Pregenerated sensors for PDXDC2P-NPIPB14P (Homo sapiens)

Ensembl gene IDs: ENSG00000196696

Ensembl transcript IDs: ENST00000525331.6, ENST00000526478.5, ENST00000529089.1, ENST00000530079.5, ENST00000531894.5, ENST00000561788.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CTTTTATGTTCTGTCTCTGATTCTCGGAACTCTGCAAGGTCAGTGTaGCCACCCTGCTCCAAATCTAAGAAAACAGAGGTTTCCAGAGGA	+
Preference number: 5 (lower is better) Translates to: LLCSVSDSRNSARSV*PPCSKSKKTEVSRG Trigger: TCCTCTGGAAACCTCTGTTTTCTTAGATTTGGAGCAGGGTGGTCACACTGACCTTGCAGAGTTCCGAGAATCAGAGACAGAACATAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531894.5
CDS TCA 90 bp	AAACAGGGAGGACAGTATGTATCTCACATTGCTGTGAGGAGTAAATaGGTTGATATGCAATACAAGAAGTGCTTAGCAACAGGGTCTAGA	+
Preference number: 5 (lower is better) Translates to: KQGGQYVSHIAVRSK*VDMQYKKCLATGSR Trigger: TCTAGACCCTGTTGCTAAGCACTTCTTGTATTGCATATCAACTCATTTACTCCTCACAGCAATGTGAGATACATACTGTCCTCCCTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561788.1
CDS GCA 90 bp	TACGAAGTCTTCATATTGAGAATGAATGGCAAGCCTACATATCTTTaGAAGTCCTTCTCTTTCCTCTTCGTGGAAATAAGCACACCCATT	+
Preference number: 5 (lower is better) Translates to: YEVFILRMNGKPTYL*KSFSFLFVEISTPI Trigger: AATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCAATATGAAGACTTCGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000529089.1 ENST00000530079.5 ENST00000531894.5
CDS CCA 72 bp	TTGTGCCCGGGGTCACACAGCTTGCAAGAGGCAGAGTaGAAGTTGATTCCAGCTCTGCCTGCAGGACCCTCT	+
Preference number: 6 (lower is better) Translates to: LCPGSHSLQEAE*KLIPALPAGPS Trigger: AGAGGGTCCTGCAGGCAGAGCTGGAATCAACTTCCACTCTGCCTCTTGCAAGCTGTGTGACCCCGGGCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531894.5
CDS TCA 72 bp	CTCTTGGGTTTCAGTGATTTTTCTGCCTCGGCCTCCTaGGTAGCTAAGGGAGGAGTCTTGAGATTATCATCC	+
Preference number: 6 (lower is better) Translates to: LLGFSDFSASAS*VAKGGVLRLSS Trigger: GGATGATAATCTCAAGACTCCTCCCTTAGCTACTCAGGAGGCCGAGGCAGAAAAATCACTGAAACCCAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000530079.5 ENST00000531894.5
CDS CAA 90 bp	CTACGAAGTCTTCATATTGAGAATGAATGGCAAGCCTACATATCTTaGCAAGTCCTTCTCTTTCCTCTTCGTGGAAATAAGCACACCCAT	+
Preference number: 6 (lower is better) Translates to: LRSLHIENEWQAYIS*QVLLFPLRGNKHTH Trigger: ATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCAATATGAAGACTTCGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000529089.1 ENST00000530079.5 ENST00000531894.5
CDS TCA 72 bp	GCTCATCATGAGTGCCAACCTCAGTTTTCTTCTGTGTaGAACAGGAACAATAGTTTCATTCCTCATTCAGTT	+
Preference number: 6 (lower is better) Translates to: AHHECQPQFSSV*NRNNSFIPHSV Trigger: AACTGAATGAGGAATGAAACTATTGTTCCTGTTTCACACAGAAGAAAACTGAGGTTGGCACTCATGATGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000525331.6 ENST00000526478.5 ENST00000529089.1 ENST00000530079.5 ENST00000531894.5
CDS CCA 72 bp	AGCCATCCACTACGAAGTCTTCATATTGAGAATGAATaGCAAGCCTACATATCTTTGCAAGTCCTTCTCTTT	+
Preference number: 6 (lower is better) Translates to: SHPLRSLHIENE*QAYISLQVLLF Trigger: AAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCAATATGAAGACTTCGTAGTGGATGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000529089.1 ENST00000530079.5 ENST00000531894.5
CDS GCA 72 bp	TTCATATTGAGAATGAATGGCAAGCCTACATATCTTTaGAAGTCCTTCTCTTTCCTCTTCGTGGAAATAAGC	+
Preference number: 6 (lower is better) Translates to: FILRMNGKPTYL*KSFSFLFVEIS Trigger: GCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCAATATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000529089.1 ENST00000530079.5 ENST00000531894.5