGCGTAATCGAACACCCGTGTCCCTaGCGGGAGTCTGGCTTTGTG +
Preference number: 2 (lower is better)
Translates to: ADIQGETVKGRQCVTGVIEHPCP*RESGFV
Trigger: CACAAAGCCAGACTCCCGGCAGGGACACGGGTGTTC...GATTACGCCTGTGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAATATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR GCA 90 bp GTATCTTTAACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCCTCTTGGTGGCCTCCTaGCCACTGTGGGATGTGGGA +
Preference number: 2 (lower is better)
Translates to: VSLTYRTGAGGSGLNQELLLVAS*PLWDVG
Trigger: TCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAG...GAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGTTAAAGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR CCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACCACTCGGCGGATTCCTaGAAGATGCCGATGGGTTAC +
Preference number: 2 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDHSADS*KMPMGY
Trigger: GTAACCCATCGGCATCTTCCAGGAATCCGCCGAGTG...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCCTGCACTCACATACTaGGGAGGCCGCCTCCCCGCC +
Preference number: 2 (lower is better)
Translates to: FSDTRHERPELNHIAFIVPALTY*GGRLPA
Trigger: GGCGGGGAGGCGGCCTCCCCAGTATGTGAGTGCAGG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGAAAAGCTTTCCTGGTaGCTGGCAATGTGGCACACG +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSEKLSW*LAMWHT
Trigger: CGTGTGCCACATTGCCAGCCACCAGGAAAGCTTTTC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCAAAGAAAAGCTTTCCTaGTGGCTGGCAATGTGGCAC +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVKEKLS*WLAMWH
Trigger: GTGCCACATTGCCAGCCACCAGGAAAGCTTTTCTTT...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCACACAGCTCTCACCTaGACTCAGAAAGCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLHTALT*TQKARS
Trigger: GGACCTGGCTTTCTGAGTCCAGGTGAGAGCTGTGTG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp TACAGGGTGCCATCGGGAAGGACTGCAGCCAGGCGGCTCCAATTCTCCTACTGTAATGAACGCACCTTGTaGTACGGCCTCAAGGAACGG +
Preference number: 2 (lower is better)
Translates to: YRVPSGRTAARRLQFSYCNERTL*YGLKER
Trigger: CCGTTCCTTGAGGCCGTACCACAAGGTGCGTTCATT...ACAGTAGGAGAATTGGAGCCGCCTGGCTGCAGTCCTTCCCGATGGCACCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp ACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCGTGTGTCTGTCGAAACAGAGGGCATaGTCTTGCACCTCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: TYRTGAGGSGLNQELVCLSKQRA*SCTSWW
Trigger: CCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGA...CAGACACACGAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR TCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCTGGCACGTTTCACAATaGAGACCAGCAGATGCCGGA +
Preference number: 2 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRWHVSQ*RPADAG
Trigger: TCCGGCATCTGCTGGTCTTCATTGTGAAACGTGCCA...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTTGGCACGTTTCACAATaGAGACCAGCAGATGCCGGA +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLWHVSQ*RPADAG
Trigger: TCCGGCATCTGCTGGTCTTCATTGTGAAACGTGCCA...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACGTCTGCAGACCGACTTaGATTTGCTGGGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDVCRPT*ICWGLG
Trigger: TCCCAGGCCCCAGCAAATTCAAGTCGGTCTGCAGAC...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCAGGGAGGTCACTGCTaGGCAGAGGATGATAGGACT +
Preference number: 2 (lower is better)
Translates to: LKEPRIKACSPGHTARNTQGGHC*AEDDRT
Trigger: AGTCCTATCATCCTCTGCTCAGCAGTGACCTCCCTG...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACTCTGCCCGTAGAGGCTaGCAATTTCCACAAAAGCCC +
Preference number: 2 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDSARRG*QFPQKP
Trigger: GGGCTTTTGTGGAAATTGTCAGCCTCTACGGGCAGA...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTGAGACACCAACGCGCTaGGTGTCACGGGCAAGCGGC +
Preference number: 2 (lower is better)
Translates to: FSDTRHERPELNHIAFIVETPTR*VSRASG
Trigger: GCCGCTTGCCCGTGACACGCAGCGCGTTGGTGTCTC...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCAGGTTCTTTCCCCCATaGTATACGTGCTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPRFFPP*YTCSWC
Trigger: ACACCAAGAGCACGTATAGCATGGGGGAAAGAACCT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGACACTGCGTTCTCATaGTGGGTTTTTCACCAGCTC +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSDTAFS*WVFHQL
Trigger: GAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCAGAGAAGTTTCAGATTaGGCCAGAGAGCTCAGGATT +
Preference number: 2 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVREVSD*ARELRI
Trigger: AATCCTGAGCTCTCTGGCGCAATCTGAAACTTCTCT...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGAAAAGAGCTCCAGCTaGCAGAACACTCTCAACCTC +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSEKSSS*QNTLNL
Trigger: GAGGTTGAGAGTGTTCTGGCAGCTGGAGCTCTTTTC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCAGCCGTGGGTTCCCTaGAGACACAAACCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDQPWVP*RHKPLH
Trigger: GTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGACCTGCACTCACATACTaGGGAGGCCGCCTCCCCGCC +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRPALTY*GGRLPA
Trigger: GGCGGGGAGGCGGCCTCCCCAGTATGTGAGTGCAGG...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCAAAGAAAAGCTTTCCTaGTGGCTGGCAATGTGGCAC +
Preference number: 2 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPKEKLS*WLAMWH
Trigger: GTGCCACATTGCCAGCCACCAGGAAAGCTTTTCTTT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCTTTGGCCTCTTACCTaGTGCAGGCAACTCTCTTGC +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLLWPLT*CRQLSC
Trigger: GCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTACAGGCCACACAAACTaGCTCCTACCACCTAACAGA +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSTGHTN*LLPPNR
Trigger: TCTGTTAGGTGGTAGGAGCCAGTTTGTGTGGCCTGT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGAAATGGGTTTCCTGTTaGACAAAGACCAGAAATGGC +
Preference number: 2 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAKWVSC*TKTRNG
Trigger: GCCATTTCTGGTCTTTGTCCAACAGGAAACCCATTT...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GTATCTTTAACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCGGCCACTGGGAATACTaGCCACAAGGTGGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: VSLTYRTGAGGSGLNQELGHWEY*PQGGGS
Trigger: AGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCC...GAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGTTAAAGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CAA 90 bp CCCTGTGGCACTGGAAGGCATATCCCACCAGAAATGGGTTTCCTGTaGGACAAAGACCAGAAATGGCCCCGCAGTATACTGGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: PCGTGRHIPPEMGFL*DKDQKWPRSILVDG
Trigger: CCCATCCACCAGTATACTGCGGGGCCATTTCTGGTCTTTGTCCAACAGGAAACCCATTTCTGGTGGGATATGCCTTCCAGTGCCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAGGTCCCGCGGGTAGCTaGGAGGTCTGCAGACCGACT +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRGPAGS*EVCRPT
Trigger: AGTCGGTCTGCAGACCTCTCAGCTACCCGCGGGACC...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAACCTGATGCACGCTCGTaGAGACATTCAGAACGAACA +
Preference number: 2 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKPDARS*RHSERT
Trigger: TGTTCGTTCTGAATGTCTTCACGAGCGTGCATCAGG...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGGTCTCCACTTGGCAGTaGGGGTATTTCCAGTTAAAC +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSVSTWQ*GYFQLN
Trigger: GTTTAACTGGAAATACCCTCACTGCCAAGTGGAGAC...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCTGGAGCTTCAAAGCTaGTCTTGGCCCAGCACAGAC +
Preference number: 2 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDLELQS*SWPSTD
Trigger: GTCTGTGCTGGGCCAAGAGCAGCTTTGAAGCTCCAG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTGCCCGTAACACCCACTaGAGGGGCAGAAGGAGTCCC +
Preference number: 2 (lower is better)
Translates to: FSDTRHERPELNHIAFIVARNTH*RGRRSP
Trigger: GGGACTCCTTCTGCCCCTGCAGTGGGTGTTACGGGC...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGAAAAGAGCTCCAGCTaGCAGAACACTCTCAACCTC +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLEKSSS*QNTLNL
Trigger: GAGGTTGAGAGTGTTCTGGCAGCTGGAGCTCTTTTC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCTCGTGTGTCTGTCCACAGTCCAGTGCTTCGAAGGAATGTCTTTCTCCTTGAACTCTTGGTGGCCTCCTaGCCACTGTGGGATGTGGGA +
Preference number: 2 (lower is better)
Translates to: ARVSVHSPVLRRNVFLLELLVAS*PLWDVG
Trigger: TCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAG...TTCAAGGAGAAAGACATTCCTTCGAAGCACTGGACTGTGGACAGACACACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCACTCGGCGGATTCCTaGAAGATGCCGATGGGTTAC +
Preference number: 2 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDHSADS*KMPMGY
Trigger: GTAACCCATCGGCATCTTCCAGGAATCCGCCGAGTG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGATGCACACCCCAGAGCTaGGATGCAGGGCTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRCTPQS*DAGLQG
Trigger: CCCCTGCAGCCCTGCATCCCAGCTCTGGGGTGTGCA...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGCTTTCTAGAAGACACTaGAATGGCCTCACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: GALASYLVQATLLPGDLKLSRRH*NGLTGG
Trigger: CCCTCCTGTGAGGCCATTCCAGTGTCTTCTAGAAAG...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGCAAAGAACGCACTCCTaGCAAGCGAGTCTTTCTAGA +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSQRTHS*QASLSR
Trigger: TCTAGAAAGACTCGCTTGCCAGGAGTGCGTTCTTTG...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGCTCCAGCTGCTCCGTaGTTTGACAGCAGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAAPAAP*FDSRQS
Trigger: AGACTGCCTGCTGTCAAACCACGGAGCAGCTGGAGC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAGGTGGAAACGGGCCGTaGACAGGGCAGGCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRGGNGP*TGQAPA
Trigger: AGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACC...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACGCCCTGGCTCTGGTCTaGCGGCAACCCCTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYALALV*RQPLLA
Trigger: TGCCAGCAGGGGTTGCCGCCAGACCAGAGCCAGGGC...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCATTTACAGATGAAGGCTCTGCAGGCACTTaGGGGATCGGCTTTCCCACC +
Preference number: 2 (lower is better)
Translates to: QQGRALGSCVQLIPFTDEGSAGT*GIGFPT
Trigger: GGTGGGAAAGCCGATCCCCCAAGTGCCTGCAGAGCC...TTCATCTGTAAATGGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CAA 90 bp ACAAGGAACCTGACGGGGTGGTTCTCTGGAGCTTCAAAGCTGCTCTaGGCCCAGCACAGACCTTACTGCGTTAGCATCTTCCTCAAGTCA +
Preference number: 2 (lower is better)
Translates to: TRNLTGWFSGASKLL*AQHRPYCVSIFLKS
Trigger: TGACTTGAGGAAGATGCTAACGCAGTAAGGTCTGTGCTGGGCCAAGAGCAGCTTTGAAGCTCCAGAGAACCACCCCGTCAGGTTCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CAA 90 bp GTTACCCCAGGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTaGCCTGGTGATCTCAAGATGGAGACATCCCTCACTTACTCATCA +
Preference number: 2 (lower is better)
Translates to: VTPGALASYLVQATL*PGDLKMETSLTYSS
Trigger: TGATGAGTAAGTGAGGGATGTCTCCATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACTGGCACGTTTCACAATaGAGACCAGCAGATGCCGGA +
Preference number: 2 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDWHVSQ*RPADAG
Trigger: TCCGGCATCTGCTGGTCTTCATTGTGAAACGTGCCA...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GTATCTTTAACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCCACGGTGTGGAAAAATaGACGCACCTTGTGGTACGG +
Preference number: 2 (lower is better)
Translates to: VSLTYRTGAGGSGLNQELHGVEK*THLVVR
Trigger: CCGTACCACAAGGTGCGTTCATTTTTCCACACCGTG...GAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGTTAAAGATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR GCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGACGGATTCCTGGAAGATaGCGATGGGTTACAAGAGGT +
Preference number: 2 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRRIPGR*RWVTRG
Trigger: ACCTCTTGTAACCCATCGGCATCTTCCAGGAATCCG...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAACAGCACAGACCTTACTaGGTTAGCATCTTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKQHRPY*VSIFLK
Trigger: CTTGAGGAAGATGCTAACGCAGTAAGGTCTGTGCTG...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACAGCACAGACCTTACTaGGTTAGCATCTTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEQHRPY*VSIFLK
Trigger: CTTGAGGAAGATGCTAACGCAGTAAGGTCTGTGCTG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGTTCTGGCAGATCCCTaGACTCACATACTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAVLADP*THILGR
Trigger: CCTCCCCAGTATGTGAGTGCAGGGATCTGCCAGAAC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAAGTCTGGGGAGGGGATaGCGGACTCTGCCCGTAGAG +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRSLGRG*RTLPVE
Trigger: CTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAGCCACCAGGGGCCTCTaGCGAAGTCAGGAGAGACGA +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRATRGL*RSQERR
Trigger: TCGTCTCTCCTGACTTCGGCAGAGGCCCCTGGTGGC...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCACTCGGCGGATTCCTaGAAGATGCCGATGGGTTAC +
Preference number: 2 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAHSADS*KMPMGY
Trigger: GTAACCCATCGGCATCTTCCAGGAATCCGCCGAGTG...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGCCTATAGCTATACCTaGGGGGACCCCAAACTCTGG +
Preference number: 2 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAAYSYT*GDPKLW
Trigger: CCAGAGTTTGGGGTCCCCCCAGGTATAGCTATAGGC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTAGGGCTGCAGGGGTGTaGCTGAAATCAAGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: FSDTRHERPELNHIAFIVRAAGV*LKSRQA
Trigger: GGCCTGCCTTGATTTCAGCCACACCCCTGCAGCCCT...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCCCCTGTAGGGACCAGTaGCTCTGGGCTGCAACGGGC +
Preference number: 2 (lower is better)
Translates to: TKINSNLDPSHRETHCQCPCRDQ*LWAATG
Trigger: GCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGG...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACAAAGAAAAGCTTTCCTaGTGGCTGGCAATGTGGCAC +
Preference number: 2 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDKEKLS*WLAMWH
Trigger: GTGCCACATTGCCAGCCACCAGGAAAGCTTTTCTTT...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTACTGCGTTCTCATGCTaGGTTTTTCACCAGCTCACA +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLTAFSC*VFHQLT
Trigger: TGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGT...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCGGTGGAAACGGGCCGTaGACAGGGCAGGCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: TKINSNLDPSHRETHCQCGGNGP*TGQAPA
Trigger: AGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACC...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCTGGTGATCTCAAGATaGAGACATCCCTCACTTACT +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSLVISR*RHPSLT
Trigger: AGTAAGTGAGGGATGTCTCCATCTTGAGATCACCAG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTCCGGGCAGTGGACTTaGCCTCCCACAGCCACCCTC +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYSGQWT*PPTATL
Trigger: GAGGGTGGCTGTGGGAGGCCAAGTCCACTGCCCGGA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACCCCAGCCACGCACTGTaGAGCGTGGCACAGGCCACA +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYPSHAL*SVAQAT
Trigger: TGTGGCCTGTGCCACGCTCCACAGTGCGTGGCTGGG...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCTCGTGTGTCTGTCCACAGTCCAGTGCTTCGAAGGAATGTCTTTCTCCTTGAACTGTCCCATCCCCTCTaGCTCTACACTCCGAAAGCC +
Preference number: 2 (lower is better)
Translates to: ARVSVHSPVLRRNVFLLELSHPL*LYTPKA
Trigger: GGCTTTCGGAGTGTAGAGCCAGAGGGGATGGGACAG...TTCAAGGAGAAAGACATTCCTTCGAAGCACTGGACTGTGGACAGACACACGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CCA 90 bp GTATCTTTAACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCTCGAAACAGAGGGCATaGTCTTGCACCTCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: VSLTYRTGAGGSGLNQELSKQRA*SCTSWW
Trigger: CCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGA...GAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGTTAAAGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR TCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACGCCTGGGAAGGTCCCTaGTGCTGCACCGTGTGTCTC +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYAWEGP*CCTVCL
Trigger: GAGACACACGGTGCAGCATCAGGGACCTTCCCAGGC...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAAGCTGCTCCGTGGTTTaGCAGCAGGCAGTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRSCSVV*QQAVWG
Trigger: TCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCT...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGCTGGAGTCAGAAACTaGGGTGCTGTCTATAAAAAT +
Preference number: 2 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSAGVRN*GAVYKN
Trigger: ATTTTTATAGACAGCACCTCAGTTTCTGACTCCAGC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCGGATTCCTGGAAGATaGCGATGGGTTACAAGAGGT +
Preference number: 2 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDRIPGR*RWVTRG
Trigger: ACCTCTTGTAACCCATCGGCATCTTCCAGGAATCCG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGTGTCCTGTCTACAAATaGTGTGGCTCAATGTGCTGT +
Preference number: 2 (lower is better)
Translates to: GALASYLVQATLLPGDLKCPVYK*CGSMCC
Trigger: ACAGCACATTGAGCCACAGCATTTGTAGACAGGACA...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTCCAGGGTGGCCTCTTaGCCCTGGGCATTTGGTGGG +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYSRVAS*PWAFGG
Trigger: CCCACCAAATGCCCAGGGGCAAGAGGCCACCCTGGA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGGGGCTGCAACGGGCCTaGCACCCGTGTCCTCGGAGC +
Preference number: 2 (lower is better)
Translates to: DFKKDPIVEFILTVYREKGLQRA*HPCPRS
Trigger: GCTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCC...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCAGGTTCTTTCCCCCATaGTATACGTGCTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: SKNQESKLARQGTPPVTPRFFPP*YTCSWC
Trigger: ACACCAAGAGCACGTATAGCATGGGGGAAAGAACCT...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGAAACCCACTGCCAATaGCCAAGGTTACCTTCCTGG +
Preference number: 2 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAETHCQ*PRLPSW
Trigger: CCAGGAAGGTAACCTTGGGCATTGGCAGTGGGTTTC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACGCCAGCACCTGCACCTaGCAGGCAGGAACACACGAC +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYASTCT*QAGTHD
Trigger: GTCGTGTGTTCCTGCCTGGCAGGTGCAGGTGCTGGC...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGATGGTGGCTGGCAATGTaGCACACGCCCCAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRWWLAM*HTPQSP
Trigger: TGGAGACTGGGGCGTGTGCCACATTGCCAGCCACCA...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTATCCTCCCCTGTGCTaGGAGTCCGGAGTGGGGACG +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYYPPLC*ESGVGT
Trigger: CGTCCCCACTCCGGACTCCCAGCACAGGGGAGGATA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CAA 90 bp GTGTGTCTGTCCACAGTCCAGTGCTTCGAAGGAATGTCTTTCTCCTaGAACACGGTGTTTACAGATAAGACAGCAGGTCTCGCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: VCLSTVQCFEGMSFS*NTVFTDKTAGLALS
Trigger: GCTCAGGGCGAGACCTGCTGTCTTATCTGTAAACACCGTGTTCAAGGAGAAAGACATTCCTTCGAAGCACTGGACTGTGGACAGACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR TCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAGTCTGCAGACCGACTTaGATTTGCTGGGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRVCRPT*ICWGLG
Trigger: TCCCAGGCCCCAGCAAATTCAAGTCGGTCTGCAGAC...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGACTTCCACAAGGAACCTaGCGGGGTGGTTCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRLPQGT*RGGSLE
Trigger: CTCCAGAGAACCACCCCGTCAGGTTCCTTGTGGAAG...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACCTGCTGCACCACGGATaGGGGGAGCTTCCACAAGGA +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYLLHHG*GELPQG
Trigger: TCCTTGTGGAAGCTCCCCTCATCCGTGGTGCAGCAG...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGCTGGAGTCAGAAACTaGGGTGCTGTCTATAAAAAT +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLAGVRN*GAVYKN
Trigger: ATTTTTATAGACAGCACCTCAGTTTCTGACTCCAGC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCACTGTTTTAAACAAATaGACACACCGTGTTGCAATG +
Preference number: 2 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPTVLNK*THRVAM
Trigger: CATTGCAACACGGTGTGTTCATTTGTTTAAAACAGT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACATGCCTCCGAAGAGCTaGGCTCCATTCCACGGAGGG +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYMPPKS*APFHGG
Trigger: CCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCAT...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCATGAAGACCAGCAGATaGCGGACACTCATGAAAGAA +
Preference number: 2 (lower is better)
Translates to: SKNQESKLARQGTPPVTPMKTSR*RTLMKE
Trigger: TTCTTTCATGAGTGTCCGGCATCTGCTGGTCTTCAT...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGAACCAAAAGTTCGAATaGGGGAACAAAGAGGCTATG +
Preference number: 2 (lower is better)
Translates to: GALASYLVQATLLPGDLKNQKFE*GNKEAM
Trigger: CATAGCCTCTTTGTTCCCGCATTCGAACTTTTGGTT...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGACCTGGAAGATGCCGATaGGTTACAAGAGGTCCCGCG +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRPGRCR*VTRGPA
Trigger: CGCGGGACCTCTTGTAACCCATCGGCATCTTCCAGG...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAAGGACTTGTCAGAGCTaGTGCTGTGGCCTCTGCCGT +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRRTCQS*CCGLCR
Trigger: ACGGCAGAGGCCACAGCACCAGCTCTGACAAGTCCT...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp TCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATTCTTGCACCTCTTGGTaGCCTCCTGCCCACTGTGGG +
Preference number: 2 (lower is better)
Translates to: SSSEASCGFPQLIVPYFHSCTSW*PPAHCG
Trigger: CCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGA...ATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR TCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGATGGCAGAATTCTTCCTaGCCCCAACCGTTACCACCC +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRWQNSS*PQPLPP
Trigger: GGGTGGTAACGGTTGGGGTCAGGAAGAATTCTGCCA...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACATGACGGCTCGAGCTTaGCACAGGTTCTCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYMTARA*HRFSQL
Trigger: CAGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCAT...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCTGCTGTGGCTCAATGTaGTGTCACGGGCAGCACGTG +
Preference number: 2 (lower is better)
Translates to: TKINSNLDPSHRETHCQCCCGSM*CHGQHV
Trigger: CACGTGCTGCCCGTGACAGCACATTGAGCCACAGCA...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCACTTGTCAGAGCTGGTaGTGTGGCCTCTGCCGTCAC +
Preference number: 2 (lower is better)
Translates to: TKINSNLDPSHRETHCQCTCQSW*CGLCRH
Trigger: GTGACGGCAGAGGCCACAGCACCAGCTCTGACAAGT...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTTTACGGGAGGCGCCTaGAGGGACAGCCATTCTCCT +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYFTGGA*RDSHSP
Trigger: AGGAGAATGGCTGTCCCTGCAGGCGCCTCCCGTAAA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGCAGGAGAGACGAACATaGCCGGGTGGAAACGGGCCG +
Preference number: 2 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWQERRT*PGGNGP
Trigger: CGGCCCGTTTCCACCCGGGCATGTTCGTCTCTCCTG...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGAGATCAATTCTAATCTaGATCCAAGCCATAGGGAAA +
Preference number: 2 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSRSILI*IQAIGK
Trigger: TTTCCCTATGGCTTGGATCCAGATTAGAATTGATCT...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTATAAGCAGGCGATGTTaGACCAGTATAGCTGTCACC +
Preference number: 2 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAISRRC*TSIAVT
Trigger: GGTGACAGCTATACTGGTCCAACATCGCCTGCTTAT...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACGGACATCTCTTGCTCTaGGACAGGGTCCTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYGHLLL*DRVLLG
Trigger: GCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCC...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp TCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATTGGTCTTGCACCTCTTaGTGGCCTCCTGCCCACTGT +
Preference number: 2 (lower is better)
Translates to: SSSEASCGFPQLIVPYFHWSCTS*WPPAHC
Trigger: ACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCA...ATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR TCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTACTGTTTTAAACAAATaGACACACCGTGTTGCAATG +
Preference number: 2 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLTVLNK*THRVAM
Trigger: CATTGCAACACGGTGTGTTCATTTGTTTAAAACAGT...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTATGAAGACCAGCAGATaGCGGACACTCATGAAAGAA +
Preference number: 2 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAMKTSR*RTLMKE
Trigger: TTCTTTCATGAGTGTCCGGCATCTGCTGGTCTTCAT...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGGTGGCAAACGCGCAGTaGTCAGCCTGCTGCACCACG +
Preference number: 2 (lower is better)
Translates to: DFKKDPIVEFILTVYREKVANAQ*SACCTT
Trigger: CGTGGTGCAGCAGGCTGAGCACTGCGCGTTTGCCAC...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTGACACTGCGTTCTCATaGTGGGTTTTTCACCAGCTC +
Preference number: 2 (lower is better)
Translates to: FSDTRHERPELNHIAFIVDTAFS*WVFHQL
Trigger: GAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTC...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGGCCACCAGGGGCCTCTaGCGAAGTCAGGAGAGACGA +
Preference number: 2 (lower is better)
Translates to: DFKKDPIVEFILTVYREKATRGL*RSQERR
Trigger: TCGTCTCTCCTGACTTCGGCAGAGGCCCCTGGTGGC...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGGTCACGGGCAGCACGTaGCAAACGCGCAGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: DFKKDPIVEFILTVYREKVTGST*QTRSAQ
Trigger: CTGAGCACTGCGCGTTTGCCACGTGCTGCCCGTGAC...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTGGCAGCTTCCAGGGTaGCCTCTTGCCCCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: DFKKDPIVEFILTVYREKWQLPG*PLAPGH
Trigger: ATGCCCAGGGGCAAGAGGCCACCCTGGAAGCTGCCA...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTATTTCTCTCCAGCCGTaGGTTCCCTGGAGACACAAA +
Preference number: 2 (lower is better)
Translates to: FSDTRHERPELNHIAFIVISLQP*VPWRHK
Trigger: TTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAAT...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACAGATCAATTCTAATCTaGATCCAAGCCATAGGGAAA +
Preference number: 2 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDRSILI*IQAIGK
Trigger: TTTCCCTATGGCTTGGATCCAGATTAGAATTGATCT...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGAGGGCTGCAGGGGTGTaGCTGAAATCAAGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: DFKKDPIVEFILTVYREKRAAGV*LKSRQA
Trigger: GGCCTGCCTTGATTTCAGCCACACCCCTGCAGCCCT...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGACTTTCTAGAAGACACTaGAATGGCCTCACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRLSRRH*NGLTGG
Trigger: CCCTCCTGTGAGGCCATTCCAGTGTCTTCTAGAAAG...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACCTTTGGCCTCTTACCTaGTGCAGGCAACTCTCTTGC +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYLWPLT*CRQLSC
Trigger: GCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAG...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACCCGCCGTCCTCCCATTaGTCCAGTTTTGCAATCACT +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYPPSSH*SSFAIT
Trigger: AGTGATTGCAAAACTGGACCAATGGGAGGACGGCGG...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGCTGGAGCTTCAAAGCTaGTCTTGGCCCAGCACAGAC +
Preference number: 2 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWLELQS*SWPSTD
Trigger: GTCTGTGCTGGGCCAAGAGCAGCTTTGAAGCTCCAG...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTTTCCACAAAAGCCCTaGACCCACAAAGGCACCATC +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYFPQKP*THKGTI
Trigger: GATGGTGCCTTTGTGGGTGCAGGGCTTTTGTGGAAA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGCCCCTGGGCATTTGGTaGGGCACAGAACTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: DFKKDPIVEFILTVYREKPLGIW*GTELRS
Trigger: TGACCTCAGTTCTGTGCCCCACCAAATGCCCAGGGG...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACAACCCTCCCATACGGTaGAACAACAGCCTAAGATCT +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYNPPIR*NNSLRS
Trigger: AGATCTTAGGCTGTTGTTTCACCGTATGGGAGGGTT...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGTGGGGACTCAGCCTCTaGAACGAGCTCAAAGAACCA +
Preference number: 2 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWWGLSL*NELKEP
Trigger: TGGTTCTTTGAGCTCGTTTCAGAGGCTGAGTCCCCA...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACGGTTACCTTCCTGGATaGGAAACTGAAACTGAAGGC +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYGYLPG*ETETEG
Trigger: GCCTTCAGTTTCAGTTTCTCATCCAGGAAGGTAACC...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp GGAGGCTTTCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATCATTCCATTTACAGATaGAAAAGCACAGGCAAACAA +
Preference number: 2 (lower is better)
Translates to: GGFPPQRPLVAFHNLLSHHSIYR*KSTGKQ
Trigger: TTGTTTGCCTGTGCTTTTTCATCTGTAAATGGAATG...ATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGAAAGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACCAGCACAGACCTTACTaGGTTAGCATCTTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYQHRPY*VSIFLK
Trigger: CTTGAGGAAGATGCTAACGCAGTAAGGTCTGTGCTG...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAAACCAAAAGTTCGAATaGGGGAACAAAGAGGCTATG +
Preference number: 2 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRNQKFE*GNKEAM
Trigger: CATAGCCTCTTTGTTCCCGCATTCGAACTTTTGGTT...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTGTCCTGTCTACAAATaGTGTGGCTCAATGTGCTGT +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYCPVYK*CGSMCC
Trigger: ACAGCACATTGAGCCACAGCATTTGTAGACAGGACA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGGAAAAGCTTTCCTGGTaGCTGGCAATGTGGCACACG +
Preference number: 2 (lower is better)
Translates to: DFKKDPIVEFILTVYREKEKLSW*LAMWHT
Trigger: CGTGTGCCACATTGCCAGCCACCAGGAAAGCTTTTC...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGAACCCTCCCATACGGTaGAACAACAGCCTAAGATCT +
Preference number: 2 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWNPPIR*NNSLRS
Trigger: AGATCTTAGGCTGTTGTTTCACCGTATGGGAGGGTT...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR TCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGGGTTACCTTCCTGGATaGGAAACTGAAACTGAAGGC +
Preference number: 2 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWGYLPG*ETETEG
Trigger: GCCTTCAGTTTCAGTTTCTCATCCAGGAAGGTAACC...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGCATAGGGAAACCCACTaGCAATGCCCAAGGTTACCT +
Preference number: 2 (lower is better)
Translates to: DFKKDPIVEFILTVYREKHRETH*QCPRLP
Trigger: AGGTAACCTTGGGCATTGGCAGTGGGTTTCCCTATG...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACAAATGGGTTTCCTGTTaGACAAAGACCAGAAATGGC +
Preference number: 2 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYKWVSC*TKTRNG
Trigger: GCCATTTCTGGTCTTTGTCCAACAGGAAACCCATTT...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp GGCCTGGCCCCTCGCTGGTGTCCGTCGGCAGGCTCCTaGCCCGGCCTGGCCCCTCGCTGGTGTCCGTCGGCA +
Preference number: 3 (lower is better)
Translates to: GLAPRWCPSAGS*PGLAPRWCPSA
Trigger: TGCCGACGGACACCAGCGAGGGGCCAGGCCGGGCCAGGAGCCTGCCGACGGACACCAGCGAGGGGCCAGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CCA 72 bp GCTGGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTaGGCTGCAACGGGCCTGCCACCCGTGTCCTCGGAG +
Preference number: 3 (lower is better)
Translates to: AGVAAPCRDQWL*AATGLPPVSSE
Trigger: CTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp TGGCACTCCTGTCAGATCCCAGCCGGCCAGGGAGTCTaGCCCGGCCTGGCCCCTCGCTGGTGTCCGTCGGCA +
Preference number: 3 (lower is better)
Translates to: WHSCQIPAGQGV*PGLAPRWCPSA
Trigger: TGCCGACGGACACCAGCGAGGGGCCAGGCCGGGCCAGACTCCCTGGCCGGCTGGGATCTGACAGGAGTGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR GCA 72 bp GGGACCTGGCCCTGGCTCTGGTCTGGCGGCAACCCCTaGTGGCAGAGGCAGGAGGTGTGCGGCTGGAGTCAG +
Preference number: 3 (lower is better)
Translates to: GTWPWLWSGGNP*WQRQEVCGWSQ
Trigger: CTGACTCCAGCCGCACACCTCCTGCCTCTGCCAGCAGGGGTTGCCGCCAGACCAGAGCCAGGGCCAGGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp CTTCCTGCTGGTGTGGCGGCGCCCTGTAGGGACCAGTaGCTCTGGGCTGCAACGGGCCTGCCACCCGTGTCC +
Preference number: 3 (lower is better)
Translates to: LPAGVAAPCRDQ*LWAATGLPPVS
Trigger: GGACACGGGTGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACCAGCAGGAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp GGCTCAGGTATCCTCCCCTGTGCTGGGAGTCCGGAGTaGGGACGGTGTCCACCCAGACCCGCCAGGCCACGC +
Preference number: 3 (lower is better)
Translates to: GSGILPCAGSPE*GRCPPRPARPR
Trigger: GCGTGGCCTGGCGGGTCTGGGTGGACACCGTCCCCACTCCGGACTCCCAGCACAGGGGAGGATACCTGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp CCTGCCCAAGGGCCTGGGAGCTGCCCGCCCCCACCGTaGCCCACACCCACCTTGGAAGATTGGCAGCTTCCA +
Preference number: 3 (lower is better)
Translates to: PAQGPGSCPPPP*PTPTLEDWQLP
Trigger: TGGAAGCTGCCAATCTTCCAAGGTGGGTGTGGGGCACGGTGGGGGCGGGCAGCTCCCAGGCCCTTGGGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp CGGCCACTCCAGGCAAACGAAGCCACCCCCGAACCTTaGAGAGGCCGCACTCCCTCAGCAGGGGGACCACGG +
Preference number: 3 (lower is better)
Translates to: RPLQANEATPEP*RGRTPSAGGPR
Trigger: CCGTGGTCCCCCTGCTGAGGGAGTGCGGCCTCTGCAAGGTTCGGGGGTGGCTTCGTTTGCCTGGAGTGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp GCCCCTCGCTGGTGTCCGTCGGCAGGCTCCTGGCCCTaGCCTTCTCCAGCCCCGCAGCTCCTTGTGTTCACA +
Preference number: 3 (lower is better)
Translates to: APRWCPSAGSWP*PSPAPQLLVFT
Trigger: TGTGAACACAAGGAGCTGCGGGGCTGGAGAAGGCCAGGGCCAGGAGCCTGCCGACGGACACCAGCGAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CAA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTGGAGGCCCAGGAGCCTaGTGGGGAAGGGAGCCGGGT +
Preference number: 3 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSGGPGA*WGREPG
Trigger: ACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCCTCC...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp CGCCCTACAGAGGGCCAGGTGGTTCTGGCAGATCCCTaGACTCACATACTGGGGAGGCCGCCTCCCCGCCAG +
Preference number: 3 (lower is better)
Translates to: RPTEGQVVLADP*THILGRPPPRQ
Trigger: CTGGCGGGGAGGCGGCCTCCCCAGTATGTGAGTGCAGGGATCTGCCAGAACCACCTGGCCCTCTGTAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp AGCCCCCTCGGCCCTGGTGATCAGCATCCATCTGAGTaGTCGGTGGACGGACACGGGAGCCGCCTCTCCAGC +
Preference number: 3 (lower is better)
Translates to: SPLGPGDQHPSE*SVDGHGSRLSS
Trigger: GCTGGAGAGGCGGCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAGGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp GCCAGGTGGTTCTGGCAGATCCCTGCACTCACATACTaGGGAGGCCGCCTCCCCGCCAGGCTCCGGACACAG +
Preference number: 3 (lower is better)
Translates to: ARWFWQIPALTY*GGRLPARLRTQ
Trigger: CTGTGTCCGGAGCCTGGCGGGGAGGCGGCCTCCCCAGTATGTGAGTGCAGGGATCTGCCAGAACCACCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp AACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGTaGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCG +
Preference number: 3 (lower is better)
Translates to: NGPWTGQAPAAP*FDSRQSGEGMP
Trigger: CGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp GGCAAACAAGCGGTTCCTCGGGCGGCCCAAGGAGCCTaGCACTCCTGTCAGATCCCAGCCGGCCAGGGAGTC +
Preference number: 3 (lower is better)
Translates to: GKQAVPRAAQGA*HSCQIPAGQGV
Trigger: GACTCCCTGGCCGGCTGGGATCTGACAGGAGTGCCAGGCTCCTTGGGCCGCCCGAGGAACCGCTTGTTTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR CAA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGACCCACCTTGGAAGATaGGCAGCTTCCAGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPTHLGR*AASRVA
Trigger: GGCCACCCTGGAAGCTGCCAATCTTCCAAGGTGGGT...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCTGGAGAGTCCGCTTCTaGGGGGCCCCATGGGCCCCC +
Preference number: 3 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVWRVRF*GAPWAP
Trigger: GGGGGCCCATGGGGCCCCCAAGAAGCGGACTCTCCA...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp TGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTGAGGCCTCTGGGCTCTGCAGGCACTaGGGGGATCGGCTTTCCCAC +
Preference number: 3 (lower is better)
Translates to: WARGSKVQVSPGLVPEASGLCRH*GDRLSH
Trigger: GTGGGAAAGCCGATCCCCCAAGTGCCTGCAGAGCCC...AGAGGCCTCAGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR TCA 72 bp CACCTGGCACCCTCCAAGGGCCCACGCGGAGCCAGCTaGGGACTCACGTCCATGCTCCAGAACGTCAGCACC +
Preference number: 3 (lower is better)
Translates to: HLAPSKGPRGAS*GLTSMLQNVST
Trigger: GGTGCTGACGTTCTGGAGCATGGACGTGAGTCCTCAGCTGGCTCCGCGTGGGCCCTTGGAGGGTGCCAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 72 bp ACGGAGGCGACAGGTGCTTTGATGCCTCCGAAGAGCTaGGCTCCATTCCACGGAGGGAGCGGGCTGCGCCGC +
Preference number: 3 (lower is better)
Translates to: TEATGALMPPKS*APFHGGSGLRR
Trigger: GCGGCGCAGCCCGCTCCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCATCAAAGCACCTGTCGCCTCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp CCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTaGCACCCGTGTCCTCGGAGCCAGGAAACATGGCTG +
Preference number: 3 (lower is better)
Translates to: PVGTSGSGLQRA*HPCPRSQETWL
Trigger: CAGCCATGTTTCCTGGCTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTaGAGGGGCAGAAGGAGTCCCACACCTGACACTGCG +
Preference number: 3 (lower is better)
Translates to: ACSPGHTARNTH*RGRRSPTPDTA
Trigger: CGCAGTGTCAGGTGTGGGACTCCTTCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp ACCAGGGGCCTCTGCCGAAGTCAGGAGAGACGAACATaGCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCT +
Preference number: 3 (lower is better)
Translates to: TRGLCRSQERRT*PGGNGPWTGQA
Trigger: AGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTCTCTCCTGACTTCGGCAGAGGCCCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp CCTCTGCCGAAGTCAGGAGAGACGAACATGCCCGGGTaGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: PLPKSGETNMPG*KRAVDRAGSSC
Trigger: GCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTCTCTCCTGACTTCGGCAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp CCACCCAGACCCGCCAGGCCACGCTCCAGGCTTCCCTaGCTTAGGGCTGACAAGACTTCCGGGCAGTGGACT +
Preference number: 3 (lower is better)
Translates to: PPRPARPRSRLP*LRADKTSGQWT
Trigger: AGTCCACTGCCCGGAAGTCTTGTCAGCCCTAAGCCAGGGAAGCCTGGAGCGTGGCCTGGCGGGTCTGGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp ACCTGGCCCTGGCTCTGGTCTGGCGGCAACCCCTGCTaGCAGAGGCAGGAGGTGTGCGGCTGGAGTCAGAAA +
Preference number: 3 (lower is better)
Translates to: TWPWLWSGGNPC*QRQEVCGWSQK
Trigger: TTTCTGACTCCAGCCGCACACCTCCTGCCTCTGCCAGCAGGGGTTGCCGCCAGACCAGAGCCAGGGCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCGGTCTGCAGACCGACTaGAATTTGCTGGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: DEHARVETGRGQGRLQLLGLQTD*NLLGPG
Trigger: CCCAGGCCCCAGCAAATTCAAGTCGGTCTGCAGACC...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGATGCCCTCCCAGGGCCTaGCACCGTGCACCTACTGTG +
Preference number: 3 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRCPPRA*HRAPTV
Trigger: CACAGTAGGTGCACGGTGCAAGGCCCTGGGAGGGCA...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp CTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTaGACACCCCAGAGCTGGGATGCAGGGCTGCAGGGG +
Preference number: 3 (lower is better)
Translates to: LSSRGFPGDTNL*TPQSWDAGLQG
Trigger: CCCCTGCAGCCCTGCATCCCAGCTCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GCTACAGGGCCATACAGGCTCAGGTATCCTCCCCTGTaGTGGGAGTCCGGAGTGGGGACGGTGTCCACCCAG +
Preference number: 3 (lower is better)
Translates to: ATGPYRLRYPPL*WESGVGTVSTQ
Trigger: CTGGGTGGACACCGTCCCCACTCCGGACTCCCAGCACAGGGGAGGATACCTGAGCCTGTATGGCCCTGTAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp ACCTCCTTCCACCTGCAGATGGCCAGCACCTGCACCTaGCAGGCAGGAACACACGACAGGCCCAGCTCTGCC +
Preference number: 3 (lower is better)
Translates to: TSFHLQMASTCT*QAGTHDRPSSA
Trigger: GGCAGAGCTGGGCCTGTCGTGTGTTCCTGCCTGGCAGGTGCAGGTGCTGGCCATCTGCAGGTGGAAGGAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp CACCAGGGCTGGTTCCTGAGGCCTCTGCCCTGGGCTTaGAGACGGCATTGCCTCCCTGTTTCCTCATGGGGC +
Preference number: 3 (lower is better)
Translates to: HQGWFLRPLPWA*RRHCLPVSSWG
Trigger: GCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CCA 72 bp CGGGCCTGCCACCCGTGTCCTCGGAGCCAGGAAACATaGCTGCGAAACCCGTGTCTGACTCACTGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: RACHPCPRSQET*LRNPCLTHWLR
Trigger: CCTCAGCCAGTGAGTCAGACACGGGTTTCGCAGCCATGTTTCCTGGCTCCGAGGACACGGGTGGCAGGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp CAGGAGAGACGAACATGCCCGGGTGGAAACGGGCCGTaGACAGGGCAGGCTCCAGCTGCTCCGTGGTTTGAC +
Preference number: 3 (lower is better)
Translates to: QERRTCPGGNGP*TGQAPAAPWFD
Trigger: GTCAAACCACGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTCTCTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp TCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTaGACGGACACGGGAGCCGCCTCTCCAGCGAGTCTC +
Preference number: 3 (lower is better)
Translates to: SALVISIHLSAR*TDTGAASPASL
Trigger: GAGACTCGCTGGAGAGGCGGCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp GCCCAGCTCACGGTGTGGAAAAATGAACGCACCTTGTaGTACGGCCTCAAGGAACGGGGGCCTGGCCGGGGG +
Preference number: 3 (lower is better)
Translates to: AQLTVWKNERTL*YGLKERGPGRG
Trigger: CCCCCGGCCAGGCCCCCGTTCCTTGAGGCCGTACCACAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CCA 72 bp CCAAGCCCAGCAGCAGGGCACCTGTCCCATCCCCTCTaGCTCTACACTCCGAAAGCCAGGACAGCGCAACCC +
Preference number: 3 (lower is better)
Translates to: PSPAAGHLSHPL*LYTPKARTAQP
Trigger: GGGTTGCGCTGTCCTGGCTTTCGGAGTGTAGAGCCAGAGGGGATGGGACAGGTGCCCTGCTGCTGGGCTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CCA 72 bp GACTGCAGCCAGGCGGCTCCAATTCTCCTACTGTCCTaGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGG +
Preference number: 3 (lower is better)
Translates to: DCSQAAPILLLS*ARGSKVQVSPG
Trigger: CCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCCTGGCTGCAGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR CAA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGGAGGCCCAGGAGCCTaGTGGGGAAGGGAGCCGGGT +
Preference number: 3 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSGGPGA*WGREPG
Trigger: ACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCCTCC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCAGCTGCTCCGTGGTTaGACAGCAGGCAGTCTGGGG +
Preference number: 3 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAQLLRG*TAGSLG
Trigger: CCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp GCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGTGGGATGGGGCCGGGAGTCTGGCTTaGTGGCCCATCCCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: AWSCTSWWPPAHCGMWDGAGSLA*WPIPGR
Trigger: TCTGCCTGGGATGGGCCACAAAGCCAGACTCCCGGC...CCCATCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR TCA 72 bp CCCTCAGCAGGGGGACCACGGAGGCGACAGGTGCTTTaGTGCCTCCGAAGAGCTGAGCTCCATTCCACGGAG +
Preference number: 3 (lower is better)
Translates to: PSAGGPRRRQVL*CLRRAELHSTE
Trigger: CTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCATCAAAGCACCTGTCGCCTCCGTGGTCCCCCTGCTGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GGGCAGCACGTGGCAAACGCGCAGTGCTCAGCCTGCTaGACCACGGATGAGGGGAGCTTCCACAAGGAACCT +
Preference number: 3 (lower is better)
Translates to: GQHVANAQCSAC*TTDEGSFHKEP
Trigger: AGGTTCCTTGTGGAAGCTCCCCTCATCCGTGGTGCAGCAGGCTGAGCACTGCGCGTTTGCCACGTGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp ATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCAGTaGTCAGCCTGCTGCACCACGGATGAGGGGAGCTTC +
Preference number: 3 (lower is better)
Translates to: MCCHGQHVANAQ*SACCTTDEGSF
Trigger: GAAGCTCCCCTCATCCGTGGTGCAGCAGGCTGAGCACTGCGCGTTTGCCACGTGCTGCCCGTGACAGCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GGGAGTCTGGCTTTGTGGCCCATCCCAGGCAGAAGCTaGCCACGTGACCACCCCAGTAACAACCCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: GSLALWPIPGRS*PRDHPSNNPGQ
Trigger: CTGCCCAGGGTTGTTACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGATGGGCCACAAAGCCAGACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CCA 72 bp GGACAAAGGCGCTTCCATCCACCTTCACGGAGATGCTaGCTTCGCAGGCCGGTGGGCGAGGCGAGGTCCATA +
Preference number: 3 (lower is better)
Translates to: GQRRFHPPSRRC*LRRPVGEARSI
Trigger: TATGGACCTCGCCTCGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp AGCTTGTGTGGAACACCCGTGTCCCTGCCGGGAGTCTaGCTTTGTGGCCCATCCCAGGCAGAAGCTGCCCAC +
Preference number: 3 (lower is better)
Translates to: SLCGTPVSLPGV*LCGPSQAEAAH
Trigger: GTGGGCAGCTTCTGCCTGGGATGGGCCACAAAGCCAGACTCCCGGCAGGGACACGGGTGTTCCACACAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CAA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGGTTACCCCAGGGGCTTaGGCCTCTTACCTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAVTPGA*ASYLVQ
Trigger: CTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAAC...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGATGCCCCACACCCACCTaGGAAGATTGGCAGCTTCCA +
Preference number: 3 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRCPTPT*EDWQLP
Trigger: TGGAAGCTGCCAATCTTCCAAGGTGGGTGTGGGGCA...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAACCAAGAATCAAAGCTaGCTCGCCAGGGCACACCGC +
Preference number: 3 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRTKNQS*LARAHR
Trigger: GCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CATAACAGCCATGAGGAAGGGGAGACGTCCAGCACTTGGCCGGGTCTCAGACACGGGCTCTGCAGGCACTaGGGGGATCGGCTTTCCCAC +
Preference number: 3 (lower is better)
Translates to: HNSHEEGETSSTWPGLRHGLCRH*GDRLSH
Trigger: GTGGGAAAGCCGATCCCCCAAGTGCCTGCAGAGCCC...GTGTCTGAGACCCGGCCAAGTGCTGGACGTCTCCCCTTCCTCATGGCTGTTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR GCA 72 bp GGCAGGGGGCAGGCACCCCTCTGTCCTGTCTACAAATaGTGTGGCTCAATGTGCTGTCACGGGCAGCACGTG +
Preference number: 3 (lower is better)
Translates to: GRGQAPLCPVYK*CGSMCCHGQHV
Trigger: CACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGACAGGACAGAGGGGTGCCTGCCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp CGAAGAGCTGAGCTCCATTCCACGGAGGGAGCGGGCTaGGCCGCCGTCCTCCCATTGGTCCAGTTTTGCAAT +
Preference number: 3 (lower is better)
Translates to: RRAELHSTEGAG*AAVLPLVQFCN
Trigger: ATTGCAAAACTGGACCAATGGGAGGACGGCGGCGCAGCCCGCTCCCTCCGTGGAATGGAGCTCAGCTCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GCACTCCCTCAGCAGGGGGACCACGGAGGCGACAGGTaGTTTGATGCCTCCGAAGAGCTGAGCTCCATTCCA +
Preference number: 3 (lower is better)
Translates to: ALPQQGDHGGDR*FDASEELSSIP
Trigger: TGGAATGGAGCTCAGCTCTTCGGAGGCATCAAAGCACCTGTCGCCTCCGTGGTCCCCCTGCTGAGGGAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp ACCAACAACGCAGCTTGTGTGGAACACCCGTGTCCCTaGCGGGAGTCTGGCTTTGTGGCCCATCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: TNNAACVEHPCP*RESGFVAHPRQ
Trigger: CTGCCTGGGATGGGCCACAAAGCCAGACTCCCGGCAGGGACACGGGTGTTCCACACAAGCTGCGTTGTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CCA 72 bp AGGTGTCACCAGGGCTGGTTCCTGAGGCCTCTGCCCTaGGCTTGCAGACGGCATTGCCTCCCTGTTTCCTCA +
Preference number: 3 (lower is better)
Translates to: RCHQGWFLRPLP*ACRRHCLPVSS
Trigger: TGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTGGTGACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR CAA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGCTTCAAAGCTGCTCTaGGCCCAGCACAGACCTTAC +
Preference number: 3 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRASKLL*AQHRPY
Trigger: GTAAGGTCTGTGCTGGGCCAAGAGCAGCTTTGAAGC...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGGCTTCAAAGCTGCTCTaGGCCCAGCACAGACCTTAC +
Preference number: 3 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAASKLL*AQHRPY
Trigger: GTAAGGTCTGTGCTGGGCCAAGAGCAGCTTTGAAGC...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTTTCCAGGGTGGCCTCTaGCCCCTGGGCATTTGGTGG +
Preference number: 3 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSFQGGL*PLGIWW
Trigger: CCACCAAATGCCCAGGGGCAAGAGGCCACCCTGGAA...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGGGTGGGGGTACCCCTaGGAGAGTCCGCTTCTTGGG +
Preference number: 3 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLGWGYP*ESPLLG
Trigger: CCCAAGAAGCGGACTCTCCAAGGGGTACCCCCACCC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp CTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATaGCGGACTCTGCCCGTAGAGGCTGACAATTTCCAC +
Preference number: 3 (lower is better)
Translates to: LRGLTAGSLGRG*RTLPVEADNFH
Trigger: GTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GGGGACACCTCTGATCTCCATAAACATGGACACTGCTaGCCCGACACAGGTGGCCCCATCGGAGGGCAGGAA +
Preference number: 3 (lower is better)
Translates to: GDTSDLHKHGHC*PDTGGPIGGQE
Trigger: TTCCTGCCCTCCGATGGGGCCACCTGTGTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp ACAGGGGCCCGTCTTCCCGGAGGCCCAGGAGCCTTGTaGGGAAGGGAGCCGGGTTTTCAGATCACAAATTTC +
Preference number: 3 (lower is better)
Translates to: TGARLPGGPGAL*GREPGFQITNF
Trigger: GAAATTTGTGATCTGAAAACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCCTCCGGGAAGACGGGCCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp CTGAAGGGCGTCAGGGAACCAACAACGCAGCTTGTGTaGAACACCCGTGTCCCTGCCGGGAGTCTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: LKGVREPTTQLV*NTRVPAGSLAL
Trigger: CAAAGCCAGACTCCCGGCAGGGACACGGGTGTTCCACACAAGCTGCGTTGTTGGTTCCCTGACGCCCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CAA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAGCTTCAAAGCTGCTCTaGGCCCAGCACAGACCTTAC +
Preference number: 3 (lower is better)
Translates to: IKACSPGHTARNTHCRGRASKLL*AQHRPY
Trigger: GTAAGGTCTGTGCTGGGCCAAGAGCAGCTTTGAAGC...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCGGGTGGGGGTACCCCTaGGAGAGTCCGCTTCTTGGG +
Preference number: 3 (lower is better)
Translates to: LKEPRIKACSPGHTARNTGWGYP*ESPLLG
Trigger: CCCAAGAAGCGGACTCTCCAAGGGGTACCCCCACCC...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCAAGAGAAGTTTCAGATaGCGCCAGAGAGCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: DEHARVETGRGQGRLQLLKRSFR*RQRAQD
Trigger: ATCCTGAGCTCTCTGGCGCAATCTGAAACTTCTCTT...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACAGCTGCTCCGTGGTTaGACAGCAGGCAGTCTGGGG +
Preference number: 3 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEQLLRG*TAGSLG
Trigger: CCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGTGCAGGCAACTCTCTaGCCTGGTGATCTCAAGATG +
Preference number: 3 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRVQATL*PGDLKM
Trigger: CATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCAC...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 72 bp TCAGACACCTCATGGGGACCTATGACGGCTCGAGCTTaGCACAGGTTCTCCCAGCTGCTCGACACGCTGTGG +
Preference number: 3 (lower is better)
Translates to: SDTSWGPMTARA*HRFSQLLDTLW
Trigger: CCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCATAGGTCCCCATGAGGTGTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 72 bp GAGGCTCTGCCAAGCCCAGCTCACGGTGTGGAAAAATaGACGCACCTTGTGGTACGGCCTCAAGGAACGGGG +
Preference number: 3 (lower is better)
Translates to: EALPSPAHGVEK*THLVVRPQGTG
Trigger: CCCCGTTCCTTGAGGCCGTACCACAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGCTTGGCAGAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR GCA 72 bp CCCAGGCAAGGGTCAGAGATGGAAGGGGACATCTCTTaGTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTG +
Preference number: 3 (lower is better)
Translates to: PRQGSEMEGDIS*SGTGSCLAQTV
Trigger: CACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTTCCATCTCTGACCCTTGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp GGGAGCTTCCACAAGGAACCTGACGGGGTGGTTCTCTaGAGCTTCAAAGCTGCTCTTGGCCCAGCACAGACC +
Preference number: 3 (lower is better)
Translates to: GSFHKEPDGVVL*SFKAALGPAQT
Trigger: GGTCTGTGCTGGGCCAAGAGCAGCTTTGAAGCTCCAGAGAACCACCCCGTCAGGTTCCTTGTGGAAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp GGGGCAGGCACCCCTCTGTCCTGTCTACAAATGCTGTaGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAA +
Preference number: 3 (lower is better)
Translates to: GAGTPLSCLQML*LNVLSRAARGK
Trigger: TTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGACAGGACAGAGGGGTGCCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp TTCCAGTTAAACGCCCTACAGAGGGCCAGGTGGTTCTaGCAGATCCCTGCACTCACATACTGGGGAGGCCGC +
Preference number: 3 (lower is better)
Translates to: FQLNALQRARWF*QIPALTYWGGR
Trigger: GCGGCCTCCCCAGTATGTGAGTGCAGGGATCTGCCAGAACCACCTGGCCCTCTGTAGGGCGTTTAACTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp CCACGCACTGTGGAGCGTGGCACAGGCCACACAAACTaGCTCCTACCACCTAACAGAGACGAGTCGCACACT +
Preference number: 3 (lower is better)
Translates to: PRTVERGTGHTN*LLPPNRDESHT
Trigger: AGTGTGCGACTCGTCTCTGTTAGGTGGTAGGAGCCAGTTTGTGTGGCCTGTGCCACGCTCCACAGTGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp CTCTCAAAGGGGCCACTGGGAATACTGGCCACAAGGTaGAGGCTCTGCCAAGCCCAGCTCACGGTGTGGAAA +
Preference number: 3 (lower is better)
Translates to: LSKGPLGILATR*RLCQAQLTVWK
Trigger: TTTCCACACCGTGAGCTGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR-3UTR CAA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGGGTCTGCAGACCGACTaGAATTTGCTGGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: GALASYLVQATLLPGDLKGLQTD*NLLGPG
Trigger: CCCAGGCCCCAGCAAATTCAAGTCGGTCTGCAGACC...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGATTCCAGGGTGGCCTCTaGCCCCTGGGCATTTGGTGG +
Preference number: 3 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRFQGGL*PLGIWW
Trigger: CCACCAAATGCCCAGGGGCAAGAGGCCACCCTGGAA...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGACCAAGAATCAAAGCTaGCTCGCCAGGGCACACCGC +
Preference number: 3 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSTKNQS*LARAHR
Trigger: GCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGT...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGTTACCCCAGGGGCTTaGGCCTCTTACCTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLVTPGA*ASYLVQ
Trigger: CTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAAC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CTTCTTACAAGGACACCAAGCAGCTTGGATCAGGGCCCACCCAGAGCCCTGATGATGGTCTTGCACCTCTaGGTGGCCTCCTGCCCACTG +
Preference number: 3 (lower is better)
Translates to: LLTRTPSSLDQGPPRALMMVLHL*VASCPL
Trigger: CAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCAT...CATCAGGGCTCTGGGTGGGCCCTGATCCAAGCTGCTTGGTGTCCTTGTAAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR CAA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAACGCCCCAGTCTCCACTaGGCAGTGAGGGTATTTCCA +
Preference number: 3 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKRPSLH*AVRVFP
Trigger: TGGAAATACCCTCACTGCCAAGTGGAGACTGGGGCG...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAAATAAGCAGGCGATGTaGGACCAGTATAGCTGTCAC +
Preference number: 3 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRNKQAM*DQYSCH
Trigger: GTGACAGCTATACTGGTCCAACATCGCCTGCTTATT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGGGCAGGAGAACCACTaGAACCCAGGAAGCGGAGTT +
Preference number: 3 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLGQENH*NPGSGV
Trigger: AACTCCGCTTCCTGGGTTCAAGTGGTTCTCCTGCCC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGGGCAGGAGAACCACTaGAACCCAGGAAGCGGAGTT +
Preference number: 3 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEGQENH*NPGSGV
Trigger: AACTCCGCTTCCTGGGTTCAAGTGGTTCTCCTGCCC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 72 bp ACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATaGCGGCTCGAGCTTGACACAGGTTCTCCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: TKKGLQTPHGDL*RLELDTGSPSC
Trigger: GCAGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GATGAGAAACTGAAACTGAAGGCCACCAGGGGCCTCTaGCGAAGTCAGGAGAGACGAACATGCCCGGGTGGA +
Preference number: 3 (lower is better)
Translates to: DEKLKLKATRGL*RSQERRTCPGG
Trigger: TCCACCCGGGCATGTTCGTCTCTCCTGACTTCGGCAGAGGCCCCTGGTGGCCTTCAGTTTCAGTTTCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp AGGACTCACGTCCATGCTCCAGAACGTCAGCACCTCTaGCTCCCATCACCAAGAAGGGGCTTCAGACACCTC +
Preference number: 3 (lower is better)
Translates to: RTHVHAPERQHL*LPSPRRGFRHL
Trigger: GAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAGGCAGAGGTGCTGACGTTCTGGAGCATGGACGTGAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GAGAACGGACTAATACAGGGTGCCATCGGGAAGGACTaGAGCCAGGCGGCTCCAATTCTCCTACTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: ENGLIQGAIGKD*SQAAPILLLSW
Trigger: CCAGGACAGTAGGAGAATTGGAGCCGCCTGGCTGCAGTCCTTCCCGATGGCACCCTGTATTAGTCCGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CCA 72 bp GCGTTAGCATCTTCCTCAAGTCACTCGGCGGATTCCTaGAAGATGCCGATGGGTTACAAGAGGTCCCGCGGG +
Preference number: 3 (lower is better)
Translates to: ALASSSSHSADS*KMPMGYKRSRG
Trigger: CCCGCGGGACCTCTTGTAACCCATCGGCATCTTCCAGGAATCCGCCGAGTGACTTGAGGAAGATGCTAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp CCCCCATCAAAGCTTGTCCCAGGCAAGGGTCAGAGATaGAAGGGGACATCTCTTGCTCTGGGACAGGGTCCT +
Preference number: 3 (lower is better)
Translates to: PPSKLVPGKGQR*KGTSLALGQGP
Trigger: AGGACCCTGTCCCAGAGCAAGAGATGTCCCCTTCCATCTCTGACCCTTGCCTGGGACAAGCTTTGATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp CTTAGGACAGGTTTCCCAGGCAGTACCCAGGTCGTGTaGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTC +
Preference number: 3 (lower is better)
Translates to: LRTGFPGSTQVV*GIPKQKLRTAF
Trigger: GAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGCCTGGGAAACCTGTCCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp GGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTaGAAGGGTCTTCCAGGCCTGCTGAGGCCTCTTTTT +
Preference number: 3 (lower is better)
Translates to: GSPSCSTRCGMY*KGLPGLLRPLF
Trigger: AAAAAGAGGCCTCAGCAGGCCTGGAAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp TCCAGGAAATCCTCTCAAAGGGGCCACTGGGAATACTaGCCACAAGGTGGAGGCTCTGCCAAGCCCAGCTCA +
Preference number: 3 (lower is better)
Translates to: SRKSSQRGHWEY*PQGGGSAKPSS
Trigger: TGAGCTGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGAGGATTTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CCA 72 bp ACAGGGAGCTCCAGGAAATCCTCTCAAAGGGGCCACTaGGAATACTGGCCACAAGGTGGAGGCTCTGCCAAG +
Preference number: 3 (lower is better)
Translates to: TGSSRKSSQRGH*EYWPQGGGSAK
Trigger: CTTGGCAGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGAGGATTTCCTGGAGCTCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CCA 72 bp TTCCTATCGAAACAGAGGGCATGGTCTTGCACCTCTTaGTGGCCTCCTGCCCACTGTGGGATGTGGGATGGG +
Preference number: 3 (lower is better)
Translates to: FLSKQRAWSCTS*WPPAHCGMWDG
Trigger: CCCATCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGATAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR CAA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCCGCCCCAGTCTCCACTaGGCAGTGAGGGTATTTCCA +
Preference number: 3 (lower is better)
Translates to: SKNQESKLARQGTPPVTPRPSLH*AVRVFP
Trigger: TGGAAATACCCTCACTGCCAAGTGGAGACTGGGGCG...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp GCAGATATTCAGGGCGAAACAGTGAAAGGGAGGCAGTGCGTCACAGGCGTAATCACAGAGGGCATGGTCTaGCACCTCTTGGTGGCCTCC +
Preference number: 3 (lower is better)
Translates to: ADIQGETVKGRQCVTGVITEGMV*HLLVAS
Trigger: GGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGT...GATTACGCCTGTGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAATATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR TCA 72 bp AAACTCTGGGCAAAGTGGGGCCAGGGAGGTCACTGCTaGGCAGAGGATGATAGGACTTGTCAGAGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: KLWAKWGQGGHC*AEDDRTCQSWC
Trigger: GCACCAGCTCTGACAAGTCCTATCATCCTCTGCTCAGCAGTGACCTCCCTGGCCCCACTTTGCCCAGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 72 bp GGCTTCAGAGCCGCTGACCCAGCTTGCAGCTCAAAATaGGGACAAAGGCGCTTCCATCCACCTTCACGGAGA +
Preference number: 3 (lower is better)
Translates to: GFRAADPACSSK*GQRRFHPPSRR
Trigger: TCTCCGTGAAGGTGGATGGAAGCGCCTTTGTCCTCATTTTGAGCTGCAAGCTGGGTCAGCGGCTCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GGACTGTTACCCCAGGGGCTTTGGCCTCTTACCTGGTaGAGGCAACTCTCTTGCCTGGTGATCTCAAGATGG +
Preference number: 3 (lower is better)
Translates to: GLLPQGLWPLTW*RQLSCLVISRW
Trigger: CCATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAACAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp ACGCACTCCTGGCAAGCGAGTCTTTCTAGAAGACACTaGAATGGCCTCACAGGAGGGTATGGGCTCCAGGAG +
Preference number: 3 (lower is better)
Translates to: THSWQASLSRRH*NGLTGGYGLQE
Trigger: CTCCTGGAGCCCATACCCTCCTGTGAGGCCATTCCAGTGTCTTCTAGAAAGACTCGCTTGCCAGGAGTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp AAAAATCCAAGATTCCCACCTCCTTCCACCTGCAGATaGCCAGCACCTGCACCTGCCAGGCAGGAACACACG +
Preference number: 3 (lower is better)
Translates to: KNPRFPPPSTCR*PAPAPARQEHT
Trigger: CGTGTGTTCCTGCCTGGCAGGTGCAGGTGCTGGCCATCTGCAGGTGGAAGGAGGTGGGAATCTTGGATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GGCAGAAGGAGTCCCACACCTGACACTGCGTTCTCATaGTGGGTTTTTCACCAGCTCACAGGACAGAGAGAC +
Preference number: 3 (lower is better)
Translates to: GRRSPTPDTAFS*WVFHQLTGQRD
Trigger: GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGGTGTGGGACTCCTTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp GGGTATTTCCAGTTAAACGCCCTACAGAGGGCCAGGTaGTTCTGGCAGATCCCTGCACTCACATACTGGGGA +
Preference number: 3 (lower is better)
Translates to: GYFQLNALQRAR*FWQIPALTYWG
Trigger: TCCCCAGTATGTGAGTGCAGGGATCTGCCAGAACCACCTGGCCCTCTGTAGGGCGTTTAACTGGAAATACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 72 bp GATAAGACAGCAGGTCTCGCCCTGAGCATGCGAACATaGTGGCAATTAGGAGGCTTTCCTCCTCAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: DKTAGLALSMRT*WQLGGFPPQRP
Trigger: AGGCCTCTGAGGAGGAAAGCCTCCTAATTGCCATCATGTTCGCATGCTCAGGGCGAGACCTGCTGTCTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR GCA 72 bp GCTTCAAAGCTGCTCTTGGCCCAGCACAGACCTTACTaGGTTAGCATCTTCCTCAAGTCACTCGGCGGATTC +
Preference number: 3 (lower is better)
Translates to: ASKLLLAQHRPY*VSIFLKSLGGF
Trigger: GAATCCGCCGAGTGACTTGAGGAAGATGCTAACGCAGTAAGGTCTGTGCTGGGCCAAGAGCAGCTTTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTaGCTGGTGATCTCAAGATGGAGACATCCCTCACTT +
Preference number: 3 (lower is better)
Translates to: GLWPLTWCRQLS*LVISRWRHPSL
Trigger: AAGTGAGGGATGTCTCCATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp AACAGGACCAGCACGAAACAGATGCAGCCTACACAGTaGTGTAGGACCGAGGCTCACAAACATCCACATGGC +
Preference number: 3 (lower is better)
Translates to: NRTSTKQMQPTQ*CRTEAHKHPHG
Trigger: GCCATGTGGATGTTTGTGAGCCTCGGTCCTACAGCACTGTGTAGGCTGCATCTGTTTCGTGCTGGTCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTACCCACCTTGGAAGATaGGCAGCTTCCAGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: FSDTRHERPELNHIAFIVTHLGR*AASRVA
Trigger: GGCCACCCTGGAAGCTGCCAATCTTCCAAGGTGGGT...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp TCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATGCCGGGAGTCTGGCTTaGTGGCCCATCCCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: SSSEASCGFPQLIVPYFHAGSLA*WPIPGR
Trigger: TCTGCCTGGGATGGGCCACAAAGCCAGACTCCCGGC...ATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR TCA 72 bp GGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTaGTCTCAAGATGGAGACATCCCTCACTTACTCATC +
Preference number: 3 (lower is better)
Translates to: GLLPGAGNSLAW*SQDGDIPHLLI
Trigger: GATGAGTAAGTGAGGGATGTCTCCATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp TCGGAGGGCAGGAAGGACAAGGAAAAGAGCTCCAGCTaGCAGAACACTCTCAACCTCCTCTCTTTGCATAGT +
Preference number: 3 (lower is better)
Translates to: SEGRKDKEKSSS*QNTLNLLSLHS
Trigger: ACTATGCAAAGAGAGGAGGTTGAGAGTGTTCTGGCAGCTGGAGCTCTTTTCCTTGTCCTTCCTGCCCTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GGTCCAAAGTTCTCGTTTCCCTGTCTGCACATAACCTaGTCTGCTCACTCACAAACTCCAGTTCCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: GPKFSFPCLHIT*SAHSQTPVPLL
Trigger: GAGCAGGGGAACTGGAGTTTGTGAGTGAGCAGAGCAGGTTATGTGCAGACAGGGAAACGAGAACTTTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGGGAGGCCCAGGAGCCTaGTGGGGAAGGGAGCCGGGT +
Preference number: 3 (lower is better)
Translates to: DFKKDPIVEFILTVYREKGGPGA*WGREPG
Trigger: ACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCCTCC...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCTTAAAAAGGATCCTATaGTGGAATTCATCCTTACGG +
Preference number: 3 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVLKRIL*WNSSLR
Trigger: CCGTAAGGATGAATTCCACAATAGGATCCTTTTTAA...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp CTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATGGACAGAGGGCATGGTCTaGCACCTCTTGGTGGCCTCC +
Preference number: 3 (lower is better)
Translates to: LLRGLLWLSTTYCPIFSWTEGMV*HLLVAS
Trigger: GGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGT...CCATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR-3UTR CAA 90 bp TCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATACAGAGGGCATGGTCTaGCACCTCTTGGTGGCCTCC +
Preference number: 3 (lower is better)
Translates to: SSSEASCGFPQLIVPYFHTEGMV*HLLVAS
Trigger: GGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGT...ATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR GCA 72 bp ATTGCGCCAGAGAGCTCAGGATTTACGGGAGGCGCCTaGAGGGACAGCCATTCTCCTAATTCTTGCTTAATA +
Preference number: 3 (lower is better)
Translates to: IAPESSGFTGGA*RDSHSPNSCLI
Trigger: TATTAAGCAAGAATTAGGAGAATGGCTGTCCCTGCAGGCGCCTCCCGTAAATCCTGAGCTCTCTGGCGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp GCAGATATTCAGGGCGAAACAGTGAAAGGGAGGCAGTaGGTCACAGGCGTAATCTACAGCAATAGCGGTTTC +
Preference number: 3 (lower is better)
Translates to: ADIQGETVKGRQ*VTGVIYSNSGF
Trigger: GAAACCGCTATTGCTGTAGATTACGCCTGTGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAATATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CCA 72 bp CTGGAAGGCATATCCCACCAGAAATGGGTTTCCTGTTaGACAAAGACCAGAAATGGCCCCGCAGTATACTGG +
Preference number: 3 (lower is better)
Translates to: LEGISHQKWVSC*TKTRNGPAVYW
Trigger: CCAGTATACTGCGGGGCCATTTCTGGTCTTTGTCCAACAGGAAACCCATTTCTGGTGGGATATGCCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp ACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCAAAAATGAACGCACCTaGTGGTACGGCCTCAAGGAA +
Preference number: 3 (lower is better)
Translates to: TRTFSNRGGRLDLVSNSFKNERT*WYGLKE
Trigger: TTCCTTGAGGCCGTACCACAAGGTGCGTTCATTTTT...GAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR GCA 72 bp ATATCATACAAGTCAACAGGACCAGCACGAAACAGATaGAGCCTACACAGTGCTGTAGGACCGAGGCTCACA +
Preference number: 3 (lower is better)
Translates to: ISYKSTGPARNR*SLHSAVGPRLT
Trigger: TGTGAGCCTCGGTCCTACAGCACTGTGTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTATGACGGCTCGAGCTaGACACAGGTTCTCCCAGCT +
Preference number: 3 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYYDGSS*TQVLPA
Trigger: AGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCATA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CCA 72 bp TCGCTTCAGGGCATTTTTCAACAAAGAACGCACTCCTaGCAAGCGAGTCTTTCTAGAAGACACTGGAATGGC +
Preference number: 3 (lower is better)
Translates to: SLQGIFQQRTHS*QASLSRRHWNG
Trigger: GCCATTCCAGTGTCTTCTAGAAAGACTCGCTTGCCAGGAGTGCGTTCTTTGTTGAAAAATGCCCTGAAGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 72 bp GTCCAAGAACTAAAGCTGATGTGGGGACTCAGCCTCTaGAACGAGCTCAAAGAACCAAGAATCAAAGCTTGC +
Preference number: 3 (lower is better)
Translates to: VQELKLMWGLSL*NELKEPRIKAC
Trigger: GCAAGCTTTGATTCTTGGTTCTTTGAGCTCGTTTCAGAGGCTGAGTCCCCACATCAGCTTTAGTTCTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp AATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTaGCAATGCCCAAGGTTACCTTCCTGGATGAGAAAC +
Preference number: 3 (lower is better)
Translates to: NSNLDPSHRETH*QCPRLPSWMRN
Trigger: GTTTCTCATCCAGGAAGGTAACCTTGGGCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR TCA 72 bp CTAGATGAAGCTCCGGTTAAAGTTCTAAATCAGGAATaGCGCAGCCATGAAGTTAAAGGCATCCAGAAGGTC +
Preference number: 3 (lower is better)
Translates to: LDEAPVKVLNQE*RSHEVKGIQKV
Trigger: GACCTTCTGGATGCCTTTAACTTCATGGCTGCGTCATTCCTGATTTAGAACTTTAACCGGAGCTTCATCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR GCA 72 bp CTAAACGAGCAGCAAAGTAAGAACCAAAAGTTCGAATaGGGGAACAAAGAGGCTATGGTCAGAATGACAGTA +
Preference number: 3 (lower is better)
Translates to: LNEQQSKNQKFE*GNKEAMVRMTV
Trigger: TACTGTCATTCTGACCATAGCCTCTTTGTTCCCGCATTCGAACTTTTGGTTCTTACTTTGCTGCTCGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR-3UTR CAA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGAAGAGAAGTTTCAGATaGCGCCAGAGAGCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: DFKKDPIVEFILTVYREKKRSFR*RQRAQD
Trigger: ATCCTGAGCTCTCTGGCGCAATCTGAAACTTCTCTT...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGCCGTCACCCCAGCCTaGCCAAGGGCCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPAVTPA*PRAWEL
Trigger: CAGCTCCCAGGCCCTTGGGCAGGCTGGGGTGACGGC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAACGGAGGGAGCGGGCTaGGCCGCCGTCCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPTEGAG*AAVLPL
Trigger: CAATGGGAGGACGGCGGCGCAGCCCGCTCCCTCCGT...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCAGCCGGCCAGGGAGTCTGGCCCGGCCTGGCCCCTCGCTGGTGTCCGTCGGCACCTCTGCCCTGGGCTTaGAGACGGCATTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PAGQGVWPGLAPRWCPSAPLPWA*RRHCLP
Trigger: AGGGAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGG...TGCCGACGGACACCAGCGAGGGGCCAGGCCGGGCCAGACTCCCTGGCCGGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCACTGCGACTCTGGCTCTaGCGCGCGGCGGACCCGATC +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPLRLWL*RAADPI
Trigger: GATCGGGTCCGCCGCGCGCCAGAGCCAGAGTCGCAG...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR TCA 90 bp TCCCAGCCGGCCAGGGAGTCTGGCCCGGCCTGGCCCCTCGCTGGTGTCCGTCGGGCCCACCCAGAGCCCTaGTGGCCTCTTTTAACCTGC +
Preference number: 4 (lower is better)
Translates to: SQPARESGPAWPLAGVRRAHPEP*WPLLTC
Trigger: GCAGGTTAAAAGAGGCCATCAGGGCTCTGGGTGGGC...CCGACGGACACCAGCGAGGGGCCAGGCCGGGCCAGACTCCCTGGCCGGCTGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCACCTGCACTCACATACTaGGGAGGCCGCCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPPALTY*GGRLPA
Trigger: GGCGGGGAGGCGGCCTCCCCAGTATGTGAGTGCAGG...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCACTGCCCCGACACAGGTaGCCCCATCGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPLPRHR*PHRRAG
Trigger: TCCTGCCCTCCGATGGGGCCACCTGTGTCGGGGCAG...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAGCAGGGACCTGGCCCTaGCTCTGGTCTGGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPAGTWP*LWSGGN
Trigger: GTTGCCGCCAGACCAGAGCCAGGGCCAGGTCCCTGC...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAGGGAGCCAGGCGCCCTaGTGCACGCTCGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPGSQAP*CTLVKT
Trigger: TGTCTTCACGAGCGTGCATCAGGGCGCCTGGCTCCC...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCACCACGCGGAGCCAGCTaGGGACTCACGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPPRGAS*GLTSML
Trigger: GAGCATGGACGTGAGTCCTCAGCTGGCTCCGCGTGG...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GCAGAAGTGCGAGCAGCAGCCTCGAGGCGGCGAGGCCTGCGCCAGGTGGGCTCTACCAGGGCTGGTTCCTaGGGCCTCTGCCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: AEVRAAASRRRGLRQVGSTRAGS*GLCPGL
Trigger: AAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTGGT...AGAGCCCACCTGGCGCAGGCCTCGCCGCCTCGAGGCTGCTGCTCGCACTTCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR GCA 90 bp GCCAGGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGCCGGCTCCCCTCGGCTaGGACTCTGGCTCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: ARRLQFSYCPGHGGPRSRPAPLG*DSGSGA
Trigger: CGCGCCAGAGCCAGAGTCGCAGCCGAGGGGAGCCGG...CCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398081.5
CDS-3UTR GCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAGAGACACCAACGCGCTaGGTGTCACGGGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPETPTR*VSRASG
Trigger: GCCGCTTGCCCGTGACACGCAGCGCGTTGGTGTCTC...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGGGGCTGCAACGGGCCTaGCACCCGTGTCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRGLQRA*HPCPRS
Trigger: GCTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCC...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGCTGTCACGCCACGATaGCTGCTGGGTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPAVTPR*LLGPAG
Trigger: CCCTGCAGGACCCAGCAGGCATCGTGGCGTGACAGC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCCAGGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGCCTCGGCTGCGACTCTaGCTCTGGCGCGCGGCGGAC +
Preference number: 4 (lower is better)
Translates to: ARRLQFSYCPGHGGPRSRPRLRL*LWRAAD
Trigger: GTCCGCCGCGCGCCAGAGCCAGAGTCGCAGCCGAGG...CCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398081.5
CDS-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCATGCACACCCCAGAGCTaGGATGCAGGGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPCTPQS*DAGLQG
Trigger: CCCCTGCAGCCCTGCATCCCAGCTCTGGGGTGTGCA...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGCTGCCCCGACACAGGTaGCCCCATCGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPLPRHR*PHRRAG
Trigger: TCCTGCCCTCCGATGGGGCCACCTGTGTCGGGGCAG...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGACCTGGCCCTGGCTCTaGTCTGGCGGCAACCCCTGC +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPTWPWL*SGGNPC
Trigger: GCAGGGGTTGCCGCCAGACCAGAGCCAGGGCCAGGT...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCACCTTCACGGAGATGCTaGCTTCGCAGGCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPPSRRC*LRRPVG
Trigger: GCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGG...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCCCAGCCGGCCAGGGAGTCTGGCCCGGCCTGGCCCCTCGCTGGTGTCCGTCGGCTGTGGGATGTGGGATaGGCCCAGAGCCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: SQPARESGPAWPLAGVRRLWDVG*AQSPQE
Trigger: TTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAG...CCGACGGACACCAGCGAGGGGCCAGGCCGGGCCAGACTCCCTGGCCGGCTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGTGTGAAGGAGGCCCATaGGACCAGGCAGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPCEGGP*DQAGGR
Trigger: CCTGCCGCCTGCCTGGTCTCATGGGCCTCCTTCACA...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCATGTCCGTCCCAGCACTaGCGGGCAGGACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPCPSQH*RAGQRC
Trigger: GCATCTCTGTCCTGCCCGTCAGTGCTGGGACGGACA...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCCAGTGGCTCTGGGCTaGAACGGGCCTGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLPVALG*NGPATR
Trigger: ACGGGTGGCAGGCCCGTTGCAGCCCAGAGCCACTGG...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCACAGGGCCTTGCACCGTaGACCTACTGTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPQGLAP*TYCGLC
Trigger: GCAGAGCCCACAGTAGGTGCACGGTGCAAGGCCCTG...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGTCTGGCGGCAACCCCTaGTGGCAGAGGCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPSGGNP*WQRQEV
Trigger: CACCTCCTGCCTCTGCCAGCAGGGGTTGCCGCCAGA...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCAGAAGTGCGAGCAGCAGCCTCGAGGCGGCGAGGCCTGCGCCAGGTGGGCTCTCAGGCTCCTTCCCAGTaGCCTCAGTCCGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AEVRAAASRRRGLRQVGSQAPSQ*PQSGKL
Trigger: GAGCTTCCCGGACTGAGGGCACTGGGAAGGAGCCTG...AGAGCCCACCTGGCGCAGGCCTCGCCGCCTCGAGGCTGCTGCTCGCACTTCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp GCCAGGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGCTGCGACTCTGGCTCTaGCGCGCGGCGGACCCGATC +
Preference number: 4 (lower is better)
Translates to: ARRLQFSYCPGHGGPRSRLRLWL*RAADPI
Trigger: GATCGGGTCCGCCGCGCGCCAGAGCCAGAGTCGCAG...CCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398081.5
CDS-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTCCTCGGCTGCGACTCTaGCTCTGGCGCGCGGCGGAC +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSPRLRL*LWRAAD
Trigger: GTCCGCCGCGCGCCAGAGCCAGAGTCGCAGCCGAGG...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR CCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGCCCTGTAGGGACCAGTaGCTCTGGGCTGCAACGGGC +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPPCRDQ*LWAATG
Trigger: GCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGG...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGCCTGCACTCACATACTaGGGAGGCCGCCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRPALTY*GGRLPA
Trigger: GGCGGGGAGGCGGCCTCCCCAGTATGTGAGTGCAGG...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAACGAACATGCCCGGGTaGAAACGGGCCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPTNMPG*KRAVDR
Trigger: CCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGT...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCACCTTCCACCTGCAGATaGCCAGCACCTGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPPSTCR*PAPAPA
Trigger: GGCAGGTGCAGGTGCTGGCCATCTGCAGGTGGAAGG...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAAGAGACCGTGCACCCTaGTGGGTGATGGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPRDRAP*WVMGCP
Trigger: CGGGCATCCCATCACCCACCAGGGTGCACGGTCTCT...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CAA 72 bp CCGGCCACTCCAGGCAAACGAAGCCACCCCCGAACCTaGCAGAGGCCGCACTCCCTCAGCAGGGGGACCACG +
Preference number: 4 (lower is better)
Translates to: PATPGKRSHPRT*QRPHSLSRGTT
Trigger: CGTGGTCCCCCTGCTGAGGGAGTGCGGCCTCTGCAAGGTTCGGGGGTGGCTTCGTTTGCCTGGAGTGGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGGGGCTCTGCCTTCTCTaGCACCAGGCACGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRGLCLL*HQAREA
Trigger: GGCCTCTCGTGCCTGGTGTCAGAGAAGGCAGAGCCC...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp TCCCAGCCGGCCAGGGAGTCTGGCCCGGCCTGGCCCCTCGCTGGTGTCCGTCGGCACGGTGTGGAAAAATaGACGCACCTTGTGGTACGG +
Preference number: 4 (lower is better)
Translates to: SQPARESGPAWPLAGVRRHGVEK*THLVVR
Trigger: CCGTACCACAAGGTGCGTTCATTTTTCCACACCGTG...CCGACGGACACCAGCGAGGGGCCAGGCCGGGCCAGACTCCCTGGCCGGCTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGCACAATCAGGTAGTTaGTGCCCTGCGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPAQSGS*CPAGRA
Trigger: TGCCCTCCCCGCAGGGCAGCAACTACCTGATTGTGC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTGCCGTCACCCCAGCCTaGCCAAGGGCCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSAVTPA*PRAWEL
Trigger: CAGCTCCCAGGCCCTTGGGCAGGCTGGGGTGACGGC...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCGGGCTGCAACGGGCCTaGCACCCGTGTCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSGLQRA*HPCPRS
Trigger: GCTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCC...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAAAACATGGACACTGCTaGCCCGACACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPKHGHC*PDTGGP
Trigger: GGGGCCACCTGTGTCGGGGCAGCAGTGTCCATGTTT...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCAGAAGTGCGAGCAGCAGCCTCGAGGCGGCGAGGCCTGCGCCAGGTGGGCTCTTGTGAAACTGAAGCCTaGAGGCGTGCGCCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: AEVRAAASRRRGLRQVGSCETEA*RRAPRL
Trigger: GAGACGGGGCGCACGCCTGCAGGCTTCAGTTTCACA...AGAGCCCACCTGGCGCAGGCCTCGCCGCCTCGAGGCTGCTGCTCGCACTTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCAGGGACCAGTGGCTCTaGGCTGCAACGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLRDQWL*AATGLP
Trigger: TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCT...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCCCAGCCACGCACTGTaGAGCGTGGCACAGGCCACA +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLPSHAL*SVAQAT
Trigger: TGTGGCCTGTGCCACGCTCCACAGTGCGTGGCTGGG...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGATGCATGGGGTGAGTaGCCCTGTGGCACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPDAWGE*PCGTGR
Trigger: CCTTCCAGTGCCACAGGGCCACTCACCCCATGCATC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGCCGGCCAGGGAGTCTGGCCCGGCCTGGCCCCTCGCTGGTGTCCGTCGGCAAATGAACGCACCTTGTaGTACGGCCTCAAGGAACGG +
Preference number: 4 (lower is better)
Translates to: PAGQGVWPGLAPRWCPSANERTL*YGLKER
Trigger: CCGTTCCTTGAGGCCGTACCACAAGGTGCGTTCATT...TGCCGACGGACACCAGCGAGGGGCCAGGCCGGGCCAGACTCCCTGGCCGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGACGGCTCCTCCCCATaGACTGGCTCAAACCCGAAG +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPDGSSP*TGSNPK
Trigger: CTTCGGGTTTGAGCCAGTCCATGGGGAGGAGCCGTC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467908.1
CDS-3UTR TCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAGGATTCCTCCTCCTCTaGCTCCCCAGCACAATCAGG +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPGFLLL*LPSTIR
Trigger: CCTGATTGTGCTGGGGAGTCAGAGGAGGAGGAATCC...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGTCTGCAGACCGACTTaGATTTGCTGGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPVCRPT*ICWGLG
Trigger: TCCCAGGCCCCAGCAAATTCAAGTCGGTCTGCAGAC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCGGGCTGCAACGGGCCTaGCACCCGTGTCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVGLQRA*HPCPRS
Trigger: GCTCCGAGGACACGGGTGGCAGGCCCGTTGCAGCCC...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCACCAAGAATCAAAGCTTaGTCGCCAGGGCACACCGCC +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPPRIKA*SPGHTA
Trigger: GGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGG...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGCAGGAGAGACGAACATaGCCGGGTGGAAACGGGCCG +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRQERRT*PGGNGP
Trigger: CGGCCCGTTTCCACCCGGGCATGTTCGTCTCTCCTG...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCAGGTATCCTCCCCTGTaGTGGGAGTCCGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLRYPPL*WESGVG
Trigger: CCCCACTCCGGACTCCCAGCACAGGGGAGGATACCT...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCTCACGCCACGATGCCTaGTGGGTCCTGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLSRHDA*WVLQGQ
Trigger: CTGTCCCTGCAGGACCCAGCAGGCATCGTGGCGTGA...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TCCCAGCCGGCCAGGGAGTCTGGCCCGGCCTGGCCCCTCGCTGGTGTCCGTCGGTGGAGGCAGAAAGATTaGTTCAGCCCAGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SQPARESGPAWPLAGVRRWRQKD*FSPGGQ
Trigger: TTGACCTCCTGGGCTGAAGCAATCTTTCTGCCTCCA...CCGACGGACACCAGCGAGGGGCCAGGCCGGGCCAGACTCCCTGGCCGGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCGGCCCAGGAGCCTTGTaGGGAAGGGAGCCGGGTTTT +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLGPGAL*GREPGF
Trigger: AAAACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCC...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGGGAACACCCCCGAGATaGCAAACAGGGGCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPGTPPR*QTGARL
Trigger: AAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCC...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCCGTGTCTGACTCACTaGCTGAGGTGGGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLPCLTH*LRWGSQ
Trigger: CTGGCTCCCCCACCTCAGCCAGTGAGTCAGACACGG...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTCCTGCACTCACATACTaGGGAGGCCGCCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSPALTY*GGRLPA
Trigger: GGCGGGGAGGCGGCCTCCCCAGTATGTGAGTGCAGG...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCCTCAGCGGAAGCCGCTaGCCTGGCAGTGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSLSGSR*PGSERR
Trigger: CCGCCTCTCACTGCCAGGCCAGCGGCTTCCGCTGAG...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTCTCAGCGGAAGCCGCTaGCCTGGCAGTGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSLSGSR*PGSERR
Trigger: CCGCCTCTCACTGCCAGGCCAGCGGCTTCCGCTGAG...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGTATCCTCCCCTGTGCTaGGAGTCCGGAGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRYPPLC*ESGVGT
Trigger: CGTCCCCACTCCGGACTCCCAGCACAGGGGAGGATA...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTACCTGGCCCTGGCTCTaGTCTGGCGGCAACCCCTGC +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSTWPWL*SGGNPC
Trigger: GCAGGGGTTGCCGCCAGACCAGAGCCAGGGCCAGGT...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGTGGCCCTGTGGCACTaGAAGGCATATCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPVALWH*KAYPTR
Trigger: TCTGGTGGGATATGCCTTCCAGTGCCACAGGGCCAC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCCAGGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGGCCCACTGTGGGATGTaGGATGGGCCCAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ARRLQFSYCPGHGGPRSRAHCGM*DGPRAH
Trigger: GTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGC...CCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGGGATTCCTCCTCCTCTaGCTCCCCAGCACAATCAGG +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPGFLLL*LPSTIR
Trigger: CCTGATTGTGCTGGGGAGTCAGAGGAGGAGGAATCC...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCTGCTGCACCACGGATaGGGGGAGCTTCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLLLHHG*GELPQG
Trigger: TCCTTGTGGAAGCTCCCCTCATCCGTGGTGCAGCAG...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGCCTCATGGGGACCTATaGCGGCTCGAGCTTGACACA +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPPHGDL*RLELDT
Trigger: TGTGTCAAGCTCGAGCCGTCATAGGTCCCCATGAGG...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCCCACGCGGAGCCAGCTaGGGACTCACGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSPRGAS*GLTSML
Trigger: GAGCATGGACGTGAGTCCTCAGCTGGCTCCGCGTGG...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp TGGCTTTGTGGCCCATCCCAGGCAGAAGCTGCCCACGTGACCACCCCAGTAACAGCAGACGCCTCCTTCTaGCCTCAGCGGGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: WLCGPSQAEAAHVTTPVTADASF*PQRAAP
Trigger: CGGAGCCGCCCGCTGAGGTCAGAAGGAGGCGTCTGC...TGTTACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGATGGGCCACAAAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398081.5
CDS-3UTR GCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGCCGGCTCCCCTCGGCTaGGACTCTGGCTCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKPAPLG*DSGSGA
Trigger: CGCGCCAGAGCCAGAGTCGCAGCCGAGGGGAGCCGG...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR GCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCTCGGGGCCCATAGAGTaGAGCATGTCCATCACCCGC +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLSGPIE*SMSITR
Trigger: GCGGGTGATGGACATGCTGCACTCTATGGGCCCCGA...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCACCTCGATGTCCCTTTTaGTCTGCACCATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPPRCPF*SAPSAA
Trigger: AGCTGCGGATGGTGCAGAGCAAAAGGGACATCGAGG...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGACTTGTCAGAGCTGGTaGTGTGGCCTCTGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPTCQSW*CGLCRH
Trigger: GTGACGGCAGAGGCCACAGCACCAGCTCTGACAAGT...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCATGGCCTCTTACCTGGTaGAGGCAACTCTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPWPLTW*RQLSCL
Trigger: CAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCA...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCAGCATCCATCTGAGTaGTCGGTGGACGGACACGGG +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLQHPSE*SVDGHG
Trigger: CCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTG...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCAGATGGCCAGCACCTaGACCTGCCAGGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLQMAST*TCQAGT
Trigger: TGTTCCTGCCTGGCAGGTGCAGGTGCTGGCCATCTG...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGCAGATGGCCAGCACCTaGACCTGCCAGGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRQMAST*TCQAGT
Trigger: TGTTCCTGCCTGGCAGGTGCAGGTGCTGGCCATCTG...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGGAAGGGGACATCTCTTaGTCTGGGACAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPEGDIS*SGTGSC
Trigger: GCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTTC...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAGAACGTCAGCACCTCTaGCTCCCATCACCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPERQHL*LPSPRR
Trigger: CCTTCTTGGTGATGGGAGGCAGAGGTGCTGACGTTC...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGCCTGCAGCGGGAACGTaGCCGCCCGGTTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: LWDVGWAQSPQEPSPTGEPAAGT*PPGCPR
Trigger: ACGTGGGCAACCGGGCGGCCACGTTCCCGCTGCAGG...CTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398081.5
CDS-3UTR CCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGCAAGGCTTCCTCCTaGCTGTGGATCTTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLRKASS*LWIFRP
Trigger: TGGCCGGAAGATCCACAGCCAGGAGGAAGCCTTGCG...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGAGGGACCAGTGGCTCTaGGCTGCAACGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWARDQWL*AATGLP
Trigger: TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCT...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCGGTGGAAACGGGCCGTaGACAGGGCAGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSGGNGP*TGQAPA
Trigger: AGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACC...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCACACACAGCTCTCACCTaGACTCAGAAAGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPHTALT*TQKARS
Trigger: GGACCTGGCTTTCTGAGTCCAGGTGAGAGCTGTGTG...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTTCCGGGCAGTGGACTTaGCCTCCCACAGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSSGQWT*PPTATL
Trigger: GAGGGTGGCTGTGGGAGGCCAAGTCCACTGCCCGGA...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGCTGGGAGTCCGGAGTaGGGACGGTGTCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRAGSPE*GRCPPR
Trigger: TCTGGGTGGACACCGTCCCCACTCCGGACTCCCAGC...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCTATCCGCCAGACACTaGGCTTGCCCTTGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLLSARH*ACPCCP
Trigger: CGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAG...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCACCAGGGGCTGGGTCTTaGGTTAGAAAGTCACTCGAG +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPPGAGS*VRKSLE
Trigger: CTCGAGTGACTTTCTAACCCAAGACCCAGCCCCTGG...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCCCAGGCAGAAGCTGCCCACGTGACCACCCCAGTAACAACCCTGGGCAGGAGGAGGCCTGCGCCAGGTaGGCTCTGCAGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: IPGRSCPRDHPSNNPGQEEACAR*ALQALG
Trigger: CCCAAGTGCCTGCAGAGCCCACCTGGCGCAGGCCTC...CTCCTGCCCAGGGTTGTTACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp GCAGAAGCTGCCCACGTGACCACCCCAGTAACAACCCTGGGCAGGAGGTGGGCGGCGGCCCAAGGAGCCTaGCACTCCTGTCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: AEAAHVTTPVTTLGRRWAAAQGA*HSCQIP
Trigger: TGGGATCTGACAGGAGTGCCAGGCTCCTTGGGCCGC...CGCCCACCTCCTGCCCAGGGTTGTTACTGGGGTGGTCACGTGGGCAGCTTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp GGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCGCCCACTGTGGGATGTaGGATGGGCCCAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GGSNSPTVLGTGVQGPGVAHCGM*DGPRAH
Trigger: GTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGC...GACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CAA 72 bp TCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTaGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SHPPIRQTLGLP*LSVPALTGRTE
Trigger: CTCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CAA 72 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTaGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLG*PLLSVPALTGR
Trigger: CCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCATCTCACAGGCCACCTTaGGGTTATTGGGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPSHRPP*GYWGAC
Trigger: ACAAGCACCCCAATAACCTCAAGGTGGCCTGTGAGA...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGCTTCCACAAGGAACCTaGCGGGGTGGTTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRLPQGT*RGGSLE
Trigger: CTCCAGAGAACCACCCCGTCAGGTTCCTTGTGGAAG...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGCAGGGAGGTCACTGCTaGGCAGAGGATGATAGGACT +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPQGGHC*AEDDRT
Trigger: AGTCCTATCATCCTCTGCTCAGCAGTGACCTCCCTG...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGATGTCCGTCCCAGCACTaGCGGGCAGGACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRCPSQH*RAGQRC
Trigger: GCATCTCTGTCCTGCCCGTCAGTGCTGGGACGGACA...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CAGGGAACCAACAACGCAGCTTGTGTGGAACACCCGTGTCCCTGCCGGGAGTCTAACCCGTCCACCCGCTaGCCTCCAGCTCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QGTNNAACVEHPCPCRESNPSTR*PPAPQA
Trigger: AGCCTGCGGAGCTGGAGGTCAGCGGGTGGACGGGTT...AGACTCCCGGCAGGGACACGGGTGTTCCACACAAGCTGCGTTGTTGGTTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR TCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGGCAGACGCCTCCTTCTaGCCTCAGCGGGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKADASF*PQRAAP
Trigger: CGGAGCCGCCCGCTGAGGTCAGAAGGAGGCGTCTGC...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGTCAAATCCCAAAACCTaGAGCGGGAACGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRSNPKT*SGNVAA
Trigger: GGCGGCCACGTTCCCGCTGCAGGTTTTGGGATTTGA...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGACCAGCCTGGGGTTCTaGTGCTTCAGCTCCTGCACA +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRTSLGF*CFSSCT
Trigger: TGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCTGGT...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR GCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGCAAACAGGTCCCCAGTaGCCACAAAGACGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRQTGPQ*PQRRRP
Trigger: TGGACGCCGTCTTTGTGGGCACTGGGGACCTGTTTG...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCTCCAGGGTGGCCTCTTaGCCCTGGGCATTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSSRVAS*PWAFGG
Trigger: CCCACCAAATGCCCAGGGGCAAGAGGCCACCCTGGA...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTCAGGAGAGACGAACATaGCCGGGTGGAAACGGGCCG +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSQERRT*PGGNGP
Trigger: CGGCCCGTTTCCACCCGGGCATGTTCGTCTCTCCTG...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCTCTGGCGGCAACCCCTaGTGGCAGAGGCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVSGGNP*WQRQEV
Trigger: CACCTCCTGCCTCTGCCAGCAGGGGTTGCCGCCAGA...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCAGCAGGAGAGACCGTaGACCCTGGTGGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAQQERP*TLVGDG
Trigger: CCCATCACCCACCAGGGTGCACGGTCTCTCCTGCTG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCGCCCTCACAGCACCGTaGCCTGGACGACGATCTCTG +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSALTAP*PGRRSL
Trigger: CAGAGATCGTCGTCCAGGCCACGGTGCTGTGAGGGC...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGCCCTCACAGCACCGTaGCCTGGACGACGATCTCTG +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRALTAP*PGRRSL
Trigger: CAGAGATCGTCGTCCAGGCCACGGTGCTGTGAGGGC...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGATGGCAGCTTCCAGGGTaGCCTCTTGCCCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRWQLPG*PLAPGH
Trigger: ATGCCCAGGGGCAAGAGGCCACCCTGGAAGCTGCCA...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCAGCCGTGGGTTCCCTaGAGACACAAACCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLQPWVP*RHKPLH
Trigger: GTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTG...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAAGGGACCAGTGGCTCTaGGCTGCAACGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRRDQWL*AATGLP
Trigger: TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCT...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCCCTTCCACCTGCAGATaGCCAGCACCTGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSPSTCR*PAPAPA
Trigger: GGCAGGTGCAGGTGCTGGCCATCTGCAGGTGGAAGG...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCGCCCTGGCTCTGGTCTaGCGGCAACCCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPALALV*RQPLLA
Trigger: TGCCAGCAGGGGTTGCCGCCAGACCAGAGCCAGGGC...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGGGGATGCCCGGGCAGTaGCTTGGACACAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAGMPGQ*LGHSCH
Trigger: GTGACAGCTGTGTCCAAGCCACTGCCCGGGCATCCC...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTGGGATGCCCGGGCAGTaGCTTGGACACAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSGMPGQ*LGHSCH
Trigger: GTGACAGCTGTGTCCAAGCCACTGCCCGGGCATCCC...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGAGGTCACCACACACCTaGCACCCTCCAAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWARSPHT*HPPRAH
Trigger: GTGGGCCCTTGGAGGGTGCCAGGTGTGTGGTGACCT...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCCTGAGGCCTCTGCCCTaGGCTTGCAGACGGCATTGC +
Preference number: 4 (lower is better)
Translates to: GGSNSPTVLGTGVQGPGVLRPLP*ACRRHC
Trigger: GCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAG...GACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CAA 72 bp TCACCAGGGCTGGTTCCTGAGGCCTCTGCCCTGGGCTaGCAGACGGCATTGCCTCCCTGTTTCCTCATGGGG +
Preference number: 4 (lower is better)
Translates to: SPGLVPEASALG*QTALPPCFLMG
Trigger: CCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACCACGTAGCCGCGGATaGCGTGGCTCTGTATGGAGA +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRPRSRG*RGSVWR
Trigger: TCTCCATACAGAGCCACGTCATCCGCGGCTACGTGG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR TCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGCTCCTGGAGCTCATCTaGATTCAGCACTTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPLLELI*IQHLAL
Trigger: AAGGGCCAAGTGCTGAATTCAGATGAGCTCCAGGAG...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAGCCTGGGAAGGTCCCTaGTGCTGCACCGTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRAWEGP*CCTVCL
Trigger: GAGACACACGGTGCAGCATCAGGGACCTTCCCAGGC...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCACTCTCCTGGTTCGGCTaGTACAGCCAAAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPLSWFG*YSQRKQ
Trigger: CTGTTTTCTTTGGCTGTATCAGCCGAACCAGGAGAG...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAGCTTGCAGCTCAAAATaGGGACAAAGGCGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPACSSK*GQRRFH
Trigger: ATGGAAGCGCCTTTGTCCTCATTTTGAGCTGCAAGC...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGATGCCTCCGAAGAGCTaGGCTCCATTCCACGGAGGG +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAMPPKS*APFHGG
Trigger: CCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCAT...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp TGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTGAGGCCTCTAGGTCAAGGCTGCAGTaGGCTGGTTGCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: WARGSKVQVSPGLVPEASRSRLQ*AGCATS
Trigger: TGAAGTGGCGCAACCAGCTCACTGCAGCCTTGACCT...AGAGGCCTCAGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp ATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTAACCCGTCCACCCGCTaGCCTCCAGCTCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: MGPEPTRTFSNRGGRLDLNPSTR*PPAPQA
Trigger: AGCCTGCGGAGCTGGAGGTCAGCGGGTGGACGGGTT...AAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp TGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTGAGGCCTCTAACCCAGTCCCACACTaGGGTGCTGGGGTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: WARGSKVQVSPGLVPEASNPVPH*GAGVKA
Trigger: AGCCTTAACCCCAGCACCTCAGTGTGGGACTGGGTT...AGAGGCCTCAGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp GGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCGCCCACCCAGAGCCCTaGTGGCCTCTTTTAACCTGC +
Preference number: 4 (lower is better)
Translates to: GGSNSPTVLGTGVQGPGVAHPEP*WPLLTC
Trigger: GCAGGTTAAAAGAGGCCATCAGGGCTCTGGGTGGGC...GACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp CTCAAAGGGGCCACTGGGAATACTGGCCACAAGGTGGAGGCTCTGCCAAGCCCAACCAGGGCTGGTTCCTaGGGCCTCTGCCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LKGATGNTGHKVEALPSPTRAGS*GLCPGL
Trigger: AAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTGGT...TGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGGGCGTGATAATGTCTaGAAGCGGCACCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPGRDNV*KRHHFF
Trigger: GAAAAAGTGGTGCCGCTTGCAGACATTATCACGCCC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCAATCAGGTAGTTGCTaGCCTGCGGGGAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAQSGSC*PAGRAG
Trigger: ACCTGCCCTCCCCGCAGGGCAGCAACTACCTGATTG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCGAATGTCCATCCGGATaGGTTCCATCACCACGGAGC +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLECPSG*VPSPRS
Trigger: GCTCCGTGGTGATGGAACGCATCCGGATGGACATTC...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCCCGGCCTGGGCTTTTaGACACTGGATGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAPGLGF*TLDGPL
Trigger: CAGAGGACCATCCAGTGTGCAAAAGCCCAGGCCGGG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGCCAGTGGCTCTGGGCTaGAACGGGCCTGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKPVALG*NGPATR
Trigger: ACGGGTGGCAGGCCCGTTGCAGCCCAGAGCCACTGG...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACAGCATCCATCTGAGTaGTCGGTGGACGGACACGGG +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRQHPSE*SVDGHG
Trigger: CCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCCAGATGGCCAGCACCTaGACCTGCCAGGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSQMAST*TCQAGT
Trigger: TGTTCCTGCCTGGCAGGTGCAGGTGCTGGCCATCTG...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCCACCTCCTTCCACCTaGAGATGGCCAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAPPPST*RWPAPA
Trigger: TGCAGGTGCTGGCCATCTGCAGGTGGAAGGAGGTGG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGGAGGACTCACGTCCATaGTCCAGAACGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRREDSRP*SRTSAP
Trigger: AGGTGCTGACGTTCTGGAGCATGGACGTGAGTCCTC...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCGCCACCCCCGAACCTTaGAGAGGCCGCACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPATPEP*RGRTPS
Trigger: TGAGGGAGTGCGGCCTCTGCAAGGTTCGGGGGTGGC...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTCCAGGAGGTCAAGGCTaGAGTGAGCTGGTTGCGCCA +
Preference number: 4 (lower is better)
Translates to: LLSWARGSKVQVSPGLVPPGGQG*SELVAP
Trigger: TGGCGCAACCAGCTCACTGCAGCCTTGACCTCCTGG...AGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GCCCTGGGCTTGCAGACGGCATTGCCTCCCTGTTTCCTCATGGGGCTGTCCCTCATCCCAGGCAGAAGCTaGCCACGTGACCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: ALGLQTALPPCFLMGLSLIPGRS*PRDHPS
Trigger: ACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGAT...GAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp TGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCCAGGCTCCTTCCCAGTaGCCTCAGTCCGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: WDVGWAQSPQEPSPTGEGQAPSQ*PQSGKL
Trigger: GAGCTTCCCGGACTGAGGGCACTGGGAAGGAGCCTG...GCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp TGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGTGGGATGGGCCCGCCATCGGGAAGGACTaGAGCCAGGCGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: WSCTSWWPPAHCGMWDGPAIGKD*SQAAPI
Trigger: AATTGGAGCCGCCTGGCTGCAGTCCTTCCCGATGGC...GGGCCCATCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACCCTGCAGCGGGAACGTaGCCGCCCGGTTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDPAAGT*PPGCPR
Trigger: ACGTGGGCAACCGGGCGGCCACGTTCCCGCTGCAGG...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR CCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCGCAAGGCTTCCTCCTaGCTGTGGATCTTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWARKASS*LWIFRP
Trigger: TGGCCGGAAGATCCACAGCCAGGAGGAAGCCTTGCG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCGCCTATAGCTATACCTaGGGGGACCCCAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLAYSYT*GDPKLW
Trigger: CCAGAGTTTGGGGTCCCCCCAGGTATAGCTATAGGC...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCAGGGCTGCAGGGGTGTaGCTGAAATCAAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSRAAGV*LKSRQA
Trigger: GGCCTGCCTTGATTTCAGCCACACCCCTGCAGCCCT...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAATTTCTCTCCAGCCGTaGGTTCCCTGGAGACACAAA +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPISLQP*VPWRHK
Trigger: TTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAAT...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCACGAACATGCCCGGGTaGAAACGGGCCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVTNMPG*KRAVDR
Trigger: CCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGT...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGACCCTCCCCAGGGCCTaGGGTCCTTCTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKTLPRA*GPSGSP
Trigger: GGGGCTCCCAGAAGGACCCCAGGCCCTGGGGAGGGT...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAACCCTCCCCAGGGCCTaGGGTCCTTCTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKTLPRA*GPSGSP
Trigger: GGGGCTCCCAGAAGGACCCCAGGCCCTGGGGAGGGT...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGGGCGGCAACCCCTGCTaGCAGAGGCAGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKGGNPC*QRQEVC
Trigger: GCACACCTCCTGCCTCTGCCAGCAGGGGTTGCCGCC...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGAGTCCCCTAGAAGGATaGCTCACGTCCATCCTACCG +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRSPLEG*LTSILP
Trigger: CGGTAGGATGGACGTGAGCCATCCTTCTAGGGGACT...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGGGCAAGGGTCAGAGATaGAAGGGGACATCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPGKGQR*KGTSLA
Trigger: AGCAAGAGATGTCCCCTTCCATCTCTGACCCTTGCC...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGACAAAGACCAGAAATaGCCCCGCAGTATACTGGTG +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPDKDQK*PRSILV
Trigger: CACCAGTATACTGCGGGGCCATTTCTGGTCTTTGTC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAGACAAAGACCAGAAATaGCCCCGCAGTATACTGGTG +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPDKDQK*PRSILV
Trigger: CACCAGTATACTGCGGGGCCATTTCTGGTCTTTGTC...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCAGGACAGAGATGCATaGGGTGAGTGGCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAQDRDA*GEWPCG
Trigger: GCCACAGGGCCACTCACCCCATGCATCTCTGTCCTG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCACCCTGGGCAGGAGGTaGGCGTGCTGGTGCACAACT +
Preference number: 4 (lower is better)
Translates to: WDVGWAQSPQEPSPTGEGTLGRR*ACWCTT
Trigger: AGTTGTGCACCAGCACGCCCACCTCCTGCCCAGGGT...GCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCTCCTGGAGCTCATCTaGATTCAGCACTTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLLLELI*IQHLAL
Trigger: AAGGGCCAAGTGCTGAATTCAGATGAGCTCCAGGAG...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCGCCTGGGAAGGTCCCTaGTGCTGCACCGTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPAWEGP*CCTVCL
Trigger: GAGACACACGGTGCAGCATCAGGGACCTTCCCAGGC...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGGGGAGCCAGGCGCCCTaGTGCACGCTCGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKGSQAP*CTLVKT
Trigger: TGTCTTCACGAGCGTGCATCAGGGCGCCTGGCTCCC...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGGTGCACCCTGGTGGGTaGTGGGATGCCCGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKVHPGG*WDARAV
Trigger: CACTGCCCGGGCATCCCATCACCCACCAGGGTGCAC...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGTGCACCCTGGTGGGTaGTGGGATGCCCGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLVHPGG*WDARAV
Trigger: CACTGCCCGGGCATCCCATCACCCACCAGGGTGCAC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAGTGCACCCTGGTGGGTaGTGGGATGCCCGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKVHPGG*WDARAV
Trigger: CACTGCCCGGGCATCCCATCACCCACCAGGGTGCAC...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTAACCCAGTCCCACACTaGGGTGCTGGGGTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: LLSWARGSKVQVSPGLVPNPVPH*GAGVKA
Trigger: AGCCTTAACCCCAGCACCTCAGTGTGGGACTGGGTT...AGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp GCAGAAGCTGCCCACGTGACCACCCCAGTAACAACCCTGGGCAGGAGGTGGGCGTTCAGGGCGAAACAGTaGAAGGGAGGCAGTGCGTCA +
Preference number: 4 (lower is better)
Translates to: AEAAHVTTPVTTLGRRWAFRAKQ*KGGSAS
Trigger: TGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAA...CGCCCACCTCCTGCCCAGGGTTGTTACTGGGGTGGTCACGTGGGCAGCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR GCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCTTGAGGTTATTGGGGTaGTTGTGTGTCCACGCCAGG +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLLRLLG*LCVHAR
Trigger: CCTGGCGTGGACACACAAGCACCCCAATAACCTCAA...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCACAGCACAGACCTTACTaGGTTAGCATCTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPQHRPY*VSIFLK
Trigger: CTTGAGGAAGATGCTAACGCAGTAAGGTCTGTGCTG...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCACAGCACAGACCTTACTaGGTTAGCATCTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPQHRPY*VSIFLK
Trigger: CTTGAGGAAGATGCTAACGCAGTAAGGTCTGTGCTG...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCCAGTGCTCAGCCTGCTaGACCACGGATGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPQCSAC*TTDEGS
Trigger: GCTCCCCTCATCCGTGGTGCAGCAGGCTGAGCACTG...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGAGCCATCCTCCTTCCTaGTGGTGTGGCGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSSHPPS*WCGGAL
Trigger: CAGGGCGCCGCCACACCAGCAGGAAGGAGGATGGCT...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGAGCCATCCTCCTTCCTaGTGGTGTGGCGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKSHPPS*WCGGAL
Trigger: CAGGGCGCCGCCACACCAGCAGGAAGGAGGATGGCT...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGTTTCCACAAAAGCCCTaGACCCACAAAGGCACCATC +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPFPQKP*THKGTI
Trigger: GATGGTGCCTTTGTGGGTGCAGGGCTTTTGTGGAAA...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGACAGCATCCATCTGAGTaGTCGGTGGACGGACACGGG +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRQHPSE*SVDGHG
Trigger: CCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTG...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCACCTCCTTCCACCTaGAGATGGCCAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVPPPST*RWPAPA
Trigger: TGCAGGTGCTGGCCATCTGCAGGTGGAAGGAGGTGG...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTTCTGGGACAGGGTCCTaGTTGGCTCAGACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSSGTGS*LAQTVG
Trigger: TCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGA...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCCCACCTTCACGGAGATaGTGGCTTCGCAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPPPSRR*WLRRPV
Trigger: CACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGG...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAACGGAGGGAGCGGGCTaGGCCGCCGTCCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRTEGAG*AAVLPL
Trigger: CAATGGGAGGACGGCGGCGCAGCCCGCTCCCTCCGT...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTAGGTGGGCGTGCTGGTaGACAACTATAGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLSWARGSKVQVSPGLVPRWACW*TTIVPA
Trigger: GGCTGGGACTATAGTTGTGCACCAGCACGCCCACCT...AGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGTGGGATGGGCTCTTGGTGGCCTCCTaGCCACTGTGGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: AWSCTSWWPPAHCGMWDGLLVAS*PLWDVG
Trigger: TCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAG...CCCATCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCCAGAGGGCATGGTCTTaGACCTCTTGGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGSNSPTVLGTGVQGPGVQRAWS*TSWWPP
Trigger: AGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTG...GACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp TGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTGAGGCCTCTCGGACTAATACAGGGTaGCATCGGGAAGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: WARGSKVQVSPGLVPEASRTNTG*HREGLQ
Trigger: CTGCAGTCCTTCCCGATGGCACCCTGTATTAGTCCG...AGAGGCCTCAGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGGCAGGTCCCAACGGCTaGCCACATGGGACGCCTCGA +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKAGPNG*PHGTPR
Trigger: TCGAGGCGTCCCATGTGGGCAGCCGTTGGGACCTGC...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467908.1
CDS-3UTR CCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCCTGCGACTCTGGCTCTaGCGCGCGGCGGACCCGATC +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPLRLWL*RAADPI
Trigger: GATCGGGTCCGCCGCGCGCCAGAGCCAGAGTCGCAG...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCTCCACGCCAGGAGCATaGCAGCAAACAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVSTPGA*QQTGPQ
Trigger: CTGGGGACCTGTTTGCTGCCATGCTCCTGGCGTGGA...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAGGAACACCCCCGAGATaGCAAACAGGGGCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRGTPPR*QTGARL
Trigger: AAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCC...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCTGGCAGCTTCCAGGGTaGCCTCTTGCCCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPWQLPG*PLAPGH
Trigger: ATGCCCAGGGGCAAGAGGCCACCCTGGAAGCTGCCA...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCGGAGCCAGGAAACATaGCTGCGAAACCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWARSQET*LRNPCL
Trigger: CAGACACGGGTTTCGCAGCCATGTTTCCTGGCTCCG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGTCCTTCCTGCTGGTGTaGCGGCGCCCTGTAGGGACC +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKSFLLV*RRPVGT
Trigger: GGTCCCTACAGGGCGCCGCCACACCAGCAGGAAGGA...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGCTCCAGCTGCTCCGTaGTTTGACAGCAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRAPAAP*FDSRQS
Trigger: AGACTGCCTGCTGTCAAACCACGGAGCAGCTGGAGC...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAATAAGCAGGCGATGTTaGACCAGTATAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPISRRC*TSIAVT
Trigger: GGTGACAGCTATACTGGTCCAACATCGCCTGCTTAT...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGATTACCCCAGGGGCTTTaGCCTCTTACCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRLPQGL*PLTWCR
Trigger: CCTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAA...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCCAGGAGGTGTGCGGCTaGAGTCAGAAACTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSQEVCG*SQKLRC
Trigger: GCACCTCAGTTTCTGACTCCAGCCGCACACCTCCTG...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGGCAGGGACCTGGCCCTaGCTCTGGTCTGGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKAGTWP*LWSGGN
Trigger: GTTGCCGCCAGACCAGAGCCAGGGCCAGGTCCCTGC...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGACAGGCCACACAAACTaGCTCCTACCACCTAACAGA +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPTGHTN*LLPPNR
Trigger: TCTGTTAGGTGGTAGGAGCCAGTTTGTGTGGCCTGT...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCGGACATCTCTTGCTCTaGGACAGGGTCCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSGHLLL*DRVLLG
Trigger: GCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCC...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTGTGGCCCTGTGGCACTaGAAGGCATATCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSVALWH*KAYPTR
Trigger: TCTGGTGGGATATGCCTTCCAGTGCCACAGGGCCAC...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGACTATCCGCCAGACACTaGGCTTGCCCTTGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRLSARH*ACPCCP
Trigger: CGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAG...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCGCTGTGGGATGTACTaGAAGGGTCTTCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWARCGMY*KGLPGL
Trigger: CAGGCCTGGAAGACCCTTCCAGTACATCCCACAGCG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCCGCTGTGGGATGTACTaGAAGGGTCTTCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSRCGMY*KGLPGL
Trigger: CAGGCCTGGAAGACCCTTCCAGTACATCCCACAGCG...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTAGCAAGCTGAGCCCCTaGGCTGGCATCTCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: LLSWARGSKVQVSPGLVPSKLSP*AGISVS
Trigger: TGAAACGGAGATGCCAGCCCAGGGGCTCAGCTTGCT...AGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp TGGCTTTGTGGCCCATCCCAGGCAGAAGCTGCCCACGTGACCACCCCAGTAACAACCCTGGGCAGGAGGTaGGCGTGCTGGTGCACAACT +
Preference number: 4 (lower is better)
Translates to: WLCGPSQAEAAHVTTPVTTLGRR*ACWCTT
Trigger: AGTTGTGCACCAGCACGCCCACCTCCTGCCCAGGGT...TGTTACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGATGGGCCACAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp CTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCTCTGCAGGCACTTaGGGGATCGGCTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: LWDVGWAQSPQEPSPTGEGSAGT*GIGFPT
Trigger: GGTGGGAAAGCCGATCCCCCAAGTGCCTGCAGAGCC...CTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CCTGCCCACTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAAAGGTGTCACCAGGGCTaGTTCCTGAGGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PAHCGMWDGPRAHKNLLQRCHQG*FLRPLP
Trigger: GGGCAGAGGCCTCAGGAACCAGCCCTGGTGACACCT...TTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CAA 72 bp CAAGCCCAGCTCACGGTGTGGAAAAATGAACGCACCTaGTGGTACGGCCTCAAGGAACGGGGGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: QAQLTVWKNERT*WYGLKERGPGR
Trigger: CCGGCCAGGCCCCCGTTCCTTGAGGCCGTACCACAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR TCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAATAGCCTGTGTGGTTTaGAAACTGGACAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPIACVV*KLDRVH
Trigger: GTGAACTCTGTCCAGTTTTCAAACCACACAGGCTAT...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR TCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGGTCTCCACTTGGCAGTaGGGGTATTTCCAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPVSTWQ*GYFQLN
Trigger: GTTTAACTGGAAATACCCTCACTGCCAAGTGGAGAC...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCGGCAGGAGAACCACTTaGACCCAGGAAGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSGRRTT*TQEAEF
Trigger: AAACTCCGCTTCCTGGGTTCAAGTGGTTCTCCTGCC...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCCACGCGGAGCCAGCTaGGGACTCACGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLPRGAS*GLTSML
Trigger: GAGCATGGACGTGAGTCCTCAGCTGGCTCCGCGTGG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTCCTGCCCACTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAGGTCAAGGCTGCAGTaGGCTGGTTGCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LLPTVGCGMGPEPTRTFSRSRLQ*AGCATS
Trigger: TGAAGTGGCGCAACCAGCTCACTGCAGCCTTGACCT...GGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp CCAGCCGGCCAGGGAGTCTGGCCCGGCCTGGCCCCTCGCTGGTGTCCGTCGGCACATTCCATTTACAGATaGAAAAGCACAGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: PAGQGVWPGLAPRWCPSAHSIYR*KSTGKQ
Trigger: TTGTTTGCCTGTGCTTTTTCATCTGTAAATGGAATG...TGCCGACGGACACCAGCGAGGGGCCAGGCCGGGCCAGACTCCCTGGCCGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCTCGGGGCCCATAGAGTaGAGCATGTCCATCACCCGC +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPSGPIE*SMSITR
Trigger: GCGGGTGATGGACATGCTGCACTCTATGGGCCCCGA...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGATGTCCCTTTTGCTCTaGACCATCCGCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAMSLLL*TIRSSS
Trigger: GCTGGAGCTGCGGATGGTGCAGAGCAAAAGGGACAT...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACCTCGATGTCCCTTTTaGTCTGCACCATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRPRCPF*SAPSAA
Trigger: AGCTGCGGATGGTGCAGAGCAAAAGGGACATCGAGG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAGAGACACCAACGCGCTaGGTGTCACGGGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKETPTR*VSRASG
Trigger: GCCGCTTGCCCGTGACACGCAGCGCGTTGGTGTCTC...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAATGAAGACCAGCAGATaGCGGACACTCATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPMKTSR*RTLMKE
Trigger: TTCTTTCATGAGTGTCCGGCATCTGCTGGTCTTCAT...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTCTGGAGCTTCAAAGCTaGTCTTGGCCCAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSLELQS*SWPSTD
Trigger: GTCTGTGCTGGGCCAAGAGCAGCTTTGAAGCTCCAG...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGCAGTGCTCAGCCTGCTaGACCACGGATGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSQCSAC*TTDEGS
Trigger: GCTCCCCTCATCCGTGGTGCAGCAGGCTGAGCACTG...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGTCCAGGGTGGCCTCTTaGCCCTGGGCATTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSSRVAS*PWAFGG
Trigger: CCCACCAAATGCCCAGGGGCAAGAGGCCACCCTGGA...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGATGCCCGCCCCCACCGTaGCCCACACCCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRCPPPP*PTPTLE
Trigger: TTCCAAGGTGGGTGTGGGGCACGGTGGGGGCGGGCA...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAACTTGTCAGAGCTGGTaGTGTGGCCTCTGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRTCQSW*CGLCRH
Trigger: GTGACGGCAGAGGCCACAGCACCAGCTCTGACAAGT...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGGCCCGTAACACCCACTaGAGGGGCAGAAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSARNTH*RGRRSP
Trigger: GGGACTCCTTCTGCCCCTGCAGTGGGTGTTACGGGC...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGGCCACCAGGGGCCTCTaGCGAAGTCAGGAGAGACGA +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKATRGL*RSQERR
Trigger: TCGTCTCTCCTGACTTCGGCAGAGGCCCCTGGTGGC...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGCCCTCCCAGGGCCTTaGACCGTGCACCTACTGTGG +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLALPGP*TVHLLW
Trigger: CCACAGTAGGTGCACGGTGCAAGGCCCTGGGAGGGC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGCATAAACATGGACACTaGTGCCCCGACACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAHKHGH*CPDTGG
Trigger: GCCACCTGTGTCGGGGCAGCAGTGTCCATGTTTATG...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCATGTCTGCACATAACCTaGTCTGCTCACTCACAAACT +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPCLHIT*SAHSQT
Trigger: AGTTTGTGAGTGAGCAGAGCAGGTTATGTGCAGACA...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACCGACAGGCCCAGCTCTaGCCAGGGCTACAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDRQAQL*PGLQGH
Trigger: ATGGCCCTGTAGCCCTGGGCAGAGCTGGGCCTGTCG...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACGACAGGCCCAGCTCTaGCCAGGGCTACAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWERQAQL*PGLQGH
Trigger: ATGGCCCTGTAGCCCTGGGCAGAGCTGGGCCTGTCG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCACAGGTTCTCCCAGCTaGTCGACACGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVTGSPS*STRCGM
Trigger: CATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGT...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAGAACGTCAGCACCTCTaGCTCCCATCACCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRERQHL*LPSPRR
Trigger: CCTTCTTGGTGATGGGAGGCAGAGGTGCTGACGTTC...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGACACGGAGGCGACAGGTaGTTTGATGCCTCCGAAGAG +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRHGGDR*FDASEE
Trigger: CTCTTCGGAGGCATCAAAGCACCTGTCGCCTCCGTG...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGCCCACTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAAATCCCAGGCAGAAGCTaGCCACGTGACCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: PAHCGMWDGPRAHKNLLQIPGRS*PRDHPS
Trigger: ACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGAT...TTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp CATAACAGCCATGAGGAAGGGGAGACGTCCAGCACTTGGCCGGGTCTCAGACACCCTCTGCCCTGGGCTTaGAGACGGCATTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: HNSHEEGETSSTWPGLRHPLPWA*RRHCLP
Trigger: AGGGAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGG...GTGTCTGAGACCCGGCCAAGTGCTGGACGTCTCCCCTTCCTCATGGCTGTTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GCAGAAGCTGCCCACGTGACCACCCCAGTAACAACCCTGGGCAGGAGGTGGGCGGTGAAAGGGAGGCAGTaGGTCACAGGCGTAATCTAC +
Preference number: 4 (lower is better)
Translates to: AEAAHVTTPVTTLGRRWAVKGRQ*VTGVIY
Trigger: GTAGATTACGCCTGTGACGCACTGCCTCCCTTTCAC...CGCCCACCTCCTGCCCAGGGTTGTTACTGGGGTGGTCACGTGGGCAGCTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCTGGAAGATGCCGATaGGTTACAAGAGGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVPGRCR*VTRGPA
Trigger: CGCGGGACCTCTTGTAACCCATCGGCATCTTCCAGG...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGACCCACCTTGGAAGATTaGCAGCTTCCAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRPTLED*QLPGWP
Trigger: AGGCCACCCTGGAAGCTGCCAATCTTCCAAGGTGGG...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGTCAGAGCTGGTGCTGTaGCCTCTGCCGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKSELVL*PLPSPQ
Trigger: CTGGGGTGACGGCAGAGGCCACAGCACCAGCTCTGA...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCAGGGCTGCAGGGGTGTaGCTGAAATCAAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPRAAGV*LKSRQA
Trigger: GGCCTGCCTTGATTTCAGCCACACCCCTGCAGCCCT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGACAGCCGTGGGTTCCCTaGAGACACAAACCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRQPWVP*RHKPLH
Trigger: GTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTG...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGCCCTGTAGGGACCAGTaGCTCTGGGCTGCAACGGGC +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKPCRDQ*LWAATG
Trigger: GCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGG...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCTGGTGGCTGGCAATGTaGCACACGCCCCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPWWLAM*HTPQSP
Trigger: TGGAGACTGGGGCGTGTGCCACATTGCCAGCCACCA...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCGCTCCAGCTGCTCCGTaGTTTGACAGCAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVAPAAP*FDSRQS
Trigger: AGACTGCCTGCTGTCAAACCACGGAGCAGCTGGAGC...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCGGTGGAAACGGGCCGTaGACAGGGCAGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRGGNGP*TGQAPA
Trigger: AGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACC...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTACGAACATGCCCGGGTaGAAACGGGCCGTGGACAGG +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSTNMPG*KRAVDR
Trigger: CCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAACATCTGAGTGCTCGGTaGACGGACACGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKHLSAR*TDTGAA
Trigger: GGCGGCTCCCGTGTCCGTCCACCGAGCACTCAGATG...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGTCCGGGCAGTGGACTTaGCCTCCCACAGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKSGQWT*PPTATL
Trigger: GAGGGTGGCTGTGGGAGGCCAAGTCCACTGCCCGGA...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAGGCGGCAACCCCTGCTaGCAGAGGCAGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRGGNPC*QRQEVC
Trigger: GCACACCTCCTGCCTCTGCCAGCAGGGGTTGCCGCC...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCGGCGGCAACCCCTGCTaGCAGAGGCAGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LKEPRIKACSPGHTARNTGGNPC*QRQEVC
Trigger: GCACACCTCCTGCCTCTGCCAGCAGGGGTTGCCGCC...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAGCCCTGGCTCTGGTCTaGCGGCAACCCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRALALV*RQPLLA
Trigger: TGCCAGCAGGGGTTGCCGCCAGACCAGAGCCAGGGC...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAACCTGGCCCTGGCTCTaGTCTGGCGGCAACCCCTGC +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRTWPWL*SGGNPC
Trigger: GCAGGGGTTGCCGCCAGACCAGAGCCAGGGCCAGGT...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCGACCGTGCACCCTGGTaGGTGATGGGATGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPDRAPW*VMGCPG
Trigger: GCCCGGGCATCCCATCACCCACCAGGGTGCACGGTC...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTAGAGACCGTGCACCCTaGTGGGTGATGGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSRDRAP*WVMGCP
Trigger: CGGGCATCCCATCACCCACCAGGGTGCACGGTCTCT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAGGACATCTCTTGCTCTaGGACAGGGTCCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRGHLLL*DRVLLG
Trigger: GCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCC...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCGATGCATGGGGTGAGTaGCCCTGTGGCACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPDAWGE*PCGTGR
Trigger: CCTTCCAGTGCCACAGGGCCACTCACCCCATGCATC...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAACCTTCACGGAGATGCTaGCTTCGCAGGCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKPSRRC*LRRPVG
Trigger: GCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGG...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCCCAGGGGCTGGGTCTTaGGTTAGAAAGTCACTCGAG +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSPGAGS*VRKSLE
Trigger: CTCGAGTGACTTTCTAACCCAAGACCCAGCCCCTGG...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACTGCTCGACACGCTGTaGGATGTACTGGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRLLDTL*DVLEGS
Trigger: AGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCATCTCTGTACAGCAGTaGCTCCCTCCCAGGCACCAC +
Preference number: 4 (lower is better)
Translates to: WDVGWAQSPQEPSPTGEGISVQQ*LPPRHH
Trigger: GTGGTGCCTGGGAGGGAGCCACTGCTGTACAGAGAT...GCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp GCCCTGGGCTTGCAGACGGCATTGCCTCCCTGTTTCCTCATGGGGCTGTCCCTCCAGCCACTCGGGAGGTaGAGGCAGAAAGATTGCTTC +
Preference number: 4 (lower is better)
Translates to: ALGLQTALPPCFLMGLSLQPLGR*RQKDCF
Trigger: GAAGCAATCTTTCTGCCTCCACCTCCCGAGTGGCTG...GAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CATAACAGCCATGAGGAAGGGGAGACGTCCAGCACTTGGCCGGGTCTCAGACACTCCCTGCCGGGAGTCTaGCTTTGTGGCCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: HNSHEEGETSSTWPGLRHSLPGV*LCGPSQ
Trigger: CTGGGATGGGCCACAAAGCCAGACTCCCGGCAGGGA...GTGTCTGAGACCCGGCCAAGTGCTGGACGTCTCCCCTTCCTCATGGCTGTTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCGGCCACTGGGAATACTaGCCACAAGGTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSNSPTVLGTGVQGPGVTGHWEY*PQGGGS
Trigger: AGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCC...GGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTTGGCACGTTTCACAATaGAGACCAGCAGATGCCGGA +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSWHVSQ*RPADAG
Trigger: TCCGGCATCTGCTGGTCTTCATTGTGAAACGTGCCA...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGAACCCTCCCATACGGTaGAACAACAGCCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRNPPIR*NNSLRS
Trigger: AGATCTTAGGCTGTTGTTTCACCGTATGGGAGGGTT...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACGCCTGGGAAGGTCCCTaGTGCTGCACCGTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDAWEGP*CCTVCL
Trigger: GAGACACACGGTGCAGCATCAGGGACCTTCCCAGGC...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACTGCAGGGGTGTGGCTaGAATCAAGGCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWELQGCG*NQGRPG
Trigger: CCCTGGCCTGCCTTGATTTCAGCCACACCCCTGCAG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAAAGGAGTCCCACACCTaGCACTGCGTTCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRKESHT*HCVLML
Trigger: CAGCATGAGAACGCAGTGTCAGGTGTGGGACTCCTT...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTTGGGGACTCAGCCTCTaGAACGAGCTCAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSWGLSL*NELKEP
Trigger: TGGTTCTTTGAGCTCGTTTCAGAGGCTGAGTCCCCA...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGATCTGCCCGTAGAGGCTaGCAATTTCCACAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRSARRG*QFPQKP
Trigger: GGGCTTTTGTGGAAATTGTCAGCCTCTACGGGCAGA...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTAGCTGCTCCGTGGTTTaGCAGCAGGCAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSSCSVV*QQAVWG
Trigger: TCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGGGTTACCTTCCTGGATaGGAAACTGAAACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRGYLPG*ETETEG
Trigger: GCCTTCAGTTTCAGTTTCTCATCCAGGAAGGTAACC...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGATGTGAAGGAGGCCCATaGGACCAGGCAGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRCEGGP*DQAGGR
Trigger: CCTGCCGCCTGCCTGGTCTCATGGGCCTCCTTCACA...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAGCTGGAGTCAGAAACTaGGGTGCTGTCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPAGVRN*GAVYKN
Trigger: ATTTTTATAGACAGCACCTCAGTTTCTGACTCCAGC...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGGGCTTCAGAGCCGCTaGCCCAGCTTGCAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSGLQSR*PSLQLK
Trigger: TTTGAGCTGCAAGCTGGGTCAGCGGCTCTGAAGCCC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGGGGCTTCAGAGCCGCTaGCCCAGCTTGCAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKGLQSR*PSLQLK
Trigger: TTTGAGCTGCAAGCTGGGTCAGCGGCTCTGAAGCCC...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCAACCCGTCCACCCGCTaGCCTCCAGCTCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVNPSTR*PPAPQA
Trigger: AGCCTGCGGAGCTGGAGGTCAGCGGGTGGACGGGTT...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCACCAGCCTGGGGTTCTaGTGCTTCAGCTCCTGCACA +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPTSLGF*CFSSCT
Trigger: TGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCTGGT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR GCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACACTGGATGGTCCTCTaGAGAACGTGGTGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRHWMVL*RTWCKV
Trigger: TACCTTGCACCACGTTCTGCAGAGGACCATCCAGTG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAAACCAAAAGTTCGAATaGGGGAACAAAGAGGCTATG +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPNQKFE*GNKEAM
Trigger: CATAGCCTCTTTGTTCCCGCATTCGAACTTTTGGTT...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCCAGTGCTCAGCCTGCTaGACCACGGATGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRQCSAC*TTDEGS
Trigger: GCTCCCCTCATCCGTGGTGCAGCAGGCTGAGCACTG...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGTGGCAAACGCGCAGTaGTCAGCCTGCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEVANAQ*SACCTT
Trigger: CGTGGTGCAGCAGGCTGAGCACTGCGCGTTTGCCAC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCTGCTGTGGCTCAATGTaGTGTCACGGGCAGCACGTG +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPCCGSM*CHGQHV
Trigger: CACGTGCTGCCCGTGACAGCACATTGAGCCACAGCA...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGCCCGTAACACCCACTaGAGGGGCAGAAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEARNTH*RGRRSP
Trigger: GGGACTCCTTCTGCCCCTGCAGTGGGTGTTACGGGC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGAGAGAAGTTTCAGATTaGGCCAGAGAGCTCAGGATT +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPREVSD*ARELRI
Trigger: AATCCTGAGCTCTCTGGCGCAATCTGAAACTTCTCT...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGAGTCTGGGGAGGGGATaGCGGACTCTGCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKSLGRG*RTLPVE
Trigger: CTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAGCCCTCCCAGGGCCTTaGACCGTGCACCTACTGTGG +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRALPGP*TVHLLW
Trigger: CCACAGTAGGTGCACGGTGCAAGGCCCTGGGAGGGC...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAAAACTCCAGTTCCCCTaGTCTGGGCCCAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKKLQFP*SGPRQA
Trigger: CGCCTGCCTGGGCCCAGAGCAGGGGAACTGGAGTTT...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAAGGTATCCTCCCCTGTaGTGGGAGTCCGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKRYPPL*WESGVG
Trigger: CCCCACTCCGGACTCCCAGCACAGGGGAGGATACCT...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTAGGTATCCTCCCCTGTaGTGGGAGTCCGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLRYPPL*WESGVG
Trigger: CCCCACTCCGGACTCCCAGCACAGGGGAGGATACCT...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGGCCAGCACCTGCACCTaGCAGGCAGGAACACACGAC +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKASTCT*QAGTHD
Trigger: GTCGTGTGTTCCTGCCTGGCAGGTGCAGGTGCTGGC...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGCCGAGATCACACCACTaGACGCCAGCCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSPRSHH*TPAWVS
Trigger: TGACACCCAGGCTGGCGTGCAGTGGTGTGATCTCGG...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCGAGATCACACCACTaGACGCCAGCCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSPRSHH*TPAWVS
Trigger: TGACACCCAGGCTGGCGTGCAGTGGTGTGATCTCGG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACAGCAGGAGAGACCGTaGACCCTGGTGGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEQQERP*TLVGDG
Trigger: CCCATCACCCACCAGGGTGCACGGTCTCTCCTGCTG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACCACCTTCACGGAGATaGTGGCTTCGCAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEPPSRR*WLRRPV
Trigger: CACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCCACGGAGGCGACAGGTaGTTTGATGCCTCCGAAGAG +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPHGGDR*FDASEE
Trigger: CTCTTCGGAGGCATCAAAGCACCTGTCGCCTCCGTG...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCATGCAGCCTACACAGTaGTGTAGGACCGAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVMQPTQ*CRTEAH
Trigger: GTGAGCCTCGGTCCTACAGCACTGTGTAGGCTGCAT...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTATCGAAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGGAAGCCAGCGCTCTGTaGCGGACCATGCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PIETEGMVLHLLVASCPLEASAL*RTMPLE
Trigger: TTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTC...CAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR GCA 90 bp CATAACAGCCATGAGGAAGGGGAGACGTCCAGCACTTGGCCGGGTCTCAGACACCCAGGAGGTCAAGGCTaGAGTGAGCTGGTTGCGCCA +
Preference number: 4 (lower is better)
Translates to: HNSHEEGETSSTWPGLRHPGGQG*SELVAP
Trigger: TGGCGCAACCAGCTCACTGCAGCCTTGACCTCCTGG...GTGTCTGAGACCCGGCCAAGTGCTGGACGTCTCCCCTTCCTCATGGCTGTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GCAGATATTCAGGGCGAAACAGTGAAAGGGAGGCAGTGCGTCACAGGCGTAATCGCGCCAGGTGGGCTCTaGAGGCACTTGGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: ADIQGETVKGRQCVTGVIAPGGL*RHLGDR
Trigger: CCGATCCCCCAAGTGCCTGCAGAGCCCACCTGGCGC...GATTACGCCTGTGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAATATCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp TACAGGGTGCCATCGGGAAGGACTGCAGCCAGGCGGCTCCAATTCTCCTACTGTTGTGTTCACACCAGCTaGCCCTTCCCTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: YRVPSGRTAARRLQFSYCCVHTS*PFPAAG
Trigger: CCCTGCTGCAGGGAAGGGGCAGCTGGTGTGAACACA...ACAGTAGGAGAATTGGAGCCGCCTGGCTGCAGTCCTTCCCGATGGCACCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp CATAACAGCCATGAGGAAGGGGAGACGTCCAGCACTTGGCCGGGTCTCAGACACTGTGTTCACACCAGCTaGCCCTTCCCTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HNSHEEGETSSTWPGLRHCVHTS*PFPAAG
Trigger: CCCTGCTGCAGGGAAGGGGCAGCTGGTGTGAACACA...GTGTCTGAGACCCGGCCAAGTGCTGGACGTCTCCCCTTCCTCATGGCTGTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GCTTCCTATCGAAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCCTCTTGGTGGCCTCCTaGCCACTGTGGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: ASYRNRGHGLAPLGGLLPLLVAS*PLWDVG
Trigger: TCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAG...GGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGATAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp CTTCTTACAAGGACACCAAGCAGCTTGGATCAGGGCCCACCCAGAGCCCTGATGCCTCTGCCCTGGGCTTaGAGACGGCATTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLTRTPSSLDQGPPRALMPLPWA*RRHCLP
Trigger: AGGGAGGCAATGCCGTCTGCAAGCCCAGGGCAGAGG...CATCAGGGCTCTGGGTGGGCCCTGATCCAAGCTGCTTGGTGTCCTTGTAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GCCCTGGGCTTGCAGACGGCATTGCCTCCCTGTTTCCTCATGGGGCTGTCCCTCGTGAAAGGGAGGCAGTaGGTCACAGGCGTAATCTAC +
Preference number: 4 (lower is better)
Translates to: ALGLQTALPPCFLMGLSLVKGRQ*VTGVIY
Trigger: GTAGATTACGCCTGTGACGCACTGCCTCCCTTTCAC...GAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCAACTCGGCCTCAAACTaGTTGGGCGTGATAATGTCT +
Preference number: 4 (lower is better)
Translates to: DEHARVETGRGQGRLQLLNSASN*LGVIMS
Trigger: AGACATTATCACGCCCAACCAGTTTGAGGCCGAGTT...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCGCAAGGCTTCCTCCTaGCTGTGGATCTTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSRKASS*LWIFRP
Trigger: TGGCCGGAAGATCCACAGCCAGGAGGAAGCCTTGCG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCACAGCACCGTGGCCTaGACGACGATCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLHSTVA*TTISGS
Trigger: GGACCCAGAGATCGTCGTCCAGGCCACGGTGCTGTG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGCCCTCACAGCACCGTaGCCTGGACGACGATCTCTG +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEALTAP*PGRRSL
Trigger: CAGAGATCGTCGTCCAGGCCACGGTGCTGTGAGGGC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCGGCCCAGGAGCCTTGTaGGGAAGGGAGCCGGGTTTT +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRGPGAL*GREPGF
Trigger: AAAACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCC...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGTCACGGGCAGCACGTaGCAAACGCGCAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLVTGST*QTRSAQ
Trigger: CTGAGCACTGCGCGTTTGCCACGTGCTGCCCGTGAC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACTCAGAGCTGGTGCTGTaGCCTCTGCCGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDSELVL*PLPSPQ
Trigger: CTGGGGTGACGGCAGAGGCCACAGCACCAGCTCTGA...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGGTGGGGGTACCCCTTaGAGAGTCCGCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEGGGTP*RVRFLG
Trigger: CCCCAAGAAGCGGACTCTCCAAGGGGTACCCCCACC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGGGTGGGGGTACCCCTTaGAGAGTCCGCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKGGGTP*RVRFLG
Trigger: CCCCAAGAAGCGGACTCTCCAAGGGGTACCCCCACC...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGGAAAAGCTTTCCTGGTaGCTGGCAATGTGGCACACG +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAEKLSW*LAMWHT
Trigger: CGTGTGCCACATTGCCAGCCACCAGGAAAGCTTTTC...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCGCTCCAGCTGCTCCGTaGTTTGACAGCAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPAPAAP*FDSRQS
Trigger: AGACTGCCTGCTGTCAAACCACGGAGCAGCTGGAGC...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACTTTGGCCTCTTACCTaGTGCAGGCAACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRLWPLT*CRQLSC
Trigger: GCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTAGAGGGAGAGACTCCTaGCTACCCGGGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSRGRDS*LPGQQS
Trigger: ACTCTGCTGCCCGGGTAGCCAGGAGTCTCTCCCTCT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTACCCTCCCCAGGGCCTaGGGTCCTTCTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLATLPRA*GPSGSP
Trigger: GGGGCTCCCAGAAGGACCCCAGGCCCTGGGGAGGGT...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCTATCCTCCCCTGTGCTaGGAGTCCGGAGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRYPPLC*ESGVGT
Trigger: CGTCCCCACTCCGGACTCCCAGCACAGGGGAGGATA...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGCCTTCCACCTGCAGATaGCCAGCACCTGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKPSTCR*PAPAPA
Trigger: GGCAGGTGCAGGTGCTGGCCATCTGCAGGTGGAAGG...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCACTGCACGCCAGCCTaGGTGTCAGAGCGAGACTTC +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSHCTPA*VSERDF
Trigger: GAAGTCTCGCTCTGACACCCAGGCTGGCGTGCAGTG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCCAGGAGGTGTGCGGCTaGAGTCAGAAACTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPQEVCG*SQKLRC
Trigger: GCACCTCAGTTTCTGACTCCAGCCGCACACCTCCTG...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCGCCACGATGCCTGCTaGGTCCTGCAGGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDRHDAC*VLQGQG
Trigger: CCCCTGTCCCTGCAGGACCCAGCAGGCATCGTGGCG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGAGAGACCGTGCACCCTaGTGGGTGATGGGATGCCCG +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKRDRAP*WVMGCP
Trigger: CGGGCATCCCATCACCCACCAGGGTGCACGGTCTCT...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTCCCGCAGTATACTGGTaGATGGGAAGAAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSPAVYW*MGRKER
Trigger: CCTCTCCTTTCTTCCCATCCACCAGTATACTGCGGG...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAAAATGGGTTTCCTGTTaGACAAAGACCAGAAATGGC +
Preference number: 4 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPKWVSC*TKTRNG
Trigger: GCCATTTCTGGTCTTTGTCCAACAGGAAACCCATTT...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGGATGCATGGGGTGAGTaGCCCTGTGGCACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKDAWGE*PCGTGR
Trigger: CCTTCCAGTGCCACAGGGCCACTCACCCCATGCATC...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCAGTACCCAGGTCGTGTaGGGGATCCCCAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPSTQVV*GIPKQK
Trigger: CTTCTGCTTGGGGATCCCCCACACGACCTGGGTACT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTTCTTACAAGGACACCAAGCAGCTTGGATCAGGGCCCACCCAGAGCCCTGATGACCCTGGGCAGGAGGTaGGCGTGCTGGTGCACAACT +
Preference number: 4 (lower is better)
Translates to: LLTRTPSSLDQGPPRALMTLGRR*ACWCTT
Trigger: AGTTGTGCACCAGCACGCCCACCTCCTGCCCAGGGT...CATCAGGGCTCTGGGTGGGCCCTGATCCAAGCTGCTTGGTGTCCTTGTAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCGAGGCCTGCGCCAGGTaGGCTCTGCAGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVEACAR*ALQALG
Trigger: CCCAAGTGCCTGCAGAGCCCACCTGGCGCAGGCCTC...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp TGGCTTTGTGGCCCATCCCAGGCAGAAGCTGCCCACGTGACCACCCCAGTAACAATACTGGCCACAAGGTaGAGGCTCTGCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: WLCGPSQAEAAHVTTPVTILATR*RLCQAQ
Trigger: CTGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTAT...TGTTACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGATGGGCCACAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp GCCCTGGGCTTGCAGACGGCATTGCCTCCCTGTTTCCTCATGGGGCTGTCCCTCTCTCAAAGGGGCCACTaGGAATACTGGCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: ALGLQTALPPCFLMGLSLSQRGH*EYWPQG
Trigger: ACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGA...GAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp TGGCTTTGTGGCCCATCCCAGGCAGAAGCTGCCCACGTGACCACCCCAGTAACATGGTCTTGCACCTCTTaGTGGCCTCCTGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: WLCGPSQAEAAHVTTPVTWSCTS*WPPAHC
Trigger: ACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCA...TGTTACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGATGGGCCACAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp GCTCAGACAGGGAGCTCCAGGAAATCCTCTCAAAGGGGCCACTGGGAATACTGGAGGTGTCACCAGGGCTaGTTCCTGAGGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: AQTGSSRKSSQRGHWEYWRCHQG*FLRPLP
Trigger: GGGCAGAGGCCTCAGGAACCAGCCCTGGTGACACCT...CCAGTATTCCCAGTGGCCCCTTTGAGAGGATTTCCTGGAGCTCCCTGTCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR TCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGTCTGCAGACCGACTTaGATTTGCTGGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSVCRPT*ICWGLG
Trigger: TCCCAGGCCCCAGCAAATTCAAGTCGGTCTGCAGAC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCTGCTGCACCACGGATaGGGGGAGCTTCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLLLHHG*GELPQG
Trigger: TCCTTGTGGAAGCTCCCCTCATCCGTGGTGCAGCAG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCCAGGGAGGTCACTGCTaGGCAGAGGATGATAGGACT +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPQGGHC*AEDDRT
Trigger: AGTCCTATCATCCTCTGCTCAGCAGTGACCTCCCTG...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTCCTGATGCACGCTCGTaGAGACATTCAGAACGAACA +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSPDARS*RHSERT
Trigger: TGTTCGTTCTGAATGTCTTCACGAGCGTGCATCAGG...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGATCTGCCCGTAGAGGCTaGCAATTTCCACAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRSARRG*QFPQKP
Trigger: GGGCTTTTGTGGAAATTGTCAGCCTCTACGGGCAGA...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGATGACGGCTCGAGCTTaGCACAGGTTCTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSMTARA*HRFSQL
Trigger: CAGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCAT...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAATGCCTCCGAAGAGCTaGGCTCCATTCCACGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKMPPKS*APFHGG
Trigger: CCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCAT...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGAGGCGACAGGTGCTTTaGTGCCTCCGAAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKRRQVL*CLRRAE
Trigger: CTCAGCTCTTCGGAGGCATCAAAGCACCTGTCGCCT...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTCCTGCCCACTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCCACGGTGTGGAAAAATaGACGCACCTTGTGGTACGG +
Preference number: 4 (lower is better)
Translates to: LLPTVGCGMGPEPTRTFSHGVEK*THLVVR
Trigger: CCGTACCACAAGGTGCGTTCATTTTTCCACACCGTG...GGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCACCAGGGCTGGTTCCTaGGGCCTCTGCCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVTRAGS*GLCPGL
Trigger: AAGCCCAGGGCAGAGGCCTCAGGAACCAGCCCTGGT...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp ATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTTCAAATCCCAAAACCTaGAGCGGGAACGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: MGPEPTRTFSNRGGRLDLSNPKT*SGNVAA
Trigger: GGCGGCCACGTTCCCGCTGCAGGTTTTGGGATTTGA...AAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398081.5
CDS-3UTR GCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAATCGGGGCCCATAGAGTaGAGCATGTCCATCACCCGC +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKSGPIE*SMSITR
Trigger: GCGGGTGATGGACATGCTGCACTCTATGGGCCCCGA...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCAATCAGGTAGTTGCTaGCCTGCGGGGAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLQSGSC*PAGRAG
Trigger: ACCTGCCCTCCCCGCAGGGCAGCAACTACCTGATTG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACGCACAATCAGGTAGTTaGTGCCCTGCGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDAQSGS*CPAGRA
Trigger: TGCCCTCCCCGCAGGGCAGCAACTACCTGATTGTGC...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAATCCGCAGCTCCAGCTaGATGGGGCTGGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRIRSSS*MGLGLT
Trigger: AGTGAGGCCCAGCCCCATGCAGCTGGAGCTGCGGAT...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCACTCCTTCTCAGAGATaGAAAGACAGAGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSTPSQR*KDRGHP
Trigger: TGGGTGGCCTCTGTCTTTGCATCTCTGAGAAGGAGT...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAACTCCTTCTCAGAGATaGAAAGACAGAGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRTPSQR*KDRGHP
Trigger: TGGGTGGCCTCTGTCTTTGCATCTCTGAGAAGGAGT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACAGCCATCCTCCTTCCTaGTGGTGTGGCGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDSHPPS*WCGGAL
Trigger: CAGGGCGCCGCCACACCAGCAGGAAGGAGGATGGCT...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGCCAAGAATCAAAGCTTaGTCGCCAGGGCACACCGCC +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSPRIKA*SPGHTA
Trigger: GGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGG...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAGCCACCAGGGGCCTCTaGCGAAGTCAGGAGAGACGA +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRATRGL*RSQERR
Trigger: TCGTCTCTCCTGACTTCGGCAGAGGCCCCTGGTGGC...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCGAAAAGAGCTCCAGCTaGCAGAACACTCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSEKSSS*QNTLNL
Trigger: GAGGTTGAGAGTGTTCTGGCAGCTGGAGCTCTTTTC...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGAAACATGGACACTGCTaGCCCGACACAGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKKHGHC*PDTGGP
Trigger: GGGGCCACCTGTGTCGGGGCAGCAGTGTCCATGTTT...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCCCGAGATCACACCACTaGACGCCAGCCTGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRPRSHH*TPAWVS
Trigger: TGACACCCAGGCTGGCGTGCAGTGGTGTGATCTCGG...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACTCTGGCGGCAACCCCTaGTGGCAGAGGCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDSGGNP*WQRQEV
Trigger: CACCTCCTGCCTCTGCCAGCAGGGGTTGCCGCCAGA...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCCCACCTTCACGGAGATaGTGGCTTCGCAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPPPSRR*WLRRPV
Trigger: CACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGG...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCGAGGACTCACGTCCATaGTCCAGAACGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPEDSRP*SRTSAP
Trigger: AGGTGCTGACGTTCTGGAGCATGGACGTGAGTCCTC...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGCTCTGTGCCGGACCATaGCTCTGGAATTGGCATCTC +
Preference number: 4 (lower is better)
Translates to: LWDVGWAQSPQEPSPTGELCAGP*LWNWHL
Trigger: GAGATGCCAATTCCAGAGGCATGGTCCGGCACAGAG...CTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR GCA 90 bp ATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTAGGTGGGCGTGCTGGTaGACAACTATAGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: MGPEPTRTFSNRGGRLDLRWACW*TTIVPA
Trigger: GGCTGGGACTATAGTTGTGCACCAGCACGCCCACCT...AAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp CATAACAGCCATGAGGAAGGGGAGACGTCCAGCACTTGGCCGGGTCTCAGACACAGGTGGGCGTGCTGGTaGACAACTATAGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HNSHEEGETSSTWPGLRHRWACW*TTIVPA
Trigger: GGCTGGGACTATAGTTGTGCACCAGCACGCCCACCT...GTGTCTGAGACCCGGCCAAGTGCTGGACGTCTCCCCTTCCTCATGGCTGTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GCTCCAGGAAATCCTCTCAAAGGGGCCACTGGGAATACTGGCCACAAGGTGGAGGAACACCCGTGTCCCTaGCGGGAGTCTGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: APGNPLKGATGNTGHKVEEHPCP*RESGFV
Trigger: CACAAAGCCAGACTCCCGGCAGGGACACGGGTGTTC...CTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGAGGATTTCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR GCA 90 bp CTTCTTACAAGGACACCAAGCAGCTTGGATCAGGGCCCACCCAGAGCCCTGATGGAACACCCGTGTCCCTaGCGGGAGTCTGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LLTRTPSSLDQGPPRALMEHPCP*RESGFV
Trigger: CACAAAGCCAGACTCCCGGCAGGGACACGGGTGTTC...CATCAGGGCTCTGGGTGGGCCCTGATCCAAGCTGCTTGGTGTCCTTGTAAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GGAGGCTTTCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATGCGCCAGGTGGGCTCTaGAGGCACTTGGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: GGFPPQRPLVAFHNLLSHAPGGL*RHLGDR
Trigger: CCGATCCCCCAAGTGCCTGCAGAGCCCACCTGGCGC...ATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGAAAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCTCCACGCCAGGAGCATaGCAGCAAACAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRSTPGA*QQTGPQ
Trigger: CTGGGGACCTGTTTGCTGCCATGCTCCTGGCGTGGA...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGCCTGGAAGATGCCGATaGGTTACAAGAGGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKPGRCR*VTRGPA
Trigger: CGCGGGACCTCTTGTAACCCATCGGCATCTTCCAGG...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCCTGGGCATTTGGTaGGGCACAGAACTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSPLGIW*GTELRS
Trigger: TGACCTCAGTTCTGTGCCCCACCAAATGCCCAGGGG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCTCAGAGCTGGTGCTGTaGCCTCTGCCGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: LKEPRIKACSPGHTARNTSELVL*PLPSPQ
Trigger: CTGGGGTGACGGCAGAGGCCACAGCACCAGCTCTGA...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCGCCTATAGCTATACCTaGGGGGACCCCAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPAYSYT*GDPKLW
Trigger: CCAGAGTTTGGGGTCCCCCCAGGTATAGCTATAGGC...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCCCTGTAGGGACCAGTaGCTCTGGGCTGCAACGGGC +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDPCRDQ*LWAATG
Trigger: GCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTAGGGCCAGGTGGTTCTaGCAGATCCCTGCACTCACA +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSRARWF*QIPALT
Trigger: TGTGAGTGCAGGGATCTGCCAGAACCACCTGGCCCT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACTGGTGGCTGGCAATGTaGCACACGCCCCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDWWLAM*HTPQSP
Trigger: TGGAGACTGGGGCGTGTGCCACATTGCCAGCCACCA...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACTCCGGGCAGTGGACTTaGCCTCCCACAGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDSGQWT*PPTATL
Trigger: GAGGGTGGCTGTGGGAGGCCAAGTCCACTGCCCGGA...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGCGCTCCAGGCTTCCCTaGCTTAGGGCTGACAAGACT +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSRSRLP*LRADKT
Trigger: AGTCTTGTCAGCCCTAAGCCAGGGAAGCCTGGAGCG...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCACTGCACGCCAGCCTaGGTGTCAGAGCGAGACTTC +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLHCTPA*VSERDF
Trigger: GAAGTCTCGCTCTGACACCCAGGCTGGCGTGCAGTG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAACAGGCCACACAAACTaGCTCCTACCACCTAACAGA +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRTGHTN*LLPPNR
Trigger: TCTGTTAGGTGGTAGGAGCCAGTTTGTGTGGCCTGT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCCCAGCCACGCACTGTaGAGCGTGGCACAGGCCACA +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDPSHAL*SVAQAT
Trigger: TGTGGCCTGTGCCACGCTCCACAGTGCGTGGCTGGG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCGCCACGATGCCTGCTaGGTCCTGCAGGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLARHDAC*VLQGQG
Trigger: CCCCTGTCCCTGCAGGACCCAGCAGGCATCGTGGCG...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCGGCAAGGGTCAGAGATaGAAGGGGACATCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVGKGQR*KGTSLA
Trigger: AGCAAGAGATGTCCCCTTCCATCTCTGACCCTTGCC...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGATATCCCACCAGAAATaGGTTTCCTGTTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPISHQK*VSCWTK
Trigger: CTTTGTCCAACAGGAAACCCATTTCTGGTGGGATAT...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAAGGTCACCACACACCTaGCACCCTCCAAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRRSPHT*HPPRAH
Trigger: GTGGGCCCTTGGAGGGTGCCAGGTGTGTGGTGACCT...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCGTCAGGGAACCAACAACGCAGCTTGTGTGGAACACCCGTGTCCCTGCCGGGAGCCGGACCATGCCTCTaGAATTGGCATCTCTGTACA +
Preference number: 4 (lower is better)
Translates to: ASGNQQRSLCGTPVSLPGAGPCL*NWHLCT
Trigger: TGTACAGAGATGCCAATTCCAGAGGCATGGTCCGGC...TCCCGGCAGGGACACGGGTGTTCCACACAAGCTGCGTTGTTGGTTCCCTGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp AAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGCACATGTCCTTCAGCTaGAAGCCAGCGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KQRAWSCTSWWPPAHCGMHMSFS*KPALCA
Trigger: GGCACAGAGCGCTGGCTTCCAGCTGAAGGACATGTG...CATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp TACAGGGTGCCATCGGGAAGGACTGCAGCCAGGCGGCTCCAATTCTCCTACTGTTCCAGGACGGGAGCCTaGGACCCCAGAGAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: YRVPSGRTAARRLQFSYCSRTGA*DPRERY
Trigger: ATACCTTTCTCTGGGGTCCCAGGCTCCCGTCCTGGA...ACAGTAGGAGAATTGGAGCCGCCTGGCTGCAGTCCTTCCCGATGGCACCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp CCTGCCCACTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACATCGCAAGCTGGTCTaGACGCTTCCAGAGTCTACC +
Preference number: 4 (lower is better)
Translates to: PAHCGMWDGPRAHKNLLQHRKLV*TLPEST
Trigger: GGTAGACTCTGGAAGCGTCCAGACCAGCTTGCGATG...TTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp ATCCCAGGCAGAAGCTGCCCACGTGACCACCCCAGTAACAACCCTGGGCAGGAGAATGAACGCACCTTGTaGTACGGCCTCAAGGAACGG +
Preference number: 4 (lower is better)
Translates to: IPGRSCPRDHPSNNPGQENERTL*YGLKER
Trigger: CCGTTCCTTGAGGCCGTACCACAAGGTGCGTTCATT...CTCCTGCCCAGGGTTGTTACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp GGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCGCCCAGCTCACGGTGTaGAAAAATGAACGCACCTTG +
Preference number: 4 (lower is better)
Translates to: GSNSPTVLGTGVQGPGVTAQLTV*KNERTL
Trigger: CAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGC...GGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CCTATCGAAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGGGCCACTGGGAATACTaGCCACAAGGTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PIETEGMVLHLLVASCPLGHWEY*PQGGGS
Trigger: AGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCC...CAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp AAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGGGCCACTGGGAATACTaGCCACAAGGTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KQRAWSCTSWWPPAHCGMGHWEY*PQGGGS
Trigger: AGAGCCTCCACCTTGTGGCCAGTATTCCCAGTGGCC...CATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTCTGTGGGATGTGGGATaGGCCCAGAGCCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: MGPEPTRTFSNRGGRLDLLWDVG*AQSPQE
Trigger: TTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAG...AAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GTATCTTTAACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCGCCCACTGTGGGATGTaGGATGGGCCCAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: VSLTYRTGAGGSGLNQELAHCGM*DGPRAH
Trigger: GTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGC...GAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGTTAAAGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp AAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGTGGTCTTGCACCTCTTaGTGGCCTCCTGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: KQRAWSCTSWWPPAHCGMWSCTS*WPPAHC
Trigger: ACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCA...CATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CAAGCCCAGCTCACGGTGTGGAAAAATGAACGCACCTTGTGGTACGGCCTCAAGCTGAGGCCTCTGCCCTaGGCTTGCAGACGGCATTGC +
Preference number: 4 (lower is better)
Translates to: QAQLTVWKNERTLWYGLKLRPLP*ACRRHC
Trigger: GCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAG...CTTGAGGCCGTACCACAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR TCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGTGGCAGAATTCTTCCTaGCCCCAACCGTTACCACCC +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKWQNSS*PQPLPP
Trigger: GGGTGGTAACGGTTGGGGTCAGGAAGAATTCTGCCA...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCCTTCCACAAGGAACCTaGCGGGGTGGTTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRLPQGT*RGGSLE
Trigger: CTCCAGAGAACCACCCCGTCAGGTTCCTTGTGGAAG...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCTGGGGACTCAGCCTCTaGAACGAGCTCAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPWGLSL*NELKEP
Trigger: TGGTTCTTTGAGCTCGTTTCAGAGGCTGAGTCCCCA...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCAGGCACGAGAGGCCTaGGCTCAACCACATAGCTTT +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSQAREA*AQPHSF
Trigger: AAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGGGCTCTGCCTTCTCTaGCACCAGGCACGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAGLCLL*HQAREA
Trigger: GGCCTCTCGTGCCTGGTGTCAGAGAAGGCAGAGCCC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGGCAGGAGAACCACTTaGACCCAGGAAGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSGRRTT*TQEAEF
Trigger: AAACTCCGCTTCCTGGGTTCAAGTGGTTCTCCTGCC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGATGACGGCTCGAGCTTaGCACAGGTTCTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKMTARA*HRFSQL
Trigger: CAGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCAT...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGAGGCGACAGGTGCTTTaGTGCCTCCGAAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKRRQVL*CLRRAE
Trigger: CTCAGCTCTTCGGAGGCATCAAAGCACCTGTCGCCT...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GCAGAAGTGCGAGCAGCAGCCTCGAGGCGGCGAGGCCTGCGCCAGGTGGGCTCTCATTCCATTTACAGATaGAAAAGCACAGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: AEVRAAASRRRGLRQVGSHSIYR*KSTGKQ
Trigger: TTGTTTGCCTGTGCTTTTTCATCTGTAAATGGAATG...AGAGCCCACCTGGCGCAGGCCTCGCCGCCTCGAGGCTGCTGCTCGCACTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR TCA 90 bp GCCCTGGGCTTGCAGACGGCATTGCCTCCCTGTTTCCTCATGGGGCTGTCCCTCCTGAGCATGCGAACATaGTGGCAATTAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ALGLQTALPPCFLMGLSLLSMRT*WQLGGF
Trigger: AAAGCCTCCTAATTGCCATCATGTTCGCATGCTCAG...GAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp TGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGTGGGATGGGCCCCTGAGCATGCGAACATaGTGGCAATTAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: WSCTSWWPPAHCGMWDGPLSMRT*WQLGGF
Trigger: AAAGCCTCCTAATTGCCATCATGTTCGCATGCTCAG...GGGCCCATCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp GCTTCCTATCGAAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCTTCAGGGCGAAACAGTaGAAGGGAGGCAGTGCGTCA +
Preference number: 4 (lower is better)
Translates to: ASYRNRGHGLAPLGGLLPFRAKQ*KGGSAS
Trigger: TGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAA...GGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGATAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGACCGGCTCCCCTCGGCTaGGACTCTGGCTCTGGCGCG +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRPAPLG*DSGSGA
Trigger: CGCGCCAGAGCCAGAGTCGCAGCCGAGGGGAGCCGG...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCTGCTGCTTCAGCTCCTaGACAATGTCCACCACCATG +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPCCFSS*TMSTTM
Trigger: CATGGTGGTGGACATTGTGCAGGAGCTGAAGCAGCA...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGAGCCTGGGGTTCTGCTaGTTCAGCTCCTGCACAATG +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSSLGFC*FSSCTM
Trigger: CATTGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCT...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR GCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAACAAACAGGTCCCCAGTaGCCACAAAGACGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKQTGPQ*PQRRRP
Trigger: TGGACGCCGTCTTTGTGGGCACTGGGGACCTGTTTG...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGCTGGAGCTTCAAAGCTaGTCTTGGCCCAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSLELQS*SWPSTD
Trigger: GTCTGTGCTGGGCCAAGAGCAGCTTTGAAGCTCCAG...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAACTTGTCAGAGCTGGTaGTGTGGCCTCTGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKTCQSW*CGLCRH
Trigger: GTGACGGCAGAGGCCACAGCACCAGCTCTGACAAGT...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGAGGTTCTTTCCCCCATaGTATACGTGCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWARFFPP*YTCSWC
Trigger: ACACCAAGAGCACGTATAGCATGGGGGAAAGAACCT...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCAGGTTCTTTCCCCCATaGTATACGTGCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSRFFPP*YTCSWC
Trigger: ACACCAAGAGCACGTATAGCATGGGGGAAAGAACCT...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAGACACTGCGTTCTCATaGTGGGTTTTTCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRDTAFS*WVFHQL
Trigger: GAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTC...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAATTTACGGGAGGCGCCTaGAGGGACAGCCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKFTGGA*RDSHSP
Trigger: AGGAGAATGGCTGTCCCTGCAGGCGCCTCCCGTAAA...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACAGTCTGGGGAGGGGATaGCGGACTCTGCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDSLGRG*RTLPVE
Trigger: CTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCAGGGCCTTGCACCGTaGACCTACTGTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDQGLAP*TYCGLC
Trigger: GCAGAGCCCACAGTAGGTGCACGGTGCAAGGCCCTG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACTGGTGGGTGATGGGATaGCCGGGCAGTGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDWWVMG*PGSGLD
Trigger: GTCCAAGCCACTGCCCGGGCATCCCATCACCCACCA...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGAAGGGGACATCTCTTaGTCTGGGACAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEEGDIS*SGTGSC
Trigger: GCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTTC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGCTGGCATTTGGGGGTaGTGTTCCCACCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEAGIWG*CSHHSL
Trigger: AAGGCTGTGGTGGGAACAGCACCCCCAAATGCCAGC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAACAGGTTCTCCCAGCTaGTCGACACGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKTGSPS*STRCGM
Trigger: CATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGT...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GTATCTTTAACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCGTGCGCCCCGTCTCCTaGCGAGAGAGAAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: VSLTYRTGAGGSGLNQELVRPVS*RERKPV
Trigger: GACTGGCTTTCTCTCTCGGCAGGAGACGGGGCGCAC...GAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGTTAAAGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR GCA 90 bp CAAGCCCAGCTCACGGTGTGGAAAAATGAACGCACCTTGTGGTACGGCCTCAAGCTCTTGGTGGCCTCCTaGCCACTGTGGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: QAQLTVWKNERTLWYGLKLLVAS*PLWDVG
Trigger: TCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAG...CTTGAGGCCGTACCACAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR GCA 90 bp GCTCCAGGAAATCCTCTCAAAGGGGCCACTGGGAATACTGGCCACAAGGTGGAGCAGAGGGCATGGTCTTaGACCTCTTGGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: APGNPLKGATGNTGHKVEQRAWS*TSWWPP
Trigger: AGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTG...CTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGAGGATTTCCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR GCA 90 bp CTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGTGAAAGGGAGGCAGTaGGTCACAGGCGTAATCTAC +
Preference number: 4 (lower is better)
Translates to: LWDVGWAQSPQEPSPTGEVKGRQ*VTGVIY
Trigger: GTAGATTACGCCTGTGACGCACTGCCTCCCTTTCAC...CTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTACTCCTTCCCCGGCCTaGGCTTTTGCACACTGGATG +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLTPSPA*AFAHWM
Trigger: CATCCAGTGTGCAAAAGCCCAGGCCGGGGAAGGAGT...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACGGCCCAGGAGCCTTGTaGGGAAGGGAGCCGGGTTTT +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDGPGAL*GREPGF
Trigger: AAAACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCC...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGCCCCTGGGCATTTGGTaGGGCACAGAACTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKPLGIW*GTELRS
Trigger: TGACCTCAGTTCTGTGCCCCACCAAATGCCCAGGGG...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACCCACCTTGGAAGATTaGCAGCTTCCAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEPTLED*QLPGWP
Trigger: AGGCCACCCTGGAAGCTGCCAATCTTCCAAGGTGGG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAAGGACTTGTCAGAGCTaGTGCTGTGGCCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWERTCQS*CCGLCR
Trigger: ACGGCAGAGGCCACAGCACCAGCTCTGACAAGTCCT...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCAGGACTTGTCAGAGCTaGTGCTGTGGCCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRRTCQS*CCGLCR
Trigger: ACGGCAGAGGCCACAGCACCAGCTCTGACAAGTCCT...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGCCTATAGCTATACCTaGGGGGACCCCAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSAYSYT*GDPKLW
Trigger: CCAGAGTTTGGGGTCCCCCCAGGTATAGCTATAGGC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCAGGGCTGCAGGGGTGTaGCTGAAATCAAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LKEPRIKACSPGHTARNTRAAGV*LKSRQA
Trigger: GGCCTGCCTTGATTTCAGCCACACCCCTGCAGCCCT...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTTGCACACCCCAGAGCTaGGATGCAGGGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLACTPQS*DAGLQG
Trigger: CCCCTGCAGCCCTGCATCCCAGCTCTGGGGTGTGCA...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACGGAGCCAGGAAACATaGCTGCGAAACCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWERSQET*LRNPCL
Trigger: CAGACACGGGTTTCGCAGCCATGTTTCCTGGCTCCG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTAAAGAAAAGCTTTCCTaGTGGCTGGCAATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSKEKLS*WLAMWH
Trigger: GTGCCACATTGCCAGCCACCAGGAAAGCTTTTCTTT...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCAAAGAAAAGCTTTCCTaGTGGCTGGCAATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSKEKLS*WLAMWH
Trigger: GTGCCACATTGCCAGCCACCAGGAAAGCTTTTCTTT...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTACTGCGTTCTCATGCTaGGTTTTTCACCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSTAFSC*VFHQLT
Trigger: TGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGT...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCCTTTGGCCTCTTACCTaGTGCAGGCAACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPLWPLT*CRQLSC
Trigger: GCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAG...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCTTACCCCAGGGGCTTTaGCCTCTTACCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRLPQGL*PLTWCR
Trigger: CCTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAA...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAATTACCCCAGGGGCTTTaGCCTCTTACCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWELPQGL*PLTWCR
Trigger: CCTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAA...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCGCTCCAGGCTTCCCTaGCTTAGGGCTGACAAGACT +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLRSRLP*LRADKT
Trigger: AGTCTTGTCAGCCCTAAGCCAGGGAAGCCTGGAGCG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGCTGGGAGTCCGGAGTaGGGACGGTGTCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAAGSPE*GRCPPR
Trigger: TCTGGGTGGACACCGTCCCCACTCCGGACTCCCAGC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTAGTCCCCTAGAAGGATaGCTCACGTCCATCCTACCG +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSSPLEG*LTSILP
Trigger: CGGTAGGATGGACGTGAGCCATCCTTCTAGGGGACT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAACGCACTGTGGAGCGTaGCACAGGCCACACAAACTG +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWETHCGA*HRPHKL
Trigger: CAGTTTGTGTGGCCTGTGCCACGCTCCACAGTGCGT...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGGGACATCTCTTGCTCTaGGACAGGGTCCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKGHLLL*DRVLLG
Trigger: GCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCC...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGACAGGACAGAGATGCATaGGGTGAGTGGCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRQDRDA*GEWPCG
Trigger: GCCACAGGGCCACTCACCCCATGCATCTCTGTCCTG...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACGCTGTGGGATGTACTaGAAGGGTCTTCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWERCGMY*KGLPGL
Trigger: CAGGCCTGGAAGACCCTTCCAGTACATCCCACAGCG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGGCTTCAGACACCTCATaGGGACCTATGACGGCTCGA +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKASDTS*GPMTAR
Trigger: TCGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGC...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTGCCCACTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAAGGCTACACTCTGCCCTaGGGGGTCAAAATAATCCCA +
Preference number: 4 (lower is better)
Translates to: PAHCGMWDGPRAHKNLLQGYTLP*GVKIIP
Trigger: TGGGATTATTTTGACCCCCCAGGGCAGAGTGTAGCC...TTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp CAAGCCCAGCTCACGGTGTGGAAAAATGAACGCACCTTGTGGTACGGCCTCAAGGCTGAGCCCCTGGGCTaGCATCTCCGTTTCACACAC +
Preference number: 4 (lower is better)
Translates to: QAQLTVWKNERTLWYGLKAEPLG*HLRFTH
Trigger: GTGTGTGAAACGGAGATGCCAGCCCAGGGGCTCAGC...CTTGAGGCCGTACCACAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp CAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCTCCCTGCCGGGAGTCTaGCTTTGTGGCCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: QEPSPTGEGAWILCPTHSSLPGV*LCGPSQ
Trigger: CTGGGATGGGCCACAAAGCCAGACTCCCGGCAGGGA...GGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GCAGATATTCAGGGCGAAACAGTGAAAGGGAGGCAGTGCGTCACAGGCGTAATCGCGGCCCAAGGAGCCTaGCACTCCTGTCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: ADIQGETVKGRQCVTGVIAAQGA*HSCQIP
Trigger: TGGGATCTGACAGGAGTGCCAGGCTCCTTGGGCCGC...GATTACGCCTGTGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAATATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCGCGGCCCAAGGAGCCTaGCACTCCTGTCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: QEPSPTGEGAWILCPTHSAAQGA*HSCQIP
Trigger: TGGGATCTGACAGGAGTGCCAGGCTCCTTGGGCCGC...GGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CAGGGAACCAACAACGCAGCTTGTGTGGAACACCCGTGTCCCTGCCGGGAGTCTTCGAAACAGAGGGCATaGTCTTGCACCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QGTNNAACVEHPCPCRESSKQRA*SCTSWW
Trigger: CCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGA...AGACTCCCGGCAGGGACACGGGTGTTCCACACAAGCTGCGTTGTTGGTTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCCTGAGGCCTCTGCCCTaGGCTTGCAGACGGCATTGC +
Preference number: 4 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVLRPLP*ACRRHC
Trigger: GCAATGCCGTCTGCAAGCCCAGGGCAGAGGCCTCAG...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GCAGAAGTGCGAGCAGCAGCCTCGAGGCGGCGAGGCCTGCGCCAGGTGGGCTCTTGTCCCATATTTTCATaGCCAGTTTATACAGGCATT +
Preference number: 4 (lower is better)
Translates to: AEVRAAASRRRGLRQVGSCPIFS*PVYTGI
Trigger: AATGCCTGTATAAACTGGCCATGAAAATATGGGACA...AGAGCCCACCTGGCGCAGGCCTCGCCGCCTCGAGGCTGCTGCTCGCACTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGACTTGTCACCCAAGACTaGATCACACACTGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRLVTQD*ITHCEH
Trigger: GTGCTCACAGTGTGTGATCCAGTCTTGGGTGACAAG...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACGTGGGCATAGCCTGGTaGACGGCTCCTCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDVGIAW*TAPPHG
Trigger: TCCATGGGGAGGAGCCGTCCACCAGGCTATGCCCAC...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467908.1
3UTR CAA 72 bp TTCAGACACCTCATGGGGACCTATGACGGCTCGAGCTaGACACAGGTTCTCCCAGCTGCTCGACACGCTGTG +
Preference number: 4 (lower is better)
Translates to: FRHLMGTYDGSS*TQVLPAARHAV
Trigger: CACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCATAGGTCCCCATGAGGTGTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCATAGCCTGTGTGGTTTaGAAACTGGACAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSIACVV*KLDRVH
Trigger: GTGAACTCTGTCCAGTTTTCAAACCACACAGGCTAT...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR TCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCTGGCAGAATTCTTCCTaGCCCCAACCGTTACCACCC +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRWQNSS*PQPLPP
Trigger: GGGTGGTAACGGTTGGGGTCAGGAAGAATTCTGCCA...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAAACCCTCCCATACGGTaGAACAACAGCCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRNPPIR*NNSLRS
Trigger: AGATCTTAGGCTGTTGTTTCACCGTATGGGAGGGTT...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAGTCTCCACTTGGCAGTaGGGGTATTTCCAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: IKACSPGHTARNTHCRGRVSTWQ*GYFQLN
Trigger: GTTTAACTGGAAATACCCTCACTGCCAAGTGGAGAC...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTAAGGAGTCCCACACCTaGCACTGCGTTCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLKESHT*HCVLML
Trigger: CAGCATGAGAACGCAGTGTCAGGTGTGGGACTCCTT...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCAGGCACGAGAGGCCTaGGCTCAACCACATAGCTTT +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLQAREA*AQPHSF
Trigger: AAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACCAGGCACGAGAGGCCTaGGCTCAACCACATAGCTTT +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDQAREA*AQPHSF
Trigger: AAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTG...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCATGACGGCTCGAGCTTaGCACAGGTTCTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPMTARA*HRFSQL
Trigger: CAGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCAT...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATCCCAGGCAGAAGCTGCCCACGTGACCACCCCAGTAACAACCCTGGGCAGGAGCTGAGCATGCGAACATaGTGGCAATTAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: IPGRSCPRDHPSNNPGQELSMRT*WQLGGF
Trigger: AAAGCCTCCTAATTGCCATCATGTTCGCATGCTCAG...CTCCTGCCCAGGGTTGTTACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR GCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACAGCCTGGGGTTCTGCTaGTTCAGCTCCTGCACAATG +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDSLGFC*FSSCTM
Trigger: CATTGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCT...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCGGGCGTGATAATGTCTaGAAGCGGCACCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPGRDNV*KRHHFF
Trigger: GAAAAAGTGGTGCCGCTTGCAGACATTATCACGCCC...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGAATGTCCATCCGGATaGGTTCCATCACCACGGAGC +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLECPSG*VPSPRS
Trigger: GCTCCGTGGTGATGGAACGCATCCGGATGGACATTC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGGAATGTCCATCCGGATaGGTTCCATCACCACGGAGC +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKECPSG*VPSPRS
Trigger: GCTCCGTGGTGATGGAACGCATCCGGATGGACATTC...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCCCGGCCTGGGCTTTTaGACACTGGATGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDPGLGF*TLDGPL
Trigger: CAGAGGACCATCCAGTGTGCAAAAGCCCAGGCCGGG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTATCCGCAGCTCCAGCTaGATGGGGCTGGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAIRSSS*MGLGLT
Trigger: AGTGAGGCCCAGCCCCATGCAGCTGGAGCTGCGGAT...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAACTGGAGCTTCAAAGCTaGTCTTGGCCCAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKLELQS*SWPSTD
Trigger: GTCTGTGCTGGGCCAAGAGCAGCTTTGAAGCTCCAG...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTTGCCCGCCCCCACCGTaGCCCACACCCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVCPPPP*PTPTLE
Trigger: TTCCAAGGTGGGTGTGGGGCACGGTGGGGGCGGGCA...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGCCCGTAACACCCACTaGAGGGGCAGAAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAARNTH*RGRRSP
Trigger: GGGACTCCTTCTGCCCCTGCAGTGGGTGTTACGGGC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAAGAGAAGTTTCAGATTaGGCCAGAGAGCTCAGGATT +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRREVSD*ARELRI
Trigger: AATCCTGAGCTCTCTGGCGCAATCTGAAACTTCTCT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGCCACCAGGGGCCTCTaGCGAAGTCAGGAGAGACGA +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAATRGL*RSQERR
Trigger: TCGTCTCTCCTGACTTCGGCAGAGGCCCCTGGTGGC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTTGGCCTCTTACCTGGTaGAGGCAACTCTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLWPLTW*RQLSCL
Trigger: CAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCA...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCATAAACATGGACACTaGTGCCCCGACACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLHKHGH*CPDTGG
Trigger: GCCACCTGTGTCGGGGCAGCAGTGTCCATGTTTATG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCGCACATAACCTGCTCTaGTCACTCACAAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVAHNLL*SLTNSS
Trigger: ACTGGAGTTTGTGAGTGAGCAGAGCAGGTTATGTGC...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGGAACGTCAGCACCTCTaGCTCCCATCACCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKERQHL*LPSPRR
Trigger: CCTTCTTGGTGATGGGAGGCAGAGGTGCTGACGTTC...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAATGCAGCCTACACAGTaGTGTAGGACCGAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEMQPTQ*CRTEAH
Trigger: GTGAGCCTCGGTCCTACAGCACTGTGTAGGCTGCAT...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCCCAGCACGAAACAGATaGAGCCTACACAGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPPARNR*SLHSAV
Trigger: TACAGCACTGTGTAGGCTGCATCTGTTTCGTGCTGG...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCCAGGCGGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGGAGAAAGGTATCTCCTaGTGTTACACATGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ARRLQFSYCPGHGGPRSREKGIS*CYTCPS
Trigger: TGAAGGACATGTGTAACAGCAGGAGATACCTTTCTC...CCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCCGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR GCA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCCCAGGAGGTCAAGGCTaGAGTGAGCTGGTTGCGCCA +
Preference number: 4 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVPGGQG*SELVAP
Trigger: TGGCGCAACCAGCTCACTGCAGCCTTGACCTCCTGG...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCACACGTACACCAGCCTaGGGTTCTGCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRTRTPA*GSAASA
Trigger: AGCTGAAGCAGCAGAACCCCAGGCTGGTGTACGTGT...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR CCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTCCTTCCCCGGCCTaGGCTTTTGCACACTGGATG +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPTPSPA*AFAHWM
Trigger: CATCCAGTGTGCAAAAGCCCAGGCCGGGGAAGGAGT...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCACTCCTTCCCCGGCCTaGGCTTTTGCACACTGGATG +
Preference number: 4 (lower is better)
Translates to: LKEPRIKACSPGHTARNTTPSPA*AFAHWM
Trigger: CATCCAGTGTGCAAAAGCCCAGGCCGGGGAAGGAGT...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACGGAACACCCCCGAGATaGCAAACAGGGGCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDGTPPR*QTGARL
Trigger: AAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCC...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGCACTCGGCGGATTCCTaGAAGATGCCGATGGGTTAC +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKHSADS*KMPMGY
Trigger: GTAACCCATCGGCATCTTCCAGGAATCCGCCGAGTG...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGACCCACCTTGGAAGATTaGCAGCTTCCAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRPTLED*QLPGWP
Trigger: AGGCCACCCTGGAAGCTGCCAATCTTCCAAGGTGGG...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCAGCCGTGGGTTCCCTaGAGACACAAACCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LKEPRIKACSPGHTARNTQPWVP*RHKPLH
Trigger: GTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTG...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCCAAAGAACGCACTCCTaGCAAGCGAGTCTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVQRTHS*QASLSR
Trigger: TCTAGAAAGACTCGCTTGCCAGGAGTGCGTTCTTTG...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCCGTGTCTGACTCACTaGCTGAGGTGGGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAPCLTH*LRWGSQ
Trigger: CTGGCTCCCCCACCTCAGCCAGTGAGTCAGACACGG...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCAGGGCCAGGTGGTTCTaGCAGATCCCTGCACTCACA +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPRARWF*QIPALT
Trigger: TGTGAGTGCAGGGATCTGCCAGAACCACCTGGCCCT...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGGAAAAGCTTTCCTGGTaGCTGGCAATGTGGCACACG +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSEKLSW*LAMWHT
Trigger: CGTGTGCCACATTGCCAGCCACCAGGAAAGCTTTTC...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGAGATCAATTCTAATCTaGATCCAAGCCATAGGGAAA +
Preference number: 4 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPRSILI*IQAIGK
Trigger: TTTCCCTATGGCTTGGATCCAGATTAGAATTGATCT...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCCTGGTGATCTCAAGATaGAGACATCCCTCACTTACT +
Preference number: 4 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSLVISR*RHPSLT
Trigger: AGTAAGTGAGGGATGTCTCCATCTTGAGATCACCAG...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGACGCTCCAGGCTTCCCTaGCTTAGGGCTGACAAGACT +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRRSRLP*LRADKT
Trigger: AGTCTTGTCAGCCCTAAGCCAGGGAAGCCTGGAGCG...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACGCACTGTGGAGCGTaGCACAGGCCACACAAACTG +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPTHCGA*HRPHKL
Trigger: CAGTTTGTGTGGCCTGTGCCACGCTCCACAGTGCGT...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGCCCGCAGTATACTGGTaGATGGGAAGAAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSPAVYW*MGRKER
Trigger: CCTCTCCTTTCTTCCCATCCACCAGTATACTGCGGG...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCAGGACAGAGATGCATaGGGTGAGTGGCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDQDRDA*GEWPCG
Trigger: GCCACAGGGCCACTCACCCCATGCATCTCTGTCCTG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCAGTACCCAGGTCGTGTaGGGGATCCCCAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPSTQVV*GIPKQK
Trigger: CTTCTGCTTGGGGATCCCCCACACGACCTGGGTACT...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACGCTTCAGACACCTCATaGGGACCTATGACGGCTCGA +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDASDTS*GPMTAR
Trigger: TCGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGC...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACTCACAAACATCCACATaGCACAAGCAGGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDSQTST*HKQGRP
Trigger: TGGCCGGCCCTGCTTGTGCCATGTGGATGTTTGTGA...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGTCACAAACATCCACATaGCACAAGCAGGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKSQTST*HKQGRP
Trigger: TGGCCGGCCCTGCTTGTGCCATGTGGATGTTTGTGA...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGATCAGCATCGCAAGCTaGTCTGGACGCTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: KQRAWSCTSWWPPAHCGMISIAS*SGRFQS
Trigger: ACTCTGGAAGCGTCCAGACCAGCTTGCGATGCTGAT...CATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp CTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTGACCTTGTCTCTGTGTaGTTTGAAAACTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LLSWARGSKVQVSPGLVPDLVSV*FENWTE
Trigger: CTCTGTCCAGTTTTCAAACCACACAGAGACAAGGTC...AGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCTCCCTGCCGGGAGTCTaGCTTTGTGGCCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: TRTFSNRGGRLDLVSNSFSLPGV*LCGPSQ
Trigger: CTGGGATGGGCCACAAAGCCAGACTCCCGGCAGGGA...GAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTGGCTCTGCAGGCACTTaGGGGATCGGCTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: HKNLLQQGRALGSCVQLIGSAGT*GIGFPT
Trigger: GGTGGGAAAGCCGATCCCCCAAGTGCCTGCAGAGCC...AATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGCCCAGCTCACGGTGTaGAAAAATGAACGCACCTTG +
Preference number: 4 (lower is better)
Translates to: MGPEPTRTFSNRGGRLDLAQLTV*KNERTL
Trigger: CAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGC...AAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCTCTTGCACCTCTTGGTaGCCTCCTGCCCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVSCTSW*PPAHCG
Trigger: CCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGA...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTTGCAACATGAGAATTTaGGGGGACGTAATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLSWARGSKVQVSPGLVPCNMRI*GDVIQP
Trigger: TGGCTGAATTACGTCCCCCCAAATTCTCATGTTGCA...AGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTAGGTGTCACCAGGGCTaGTTCCTGAGGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HKNLLQQGRALGSCVQLIRCHQG*FLRPLP
Trigger: GGGCAGAGGCCTCAGGAACCAGCCCTGGTGACACCT...AATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GCCCTGGGCTTGCAGACGGCATTGCCTCCCTGTTTCCTCATGGGGCTGTCCCTCCTCAGAGGCCTCTTGTaGCTTTCCACAACTTATTGT +
Preference number: 4 (lower is better)
Translates to: ALGLQTALPPCFLMGLSLLRGLL*LSTTYC
Trigger: ACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAG...GAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CAA 72 bp GGTGGCTGGCAATGTGGCACACGCCCCAGTCTCCACTaGGCAGTGAGGGTATTTCCAGTTAAACGCCCTACA +
Preference number: 4 (lower is better)
Translates to: GGWQCGTRPSLH*AVRVFPVKRPT
Trigger: TGTAGGGCGTTTAACTGGAAATACCCTCACTGCCAAGTGGAGACTGGGGCGTGTGCCACATTGCCAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACTCTCACAGGCCACCTTaGGGTTATTGGGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDSHRPP*GYWGAC
Trigger: ACAAGCACCCCAATAACCTCAAGGTGGCCTGTGAGA...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAGGTCCCGCGGGTAGCTaGGAGGTCTGCAGACCGACT +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPGPAGS*EVCRPT
Trigger: AGTCGGTCTGCAGACCTCTCAGCTACCCGCGGGACC...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCCTCATGGGGACCTATaGCGGCTCGAGCTTGACACA +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDPHGDL*RLELDT
Trigger: TGTGTCAAGCTCGAGCCGTCATAGGTCCCCATGAGG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTTTTTCTGCTTTTAAATaGGAGCACGAGCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLSWARGSKVQVSPGLVPFSAFK*EHEQAE
Trigger: CTCAGCTTGCTCGTGCTCTCATTTAAAAGCAGAAAA...AGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR TCA 90 bp GCAGATATTCAGGGCGAAACAGTGAAAGGGAGGCAGTGCGTCACAGGCGTAATCAACCCAGTCCCACACTaGGGTGCTGGGGTTAAGGCT +
Preference number: 4 (lower is better)
Translates to: ADIQGETVKGRQCVTGVINPVPH*GAGVKA
Trigger: AGCCTTAACCCCAGCACCTCAGTGTGGGACTGGGTT...GATTACGCCTGTGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAATATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAGAGACACCAACGCGCTaGGTGTCACGGGCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPETPTR*VSRASG
Trigger: GCCGCTTGCCCGTGACACGCAGCGCGTTGGTGTCTC...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGCGGATTCCTGGAAGATaGCGATGGGTTACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKRIPGR*RWVTRG
Trigger: ACCTCTTGTAACCCATCGGCATCTTCCAGGAATCCG...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGATGCCCGCCCCCACCGTaGCCCACACCCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRCPPPP*PTPTLE
Trigger: TTCCAAGGTGGGTGTGGGGCACGGTGGGGGCGGGCA...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACGCCGTCACCCCAGCCTaGCCAAGGGCCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYAVTPA*PRAWEL
Trigger: CAGCTCCCAGGCCCTTGGGCAGGCTGGGGTGACGGC...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAGTTCTGGCAGATCCCTaGACTCACATACTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRVLADP*THILGR
Trigger: CCTCCCCAGTATGTGAGTGCAGGGATCTGCCAGAAC...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCGAAACCCACTGCCAATaGCCAAGGTTACCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRETHCQ*PRLPSW
Trigger: CCAGGAAGGTAACCTTGGGCATTGGCAGTGGGTTTC...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACGAAACCCACTGCCAATaGCCAAGGTTACCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDETHCQ*PRLPSW
Trigger: CCAGGAAGGTAACCTTGGGCATTGGCAGTGGGTTTC...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGTGCAGGCAACTCTCTTaGCTGGTGATCTCAAGATGG +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSCRQLS*LVISRW
Trigger: CCATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCA...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTGCCCTCCCAGGGCCTTaGACCGTGCACCTACTGTGG +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVALPGP*TVHLLW
Trigger: CCACAGTAGGTGCACGGTGCAAGGCCCTGGGAGGGC...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCACGACAGGCCCAGCTCTaGCCAGGGCTACAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPRQAQL*PGLQGH
Trigger: ATGGCCCTGTAGCCCTGGGCAGAGCTGGGCCTGTCG...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAGCTGTCACGCCACGATaGCTGCTGGGTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPAVTPR*LLGPAG
Trigger: CCCTGCAGGACCCAGCAGGCATCGTGGCGTGACAGC...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACTCTGGGACAGGGTCCTaGTTGGCTCAGACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDSGTGS*LAQTVG
Trigger: TCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGA...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACGCTGGCATTTGGGGGTaGTGTTCCCACCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDAGIWG*CSHHSL
Trigger: AAGGCTGTGGTGGGAACAGCACCCCCAAATGCCAGC...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCAGCACGAAACAGATaGAGCCTACACAGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSPARNR*SLHSAV
Trigger: TACAGCACTGTGTAGGCTGCATCTGTTTCGTGCTGG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCGTGTGTCTGTGGAGGCAGAAAGATTaGTTCAGCCCAGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: TYRTGAGGSGLNQELVCLWRQKD*FSPGGQ
Trigger: TTGACCTCCTGGGCTGAAGCAATCTTTCTGCCTCCA...CAGACACACGAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GCTTTCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTGCGCCAGGTGGGCTCTaGAGGCACTTGGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: AFLLRGLLWLSTTYCPIFAPGGL*RHLGDR
Trigger: CCGATCCCCCAAGTGCCTGCAGAGCCCACCTGGCGC...AAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GCAGATATTCAGGGCGAAACAGTGAAAGGGAGGCAGTGCGTCACAGGCGTAATCCAGAGGGCATGGTCTTaGACCTCTTGGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ADIQGETVKGRQCVTGVIQRAWS*TSWWPP
Trigger: AGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTG...GATTACGCCTGTGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAATATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCCCTGCAGCGGGAACGTaGCCGCCCGGTTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCPAAGT*PPGCPR
Trigger: ACGTGGGCAACCGGGCGGCCACGTTCCCGCTGCAGG...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR CCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCCCTTCGTACAACTCCTaGAGCTCATCTGAATTCAGC +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPPSYNS*SSSEFS
Trigger: GCTGAATTCAGATGAGCTCCAGGAGTTGTACGAAGG...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCCTGGACGACGATCTCTaGGTCCTCGATGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRLDDDL*VLDVPF
Trigger: AAAAGGGACATCGAGGACCCAGAGATCGTCGTCCAG...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTCGGCGGATTCCTaGAAGATGCCGATGGGTTAC +
Preference number: 4 (lower is better)
Translates to: LKEPRIKACSPGHTARNTHSADS*KMPMGY
Trigger: GTAACCCATCGGCATCTTCCAGGAATCCGCCGAGTG...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACGACGGGGTGGTTCTCTaGAGCTTCAAAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDDGVVL*SFKAAL
Trigger: AAGAGCAGCTTTGAAGCTCCAGAGAACCACCCCGTC...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAGACGGGGTGGTTCTCTaGAGCTTCAAAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKDGVVL*SFKAAL
Trigger: AAGAGCAGCTTTGAAGCTCCAGAGAACCACCCCGTC...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGCTTTCTAGAAGACACTaGAATGGCCTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKLSRRH*NGLTGG
Trigger: CCCTCCTGTGAGGCCATTCCAGTGTCTTCTAGAAAG...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAGGTGGAAACGGGCCGTaGACAGGGCAGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPGGNGP*TGQAPA
Trigger: AGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACC...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGACTTACTCATCAGCGTaGCTAAGCCAAGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKTYSSA*LSQASL
Trigger: GAGGCTGGCTTGGCTTAGCCACGCTGATGAGTAAGT...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTACTTACTCATCAGCGTaGCTAAGCCAAGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLTYSSA*LSQASL
Trigger: GAGGCTGGCTTGGCTTAGCCACGCTGATGAGTAAGT...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGACTGCCCCGACACAGGTaGCCCCATCGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRLPRHR*PHRRAG
Trigger: TCCTGCCCTCCGATGGGGCCACCTGTGTCGGGGCAG...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCCACACAGCTCTCACCTaGACTCAGAAAGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPHTALT*TQKARS
Trigger: GGACCTGGCTTTCTGAGTCCAGGTGAGAGCTGTGTG...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCATCTGAGTGCTCGGTaGACGGACACGGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVHLSAR*TDTGAA
Trigger: GGCGGCTCCCGTGTCCGTCCACCGAGCACTCAGATG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAAGTCCCCTAGAAGGATaGCTCACGTCCATCCTACCG +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRSPLEG*LTSILP
Trigger: CGGTAGGATGGACGTGAGCCATCCTTCTAGGGGACT...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAGACCGTGCACCCTGGTaGGTGATGGGATGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRDRAPW*VMGCPG
Trigger: GCCCGGGCATCCCATCACCCACCAGGGTGCACGGTC...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGGCAAGGGTCAGAGATaGAAGGGGACATCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLGKGQR*KGTSLA
Trigger: AGCAAGAGATGTCCCCTTCCATCTCTGACCCTTGCC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAATATCCCACCAGAAATaGGTTTCCTGTTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRISHQK*VSCWTK
Trigger: CTTTGTCCAACAGGAAACCCATTTCTGGTGGGATAT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCCTTCACGGAGATGCTaGCTTCGCAGGCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVPSRRC*LRRPVG
Trigger: GCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACCGCCGTCCTCCCATTaGTCCAGTTTTGCAATCACT +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEPPSSH*SSFAIT
Trigger: AGTGATTGCAAAACTGGACCAATGGGAGGACGGCGG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCCCGCCGTCCTCCCATTaGTCCAGTTTTGCAATCACT +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRPPSSH*SSFAIT
Trigger: AGTGATTGCAAAACTGGACCAATGGGAGGACGGCGG...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGTGGGATGGGGACCTTGTCTCTGTGTaGTTTGAAAACTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: AWSCTSWWPPAHCGMWDGDLVSV*FENWTE
Trigger: CTCTGTCCAGTTTTCAAACCACACAGAGACAAGGTC...CCCATCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCATACTGGCCACAAGGTaGAGGCTCTGCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVILATR*RLCQAQ
Trigger: CTGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTAT...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCCTGTCCCATCCCCTCTaGCTCTACACTCCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVLSHPL*LYTPKA
Trigger: GGCTTTCGGAGTGTAGAGCCAGAGGGGATGGGACAG...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCTGGTCTTGCACCTCTTaGTGGCCTCCTGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVWSCTS*WPPAHC
Trigger: ACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCA...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GCTCAGACAGGGAGCTCCAGGAAATCCTCTCAAAGGGGCCACTGGGAATACTGGTCGAAACAGAGGGCATaGTCTTGCACCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: AQTGSSRKSSQRGHWEYWSKQRA*SCTSWW
Trigger: CCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGA...CCAGTATTCCCAGTGGCCCCTTTGAGAGGATTTCCTGGAGCTCCCTGTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp TGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCCTCAGAGGCCTCTTGTaGCTTTCCACAACTTATTGT +
Preference number: 4 (lower is better)
Translates to: WDVGWAQSPQEPSPTGEGLRGLL*LSTTYC
Trigger: ACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAG...GCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CAA 72 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTaGCCTGGTGATCTCAAGATGGAGACATCCCTCACT +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATL*PGDLKMETSLT
Trigger: AGTGAGGGATGTCTCCATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCTGGGGACTCAGCCTCTaGAACGAGCTCAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPWGLSL*NELKEP
Trigger: TGGTTCTTTGAGCTCGTTTCAGAGGCTGAGTCCCCA...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACCTCTCCTGGTTCGGCTaGTACAGCCAAAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDLSWFG*YSQRKQ
Trigger: CTGTTTTCTTTGGCTGTATCAGCCGAACCAGGAGAG...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACGCTTGCAGCTCAAAATaGGGACAAAGGCGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDACSSK*GQRRFH
Trigger: ATGGAAGCGCCTTTGTCCTCATTTTGAGCTGCAAGC...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGCTTGCAGCTCAAAATaGGGACAAAGGCGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLACSSK*GQRRFH
Trigger: ATGGAAGCGCCTTTGTCCTCATTTTGAGCTGCAAGC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCTTCAGGGCGAAACAGTaGAAGGGAGGCAGTGCGTCA +
Preference number: 4 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVFRAKQ*KGGSAS
Trigger: TGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAA...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCAAACAGGTCCCCAGTaGCCACAAAGACGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAQTGPQ*PQRRRP
Trigger: TGGACGCCGTCTTTGTGGGCACTGGGGACCTGTTTG...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCTTGAGGTTATTGGGGTaGTTGTGTGTCCACGCCAGG +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPLRLLG*LCVHAR
Trigger: CCTGGCGTGGACACACAAGCACCCCAATAACCTCAA...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGACTCTGCAGAACGTGGTaGAAGGTAGACACGGTCTTC +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRLCRTW*KVDTVF
Trigger: GAAGACCGTGTCTACCTTGCACCACGTTCTGCAGAG...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCCGGATTCCTGGAAGATaGCGATGGGTTACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRRIPGR*RWVTRG
Trigger: ACCTCTTGTAACCCATCGGCATCTTCCAGGAATCCG...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACCGGATTCCTGGAAGATaGCGATGGGTTACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDRIPGR*RWVTRG
Trigger: ACCTCTTGTAACCCATCGGCATCTTCCAGGAATCCG...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTGTGGCAAACGCGCAGTaGTCAGCCTGCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVVANAQ*SACCTT
Trigger: CGTGGTGCAGCAGGCTGAGCACTGCGCGTTTGCCAC...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTGACACTGCGTTCTCATaGTGGGTTTTTCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLDTAFS*WVFHQL
Trigger: GAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTC...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCAGAGAAGTTTCAGATTaGGCCAGAGAGCTCAGGATT +
Preference number: 4 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPREVSD*ARELRI
Trigger: AATCCTGAGCTCTCTGGCGCAATCTGAAACTTCTCT...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCAGGAGAGACGAACATaGCCGGGTGGAAACGGGCCG +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVQERRT*PGGNGP
Trigger: CGGCCCGTTTCCACCCGGGCATGTTCGTCTCTCCTG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAGAAAAGAGCTCCAGCTaGCAGAACACTCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKEKSSS*QNTLNL
Trigger: GAGGTTGAGAGTGTTCTGGCAGCTGGAGCTCTTTTC...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGCTCTGAGAACAAACTaGAGAGTCGACAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEALRTN*RVDRRH
Trigger: GTGTCTCCTGTCGACTCTGCAGTTTGTTCTCAGAGC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGACGGAGGGAGCGGGCTaGGCCGCCGTCCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQTEGAG*AAVLPL
Trigger: CAATGGGAGGACGGCGGCGCAGCCCGCTCCCTCCGT...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACCAGCACGAAACAGATaGAGCCTACACAGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEPARNR*SLHSAV
Trigger: TACAGCACTGTGTAGGCTGCATCTGTTTCGTGCTGG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCTCGTGTGTCTGTCCACAGTCCAGTGCTTCGAAGGAATGTCTTTCTCCTTGAAATCCCAGGCAGAAGCTaGCCACGTGACCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: ARVSVHSPVLRRNVFLLEIPGRS*PRDHPS
Trigger: ACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGAT...TTCAAGGAGAAAGACATTCCTTCGAAGCACTGGACTGTGGACAGACACACGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp CAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCCGGACTAATACAGGGTaGCATCGGGAAGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: QEPSPTGEGAWILCPTHSRTNTG*HREGLQ
Trigger: CTGCAGTCCTTCCCGATGGCACCCTGTATTAGTCCG...GGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCTGGACGACGATCTCTaGGTCCTCGATGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LKEPRIKACSPGHTARNTLDDDL*VLDVPF
Trigger: AAAAGGGACATCGAGGACCCAGAGATCGTCGTCCAG...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCATTTCTCTCCAGCCGTaGGTTCCCTGGAGACACAAA +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRISLQP*VPWRHK
Trigger: TTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAAT...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGATTTCTCTCCAGCCGTaGGTTCCCTGGAGACACAAA +
Preference number: 4 (lower is better)
Translates to: GALASYLVQATLLPGDLKISLQP*VPWRHK
Trigger: TTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAAT...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCCTTTCTAGAAGACACTaGAATGGCCTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRLSRRH*NGLTGG
Trigger: CCCTCCTGTGAGGCCATTCCAGTGTCTTCTAGAAAG...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTAGGGCCAGGTGGTTCTaGCAGATCCCTGCACTCACA +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLARARWF*QIPALT
Trigger: TGTGAGTGCAGGGATCTGCCAGAACCACCTGGCCCT...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCCTCAGCGGAAGCCGCTaGCCTGGCAGTGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCLSGSR*PGSERR
Trigger: CCGCCTCTCACTGCCAGGCCAGCGGCTTCCGCTGAG...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAGCTGGGAGTCCGGAGTaGGGACGGTGTCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRAGSPE*GRCPPR
Trigger: TCTGGGTGGACACCGTCCCCACTCCGGACTCCCAGC...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCAGGAGGTGTGCGGCTaGAGTCAGAAACTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAQEVCG*SQKLRC
Trigger: GCACCTCAGTTTCTGACTCCAGCCGCACACCTCCTG...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCGCAGGGACCTGGCCCTaGCTCTGGTCTGGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCAGTWP*LWSGGN
Trigger: GTTGCCGCCAGACCAGAGCCAGGGCCAGGTCCCTGC...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCGACAAAGACCAGAAATaGCCCCGCAGTATACTGGTG +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRDKDQK*PRSILV
Trigger: CACCAGTATACTGCGGGGCCATTTCTGGTCTTTGTC...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGACCTTGTCTCTGTGTaGTTTGAAAACTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LWDVGWAQSPQEPSPTGEDLVSV*FENWTE
Trigger: CTCTGTCCAGTTTTCAAACCACACAGAGACAAGGTC...CTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp TCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATGAGGCCTGCGCCAGGTaGGCTCTGCAGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SSSEASCGFPQLIVPYFHEACAR*ALQALG
Trigger: CCCAAGTGCCTGCAGAGCCCACCTGGCGCAGGCCTC...ATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTATACTGGCCACAAGGTaGAGGCTCTGCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: HKNLLQQGRALGSCVQLIILATR*RLCQAQ
Trigger: CTGGGCTTGGCAGAGCCTCCACCTTGTGGCCAGTAT...AATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCTGTGGGATGTGGGATaGGCCCAGAGCCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: TRTFSNRGGRLDLVSNSFLWDVG*AQSPQE
Trigger: TTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAG...GAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GCTCGTGTGTCTGTCCACAGTCCAGTGCTTCGAAGGAATGTCTTTCTCCTTGAATCTTGCACCTCTTGGTaGCCTCCTGCCCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: ARVSVHSPVLRRNVFLLESCTSW*PPAHCG
Trigger: CCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGA...TTCAAGGAGAAAGACATTCCTTCGAAGCACTGGACTGTGGACAGACACACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp TGGCTTTGTGGCCCATCCCAGGCAGAAGCTGCCCACGTGACCACCCCAGTAACACTCAGAGGCCTCTTGTaGCTTTCCACAACTTATTGT +
Preference number: 4 (lower is better)
Translates to: WLCGPSQAEAAHVTTPVTLRGLL*LSTTYC
Trigger: ACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAG...TGTTACTGGGGTGGTCACGTGGGCAGCTTCTGCCTGGGATGGGCCACAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCACCAGTGGGCATAGCCTaGTGGACGGCTCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPPVGIA*WTAPPH
Trigger: ATGGGGAGGAGCCGTCCACCAGGCTATGCCCACTGG...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467908.1
CDS-3UTR TCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAAGCTGCTCCGTGGTTTaGCAGCAGGCAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPSCSVV*QQAVWG
Trigger: TCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCT...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGGCAGGAGAACCACTTaGACCCAGGAAGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAGRRTT*TQEAEF
Trigger: AAACTCCGCTTCCTGGGTTCAAGTGGTTCTCCTGCC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCAGACGAGTCGCACACTaGAAAAAGTCCCCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: LKEPRIKACSPGHTARNTRRVAH*KKSPRR
Trigger: CCTTCTAGGGGACTTTTTTCAGTGTGCGACTCGTCT...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCCTCCACGCTATTTATTaGGTACAGTCACTTAGATCT +
Preference number: 4 (lower is better)
Translates to: GSNSPTVLGTGVQGPGVTLHAIY*VQSLRS
Trigger: AGATCTAAGTGACTGTACTCAATAAATAGCGTGGAG...GGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTTCAACACGACCGCCATaGAAATATTTATTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSSTRPP*KYLFVD
Trigger: ATCCACAAATAAATATTTTCATGGCGGTCGTGTTGA...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGTCAACACGACCGCCATaGAAATATTTATTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: KGASIHLHGDAGFAGRWASTRPP*KYLFVD
Trigger: ATCCACAAATAAATATTTTCATGGCGGTCGTGTTGA...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCTCTGCAGAACGTGGTaGAAGGTAGACACGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDLCRTW*KVDTVF
Trigger: GAAGACCGTGTCTACCTTGCACCACGTTCTGCAGAG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTATGTCCCTTTTGCTCTaGACCATCCGCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAMSLLL*TIRSSS
Trigger: GCTGGAGCTGCGGATGGTGCAGAGCAAAAGGGACAT...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCGACACTGCGTTCTCATaGTGGGTTTTTCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: LKEPRIKACSPGHTARNTDTAFS*WVFHQL
Trigger: GAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTC...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGATTTCCACAAAAGCCCTaGACCCACAAAGGCACCATC +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRFPQKP*THKGTI
Trigger: GATGGTGCCTTTGTGGGTGCAGGGCTTTTGTGGAAA...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCATAGGGAAACCCACTaGCAATGCCCAAGGTTACCT +
Preference number: 4 (lower is better)
Translates to: LKEPRIKACSPGHTARNTHRETH*QCPRLP
Trigger: AGGTAACCTTGGGCATTGGCAGTGGGTTTCCCTATG...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCGCACATAACCTGCTCTaGTCACTCACAAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRAHNLL*SLTNSS
Trigger: ACTGGAGTTTGTGAGTGAGCAGAGCAGGTTATGTGC...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCACCACCTCCTTCCACCTaGAGATGGCCAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPPPPST*RWPAPA
Trigger: TGCAGGTGCTGGCCATCTGCAGGTGGAAGGAGGTGG...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGACAGCAGGAGAGACCGTaGACCCTGGTGGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRQQERP*TLVGDG
Trigger: CCCATCACCCACCAGGGTGCACGGTCTCTCCTGCTG...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACGCCACCCCCGAACCTTaGAGAGGCCGCACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYATPEP*RGRTPS
Trigger: TGAGGGAGTGCGGCCTCTGCAAGGTTCGGGGGTGGC...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCATTTACAGATGAAGAACACCCGTGTCCCTaGCGGGAGTCTGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: QQGRALGSCVQLIPFTDEEHPCP*RESGFV
Trigger: CACAAAGCCAGACTCCCGGCAGGGACACGGGTGTTC...TTCATCTGTAAATGGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGATGGCAGCTTCCAGGGTaGCCTCTTGCCCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRWQLPG*PLAPGH
Trigger: ATGCCCAGGGGCAAGAGGCCACCCTGGAAGCTGCCA...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTGCACACCCCAGAGCTaGGATGCAGGGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYCTPQS*DAGLQG
Trigger: CCCCTGCAGCCCTGCATCCCAGCTCTGGGGTGTGCA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAGGTGGGGGTACCCCTTaGAGAGTCCGCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRGGGTP*RVRFLG
Trigger: CCCCAAGAAGCGGACTCTCCAAGGGGTACCCCCACC...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCCTTTCTAGAAGACACTaGAATGGCCTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPLSRRH*NGLTGG
Trigger: CCCTCCTGTGAGGCCATTCCAGTGTCTTCTAGAAAG...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCAAAGAACGCACTCCTaGCAAGCGAGTCTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLQRTHS*QASLSR
Trigger: TCTAGAAAGACTCGCTTGCCAGGAGTGCGTTCTTTG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTAGAGGGAGAGACTCCTaGCTACCCGGGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVRGRDS*LPGQQS
Trigger: ACTCTGCTGCCCGGGTAGCCAGGAGTCTCTCCCTCT...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCACTGCACGCCAGCCTaGGTGTCAGAGCGAGACTTC +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVHCTPA*VSERDF
Trigger: GAAGTCTCGCTCTGACACCCAGGCTGGCGTGCAGTG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGGACCGTGCACCCTGGTaGGTGATGGGATGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQDRAPW*VMGCPG
Trigger: GCCCGGGCATCCCATCACCCACCAGGGTGCACGGTC...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGCTTCAGACACCTCATaGGGACCTATGACGGCTCGA +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAASDTS*GPMTAR
Trigger: TCGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCCGCCGTCCTCCCATTaGTCCAGTTTTGCAATCACT +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDPPSSH*SSFAIT
Trigger: AGTGATTGCAAAACTGGACCAATGGGAGGACGGCGG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TACAGGGTGCCATCGGGAAGGACTGCAGCCAGGCGGCTCCAATTCTCCTACTGTTTAATCCTTTGGGGCTaGCAAACGTATCCGAGAATG +
Preference number: 4 (lower is better)
Translates to: YRVPSGRTAARRLQFSYCLILWG*QTYPRM
Trigger: CATTCTCGGATACGTTTGCCAGCCCCAAAGGATTAA...ACAGTAGGAGAATTGGAGCCGCCTGGCTGCAGTCCTTCCCGATGGCACCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp GGAGGCTTTCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATCAGCCACTCGGGAGGTaGAGGCAGAAAGATTGCTTC +
Preference number: 4 (lower is better)
Translates to: GGFPPQRPLVAFHNLLSHQPLGR*RQKDCF
Trigger: GAAGCAATCTTTCTGCCTCCACCTCCCGAGTGGCTG...ATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGAAAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCGCCCAGCTCACGGTGTaGAAAAATGAACGCACCTTG +
Preference number: 4 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVAQLTV*KNERTL
Trigger: CAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGC...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCATTTACAGATGAATCTTGCACCTCTTGGTaGCCTCCTGCCCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: QQGRALGSCVQLIPFTDESCTSW*PPAHCG
Trigger: CCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGA...TTCATCTGTAAATGGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTCCTCCCCATGGACTaGCTCAAACCCGAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLALLPMD*LKPEGD
Trigger: ATCTCCTTCGGGTTTGAGCCAGTCCATGGGGAGGAG...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467908.1
CDS-3UTR TCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTCCTGGAGCTCATCTaGATTCAGCACTTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLALLELI*IQHLAL
Trigger: AAGGGCCAAGTGCTGAATTCAGATGAGCTCCAGGAG...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTGGATTCCTCCTCCTCTaGCTCCCCAGCACAATCAGG +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVGFLLL*LPSTIR
Trigger: CCTGATTGTGCTGGGGAGTCAGAGGAGGAGGAATCC...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGGGTCCCGCGGGTAGCTaGGAGGTCTGCAGACCGACT +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQGPAGS*EVCRPT
Trigger: AGTCGGTCTGCAGACCTCTCAGCTACCCGCGGGACC...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACCTGCAGGGGTGTGGCTaGAATCAAGGCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYLQGCG*NQGRPG
Trigger: CCCTGGCCTGCCTTGATTTCAGCCACACCCCTGCAG...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCCTGATGCACGCTCGTaGAGACATTCAGAACGAACA +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDPDARS*RHSERT
Trigger: TGTTCGTTCTGAATGTCTTCACGAGCGTGCATCAGG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAGGTTACCTTCCTGGATaGGAAACTGAAACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRGYLPG*ETETEG
Trigger: GCCTTCAGTTTCAGTTTCTCATCCAGGAAGGTAACC...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACAGACGAGTCGCACACTaGAAAAAGTCCCCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDRRVAH*KKSPRR
Trigger: CCTTCTAGGGGACTTTTTTCAGTGTGCGACTCGTCT...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTGTCCGTCCCAGCACTaGCGGGCAGGACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYCPSQH*RAGQRC
Trigger: GCATCTCTGTCCTGCCCGTCAGTGCTGGGACGGACA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATGGGCCCACCCAGAGCCCTaGTGGCCTCTTTTAACCTGC +
Preference number: 4 (lower is better)
Translates to: LLRGLLWLSTTYCPIFSWAHPEP*WPLLTC
Trigger: GCAGGTTAAAAGAGGCCATCAGGGCTCTGGGTGGGC...CCATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGAACCAAAAGTTCGAATaGGGGAACAAAGAGGCTATG +
Preference number: 4 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKNQKFE*GNKEAM
Trigger: CATAGCCTCTTTGTTCCCGCATTCGAACTTTTGGTT...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCCAAGAATCAAAGCTTaGTCGCCAGGGCACACCGCC +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVPRIKA*SPGHTA
Trigger: GGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCATTTACGGGAGGCGCCTaGAGGGACAGCCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPFTGGA*RDSHSP
Trigger: AGGAGAATGGCTGTCCCTGCAGGCGCCTCCCGTAAA...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACAGTCTGGGGAGGGGATaGCGGACTCTGCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYSLGRG*RTLPVE
Trigger: CTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCATAGGGAAACCCACTaGCAATGCCCAAGGTTACCT +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDHRETH*QCPRLP
Trigger: AGGTAACCTTGGGCATTGGCAGTGGGTTTCCCTATG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACTGCAGGCAACTCTCTTaGCTGGTGATCTCAAGATGG +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDCRQLS*LVISRW
Trigger: CCATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCA...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTCACGCCACGATGCCTaGTGGGTCCTGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYSRHDA*WVLQGQ
Trigger: CTGTCCCTGCAGGACCCAGCAGGCATCGTGGCGTGA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGGCTGTCACGCCACGATaGCTGCTGGGTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQAVTPR*LLGPAG
Trigger: CCCTGCAGGACCCAGCAGGCATCGTGGCGTGACAGC...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCTGGTGGGTGATGGGATaGCCGGGCAGTGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCWWVMG*PGSGLD
Trigger: GTCCAAGCCACTGCCCGGGCATCCCATCACCCACCA...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACGCTCTGAGAACAAACTaGAGAGTCGACAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDALRTN*RVDRRH
Trigger: GTGTCTCCTGTCGACTCTGCAGTTTGTTCTCAGAGC...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAGAAGGGGACATCTCTTaGTCTGGGACAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPEGDIS*SGTGSC
Trigger: GCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTTC...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCTGGAGGCAGAAAGATTaGTTCAGCCCAGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: QEPSPTGEGAWILCPTHSWRQKD*FSPGGQ
Trigger: TTGACCTCCTGGGCTGAAGCAATCTTTCTGCCTCCA...GGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp GCTTTCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTGCCATCGGGAAGGACTaGAGCCAGGCGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: AFLLRGLLWLSTTYCPIFAIGKD*SQAAPI
Trigger: AATTGGAGCCGCCTGGCTGCAGTCCTTCCCGATGGC...AAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGACCTTCGTACAACTCCTaGAGCTCATCTGAATTCAGC +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRPSYNS*SSSEFS
Trigger: GCTGAATTCAGATGAGCTCCAGGAGTTGTACGAAGG...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAAACTCGGCCTCAAACTaGTTGGGCGTGATAATGTCT +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRNSASN*LGVIMS
Trigger: AGACATTATCACGCCCAACCAGTTTGAGGCCGAGTT...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCCACAGCACCGTGGCCTaGACGACGATCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCHSTVA*TTISGS
Trigger: GGACCCAGAGATCGTCGTCCAGGCCACGGTGCTGTG...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCCTGGAAGATGCCGATaGGTTACAAGAGGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVPGRCR*VTRGPA
Trigger: CGCGGGACCTCTTGTAACCCATCGGCATCTTCCAGG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCACCCCTGGGCATTTGGTaGGGCACAGAACTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPPLGIW*GTELRS
Trigger: TGACCTCAGTTCTGTGCCCCACCAAATGCCCAGGGG...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAAGGACTTGTCAGAGCTaGTGCTGTGGCCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPRTCQS*CCGLCR
Trigger: ACGGCAGAGGCCACAGCACCAGCTCTGACAAGTCCT...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCGGAGCCAGGAAACATaGCTGCGAAACCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVRSQET*LRNPCL
Trigger: CAGACACGGGTTTCGCAGCCATGTTTCCTGGCTCCG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCGTTCTCATGCTaGGTTTTTCACCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPTAFSC*VFHQLT
Trigger: TGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGT...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCAAAAGGATCCTATTGTaGAATTCATCCTTACGGTCT +
Preference number: 4 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVKRILL*NSSLRS
Trigger: AGACCGTAAGGATGAATTCCACAATAGGATCCTTTT...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCGGGATGCCCGGGCAGTaGCTTGGACACAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCGMPGQ*LGHSCH
Trigger: GTGACAGCTGTGTCCAAGCCACTGCCCGGGCATCCC...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAGTGGCCCTGTGGCACTaGAAGGCATATCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPVALWH*KAYPTR
Trigger: TCTGGTGGGATATGCCTTCCAGTGCCACAGGGCCAC...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GCTCGTGTGTCTGTCCACAGTCCAGTGCTTCGAAGGAATGTCTTTCTCCTTGAACAGCCACTCGGGAGGTaGAGGCAGAAAGATTGCTTC +
Preference number: 4 (lower is better)
Translates to: ARVSVHSPVLRRNVFLLEQPLGR*RQKDCF
Trigger: GAAGCAATCTTTCTGCCTCCACCTCCCGAGTGGCTG...TTCAAGGAGAAAGACATTCCTTCGAAGCACTGGACTGTGGACAGACACACGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp TCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATGGCTCTGCAGGCACTTaGGGGATCGGCTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: SSSEASCGFPQLIVPYFHGSAGT*GIGFPT
Trigger: GGTGGGAAAGCCGATCCCCCAAGTGCCTGCAGAGCC...ATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTTCTCAAAGGGGCCACTaGGAATACTGGCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: HKNLLQQGRALGSCVQLISQRGH*EYWPQG
Trigger: ACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGA...AATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp TCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATCCACGTAGCCGCGGATaGCGTGGCTCTGTATGGAGA +
Preference number: 4 (lower is better)
Translates to: SSSEASCGFPQLIVPYFHPRSRG*RGSVWR
Trigger: TCTCCATACAGAGCCACGTCATCCGCGGCTACGTGG...ATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398081.5
CDS-3UTR TCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAACCCTCGTATAACCTGTaGGCACGTAGTCATATTTAT +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEPSYNL*ARSHIY
Trigger: ATAAATATGACTACGTGCTCACAGGTTATACGAGGG...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR TCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGGGTCCCGCGGGTAGCTaGGAGGTCTGCAGACCGACT +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWGPAGS*EVCRPT
Trigger: AGTCGGTCTGCAGACCTCTCAGCTACCCGCGGGACC...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCACAGGGAGGTCACTGCTaGGCAGAGGATGATAGGACT +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPQGGHC*AEDDRT
Trigger: AGTCCTATCATCCTCTGCTCAGCAGTGACCTCCCTG...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGCTGGAGTCAGAAACTaGGGTGCTGTCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEAGVRN*GAVYKN
Trigger: ATTTTTATAGACAGCACCTCAGTTTCTGACTCCAGC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAGCTGGAGTCAGAAACTaGGGTGCTGTCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKAGVRN*GAVYKN
Trigger: ATTTTTATAGACAGCACCTCAGTTTCTGACTCCAGC...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCGGGCTTCAGAGCCGCTaGCCCAGCTTGCAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCGLQSR*PSLQLK
Trigger: TTTGAGCTGCAAGCTGGGTCAGCGGCTCTGAAGCCC...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGGTTCTAAATCAGGAATaGCGCAGCCATGAAGTTAAA +
Preference number: 4 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSVLNQE*RSHEVK
Trigger: TTTAACTTCATGGCTGCGTCATTCCTGATTTAGAAC...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCATGCCTCCGAAGAGCTaGGCTCCATTCCACGGAGGG +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCMPPKS*APFHGG
Trigger: CCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCAT...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAAGGCGACAGGTGCTTTaGTGCCTCCGAAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRRRQVL*CLRRAE
Trigger: CTCAGCTCTTCGGAGGCATCAAAGCACCTGTCGCCT...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CAAGCCCAGCTCACGGTGTGGAAAAATGAACGCACCTTGTGGTACGGCCTCAAGTGTCTCTGTGTGGTTTaGAAACTGGACAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: QAQLTVWKNERTLWYGLKCLCVV*KLDRVH
Trigger: GTGAACTCTGTCCAGTTTTCAAACCACACAGAGACA...CTTGAGGCCGTACCACAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR TCA 90 bp CTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATGGAGGTCAAGGCTGCAGTaGGCTGGTTGCGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LLRGLLWLSTTYCPIFSWRSRLQ*AGCATS
Trigger: TGAAGTGGCGCAACCAGCTCACTGCAGCCTTGACCT...CCATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCCCCGGCCTGGGCTTTTaGACACTGGATGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCPGLGF*TLDGPL
Trigger: CAGAGGACCATCCAGTGTGCAAAAGCCCAGGCCGGG...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGATCCGCAGCTCCAGCTaGATGGGGCTGGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQIRSSS*MGLGLT
Trigger: AGTGAGGCCCAGCCCCATGCAGCTGGAGCTGCGGAT...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGTCCAGGGTGGCCTCTTaGCCCTGGGCATTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQSRVAS*PWAFGG
Trigger: CCCACCAAATGCCCAGGGGCAAGAGGCCACCCTGGA...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGGCCAGCACCTGCACCTaGCAGGCAGGAACACACGAC +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQASTCT*QAGTHD
Trigger: GTCGTGTGTTCCTGCCTGGCAGGTGCAGGTGCTGGC...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGTGGTGGGTGATGGGATaGCCGGGCAGTGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQWWVMG*PGSGLD
Trigger: GTCCAAGCCACTGCCCGGGCATCCCATCACCCACCA...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGCTCTGAGAACAAACTaGAGAGTCGACAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAALRTN*RVDRRH
Trigger: GTGTCTCCTGTCGACTCTGCAGTTTGTTCTCAGAGC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCAGATATTCAGGGCGAAACAGTGAAAGGGAGGCAGTGCGTCACAGGCGTAATCCCATCCAACTTCATGTaGCAGACAAAGCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: ADIQGETVKGRQCVTGVIPSNFM*QTKPDS
Trigger: TGAGTCTGGCTTTGTCTGGCACATGAAGTTGGATGG...GATTACGCCTGTGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAATATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR GCA 90 bp CAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCATTTACAGATGAACGGACTAATACAGGGTaGCATCGGGAAGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: QQGRALGSCVQLIPFTDERTNTG*HREGLQ
Trigger: CTGCAGTCCTTCCCGATGGCACCCTGTATTAGTCCG...TTCATCTGTAAATGGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCAATGTCCACCACCATaGCCAGGAACGACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVQCPPP*PGTTCP
Trigger: GGGACAAGTCGTTCCTGGCCATGGTGGTGGACATTG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR CCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGCACAGCACCGTGGCCTaGACGACGATCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQHSTVA*TTISGS
Trigger: GGACCCAGAGATCGTCGTCCAGGCCACGGTGCTGTG...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGGTCACGGGCAGCACGTaGCAAACGCGCAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQVTGST*QTRSAQ
Trigger: CTGAGCACTGCGCGTTTGCCACGTGCTGCCCGTGAC...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGTCCTTCCTGCTGGTGTaGCGGCGCCCTGTAGGGACC +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWSFLLV*RRPVGT
Trigger: GGTCCCTACAGGGCGCCGCCACACCAGCAGGAAGGA...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTGGTGGCTGGCAATGTaGCACACGCCCCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYWWLAM*HTPQSP
Trigger: TGGAGACTGGGGCGTGTGCCACATTGCCAGCCACCA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAACGCACTGTGGAGCGTaGCACAGGCCACACAAACTG +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRTHCGA*HRPHKL
Trigger: CAGTTTGTGTGGCCTGTGCCACGCTCCACAGTGCGT...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCAAATGGGTTTCCTGTTaGACAAAGACCAGAAATGGC +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRKWVSC*TKTRNG
Trigger: GCCATTTCTGGTCTTTGTCCAACAGGAAACCCATTT...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCACTGCTCGACACGCTGTaGGATGTACTGGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPLLDTL*DVLEGS
Trigger: AGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAG...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATGGCTGTCCCATCCCCTCTaGCTCTACACTCCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LLRGLLWLSTTYCPIFSWLSHPL*LYTPKA
Trigger: GGCTTTCGGAGTGTAGAGCCAGAGGGGATGGGACAG...CCATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CAAGCCCAGCTCACGGTGTGGAAAAATGAACGCACCTTGTGGTACGGCCTCAAGTGCAACATGAGAATTTaGGGGGACGTAATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QAQLTVWKNERTLWYGLKCNMRI*GDVIQP
Trigger: TGGCTGAATTACGTCCCCCCAAATTCTCATGTTGCA...CTTGAGGCCGTACCACAAGGTGCGTTCATTTTTCCACACCGTGAGCTGGGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
3UTR CAA 72 bp GAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCGCTaGGATCTTGTGTCCAACTCATTCCATTTACAGATG +
Preference number: 4 (lower is better)
Translates to: EPTRTFSNRGGR*DLVSNSFHLQM
Trigger: CATCTGTAAATGGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTTGGCACGTTTCACAATaGAGACCAGCAGATGCCGGA +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVWHVSQ*RPADAG
Trigger: TCCGGCATCTGCTGGTCTTCATTGTGAAACGTGCCA...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGCTGCAGGGGTGTGGCTaGAATCAAGGCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWLQGCG*NQGRPG
Trigger: CCCTGGCCTGCCTTGATTTCAGCCACACCCCTGCAG...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGAGCTGCTCCGTGGTTTaGCAGCAGGCAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQSCSVV*QQAVWG
Trigger: TCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCT...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTACTGTTTTAAACAAATaGACACACCGTGTTGCAATG +
Preference number: 4 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSTVLNK*THRVAM
Trigger: CATTGCAACACGGTGTGTTCATTTGTTTAAAACAGT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACCCTCATGGGGACCTATaGCGGCTCGAGCTTGACACA +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYPHGDL*RLELDT
Trigger: TGTGTCAAGCTCGAGCCGTCATAGGTCCCCATGAGG...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCATTTACAGATGAACACGGTGTGGAAAAATaGACGCACCTTGTGGTACGG +
Preference number: 4 (lower is better)
Translates to: QQGRALGSCVQLIPFTDEHGVEK*THLVVR
Trigger: CCGTACCACAAGGTGCGTTCATTTTTCCACACCGTG...TTCATCTGTAAATGGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp TACAGGGTGCCATCGGGAAGGACTGCAGCCAGGCGGCTCCAATTCTCCTACTGTCATTCCATTTACAGATaGAAAAGCACAGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: YRVPSGRTAARRLQFSYCHSIYR*KSTGKQ
Trigger: TTGTTTGCCTGTGCTTTTTCATCTGTAAATGGAATG...ACAGTAGGAGAATTGGAGCCGCCTGGCTGCAGTCCTTCCCGATGGCACCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGGCACAATCAGGTAGTTaGTGCCCTGCGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQAQSGS*CPAGRA
Trigger: TGCCCTCCCCGCAGGGCAGCAACTACCTGATTGTGC...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCAACCAAAAGTTCGAATaGGGGAACAAAGAGGCTATG +
Preference number: 4 (lower is better)
Translates to: SKNQESKLARQGTPPVTPNQKFE*GNKEAM
Trigger: CATAGCCTCTTTGTTCCCGCATTCGAACTTTTGGTT...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGATGGCCTCTTACCTGGTaGAGGCAACTCTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRWPLTW*RQLSCL
Trigger: CAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCA...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGAAACTCCAGTTCCCCTaGTCTGGGCCCAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWKLQFP*SGPRQA
Trigger: CGCCTGCCTGGGCCCAGAGCAGGGGAACTGGAGTTT...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGTCACGCCACGATGCCTaGTGGGTCCTGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWSRHDA*WVLQGQ
Trigger: CTGTCCCTGCAGGACCCAGCAGGCATCGTGGCGTGA...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAGAGGACTCACGTCCATaGTCCAGAACGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLREDSRP*SRTSAP
Trigger: AGGTGCTGACGTTCTGGAGCATGGACGTGAGTCCTC...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGGCCACCCCCGAACCTTaGAGAGGCCGCACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKATPEP*RGRTPS
Trigger: TGAGGGAGTGCGGCCTCTGCAAGGTTCGGGGGTGGC...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGACACTCGGCGGATTCCTaGAAGATGCCGATGGGTTAC +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRHSADS*KMPMGY
Trigger: GTAACCCATCGGCATCTTCCAGGAATCCGCCGAGTG...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTCCTTCCTGCTGGTGTaGCGGCGCCCTGTAGGGACC +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKSFLLV*RRPVGT
Trigger: GGTCCCTACAGGGCGCCGCCACACCAGCAGGAAGGA...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGTATCCTCCCCTGTGCTaGGAGTCCGGAGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWYPPLC*ESGVGT
Trigger: CGTCCCCACTCCGGACTCCCAGCACAGGGGAGGATA...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCCCGCAGTATACTGGTaGATGGGAAGAAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVPAVYW*MGRKER
Trigger: CCTCTCCTTTCTTCCCATCCACCAGTATACTGCGGG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAATATCCCACCAGAAATaGGTTTCCTGTTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRISHQK*VSCWTK
Trigger: CTTTGTCCAACAGGAAACCCATTTCTGGTGGGATAT...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCATTTACAGATGAATCTCAAAGGGGCCACTaGGAATACTGGCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: QQGRALGSCVQLIPFTDESQRGH*EYWPQG
Trigger: ACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGA...TTCATCTGTAAATGGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp CCTATCGAAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGTCCCATATTTTCATaGCCAGTTTATACAGGCATT +
Preference number: 4 (lower is better)
Translates to: PIETEGMVLHLLVASCPLCPIFS*PVYTGI
Trigger: AATGCCTGTATAAACTGGCCATGAAAATATGGGACA...CAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CAA 72 bp ACTGGAAGGCATATCCCACCAGAAATGGGTTTCCTGTaGGACAAAGACCAGAAATGGCCCCGCAGTATACTG +
Preference number: 4 (lower is better)
Translates to: TGRHIPPEMGFL*DKDQKWPRSIL
Trigger: CAGTATACTGCGGGGCCATTTCTGGTCTTTGTCCAACAGGAAACCCATTTCTGGTGGGATATGCCTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGCCACGTAGCCGCGGATaGCGTGGCTCTGTATGGAGA +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWPRSRG*RGSVWR
Trigger: TCTCCATACAGAGCCACGTCATCCGCGGCTACGTGG...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000468090.5
CDS-3UTR TCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACCCCTCGTATAACCTGTaGGCACGTAGTCATATTTAT +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDPSYNL*ARSHIY
Trigger: ATAAATATGACTACGTGCTCACAGGTTATACGAGGG...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR TCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCAAGGAGTCCCACACCTaGCACTGCGTTCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCKESHT*HCVLML
Trigger: CAGCATGAGAACGCAGTGTCAGGTGTGGGACTCCTT...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp TATTTCTCTCCAGCCGTGGGTTCCCTGGAGACACAAACCTCTGCACACCCCAGAGTTCTAAATCAGGAATaGCGCAGCCATGAAGTTAAA +
Preference number: 4 (lower is better)
Translates to: YFSPAVGSLETQTSAHPRVLNQE*RSHEVK
Trigger: TTTAACTTCATGGCTGCGTCATTCCTGATTTAGAAC...TCTGGGGTGTGCAGAGGTTTGTGTCTCCAGGGAACCCACGGCTGGAGAGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCTGTCTCTGTGTGGTTTaGAAACTGGACAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: TRTFSNRGGRLDLVSNSFCLCVV*KLDRVH
Trigger: GTGAACTCTGTCCAGTTTTCAAACCACACAGAGACA...GAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCAGACGGCGTCCACTTTaGGAATGTCCATCCGGATGC +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCRRRPL*ECPSGC
Trigger: GCATCCGGATGGACATTCGCAAAGTGGACGCCGTCT...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGATTGAGGTTATTGGGGTaGTTGTGTGTCCACGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRLRLLG*LCVHAR
Trigger: CCTGGCGTGGACACACAAGCACCCCAATAACCTCAA...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTTGTCCTGTCTACAAATaGTGTGGCTCAATGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLACPVYK*CGSMCC
Trigger: ACAGCACATTGAGCCACAGCATTTGTAGACAGGACA...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCGTTCTGGCAGATCCCTaGACTCACATACTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCVLADP*THILGR
Trigger: CCTCCCCAGTATGTGAGTGCAGGGATCTGCCAGAAC...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTTTTCCACAAAAGCCCTaGACCCACAAAGGCACCATC +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVFPQKP*THKGTI
Trigger: GATGGTGCCTTTGTGGGTGCAGGGCTTTTGTGGAAA...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTTGCAGGCAACTCTCTTaGCTGGTGATCTCAAGATGG +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVCRQLS*LVISRW
Trigger: CCATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCA...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGCAGGGCCTTGCACCGTaGACCTACTGTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKQGLAP*TYCGLC
Trigger: GCAGAGCCCACAGTAGGTGCACGGTGCAAGGCCCTG...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTTGTCTGCACATAACCTaGTCTGCTCACTCACAAACT +
Preference number: 4 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLACLHIT*SAHSQT
Trigger: AGTTTGTGAGTGAGCAGAGCAGGTTATGTGCAGACA...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGACAGGTTCTCCCAGCTaGTCGACACGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQTGSPS*STRCGM
Trigger: CATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGT...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TACAGGGTGCCATCGGGAAGGACTGCAGCCAGGCGGCTCCAATTCTCCTACTGTAATGAATCTCCTTTGTaGTCAAACAGCGTATCTTTA +
Preference number: 4 (lower is better)
Translates to: YRVPSGRTAARRLQFSYCNESPL*SNSVSL
Trigger: TAAAGATACGCTGTTTGAGCACAAAGGAGATTCATT...ACAGTAGGAGAATTGGAGCCGCCTGGCTGCAGTCCTTCCCGATGGCACCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCTTGTCACCCAAGACTaGATCACACACGTACACCAG +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVLVTQD*ITHVHQ
Trigger: CTGGTGTACGTGTGTGATCCAGTCTTGGGTGACAAG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR CCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGTCCACGCCAGGAGCATaGCAGCAAACAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWSTPGA*QQTGPQ
Trigger: CTGGGGACCTGTTTGCTGCCATGCTCCTGGCGTGGA...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGCCGTGTCTGACTCACTaGCTGAGGTGGGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKPCLTH*LRWGSQ
Trigger: CTGGCTCCCCCACCTCAGCCAGTGAGTCAGACACGG...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAAGATCAATTCTAATCTaGATCCAAGCCATAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKRSILI*IQAIGK
Trigger: TTTCCCTATGGCTTGGATCCAGATTAGAATTGATCT...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCAAAAGGATCCTATTGTaGAATTCATCCTTACGGTCT +
Preference number: 4 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRKRILL*NSSLRS
Trigger: AGACCGTAAGGATGAATTCCACAATAGGATCCTTTT...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCACACAGTGGGGACACCTCTGATCTCCATAAACATGGACACTGCTGCCCCGACAAAAGGATCCTATTGTaGAATTCATCCTTACGGTCT +
Preference number: 4 (lower is better)
Translates to: PHSGDTSDLHKHGHCCPDKRILL*NSSLRS
Trigger: AGACCGTAAGGATGAATTCCACAATAGGATCCTTTT...GTCGGGGCAGCAGTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGAGAGGGAGAGACTCCTaGCTACCCGGGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWRGRDS*LPGQQS
Trigger: ACTCTGCTGCCCGGGTAGCCAGGAGTCTCTCCCTCT...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACAAATGGGTTTCCTGTTaGACAAAGACCAGAAATGGC +
Preference number: 4 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDKWVSC*TKTRNG
Trigger: GCCATTTCTGGTCTTTGTCCAACAGGAAACCCATTT...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATAGAAAGCCAGTCAGATaGCTACACTCTGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSSEASCGFPQLIVPYFHRKPVR*LHSALG
Trigger: CCCCAGGGCAGAGTGTAGCCATCTGACTGGCTTTCT...ATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CCA 90 bp CTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATGGTCGAAACAGAGGGCATaGTCTTGCACCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLRGLLWLSTTYCPIFSWSKQRA*SCTSWW
Trigger: CCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGA...CCATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGACTAGGCGCAGTGCTTaGCAGGTCCCAACGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKTRRSA*QVPTAA
Trigger: GGCAGCCGTTGGGACCTGCCAAGCACTGCGCCTAGT...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467908.1
CDS-3UTR TCA 90 bp GTATCTTTAACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCCTCCACGCTATTTATTaGGTACAGTCACTTAGATCT +
Preference number: 4 (lower is better)
Translates to: VSLTYRTGAGGSGLNQELLHAIY*VQSLRS
Trigger: AGATCTAAGTGACTGTACTCAATAAATAGCGTGGAG...GAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGTTAAAGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCTGCTGCTTCAGCTCCTaGACAATGTCCACCACCATG +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCCCFSS*TMSTTM
Trigger: CATGGTGGTGGACATTGTGCAGGAGCTGAAGCAGCA...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGCAATCAGGTAGTTGCTaGCCTGCGGGGAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKQSGSC*PAGRAG
Trigger: ACCTGCCCTCCCCGCAGGGCAGCAACTACCTGATTG...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGAGACGGCGTCCACTTTaGGAATGTCCATCCGGATGC +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQRRRPL*ECPSGC
Trigger: GCATCCGGATGGACATTCGCAAAGTGGACGCCGTCT...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTCAGCACAGACCTTACTaGGTTAGCATCTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVQHRPY*VSIFLK
Trigger: CTTGAGGAAGATGCTAACGCAGTAAGGTCTGTGCTG...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGTGCTGTGGCTCAATGTaGTGTCACGGGCAGCACGTG +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWCCGSM*CHGQHV
Trigger: CACGTGCTGCCCGTGACAGCACATTGAGCCACAGCA...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGTCTGGGACAGGGTCCTaGTTGGCTCAGACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWSGTGS*LAQTVG
Trigger: TCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGA...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGATGCAGCCTACACAGTaGTGTAGGACCGAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQMQPTQ*CRTEAH
Trigger: GTGAGCCTCGGTCCTACAGCACTGTGTAGGCTGCAT...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGGTCCTCTGCAGAACGTaGTGCAAGGTAGACACGGTC +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQVLCRT*CKVDTV
Trigger: GACCGTGTCTACCTTGCACCACGTTCTGCAGAGGAC...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCCTGGACGACGATCTCTaGGTCCTCGATGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCLDDDL*VLDVPF
Trigger: AAAAGGGACATCGAGGACCCAGAGATCGTCGTCCAG...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACGACGGGGTGGTTCTCTaGAGCTTCAAAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYDGVVL*SFKAAL
Trigger: AAGAGCAGCTTTGAAGCTCCAGAGAACCACCCCGTC...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTAAAGAAAAGCTTTCCTaGTGGCTGGCAATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVKEKLS*WLAMWH
Trigger: GTGCCACATTGCCAGCCACCAGGAAAGCTTTTCTTT...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAATAAGCAGGCGATGTTaGACCAGTATAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPISRRC*TSIAVT
Trigger: GGTGACAGCTATACTGGTCCAACATCGCCTGCTTAT...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCACTTACTCATCAGCGTaGCTAAGCCAAGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCTYSSA*LSQASL
Trigger: GAGGCTGGCTTGGCTTAGCCACGCTGATGAGTAAGT...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGCTATCCGCCAGACACTaGGCTTGCCCTTGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKLSARH*ACPCCP
Trigger: CGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAG...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGCCAGGGGCTGGGTCTTaGGTTAGAAAGTCACTCGAG +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQPGAGS*VRKSLE
Trigger: CTCGAGTGACTTTCTAACCCAAGACCCAGCCCCTGG...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGCTTCCACAAGGAACCTaGCGGGGTGGTTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKLPQGT*RGGSLE
Trigger: CTCCAGAGAACCACCCCGTCAGGTTCCTTGTGGAAG...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCAGACGAGTCGCACACTaGAAAAAGTCCCCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCRRVAH*KKSPRR
Trigger: CCTTCTAGGGGACTTTTTTCAGTGTGCGACTCGTCT...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCAAACGTATCCGAGAATaGAGTCGCTATTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TRTFSNRGGRLDLVSNSFKRIRE*SRYFLL
Trigger: AAGCAGAAAATAGCGACTTCATTCTCGGATACGTTT...GAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR TCA 90 bp ACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCTCCACGCTATTTATTaGGTACAGTCACTTAGATCT +
Preference number: 4 (lower is better)
Translates to: TRTFSNRGGRLDLVSNSFLHAIY*VQSLRS
Trigger: AGATCTAAGTGACTGTACTCAATAAATAGCGTGGAG...GAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGAGACGGCGTCCACTTTaGGAATGTCCATCCGGATGC +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWRRRPL*ECPSGC
Trigger: GCATCCGGATGGACATTCGCAAAGTGGACGCCGTCT...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGCACTGGATGGTCCTCTaGAGAACGTGGTGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQHWMVL*RTWCKV
Trigger: TACCTTGCACCACGTTCTGCAGAGGACCATCCAGTG...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGATGTCCCTTTTGCTCTaGACCATCCGCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWMSLLL*TIRSSS
Trigger: GCTGGAGCTGCGGATGGTGCAGAGCAAAAGGGACAT...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTACGGGAGGCGCCTaGAGGGACAGCCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKFTGGA*RDSHSP
Trigger: AGGAGAATGGCTGTCCCTGCAGGCGCCTCCCGTAAA...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGCATAAACATGGACACTaGTGCCCCGACACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWHKHGH*CPDTGG
Trigger: GCCACCTGTGTCGGGGCAGCAGTGTCCATGTTTATG...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGGCTGGCATTTGGGGGTaGTGTTCCCACCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKAGIWG*CSHHSL
Trigger: AAGGCTGTGGTGGGAACAGCACCCCCAAATGCCAGC...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGCAATGTCCACCACCATaGCCAGGAACGACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWQCPPP*PGTTCP
Trigger: GGGACAAGTCGTTCCTGGCCATGGTGGTGGACATTG...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR CCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGACACGTACACCAGCCTaGGGTTCTGCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWTRTPA*GSAASA
Trigger: AGCTGAAGCAGCAGAACCCCAGGCTGGTGTACGTGT...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR CCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACCTTGTCACCCAAGACTaGATCACACACGTACACCAG +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYLVTQD*ITHVHQ
Trigger: CTGGTGTACGTGTGTGATCCAGTCTTGGGTGACAAG...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291565.9
ENST00000467908.1
CDS-3UTR CCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGGTCCTCTGCAGAACGTaGTGCAAGGTAGACACGGTC +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWVLCRT*CKVDTV
Trigger: GACCGTGTCTACCTTGCACCACGTTCTGCAGAGGAC...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGCTTTGGCCTCTTACCTaGTGCAGGCAACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQLWPLT*CRQLSC
Trigger: GCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAG...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGTCACAAACATCCACATaGCACAAGCAGGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWSQTST*HKQGRP
Trigger: TGGCCGGCCCTGCTTGTGCCATGTGGATGTTTGTGA...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp TCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATCCATGCCTCTGGAATTaGCATCTCTGTACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSSEASCGFPQLIVPYFHPCLWN*HLCTAV
Trigger: CACTGCTGTACAGAGATGCCAATTCCAGAGGCATGG...ATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327574.4
3UTR CAA 72 bp TCCACAGTCCAGTGCTTCGAAGGAATGTCTTTCTCCTaGAACACGGTGTTTACAGATAAGACAGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: STVQCFEGMSFS*NTVFTDKTAGL
Trigger: GAGACCTGCTGTCTTATCTGTAAACACCGTGTTCAAGGAGAAAGACATTCCTTCGAAGCACTGGACTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCAACCCTCCCATACGGTaGAACAACAGCCTAAGATCT +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCNPPIR*NNSLRS
Trigger: AGATCTTAGGCTGTTGTTTCACCGTATGGGAGGGTT...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGCTCTCCTGGTTCGGCTaGTACAGCCAAAGAAAACAG +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQLSWFG*YSQRKQ
Trigger: CTGTTTTCTTTGGCTGTATCAGCCGAACCAGGAGAG...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GCTTTCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTGTCTCTGTGTGGTTTaGAAACTGGACAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: AFLLRGLLWLSTTYCPIFCLCVV*KLDRVH
Trigger: GTGAACTCTGTCCAGTTTTCAAACCACACAGAGACA...AAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR GCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCGCACATAACCTGCTCTaGTCACTCACAAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCAHNLL*SLTNSS
Trigger: ACTGGAGTTTGTGAGTGAGCAGAGCAGGTTATGTGC...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGGTCCTCTGCAGAACGTaGTGCAAGGTAGACACGGTC +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKVLCRT*CKVDTV
Trigger: GACCGTGTCTACCTTGCACCACGTTCTGCAGAGGAC...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGACAGGCCACACAAACTaGCTCCTACCACCTAACAGA +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQTGHTN*LLPPNR
Trigger: TCTGTTAGGTGGTAGGAGCCAGTTTGTGTGGCCTGT...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp CTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATGGTGCAACATGAGAATTTaGGGGGACGTAATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLRGLLWLSTTYCPIFSWCNMRI*GDVIQP
Trigger: TGGCTGAATTACGTCCCCCCAAATTCTCATGTTGCA...CCATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp GGAGGCTTTCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATTGTCCCATATTTTCATaGCCAGTTTATACAGGCATT +
Preference number: 4 (lower is better)
Translates to: GGFPPQRPLVAFHNLLSHCPIFS*PVYTGI
Trigger: AATGCCTGTATAAACTGGCCATGAAAATATGGGACA...ATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGAAAGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CAA 72 bp CCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATaGTCCCATATTTTCATGGCCAGTTTATACAGGCAT +
Preference number: 4 (lower is better)
Translates to: PPQRPLVAFHNL*SHIFMASLYRH
Trigger: ATGCCTGTATAAACTGGCCATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR TCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGGTCTCCACTTGGCAGTaGGGGTATTTCCAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQVSTWQ*GYFQLN
Trigger: GTTTAACTGGAAATACCCTCACTGCCAAGTGGAGAC...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTCTGCCCGTAGAGGCTaGCAATTTCCACAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKSARRG*QFPQKP
Trigger: GGGCTTTTGTGGAAATTGTCAGCCTCTACGGGCAGA...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTGTTCTAAATCAGGAATaGCGCAGCCATGAAGTTAAA +
Preference number: 4 (lower is better)
Translates to: FSDTRHERPELNHIAFIVVLNQE*RSHEVK
Trigger: TTTAACTTCATGGCTGCGTCATTCCTGATTTAGAAC...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGCTCTGCAGAACGTGGTaGAAGGTAGACACGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKLCRTW*KVDTVF
Trigger: GAAGACCGTGTCTACCTTGCACCACGTTCTGCAGAG...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACATGAAGACCAGCAGATaGCGGACACTCATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYMKTSR*RTLMKE
Trigger: TTCTTTCATGAGTGTCCGGCATCTGCTGGTCTTCAT...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTGTCTGCACATAACCTaGTCTGCTCACTCACAAACT +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYCLHIT*SAHSQT
Trigger: AGTTTGTGAGTGAGCAGAGCAGGTTATGTGCAGACA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCCTGGTGATCTCAAGATaGAGACATCCCTCACTTACT +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCLVISR*RHPSLT
Trigger: AGTAAGTGAGGGATGTCTCCATCTTGAGATCACCAG...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAACTGTTTTAAACAAATaGACACACCGTGTTGCAATG +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPTVLNK*THRVAM
Trigger: CATTGCAACACGGTGTGTTCATTTGTTTAAAACAGT...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACCTGGATCACACACTGTaGGCACGTAGTCATATTTAT +
Preference number: 4 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYLDHTL*ARSHIY
Trigger: ATAAATATGACTACGTGCTCACAGTGTGTGATCCAG...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468090.5
CDS-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGGGGCGTGATAATGTCTaGAAGCGGCACCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKGRDNV*KRHHFF
Trigger: GAAAAAGTGGTGCCGCTTGCAGACATTATCACGCCC...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGACTCCTTCTCAGAGATaGAAAGACAGAGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKTPSQR*KDRGHP
Trigger: TGGGTGGCCTCTGTCTTTGCATCTCTGAGAAGGAGT...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGTGTCCTGTCTACAAATaGTGTGGCTCAATGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQCPVYK*CGSMCC
Trigger: ACAGCACATTGAGCCACAGCATTTGTAGACAGGACA...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp GCTCGTGTGTCTGTCCACAGTCCAGTGCTTCGAAGGAATGTCTTTCTCCTTGAAAATGAATCTCCTTTGTaGTCAAACAGCGTATCTTTA +
Preference number: 4 (lower is better)
Translates to: ARVSVHSPVLRRNVFLLENESPL*SNSVSL
Trigger: TAAAGATACGCTGTTTGAGCACAAAGGAGATTCATT...TTCAAGGAGAAAGACATTCCTTCGAAGCACTGGACTGTGGACAGACACACGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGCCTTCGTACAACTCCTaGAGCTCATCTGAATTCAGC +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWPSYNS*SSSEFS
Trigger: GCTGAATTCAGATGAGCTCCAGGAGTTGTACGAAGG...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGACTGCGTTCTCATGCTaGGTTTTTCACCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWTAFSC*VFHQLT
Trigger: TGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGT...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAAGATCAATTCTAATCTaGATCCAAGCCATAGGGAAA +
Preference number: 4 (lower is better)
Translates to: MALRQTLHVFTGTNTETPRSILI*IQAIGK
Trigger: TTTCCCTATGGCTTGGATCCAGATTAGAATTGATCT...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGCAAAGAACGCACTCCTaGCAAGCGAGTCTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKQRTHS*QASLSR
Trigger: TCTAGAAAGACTCGCTTGCCAGGAGTGCGTTCTTTG...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CCA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGATAAGCAGGCGATGTTaGACCAGTATAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: DFKKDPIVEFILTVYREKISRRC*TSIAVT
Trigger: GGTGACAGCTATACTGGTCCAACATCGCCTGCTTAT...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
3UTR CAA 72 bp AGCCGGGTTTTCAGATCACAAATTTCTGTGACCACTTaGTTATTTTTCACAAAGCACGACTGGCACGTTTCA +
Preference number: 4 (lower is better)
Translates to: SRVFRSQISVTT*LFFTKHDWHVS
Trigger: TGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAGTGGTCACAGAAATTTGTGATCTGAAAACCCGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR TCA 90 bp ACAAAGATCAATTCTAATCTGGATCCAAGCCATAGGGAAACCCACTGCCAATGCACTGTTTTAAACAAATaGACACACCGTGTTGCAATG +
Preference number: 4 (lower is better)
Translates to: TKINSNLDPSHRETHCQCTVLNK*THRVAM
Trigger: CATTGCAACACGGTGTGTTCATTTGTTTAAAACAGT...GCATTGGCAGTGGGTTTCCCTATGGCTTGGATCCAGATTAGAATTGATCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR GCA 90 bp CTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATATTTTCATGGAATGAATCTCCTTTGTaGTCAAACAGCGTATCTTTA +
Preference number: 4 (lower is better)
Translates to: LLRGLLWLSTTYCPIFSWNESPL*SNSVSL
Trigger: TAAAGATACGCTGTTTGAGCACAAAGGAGATTCATT...CCATGAAAATATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
3UTR CAA 72 bp ATTAAACTTCTGTACCCTGACAATAAGCAGGCGATGTaGGACCAGTATAGCTGTCACCTTAAAATAAATTCT +
Preference number: 4 (lower is better)
Translates to: IKLLYPDNKQAM*DQYSCHLKINS
Trigger: AGAATTTATTTTAAGGTGACAGCTATACTGGTCCAACATCGCCTGCTTATTGTCAGGGTACAGAAGTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS GCA 90 bp TCCGGCTCGGCTCGGGCTCGGGCTCCGGCCCCGGCTCCCCTCGGCTaGGACTCTGGCTCTGGCGCGCGGCGGACCCGATCAGCGCAGACG +
Preference number: 5 (lower is better)
Translates to: SGSARARAPAPAPLG*DSGSGARRTRSAQT
Trigger: CGTCTGCGCTGATCGGGTCCGCCGCGCGCCAGAGCCAGAGTCGCAGCCGAGGGGAGCCGGGGCCGGAGCCCGAGCCCGAGCCGAGCCGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000398081.5
ENST00000468090.5
CDS CCA 90 bp CCGAGCCACCGGGGAGCCGGCTCCGCCAATGCACGTGCTGAACCCTaGAGGACAGGCTGCGGACTGCCCACCACGGAGAGCCCGGAGGGC +
Preference number: 5 (lower is better)
Translates to: PSHRGAGSANARAEP*RTGCGLPTTESPEG
Trigger: GCCCTCCGGGCTCTCCGTGGTGGGCAGTCCGCAGCCTGTCCTCCAGGGTTCAGCACGTGCATTGGCGGAGCCGGCTCCCCGGTGGCTCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS GCA 90 bp CAGTCATCCGGCTGGACCGCAGGAGCTCTCCGACTCCCTTCCCCCTaGCGCCCGCGACACAAGCTCATCCCCTGCCCAGGCGCAGCCCGC +
Preference number: 5 (lower is better)
Translates to: QSSGWTAGALRLPSP*RPRHKLIPCPGAAR
Trigger: GCGGGCTGCGCCTGGGCAGGGGATGAGCTTGTGTCGCGGGCGGCAGGGGGAAGGGAGTCGGAGAGCTCCTGCGGTCCAGCCGGATGACTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498040.5
CDS GCA 90 bp GCTCCGCCAATGCACGTGCTGAACCCTGGAGGACAGGCTGCGGACTaGCCACCACGGAGAGCCCGGAGGGCTGAGCAGATGCCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: APPMHVLNPGGQAAD*PPRRARRAEQMPGP
Trigger: GGGACCGGGCATCTGCTCAGCCCTCCGGGCTCTCCGTGGTGGGCAGTCCGCAGCCTGTCCTCCAGGGTTCAGCACGTGCATTGGCGGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS-3UTR CAA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCGGAGGCCCAGGAGCCTaGTGGGGAAGGGAGCCGGGT +
Preference number: 5 (lower is better)
Translates to: DEHARVETGRGQGRLQLLGGPGA*WGREPG
Trigger: ACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCCTCC...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCATGCCCTCCCAGGGCCTaGCACCGTGCACCTACTGTG +
Preference number: 5 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPCPPRA*HRAPTV
Trigger: CACAGTAGGTGCACGGTGCAAGGCCCTGGGAGGGCA...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCACGCCAGACACTGGGCTaGCCCTTGCTGTCCGTCCCA +
Preference number: 5 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPRQTLG*PLLSVP
Trigger: TGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGGCG...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GCAGAAGTGCGAGCAGCAGCCTCGAGGCGGCGAGGCCTGCGCCAGGTGGGCTCTCAGCCCCGCAGCTCCTaGTGTTCACACCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AEVRAAASRRRGLRQVGSQPRSS*CSHQLP
Trigger: GGGCAGCTGGTGTGAACACAAGGAGCTGCGGGGCTG...AGAGCCCACCTGGCGCAGGCCTCGCCGCCTCGAGGCTGCTGCTCGCACTTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS TCA 90 bp CCTGCAGCGGGAACGTGGCCGCCCGGTTGCCCACGTAGCCGCGGATaGCGTGGCTCTGTATGGAGAGCACCCGGCACTCCTCCTCCATGC +
Preference number: 5 (lower is better)
Translates to: PAAGTWPPGCPRSRG*RGSVWRAPGTPPPC
Trigger: GCATGGAGGAGGAGTGCCGGGTGCTCTCCATACAGAGCCACGTCATCCGCGGCTACGTGGGCAACCGGGCGGCCACGTTCCCGCTGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291565.9
ENST00000398081.5
ENST00000398085.7
ENST00000468090.5
ENST00000470029.5
ENST00000476084.1
CDS CCA 90 bp CGGGGGCCGCAGCGGAAGTGCTTTCAACCTCATCAGTCATCCGGCTaGACCGCAGGAGCTCTCCGACTCCCTTCCCCCTGCCGCCCGCGA +
Preference number: 5 (lower is better)
Translates to: RGPQRKCFQPHQSSG*TAGALRLPSPCRPR
Trigger: TCGCGGGCGGCAGGGGGAAGGGAGTCGGAGAGCTCCTGCGGTCCAGCCGGATGACTGATGAGGTTGAAAGCACTTCCGCTGCGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498040.5
CDS-3UTR CAA 90 bp CCAGCCGGCCAGGGAGTCTGGCCCGGCCTGGCCCCTCGCTGGTGTCCGTCGGCAGTGGAGGCAGAAAGATaGCTTCAGCCCAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PAGQGVWPGLAPRWCPSAVEAER*LQPRRS
Trigger: TGACCTCCTGGGCTGAAGCAATCTTTCTGCCTCCAC...TGCCGACGGACACCAGCGAGGGGCCAGGCCGGGCCAGACTCCCTGGCCGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS GCA 90 bp CCACTGCTGCCAGGAGGGGATTTCCAGGGAACACAAGGGCCGTCCTaGTCTCCGAGCCACCGGGGAGCCGGCTCCGCCAATGCACGTGCT +
Preference number: 5 (lower is better)
Translates to: PLLPGGDFQGTQGPS*SPSHRGAGSANARA
Trigger: AGCACGTGCATTGGCGGAGCCGGCTCCCCGGTGGCTCGGAGAGCAGGACGGCCCTTGTGTTCCCTGGAAATCCCCTCCTGGCAGCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS-3UTR CAA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGCCCCGGCCTGGGCTTTaGCACACTGGATGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPPRPGL*HTGWSS
Trigger: AGAGGACCATCCAGTGTGCAAAAGCCCAGGCCGGGG...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGTTACCCCAGGGGCTTaGGCCTCTTACCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPVTPGA*ASYLVQ
Trigger: CTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAAC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAGTTACCCCAGGGGCTTaGGCCTCTTACCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPVTPGA*ASYLVQ
Trigger: CTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAAC...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGGAAGGGGACATCTCTaGCTCTGGGACAGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPGRGHL*LWDRVL
Trigger: CAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTTCC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS CCA 90 bp CTGCGTGTCACGGGCAAGCGGCGGGGCCCTCACAGCACCGTGGCCTaGACGACGATCTCTGGGTCCTCGATGTCCCTTTTGCTCTGCACC +
Preference number: 5 (lower is better)
Translates to: LRVTGKRRGPHSTVA*TTISGSSMSLLLCT
Trigger: GGTGCAGAGCAAAAGGGACATCGAGGACCCAGAGATCGTCGTCCAGGCCACGGTGCTGTGAGGGCCCCGCCGCTTGCCCGTGACACGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS CCA 90 bp ACGCGCTGCGTGTCACGGGCAAGCGGCGGGGCCCTCACAGCACCGTaGCCTGGACGACGATCTCTGGGTCCTCGATGTCCCTTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: TRCVSRASGGALTAP*PGRRSLGPRCPFCS
Trigger: AGAGCAAAAGGGACATCGAGGACCCAGAGATCGTCGTCCAGGCCACGGTGCTGTGAGGGCCCCGCCGCTTGCCCGTGACACGCAGCGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS-3UTR CAA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCATGCCCCACACCCACCTaGGAAGATTGGCAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPCPTPT*EDWQLP
Trigger: TGGAAGCTGCCAATCTTCCAAGGTGGGTGTGGGGCA...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS TCA 90 bp CCCAGGCGGCAGTGCCTGGCACCCAGCCTCGGCGGCTCCAGAGGCTaGCAGATGAAGGACACGGATATCACCCAGCCAGCGGGAATCTAC +
Preference number: 5 (lower is better)
Translates to: PRRQCLAPSLGGSRG*QMKDTDITQPAGIY
Trigger: GTAGATTCCCGCTGGCTGGGTGATATCCGTGTCCTTCATCTGTCAGCCTCTGGAGCCGCCGAGGCTGGGTGCCAGGCACTGCCGCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS GCA 90 bp CTCCAGCCCCGCAGCTCCTTGTGTTCACACCAGCTGCCCCTTCCCTaGAGCAGGGACCACCAAGCCCAGCAGCAGGGCACCTGTGTGGTT +
Preference number: 5 (lower is better)
Translates to: LQPRSSLCSHQLPLP*SRDHQAQQQGTCVV
Trigger: AACCACACAGGTGCCCTGCTGCTGGGCTTGGTGGTCCCTGCTGCAGGGAAGGGGCAGCTGGTGTGAACACAAGGAGCTGCGGGGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476313.5
CDS CCA 90 bp CAAGCGGCGGGGCCCTCACAGCACCGTGGCCTGGACGACGATCTCTaGGTCCTCGATGTCCCTTTTGCTCTGCACCATCCGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: QAAGPSQHRGLDDDL*VLDVPFALHHPQLQ
Trigger: CTGGAGCTGCGGATGGTGCAGAGCAAAAGGGACATCGAGGACCCAGAGATCGTCGTCCAGGCCACGGTGCTGTGAGGGCCCCGCCGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS-3UTR CAA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCAAAGACGGCGTCCACTTaGCGAATGTCCATCCGGATG +
Preference number: 5 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPKTAST*RMSIRM
Trigger: CATCCGGATGGACATTCGCAAAGTGGACGCCGTCTT...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGGGTCTGCAGACCGACTaGAATTTGCTGGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRGLQTD*NLLGPG
Trigger: CCCAGGCCCCAGCAAATTCAAGTCGGTCTGCAGACC...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGATTCCGGGCAGTGGACTaGGCCTCCCACAGCCACCCT +
Preference number: 5 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRFRAVD*ASHSHP
Trigger: AGGGTGGCTGTGGGAGGCCAAGTCCACTGCCCGGAA...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGGGGCAGGAGAACCACTaGAACCCAGGAAGCGGAGTT +
Preference number: 5 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPGQENH*NPGSGV
Trigger: AACTCCGCTTCCTGGGTTCAAGTGGTTCTCCTGCCC...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGTGCCCGGGCAGTGGCTaGGACACAGCTGTCACGCCA +
Preference number: 5 (lower is better)
Translates to: KGASIHLHGDAGFAGRWACPGSG*DTAVTP
Trigger: TGGCGTGACAGCTGTGTCCAAGCCACTGCCCGGGCA...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCAGGAGAGGCTGGCATTaGGGGGTGCTGTTCCCACCA +
Preference number: 5 (lower is better)
Translates to: DEHARVETGRGQGRLQLLRRGWH*GVLFPP
Trigger: TGGTGGGAACAGCACCCCCAAATGCCAGCCTCTCCT...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCATATGACGGCTCGAGCTaGACACAGGTTCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPYDGSS*TQVLPA
Trigger: AGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCATA...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTGGGCTCTGCAGGCACTaGGGGGATCGGCTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: LLSWARGSKVQVSPGLVPGLCRH*GDRLSH
Trigger: GTGGGAAAGCCGATCCCCCAAGTGCCTGCAGAGCCC...AGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp TGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTGAGGCCTCTGGAGACGTCCAGCACTaGGCCGGGTCTCAGACACAG +
Preference number: 5 (lower is better)
Translates to: WARGSKVQVSPGLVPEASGDVQH*AGSQTQ
Trigger: CTGTGTCTGAGACCCGGCCAAGTGCTGGACGTCTCC...AGAGGCCTCAGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS GCA 90 bp GCACCGTGGCCTGGACGACGATCTCTGGGTCCTCGATGTCCCTTTTaGTCTGCACCATCCGCAGCTCCAGCTGCATGGGGCTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: APWPGRRSLGPRCPF*SAPSAAPAAWGWAS
Trigger: TGAGGCCCAGCCCCATGCAGCTGGAGCTGCGGATGGTGCAGAGCAAAAGGGACATCGAGGACCCAGAGATCGTCGTCCAGGCCACGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS GCA 90 bp GACTTGCTGTGCCCCTGGCCCACTCACAACACCCGACGTGCCCACTaGTGCCAGGAGGGGATTTCCAGGGAACACAAGGGCCGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: DLLCPWPTHNTRRAH*CQEGISREHKGRPA
Trigger: AGCAGGACGGCCCTTGTGTTCCCTGGAAATCCCCTCCTGGCAGCAGTGGGCACGTCGGGTGTTGTGAGTGGGCCAGGGGCACAGCAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS GCA 90 bp GAGGACAGACTTGCTGTGCCCCTGGCCCACTCACAACACCCGACGTaGCCACTGCTGCCAGGAGGGGATTTCCAGGGAACACAAGGGCCG +
Preference number: 5 (lower is better)
Translates to: EDRLAVPLAHSQHPT*PLLPGGDFQGTQGP
Trigger: CGGCCCTTGTGTTCCCTGGAAATCCCCTCCTGGCAGCAGTGGGCACGTCGGGTGTTGTGAGTGGGCCAGGGGCACAGCAAGTCTGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS-3UTR CAA 90 bp GGTGTGGCGGCGCCCTGTAGGGACCAGTGGCTCTGGGCTGCAACGGGCCTGCCATTCTCACAGGCCACCTaGAGGTTATTGGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: GVAAPCRDQWLWAATGLPFSQAT*RLLGCL
Trigger: CAAGCACCCCAATAACCTCAAGGTGGCCTGTGAGAA...TGGCAGGCCCGTTGCAGCCCAGAGCCACTGGTCCCTACAGGGCGCCGCCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTTGGAGAGTCCGCTTCTaGGGGGCCCCATGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSWRVRF*GAPWAP
Trigger: GGGGGCCCATGGGGCCCCCAAGAAGCGGACTCTCCA...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGAGGGTGGGGGTACCCCTaGGAGAGTCCGCTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: IKACSPGHTARNTHCRGRGWGYP*ESPLLG
Trigger: CCCAAGAAGCGGACTCTCCAAGGGGTACCCCCACCC...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAGAGTTTGAGACCAGCTaGGCCAACATGGTGAAACCC +
Preference number: 5 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPEFETS*ANMVKP
Trigger: GGGTTTCACCATGTTGGCCAAGCTGGTCTCAAACTC...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAACACTGGGCTTGCCCTaGCTGTCCGTCCCAGCACTG +
Preference number: 5 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRTLGLP*LSVPAL
Trigger: CAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCTCCCACAGGGAACACCCCCGAGATGGCAAACAGGGGCCCGTCTTCCCGGAGGGCCGCCGTCCTCCCATaGGTCCAGTTTTGCAATCAC +
Preference number: 5 (lower is better)
Translates to: PPTGNTPEMANRGPSSRRAAVLP*VQFCNH
Trigger: GTGATTGCAAAACTGGACCAATGGGAGGACGGCGGC...CCTCCGGGAAGACGGGCCCCTGTTTGCCATCTCGGGGGTGTTCCCTGTGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCCAGCCCCGCAGCTCCTaGTGTTCACACCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GSNSPTVLGTGVQGPGVTQPRSS*CSHQLP
Trigger: GGGCAGCTGGTGTGAACACAAGGAGCTGCGGGGCTG...GGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS GCA 90 bp GGTAGACACGGTCTTCTCACAGGCCACCTGCAGGGAGGACAGACTTaGTGTGCCCCTGGCCCACTCACAACACCCGACGTGCCCACTGCT +
Preference number: 5 (lower is better)
Translates to: GRHGLLTGHLQGGQT*CAPGPLTTPDVPTA
Trigger: AGCAGTGGGCACGTCGGGTGTTGTGAGTGGGCCAGGGGCACAGCAAGTCTGTCCTCCCTGCAGGTGGCCTGTGAGAAGACCGTGTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS CCA 90 bp GCCCTTCCAGTGGGCATAGCCTGCCTGGTGGACGGCTCCTCCCCATaGACTGGCTCAAACCCGAAGGAGATCACTAGGCGCAGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: ALPVGIACLVDGSSP*TGSNPKEITRRSAW
Trigger: CCAAGCACTGCGCCTAGTGATCTCCTTCGGGTTTGAGCCAGTCCATGGGGAGGAGCCGTCCACCAGGCAGGCTATGCCCACTGGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343528.10
CDS-3UTR CAA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGAACCCACCTTGGAAGATaGGCAGCTTCCAGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRTHLGR*AASRVA
Trigger: GGCCACCCTGGAAGCTGCCAATCTTCCAAGGTGGGT...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAATGGAGAGTCCGCTTCTaGGGGGCCCCATGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEWRVRF*GAPWAP
Trigger: GGGGGCCCATGGGGCCCCCAAGAAGCGGACTCTCCA...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCCAGCTGCTCCGTGGTTaGACAGCAGGCAGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVQLLRG*TAGSLG
Trigger: CCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTG...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCGGAAGGGGACATCTCTaGCTCTGGGACAGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSGRGHL*LWDRVL
Trigger: CAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTTCC...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCACACTGGGCTTGCCCTaGCTGTCCGTCCCAGCACTG +
Preference number: 5 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVTLGLP*LSVPAL
Trigger: CAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGT...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GCCCTGGGCTTGCAGACGGCATTGCCTCCCTGTTTCCTCATGGGGCTGTCCCTCATGGTCTTGCACCTCTaGGTGGCCTCCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: ALGLQTALPPCFLMGLSLMVLHL*VASCPL
Trigger: CAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCAT...GAGGGACAGCCCCATGAGGAAACAGGGAGGCAATGCCGTCTGCAAGCCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp TGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCGGAGACGTCCAGCACTaGGCCGGGTCTCAGACACAG +
Preference number: 5 (lower is better)
Translates to: WDVGWAQSPQEPSPTGEGGDVQH*AGSQTQ
Trigger: CTGTGTCTGAGACCCGGCCAAGTGCTGGACGTCTCC...GCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS TCA 90 bp GGCAGTGCCTGGCACCCAGCCTCGGCGGCTCCAGAGGCTGACAGATaGAGGACACGGATATCACCCAGCCAGCGGGAATCTACTACCTGT +
Preference number: 5 (lower is better)
Translates to: GSAWHPASAAPEADR*RTRISPSQRESTTC
Trigger: ACAGGTAGTAGATTCCCGCTGGCTGGGTGATATCCGTGTCCTTCATCTGTCAGCCTCTGGAGCCGCCGAGGCTGGGTGCCAGGCACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS GCA 90 bp ACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAACGCGCTaGGTGTCACGGGCAAGCGGCGGGGCCCTCACAGCACCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: TLHVFTGTNTETPTR*VSRASGGALTAPWP
Trigger: AGGCCACGGTGCTGTGAGGGCCCCGCCGCTTGCCCGTGACACGCAGCGCGTTGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS GCA 90 bp TCGCAACTTCCTCCTGGGAACTTCCTGCGGGGGCCGCAGCGGAAGTaGTTTCAACCTCATCAGTCATCCGGCTGGACCGCAGGAGCTCTC +
Preference number: 5 (lower is better)
Translates to: SQLPPGNFLRGPQRK*FQPHQSSGWTAGAL
Trigger: GAGAGCTCCTGCGGTCCAGCCGGATGACTGATGAGGTTGAAAGCACTTCCGCTGCGGCCCCCGCAGGAAGTTCCCAGGAGGAAGTTGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498040.5
CDS CCA 90 bp CACGTGACCACCCCAGTAACAACCCTGGGCAGGAGGTGGGCGTGCTaGTGCACAACTATAGTCCCAGCCACTCGGGAGGTGGAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: HVTTPVTTLGRRWAC*CTTIVPATREVEAE
Trigger: TTCTGCCTCCACCTCCCGAGTGGCTGGGACTATAGTTGTGCACCAGCACGCCCACCTCCTGCCCAGGGTTGTTACTGGGGTGGTCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTTCCTCGATGTCCCTTTaGCTCTGCACCATCCGCAGC +
Preference number: 5 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSSSMSL*LCTIRS
Trigger: GCTGCGGATGGTGCAGAGCAAAAGGGACATCGAGGA...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCTTCCAGGGTGGCCTCTaGCCCCTGGGCATTTGGTGG +
Preference number: 5 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPFQGGL*PLGIWW
Trigger: CCACCAAATGCCCAGGGGCAAGAGGCCACCCTGGAA...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGGGTGGGGGTACCCCTaGGAGAGTCCGCTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSGWGYP*ESPLLG
Trigger: CCCAAGAAGCGGACTCTCCAAGGGGTACCCCCACCC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCAGCACTGACGGGCAGGACAGACGCCCCAGTCTCCACTaGGCAGTGAGGGTATTTCCA +
Preference number: 5 (lower is better)
Translates to: PDTGLALAVRPSTDGQDRRPSLH*AVRVFP
Trigger: TGGAAATACCCTCACTGCCAAGTGGAGACTGGGGCG...TCTGTCCTGCCCGTCAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTCGCCCCAGTCTCCACTaGGCAGTGAGGGTATTTCCA +
Preference number: 5 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSRPSLH*AVRVFP
Trigger: TGGAAATACCCTCACTGCCAAGTGGAGACTGGGGCG...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CAGGCCCAGCCCAGCGCGACACGGCCTCTGTACGGTAGTGGCAGCCAGGGCCCAAATAAGCAGGCGATGTaGGACCAGTATAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: QAQPSATRPLYGSGSQGPNKQAM*DQYSCH
Trigger: GTGACAGCTATACTGGTCCAACATCGCCTGCTTATT...TGGGCCCTGGCTGCCACTACCGTACAGAGGCCGTGTCGCGCTGGGCTGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGTGCCCTCCCAGGGCCTaGCACCGTGCACCTACTGTG +
Preference number: 5 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKCPPRA*HRAPTV
Trigger: CACAGTAGGTGCACGGTGCAAGGCCCTGGGAGGGCA...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGTGCCCTCCCAGGGCCTaGCACCGTGCACCTACTGTG +
Preference number: 5 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSCPPRA*HRAPTV
Trigger: CACAGTAGGTGCACGGTGCAAGGCCCTGGGAGGGCA...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCGCCAGACACTGGGCTaGCCCTTGCTGTCCGTCCCA +
Preference number: 5 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSRQTLG*PLLSVP
Trigger: TGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGGCG...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGCGCCAGACACTGGGCTaGCCCTTGCTGTCCGTCCCA +
Preference number: 5 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKRQTLG*PLLSVP
Trigger: TGGGACGGACAGCAAGGGCAAGCCCAGTGTCTGGCG...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTAGCCACCCCCGAACCTaGCAGAGGCCGCACTCCCTC +
Preference number: 5 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLSHPRT*QRPHSL
Trigger: GAGGGAGTGCGGCCTCTGCAAGGTTCGGGGGTGGCT...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCTATCGAAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGGCCGGGAGTCTGGCTTaGTGGCCCATCCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PIETEGMVLHLLVASCPLAGSLA*WPIPGR
Trigger: TCTGCCTGGGATGGGCCACAAAGCCAGACTCCCGGC...CAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTTCGATAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp ACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCGTGTGTCTGGCCGGGAGTCTGGCTTaGTGGCCCATCCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: TYRTGAGGSGLNQELVCLAGSLA*WPIPGR
Trigger: TCTGCCTGGGATGGGCCACAAAGCCAGACTCCCGGC...CAGACACACGAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp GGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCACAGAGGGCATGGTCTaGCACCTCTTGGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GSNSPTVLGTGVQGPGVTTEGMV*HLLVAS
Trigger: GGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGT...GGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp GCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGTGGGATGGGAGGACACCAAGCAGCTaGGATCAGGGCCCACCCAGA +
Preference number: 5 (lower is better)
Translates to: AWSCTSWWPPAHCGMWDGRTPSS*DQGPPR
Trigger: TCTGGGTGGGCCCTGATCCAAGCTGCTTGGTGTCCT...CCCATCCCACATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS TCA 90 bp AGCCAGCGGGAATCTACTACCTGTCCATCTGGACGGGATGCACAGTaGCAGGACAGGCTTGCCTCTCCCCACAGGGCAGCTACTGGCCTC +
Preference number: 5 (lower is better)
Translates to: SQRESTTCPSGRDAQ*QDRLASPHRAATGL
Trigger: GAGGCCAGTAGCTGCCCTGTGGGGAGAGGCAAGCCTGTCCTGTCACTGTGCATCCCGTCCAGATGGACAGGTAGTAGATTCCCGCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS GCA 90 bp TGGCAGCAAACAGGTCCCCAGTGCCCACAAAGACGGCGTCCACTTTaGGAATGTCCATCCGGATGCGTTCCATCACCACGGAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: WQQTGPQCPQRRRPL*ECPSGCVPSPRSQR
Trigger: CCGCTGGCTCCGTGGTGATGGAACGCATCCGGATGGACATTCGCAAAGTGGACGCCGTCTTTGTGGGCACTGGGGACCTGTTTGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS GCA 90 bp GTGACCACCCCAGTAACAACCCTGGGCAGGAGGTGGGCGTGCTGGTaGACAACTATAGTCCCAGCCACTCGGGAGGTGGAGGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: VTTPVTTLGRRWACW*TTIVPATREVEAER
Trigger: TCTTTCTGCCTCCACCTCCCGAGTGGCTGGGACTATAGTTGTGCACCAGCACGCCCACCTCCTGCCCAGGGTTGTTACTGGGGTGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS CCA 90 bp TTCAGCTGGAAGCCAGCGCTCTGTGCCGGACCATGCCTCTGGAATTaGCATCTCTGTACAGCAGTGGCTCCCTCCCAGGCACCACCAGGA +
Preference number: 5 (lower is better)
Translates to: FSWKPALCAGPCLWN*HLCTAVAPSQAPPG
Trigger: TCCTGGTGGTGCCTGGGAGGGAGCCACTGCTGTACAGAGATGCCAATTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTCCAGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000438837.1
ENST00000476313.5
CDS-3UTR CAA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCCCTTCGCCGTCCCACTaGTCACCCAAGACTGGATCA +
Preference number: 5 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVPSPSH*SPKTGS
Trigger: TGATCCAGTCTTGGGTGACAAGTGGGACGGCGAAGG...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp AAAGGCGCTTCCATCCACCTTCACGGAGATGCTGGCTTCGCAGGCCGGTGGGCGAAGACGGCGTCCACTTaGCGAATGTCCATCCGGATG +
Preference number: 5 (lower is better)
Translates to: KGASIHLHGDAGFAGRWAKTAST*RMSIRM
Trigger: CATCCGGATGGACATTCGCAAAGTGGACGCCGTCTT...CGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAAGGTGGATGGAAGCGCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCGCCACCTTGAGGTTATaGGGGTGCTTGTGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSATLRL*GCLCVH
Trigger: GTGGACACACAAGCACCCCAATAACCTCAAGGTGGC...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCGGTCTGCAGACCGACTaGAATTTGCTGGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPGLQTD*NLLGPG
Trigger: CCCAGGCCCCAGCAAATTCAAGTCGGTCTGCAGACC...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCAGCTGCTCCGTGGTTTGACAGCAGGCAGTCTGGGGAGGGGATGCCGGACTCTGCTTCAAAGCTGCTCTaGGCCCAGCACAGACCTTAC +
Preference number: 5 (lower is better)
Translates to: PAAPWFDSRQSGEGMPDSASKLL*AQHRPY
Trigger: GTAAGGTCTGTGCTGGGCCAAGAGCAGCTTTGAAGC...AGAGTCCGGCATCCCCTCCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp AGTCTGGGGAGGGGATGCCGGACTCTGCCCGTAGAGGCTGACAATTTCCACAAAGGGTGGGGGTACCCCTaGGAGAGTCCGCTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SLGRGCRTLPVEADNFHKGWGYP*ESPLLG
Trigger: CCCAAGAAGCGGACTCTCCAAGGGGTACCCCCACCC...TTTGTGGAAATTGTCAGCCTCTACGGGCAGAGTCCGGCATCCCCTCCCCAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTACACTGGGCTTGCCCTaGCTGTCCGTCCCAGCACTG +
Preference number: 5 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSTLGLP*LSVPAL
Trigger: CAGTGCTGGGACGGACAGCAAGGGCAAGCCCAGTGT...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GCTCCAGGAAATCCTCTCAAAGGGGCCACTGGGAATACTGGCCACAAGGTGGAGGGGCTCTGCAGGCACTaGGGGGATCGGCTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: APGNPLKGATGNTGHKVEGLCRH*GDRLSH
Trigger: GTGGGAAAGCCGATCCCCCAAGTGCCTGCAGAGCCC...CTCCACCTTGTGGCCAGTATTCCCAGTGGCCCCTTTGAGAGGATTTCCTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000398081.5
CDS-3UTR CAA 90 bp CCTGCCCACTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAAACAGAGGGCATGGTCTaGCACCTCTTGGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PAHCGMWDGPRAHKNLLQTEGMV*HLLVAS
Trigger: GGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGT...TTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp AAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGGGAGACGTCCAGCACTaGGCCGGGTCTCAGACACAG +
Preference number: 5 (lower is better)
Translates to: KQRAWSCTSWWPPAHCGMGDVQH*AGSQTQ
Trigger: CTGTGTCTGAGACCCGGCCAAGTGCTGGACGTCTCC...CATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS GCA 90 bp CAGTGCCCACAAAGACGGCGTCCACTTTGCGAATGTCCATCCGGATaGGTTCCATCACCACGGAGCCAGCGGGATTCCTCCTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: QCPQRRRPLCECPSG*VPSPRSQRDSSSSD
Trigger: GTCAGAGGAGGAGGAATCCCGCTGGCTCCGTGGTGATGGAACGCATCCGGATGGACATTCGCAAAGTGGACGCCGTCTTTGTGGGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS GCA 90 bp GCTTGTGTGTCCACGCCAGGAGCATGGCAGCAAACAGGTCCCCAGTaGCCACAAAGACGGCGTCCACTTTGCGAATGTCCATCCGGATGC +
Preference number: 5 (lower is better)
Translates to: ACVSTPGAWQQTGPQ*PQRRRPLCECPSGC
Trigger: GCATCCGGATGGACATTCGCAAAGTGGACGCCGTCTTTGTGGGCACTGGGGACCTGTTTGCTGCCATGCTCCTGGCGTGGACACACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS GCA 90 bp CTCACTCCTTCCCCGGCCTGGGCTTTTGCACACTGGATGGTCCTCTaGAGAACGTGGTGCAAGGTAGACACGGTCTTCTCACAGGCCACC +
Preference number: 5 (lower is better)
Translates to: LTPSPAWAFAHWMVL*RTWCKVDTVFSQAT
Trigger: GGTGGCCTGTGAGAAGACCGTGTCTACCTTGCACCACGTTCTGCAGAGGACCATCCAGTGTGCAAAAGCCCAGGCCGGGGAAGGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS GCA 90 bp CAAGGTCCAGGACGGGAGCCTGGGACCCCAGAGAAAGGTATCTCCTaGTGTTACACATGTCCTTCAGCTGGAAGCCAGCGCTCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: QGPGREPGTPEKGIS*CYTCPSAGSQRSVP
Trigger: CGGCACAGAGCGCTGGCTTCCAGCTGAAGGACATGTGTAACAGCAGGAGATACCTTTCTCTGGGGTCCCAGGCTCCCGTCCTGGACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000476313.5
CDS GCA 90 bp TGCAGAACGTGGTGCAAGGTAGACACGGTCTTCTCACAGGCCACCTaGAGGGAGGACAGACTTGCTGTGCCCCTGGCCCACTCACAACAC +
Preference number: 5 (lower is better)
Translates to: CRTWCKVDTVFSQAT*REDRLAVPLAHSQH
Trigger: GTGTTGTGAGTGGGCCAGGGGCACAGCAAGTCTGTCCTCCCTGCAGGTGGCCTGTGAGAAGACCGTGTCTACCTTGCACCACGTTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS GCA 90 bp ATCACCCAGCCAGCGGGAATCTACTACCTGTCCATCTGGACGGGATaGACAGTGACAGGACAGGCTTGCCTCTCCCCACAGGGCAGCTAC +
Preference number: 5 (lower is better)
Translates to: ITQPAGIYYLSIWTG*TVTGQACLSPQGSY
Trigger: GTAGCTGCCCTGTGGGGAGAGGCAAGCCTGTCCTGTCACTGTGCATCCCGTCCAGATGGACAGGTAGTAGATTCCCGCTGGCTGGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS CCA 90 bp ATGTCCTTCAGCTGGAAGCCAGCGCTCTGTGCCGGACCATGCCTCTaGAATTGGCATCTCTGTACAGCAGTGGCTCCCTCCCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: MSFSWKPALCAGPCL*NWHLCTAVAPSQAP
Trigger: TGGTGCCTGGGAGGGAGCCACTGCTGTACAGAGATGCCAATTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTCCAGCTGAAGGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000438837.1
ENST00000476313.5
CDS CCA 90 bp AGTCCAGGCCAGTGGGATGGCTTAGAAAGGGTCGCAACTTCCTCCTaGGAACTTCCTGCGGGGGCCGCAGCGGAAGTGCTTTCAACCTCA +
Preference number: 5 (lower is better)
Translates to: SPGQWDGLERVATSS*ELPAGAAAEVLSTS
Trigger: TGAGGTTGAAAGCACTTCCGCTGCGGCCCCCGCAGGAAGTTCCCAGGAGGAAGTTGCGACCCTTTCTAAGCCATCCCACTGGCCTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498040.5
CDS-3UTR CAA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCTCGGCCTCAAACTGGTaGGGCGTGATAATGTCTGCA +
Preference number: 5 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSSASNW*GVIMSA
Trigger: TGCAGACATTATCACGCCCAACCAGTTTGAGGCCGA...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGCCCCGGCCTGGGCTTTaGCACACTGGATGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: GALASYLVQATLLPGDLKPRPGL*HTGWSS
Trigger: AGAGGACCATCCAGTGTGCAAAAGCCCAGGCCGGGG...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTCCCCGGCCTGGGCTTTaGCACACTGGATGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLPRPGL*HTGWSS
Trigger: AGAGGACCATCCAGTGTGCAAAAGCCCAGGCCGGGG...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAATTCCAGGGTGGCCTCTaGCCCCTGGGCATTTGGTGG +
Preference number: 5 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEFQGGL*PLGIWW
Trigger: CCACCAAATGCCCAGGGGCAAGAGGCCACCCTGGAA...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCCAGCTGCTCCGTGGTTaGACAGCAGGCAGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRQLLRG*TAGSLG
Trigger: CCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTG...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GCAGTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTGGAAGGGGACATCTCTaGCTCTGGGACAGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: AVPRSCGGSPSRSLGRHSGRGHL*LWDRVL
Trigger: CAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTTCC...AGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACTGCAGGGGCAGATATGACGGCTCGAGCTaGACACAGGTTCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: IKACSPGHTARNTHCRGRYDGSS*TQVLPA
Trigger: AGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCATA...TCTGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCTGACACTGCGTTCTCATGCTGGGTTTTTCACCAGCTCACAGGACAGAGAGACAGCCACCCCCGAACCTaGCAGAGGCCGCACTCCCTC +
Preference number: 5 (lower is better)
Translates to: PDTAFSCWVFHQLTGQRDSHPRT*QRPHSL
Trigger: GAGGGAGTGCGGCCTCTGCAAGGTTCGGGGGTGGCT...GTCTCTCTGTCCTGTGAGCTGGTGAAAAACCCAGCATGAGAACGCAGTGTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAACAGGGGAGGGCGTGGAGGCAGAAAGATaGCTTCAGCCCAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: WDVGWAQSPQEPSPTGEGVEAER*LQPRRS
Trigger: TGACCTCCTGGGCTGAAGCAATCTTTCTGCCTCCAC...GCCCTCCCCTGTTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS GCA 90 bp GTCTGTACCGACAAGCACTCTCCGTACACCAGCCTGGGGTTCTGCTaGTTCAGCTCCTGCACAATGTCCACCACCATGGCCAGGAACGAC +
Preference number: 5 (lower is better)
Translates to: VCTDKHSPYTSLGFC*FSSCTMSTTMARND
Trigger: GTCGTTCCTGGCCATGGTGGTGGACATTGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCTGGTGTACGGAGAGTGCTTGTCGGTACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470029.5
CDS CCA 90 bp GACACGGATATCACCCAGCCAGCGGGAATCTACTACCTGTCCATCTaGACGGGATGCACAGTGACAGGACAGGCTTGCCTCTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: DTDITQPAGIYYLSI*TGCTVTGQACLSPQ
Trigger: CTGTGGGGAGAGGCAAGCCTGTCCTGTCACTGTGCATCCCGTCCAGATGGACAGGTAGTAGATTCCCGCTGGCTGGGTGATATCCGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS-3UTR CAA 90 bp CGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCCGTCATATTTATTCATGTaGTTCAGCCTCAGGCCTTCG +
Preference number: 5 (lower is better)
Translates to: RTCPGGNGPWTGQAPAAPSYLFM*FSLRPS
Trigger: CGAAGGCCTGAGGCTGAACAACATGAATAAATATGA...CGGAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCGCCACCTTGAGGTTATaGGGGTGCTTGTGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPATLRL*GCLCVH
Trigger: GTGGACACACAAGCACCCCAATAACCTCAAGGTGGC...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTACCCACCTTGGAAGATaGGCAGCTTCCAGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLTHLGR*AASRVA
Trigger: GGCCACCCTGGAAGCTGCCAATCTTCCAAGGTGGGT...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GTATCTTTAACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCGCCGGGAGTCTGGCTTaGTGGCCCATCCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: VSLTYRTGAGGSGLNQELAGSLA*WPIPGR
Trigger: TCTGCCTGGGATGGGCCACAAAGCCAGACTCCCGGC...GAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGTTAAAGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp GCAGATATTCAGGGCGAAACAGTGAAAGGGAGGCAGTGCGTCACAGGCGTAATCCAGCCCCGCAGCTCCTaGTGTTCACACCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: ADIQGETVKGRQCVTGVIQPRSS*CSHQLP
Trigger: GGGCAGCTGGTGTGAACACAAGGAGCTGCGGGGCTG...GATTACGCCTGTGACGCACTGCCTCCCTTTCACTGTTTCGCCCTGAATATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS TCA 90 bp GCTCCTTCCAGATTGAATGCTGGACCCTCGAAGGATATGTTTAACTaGAACCTGCAGCGGGAACGTGGCCGCCCGGTTGCCCACGTAGCC +
Preference number: 5 (lower is better)
Translates to: APSRLNAGPSKDMFN*NLQRERGRPVAHVA
Trigger: GGCTACGTGGGCAACCGGGCGGCCACGTTCCCGCTGCAGGTTTCAGTTAAACATATCCTTCGAGGGTCCAGCATTCAATCTGGAAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS GCA 90 bp GGATCACACACGTACACCAGCCTGGGGTTCTGCTGCTTCAGCTCCTaGACAATGTCCACCACCATGGCCAGGAACGACTTGTCCCTCGTA +
Preference number: 5 (lower is better)
Translates to: GSHTYTSLGFCCFSS*TMSTTMARNDLSLV
Trigger: TACGAGGGACAAGTCGTTCCTGGCCATGGTGGTGGACATTGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCTGGTGTACGTGTGTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000472777.5
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS GCA 90 bp TCACCCAAGACTGGATCACACACGTACACCAGCCTGGGGTTCTGCTaGTTCAGCTCCTGCACAATGTCCACCACCATGGCCAGGAACGAC +
Preference number: 5 (lower is better)
Translates to: SPKTGSHTYTSLGFC*FSSCTMSTTMARND
Trigger: GTCGTTCCTGGCCATGGTGGTGGACATTGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCTGGTGTACGTGTGTGATCCAGTCTTGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000472777.5
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS GCA 90 bp TTACACATGTCCTTCAGCTGGAAGCCAGCGCTCTGTGCCGGACCATaGCTCTGGAATTGGCATCTCTGTACAGCAGTGGCTCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LHMSFSWKPALCAGP*LWNWHLCTAVAPSQ
Trigger: CTGGGAGGGAGCCACTGCTGTACAGAGATGCCAATTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTCCAGCTGAAGGACATGTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000438837.1
ENST00000476313.5
CDS GCA 90 bp AAGCACTCTCCGTACACCAGCCTGGGGTTCTGCTGCTTCAGCTCCTaGACAATGTCCACCACCATGGCCAGGAACGACTTGTCCCTCGTA +
Preference number: 5 (lower is better)
Translates to: KHSPYTSLGFCCFSS*TMSTTMARNDLSLV
Trigger: TACGAGGGACAAGTCGTTCCTGGCCATGGTGGTGGACATTGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCTGGTGTACGGAGAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470029.5
CDS CCA 90 bp ATAGAGTGCAGCATGTCCATCACCCGCAAGGCTTCCTCCTGGCTGTaGATCTTCCGGCCACTCAGTAACTCGGCCTCAAACTGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: IECSMSITRKASSWL*IFRPLSNSASNWLG
Trigger: GCCCAACCAGTTTGAGGCCGAGTTACTGAGTGGCCGGAAGATCCACAGCCAGGAGGAAGCCTTGCGGGTGATGGACATGCTGCACTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS CCA 90 bp TCTCCTGCCGAGAGAGAAAGCCAGTCAGATGGCTACACTCTGCCCTaGGGGGTCAAAATAATCCCAGCAGAGTCCAGGCCAGTGGGATGG +
Preference number: 5 (lower is better)
Translates to: SPAERESQSDGYTLP*GVKIIPAESRPVGW
Trigger: CCATCCCACTGGCCTGGACTCTGCTGGGATTATTTTGACCCCCCAGGGCAGAGTGTAGCCATCTGACTGGCTTTCTCTCTCGGCAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000498040.5
CDS-3UTR CAA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGAGGTTATTGGGGTGCTaGTGTGTCCACGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: GALASYLVQATLLPGDLKRLLGC*CVHARS
Trigger: GCTCCTGGCGTGGACACACAAGCACCCCAATAACCT...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCAGGTTATTGGGGTGCTaGTGTGTCCACGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRRLLGC*CVHARS
Trigger: GCTCCTGGCGTGGACACACAAGCACCCCAATAACCT...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGTCCTCGATGTCCCTTTaGCTCTGCACCATCCGCAGC +
Preference number: 5 (lower is better)
Translates to: GALASYLVQATLLPGDLKSSMSL*LCTIRS
Trigger: GCTGCGGATGGTGCAGAGCAAAAGGGACATCGAGGA...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTGGAGGCCCAGGAGCCTaGTGGGGAAGGGAGCCGGGT +
Preference number: 5 (lower is better)
Translates to: FSDTRHERPELNHIAFIVGGPGA*WGREPG
Trigger: ACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCCTCC...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCGGTCTGCAGACCGACTaGAATTTGCTGGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SKNQESKLARQGTPPVTPGLQTD*NLLGPG
Trigger: CCCAGGCCCCAGCAAATTCAAGTCGGTCTGCAGACC...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCACCCACCTTGGAAGATaGGCAGCTTCCAGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SKNQESKLARQGTPPVTPTHLGR*AASRVA
Trigger: GGCCACCCTGGAAGCTGCCAATCTTCCAAGGTGGGT...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCACCAAGAATCAAAGCTaGCTCGCCAGGGCACACCGC +
Preference number: 5 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRTKNQS*LARAHR
Trigger: GCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGT...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCAATAAGCAGGCGATGTaGGACCAGTATAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSNKQAM*DQYSCH
Trigger: GTGACAGCTATACTGGTCCAACATCGCCTGCTTATT...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GACGAACATGCCCGGGTGGAAACGGGCCGTGGACAGGGCAGGCTCCAGCTGCTCATGCACATAATAACCTaGGCAGGACTAGGCAACAAT +
Preference number: 5 (lower is better)
Translates to: DEHARVETGRGQGRLQLLMHIIT*AGLGNN
Trigger: ATTGTTGCCTAGTCCTGCCAAGGTTATTATGTGCAT...GAGCAGCTGGAGCCTGCCCTGTCCACGGCCCGTTTCCACCCGGGCATGTTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCGTTACCCCAGGGGCTTaGGCCTCTTACCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LKEPRIKACSPGHTARNTVTPGA*ASYLVQ
Trigger: CTGCACCAGGTAAGAGGCCAAAGCCCCTGGGGTAAC...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTTGCCCGGGCAGTGGCTaGGACACAGCTGTCACGCCA +
Preference number: 5 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLACPGSG*DTAVTP
Trigger: TGGCGTGACAGCTGTGTCCAAGCCACTGCCCGGGCA...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCAGGAGAGGCTGGCATTaGGGGGTGCTGTTCCCACCA +
Preference number: 5 (lower is better)
Translates to: SKNQESKLARQGTPPVTPRRGWH*GVLFPP
Trigger: TGGTGGGAACAGCACCCCCAAATGCCAGCCTCTCCT...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTGGGCTCTGCAGGCACTaGGGGGATCGGCTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: HKNLLQQGRALGSCVQLIGLCRH*GDRLSH
Trigger: GTGGGAAAGCCGATCCCCCAAGTGCCTGCAGAGCCC...AATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS GCA 90 bp TCTCCTGCTGTTACACATGTCCTTCAGCTGGAAGCCAGCGCTCTGTaGCGGACCATGCCTCTGGAATTGGCATCTCTGTACAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SPAVTHVLQLEASAL*RTMPLELASLYSSG
Trigger: GCCACTGCTGTACAGAGATGCCAATTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTCCAGCTGAAGGACATGTGTAACAGCAGGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000476313.5
CDS-3UTR CAA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGTCGGCCTCAAACTGGTaGGGCGTGATAATGTCTGCA +
Preference number: 5 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSSASNW*GVIMSA
Trigger: TGCAGACATTATCACGCCCAACCAGTTTGAGGCCGA...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAGGAGGCCCAGGAGCCTaGTGGGGAAGGGAGCCGGGT +
Preference number: 5 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRGGPGA*WGREPG
Trigger: ACCCGGCTCCCTTCCCCACAAGGCTCCTGGGCCTCC...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCTGCCCCACACCCACCTaGGAAGATTGGCAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SKNQESKLARQGTPPVTPCPTPT*EDWQLP
Trigger: TGGAAGCTGCCAATCTTCCAAGGTGGGTGTGGGGCA...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCCCATCACCAAGAAGGGGCTTCAGACACCTCATGGGGACCTATGACGGCTCGGAGTTTGAGACCAGCTaGGCCAACATGGTGAAACCC +
Preference number: 5 (lower is better)
Translates to: LPSPRRGFRHLMGTYDGSEFETS*ANMVKP
Trigger: GGGTTTCACCATGTTGGCCAAGCTGGTCTCAAACTC...CGAGCCGTCATAGGTCCCCATGAGGTGTCTGAAGCCCCTTCTTGGTGATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTTATGACGGCTCGAGCTaGACACAGGTTCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLYDGSS*TQVLPA
Trigger: AGCTGGGAGAACCTGTGTCAAGCTCGAGCCGTCATA...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCGCCGCCGTCCTCCCATaGGTCCAGTTTTGCAATCAC +
Preference number: 5 (lower is better)
Translates to: LKEPRIKACSPGHTARNTAAVLP*VQFCNH
Trigger: GTGATTGCAAAACTGGACCAATGGGAGGACGGCGGC...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCCGCCGCCGTCCTCCCATaGGTCCAGTTTTGCAATCAC +
Preference number: 5 (lower is better)
Translates to: SKNQESKLARQGTPPVTPAAVLP*VQFCNH
Trigger: GTGATTGCAAAACTGGACCAATGGGAGGACGGCGGC...GGGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAGGGCTGGTTCCTGAGGCCTCTTTGTCTCTGTGTGGTTaGAAAACTGGACAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: WARGSKVQVSPGLVPEASLSLCG*KTGQSS
Trigger: TGAACTCTGTCCAGTTTTCAAACCACACAGAGACAA...AGAGGCCTCAGGAACCAGCCCTGGTGACACCTGGACCTTGGACCCCCGTGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp GGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCAAAAATGAACGCACCTaGTGGTACGGCCTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: GSNSPTVLGTGVQGPGVTKNERT*WYGLKE
Trigger: TTCCTTGAGGCCGTACCACAAGGTGCGTTCATTTTT...GGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS CCA 90 bp GACCCCAGAGAAAGGTATCTCCTGCTGTTACACATGTCCTTCAGCTaGAAGCCAGCGCTCTGTGCCGGACCATGCCTCTGGAATTGGCAT +
Preference number: 5 (lower is better)
Translates to: DPRERYLLLLHMSFS*KPALCAGPCLWNWH
Trigger: ATGCCAATTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTCCAGCTGAAGGACATGTGTAACAGCAGGAGATACCTTTCTCTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000476313.5
CDS CCA 90 bp CGGGACGTACATCGAGCCTTCGCCGTCCCACTTGTCACCCAAGACTaGATCACACACTGCAGAGACACAAGGGCATCTTATCAGCAAAGG +
Preference number: 5 (lower is better)
Translates to: RDVHRAFAVPLVTQD*ITHCRDTRASYQQR
Trigger: CCTTTGCTGATAAGATGCCCTTGTGTCTCTGCAGTGTGTGATCCAGTCTTGGGTGACAAGTGGGACGGCGAAGGCTCGATGTACGTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468392.5
CDS CCA 90 bp TACTGGCCTCAGACGTGCTTGGGACAATCTCTGCACAGCCCAGTTTaGAGACTCACAGCTGTGCTGCTCCCCTCACTTCCAAAAAGGACG +
Preference number: 5 (lower is better)
Translates to: YWPQTCLGQSLHSPV*RLTAVLLPSLPKRT
Trigger: CGTCCTTTTTGGAAGTGAGGGGAGCAGCACAGCTGTGAGTCTCCAAACTGGGCTGTGCAGAGATTGTCCCAAGCACGTCTGAGGCCAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS-3UTR CAA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTTTCTCACAGGCCACCTaGAGGTTATTGGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLFSQAT*RLLGCL
Trigger: CAAGCACCCCAATAACCTCAAGGTGGCCTGTGAGAA...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTTTCCGGGCAGTGGACTaGGCCTCCCACAGCCACCCT +
Preference number: 5 (lower is better)
Translates to: FSDTRHERPELNHIAFIVFRAVD*ASHSHP
Trigger: AGGGTGGCTGTGGGAGGCCAAGTCCACTGCCCGGAA...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp AAACAGAGGGCATGGTCTTGCACCTCTTGGTGGCCTCCTGCCCACTGTGGGATGACCATGCCTCTGGAATaGGCATCTCTGTACAGCAGT +
Preference number: 5 (lower is better)
Translates to: KQRAWSCTSWWPPAHCGMTMPLE*ASLYSS
Trigger: ACTGCTGTACAGAGATGCCAATTCCAGAGGCATGGT...CATCCCACAGTGGGCAGGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CAA 90 bp CCTGCCCACTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAAAAAAATGAACGCACCTaGTGGTACGGCCTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: PAHCGMWDGPRAHKNLLQKNERT*WYGLKE
Trigger: TTCCTTGAGGCCGTACCACAAGGTGCGTTCATTTTT...TTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp CACAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTAGGACACCAAGCAGCTaGGATCAGGGCCCACCCAGA +
Preference number: 5 (lower is better)
Translates to: HKNLLQQGRALGSCVQLIRTPSS*DQGPPR
Trigger: TCTGGGTGGGCCCTGATCCAAGCTGCTTGGTGTCCT...AATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTTTCCAGGGTGGCCTCTaGCCCCTGGGCATTTGGTGG +
Preference number: 5 (lower is better)
Translates to: FSDTRHERPELNHIAFIVFQGGL*PLGIWW
Trigger: CCACCAAATGCCCAGGGGCAAGAGGCCACCCTGGAA...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGAAGAGAAGTTTCAGATaGCGCCAGAGAGCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKKRSFR*RQRAQD
Trigger: ATCCTGAGCTCTCTGGCGCAATCTGAAACTTCTCTT...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCTGTTCCCACCCACCTATCCGCCAGACACTGGGCTTGCCCTTGCTGTCCGTCATGCACATAATAACCTaGGCAGGACTAGGCAACAAT +
Preference number: 5 (lower is better)
Translates to: LCSHPPIRQTLGLPLLSVMHIIT*AGLGNN
Trigger: ATTGTTGCCTAGTCCTGCCAAGGTTATTATGTGCAT...GACGGACAGCAAGGGCAAGCCCAGTGTCTGGCGGATAGGTGGGTGGGAACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCAAAGAACCAAGAATCAAAGCTTGCTCGCCAGGGCACACCGCCCGTAACACCGTGCAGGCAACTCTCTaGCCTGGTGATCTCAAGATG +
Preference number: 5 (lower is better)
Translates to: LKEPRIKACSPGHTARNTVQATL*PGDLKM
Trigger: CATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCAC...GGTGTTACGGGCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGTTCTTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TACAGGGTGCCATCGGGAAGGACTGCAGCCAGGCGGCTCCAATTCTCCTACTGTAAAAATGAACGCACCTaGTGGTACGGCCTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: YRVPSGRTAARRLQFSYCKNERT*WYGLKE
Trigger: TTCCTTGAGGCCGTACCACAAGGTGCGTTCATTTTT...ACAGTAGGAGAATTGGAGCCGCCTGGCTGCAGTCCTTCCCGATGGCACCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp GCTCGTGTGTCTGTCCACAGTCCAGTGCTTCGAAGGAATGTCTTTCTCCTTGAAACAGAGGGCATGGTCTaGCACCTCTTGGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ARVSVHSPVLRRNVFLLETEGMV*HLLVAS
Trigger: GGAGGCCACCAAGAGGTGCAAGACCATGCCCTCTGT...TTCAAGGAGAAAGACATTCCTTCGAAGCACTGGACTGTGGACAGACACACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp GGCTCCAATTCTCCTACTGTCCTGGGCACGGGGGTCCAAGGTCCAGGTGTCACCGCTTTCCACAACTTATaGTCCCATATTTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: GSNSPTVLGTGVQGPGVTAFHNL*SHIFMA
Trigger: GGCCATGAAAATATGGGACAATAAGTTGTGGAAAGC...GGTGACACCTGGACCTTGGACCCCCGTGCCCAGGACAGTAGGAGAATTGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS GCA 90 bp ACCTGGCAGAAAACAGCTGGGGAGAACAGCTCTGAAGCCCAGACGTaGAGATGGTCCAGTCGCAACAAATCTGTGCTACACTCACAAGGA +
Preference number: 5 (lower is better)
Translates to: TWQKTAGENSSEAQT*RWSSRNKSVLHSQG
Trigger: TCCTTGTGAGTGTAGCACAGATTTGTTGCGACTGGACCATCTGCACGTCTGGGCTTCAGAGCTGTTCTCCCCAGCTGTTTTCTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438837.1
CDS GCA 90 bp GCTTGGGACAATCTCTGCACAGCCCAGTTTGGAGACTCACAGCTGTaGTGCTCCCCTCACTTCCAAAAAGGACGTCTTGACGTCATCAAC +
Preference number: 5 (lower is better)
Translates to: AWDNLCTAQFGDSQL*CSPHFQKGRLDVIN
Trigger: GTTGATGACGTCAAGACGTCCTTTTTGGAAGTGAGGGGAGCAGCACAGCTGTGAGTCTCCAAACTGGGCTGTGCAGAGATTGTCCCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS CCA 90 bp GCCTGGGCGACAGAGACCGACCTTGTCTCTGTGTGGTTTGAAAACTaGACAGAGTTCACCGCGTCAATCTCAAATCCCAAAACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AWATETDLVSVWFEN*TEFTASISNPKTCS
Trigger: GCTGCAGGTTTTGGGATTTGAGATTGACGCGGTGAACTCTGTCCAGTTTTCAAACCACACAGAGACAAGGTCGGTCTCTGTCGCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398081.5
CDS-3UTR CAA 90 bp GTACCCAGGTCGTGTGGGGGATCCCCAAGCAGAAGCTTAGGACGGCATTCTCCCTCATATTTATTCATGTaGTTCAGCCTCAGGCCTTCG +
Preference number: 5 (lower is better)
Translates to: VPRSCGGSPSRSLGRHSPSYLFM*FSLRPS
Trigger: CGAAGGCCTGAGGCTGAACAACATGAATAAATATGA...GGGAGAATGCCGTCCTAAGCTTCTGCTTGGGGATCCCCCACACGACCTGGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTAAGAGAAGTTTCAGATaGCGCCAGAGAGCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLKRSFR*RQRAQD
Trigger: ATCCTGAGCTCTCTGGCGCAATCTGAAACTTCTCTT...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TCTACAAATGCTGTGGCTCAATGTGCTGTCACGGGCAGCACGTGGCAAACGCGCAAGAGAAGTTTCAGATaGCGCCAGAGAGCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: STNAVAQCAVTGSTWQTRKRSFR*RQRAQD
Trigger: ATCCTGAGCTCTCTGGCGCAATCTGAAACTTCTCTT...GCGCGTTTGCCACGTGCTGCCCGTGACAGCACATTGAGCCACAGCATTTGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTCGGCCCTGGTGATCAGCATCCATCTGAGTGCTCGGTGGACGGACACGGGAGCTTAAAAAGGATCCTATaGTGGAATTCATCCTTACGG +
Preference number: 5 (lower is better)
Translates to: LGPGDQHPSECSVDGHGSLKRIL*WNSSLR
Trigger: CCGTAAGGATGAATTCCACAATAGGATCCTTTTTAA...GCTCCCGTGTCCGTCCACCGAGCACTCAGATGGATGCTGATCACCAGGGCCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAAGGAGAGGCTGGCATTaGGGGGTGCTGTTCCCACCA +
Preference number: 5 (lower is better)
Translates to: MALRQTLHVFTGTNTETPRRGWH*GVLFPP
Trigger: TGGTGGGAACAGCACCCCCAAATGCCAGCCTCTCCT...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGAGCCACCCCCGAACCTaGCAGAGGCCGCACTCCCTC +
Preference number: 5 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQSHPRT*QRPHSL
Trigger: GAGGGAGTGCGGCCTCTGCAAGGTTCGGGGGTGGCT...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCTGCCCACTGTGGGATGTGGGATGGGCCCAGAGCCCACAAGAACCTTCTCCAAGCTTTCCACAACTTATaGTCCCATATTTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: PAHCGMWDGPRAHKNLLQAFHNL*SHIFMA
Trigger: GGCCATGAAAATATGGGACAATAAGTTGTGGAAAGC...TTGGAGAAGGTTCTTGTGGGCTCTGGGCCCATCCCACATCCCACAGTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS GCA 90 bp TGGGACAATCTCTGCACAGCCCAGTTTGGAGACTCACAGCTGTGCTaGTCCCCTCACTTCCAAAAAGGACGTCTTGACGTCATCAACTTC +
Preference number: 5 (lower is better)
Translates to: WDNLCTAQFGDSQLC*SPHFQKGRLDVINF
Trigger: GAAGTTGATGACGTCAAGACGTCCTTTTTGGAAGTGAGGGGAGCAGCACAGCTGTGAGTCTCCAAACTGGGCTGTGCAGAGATTGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS CCA 90 bp GCCTGGGCGACAGAGACCGACCTTGTCTCTGTGTGGTTTGAAAACTaGACAGAGTTCACCGCGTCAATCTCAAATCCCAAAACCGACTGT +
Preference number: 5 (lower is better)
Translates to: AWATETDLVSVWFEN*TEFTASISNPKTDC
Trigger: ACAGTCGGTTTTGGGATTTGAGATTGACGCGGTGAACTCTGTCCAGTTTTCAAACCACACAGAGACAAGGTCGGTCTCTGTCGCCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS CCA 90 bp GCCTGGGCGACAGAGACCGACCTTGTCTCTGTGTGGTTTGAAAACTaGACAGAGTTCACCGCGTCAATCTCAAATCCCAAAACCTGCAAG +
Preference number: 5 (lower is better)
Translates to: AWATETDLVSVWFEN*TEFTASISNPKTCK
Trigger: CTTGCAGGTTTTGGGATTTGAGATTGACGCGGTGAACTCTGTCCAGTTTTCAAACCACACAGAGACAAGGTCGGTCTCTGTCGCCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621478.1
CDS-3UTR CAA 90 bp ATGGCTCTAAGGCAGACGTTACATGTTTTCACAGGGACAAACACGGAGACACCAACCAAGAATCAAAGCTaGCTCGCCAGGGCACACCGC +
Preference number: 5 (lower is better)
Translates to: MALRQTLHVFTGTNTETPTKNQS*LARAHR
Trigger: GCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGT...TGGTGTCTCCGTGTTTGTCCCTGTGAAAACATGTAACGTCTGCCTTAGAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ATTTGCTGGGGCCTGGGAAGGTCCCTGATGCTGCACCGTGTGTCTCCAAGCAAGATGCACATAATAACCTaGGCAGGACTAGGCAACAAT +
Preference number: 5 (lower is better)
Translates to: ICWGLGRSLMLHRVSPSKMHIIT*AGLGNN
Trigger: ATTGTTGCCTAGTCCTGCCAAGGTTATTATGTGCAT...CTTGCTTGGAGACACACGGTGCAGCATCAGGGACCTTCCCAGGCCCCAGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp AAGGGGACATCTCTTGCTCTGGGACAGGGTCCTGCTTGGCTCAGACAGTGGGAAGAAATGGGTTTCCTGTaGGACAAAGACCAGAAATGG +
Preference number: 5 (lower is better)
Translates to: KGTSLALGQGPAWLRQWEEMGFL*DKDQKW
Trigger: CCATTTCTGGTCTTTGTCCAACAGGAAACCCATTTC...TTCCCACTGTCTGAGCCAAGCAGGACCCTGTCCCAGAGCAAGAGATGTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCGTGTGTCTGTTGTCTCTGTGTGGTTaGAAAACTGGACAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: TYRTGAGGSGLNQELVCLLSLCG*KTGQSS
Trigger: TGAACTCTGTCCAGTTTTCAAACCACACAGAGACAA...CAGACACACGAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS CCA 90 bp CAGAAAACAGCTGGGGAGAACAGCTCTGAAGCCCAGACGTGCAGATaGTCCAGTCGCAACAAATCTGTGCTACACTCACAAGGAATCAGT +
Preference number: 5 (lower is better)
Translates to: QKTAGENSSEAQTCR*SSRNKSVLHSQGIS
Trigger: ACTGATTCCTTGTGAGTGTAGCACAGATTTGTTGCGACTGGACCATCTGCACGTCTGGGCTTCAGAGCTGTTCTCCCCAGCTGTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438837.1
CDS-3UTR CAA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTGCTTCAAAGCTGCTCTaGGCCCAGCACAGACCTTAC +
Preference number: 5 (lower is better)
Translates to: FSDTRHERPELNHIAFIVASKLL*AQHRPY
Trigger: GTAAGGTCTGTGCTGGGCCAAGAGCAGCTTTGAAGC...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGCAGCTGCTCCGTGGTTaGACAGCAGGCAGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQQLLRG*TAGSLG
Trigger: CCCCAGACTGCCTGCTGTCAAACCACGGAGCAGCTG...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAGCCACCTTGAGGTTATaGGGGTGCTTGTGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: PPFTVRPNVSKLALTSLRATLRL*GCLCVH
Trigger: GTGGACACACAAGCACCCCAATAACCTCAAGGTGGC...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACGGGCAGGAGAACCACTaGAACCCAGGAAGCGGAGTT +
Preference number: 5 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYGQENH*NPGSGV
Trigger: AACTCCGCTTCCTGGGTTCAAGTGGTTCTCCTGCCC...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTGCCCGGGCAGTGGCTaGGACACAGCTGTCACGCCA +
Preference number: 5 (lower is better)
Translates to: DFKKDPIVEFILTVYREKCPGSG*DTAVTP
Trigger: TGGCGTGACAGCTGTGTCCAAGCCACTGCCCGGGCA...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS CCA 90 bp ACACCCCATCAAAATCAGCTTATTCATCAGCATCGCAAGCTGGTCTaGACGCTTCCAGAGTCTACCCATCCAACTTCATGTGCCAGACAA +
Preference number: 5 (lower is better)
Translates to: TPHQNQLIHQHRKLV*TLPESTHPTSCARQ
Trigger: TTGTCTGGCACATGAAGTTGGATGGGTAGACTCTGGAAGCGTCCAGACCAGCTTGCGATGCTGATGAATAAGCTGATTTTGATGGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS CCA 90 bp TTCACACACCCCATCAAAATCAGCTTATTCATCAGCATCGCAAGCTaGTCTGGACGCTTCCAGAGTCTACCCATCCAACTTCATGTGCCA +
Preference number: 5 (lower is better)
Translates to: FTHPIKISLFISIAS*SGRFQSLPIQLHVP
Trigger: TGGCACATGAAGTTGGATGGGTAGACTCTGGAAGCGTCCAGACCAGCTTGCGATGCTGATGAATAAGCTGATTTTGATGGGGTGTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327574.4
CDS-3UTR CAA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACGCTTCAAAGCTGCTCTaGGCCCAGCACAGACCTTAC +
Preference number: 5 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYASKLL*AQHRPY
Trigger: GTAAGGTCTGTGCTGGGCCAAGAGCAGCTTTGAAGC...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGACCAAGAATCAAAGCTaGCTCGCCAGGGCACACCGC +
Preference number: 5 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQTKNQS*LARAHR
Trigger: GCGGTGTGCCCTGGCGAGCAAGCTTTGATTCTTGGT...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GACACAGGTTCTCCCAGCTGCTCGACACGCTGTGGGATGTACTGGAAGGGTCTTTTAAAAAGGATCCTATaGTGGAATTCATCCTTACGG +
Preference number: 5 (lower is better)
Translates to: DTGSPSCSTRCGMYWKGLLKRIL*WNSSLR
Trigger: CCGTAAGGATGAATTCCACAATAGGATCCTTTTTAA...AAGACCCTTCCAGTACATCCCACAGCGTGTCGAGCAGCTGGGAGAACCTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GGGGCTTTGGCCTCTTACCTGGTGCAGGCAACTCTCTTGCCTGGTGATCTCAAGTTAAAAAGGATCCTATaGTGGAATTCATCCTTACGG +
Preference number: 5 (lower is better)
Translates to: GALASYLVQATLLPGDLKLKRIL*WNSSLR
Trigger: CCGTAAGGATGAATTCCACAATAGGATCCTTTTTAA...CTTGAGATCACCAGGCAAGAGAGTTGCCTGCACCAGGTAAGAGGCCAAAGCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GCTAAGCCAAGCCAGCCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTGAAATGGGTTTCCTGTaGGACAAAGACCAGAAATGG +
Preference number: 5 (lower is better)
Translates to: AKPSQPPFTVRPNVSKLAEMGFL*DKDQKW
Trigger: CCATTTCTGGTCTTTGTCCAACAGGAAACCCATTTC...AGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGGCTGGCTTGGCTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CAAGAACCTTCTCCAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCTTGTCTCTGTGTGGTTaGAAAACTGGACAGAGTTCA +
Preference number: 5 (lower is better)
Translates to: QEPSPTGEGAWILCPTHSLSLCG*KTGQSS
Trigger: TGAACTCTGTCCAGTTTTCAAACCACACAGAGACAA...GGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTGGAGAAGGTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp GTATCTTTAACTTATCGGACAGGAGCTGGTGGGAGCGGGCTTAACCAGGAGCTCGCTTTCCACAACTTATaGTCCCATATTTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: VSLTYRTGAGGSGLNQELAFHNL*SHIFMA
Trigger: GGCCATGAAAATATGGGACAATAAGTTGTGGAAAGC...GAGCTCCTGGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGTTAAAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS-3UTR CAA 90 bp ATGGCCTCTTTTAACCTGCTGACCTCTGTAGGGGCTCCATCTCCAAACCCAGTCGGAATGTCTTTCTCCTaGAACACGGTGTTTACAGAT +
Preference number: 5 (lower is better)
Translates to: MASFNLLTSVGAPSPNPVGMSFS*NTVFTD
Trigger: ATCTGTAAACACCGTGTTCAAGGAGAAAGACATTCC...GACTGGGTTTGGAGATGGAGCCCCTACAGAGGTCAGCAGGTTAAAAGAGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS CCA 90 bp AAACCCCATCAAAATCAGCTTATTCATCAGCATCGCAAGCTGGTCTaGACGCTTCCAGAGTCTACCCATCCAACTTCATGTGCCAGACAA +
Preference number: 5 (lower is better)
Translates to: KPHQNQLIHQHRKLV*TLPESTHPTSCARQ
Trigger: TTGTCTGGCACATGAAGTTGGATGGGTAGACTCTGGAAGCGTCCAGACCAGCTTGCGATGCTGATGAATAAGCTGATTTTGATGGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476313.5
CDS-3UTR CAA 90 bp ATTTGTGGATATCATACAAGTCAACAGGACCAGCACGAAACAGATGCAGCCTACTCGGCCTCAAACTGGTaGGGCGTGATAATGTCTGCA +
Preference number: 5 (lower is better)
Translates to: ICGYHTSQQDQHETDAAYSASNW*GVIMSA
Trigger: TGCAGACATTATCACGCCCAACCAGTTTGAGGCCGA...GTAGGCTGCATCTGTTTCGTGCTGGTCCTGTTGACTTGTATGATATCCACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGTGCCCCACACCCACCTaGGAAGATTGGCAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWCPTPT*EDWQLP
Trigger: TGGAAGCTGCCAATCTTCCAAGGTGGGTGTGGGGCA...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp GGAGGCTTTCCTCCTCAGAGGCCTCTTGTGGCTTTCCACAACTTATTGTCCCATGGAATGTCTTTCTCCTaGAACACGGTGTTTACAGAT +
Preference number: 5 (lower is better)
Translates to: GGFPPQRPLVAFHNLLSHGMSFS*NTVFTD
Trigger: ATCTGTAAACACCGTGTTCAAGGAGAAAGACATTCC...ATGGGACAATAAGTTGTGGAAAGCCACAAGAGGCCTCTGAGGAGGAAAGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS GCA 90 bp CTATTTTCTGTGTCTTTGATGACAGTCATCCTAATTGCTGTGAGGTaGTATTCATCACTGTTTGTCACCCAAGCAGGTGCAGCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: LFSVSLMTVILIAVR*YSSLFVTQAGAAAP
Trigger: GGGAGCTGCTGCACCTGCTTGGGTGACAAACAGTGATGAATAGCACCTCACAGCAATTAGGATGACTGTCATCAAAGACACAGAAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470029.5
CDS-3UTR CAA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGCCTTCGCCGTCCCACTaGTCACCCAAGACTGGATCA +
Preference number: 5 (lower is better)
Translates to: DFKKDPIVEFILTVYREKPSPSH*SPKTGS
Trigger: TGATCCAGTCTTGGGTGACAAGTGGGACGGCGAAGG...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGAAGACGGCGTCCACTTaGCGAATGTCCATCCGGATG +
Preference number: 5 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWKTAST*RMSIRM
Trigger: CATCCGGATGGACATTCGCAAAGTGGACGCCGTCTT...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CTTTGTTATTTTTCACAAAGCACGACTGGCACGTTTCACAATGAAGACCAGCAGGAGTTTGAGACCAGCTaGGCCAACATGGTGAAACCC +
Preference number: 5 (lower is better)
Translates to: LCYFSQSTTGTFHNEDQQEFETS*ANMVKP
Trigger: GGGTTTCACCATGTTGGCCAAGCTGGTCTCAAACTC...CTGCTGGTCTTCATTGTGAAACGTGCCAGTCGTGCTTTGTGAAAAATAACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp TTCTCTGACACCAGGCACGAGAGGCCTGAGCTCAACCACATAGCTTTTATTGTTTCATATTTATTCATGTaGTTCAGCCTCAGGCCTTCG +
Preference number: 5 (lower is better)
Translates to: FSDTRHERPELNHIAFIVSYLFM*FSLRPS
Trigger: CGAAGGCCTGAGGCTGAACAACATGAATAAATATGA...AACAATAAAAGCTATGTGGTTGAGCTCAGGCCTCTCGTGCCTGGTGTCAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp ATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGTTTGAAAAACTGGGTGCAGGCAACTCTCTaGCCTGGTGATCTCAAGATG +
Preference number: 5 (lower is better)
Translates to: ILLWNSSLRSTGRSLKNWVQATL*PGDLKM
Trigger: CATCTTGAGATCACCAGGCAAGAGAGTTGCCTGCAC...CCAGTTTTTCAAACTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CCTCCGTTCACGGTAAGACCAAACGTTTCAAAACTGGCTCTAACGAGCTTAAGAGAAATGGGTTTCCTGTaGGACAAAGACCAGAAATGG +
Preference number: 5 (lower is better)
Translates to: PPFTVRPNVSKLALTSLREMGFL*DKDQKW
Trigger: CCATTTCTGGTCTTTGTCCAACAGGAAACCCATTTC...TCTTAAGCTCGTTAGAGCCAGTTTTGAAACGTTTGGTCTTACCGTGAACGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS-3UTR CAA 90 bp CAACAGGGGAGGGCGCTTGGATCTTGTGTCCAACTCATTCCATTTACAGATGAAGGAATGTCTTTCTCCTaGAACACGGTGTTTACAGAT +
Preference number: 5 (lower is better)
Translates to: QQGRALGSCVQLIPFTDEGMSFS*NTVFTD
Trigger: ATCTGTAAACACCGTGTTCAAGGAGAAAGACATTCC...TTCATCTGTAAATGGAATGAGTTGGACACAAGATCCAAGCGCCCTCCCCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS GCA 90 bp CTCACACTTGCTATTTTCTGTGTCTTTGATGACAGTCATCCTAATTaGTGTGAGGTGCTATTCATCACTGTTTGTCACCCAAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LTLAIFCVFDDSHPN*CEVLFITVCHPSRC
Trigger: GCACCTGCTTGGGTGACAAACAGTGATGAATAGCACCTCACAGCAATTAGGATGACTGTCATCAAAGACACAGAAAATAGCAAGTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470029.5
CDS GCA 90 bp CTTGACGTCATCAACTTCTGGGCCTTTAATTCACCCCTTGGTTTATaGCACTTTCAAATTTCTCTGAAGGCTCCTTCCAGATTGAATGCT +
Preference number: 5 (lower is better)
Translates to: LDVINFWAFNSPLGL*HFQISLKAPSRLNA
Trigger: AGCATTCAATCTGGAAGGAGCCTTCAGAGAAATTTGAAAGTGGCATAAACCAAGGGGTGAATTAAAGGCCCAGAAGTTGATGACGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS-3UTR CAA 90 bp GATTTTAAAAAGGATCCTATTGTGGAATTCATCCTTACGGTCTACAGGGAGAAGAATAAGCAGGCGATGTaGGACCAGTATAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: DFKKDPIVEFILTVYREKNKQAM*DQYSCH
Trigger: GTGACAGCTATACTGGTCCAACATCGCCTGCTTATT...CTTCTCCCTGTAGACCGTAAGGATGAATTCCACAATAGGATCCTTTTTAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291565.9
ENST00000467908.1
ENST00000468090.5
CDS TCA 72 bp CGCGCGGCGGACCCGATCAGCGCAGACGCCTCCTTCTaGCCTCAGCGGGCGGCTCCGAACCCGCGAGTTCCG +
Preference number: 6 (lower is better)
Translates to: RAADPISADASF*PQRAAPNPRVP
Trigger: CGGAACTCGCGGGTTCGGAGCCGCCCGCTGAGGTCAGAAGGAGGCGTCTGCGCTGATCGGGTCCGCCGCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398081.5
ENST00000468090.5
CDS CCA 72 bp CGGGGAGCCGGCTCCGCCAATGCACGTGCTGAACCCTaGAGGACAGGCTGCGGACTGCCCACCACGGAGAGC +
Preference number: 6 (lower is better)
Translates to: RGAGSANARAEP*RTGCGLPTTES
Trigger: GCTCTCCGTGGTGGGCAGTCCGCAGCCTGTCCTCCAGGGTTCAGCACGTGCATTGGCGGAGCCGGCTCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS CCA 72 bp GTGTCACGGGCAAGCGGCGGGGCCCTCACAGCACCGTaGCCTGGACGACGATCTCTGGGTCCTCGATGTCCC +
Preference number: 6 (lower is better)
Translates to: VSRASGGALTAP*PGRRSLGPRCP
Trigger: GGGACATCGAGGACCCAGAGATCGTCGTCCAGGCCACGGTGCTGTGAGGGCCCCGCCGCTTGCCCGTGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS TCA 72 bp GGAACGTGGCCGCCCGGTTGCCCACGTAGCCGCGGATaGCGTGGCTCTGTATGGAGAGCACCCGGCACTCCT +
Preference number: 6 (lower is better)
Translates to: GTWPPGCPRSRG*RGSVWRAPGTP
Trigger: AGGAGTGCCGGGTGCTCTCCATACAGAGCCACGTCATCCGCGGCTACGTGGGCAACCGGGCGGCCACGTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291565.9
ENST00000398081.5
ENST00000398085.7
ENST00000468090.5
ENST00000470029.5
ENST00000476084.1
CDS GCA 72 bp CCAGGAGGGGATTTCCAGGGAACACAAGGGCCGTCCTaGTCTCCGAGCCACCGGGGAGCCGGCTCCGCCAAT +
Preference number: 6 (lower is better)
Translates to: PGGDFQGTQGPS*SPSHRGAGSAN
Trigger: ATTGGCGGAGCCGGCTCCCCGGTGGCTCGGAGAGCAGGACGGCCCTTGTGTTCCCTGGAAATCCCCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS CCA 72 bp AGGAAGCCATGGGGGCTCAGACACAAGGGGGCCAGCTaGGGCCGTGGGCTTCCCTTGACACCCGCCCACTCT +
Preference number: 6 (lower is better)
Translates to: RKPWGLRHKGAS*GRGLPLTPAHS
Trigger: AGAGTGGGCGGGTGTCAAGGGAAGCCCACGGCCCCAGCTGGCCCCCTTGTGTCTGAGCCCCCATGGCTTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398078.7
CDS CCA 72 bp AGCACGGAGGTCACATGTGTCCCAGGCGGCAGTGCCTaGCACCCAGCCTCGGCGGCTCCAGAGGCTGACAGA +
Preference number: 6 (lower is better)
Translates to: STEVTCVPGGSA*HPASAAPEADR
Trigger: TCTGTCAGCCTCTGGAGCCGCCGAGGCTGGGTGCCAGGCACTGCCGCCTGGGACACATGTGACCTCCGTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS GCA 72 bp ATGCACGTGCTGAACCCTGGAGGACAGGCTGCGGACTaGCCACCACGGAGAGCCCGGAGGGCTGAGCAGATG +
Preference number: 6 (lower is better)
Translates to: MHVLNPGGQAAD*PPRRARRAEQM
Trigger: CATCTGCTCAGCCCTCCGGGCTCTCCGTGGTGGGCAGTCCGCAGCCTGTCCTCCAGGGTTCAGCACGTGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS CCA 72 bp ACGGGCAAGCGGCGGGGCCCTCACAGCACCGTGGCCTaGACGACGATCTCTGGGTCCTCGATGTCCCTTTTG +
Preference number: 6 (lower is better)
Translates to: TGKRRGPHSTVA*TTISGSSMSLL
Trigger: CAAAAGGGACATCGAGGACCCAGAGATCGTCGTCCAGGCCACGGTGCTGTGAGGGCCCCGCCGCTTGCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS TCA 72 bp CAGTGCCTGGCACCCAGCCTCGGCGGCTCCAGAGGCTaGCAGATGAAGGACACGGATATCACCCAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: QCLAPSLGGSRG*QMKDTDITQPA
Trigger: CGCTGGCTGGGTGATATCCGTGTCCTTCATCTGTCAGCCTCTGGAGCCGCCGAGGCTGGGTGCCAGGCACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS GCA 72 bp ACTGCCCACCACGGAGAGCCCGGAGGGCTGAGCAGATaGCCGGTCCCAGCTACCTTGAGGTTATTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: TAHHGEPGGLSR*PVPATLRLLGC
Trigger: GCACCCCAATAACCTCAAGGTAGCTGGGACCGGGCATCTGCTCAGCCCTCCGGGCTCTCCGTGGTGGGCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS GCA 72 bp TGCCCCTGGCCCACTCACAACACCCGACGTGCCCACTaGTGCCAGGAGGGGATTTCCAGGGAACACAAGGGC +
Preference number: 6 (lower is better)
Translates to: CPWPTHNTRRAH*CQEGISREHKG
Trigger: GCCCTTGTGTTCCCTGGAAATCCCCTCCTGGCAGCAGTGGGCACGTCGGGTGTTGTGAGTGGGCCAGGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS CAA 90 bp AGCACCGTGGCCTGGACGACGATCTCTGGGTCCTCGATGTCCCTTTaGCTCTGCACCATCCGCAGCTCCAGCTGCATGGGGCTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: STVAWTTISGSSMSL*LCTIRSSSCMGLGL
Trigger: GAGGCCCAGCCCCATGCAGCTGGAGCTGCGGATGGTGCAGAGCAAAAGGGACATCGAGGACCCAGAGATCGTCGTCCAGGCCACGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS GCA 72 bp GTTTTCACAGGGACAAACACGGAGACACCAACGCGCTaGGTGTCACGGGCAAGCGGCGGGGCCCTCACAGCA +
Preference number: 6 (lower is better)
Translates to: VFTGTNTETPTR*VSRASGGALTA
Trigger: TGCTGTGAGGGCCCCGCCGCTTGCCCGTGACACGCAGCGCGTTGGTGTCTCCGTGTTTGTCCCTGTGAAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS GCA 72 bp GGTCTTCTCACAGGCCACCTGCAGGGAGGACAGACTTaGTGTGCCCCTGGCCCACTCACAACACCCGACGTG +
Preference number: 6 (lower is better)
Translates to: GLLTGHLQGGQT*CAPGPLTTPDV
Trigger: CACGTCGGGTGTTGTGAGTGGGCCAGGGGCACAGCAAGTCTGTCCTCCCTGCAGGTGGCCTGTGAGAAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS GCA 72 bp CCTCCTGGGAACTTCCTGCGGGGGCCGCAGCGGAAGTaGTTTCAACCTCATCAGTCATCCGGCTGGACCGCA +
Preference number: 6 (lower is better)
Translates to: PPGNFLRGPQRK*FQPHQSSGWTA
Trigger: TGCGGTCCAGCCGGATGACTGATGAGGTTGAAAGCACTTCCGCTGCGGCCCCCGCAGGAAGTTCCCAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498040.5
CDS CCA 72 bp GGGCCCTCACAGCACCGTGGCCTGGACGACGATCTCTaGGTCCTCGATGTCCCTTTTGCTCTGCACCATCCG +
Preference number: 6 (lower is better)
Translates to: GPSQHRGLDDDL*VLDVPFALHHP
Trigger: CGGATGGTGCAGAGCAAAAGGGACATCGAGGACCCAGAGATCGTCGTCCAGGCCACGGTGCTGTGAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS CCA 72 bp GTGGGCATAGCCTGCCTGGTGGACGGCTCCTCCCCATaGACTGGCTCAAACCCGAAGGAGATCACTAGGCGC +
Preference number: 6 (lower is better)
Translates to: VGIACLVDGSSP*TGSNPKEITRR
Trigger: GCGCCTAGTGATCTCCTTCGGGTTTGAGCCAGTCCATGGGGAGGAGCCGTCCACCAGGCAGGCTATGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343528.10
CDS CAA 90 bp CTTCAGCTGGAAGCCAGCGCTCTGTGCCGGACCATGCCTCTGGAATaGGCATCTCTGTACAGCAGTGGCTCCCTCCCAGGCACCACCAGG +
Preference number: 6 (lower is better)
Translates to: LQLEASALCRTMPLE*ASLYSSGSLPGTTR
Trigger: CCTGGTGGTGCCTGGGAGGGAGCCACTGCTGTACAGAGATGCCAATTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTCCAGCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000438837.1
ENST00000476313.5
CDS TCA 72 bp TGGCACCCAGCCTCGGCGGCTCCAGAGGCTGACAGATaGAGGACACGGATATCACCCAGCCAGCGGGAATCT +
Preference number: 6 (lower is better)
Translates to: WHPASAAPEADR*RTRISPSQRES
Trigger: AGATTCCCGCTGGCTGGGTGATATCCGTGTCCTTCATCTGTCAGCCTCTGGAGCCGCCGAGGCTGGGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS GCA 72 bp GAGCTGGTGATGACCACGGTGTCGGGGCCCATAGAGTaGAGCATGTCCATCACCCGCAAGGCTTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: ELVMTTVSGPIE*SMSITRKASSW
Trigger: CCAGGAGGAAGCCTTGCGGGTGATGGACATGCTGCACTCTATGGGCCCCGACACCGTGGTCATCACCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS CCA 72 bp TCCAGTGGGCATAGCCTGGTGGACGGCTCCTCCCCATaGACTGGCTCAAACCCGAAGGAGATCACTAGGCGC +
Preference number: 6 (lower is better)
Translates to: SSGHSLVDGSSP*TGSNPKEITRR
Trigger: GCGCCTAGTGATCTCCTTCGGGTTTGAGCCAGTCCATGGGGAGGAGCCGTCCACCAGGCTATGCCCACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467908.1
CDS CCA 72 bp CAGCGGAAGTGCTTTCAACCTCATCAGTCATCCGGCTaGACCGCAGGAGCTCTCCGACTCCCTTCCCCCTGC +
Preference number: 6 (lower is better)
Translates to: QRKCFQPHQSSG*TAGALRLPSPC
Trigger: GCAGGGGGAAGGGAGTCGGAGAGCTCCTGCGGTCCAGCCGGATGACTGATGAGGTTGAAAGCACTTCCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498040.5
CDS CAA 72 bp GCCTGGACGACGATCTCTGGGTCCTCGATGTCCCTTTaGCTCTGCACCATCCGCAGCTCCAGCTGCATGGGG +
Preference number: 6 (lower is better)
Translates to: AWTTISGSSMSL*LCTIRSSSCMG
Trigger: CCCCATGCAGCTGGAGCTGCGGATGGTGCAGAGCAAAAGGGACATCGAGGACCCAGAGATCGTCGTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS CAA 72 bp GAAGCCAGCGCTCTGTGCCGGACCATGCCTCTGGAATaGGCATCTCTGTACAGCAGTGGCTCCCTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: EASALCRTMPLE*ASLYSSGSLPG
Trigger: GCCTGGGAGGGAGCCACTGCTGTACAGAGATGCCAATTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000438837.1
ENST00000476313.5
CDS CAA 90 bp GGAAGGAGGTCCTCCGGGACGTACATCGAGCCTTCGCCGTCCCACTaGTCACCCAAGACTGGATCACACACGTACACCAGCCTGGGGTTC +
Preference number: 6 (lower is better)
Translates to: GRRSSGTYIEPSPSH*SPKTGSHTYTSLGF
Trigger: GAACCCCAGGCTGGTGTACGTGTGTGATCCAGTCTTGGGTGACAAGTGGGACGGCGAAGGCTCGATGTACGTCCCGGAGGACCTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS CCA 72 bp GAGTGCAGCATGTCCATCACCCGCAAGGCTTCCTCCTaGCTGTGGATCTTCCGGCCACTCAGTAACTCGGCC +
Preference number: 6 (lower is better)
Translates to: ECSMSITRKASS*LWIFRPLSNSA
Trigger: GGCCGAGTTACTGAGTGGCCGGAAGATCCACAGCCAGGAGGAAGCCTTGCGGGTGATGGACATGCTGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS CCA 72 bp AAGCCAGCGCTCTGTGCCGGACCATGCCTCTGGAATTaGCATCTCTGTACAGCAGTGGCTCCCTCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: KPALCAGPCLWN*HLCTAVAPSQA
Trigger: TGCCTGGGAGGGAGCCACTGCTGTACAGAGATGCCAATTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000438837.1
ENST00000476313.5
CDS CCA 72 bp AGCTGGAAGCCAGCGCTCTGTGCCGGACCATGCCTCTaGAATTGGCATCTCTGTACAGCAGTGGCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: SWKPALCAGPCL*NWHLCTAVAPS
Trigger: GGAGGGAGCCACTGCTGTACAGAGATGCCAATTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000438837.1
ENST00000476313.5
CDS CCA 72 bp GCTGCAGTGAGCTGGTTGCGCCACTTCACGCCAGCCTaGGCGACAGAGACCGACCTTGTCTCTGTGTGGTTT +
Preference number: 6 (lower is better)
Translates to: AAVSWLRHFTPA*ATETDLVSVWF
Trigger: AAACCACACAGAGACAAGGTCGGTCTCTGTCGCCCAGGCTGGCGTGAAGTGGCGCAACCAGCTCACTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS CCA 72 bp CACGTGACCACCCCAGTAACAACCCTGGGCAGGAGGTaGGCGTGCTGGTGCACAACTATAGTCCCAGCCACT +
Preference number: 6 (lower is better)
Translates to: HVTTPVTTLGRR*ACWCTTIVPAT
Trigger: AGTGGCTGGGACTATAGTTGTGCACCAGCACGCCCACCTCCTGCCCAGGGTTGTTACTGGGGTGGTCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS CAA 90 bp ATGGCAGCAAACAGGTCCCCAGTGCCCACAAAGACGGCGTCCACTTaGCGAATGTCCATCCGGATGCGTTCCATCACCACGGAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: MAANRSPVPTKTAST*RMSIRMRSITTEPA
Trigger: CGCTGGCTCCGTGGTGATGGAACGCATCCGGATGGACATTCGCAAAGTGGACGCCGTCTTTGTGGGCACTGGGGACCTGTTTGCTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS GCA 72 bp CAAAGACGGCGTCCACTTTGCGAATGTCCATCCGGATaGGTTCCATCACCACGGAGCCAGCGGGATTCCTCC +
Preference number: 6 (lower is better)
Translates to: QRRRPLCECPSG*VPSPRSQRDSS
Trigger: GGAGGAATCCCGCTGGCTCCGTGGTGATGGAACGCATCCGGATGGACATTCGCAAAGTGGACGCCGTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
ENST00000490666.5
ENST00000498040.5
CDS GCA 72 bp ACAGGTCCCCAGTGCCCACAAAGACGGCGTCCACTTTaGGAATGTCCATCCGGATGCGTTCCATCACCACGG +
Preference number: 6 (lower is better)
Translates to: TGPQCPQRRRPL*ECPSGCVPSPR
Trigger: CCGTGGTGATGGAACGCATCCGGATGGACATTCGCAAAGTGGACGCCGTCTTTGTGGGCACTGGGGACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS GCA 72 bp GTGAAACTGAAGCCTGCAGGCGTGCGCCCCGTCTCCTaGCGAGAGAGAAAGCCAGTCAGATGGCTACACTCT +
Preference number: 6 (lower is better)
Translates to: VKLKPAGVRPVS*RERKPVRWLHS
Trigger: AGAGTGTAGCCATCTGACTGGCTTTCTCTCTCGGCAGGAGACGGGGCGCACGCCTGCAGGCTTCAGTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000476313.5
CDS GCA 72 bp GGACGGGAGCCTGGGACCCCAGAGAAAGGTATCTCCTaGTGTTACACATGTCCTTCAGCTGGAAGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: GREPGTPEKGIS*CYTCPSAGSQR
Trigger: GCGCTGGCTTCCAGCTGAAGGACATGTGTAACAGCAGGAGATACCTTTCTCTGGGGTCCCAGGCTCCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000476313.5
CDS GCA 72 bp GACAAGCACTCTCCGTACACCAGCCTGGGGTTCTGCTaGTTCAGCTCCTGCACAATGTCCACCACCATGGCC +
Preference number: 6 (lower is better)
Translates to: DKHSPYTSLGFC*FSSCTMSTTMA
Trigger: GGCCATGGTGGTGGACATTGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCTGGTGTACGGAGAGTGCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470029.5
CDS GCA 72 bp CCAGCGGGAATCTACTACCTGTCCATCTGGACGGGATaGACAGTGACAGGACAGGCTTGCCTCTCCCCACAG +
Preference number: 6 (lower is better)
Translates to: PAGIYYLSIWTG*TVTGQACLSPQ
Trigger: CTGTGGGGAGAGGCAAGCCTGTCCTGTCACTGTGCATCCCGTCCAGATGGACAGGTAGTAGATTCCCGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS CAA 72 bp TCCTCCGGGACGTACATCGAGCCTTCGCCGTCCCACTaGTCACCCAAGACTGGATCACACACGTACACCAGC +
Preference number: 6 (lower is better)
Translates to: SSGTYIEPSPSH*SPKTGSHTYTS
Trigger: GCTGGTGTACGTGTGTGATCCAGTCTTGGGTGACAAGTGGGACGGCGAAGGCTCGATGTACGTCCCGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS CAA 72 bp TCCTCCGGGACGTACATCGAGCCTTCGCCGTCCCACTaGTCACCCAAGACTGGATCACACACTGTGAGCACG +
Preference number: 6 (lower is better)
Translates to: SSGTYIEPSPSH*SPKTGSHTVST
Trigger: CGTGCTCACAGTGTGTGATCCAGTCTTGGGTGACAAGTGGGACGGCGAAGGCTCGATGTACGTCCCGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468090.5
CDS CAA 90 bp GGAAGGAGGTCCTCCGGGACGTACATCGAGCCTTCGCCGTCCCACTaGTCACCCAAGACTGGATCACACACTGCAGAGACACAAGGGCAT +
Preference number: 6 (lower is better)
Translates to: GRRSSGTYIEPSPSH*SPKTGSHTAETQGH
Trigger: ATGCCCTTGTGTCTCTGCAGTGTGTGATCCAGTCTTGGGTGACAAGTGGGACGGCGAAGGCTCGATGTACGTCCCGGAGGACCTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468392.5
CDS TCA 72 bp GAATCTACTACCTGTCCATCTGGACGGGATGCACAGTaGCAGGACAGGCTTGCCTCTCCCCACAGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: ESTTCPSGRDAQ*QDRLASPHRAA
Trigger: AGCTGCCCTGTGGGGAGAGGCAAGCCTGTCCTGTCACTGTGCATCCCGTCCAGATGGACAGGTAGTAGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS GCA 72 bp ACTGGATCACACACGTACACCAGCCTGGGGTTCTGCTaGTTCAGCTCCTGCACAATGTCCACCACCATGGCC +
Preference number: 6 (lower is better)
Translates to: TGSHTYTSLGFC*FSSCTMSTTMA
Trigger: GGCCATGGTGGTGGACATTGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCTGGTGTACGTGTGTGATCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000472777.5
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS GCA 72 bp TCCCCGGCCTGGGCTTTTGCACACTGGATGGTCCTCTaGAGAACGTGGTGCAAGGTAGACACGGTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SPAWAFAHWMVL*RTWCKVDTVFS
Trigger: TGAGAAGACCGTGTCTACCTTGCACCACGTTCTGCAGAGGACCATCCAGTGTGCAAAAGCCCAGGCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS GCA 72 bp TCCTTCAGCTGGAAGCCAGCGCTCTGTGCCGGACCATaGCTCTGGAATTGGCATCTCTGTACAGCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: SFSWKPALCAGP*LWNWHLCTAVA
Trigger: AGCCACTGCTGTACAGAGATGCCAATTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTCCAGCTGAAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000438837.1
ENST00000476313.5
CDS GCA 72 bp AGATGCCCGGTCCCAGCTACCTTGAGGTTATTGGGGTaGTTGTGTGTCCACGCCAGGAGCATGGCAGCAAAC +
Preference number: 6 (lower is better)
Translates to: RCPVPATLRLLG*LCVHARSMAAN
Trigger: GTTTGCTGCCATGCTCCTGGCGTGGACACACAAGCACCCCAATAACCTCAAGGTAGCTGGGACCGGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461123.1
CDS GCA 72 bp ACCGACAAGCACTCTCCGTACACCAGCCTGGGGTTCTaGTGCTTCAGCTCCTGCACAATGTCCACCACCATG +
Preference number: 6 (lower is better)
Translates to: TDKHSPYTSLGF*CFSSCTMSTTM
Trigger: CATGGTGGTGGACATTGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCTGGTGTACGGAGAGTGCTTGTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470029.5
CDS GCA 72 bp CAAATCCCAAAACCTGCAGGCGTGCGCCCCGTCTCCTaGCGAGAGAGAAAGCCAGTCAGATGGCTACACTCT +
Preference number: 6 (lower is better)
Translates to: QIPKPAGVRPVS*RERKPVRWLHS
Trigger: AGAGTGTAGCCATCTGACTGGCTTTCTCTCTCGGCAGGAGACGGGGCGCACGCCTGCAGGTTTTGGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472777.5
ENST00000498040.5
CDS GCA 72 bp GCAGCTACTGGCCTCAGACGTGCTTGGGACAATCTCTaGACAGCCCAGTTTGGAGACTCACAGCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: AATGLRRAWDNL*TAQFGDSQLCC
Trigger: GCAGCACAGCTGTGAGTCTCCAAACTGGGCTGTGCAGAGATTGTCCCAAGCACGTCTGAGGCCAGTAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS CCA 72 bp GACCATGCCTCTGGAATTGGCATCTCTGTACAGCAGTaGCTCCCTCCCAGGCACCACCAGGAGGTACCAAGA +
Preference number: 6 (lower is better)
Translates to: DHASGIGISVQQ*LPPRHHQEVPR
Trigger: TCTTGGTACCTCCTGGTGGTGCCTGGGAGGGAGCCACTGCTGTACAGAGATGCCAATTCCAGAGGCATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000438837.1
ENST00000476313.5
CDS CCA 72 bp ATCACCCAGCCAGCGGGAATCTACTACCTGTCCATCTaGACGGGATGCACAGTGACAGGACAGGCTTGCCTC +
Preference number: 6 (lower is better)
Translates to: ITQPAGIYYLSI*TGCTVTGQACL
Trigger: GAGGCAAGCCTGTCCTGTCACTGTGCATCCCGTCCAGATGGACAGGTAGTAGATTCCCGCTGGCTGGGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS CAA 72 bp AACAGGTCCCCAGTGCCCACAAAGACGGCGTCCACTTaGCGAATGTCCATCCGGATGCGTTCCATCACCACG +
Preference number: 6 (lower is better)
Translates to: NRSPVPTKTAST*RMSIRMRSITT
Trigger: CGTGGTGATGGAACGCATCCGGATGGACATTCGCAAAGTGGACGCCGTCTTTGTGGGCACTGGGGACCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000461123.1
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS CAA 72 bp TCCTCCGGGACGTACATCGAGCCTTCGCCGTCCCACTaGTCACCCAAGACTGGATCACACACTGCAGAGACA +
Preference number: 6 (lower is better)
Translates to: SSGTYIEPSPSH*SPKTGSHTAET
Trigger: TGTCTCTGCAGTGTGTGATCCAGTCTTGGGTGACAAGTGGGACGGCGAAGGCTCGATGTACGTCCCGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468392.5
CDS CAA 72 bp GATGGGGTCTTGCTCATCGAGCCTTCGCCGTCCCACTaGTCACCCAAGACTGGATCACACACGTACACCAGC +
Preference number: 6 (lower is better)
Translates to: DGVLLIEPSPSH*SPKTGSHTYTS
Trigger: GCTGGTGTACGTGTGTGATCCAGTCTTGGGTGACAAGTGGGACGGCGAAGGCTCGATGAGCAAGACCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472777.5
CDS GCA 72 bp ACGGTCTTCTCACAGGCCACCTTGAGGTTATTGGGGTaGTTGTGTGTCCACGCCAGGAGCATGGCAGCAAAC +
Preference number: 6 (lower is better)
Translates to: TVFSQATLRLLG*LCVHARSMAAN
Trigger: GTTTGCTGCCATGCTCCTGGCGTGGACACACAAGCACCCCAATAACCTCAAGGTGGCCTGTGAGAAGACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
CDS CCA 72 bp GAAAGGTATCTCCTGCTGTTACACATGTCCTTCAGCTaGAAGCCAGCGCTCTGTGCCGGACCATGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: ERYLLLLHMSFS*KPALCAGPCLW
Trigger: CCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTCCAGCTGAAGGACATGTGTAACAGCAGGAGATACCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000476313.5
CDS CAA 90 bp CTACTGGCCTCAGACGTGCTTGGGACAATCTCTGCACAGCCCAGTTaGGAGACTCACAGCTGTGCTGCTCCCCTCACTTCCAAAAAGGAC +
Preference number: 6 (lower is better)
Translates to: LLASDVLGTISAQPS*ETHSCAAPLTSKKD
Trigger: GTCCTTTTTGGAAGTGAGGGGAGCAGCACAGCTGTGAGTCTCCAAACTGGGCTGTGCAGAGATTGTCCCAAGCACGTCTGAGGCCAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS TCA 72 bp AGATTGAATGCTGGACCCTCGAAGGATATGTTTAACTaGAACCTGCAGCGGGAACGTGGCCGCCCGGTTGCC +
Preference number: 6 (lower is better)
Translates to: RLNAGPSKDMFN*NLQRERGRPVA
Trigger: GGCAACCGGGCGGCCACGTTCCCGCTGCAGGTTTCAGTTAAACATATCCTTCGAGGGTCCAGCATTCAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS GCA 72 bp AAGACTGGATCACACACGTACACCAGCCTGGGGTTCTaGTGCTTCAGCTCCTGCACAATGTCCACCACCATG +
Preference number: 6 (lower is better)
Translates to: KTGSHTYTSLGF*CFSSCTMSTTM
Trigger: CATGGTGGTGGACATTGTGCAGGAGCTGAAGCAGCAGAACCCCAGGCTGGTGTACGTGTGTGATCCAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000472777.5
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS GCA 72 bp GTTACACATGTCCTTCAGCTGGAAGCCAGCGCTCTGTaGCGGACCATGCCTCTGGAATTGGCATCTCTGTAC +
Preference number: 6 (lower is better)
Translates to: VTHVLQLEASAL*RTMPLELASLY
Trigger: GTACAGAGATGCCAATTCCAGAGGCATGGTCCGGCACAGAGCGCTGGCTTCCAGCTGAAGGACATGTGTAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000476313.5
CDS GCA 72 bp CCCAGACGTGCAGATGGTCCAGTCGCAACAAATCTGTaGTACACTCACAAGGAATCAGTGGGAGCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: PRRADGPVATNL*YTHKESVGAPW
Trigger: CCAGGGAGCTCCCACTGATTCCTTGTGAGTGTAGCACAGATTTGTTGCGACTGGACCATCTGCACGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438837.1
CDS GCA 72 bp CTCTGCACAGCCCAGTTTGGAGACTCACAGCTGTGCTaGTCCCCTCACTTCCAAAAAGGACGTCTTGACGTC +
Preference number: 6 (lower is better)
Translates to: LCTAQFGDSQLC*SPHFQKGRLDV
Trigger: GACGTCAAGACGTCCTTTTTGGAAGTGAGGGGAGCAGCACAGCTGTGAGTCTCCAAACTGGGCTGTGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS CCA 72 bp TGGATCTTCCGGCCACTCAGTAACTCGGCCTCAAACTaGTTGGGCGTGATAATGTCTGCAAGCGGCACCACT +
Preference number: 6 (lower is better)
Translates to: WIFRPLSNSASN*LGVIMSASGTT
Trigger: AGTGGTGCCGCTTGCAGACATTATCACGCCCAACCAGTTTGAGGCCGAGTTACTGAGTGGCCGGAAGATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS CCA 72 bp GAGAGAGAAAGCCAGTCAGATGGCTACACTCTGCCCTaGGGGGTCAAAATAATCCCAGCAGAGTCCAGGCCA +
Preference number: 6 (lower is better)
Translates to: ERESQSDGYTLP*GVKIIPAESRP
Trigger: TGGCCTGGACTCTGCTGGGATTATTTTGACCCCCCAGGGCAGAGTGTAGCCATCTGACTGGCTTTCTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000498040.5
CDS CCA 72 bp GCTGGGGAGAACAGCTCTGAAGCCCAGACGTGCAGATaGTCCAGTCGCAACAAATCTGTGCTACACTCACAA +
Preference number: 6 (lower is better)
Translates to: AGENSSEAQTCR*SSRNKSVLHSQ
Trigger: TTGTGAGTGTAGCACAGATTTGTTGCGACTGGACCATCTGCACGTCTGGGCTTCAGAGCTGTTCTCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438837.1
CDS CCA 72 bp CATCGAGCCTTCGCCGTCCCACTTGTCACCCAAGACTaGATCACACACTGCAGAGACACAAGGGCATCTTAT +
Preference number: 6 (lower is better)
Translates to: HRAFAVPLVTQD*ITHCRDTRASY
Trigger: ATAAGATGCCCTTGTGTCTCTGCAGTGTGTGATCCAGTCTTGGGTGACAAGTGGGACGGCGAAGGCTCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468392.5
CDS GCA 72 bp AAAACAGCTGGGGAGAACAGCTCTGAAGCCCAGACGTaGAGATGGTCCAGTCGCAACAAATCTGTGCTACAC +
Preference number: 6 (lower is better)
Translates to: KTAGENSSEAQT*RWSSRNKSVLH
Trigger: GTGTAGCACAGATTTGTTGCGACTGGACCATCTGCACGTCTGGGCTTCAGAGCTGTTCTCCCCAGCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438837.1
CDS GCA 72 bp AATCTCTGCACAGCCCAGTTTGGAGACTCACAGCTGTaGTGCTCCCCTCACTTCCAAAAAGGACGTCTTGAC +
Preference number: 6 (lower is better)
Translates to: NLCTAQFGDSQL*CSPHFQKGRLD
Trigger: GTCAAGACGTCCTTTTTGGAAGTGAGGGGAGCAGCACAGCTGTGAGTCTCCAAACTGGGCTGTGCAGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS CCA 72 bp GTCAAAATAATCCCAGCAGAGTCCAGGCCAGTGGGATaGCTTAGAAAGGGTCGCAACTTCCTCCTGGGAACT +
Preference number: 6 (lower is better)
Translates to: VKIIPAESRPVG*LRKGRNFLLGT
Trigger: AGTTCCCAGGAGGAAGTTGCGACCCTTTCTAAGCCATCCCACTGGCCTGGACTCTGCTGGGATTATTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498040.5
CDS CAA 72 bp ATCTTCCGGCCACTCAGTAACTCGGCCTCAAACTGGTaGGGCGTGATAATGTCTGCAAGCGGCACCACTTTT +
Preference number: 6 (lower is better)
Translates to: IFRPLSNSASNW*GVIMSASGTTF
Trigger: AAAAGTGGTGCCGCTTGCAGACATTATCACGCCCAACCAGTTTGAGGCCGAGTTACTGAGTGGCCGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000468090.5
ENST00000468392.5
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS CAA 72 bp CCTGGGCGACAGAGACCGACCTTGTCTCTGTGTGGTTaGAAAACTGGACAGAGTTCACCGCGTCAATCTCAA +
Preference number: 6 (lower is better)
Translates to: PGRQRPTLSLCG*KTGQSSPRQSQ
Trigger: TTGAGATTGACGCGGTGAACTCTGTCCAGTTTTCAAACCACACAGAGACAAGGTCGGTCTCTGTCGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS CAA 90 bp TCACGCCAGCCTGGGCGACAGAGACCGACCTTGTCTCTGTGTGGTTaGAAAACTGGACAGAGTTCACCGCGTCAATCTCAAATCCCAAAA +
Preference number: 6 (lower is better)
Translates to: SRQPGRQRPTLSLCG*KTGQSSPRQSQIPK
Trigger: TTTTGGGATTTGAGATTGACGCGGTGAACTCTGTCCAGTTTTCAAACCACACAGAGACAAGGTCGGTCTCTGTCGCCCAGGCTGGCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327574.4
ENST00000398081.5
ENST00000621478.1
CDS GCA 72 bp CTGGACGCTTCCAGAGTCTACCCATCCAACTTCATGTaGCAGACAAAGCCAGACTCAGAAGACGACAATGCA +
Preference number: 6 (lower is better)
Translates to: LDASRVYPSNFM*QTKPDSEDDNA
Trigger: TGCATTGTCGTCTTCTGAGTCTGGCTTTGTCTGGCACATGAAGTTGGATGGGTAGACTCTGGAAGCGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000476313.5
CDS CCA 72 bp TTCATGTTGTTCAGCCTCAGGCCTTCGTACAACTCCTaGAGCTCATCTGAATTCAGCACTTGGCCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: FMLFSLRPSYNS*SSSEFSTWPFQ
Trigger: CTGGAAGGGCCAAGTGCTGAATTCAGATGAGCTCCAGGAGTTGTACGAAGGCCTGAGGCTGAACAACATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000291565.9
ENST00000343528.10
ENST00000398078.7
ENST00000398085.7
ENST00000467908.1
ENST00000468090.5
ENST00000470029.5
ENST00000472777.5
ENST00000481512.5
ENST00000490666.5
ENST00000498040.5
CDS CAA 72 bp AGCTGTGCTGCTCCCCTCACTTCCAAAAAGGACGTCTaGACGTCATCAACTTCTGGGCCTTTAATTCACCCC +
Preference number: 6 (lower is better)
Translates to: SCAAPLTSKKDV*TSSTSGPLIHP
Trigger: GGGGTGAATTAAAGGCCCAGAAGTTGATGACGTCAAGACGTCCTTTTTGGAAGTGAGGGGAGCAGCACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476084.1
CDS CCA 72 bp CCCATCAAAATCAGCTTATTCATCAGCATCGCAAGCTaGTCTGGACGCTTCCAGAGTCTACCCATCCAACTT +
Preference number: 6 (lower is better)
Translates to: PIKISLFISIAS*SGRFQSLPIQL
Trigger: AAGTTGGATGGGTAGACTCTGGAAGCGTCCAGACCAGCTTGCGATGCTGATGAATAAGCTGATTTTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000476313.5
CDS CCA 72 bp CAAAATCAGCTTATTCATCAGCATCGCAAGCTGGTCTaGACGCTTCCAGAGTCTACCCATCCAACTTCATGT +
Preference number: 6 (lower is better)
Translates to: QNQLIHQHRKLV*TLPESTHPTSC
Trigger: ACATGAAGTTGGATGGGTAGACTCTGGAAGCGTCCAGACCAGCTTGCGATGCTGATGAATAAGCTGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327574.4
ENST00000476313.5
CDS TCA 72 bp GAGACACAAGGGCATCTTATCAGCAAAGGCTACAGCTaGCGAGTAAGAAACCCTCCACATTTCTTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: ETQGHLISKGYS*RVRNPPHFFLL
Trigger: AAGAAGAAAGAAATGTGGAGGGTTTCTTACTCGTCAGCTGTAGCCTTTGCTGATAAGATGCCCTTGTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468392.5