RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDXDC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000179889

Ensembl transcript IDs: ENST00000396410.9, ENST00000450288.3, ENST00000535621.6, ENST00000562119.5, ENST00000563679.5, ENST00000565362.5, ENST00000565986.1, ENST00000566633.1, ENST00000569715.5, ENST00000570001.5, ENST00000614833.4, ENST00000617553.4, ENST00000618389.4, ENST00000619589.4, ENST00000627450.2, ENST00000631842.1, ENST00000632212.1, ENST00000632807.1, ENST00000633039.1, ENST00000633964.1

Found 881 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTAAGCAGGGTGCCCGGCTGGATCAGCGTGAGAGAGTGCTCTGCTaGCTCCTGTTTCTGAGTTGGGCCCAGGCGAGCTGCCAGGGCAGT +
Preference number: 1 (lower is better)
Translates to: LKQGARLDQRERVLC*LLFLSWAQASCQGS
Trigger: ACTGCCCTGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAGCCAGCAGAGCACTCTCTCACGCTGATCCAGCCGGGCACCCTGCTTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR CCA 90 bp CCAGAAGCCTCGAGTTCTCCTCTATCTCCCGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAGCATCGACGTTGTCGCTCGCCATGC +
Preference number: 1 (lower is better)
Translates to: PEASSSPLSPGLWPQ*SPRAQQHRRCRSPC
Trigger: GCATGGCGAGCGACAACGTCGATGCTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAGAGGAGAACTCGAGGCTTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR GCA 90 bp GCGACTGCCCGAGGGCGTTGGAGGCAGCGTGACTCCTGCACCTTGTaGTTTGTAGACATATATGGGTTCTGTGGACTCCAGAGAGCCTGC +
Preference number: 1 (lower is better)
Translates to: ATARGRWRQRDSCTL*FVDIYGFCGLQRAC
Trigger: GCAGGCTCTCTGGAGTCCACAGAACCCATATATGTCTACAAAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR TCA 90 bp GAAGCCTCTGCTTGGTGCGACTGCCCGAGGGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTTTGTAGACATATATGGGTTCTGTGG +
Preference number: 1 (lower is better)
Translates to: EASAWCDCPRALEAA*LLHLVLCRHIWVLW
Trigger: CCACAGAACCCATATATGTCTACAAAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR GCA 90 bp CTGCTTGGTGCGACTGCCCGAGGGCGTTGGAGGCAGCGTGACTCCTaGACCTTGTGCTTTGTAGACATATATGGGTTCTGTGGACTCCAG +
Preference number: 1 (lower is better)
Translates to: LLGATARGRWRQRDS*TLCFVDIYGFCGLQ
Trigger: CTGGAGTCCACAGAACCCATATATGTCTACAAAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR CCA 90 bp CTTCTGGCCTGGAAGCCTCTGCTTGGTGCGACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGCACCTTGTGCTTTGTAGACATATAT +
Preference number: 1 (lower is better)
Translates to: LLAWKPLLGATARGR*RQRDSCTLCFVDIY
Trigger: ATATATGTCTACAAAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR TCA 90 bp GATGCGATCTCAGCTCCCTGTAGCCTTGACCTCTCTGGGCTCAAGTaGTTTTTCTCTCCTCTACCTCCCGAGTACTTGGGACCCCAGGCG +
Preference number: 1 (lower is better)
Translates to: DAISAPCSLDLSGLK*FFSPLPPEYLGPQA
Trigger: CGCCTGGGGTCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAGAGGTCAAGGCTACAGGGAGCTGAGATCGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535621.6
3UTR GCA 90 bp AGGGATCTGCCGCAACACCCCCTCTTCCAGAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTGAGCTTCCTGAATGCCTTTCCGAAC +
Preference number: 1 (lower is better)
Translates to: RDLPQHPLFQKPFFT*LLQLHLSFLNAFPN
Trigger: GTTCGGAAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTCTGGAAGAGGGGGTGTTGCGGCAGATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR CCA 90 bp AGAGAGCCTGCTGTCAAGTTAAAAGTTCTTCCCTTCTGTAAAGCCTaGACCGGAGAAAACCAATTCAGCACGGAGCCCACTACAGGGATC +
Preference number: 1 (lower is better)
Translates to: REPAVKLKVLPFCKA*TGENQFSTEPTTGI
Trigger: GATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGGAAGAACTTTTAACTTGACAGCAGGCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR TCA 90 bp CGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTaGAGTGTTGCAGAGAACCTGGAGAGTGCTAATGAAAAGCTGTTT +
Preference number: 1 (lower is better)
Translates to: RTKDRQQRIQPVSPL*SVAENLESANEKLF
Trigger: AAACAGCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR TCA 90 bp GTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCTaGTGCTCTTATTTACAATCCCACAATCACTGCTCTCCTTCAAGT +
Preference number: 1 (lower is better)
Translates to: VLTKSPRRAVAGEGF*CSYLQSHNHCSPSS
Trigger: ACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATAAGAGCATCAGAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR GCA 90 bp CCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATTaGAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAG +
Preference number: 1 (lower is better)
Translates to: PQSLLSFKSSSPTVY*NLIVLKTDSKGYSQ
Trigger: CTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCAATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR GCA 90 bp TACGAAGTCTTCATATCGAGAATGAATGGCAAGCCTACATATCTTTaGAAGTCCTTCTCTTTCCTCTTCGTGGAAATAAGCACACCCATT +
Preference number: 1 (lower is better)
Translates to: YEVFISRMNGKPTYL*KSFSFLFVEISTPI
Trigger: AATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565362.5
3UTR-3UTR GCA 90 bp TCAGTGCTGCTGGCCTCGAGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCTCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 2 (lower is better)
Translates to: SVLLASRVICSGPLDRRSSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...GGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCAGCACTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR GCA 90 bp AGCCTCTGCTTGGTGCGACTGCCCGAGGGCGTTGGAGGCAGCGTGACTCCTGCACCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: SLCLVRLPEGVGGSVTPAPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...TGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR CCA 90 bp CTGGCCTCGAGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCACCTTTTCTCTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 2 (lower is better)
Translates to: LASRVICSGPLDRRSTFSLEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...AGAAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR GCA 90 bp AGCCTCTGCTTGGTGCGACTGCCCGAGGGCGTTGGAGGCAGCGTGACTCCTGCAAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTG +
Preference number: 2 (lower is better)
Translates to: SLCLVRLPEGVGGSVTPAKPFFT*LLQLHL
Trigger: CAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTT...TGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR CCA 90 bp GATTTTTCTCTCCTCTACCTCCCGAGTACTTGGGACCCCAGGCGCATGCCGCCAGTGTGCCCCAGTGCCTaGCCGTCTTGGAGGTCTTGT +
Preference number: 2 (lower is better)
Translates to: DFSLLYLPSTWDPRRMPPVCPSA*PSWRSC
Trigger: ACAAGACCTCCAAGACGGCCAGGCACTGGGGCACAC...TGGCGGCATGCGCCTGGGGTCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535621.6
3UTR CAA 90 bp GGTGCGACTGCCCGAGGGCGTTGGAGGCAGCGTGACTCCTGCACCTaGTGCTTTGTAGACATATATGGGTTCTGTGGACTCCAGAGAGCC +
Preference number: 2 (lower is better)
Translates to: GATARGRWRQRDSCT*CFVDIYGFCGLQRA
Trigger: GGCTCTCTGGAGTCCACAGAACCCATATATGTCTACAAAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR GCA 90 bp AGAAGCCTCGAGTTCTCCTCTATCTCCCGGGCTGTGGCCGCAATGGTCTCCACGCGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: RSLEFSSISRAVAAMVSTRCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...CGTGGAGACCATTGCGGCCACAGCCCGGGAGATAGAGGAGAACTCGAGGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR GCA 90 bp TCAGTGCTGCTGGCCTCGAGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCCTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 2 (lower is better)
Translates to: SVLLASRVICSGPLDRRSLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...GGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCAGCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR CCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACAGCAGGGTGCCCGGCTaGATCAGCGTGAGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDSRVPG*ISVREC
Trigger: GCACTCTCTCACGCTGATCCAGCCGGGCACCCTGCT...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp CGATCTCAGCTCCCTGTAGCCTTGACCTCTCTGGGCTCAAGTGATTTTTCTCTCGGGACCCCAGGCGCATaGCGCCATGCCTGGCTAATG +
Preference number: 2 (lower is better)
Translates to: RSQLPVALTSLGSSDFSLGTPGA*RHAWLM
Trigger: CATTAGCCAGGCATGGCGGCATGCGCCTGGGGTCCC...GAGAGAAAAATCACTTGAGCCCAGAGAGGTCAAGGCTACAGGGAGCTGAGATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535621.6
3UTR-3UTR CCA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTAGCAGGGTGCCCGGCTaGATCAGCGTGAGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: TQYFGKVGTGSASELLLTSRVPG*ISVREC
Trigger: GCACTCTCTCACGCTGATCCAGCCGGGCACCCTGCT...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CCA 90 bp AAAGCATCTGAACCTCGCAGGGACCTTTTAAAAGGCTTCTGGCCTGGAAGCCTCGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: KASEPRRDLLKGFWPGSLGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...GAGGCTTCCAGGCCAGAAGCCTTTTAAAAGGTCCCTGCGAGGTTCAGATGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR CAA 90 bp CACCCCAGCTGGAGTACAGTGATGCGATCTCAGCTCCCTGTAGCCTaGACCTCTCTGGGCTCAAGTGATTTTTCTCTCCTCTACCTCCCG +
Preference number: 2 (lower is better)
Translates to: HPSWSTVMRSQLPVA*TSLGSSDFSLLYLP
Trigger: CGGGAGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAGAGGTCAAGGCTACAGGGAGCTGAGATCGCATCACTGTACTCCAGCTGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535621.6
3UTR CAA 90 bp CAGGGATCTGCCGCAACACCCCCTCTTCCAGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTTGAGCTTCCTGAATGCCTTTCCGAA +
Preference number: 2 (lower is better)
Translates to: QGSAATPPLPEAVLH*PSAAPLELPECLSE
Trigger: TTCGGAAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTCTGGAAGAGGGGGTGTTGCGGCAGATCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR TCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGGCTGGCTCCTGTTTCTaGGTTGGGCCCAGGCGAGCT +
Preference number: 2 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTAGSCF*VGPRRA
Trigger: AGCTCGCCTGGGCCCAACTCAGAAACAGGAGCCAGC...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR TCA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACCGGCTGGATCAGCGTaGGAGAGTGCTCTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLPAGSA*ESALLA
Trigger: AGCCAGCAGAGCACTCTCTCACGCTGATCCAGCCGG...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR TCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGCCAGCGAGCTTCTACTaGCTTAAGCAGGGTGCCCGG +
Preference number: 2 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTPASFY*LKQGAR
Trigger: CCGGGCACCCTGCTTAAGTCAGTAGAAGCTCGCTGG...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTCCCAGACAGCAGCCTTaGCACAGCTCAAGTAGACAC +
Preference number: 2 (lower is better)
Translates to: TQYFGKVGTGSASELLLTPRQQP*HSSSRH
Trigger: GTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGG...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTATGGGCCCAGGCGAGCTaGCAGGGCAGTAGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLWAQAS*QGSRSF
Trigger: GAAGCTTCTACTGCCCTGGCAGCTCGCCTGGGCCCA...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CCA 90 bp CCTCTCTGGGCTCAAGTGATTTTTCTCTCCTCTACCTCCCGAGTACTTGGGACCAGTGCCTGGCCGTCTTaGAGGTCTTGTTTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PLWAQVIFLSSTSRVLGTSAWPS*RSCFSG
Trigger: CCCAGAGAAACAAGACCTCCAAGACGGCCAGGCACT...GGTCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535621.6
3UTR-3UTR TCA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACACCAGCGAGCTTCTACTaGCTTAAGCAGGGTGCCCGG +
Preference number: 2 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTPASFY*LKQGAR
Trigger: CCGGGCACCCTGCTTAAGTCAGTAGAAGCTCGCTGG...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp GCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTAGCCTCTGTGAAGTGTTaGAGAGAACCTGGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: AVLRKSRNGQCQRASTDLASVKC*REPGEC
Trigger: GCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGC...TAAGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGAGTAGGAACGGGCAGTaGCAGCGAGCTTCTACTGAC +
Preference number: 2 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTSRNGQ*QRASTD
Trigger: GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACT...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CCA 90 bp GTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTGTGTTGCAGAGAACCTaGAGAGTGCTAATGAAAAGC +
Preference number: 2 (lower is better)
Translates to: VAEDSPRQQPCHSSSRHSVLQRT*RVLMKS
Trigger: GCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACAC...ACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CCA 90 bp AGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCACCTTTTCTAAGTCTTCACCCTTCTGTAAAGCCTaGACCGGAGAAAACCAATTC +
Preference number: 2 (lower is better)
Translates to: RVICSGPLDRRSTFSKSSPFCKA*TGENQF
Trigger: GAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGG...TGAAGACTTAGAAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR CAA 90 bp CCCCTCTTCCAGAAGCCGTTCTTCACTTGCCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTTCCGAACCACTTCTGTCATGTTTTC +
Preference number: 2 (lower is better)
Translates to: PLFQKPFFTCLLQLH*SFLNAFPNHFCHVF
Trigger: GAAAACATGACAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTCTGGAAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR TCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACCAGTCTCGCCTCTGTaGAGTGTTGCAGAGAACCTG +
Preference number: 2 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRPVSPL*SVAENL
Trigger: CAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGG...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp CGATCTCAGCTCCCTGTAGCCTTGACCTCTCTGGGCTCAAGTGATTTTTCTCTCGGGGTCTCACTGTGTTaGCCAGGGTGGTTTCAAAAT +
Preference number: 2 (lower is better)
Translates to: RSQLPVALTSLGSSDFSLGVSLC*PGWFQN
Trigger: ATTTTGAAACCACCCTGGGCAACACAGTGAGACCCC...GAGAGAAAAATCACTTGAGCCCAGAGAGGTCAAGGCTACAGGGAGCTGAGATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535621.6
3UTR-3UTR GCA 90 bp CTTGAGCTTCCTGAATGCCTTTCCGAACCACTTCTGTCATGTTTTCCAGAAGCCCGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: LELPECLSEPLLSCFPEARCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...GGCTTCTGGAAAACATGACAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR CCA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTAGGAGAAATGGCCTTGTaGCAGAGGACAGTCCCAGAC +
Preference number: 2 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLGEMAL*QRTVPD
Trigger: GTCTGGGACTGTCCTCTGCCACAAGGCCATTTCTCC...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTAGGAGAAATGGCCTTGTaGCAGAGGACAGTCCCAGAC +
Preference number: 2 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLGEMAL*QRTVPD
Trigger: GTCTGGGACTGTCCTCTGCCACAAGGCCATTTCTCC...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR TCA 90 bp TTGTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 2 (lower is better)
Translates to: LWQRTVPDSSLATAQVDTVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...TGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGAGCCTCTGTGAAGTGTTaGAGAGAACCTGGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRASVKC*REPGEC
Trigger: GCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGC...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTAGCCTCTGTGAAGTGTTaGAGAGAACCTGGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLASVKC*REPGEC
Trigger: GCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGC...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CCA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTGTGTTGCAGAGAACCTaGAGAGTGCTAATGAAAAGC +
Preference number: 2 (lower is better)
Translates to: TQYFGKVGTGSASELLLTVLQRT*RVLMKS
Trigger: GCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACAC...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR TCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGAGCTGGGGAGGGCTTCTaGTGCTCTTATTTACAATCC +
Preference number: 2 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRAGEGF*CSYLQS
Trigger: GGATTGTAAATAAGAGCATCAGAAGCCCTCCCCAGC...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR TCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTAGCTGGGGAGGGCTTCTaGTGCTCTTATTTACAATCC +
Preference number: 2 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLAGEGF*CSYLQS
Trigger: GGATTGTAAATAAGAGCATCAGAAGCCCTCCCCAGC...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCTCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 2 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCAGCCTCTGTGAAGTGTTaGAGAGAACCTGGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPASVKC*REPGEC
Trigger: GCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGC...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTAGTCCCACTGTATATTaGAACTTGATCGTACTAAAG +
Preference number: 2 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPSPTVY*NLIVLK
Trigger: CTTTAGTACGATCAAGTTGCAATATACAGTGGGACT...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CCA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACACAGATTTTAACCAGGTaGGTGCTACGTAGCACACGG +
Preference number: 2 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTQILTR*VLRSTR
Trigger: CCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR TCA 90 bp GCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTAGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 2 (lower is better)
Translates to: AVLRKSRNGQCQRASTDLVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...TAAGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR TCA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATCCAGTCTCGCCTCTGTaGAGTGTTGCAGAGAACCTG +
Preference number: 2 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYPVSPL*SVAENL
Trigger: CAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGG...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR TCA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTTCCAGAAACCCAGTGTaGATTTTCCCATTTTCAGGT +
Preference number: 2 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGSRNPV*IFPFSG
Trigger: ACCTGAAAATGGGAAAATTCACACTGGGTTTCTGGA...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
3UTR CAA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTaGCAGAGAACCTGGAGAGTGCTAATGAAAAGCTGTTTTACCAAA +
Preference number: 2 (lower is better)
Translates to: KTDSKGYSQSRLCEV*QRTWRVLMKSCFTK
Trigger: TTTGGTAAAACAGCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 2 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR TCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCAGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 2 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
3UTR-3UTR TCA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 2 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCEVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTATCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 2 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR GCA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACATCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 2 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR TCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 2 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
3UTR-3UTR GCA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCGCCTCTGTGAAGTGTTaGAGAGAACCTGGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: YLLYFIAPNREDCLIICTASVKC*REPGEC
Trigger: GCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGC...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CCA 90 bp AGCACACGGAAGAGCAAGCTCTTAAGGGTAGCATCTATCAGGTTTTCAGATACTGTGTTGCAGAGAACCTaGAGAGTGCTAATGAAAAGC +
Preference number: 2 (lower is better)
Translates to: STRKSKLLRVASIRFSDTVLQRT*RVLMKS
Trigger: GCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACAC...AGTATCTGAAAACCTGATAGATGCTACCCTTAAGAGCTTGCTCTTCCGTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR CAA 90 bp CTACGAAGTCTTCATATCGAGAATGAATGGCAAGCCTACATATCTTaGCAAGTCCTTCTCTTTCCTCTTCGTGGAAATAAGCACACCCAT +
Preference number: 2 (lower is better)
Translates to: LRSLHIENEWQAYIS*QVLLFPLRGNKHTH
Trigger: ATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565362.5
3UTR-3UTR GCA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 2 (lower is better)
Translates to: PHILRLMFRKSKGATGRHSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
3UTR CAA 90 bp AACAAAGATACTTTGACATCTTTATCACAGCAGGGGACAGTAAGGTaGGCTTCTCTAATGCCCACCATCTTGTGTTTTCAGAATCTTTCC +
Preference number: 2 (lower is better)
Translates to: NKDTLTSLSQQGTVR*ASLMPTILCFQNLS
Trigger: GGAAAGATTCTGAAAACACAAGATGGTGGGCATTAGAGAAGCCAACCTTACTGTCCCCTGCTGTGATAAAGATGTCAAAGTATCTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
3UTR-3UTR TCA 90 bp GGCAAGCCTACATATCTTTGCAAGTCCTTCTCTTTCCTCTTCGTGGAAATAAGCATATTTTGGATTACTTaGAAAGAGAAGCTGCCAGGT +
Preference number: 2 (lower is better)
Translates to: GKPTYLCKSFSFLFVEISIFWIT*KEKLPG
Trigger: ACCTGGCAGCTTCTCTTTTCAAGTAATCCAAAATAT...GCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565362.5
3UTR-3UTR GCA 90 bp AGCACACGGAAGAGCAAGCTCTTAAGGGTAGCATCTATCAGGTTTTCAGATACTAGTCCCACTGTATATTaGAACTTGATCGTACTAAAG +
Preference number: 2 (lower is better)
Translates to: STRKSKLLRVASIRFSDTSPTVY*NLIVLK
Trigger: CTTTAGTACGATCAAGTTGCAATATACAGTGGGACT...AGTATCTGAAAACCTGATAGATGCTACCCTTAAGAGCTTGCTCTTCCGTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR GCA 72 bp CCGTCTCAGCTCCCACGGTGCTGTGTTACCGGCGTGTaGCCCAGTGCCTGGCCGTCTTGGAGGTCTTGTTTC +
Preference number: 3 (lower is better)
Translates to: PSQLPRCCVTGV*PSAWPSWRSCF
Trigger: GAAACAAGACCTCCAAGACGGCCAGGCACTGGGGCACACGCCGGTAACACAGCACCGTGGGAGCTGAGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535621.6
3UTR CCA 72 bp TCGAGTTCTCCTCTATCTCCCGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAGCATCGACGTTGTCGC +
Preference number: 3 (lower is better)
Translates to: SSSPLSPGLWPQ*SPRAQQHRRCR
Trigger: GCGACAACGTCGATGCTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAGAGGAGAACTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR CCA 72 bp TGGAAGCCTCTGCTTGGTGCGACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGCACCTTGTGCTTTGTA +
Preference number: 3 (lower is better)
Translates to: WKPLLGATARGR*RQRDSCTLCFV
Trigger: TACAAAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR CAA 90 bp CCTGGACCGGAGAAAACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCATCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 3 (lower is better)
Translates to: PGPEKTNSARSPLQGSAASAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...TGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTTCTCCGGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR CCA 72 bp CAGCGAGCTTCTACTGACTTAAGCAGGGTGCCCGGCTaGATCAGCGTGAGAGAGTGCTCTGCTGGCTCCTGT +
Preference number: 3 (lower is better)
Translates to: QRASTDLSRVPG*ISVRECSAGSC
Trigger: ACAGGAGCCAGCAGAGCACTCTCTCACGCTGATCCAGCCGGGCACCCTGCTTAAGTCAGTAGAAGCTCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp TGGTTTCAAAATCCTGGGCTCAGGCGATCCTTCCGTCTCAGCTCCCACGGTGCTCAGTGCCTGGCCGTCTaGGAGGTCTTGTTTCTCTGG +
Preference number: 3 (lower is better)
Translates to: WFQNPGLRRSFRLSSHGAQCLAV*EVLFLW
Trigger: CCAGAGAAACAAGACCTCCAAGACGGCCAGGCACTG...AGCACCGTGGGAGCTGAGACGGAAGGATCGCCTGAGCCCAGGATTTTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535621.6
3UTR TCA 72 bp GCTTGGTGCGACTGCCCGAGGGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTTTGTAGACATATATGG +
Preference number: 3 (lower is better)
Translates to: AWCDCPRALEAA*LLHLVLCRHIW
Trigger: CCATATATGTCTACAAAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGCACCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR CAA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTGCTCCTGTTTCTGAGTaGGGCCCAGGCGAGCTGCCA +
Preference number: 3 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGAPVSE*GPGELP
Trigger: TGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAGC...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
3UTR GCA 72 bp CCGCAACACCCCCTCTTCCAGAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTGAGCTTCCTGAATGCC +
Preference number: 3 (lower is better)
Translates to: PQHPLFQKPFFT*LLQLHLSFLNA
Trigger: GGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTCTGGAAGAGGGGGTGTTGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR CAA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACATGGGAGAAATGGCCTaGTGGCAGAGGACAGTCCCA +
Preference number: 3 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDMGEMA*WQRTVP
Trigger: TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCAT...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGGCTCCTGTTTCTGAGTaGGGCCCAGGCGAGCTGCCA +
Preference number: 3 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTAPVSE*GPGELP
Trigger: TGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAGC...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR GCA 72 bp GAAAACCAATTCAGCACGGAGCCCACTACAGGGATCTaGCGCAACACCCCCTCTTCCAGAAGCCGTTCTTCA +
Preference number: 3 (lower is better)
Translates to: ENQFSTEPTTGI*RNTPSSRSRSS
Trigger: TGAAGAACGGCTTCTGGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR GCA 72 bp CGAGGGCGTTGGAGGCAGCGTGACTCCTGCACCTTGTaGTTTGTAGACATATATGGGTTCTGTGGACTCCAG +
Preference number: 3 (lower is better)
Translates to: RGRWRQRDSCTL*FVDIYGFCGLQ
Trigger: CTGGAGTCCACAGAACCCATATATGTCTACAAAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGCCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR CAA 90 bp AGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCACCTTTTCTAAGTCTTCAGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTT +
Preference number: 3 (lower is better)
Translates to: RVICSGPLDRRSTFSKSSEAVLH*PSAAPL
Trigger: AAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTC...TGAAGACTTAGAAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR CAA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTCGCCTCTGTGAAGTGTaGCAGAGAACCTGGAGAGTG +
Preference number: 3 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGRLCEV*QRTWRV
Trigger: CACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCG...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
3UTR-3UTR CAA 90 bp CTTGAGCTTCCTGAATGCCTTTCCGAACCACTTCTGTCATGTTTTCCAGAAGCCTCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 3 (lower is better)
Translates to: LELPECLSEPLLSCFPEASAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...GGCTTCTGGAAAACATGACAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR CAA 90 bp AAAACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCTTCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 3 (lower is better)
Translates to: KTNSARSPLQGSAATPPLLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...AAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR TCA 72 bp TCAGCTCCCTGTAGCCTTGACCTCTCTGGGCTCAAGTaGTTTTTCTCTCCTCTACCTCCCGAGTACTTGGGA +
Preference number: 3 (lower is better)
Translates to: SAPCSLDLSGLK*FFSPLPPEYLG
Trigger: TCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAGAGGTCAAGGCTACAGGGAGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535621.6
3UTR-3UTR CAA 90 bp CAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTAAGGATGGGAGAAATGGCCTaGTGGCAGAGGACAGTCCCA +
Preference number: 3 (lower is better)
Translates to: QILTRWVLRSTRKSKLLRMGEMA*WQRTVP
Trigger: TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCAT...CCTTAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACGCCTCTGTGAAGTGTaGCAGAGAACCTGGAGAGTG +
Preference number: 3 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRRLCEV*QRTWRV
Trigger: CACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCG...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR TCA 72 bp GACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTaGAGTGTTGCAGAGAACCTGGAGAGTGCTAATGAA +
Preference number: 3 (lower is better)
Translates to: DRQQRIQPVSPL*SVAENLESANE
Trigger: TTCATTAGCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR CCA 72 bp TCGGTAATAACGGGCAGAGGAGAACCTACCTCTCACTaGTCTATCGGCAGCTATTTCAGGTACGTGGGTAAG +
Preference number: 3 (lower is better)
Translates to: SVITGRGEPTSH*SIGSYFRYVGK
Trigger: CTTACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCTGCCCGTTATTACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
3UTR-3UTR CAA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 3 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDCFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp GTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCAGTCCCACTGTATATaGCAACTTGATCGTACTAAA +
Preference number: 3 (lower is better)
Translates to: VAEDSPRQQPCHSSSRHSQSHCI*QLDRTK
Trigger: TTTAGTACGATCAAGTTGCAATATACAGTGGGACTG...ACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp AAAGCATCTGAACCTCGCAGGGACCTTTTAAAAGGCTTCTGGCCTGGAAGCCTCCGTGACTCCTGCACCTaGTGCTTTGTAGACATATAT +
Preference number: 3 (lower is better)
Translates to: KASEPRRDLLKGFWPGSLRDSCT*CFVDIY
Trigger: ATATATGTCTACAAAGCACAAGGTGCAGGAGTCACG...GAGGCTTCCAGGCCAGAAGCCTTTTAAAAGGTCCCTGCGAGGTTCAGATGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR-3UTR CAA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATCGCCTCTGTGAAGTGTaGCAGAGAACCTGGAGAGTG +
Preference number: 3 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYRLCEV*QRTWRV
Trigger: CACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCG...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATCGCCTCTGTGAAGTGTaGCAGAGAACCTGGAGAGTG +
Preference number: 3 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYRLCEV*QRTWRV
Trigger: CACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCG...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp GCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTAGAGCACAGTCTGTACTaGTGTGCCAATTTTAAAAGC +
Preference number: 3 (lower is better)
Translates to: AVLRKSRNGQCQRASTDLEHSLY*CANFKS
Trigger: GCTTTTAAAATTGGCACACAAGTACAGACTGTGCTC...TAAGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGCTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 3 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 3 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLCFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGGAGCACAGTCTGTACTaGTGTGCCAATTTTAAAAGC +
Preference number: 3 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTEHSLY*CANFKS
Trigger: GCTTTTAAAATTGGCACACAAGTACAGACTGTGCTC...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 3 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 3 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGATGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 3 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRCFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGCAGTCCCACTGTATATaGCAACTTGATCGTACTAAA +
Preference number: 3 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTQSHCI*QLDRTK
Trigger: TTTAGTACGATCAAGTTGCAATATACAGTGGGACTG...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCATGGGAGAAATGGCCTaGTGGCAGAGGACAGTCCCA +
Preference number: 3 (lower is better)
Translates to: YLLYFIAPNREDCLIICTMGEMA*WQRTVP
Trigger: TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCAT...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR GCA 72 bp CTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATTaGAACTTGATCGTACTAAAGACCGACAGCAAAGGA +
Preference number: 3 (lower is better)
Translates to: LLSFKSSSPTVY*NLIVLKTDSKG
Trigger: TCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCAATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp TTTCAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTACTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 3 (lower is better)
Translates to: FQILTRWVLRSTRKSKLLLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...TAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp AGTCCCACTGTATATTGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACTGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 3 (lower is better)
Translates to: SPTVYCNLIVLKTDSKGYCFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...GTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCAATATACAGTGGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR-3UTR CAA 90 bp AGCACACGGAAGAGCAAGCTCTTAAGGGTAGCATCTATCAGGTTTTCAGATACTCAGTCCCACTGTATATaGCAACTTGATCGTACTAAA +
Preference number: 3 (lower is better)
Translates to: STRKSKLLRVASIRFSDTQSHCI*QLDRTK
Trigger: TTTAGTACGATCAAGTTGCAATATACAGTGGGACTG...AGTATCTGAAAACCTGATAGATGCTACCCTTAAGAGCTTGCTCTTCCGTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
3UTR CCA 72 bp AGCCATCCACTACGAAGTCTTCATATCGAGAATGAATaGCAAGCCTACATATCTTTGCAAGTCCTTCTCTTT +
Preference number: 3 (lower is better)
Translates to: SHPLRSLHIENE*QAYISLQVLLF
Trigger: AAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565362.5
3UTR-3UTR CAA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 3 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
3UTR GCA 72 bp TTCATATCGAGAATGAATGGCAAGCCTACATATCTTTaGAAGTCCTTCTCTTTCCTCTTCGTGGAAATAAGC +
Preference number: 3 (lower is better)
Translates to: FISRMNGKPTYL*KSFSFLFVEIS
Trigger: GCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565362.5
3UTR-3UTR CAA 90 bp ATATCGAGAATGAATGGCAAGCCTACATATCTTTGCAAGTCCTTCTCTTTCCTCAATATTTTGGATTACTaGAAAAGAGAAGCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: ISRMNGKPTYLCKSFSFLNILDY*KREAAR
Trigger: CCTGGCAGCTTCTCTTTTCAAGTAATCCAAAATATT...GAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565362.5
CDS-3UTR CCA 90 bp TCAGTGCTGCTGGCCTCGAGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCCGGTGTGCTGAGGGCTaGGAGCCCCTGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SVLLASRVICSGPLDRRSRCAEG*EPLGVP
Trigger: AGGGACACCCAGGGGCTCCCAGCCCTCAGCACACCG...GGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCAGCACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp CCCGGGCTGTGGCCGCAATGGTCTCCACGAGCTCAGCAGCATCGACGTTGTCGCGAAGCCTCTGCTTGGTaGGACTGCCCGAGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: PGLWPQWSPRAQQHRRCREASAW*DCPRAL
Trigger: CAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTC...GCGACAACGTCGATGCTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp CCCGGGCTGTGGCCGCAATGGTCTCCACGAGCTCAGCAGCATCGACGTTGTCGCTGGCCTGGAAGCCTCTaGTTGGTGCGACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PGLWPQWSPRAQQHRRCRWPGSL*LVRLPE
Trigger: CTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCA...GCGACAACGTCGATGCTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp AGCCTCTGCTTGGTGCGACTGCCCGAGGGCGTTGGAGGCAGCGTGACTCCTGCAGCCTCGAGGGTGATCTaGTCCGGCCCACTGGATAGG +
Preference number: 4 (lower is better)
Translates to: SLCLVRLPEGVGGSVTPAASRVI*SGPLDR
Trigger: CCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGC...TGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR TCA 90 bp TCAGTGCTGCTGGCCTCGAGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SVLLASRVICSGPLDRRSALEAA*LLHLVL
Trigger: AAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGC...GGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCAGCACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp TCAGTGCTGCTGGCCTCGAGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCCCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SVLLASRVICSGPLDRRSPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...GGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCAGCACTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp AGCCTCTGCTTGGTGCGACTGCCCGAGGGCGTTGGAGGCAGCGTGACTCCTGCACTCAGGGCCATATCTTaGCCACTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLCLVRLPEGVGGSVTPALRAIS*PLPWSG
Trigger: CCCACTCCAGGGCAGTGGGCAAGATATGGCCCTGAG...TGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp TCAGTGCTGCTGGCCTCGAGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCCTATCTCCCGGGCTGTaGCCGCAATGGTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: SVLLASRVICSGPLDRRSLSPGL*PQWSPR
Trigger: TCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAG...GGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCAGCACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp TCTATCTCCCGGGCTGTGGCCGCAATGGTCTCCACGAGCTCAGCAGCATCGACGACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: SISRAVAAMVSTSSAASTTARGR*RQRDSC
Trigger: GCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGT...CGTCGATGCTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR TCA 90 bp AACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCTTCCTGCTGGCCTCGAGGGTaGTCTGCTCCGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: NQFSTEPTTGICRNTPSSCWPRG*SAPAHW
Trigger: CCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCA...GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR TCA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTGTCTGGTCGGTGTGCTaGGGGCTGGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPVWSVC*GLGAPG
Trigger: CCCAGGGGCTCCCAGCCCTCAGCACACCGACCAGAC...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTTGCTGGCCTCGAGGGTaGTCTGCTCCGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPCWPRG*SAPAHW
Trigger: CCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCA...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTCGGTGTGCTGAGGGCTaGGAGCCCCTGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPRCAEG*EPLGVP
Trigger: AGGGACACCCAGGGGCTCCCAGCCCTCAGCACACCG...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCACCTTTTCTAAGTCTTCATGCTGGCCTCGAGGGTaGTCTGCTCCGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: RVICSGPLDRRSTFSKSSCWPRG*SAPAHW
Trigger: CCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCA...TGAAGACTTAGAAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR TCA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTGTCTGGTCGGTGTGCTaGGGGCTGGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TQYFGKVGTGSASELLLTVWSVC*GLGAPG
Trigger: CCCAGGGGCTCCCAGCCCTCAGCACACCGACCAGAC...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ATCCTGGGCTCAGGCGATCCTTCCGTCTCAGCTCCCACGGTGCTGTGTTACCGGCCATATCTTGCCCACTaGCCTGGAGTGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ILGSGDPSVSAPTVLCYRPYLAH*PGVGLE
Trigger: TTCCAGGCCCACTCCAGGGCAGTGGGCAAGATATGG...CCGGTAACACAGCACCGTGGGAGCTGAGACGGAAGGATCGCCTGAGCCCAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR GCA 90 bp CCTGGACCGGAGAAAACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCATGGCCTGGAAGCCTCTaGTTGGTGCGACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PGPEKTNSARSPLQGSAAWPGSL*LVRLPE
Trigger: CTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCA...TGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTTCTCCGGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp CAAAATCCTGGGCTCAGGCGATCCTTCCGTCTCAGCTCCCACGGTGCTGTGTTAGGGACCCCAGGCGCATaGCGCCATGCCTGGCTAATG +
Preference number: 4 (lower is better)
Translates to: QNPGLRRSFRLSSHGAVLGTPGA*RHAWLM
Trigger: CATTAGCCAGGCATGGCGGCATGCGCCTGGGGTCCC...TAACACAGCACCGTGGGAGCTGAGACGGAAGGATCGCCTGAGCCCAGGATTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR CCA 90 bp GTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: VAEDSPRQQPCHSSSRHSLEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...ACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CCTGGGCTCAGGCGATCCTTCCGTCTCAGCTCCCACGGTGCTGTGTTACCGGCGCTGTGTTGCCCAGGGTaGTTTCAAAATCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PGLRRSFRLSSHGAVLPALCCPG*FQNPGL
Trigger: GAGCCCAGGATTTTGAAACCACCCTGGGCAACACAG...CGCCGGTAACACAGCACCGTGGGAGCTGAGACGGAAGGATCGCCTGAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535621.6
3UTR CAA 72 bp GACCTTTTAAAAGGCTTCTGGCCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGCGTTGGAGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: DLLKGFWPGSLC*VRLPEGVGGSV
Trigger: CACGCTGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR TCA 90 bp AACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCTTCCGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: NQFSTEPTTGICRNTPSSALEAA*LLHLVL
Trigger: AAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGC...GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR TCA 90 bp AGCCTCTGCTTGGTGCGACTGCCCGAGGGCGTTGGAGGCAGCGTGACTCCTGCACTCACTCAAAGCATCTaGACCTCGCAGGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: SLCLVRLPEGVGGSVTPALTQSI*TSQGPF
Trigger: AAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGAG...TGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp TCTATCTCCCGGGCTGTGGCCGCAATGGTCTCCACGAGCTCAGCAGCATCGACGCGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SISRAVAAMVSTSSAASTRCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...CGTCGATGCTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp AGAAAACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCGAAGCCTCTGCTTGGTaGGACTGCCCGAGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: RKPIQHGAHYRDLPQHPLEASAW*DCPRAL
Trigger: CAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTC...GAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp AGGGATCTGCCGCAACACCCCCTCTTCCAGAAGCCGTTCTTCACTTGCCTTCTGGCCTCGAGGGTGATCTaGTCCGGCCCACTGGATAGG +
Preference number: 4 (lower is better)
Translates to: RDLPQHPLFQKPFFTCLLASRVI*SGPLDR
Trigger: CCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGC...CAGAAGGCAAGTGAAGAACGGCTTCTGGAAGAGGGGGTGTTGCGGCAGATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp GTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTTGGGCCCAGGCGAGCTaGCAGGGCAGTAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VAEDSPRQQPCHSSSRHSWAQAS*QGSRSF
Trigger: GAAGCTTCTACTGCCCTGGCAGCTCGCCTGGGCCCA...ACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AAAACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCTTACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: KTNSARSPLQGSAATPPLTARGR*RQRDSC
Trigger: GCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGT...AAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp AAAACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCTTCTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: KTNSARSPLQGSAATPPLLEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...AAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp TTCTCCTCTATCTCCCGGGCTGTGGCCGCAATGGTCTCCACGAGCTCAGCAGCATCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: FSSISRAVAAMVSTSSAASAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...TGCTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAGAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTCGGTGTGCTGAGGGCTaGGAGCCCCTGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PTAKDTASLASVKCCREPRCAEG*EPLGVP
Trigger: AGGGACACCCAGGGGCTCCCAGCCCTCAGCACACCG...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTTGCTGGCCTCGAGGGTaGTCTGCTCCGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGCWPRG*SAPAHW
Trigger: CCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCA...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR TCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACCCGGCTGGATCAGCGTaGGAGAGTGCTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDPAGSA*ESALLA
Trigger: AGCCAGCAGAGCACTCTCTCACGCTGATCCAGCCGG...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFTARGR*RQRDSC
Trigger: GCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGT...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWTARGR*RQRDSC
Trigger: GCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGT...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTCTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: TQYFGKVGTGSASELLLTLEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGTGCTGGCCTCGAGGGTaGTCTGCTCCGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTCWPRG*SAPAHW
Trigger: CCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCA...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACCCAGCGAGCTTCTACTaGCTTAAGCAGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDPASFY*LKQGAR
Trigger: CCGGGCACCCTGCTTAAGTCAGTAGAAGCTCGCTGG...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCTCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGGAAGCCTCTGCTTGGTaGGACTGCCCGAGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWEASAW*DCPRAL
Trigger: CAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTC...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTGGGCCCAGGCGAGCTaGCAGGGCAGTAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: TQYFGKVGTGSASELLLTWAQAS*QGSRSF
Trigger: GAAGCTTCTACTGCCCTGGCAGCTCGCCTGGGCCCA...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCTGGGCCCAGGCGAGCTaGCAGGGCAGTAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFWAQAS*QGSRSF
Trigger: GAAGCTTCTACTGCCCTGGCAGCTCGCCTGGGCCCA...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TGGTTTCAAAATCCTGGGCTCAGGCGATCCTTCCGTCTCAGCTCCCACGGTGCTGTGGGACCACCCTGCTaGGGTCATCAAAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: WFQNPGLRRSFRLSSHGAVGPPC*GHQRAE
Trigger: TTCAGCCCTTTGATGACCGCAGCAGGGTGGTCCCAC...AGCACCGTGGGAGCTGAGACGGAAGGATCGCCTGAGCCCAGGATTTTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR GCA 90 bp AAAGCCTGGACCGGAGAAAACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCTCAGGGCCATATCTTaGCCACTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KAWTGENQFSTEPTTGICLRAIS*PLPWSG
Trigger: CCCACTCCAGGGCAGTGGGCAAGATATGGCCCTGAG...GCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTTCTCCGGTCCAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp CCCGGGCTGTGGCCGCAATGGTCTCCACGAGCTCAGCAGCATCGACGTTGTCGCAAAGGCAGCTCTTCATaGTCTTATACTCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PGLWPQWSPRAQQHRRCRKGSSS*SYTQGH
Trigger: ATGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTT...GCGACAACGTCGATGCTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp TCTGAACCTCGCAGGGACCTTTTAAAAGGCTTCTGGCCTGGAAGCCTCTGCTTGGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SEPRRDLLKGFWPGSLCLGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAGGTCCCTGCGAGGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp CCCTTCTGTAAAGCCTGGACCGGAGAAAACCAATTCAGCACGGAGCCCACTACAGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PFCKAWTGENQFSTEPTTGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...TGTAGTGGGCTCCGTGCTGAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTTCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPSAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp ATCCTGGGCTCAGGCGATCCTTCCGTCTCAGCTCCCACGGTGCTGTGTTACCGGAAGGCAACATCCATCTaGTGCTGGGATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: ILGSGDPSVSAPTVLCYRKATSI*CWDPNT
Trigger: TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTT...CCGGTAACACAGCACCGTGGGAGCTGAGACGGAAGGATCGCCTGAGCCCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR TCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCATGCTGGCCTCGAGGGTaGTCTGCTCCGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQACWPRG*SAPAHW
Trigger: CCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCA...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACTGCTGGCCTCGAGGGTaGTCTGCTCCGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHCWPRG*SAPAHW
Trigger: CCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCA...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTCCAGTCTCGCCTCTGTaGAGTGTTGCAGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPPVSPL*SVAENL
Trigger: CAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGG...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCCAGTCTCGCCTCTGTaGAGTGTTGCAGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVPVSPL*SVAENL
Trigger: CAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGG...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTACCGGCTGGATCAGCGTaGGAGAGTGCTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AVLRKSRNGQCQRASTDLPAGSA*ESALLA
Trigger: AGCCAGCAGAGCACTCTCTCACGCTGATCCAGCCGG...TAAGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTCCGGCTGGATCAGCGTaGGAGAGTGCTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGPAGSA*ESALLA
Trigger: AGCCAGCAGAGCACTCTCTCACGCTGATCCAGCCGG...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR GCA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCATGCTCACCATATCTTaGCCACTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVMLTIS*PLPWSG
Trigger: CCCACTCCAGGGCAGTGGGCAAGATATGGTGAGCAT...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396410.9
ENST00000618389.4
CDS-3UTR GCA 90 bp CAAAATCCTGGGCTCAGGCGATCCTTCCGTCTCAGCTCCCACGGTGCTGTGTTAATGCTCACCATATCTTaGCCACTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QNPGLRRSFRLSSHGAVLMLTIS*PLPWSG
Trigger: CCCACTCCAGGGCAGTGGGCAAGATATGGTGAGCAT...TAACACAGCACCGTGGGAGCTGAGACGGAAGGATCGCCTGAGCCCAGGATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR GCA 90 bp GCTGTGTTACCGGCGTGTGCCCCAGTGCCTGGCCGTCTTGGAGGTCTTGTTTCTTACTGCTGCCGTTCCTaGATTTGCGACAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: AVLPACAPVPGRLGGLVSYCCRS*ICDKQQ
Trigger: CTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTA...AGAAACAAGACCTCCAAGACGGCCAGGCACTGGGGCACACGCCGGTAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR GCA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVRCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTCCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PTAKDTASLASVKCCREPPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TCTGAACCTCGCAGGGACCTTTTAAAAGGCTTCTGGCCTGGAAGCCTCTGCTTGCCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SEPRRDLLKGFWPGSLCLPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAGGTCCCTGCGAGGTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp CGTTGGAGGCAGCGTGACTCCTGCACCTTGTGCTTTGTAGACATATATGGGTTCTCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RWRQRDSCTLCFVDIYGFSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...GAACCCATATATGTCTACAAAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp GCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTATCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: AVLRKSRNGQCQRASTDLSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...TAAGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTCCCTTCTGTAAAGCCTGGACCGGAGAAAACCAATTCAGCACGGAGCCCACTATCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FPSVKPGPEKTNSARSPLSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...TAGTGGGCTCCGTGCTGAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTGAAGCCTCTGCTTGGTaGGACTGCCCGAGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGEASAW*DCPRAL
Trigger: CAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTC...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR GCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAGAAGCCTCTGCTTGGTaGGACTGCCCGAGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQREASAW*DCPRAL
Trigger: CAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTC...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTGCCTCGAGGGTGATCTaGTCCGGCCCACTGGATAGG +
Preference number: 4 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGASRVI*SGPLDR
Trigger: CCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGC...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR GCA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCCCAGACAGCAGCCTTaGCACAGCTCAAGTAGACAC +
Preference number: 4 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVPRQQP*HSSSRH
Trigger: GTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGG...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTATGGGCCCAGGCGAGCTaGCAGGGCAGTAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: AVLRKSRNGQCQRASTDLWAQAS*QGSRSF
Trigger: GAAGCTTCTACTGCCCTGGCAGCTCGCCTGGGCCCA...TAAGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TCTATCTCCCGGGCTGTGGCCGCAATGGTCTCCACGAGCTCAGCAGCATCGACGCCCTTCTGTAAAGCCTaGACCGGAGAAAACCAATTC +
Preference number: 4 (lower is better)
Translates to: SISRAVAAMVSTSSAASTPFCKA*TGENQF
Trigger: GAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGG...CGTCGATGCTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp CAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTAAGGCTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: QILTRWVLRSTRKSKLLRLEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...CCTTAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AGAAAACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCAAAAGGCTTCTGGCCTaGAAGCCTCTGCTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: RKPIQHGAHYRDLPQHPLKRLLA*KPLLGA
Trigger: CGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTT...GAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp AAAACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCTTTCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: KTNSARSPLQGSAATPPLSAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...AAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp GAATGCCTTTCCGAACCACTTCTGTCATGTTTTCCAGAAGCCTCGAGTTCTCCTCGGTGTGCTGAGGGCTaGGAGCCCCTGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: ECLSEPLLSCFPEASSSPRCAEG*EPLGVP
Trigger: AGGGACACCCAGGGGCTCCCAGCCCTCAGCACACCG...AGGAGAACTCGAGGCTTCTGGAAAACATGACAGAAGTGGTTCGGAAAGGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACGGTGTGCTGAGGGCTaGGAGCCCCTGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRRCAEG*EPLGVP
Trigger: AGGGACACCCAGGGGCTCCCAGCCCTCAGCACACCG...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCTGTGGGACCCCTTTCTaGAAGGCCTCGGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFCGTPF*KASVWS
Trigger: CGACCAGACCGAGGCCTTCCAGAAAGGGGTCCCACA...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCGTCATCTTCTGGGTGTaGGACCCCTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVVIFWV*DPFLEG
Trigger: GCCTTCCAGAAAGGGGTCCCACACCCAGAAGATGAC...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCGGAGAAATGGCCTTGTaGCAGAGGACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVGEMAL*QRTVPD
Trigger: GTCTGGGACTGTCCTCTGCCACAAGGCCATTTCTCC...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTCTCCTGTTTCTGAGTTaGGCCCAGGCGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TQYFGKVGTGSASELLLTLLFLS*AQASCQ
Trigger: CTGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAG...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTCTGGGCTCAAGTGATTTTTCTCTCCTCTACCTCCCGAGTACTTGGGACCCCAGTGTGCCCCAGTGCCTaGCCGTCTTGGAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LWAQVIFLSSTSRVLGTPVCPSA*PSWRSC
Trigger: ACAAGACCTCCAAGACGGCCAGGCACTGGGGCACAC...TGGGGTCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535621.6
3UTR CAA 72 bp GCCGCAACACCCCCTCTTCCAGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTTGAGCTTCCTGAATGC +
Preference number: 4 (lower is better)
Translates to: AATPPLPEAVLH*PSAAPLELPEC
Trigger: GCATTCAGGAAGCTCAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTCTGGAAGAGGGGGTGTTGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
3UTR CAA 72 bp GCCCGAGGGCGTTGGAGGCAGCGTGACTCCTGCACCTaGTGCTTTGTAGACATATATGGGTTCTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: ARGRWRQRDSCT*CFVDIYGFCGL
Trigger: GAGTCCACAGAACCCATATATGTCTACAAAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGCCCTCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR TCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRALEAA*LLHLVL
Trigger: AAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGC...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTGTCTGGTCGGTGTGCTaGGGGCTGGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFVWSVC*GLGAPG
Trigger: CCCAGGGGCTCCCAGCCCTCAGCACACCGACCAGAC...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTAAGGGCTGGCTCCTGTTTCTaGGTTGGGCCCAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: QILTRWVLRSTRKSKLLRAGSCF*VGPRRA
Trigger: AGCTCGCCTGGGCCCAACTCAGAAACAGGAGCCAGC...CCTTAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp ACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGACCAGCGAGCTTCTACTaGCTTAAGCAGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TAKDTASLASVKCCREPGPASFY*LKQGAR
Trigger: CCGGGCACCCTGCTTAAGTCAGTAGAAGCTCGCTGG...TCCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CTCTGGGCTCAAGTGATTTTTCTCTCCTCTACCTCCCGAGTACTTGGGACCCCACCAGCTGGAGTACAGTaGTGCGATCTCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LWAQVIFLSSTSRVLGTPPAGVQ*CDLSSL
Trigger: CAGGGAGCTGAGATCGCATCACTGTACTCCAGCTGG...TGGGGTCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR GCA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGCCATATCTTGCCCACTaGCCTGGAGTGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWPYLAH*PGVGLE
Trigger: TTCCAGGCCCACTCCAGGGCAGTGGGCAAGATATGG...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396410.9
ENST00000618389.4
CDS-3UTR GCA 90 bp TCTGAACCTCGCAGGGACCTTTTAAAAGGCTTCTGGCCTGGAAGCCTCTGCTTGCCATATCTTGCCCACTaGCCTGGAGTGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SEPRRDLLKGFWPGSLCLPYLAH*PGVGLE
Trigger: TTCCAGGCCCACTCCAGGGCAGTGGGCAAGATATGG...CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAGGTCCCTGCGAGGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp TTGTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAATGCTCACCATATCTTaGCCACTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LWQRTVPDSSLATAQVDTMLTIS*PLPWSG
Trigger: CCCACTCCAGGGCAGTGGGCAAGATATGGTGAGCAT...TGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396410.9
ENST00000618389.4
CDS-3UTR GCA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTTGTGTGTCCTACTGCTaGCGTTCCTGCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPCVSYC*RSCICD
Trigger: GTCGCAAATGCAGGAACGGCAGCAGTAGGACACACA...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACCGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDRCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCTTCCAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: NQFSTEPTTGICRNTPSSKPFFT*LLQLHL
Trigger: CAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTT...GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp CGCAATGGTCTCCACGAGCTCAGCAGCATCGACGTTGTCGCTCGCCATGCCGACGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: RNGLHELSSIDVVARHADDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...GTCGGCATGGCGAGCGACAACGTCGATGCTGCTGAGCTCGTGGAGACCATTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGTCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGGCCTGGAAGCCTCTaGTTGGTGCGACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLWPGSL*LVRLPE
Trigger: CTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCA...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACCCCAGACAGCAGCCTTaGCACAGCTCAAGTAGACAC +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDPRQQP*HSSSRH
Trigger: GTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGG...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTGTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACACCCAGACAGCAGCCTTaGCACAGCTCAAGTAGACAC +
Preference number: 4 (lower is better)
Translates to: LWQRTVPDSSLATAQVDTPRQQP*HSSSRH
Trigger: GTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGG...TGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GATTTTTCTCTCCTCTACCTCCCGAGTACTTGGGACCCCAGGCGCATGCCGCCAGGGGTCTCACTGTGTTaGCCAGGGTGGTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: DFSLLYLPSTWDPRRMPPGVSLC*PGWFQN
Trigger: ATTTTGAAACCACCCTGGGCAACACAGTGAGACCCC...TGGCGGCATGCGCCTGGGGTCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR CCA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VLKTDSKGYSQSRLCEVLGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...CAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AGAAGCCTCGAGTTCTCCTCTATCTCCCGGGCTGTGGCCGCAATGGTCTCCACGCCCTTCTGTAAAGCCTaGACCGGAGAAAACCAATTC +
Preference number: 4 (lower is better)
Translates to: RSLEFSSISRAVAAMVSTPFCKA*TGENQF
Trigger: GAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGG...CGTGGAGACCATTGCGGCCACAGCCCGGGAGATAGAGGAGAACTCGAGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGAACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRTARGR*RQRDSC
Trigger: GCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGT...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACAACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTTARGR*RQRDSC
Trigger: GCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGT...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHTARGR*RQRDSC
Trigger: GCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGT...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQALEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTTGAGCTTCCTGAATGCCTTTCCGAACCACTTCTGTCATGTTTTCCAGAAGCCCTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LELPECLSEPLLSCFPEALEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...GGCTTCTGGAAAACATGACAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACCTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHLEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCAGCAGGGTGCCCGGCTaGATCAGCGTGAGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLSRVPG*ISVREC
Trigger: GCACTCTCTCACGCTGATCCAGCCGGGCACCCTGCT...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTAAGGAGCAGGGTGCCCGGCTaGATCAGCGTGAGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: QILTRWVLRSTRKSKLLRSRVPG*ISVREC
Trigger: GCACTCTCTCACGCTGATCCAGCCGGGCACCCTGCT...CCTTAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TCCTGGGCTCAGGCGATCCTTCCGTCTCAGCTCCCACGGTGCTGTGTTACCGGCTCTTCATATCGAGAATaGATGGCAAGCCTACATATC +
Preference number: 4 (lower is better)
Translates to: SWAQAILPSQLPRCCVTGSSYRE*MASLHI
Trigger: GATATGTAGGCTTGCCATTCATTCTCGATATGAAGA...GCCGGTAACACAGCACCGTGGGAGCTGAGACGGAAGGATCGCCTGAGCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR TCA 90 bp TCTGCCGCAACACCCCCTCTTCCAGAAGCCGTTCTTCACTTGCCTTCTGCAGCTCTCACTCAAAGCATCTaGACCTCGCAGGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: SAATPPLPEAVLHLPSAALTQSI*TSQGPF
Trigger: AAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGAG...AGCTGCAGAAGGCAAGTGAAGAACGGCTTCTGGAAGAGGGGGTGTTGCGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR TCA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACGTCTGGTCGGTGTGCTaGGGGCTGGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PHILRLMFRKSKGATGRHVWSVC*GLGAPG
Trigger: CCCAGGGGCTCCCAGCCCTCAGCACACCGACCAGAC...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATGTCTGGTCGGTGTGCTaGGGGCTGGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYVWSVC*GLGAPG
Trigger: CCCAGGGGCTCCCAGCCCTCAGCACACCGACCAGAC...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTCGGTCCTTCTACCTGTaGGTGGTCATCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TQYFGKVGTGSASELLLTRSFYL*VVIFWV
Trigger: CACCCAGAAGATGACCACTCACAGGTAGAAGGACCG...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACAGCTGGCTCCTGTTTCTaGGTTGGGCCCAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTAGSCF*VGPRRA
Trigger: AGCTCGCCTGGGCCCAACTCAGAAACAGGAGCCAGC...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTAGCTGGCTCCTGTTTCTaGGTTGGGCCCAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLAGSCF*VGPRRA
Trigger: AGCTCGCCTGGGCCCAACTCAGAAACAGGAGCCAGC...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTAGCTGGCTCCTGTTTCTaGGTTGGGCCCAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLAGSCF*VGPRRA
Trigger: AGCTCGCCTGGGCCCAACTCAGAAACAGGAGCCAGC...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCCCAGCGAGCTTCTACTaGCTTAAGCAGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLPASFY*LKQGAR
Trigger: CCGGGCACCCTGCTTAAGTCAGTAGAAGCTCGCTGG...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCTACTGCTGCCGTTCCTaGATTTGCGACAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVYCCRS*ICDKQQ
Trigger: CTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTA...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTGTGTGTCCTACTGCTaGCGTTCCTGCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDCVSYC*RSCICD
Trigger: GTCGCAAATGCAGGAACGGCAGCAGTAGGACACACA...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGCGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWRCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCTTCCCTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: NQFSTEPTTGICRNTPSSLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp AGGGATCTGCCGCAACACCCCCTCTTCCAGAAGCCGTTCTTCACTTGCCTTCTGAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: RDLPQHPLFQKPFFTCLLKPFFT*LLQLHL
Trigger: CAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTT...CAGAAGGCAAGTGAAGAACGGCTTCTGGAAGAGGGGGTGTTGCGGCAGATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGCCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACTCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGAGAAGCCTCTGCTTGGTaGGACTGCCCGAGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLREASAW*DCPRAL
Trigger: CAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTC...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGATGGCCTGGAAGCCTCTaGTTGGTGCGACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRWPGSL*LVRLPE
Trigger: CTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCA...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAATGGCCTGGAAGCCTCTaGTTGGTGCGACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCEWPGSL*LVRLPE
Trigger: CTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCA...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCATGGCCTGGAAGCCTCTaGTTGGTGCGACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAWPGSL*LVRLPE
Trigger: CTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCA...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACAGCCTCGAGGGTGATCTaGTCCGGCCCACTGGATAGG +
Preference number: 4 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTASRVI*SGPLDR
Trigger: CCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGC...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTAGCCTCGAGGGTGATCTaGTCCGGCCCACTGGATAGG +
Preference number: 4 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLASRVI*SGPLDR
Trigger: CCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGC...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACGCCTCGAGGGTGATCTaGTCCGGCCCACTGGATAGG +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHASRVI*SGPLDR
Trigger: CCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGC...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTAGCCTCGAGGGTGATCTaGTCCGGCCCACTGGATAGG +
Preference number: 4 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLASRVI*SGPLDR
Trigger: CCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGC...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAATGGGCCCAGGCGAGCTaGCAGGGCAGTAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCEWAQAS*QGSRSF
Trigger: GAAGCTTCTACTGCCCTGGCAGCTCGCCTGGGCCCA...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTAACTCTTCACGCAACTaGAGCGTACAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: VAEDSPRQQPCHSSSRHSNSSRN*SVQHST
Trigger: AGTGCTGTGCTGTACGCTCCAGTTGCGTGAAGAGTT...ACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCAGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCCTATCTCCCGGGCTGTaGCCGCAATGGTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLLSPGL*PQWSPR
Trigger: TCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAG...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTAAGGCTATCTCCCGGGCTGTaGCCGCAATGGTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: QILTRWVLRSTRKSKLLRLSPGL*PQWSPR
Trigger: TCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAG...CCTTAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTGTGGCCGCAATGGTCTCCACGAGCTCAGCAGCATCGACGTTGTCGCTCGCCACTTTGTAGACATATATaGGTTCTGTGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LWPQWSPRAQQHRRCRSPLCRHI*VLWTPE
Trigger: CTCTGGAGTCCACAGAACCCATATATGTCTACAAAG...TGGCGAGCGACAACGTCGATGCTGCTGAGCTCGTGGAGACCATTGCGGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGATCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRSAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGTGTGGGACCCCTTTCTaGAAGGCCTCGGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTCGTPF*KASVWS
Trigger: CGACCAGACCGAGGCCTTCCAGAAAGGGGTCCCACA...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGGTCATCTTCTGGGTGTaGGACCCCTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWVIFWV*DPFLEG
Trigger: GCCTTCCAGAAAGGGGTCCCACACCCAGAAGATGAC...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACCCTTCTACCTGTGAGTaGTCATCTTCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDPSTCE*SSSGCG
Trigger: CCCACACCCAGAAGATGACCACTCACAGGTAGAAGG...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCAGATTTTAACCAGGTaGGTGCTACGTAGCACACGG +
Preference number: 4 (lower is better)
Translates to: VAEDSPRQQPCHSSSRHSQILTR*VLRSTR
Trigger: CCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG...ACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCCTCCTGTTTCTGAGTTaGGCCCAGGCGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLLLFLS*AQASCQ
Trigger: CTGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAG...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGAAGCAGGGTGCCCGGCTaGATCAGCGTGAGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRSRVPG*ISVREC
Trigger: GCACTCTCTCACGCTGATCCAGCCGGGCACCCTGCT...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGATGCAGGCTACGAGCTaGTCCACATCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTMQATS*STSSPR
Trigger: TCGGGGAGAGGATGTGGATCAGCTCGTAGCCTGCAT...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGATGCAGGCTACGAGCTaGTCCACATCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLMQATS*STSSPR
Trigger: TCGGGGAGAGGATGTGGATCAGCTCGTAGCCTGCAT...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCAGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAALEAA*LLHLVL
Trigger: AAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGC...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGACGGTCCTTCTACCTGTaGGTGGTCATCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TAKDTASLASVKCCREPGRSFYL*VVIFWV
Trigger: CACCCAGAAGATGACCACTCACAGGTAGAAGGACCG...TCCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp ACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGACCAGTCTCGCCTCTGTaGAGTGTTGCAGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: TAKDTASLASVKCCREPGPVSPL*SVAENL
Trigger: CAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGG...TCCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TTGTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGCTGGGGAGGGCTTCTaGTGCTCTTATTTACAATCC +
Preference number: 4 (lower is better)
Translates to: LWQRTVPDSSLATAQVDTAGEGF*CSYLQS
Trigger: GGATTGTAAATAAGAGCATCAGAAGCCCTCCCCAGC...TGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGCCGGCTGGATCAGCGTaGGAGAGTGCTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQPAGSA*ESALLA
Trigger: AGCCAGCAGAGCACTCTCTCACGCTGATCCAGCCGG...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACCAGCGAGCTTCTACTaGCTTAAGCAGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRPASFY*LKQGAR
Trigger: CCGGGCACCCTGCTTAAGTCAGTAGAAGCTCGCTGG...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CCTCTCTGGGCTCAAGTGATTTTTCTCTCCTCTACCTCCCGAGTACTTGGGACCTGTGTGTCCTACTGCTaGCGTTCCTGCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: PLWAQVIFLSSTSRVLGTCVSYC*RSCICD
Trigger: GTCGCAAATGCAGGAACGGCAGCAGTAGGACACACA...GGTCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR GCA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTGCAGTTTGCTTTCTATaGAGGCTACGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPAVCFL*RLRADP
Trigger: TGGATCAGCTCGTAGCCTGCATAGAAAGCAAACTGC...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGACGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRRCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTGTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: LWQRTVPDSSLATAQVDTKPFFT*LLQLHL
Trigger: CAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTT...TGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAACCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCEPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACCCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCATCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGTCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGAAGCCTCTGCTTGGTaGGACTGCCCGAGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQEASAW*DCPRAL
Trigger: CAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTC...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp TTTCAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTATGGCCTGGAAGCCTCTaGTTGGTGCGACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FQILTRWVLRSTRKSKLLWPGSL*LVRLPE
Trigger: CTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCA...TAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGATCAGCGTGAGAGAGTaGTCTGCTGGCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWISVRE*SAGSCF
Trigger: GAAACAGGAGCCAGCAGAGCACTCTCTCACGCTGAT...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCTTCCAAAGGCAGCTCTTCATaGTCTTATACTCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: NQFSTEPTTGICRNTPSSKGSSS*SYTQGH
Trigger: ATGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTT...GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACAACTCTTCACGCAACTaGAGCGTACAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDNSSRN*SVQHST
Trigger: AGTGCTGTGCTGTACGCTCCAGTTGCGTGAAGAGTT...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TTGTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACATTCAGGAGTCCAGCATaGATGTTTTCCCCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: LWQRTVPDSSLATAQVDTFRSPA*MFSPSG
Trigger: TCCCGAAGGGGAAAACATCCATGCTGGACTCCTGAA...TGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACTATCTCCCGGGCTGTaGCCGCAATGGTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQALSPGL*PQWSPR
Trigger: TCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAG...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACTATCTCCCGGGCTGTaGCCGCAATGGTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLLSPGL*PQWSPR
Trigger: TCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAG...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTGAGCTTCCTGAATGCCTTTCCGAACCACTTCTGTCATGTTTTCCAGAAGCCCTATCTCCCGGGCTGTaGCCGCAATGGTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: LELPECLSEPLLSCFPEALSPGL*PQWSPR
Trigger: TCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAG...GGCTTCTGGAAAACATGACAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFTARGR*RQRDSC
Trigger: GCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGT...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTCTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFLEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACCGGTGTGCTGAGGGCTaGGAGCCCCTGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PHILRLMFRKSKGATGRHRCAEG*EPLGVP
Trigger: AGGGACACCCAGGGGCTCCCAGCCCTCAGCACACCG...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTATGTGGGACCCCTTTCTaGAAGGCCTCGGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLCGTPF*KASVWS
Trigger: CGACCAGACCGAGGCCTTCCAGAAAGGGGTCCCACA...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACTGTGGGACCCCTTTCTaGAAGGCCTCGGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHCGTPF*KASVWS
Trigger: CGACCAGACCGAGGCCTTCCAGAAAGGGGTCCCACA...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTGTCATCTTCTGGGTGTaGGACCCCTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGVIFWV*DPFLEG
Trigger: GCCTTCCAGAAAGGGGTCCCACACCCAGAAGATGAC...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CCA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGCCTTCTACCTGTGAGTaGTCATCTTCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWPSTCE*SSSGCG
Trigger: CCCACACCCAGAAGATGACCACTCACAGGTAGAAGG...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTGGAGAAATGGCCTTGTaGCAGAGGACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGGEMAL*QRTVPD
Trigger: GTCTGGGACTGTCCTCTGCCACAAGGCCATTTCTCC...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CCA 90 bp CGATCTCAGCTCCCTGTAGCCTTGACCTCTCTGGGCTCAAGTGATTTTTCTCTCAGTGCCTGGCCGTCTTaGAGGTCTTGTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSQLPVALTSLGSSDFSLSAWPS*RSCFSG
Trigger: CCCAGAGAAACAAGACCTCCAAGACGGCCAGGCACT...GAGAGAAAAATCACTTGAGCCCAGAGAGGTCAAGGCTACAGGGAGCTGAGATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR CCA 90 bp TCTCTGGGCTCAAGTGATTTTTCTCTCCTCTACCTCCCGAGTACTTGGGACCCCCCGTTTCACCCCAGCTaGAGTACAGTGATGCGATCT +
Preference number: 4 (lower is better)
Translates to: SLGSSDFSLLYLPSTWDPPFHPS*STVMRS
Trigger: AGATCGCATCACTGTACTCCAGCTGGGGTGAAACGG...GGGGTCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR TCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCAATGCAGGCTACGAGCTaGTCCACATCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAMQATS*STSSPR
Trigger: TCGGGGAGAGGATGTGGATCAGCTCGTAGCCTGCAT...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTAATGCAGGCTACGAGCTaGTCCACATCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLMQATS*STSSPR
Trigger: TCGGGGAGAGGATGTGGATCAGCTCGTAGCCTGCAT...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCAGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPALEAA*LLHLVL
Trigger: AAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGC...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTCTCACTCAAAGCATCTaGACCTCGCAGGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: TQYFGKVGTGSASELLLTLTQSI*TSQGPF
Trigger: AAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGAG...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCTGCTGGCCTCGAGGGTaGTCTGCTCCGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFCWPRG*SAPAHW
Trigger: CCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCA...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTGCTGGCCTCGAGGGTaGTCTGCTCCGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVCWPRG*SAPAHW
Trigger: CCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTGTCTGGTCGGTGTGCTaGGGGCTGGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSVWSVC*GLGAPG
Trigger: CCCAGGGGCTCCCAGCCCTCAGCACACCGACCAGAC...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTGTCTGGTCGGTGTGCTaGGGGCTGGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFVWSVC*GLGAPG
Trigger: CCCAGGGGCTCCCAGCCCTCAGCACACCGACCAGAC...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGCGGTCCTTCTACCTGTaGGTGGTCATCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVRSFYL*VVIFWV
Trigger: CACCCAGAAGATGACCACTCACAGGTAGAAGGACCG...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AGCACACGGAAGAGCAAGCTCTTAAGGGTAGCATCTATCAGGTTTTCAGATACTGCTGGCTCCTGTTTCTaGGTTGGGCCCAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: STRKSKLLRVASIRFSDTAGSCF*VGPRRA
Trigger: AGCTCGCCTGGGCCCAACTCAGAAACAGGAGCCAGC...AGTATCTGAAAACCTGATAGATGCTACCCTTAAGAGCTTGCTCTTCCGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTTGTGTGTCCTACTGCTaGCGTTCCTGCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGCVSYC*RSCICD
Trigger: GTCGCAAATGCAGGAACGGCAGCAGTAGGACACACA...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR GCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACCTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCACCTTTTCTAAGTCTTCACTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: RVICSGPLDRRSTFSKSSLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...TGAAGACTTAGAAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: PTAKDTASLASVKCCREPKPFFT*LLQLHL
Trigger: CAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTT...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCACCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGCCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTTCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp GCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTAATCAGCGTGAGAGAGTaGTCTGCTGGCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AVLRKSRNGQCQRASTDLISVRE*SAGSCF
Trigger: GAAACAGGAGCCAGCAGAGCACTCTCTCACGCTGAT...TAAGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCAACTCTTCACGCAACTaGAGCGTACAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFNSSRN*SVQHST
Trigger: AGTGCTGTGCTGTACGCTCCAGTTGCGTGAAGAGTT...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACCTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PHILRLMFRKSKGATGRHLEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGAAAAGGCTTCTGGCCTaGAAGCCTCTGCTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTKRLLA*KPLLGA
Trigger: CGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTT...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGAAAAGGCTTCTGGCCTaGAAGCCTCTGCTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVKRLLA*KPLLGA
Trigger: CGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTT...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGATCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRSAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACTCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHSAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCGGTGTGCTGAGGGCTaGGAGCCCCTGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFRCAEG*EPLGVP
Trigger: AGGGACACCCAGGGGCTCCCAGCCCTCAGCACACCG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTCAGATTTTAACCAGGTaGGTGCTACGTAGCACACGG +
Preference number: 4 (lower is better)
Translates to: PTAKDTASLASVKCCREPQILTR*VLRSTR
Trigger: CCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACCAAAAGCTTGACTGCTaGATTAAGAAGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDQKLDC*IKKAQG
Trigger: CCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTG...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTTGTTCTCCAATATTTTaGATTCTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VAEDSPRQQPCHSSSRHSCSPIF*ILPWSG
Trigger: CCCACTCCAGGGCAGAATCCAAAATATTGGAGAACA...ACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569715.5
ENST00000619589.4
CDS-3UTR TCA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTAAGGCAACATCCATCTaGTGCTGGGATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: PTAKDTASLASVKCCREPKATSI*CWDPNT
Trigger: TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTT...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCAATGCAGGCTACGAGCTaGTCCACATCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPMQATS*STSSPR
Trigger: TCGGGGAGAGGATGTGGATCAGCTCGTAGCCTGCAT...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AGCACACGGAAGAGCAAGCTCTTAAGGGTAGCATCTATCAGGTTTTCAGATACTGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: STRKSKLLRVASIRFSDTALEAA*LLHLVL
Trigger: AAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGC...AGTATCTGAAAACCTGATAGATGCTACCCTTAAGAGCTTGCTCTTCCGTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFALEAA*LLHLVL
Trigger: AAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGC...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTTGCTGGCCTCGAGGGTaGTCTGCTCCGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSCWPRG*SAPAHW
Trigger: CCAGTGGGCCGGAGCAGATCACCCTCGAGGCCAGCA...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGGTCTGGTCGGTGTGCTaGGGGCTGGGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQVWSVC*GLGAPG
Trigger: CCCAGGGGCTCCCAGCCCTCAGCACACCGACCAGAC...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACCGGTCCTTCTACCTGTaGGTGGTCATCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHRSFYL*VVIFWV
Trigger: CACCCAGAAGATGACCACTCACAGGTAGAAGGACCG...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp GTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: VAEDSPRQQPCHSSSRHSVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...ACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATGCTGGCTCCTGTTTCTaGGTTGGGCCCAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYAGSCF*VGPRRA
Trigger: AGCTCGCCTGGGCCCAACTCAGAAACAGGAGCCAGC...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AGTCCCACTGTATATTGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACCCGGCTGGATCAGCGTaGGAGAGTGCTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPTVYCNLIVLKTDSKGYPAGSA*ESALLA
Trigger: AGCCAGCAGAGCACTCTCTCACGCTGATCCAGCCGG...GTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCAATATACAGTGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCTCCAGAAACCCAGTGTaGATTTTCCCATTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVSRNPV*IFPFSG
Trigger: ACCTGAAAATGGGAAAATTCACACTGGGTTTCTGGA...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CTCTGGGCTCAAGTGATTTTTCTCTCCTCTACCTCCCGAGTACTTGGGACCCCACTCTCTGGGCTCAAGTaGTTTTTCTCTCCTCTACCT +
Preference number: 4 (lower is better)
Translates to: LWAQVIFLSSTSRVLGTPLSGLK*FFSPLP
Trigger: AGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAGAG...TGGGGTCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR GCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATGCTCACCATATCTTaGCCACTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHMLTIS*PLPWSG
Trigger: CCCACTCCAGGGCAGTGGGCAAGATATGGTGAGCAT...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000563679.5
ENST00000617553.4
ENST00000618389.4
CDS-3UTR GCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCAATGCTCACCATATCTTaGCCACTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAMLTIS*PLPWSG
Trigger: CCCACTCCAGGGCAGTGGGCAAGATATGGTGAGCAT...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000563679.5
ENST00000617553.4
ENST00000618389.4
CDS-3UTR GCA 90 bp ACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGATACTGCTGCCGTTCCTaGATTTGCGACAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: TAKDTASLASVKCCREPGYCCRS*ICDKQQ
Trigger: CTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTA...TCCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTGTGTGTCCTACTGCTaGCGTTCCTGCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVCVSYC*RSCICD
Trigger: GTCGCAAATGCAGGAACGGCAGCAGTAGGACACACA...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGGCAGTTTGCTTTCTATaGAGGCTACGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWAVCFL*RLRADP
Trigger: TGGATCAGCTCGTAGCCTGCATAGAAAGCAAACTGC...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTGTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAAAAGGCAGCTCTTCATaGTCTTATACTCAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: LWQRTVPDSSLATAQVDTKGSSS*SYTQGL
Trigger: TAGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTT...TGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQARCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGCTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTGGCCTGGAAGCCTCTaGTTGGTGCGACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PHILRLMFRKSKGATGRHWPGSL*LVRLPE
Trigger: CTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCA...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATGCCTCGAGGGTGATCTaGTCCGGCCCACTGGATAGG +
Preference number: 4 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYASRVI*SGPLDR
Trigger: CCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGC...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCGCCTCTGTGAAGTGTTaGAGAGAACCTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLASVKC*REPGEC
Trigger: GCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGC...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACACCCAGACAGCAGCCTTaGCACAGCTCAAGTAGACAC +
Preference number: 4 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTPRQQP*HSSSRH
Trigger: GTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGG...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCATCAGCGTGAGAGAGTaGTCTGCTGGCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLISVRE*SAGSCF
Trigger: GAAACAGGAGCCAGCAGAGCACTCTCTCACGCTGAT...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGAAGTAGGAACGGGCAGTaGCAGCGAGCTTCTACTGAC +
Preference number: 4 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRSRNGQ*QRASTD
Trigger: GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACT...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACAGTAGGAACGGGCAGTaGCAGCGAGCTTCTACTGAC +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHSRNGQ*QRASTD
Trigger: GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACT...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTGTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACATCCCAAAAGCTTGACTaGTGGATTAAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: LWQRTVPDSSLATAQVDTSQKLD*WIKKAQ
Trigger: CTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA...TGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTCTGGGCTCAAGTGATTTTTCTCTCCTCTACCTCCCGAGTACTTGGGACCCCACAATATTTTGGATTCTaGGGCTCTGGGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LWAQVIFLSSTSRVLGTPQYFGF*GSGAPH
Trigger: ATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTG...TGGGGTCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR CCA 90 bp ACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGAAACTCTTCACGCAACTaGAGCGTACAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: TAKDTASLASVKCCREPGNSSRN*SVQHST
Trigger: AGTGCTGTGCTGTACGCTCCAGTTGCGTGAAGAGTT...TCCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTCTATCTCCCGGGCTGTaGCCGCAATGGTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFLSPGL*PQWSPR
Trigger: TCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAG...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTCCCTTCTGTAAAGCCTaGACCGGAGAAAACCAATTC +
Preference number: 4 (lower is better)
Translates to: TQYFGKVGTGSASELLLTPFCKA*TGENQF
Trigger: GAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGG...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGCTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVLEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCAAAAAGGCTTCTGGCCTaGAAGCCTCTGCTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAKRLLA*KPLLGA
Trigger: CGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTT...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp GCTCCACTTGAGCTTCCTGAATGCCTTTCCGAACCACTTCTGTCATGTTTTCCAAAAAGGCTTCTGGCCTaGAAGCCTCTGCTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: APLELPECLSEPLLSCFPKRLLA*KPLLGA
Trigger: CGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTT...TGGAAAACATGACAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAGTGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TQYFGKVGTGSASELLLTLLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTCGGTGTGCTGAGGGCTaGGAGCCCCTGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSRCAEG*EPLGVP
Trigger: AGGGACACCCAGGGGCTCCCAGCCCTCAGCACACCG...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTCGGTGTGCTGAGGGCTaGGAGCCCCTGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFRCAEG*EPLGVP
Trigger: AGGGACACCCAGGGGCTCCCAGCCCTCAGCACACCG...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACGGTGTGCTGAGGGCTaGGAGCCCCTGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKRCAEG*EPLGVP
Trigger: AGGGACACCCAGGGGCTCCCAGCCCTCAGCACACCG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCAGTCATCTTCTGGGTGTaGGACCCCTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAVIFWV*DPFLEG
Trigger: GCCTTCCAGAAAGGGGTCCCACACCCAGAAGATGAC...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACGTCATCTTCTGGGTGTaGGACCCCTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHVIFWV*DPFLEG
Trigger: GCCTTCCAGAAAGGGGTCCCACACCCAGAAGATGAC...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGCCTTCTACCTGTGAGTaGTCATCTTCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTPSTCE*SSSGCG
Trigger: CCCACACCCAGAAGATGACCACTCACAGGTAGAAGG...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATAGCAGGGTGCCCGGCTaGATCAGCGTGAGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYSRVPG*ISVREC
Trigger: GCACTCTCTCACGCTGATCCAGCCGGGCACCCTGCT...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTCAAAAGCTTGACTGCTaGATTAAGAAGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PTAKDTASLASVKCCREPQKLDC*IKKAQG
Trigger: CCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTG...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTTCTTCATATCGAGAATaGATGGCAAGCCTACATATC +
Preference number: 4 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPSSYRE*MASLHI
Trigger: GATATGTAGGCTTGCCATTCATTCTCGATATGAAGA...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTATGCAGGCTACGAGCTaGTCCACATCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFMQATS*STSSPR
Trigger: TCGGGGAGAGGATGTGGATCAGCTCGTAGCCTGCAT...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGTTCCCCTTCGGGATCTaGTTTCAAACTGCTCTTATC +
Preference number: 4 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWFPFGI*FQTALI
Trigger: GATAAGAGCAGTTTGAAATCAGATCCCGAAGGGGAA...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGCTCACTCAAAGCATCTaGACCTCGCAGGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTLTQSI*TSQGPF
Trigger: AAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGAG...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCCTCACTCAAAGCATCTaGACCTCGCAGGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLLTQSI*TSQGPF
Trigger: AAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGAG...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TTTCAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTACCAGTCTCGCCTCTGTaGAGTGTTGCAGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: FQILTRWVLRSTRKSKLLPVSPL*SVAENL
Trigger: CAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGG...TAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGGCTGGGGAGGGCTTCTaGTGCTCTTATTTACAATCC +
Preference number: 4 (lower is better)
Translates to: VLKTDSKGYSQSRLCEVLAGEGF*CSYLQS
Trigger: GGATTGTAAATAAGAGCATCAGAAGCCCTCCCCAGC...CAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCCGGCTGGATCAGCGTaGGAGAGTGCTCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFPAGSA*ESALLA
Trigger: AGCCAGCAGAGCACTCTCTCACGCTGATCCAGCCGG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATCCAGCGAGCTTCTACTaGCTTAAGCAGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYPASFY*LKQGAR
Trigger: CCGGGCACCCTGCTTAAGTCAGTAGAAGCTCGCTGG...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TTGTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACATTACTTACGACAAAGTaGCGCAGTACTTCGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LWQRTVPDSSLATAQVDTLLTTK*RSTSEK
Trigger: CTTTTCCGAAGTACTGCGTCACTTTGTCGTAAGTAA...TGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGTACTGCTGCCGTTCCTaGATTTGCGACAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: VLKTDSKGYSQSRLCEVLYCCRS*ICDKQQ
Trigger: CTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTA...CAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTAAGGTACTGCTGCCGTTCCTaGATTTGCGACAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: QILTRWVLRSTRKSKLLRYCCRS*ICDKQQ
Trigger: CTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTA...CCTTAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACTGTGTGTCCTACTGCTaGCGTTCCTGCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHCVSYC*RSCICD
Trigger: GTCGCAAATGCAGGAACGGCAGCAGTAGGACACACA...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTATGTGTGTCCTACTGCTaGCGTTCCTGCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLCVSYC*RSCICD
Trigger: GTCGCAAATGCAGGAACGGCAGCAGTAGGACACACA...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAATGTGTGTCCTACTGCTaGCGTTCCTGCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCECVSYC*RSCICD
Trigger: GTCGCAAATGCAGGAACGGCAGCAGTAGGACACACA...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAGTTGCTTCCACTTCCTaGTTGAACTCTTCACGCAAC +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRVASTS*LNSSRN
Trigger: GTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGCAAC...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGACTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLKPFFT*LLQLHL
Trigger: CAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTT...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTCTGCTTGGTGCGACTaGCCGAGGGCGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVSAWCD*PRALEA
Trigger: TGCCTCCAACGCCCTCGGGCAGTCGCACCAAGCAGA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGTGGCCTGGAAGCCTCTaGTTGGTGCGACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLWPGSL*LVRLPE
Trigger: CTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCA...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGGCCTCGAGGGTGATCTaGTCCGGCCCACTGGATAGG +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVASRVI*SGPLDR
Trigger: CCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGC...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGCCTCGAGGGTGATCTaGTCCGGCCCACTGGATAGG +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFASRVI*SGPLDR
Trigger: CCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGC...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACGCCTCTGTGAAGTGTTaGAGAGAACCTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHASVKC*REPGEC
Trigger: GCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGC...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTAGCCTCTGTGAAGTGTTaGAGAGAACCTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLASVKC*REPGEC
Trigger: GCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGC...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTGGGCCCAGGCGAGCTaGCAGGGCAGTAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVWAQAS*QGSRSF
Trigger: GAAGCTTCTACTGCCCTGGCAGCTCGCCTGGGCCCA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCAAGTAGGAACGGGCAGTaGCAGCGAGCTTCTACTGAC +
Preference number: 4 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPSRNGQ*QRASTD
Trigger: GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACT...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCTCCCAAAAGCTTGACTaGTGGATTAAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFSQKLD*WIKKAQ
Trigger: CTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACCCATTTTCATATCTaGCCTGGAGTGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTTHFHI*PGVGLE
Trigger: TTCCAGGCCCACTCCAGGGCAGATATGAAAATGGGT...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450288.3
ENST00000614833.4
CDS-3UTR CCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGTTCAGGAGTCCAGCATaGATGTTTTCCCCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTFRSPA*MFSPSG
Trigger: TCCCGAAGGGGAAAACATCCATGCTGGACTCCTGAA...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTCAGGAGTCCAGCATaGATGTTTTCCCCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVFRSPA*MFSPSG
Trigger: TCCCGAAGGGGAAAACATCCATGCTGGACTCCTGAA...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTAAGGTTCAGGAGTCCAGCATaGATGTTTTCCCCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: QILTRWVLRSTRKSKLLRFRSPA*MFSPSG
Trigger: TCCCGAAGGGGAAAACATCCATGCTGGACTCCTGAA...CCTTAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATCTATCTCCCGGGCTGTaGCCGCAATGGTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYLSPGL*PQWSPR
Trigger: TCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAG...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATCTATCTCCCGGGCTGTaGCCGCAATGGTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYLSPGL*PQWSPR
Trigger: TCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAG...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSTARGR*RQRDSC
Trigger: GCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGT...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKTARGR*RQRDSC
Trigger: GCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGT...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACTGGAAGCCTCTGCTTaGTGCGACTGCCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKLEASA*CDCPRA
Trigger: CGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AAAGCATCTGAACCTCGCAGGGACCTTTTAAAAGGCTTCTGGCCTGGAAGCCTCCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KASEPRRDLLKGFWPGSLLLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...GAGGCTTCCAGGCCAGAAGCCTTTTAAAAGGTCCCTGCGAGGTTCAGATGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTTCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFSAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGCGGTGTGCTGAGGGCTaGGAGCCCCTGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQRCAEG*EPLGVP
Trigger: AGGGACACCCAGGGGCTCCCAGCCCTCAGCACACCG...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGTCATCTTCTGGGTGTaGGACCCCTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQVIFWV*DPFLEG
Trigger: GCCTTCCAGAAAGGGGTCCCACACCCAGAAGATGAC...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGGAGAAATGGCCTTGTaGCAGAGGACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQGEMAL*QRTVPD
Trigger: GTCTGGGACTGTCCTCTGCCACAAGGCCATTTCTCC...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGCAGATTTTAACCAGGTaGGTGCTACGTAGCACACGG +
Preference number: 4 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLQILTR*VLRSTR
Trigger: CCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATCTCCTGTTTCTGAGTTaGGCCCAGGCGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYLLFLS*AQASCQ
Trigger: CTGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAG...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATCTCCTGTTTCTGAGTTaGGCCCAGGCGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYLLFLS*AQASCQ
Trigger: CTGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAG...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTCAAAAGCTTGACTGCTaGATTAAGAAGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGQKLDC*IKKAQG
Trigger: CCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTG...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
3UTR CAA 72 bp TCTCTTTACAAACGGTATATAATGGGAGAAATGGCCTaGTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SLYKRYIMGEMA*WQRTVPDSSLA
Trigger: GGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGAAGGCAACATCCATCTaGTGCTGGGATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: VLKTDSKGYSQSRLCEVLKATSI*CWDPNT
Trigger: TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTT...CAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AGTCCCACTGTATATTGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACATGCAGGCTACGAGCTaGTCCACATCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SPTVYCNLIVLKTDSKGYMQATS*STSSPR
Trigger: TCGGGGAGAGGATGTGGATCAGCTCGTAGCCTGCAT...GTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCAATATACAGTGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTTTCCCCTTCGGGATCTaGTTTCAAACTGCTCTTATC +
Preference number: 4 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGFPFGI*FQTALI
Trigger: GATAAGAGCAGTTTGAAATCAGATCCCGAAGGGGAA...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR TCA 90 bp GCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTATTCCCCTTCGGGATCTaGTTTCAAACTGCTCTTATC +
Preference number: 4 (lower is better)
Translates to: AVLRKSRNGQCQRASTDLFPFGI*FQTALI
Trigger: GATAAGAGCAGTTTGAAATCAGATCCCGAAGGGGAA...TAAGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVALEAA*LLHLVL
Trigger: AAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGC...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLALEAA*LLHLVL
Trigger: AAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGC...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACCTCACTCAAAGCATCTaGACCTCGCAGGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHLTQSI*TSQGPF
Trigger: AAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGAG...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTTTACTTACGACAAAGTaGCGCAGTACTTCGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PTAKDTASLASVKCCREPLLTTK*RSTSEK
Trigger: CTTTTCCGAAGTACTGCGTCACTTTGTCGTAAGTAA...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCTCCAGAAACCCAGTGTaGATTTTCCCATTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFSRNPV*IFPFSG
Trigger: ACCTGAAAATGGGAAAATTCACACTGGGTTTCTGGA...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTTCCAGAAACCCAGTGTaGATTTTCCCATTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PTAKDTASLASVKCCREPSRNPV*IFPFSG
Trigger: ACCTGAAAATGGGAAAATTCACACTGGGTTTCTGGA...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TGGCAAGCCTACATATCTTTGCAAGTCCTTCTCTTTCCTCTTCGTGGAAATAAGCCATATCTTGCCCACTaGCCTGGAGTGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: WQAYISLQVLLFPLRGNKPYLAH*PGVGLE
Trigger: TTCCAGGCCCACTCCAGGGCAGTGGGCAAGATATGG...CTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565362.5
CDS-3UTR GCA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGGCAGTTTGCTTTCTATaGAGGCTACGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVAVCFL*RLRADP
Trigger: TGGATCAGCTCGTAGCCTGCATAGAAAGCAAACTGC...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp ACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGAGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: TAKDTASLASVKCCREPGDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...TCCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTGAAGCCTCTGCTTGGTaGGACTGCCCGAGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFEASAW*DCPRAL
Trigger: CAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTC...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTGAAGCCTCTGCTTGGTaGGACTGCCCGAGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSEASAW*DCPRAL
Trigger: CAACGCCCTCGGGCAGTCGCACCAAGCAGAGGCTTC...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATGGCCTGGAAGCCTCTaGTTGGTGCGACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKWPGSL*LVRLPE
Trigger: CTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGGCCA...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAGCCTCGAGGGTGATCTaGTCCGGCCCACTGGATAGG +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKASRVI*SGPLDR
Trigger: CCTATCCAGTGGGCCGGAGCAGATCACCCTCGAGGC...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTTCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PTAKDTASLASVKCCREPSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCCTCTGTGAAGTGTTaGAGAGAACCTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQASVKC*REPGEC
Trigger: GCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGC...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTCCCAGACAGCAGCCTTaGCACAGCTCAAGTAGACAC +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFPRQQP*HSSSRH
Trigger: GTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGG...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCAATCAGCGTGAGAGAGTaGTCTGCTGGCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPISVRE*SAGSCF
Trigger: GAAACAGGAGCCAGCAGAGCACTCTCTCACGCTGAT...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGATCCCAAAAGCTTGACTaGTGGATTAAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRSQKLD*WIKKAQ
Trigger: CTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCCAATATTTTGGATTCTaGCCTGGAGTGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLQYFGF*PGVGLE
Trigger: TTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTG...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569715.5
ENST00000619589.4
CDS-3UTR CCA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTCATATCGAGAATGAATaGCAAGCCTACATATCTTTG +
Preference number: 4 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPHIENE*QAYISL
Trigger: CAAAGATATGTAGGCTTGCCATTCATTCTCGATATG...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTAAGGCGTACAGCACAGCACTaGCAGTTTGCTTTCTATGCA +
Preference number: 4 (lower is better)
Translates to: QILTRWVLRSTRKSKLLRRTAQH*QFAFYA
Trigger: TGCATAGAAAGCAAACTGCCAGTGCTGTGCTGTACG...CCTTAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACAACTCTTCACGCAACTaGAGCGTACAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHNSSRN*SVQHST
Trigger: AGTGCTGTGCTGTACGCTCCAGTTGCGTGAAGAGTT...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACTTCAGGAGTCCAGCATaGATGTTTTCCCCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHFRSPA*MFSPSG
Trigger: TCCCGAAGGGGAAAACATCCATGCTGGACTCCTGAA...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAATTCAGGAGTCCAGCATaGATGTTTTCCCCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCEFRSPA*MFSPSG
Trigger: TCCCGAAGGGGAAAACATCCATGCTGGACTCCTGAA...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGCTATCTCCCGGGCTGTaGCCGCAATGGTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLLSPGL*PQWSPR
Trigger: TCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAG...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCCCCTTCTGTAAAGCCTaGACCGGAGAAAACCAATTC +
Preference number: 4 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLPFCKA*TGENQF
Trigger: GAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGG...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TCTGAACCTCGCAGGGACCTTTTAAAAGGCTTCTGGCCTGGAAGCCTCTGCTTGCTTTGTAGACATATATaGGTTCTGTGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SEPRRDLLKGFWPGSLCLLCRHI*VLWTPE
Trigger: CTCTGGAGTCCACAGAACCCATATATGTCTACAAAG...CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAGGTCCCTGCGAGGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGACTGCCCGAGGGCGTTaGAGGCAGCGTGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQTARGR*RQRDSC
Trigger: GCAGGAGTCACGCTGCCTCCAACGCCCTCGGGCAGT...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTAAAAGGCTTCTGGCCTaGAAGCCTCTGCTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFKRLLA*KPLLGA
Trigger: CGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTT...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLLLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLLLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTLLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATTCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYSAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTGTGGGACCCCTTTCTaGAAGGCCTCGGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVCGTPF*KASVWS
Trigger: CGACCAGACCGAGGCCTTCCAGAAAGGGGTCCCACA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGTGGGACCCCTTTCTaGAAGGCCTCGGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTCGTPF*KASVWS
Trigger: CGACCAGACCGAGGCCTTCCAGAAAGGGGTCCCACA...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGTGTGGGACCCCTTTCTaGAAGGCCTCGGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLCGTPF*KASVWS
Trigger: CGACCAGACCGAGGCCTTCCAGAAAGGGGTCCCACA...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCTGTGGGACCCCTTTCTaGAAGGCCTCGGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFCGTPF*KASVWS
Trigger: CGACCAGACCGAGGCCTTCCAGAAAGGGGTCCCACA...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGCCTTCTACCTGTGAGTaGTCATCTTCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQPSTCE*SSSGCG
Trigger: CCCACACCCAGAAGATGACCACTCACAGGTAGAAGG...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAGTGTTGCAGAGAACCTaGAGAGTGCTAATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRVLQRT*RVLMKS
Trigger: GCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACAC...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AGCACACGGAAGAGCAAGCTCTTAAGGGTAGCATCTATCAGGTTTTCAGATACTGGAGAAATGGCCTTGTaGCAGAGGACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: STRKSKLLRVASIRFSDTGEMAL*QRTVPD
Trigger: GTCTGGGACTGTCCTCTGCCACAAGGCCATTTCTCC...AGTATCTGAAAACCTGATAGATGCTACCCTTAAGAGCTTGCTCTTCCGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACCAGATTTTAACCAGGTaGGTGCTACGTAGCACACGG +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHQILTR*VLRSTR
Trigger: CCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACAGATTTTAACCAGGTaGGTGCTACGTAGCACACGG +
Preference number: 4 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLQILTR*VLRSTR
Trigger: CCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTAGCAGGGTGCCCGGCTaGATCAGCGTGAGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFSRVPG*ISVREC
Trigger: GCACTCTCTCACGCTGATCCAGCCGGGCACCCTGCT...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGGAACCTACCTCTCACTaGTCTATCGGCAGCTATTTC +
Preference number: 4 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLEPTSH*SIGSYF
Trigger: GAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTC...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
3UTR CAA 72 bp AGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTaGCAGAGAACCTGGAGAGTGCTAATGAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SKGYSQSRLCEV*QRTWRVLMKSC
Trigger: ACAGCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACAAGGCAACATCCATCTaGTGCTGGGATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHKATSI*CWDPNT
Trigger: TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTT...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACAAAGGCAACATCCATCTaGTGCTGGGATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTKATSI*CWDPNT
Trigger: TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTT...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGATGCAGGCTACGAGCTaGTCCACATCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVMQATS*STSSPR
Trigger: TCGGGGAGAGGATGTGGATCAGCTCGTAGCCTGCAT...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp GTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGTTCCCCTTCGGGATCTaGTTTCAAACTGCTCTTATC +
Preference number: 4 (lower is better)
Translates to: VLKTDSKGYSQSRLCEVLFPFGI*FQTALI
Trigger: GATAAGAGCAGTTTGAAATCAGATCCCGAAGGGGAA...CAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTGCGTTGGAGGCAGCGTaGCTCCTGCACCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSALEAA*LLHLVL
Trigger: AAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACGC...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCCCAGCGAGCTTCTACTaGCTTAAGCAGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: YLLYFIAPNREDCLIICTPASFY*LKQGAR
Trigger: CCGGGCACCCTGCTTAAGTCAGTAGAAGCTCGCTGG...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGTCCTCTTCTGTTCTCTaGCTGTCCTCCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQSSSVL*LSSSIF
Trigger: GAAGATGCTGGAGGACAGTCAGAGAACAGAAGAGGA...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACCGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PHILRLMFRKSKGATGRHRCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACACTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTTCAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTAAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: FQILTRWVLRSTRKSKLLKPFFT*LLQLHL
Trigger: CAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTT...TAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCCCCACTACAGGGATCTaGCGCAACACCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: YLLYFIAPNREDCLIICTPTTGI*RNTPSS
Trigger: GGAAGAGGGGGTGTTGCGGCAGATCCCTGTAGTGGG...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TCACTCAAAGCATCTGAACCTCGCAGGGACCTTTTAAAAGGCTTCTGGCCTGGAGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: SLKASEPRRDLLKGFWPGDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...TCCAGGCCAGAAGCCTTTTAAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR GCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGATCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTCCCAAAAGCTTGACTaGTGGATTAAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLSQKLD*WIKKAQ
Trigger: CTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACAATATTTTGGATTCTaGCCTGGAGTGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAQYFGF*PGVGLE
Trigger: TTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTG...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000569715.5
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACAATATTTTGGATTCTaGGGCTCTGGGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLQYFGF*GSGAPH
Trigger: ATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTG...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396410.9
ENST00000618389.4
CDS-3UTR CCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACAATATTTTGGATTCTaGGGCTCTGGGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAQYFGF*GSGAPH
Trigger: ATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTG...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000563679.5
ENST00000617553.4
ENST00000618389.4
CDS-3UTR CCA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAACGTACAGCACAGCACTaGCAGTTTGCTTTCTATGCA +
Preference number: 4 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCERTAQH*QFAFYA
Trigger: TGCATAGAAAGCAAACTGCCAGTGCTGTGCTGTACG...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACGTACAGCACAGCACTaGCAGTTTGCTTTCTATGCA +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQARTAQH*QFAFYA
Trigger: TGCATAGAAAGCAAACTGCCAGTGCTGTGCTGTACG...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGTTCAGGAGTCCAGCATaGATGTTTTCCCCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQFRSPA*MFSPSG
Trigger: TCCCGAAGGGGAAAACATCCATGCTGGACTCCTGAA...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGGGGCTGTGGCCGCAATaGTCTCCACGAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQGLWPQ*SPRAQQ
Trigger: CTGCTGAGCTCGTGGAGACCATTGCGGCCACAGCCC...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACTATCTCCCGGGCTGTaGCCGCAATGGTCTCCACGA +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKLSPGL*PQWSPR
Trigger: TCGTGGAGACCATTGCGGCCACAGCCCGGGAGATAG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACCCTTCTGTAAAGCCTaGACCGGAGAAAACCAATTC +
Preference number: 4 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLPFCKA*TGENQF
Trigger: GAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGG...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGACTTTGTAGACATATATaGGTTCTGTGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRLCRHI*VLWTPE
Trigger: CTCTGGAGTCCACAGAACCCATATATGTCTACAAAG...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATAAAAGGCTTCTGGCCTaGAAGCCTCTGCTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYKRLLA*KPLLGA
Trigger: CGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTT...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGTCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLSAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTSAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTTGTGGGACCCCTTTCTaGAAGGCCTCGGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSCGTPF*KASVWS
Trigger: CGACCAGACCGAGGCCTTCCAGAAAGGGGTCCCACA...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACTCCTGTTTCTGAGTTaGGCCCAGGCGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKLLFLS*AQASCQ
Trigger: CTGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACAAAAGCTTGACTGCTaGATTAAGAAGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAQKLDC*IKKAQG
Trigger: CCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTG...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACAGCACGAATCCAGATCTaGATCCTACATCTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTARIQI*ILHLLG
Trigger: ACCCAACAGATGTAGGATCCAGATCTGGATTCGTGC...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CCA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTGTTCTCCAATATTTTaGATTCTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVCSPIF*ILPWSG
Trigger: CCCACTCCAGGGCAGAATCCAAAATATTGGAGAACA...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569715.5
ENST00000619589.4
CDS-3UTR TCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGAAGGCAACATCCATCTaGTGCTGGGATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQKATSI*CWDPNT
Trigger: TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTT...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCATGCAGGCTACGAGCTaGTCCACATCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: YLLYFIAPNREDCLIICTMQATS*STSSPR
Trigger: TCGGGGAGAGGATGTGGATCAGCTCGTAGCCTGCAT...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTATGCAGGCTACGAGCTaGTCCACATCCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSMQATS*STSSPR
Trigger: TCGGGGAGAGGATGTGGATCAGCTCGTAGCCTGCAT...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGCGGTCCTTCTACCTGTaGGTGGTCATCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLRSFYL*VVIFWV
Trigger: CACCCAGAAGATGACCACTCACAGGTAGAAGGACCG...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCGGTCCTTCTACCTGTaGGTGGTCATCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFRSFYL*VVIFWV
Trigger: CACCCAGAAGATGACCACTCACAGGTAGAAGGACCG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGCGGTCCTTCTACCTGTaGGTGGTCATCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVRSFYL*VVIFWV
Trigger: CACCCAGAAGATGACCACTCACAGGTAGAAGGACCG...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp GTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: VLKTDSKGYSQSRLCEVLVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...CAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTCCAGTCTCGCCTCTGTaGAGTGTTGCAGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTPVSPL*SVAENL
Trigger: CAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGG...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTTCCTCTTCTGTTCTCTaGCTGTCCTCCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFSSSVL*LSSSIF
Trigger: GAAGATGCTGGAGGACAGTCAGAGAACAGAAGAGGA...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACCATATCTTGCCCACTaGCCTGGAGTGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKPYLAH*PGVGLE
Trigger: TTCCAGGCCCACTCCAGGGCAGTGGGCAAGATATGG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000563679.5
ENST00000617553.4
ENST00000618389.4
CDS-3UTR GCA 90 bp ATATCGAGAATGAATGGCAAGCCTACATATCTTTGCAAGTCCTTCTCTTTCCTCATGCTCACCATATCTTaGCCACTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ISRMNGKPTYLCKSFSFLMLTIS*PLPWSG
Trigger: CCCACTCCAGGGCAGTGGGCAAGATATGGTGAGCAT...GAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565362.5
CDS-3UTR GCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTTACTGCTGCCGTTCCTaGATTTGCGACAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFYCCRS*ICDKQQ
Trigger: CTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTA...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCAGCAGTTTGCTTTCTATaGAGGCTACGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPAVCFL*RLRADP
Trigger: TGGATCAGCTCGTAGCCTGCATAGAAAGCAAACTGC...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCAGTTTGCTTTCTATaGAGGCTACGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQAVCFL*RLRADP
Trigger: TGGATCAGCTCGTAGCCTGCATAGAAAGCAAACTGC...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGTTGCTTCCACTTCCTaGTTGAACTCTTCACGCAAC +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQVASTS*LNSSRN
Trigger: GTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGCAAC...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTAAAAGGCAGCTCTTCATaGTCTTATACTCAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLKGSSS*SYTQGL
Trigger: TAGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTT...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTAAAAGGCAGCTCTTCATaGTCTTATACTCAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLKGSSS*SYTQGL
Trigger: TAGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTT...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCAAAAGGCAGCTCTTCATaGTCTTATACTCAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAKGSSS*SYTQGL
Trigger: TAGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTT...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFRCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGCTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFKPFFT*LLQLHL
Trigger: CAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTT...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AGCACACGGAAGAGCAAGCTCTTAAGGGTAGCATCTATCAGGTTTTCAGATACTAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: STRKSKLLRVASIRFSDTKPFFT*LLQLHL
Trigger: CAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTT...AGTATCTGAAAACCTGATAGATGCTACCCTTAAGAGCTTGCTCTTCCGTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCEDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AGTCCCACTGTATATTGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACGCCTCTGTGAAGTGTTaGAGAGAACCTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: SPTVYCNLIVLKTDSKGYASVKC*REPGEC
Trigger: GCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGC...GTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCAATATACAGTGGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTAGTCCCACTGTATATTaGAACTTGATCGTACTAAAG +
Preference number: 4 (lower is better)
Translates to: PTAKDTASLASVKCCREPSPTVY*NLIVLK
Trigger: CTTTAGTACGATCAAGTTGCAATATACAGTGGGACT...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTATCCCAAAAGCTTGACTaGTGGATTAAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLSQKLD*WIKKAQ
Trigger: CTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGACTCCCCCATTTTATCTaGTATACTTCATTGCACCAA +
Preference number: 4 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRLPHFI*YTSLHQ
Trigger: TTGGTGCAATGAAGTATAGCAGATAAAATGGGGGAG...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AGCACACGGAAGAGCAAGCTCTTAAGGGTAGCATCTATCAGGTTTTCAGATACTACCCATTTTCATATCTaGCCTGGAGTGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: STRKSKLLRVASIRFSDTTHFHI*PGVGLE
Trigger: TTCCAGGCCCACTCCAGGGCAGATATGAAAATGGGT...AGTATCTGAAAACCTGATAGATGCTACCCTTAAGAGCTTGCTCTTCCGTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450288.3
ENST00000614833.4
CDS-3UTR CCA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGCATATCGAGAATGAATaGCAAGCCTACATATCTTTG +
Preference number: 4 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWHIENE*QAYISL
Trigger: CAAAGATATGTAGGCTTGCCATTCATTCTCGATATG...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCCATATCGAGAATGAATaGCAAGCCTACATATCTTTG +
Preference number: 4 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFHIENE*QAYISL
Trigger: CAAAGATATGTAGGCTTGCCATTCATTCTCGATATG...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCACGTACAGCACAGCACTaGCAGTTTGCTTTCTATGCA +
Preference number: 4 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPRTAQH*QFAFYA
Trigger: TGCATAGAAAGCAAACTGCCAGTGCTGTGCTGTACG...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTAACTCTTCACGCAACTaGAGCGTACAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFNSSRN*SVQHST
Trigger: AGTGCTGTGCTGTACGCTCCAGTTGCGTGAAGAGTT...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGCCCTTCTGTAAAGCCTaGACCGGAGAAAACCAATTC +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQPFCKA*TGENQF
Trigger: GAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGG...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGCTTTGTAGACATATATaGGTTCTGTGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVLCRHI*VLWTPE
Trigger: CTCTGGAGTCCACAGAACCCATATATGTCTACAAAG...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCAAAAGGCTTCTGGCCTaGAAGCCTCTGCTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFKRLLA*KPLLGA
Trigger: CGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTT...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAAGGCTTCTGGCCTaGAAGCCTCTGCTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLKRLLA*KPLLGA
Trigger: CGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTT...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGAAAAGGCTTCTGGCCTaGAAGCCTCTGCTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVKRLLA*KPLLGA
Trigger: CGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTT...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQLLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CCACTTGAGCTTCCTGAATGCCTTTCCGAACCACTTCTGTCATGTTTTCCAGAACTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PLELPECLSEPLLSCFPELLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...TTCTGGAAAACATGACAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTTCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSSAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTTCTGCTCCGGCCCACTaGATAGGCGCTCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFSAPAH*IGAPPF
Trigger: AAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGA...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGTGTGGGACCCCTTTCTaGAAGGCCTCGGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQCGTPF*KASVWS
Trigger: CGACCAGACCGAGGCCTTCCAGAAAGGGGTCCCACA...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGGTCATCTTCTGGGTGTaGGACCCCTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLVIFWV*DPFLEG
Trigger: GCCTTCCAGAAAGGGGTCCCACACCCAGAAGATGAC...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGTCATCTTCTGGGTGTaGGACCCCTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFVIFWV*DPFLEG
Trigger: GCCTTCCAGAAAGGGGTCCCACACCCAGAAGATGAC...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATCCTTCTACCTGTGAGTaGTCATCTTCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYPSTCE*SSSGCG
Trigger: CCCACACCCAGAAGATGACCACTCACAGGTAGAAGG...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACGTGTTGCAGAGAACCTaGAGAGTGCTAATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHVLQRT*RVLMKS
Trigger: GCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACAC...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AGTCCCACTGTATATTGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACGGATCCTACATCTGTTaGGTCTTAGGCCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SPTVYCNLIVLKTDSKGYGSYIC*VLGLLP
Trigger: GGGAAGGAGGCCTAAGACCCAACAGATGTAGGATCC...GTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCAATATACAGTGGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CCA 90 bp TTTCAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTAGCACGAATCCAGATCTaGATCCTACATCTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: FQILTRWVLRSTRKSKLLARIQI*ILHLLG
Trigger: ACCCAACAGATGTAGGATCCAGATCTGGATTCGTGC...TAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCATGTTCTCCAATATTTTaGATTCTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQACSPIF*ILPWSG
Trigger: CCCACTCCAGGGCAGAATCCAAAATATTGGAGAACA...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000569715.5
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTCGGTCCTTCTACCTGTaGGTGGTCATCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSRSFYL*VVIFWV
Trigger: CACCCAGAAGATGACCACTCACAGGTAGAAGGACCG...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTCGGTCCTTCTACCTGTaGGTGGTCATCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFRSFYL*VVIFWV
Trigger: CACCCAGAAGATGACCACTCACAGGTAGAAGGACCG...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTCCAGTCTCGCCTCTGTaGAGTGTTGCAGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFPVSPL*SVAENL
Trigger: CAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGG...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATGCTGGGGAGGGCTTCTaGTGCTCTTATTTACAATCC +
Preference number: 4 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYAGEGF*CSYLQS
Trigger: GGATTGTAAATAAGAGCATCAGAAGCCCTCCCCAGC...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTAGAACAAAGATACTTTaGCATCTTTATCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGRTKIL*HLYHSR
Trigger: CCTGCTGTGATAAAGATGTCAAAGTATCTTTGTTCT...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR GCA 90 bp AGTCCCACTGTATATTGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACTACTGCTGCCGTTCCTaGATTTGCGACAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: SPTVYCNLIVLKTDSKGYYCCRS*ICDKQQ
Trigger: CTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTA...GTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCAATATACAGTGGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCTGTGTGTCCTACTGCTaGCGTTCCTGCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFCVSYC*RSCICD
Trigger: GTCGCAAATGCAGGAACGGCAGCAGTAGGACACACA...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTGTTGCTTCCACTTCCTaGTTGAACTCTTCACGCAAC +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFVASTS*LNSSRN
Trigger: GTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGCAAC...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGAAAGGCAGCTCTTCATaGTCTTATACTCAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQKGSSS*SYTQGL
Trigger: TAGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTT...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKRCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTCGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSRCRSP*RHKGSS
Trigger: AGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACG...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTCTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGGCCTCTGTGAAGTGTTaGAGAGAACCTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVASVKC*REPGEC
Trigger: GCACTCTCCAGGTTCTCTGCAACACTTCACAGAGGC...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTAGTAGGAACGGGCAGTaGCAGCGAGCTTCTACTGAC +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSSRNGQ*QRASTD
Trigger: GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACT...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGCTCCCCCATTTTATCTaGTATACTTCATTGCACCAA +
Preference number: 4 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVLPHFI*YTSLHQ
Trigger: TTGGTGCAATGAAGTATAGCAGATAAAATGGGGGAG...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CGATCTCAGCTCCCTGTAGCCTTGACCTCTCTGGGCTCAAGTGATTTTTCTCTCCATATCGAGAATGAATaGCAAGCCTACATATCTTTG +
Preference number: 4 (lower is better)
Translates to: RSQLPVALTSLGSSDFSLHIENE*QAYISL
Trigger: CAAAGATATGTAGGCTTGCCATTCATTCTCGATATG...GAGAGAAAAATCACTTGAGCCCAGAGAGGTCAAGGCTACAGGGAGCTGAGATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR CCA 90 bp GCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTACATATCGAGAATGAATaGCAAGCCTACATATCTTTG +
Preference number: 4 (lower is better)
Translates to: AVLRKSRNGQCQRASTDLHIENE*QAYISL
Trigger: CAAAGATATGTAGGCTTGCCATTCATTCTCGATATG...TAAGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTCGTACAGCACAGCACTaGCAGTTTGCTTTCTATGCA +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFRTAQH*QFAFYA
Trigger: TGCATAGAAAGCAAACTGCCAGTGCTGTGCTGTACG...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACTTTGTAGACATATATaGGTTCTGTGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VHEVRQADSPPRKPTFQALCRHI*VLWTPE
Trigger: CTCTGGAGTCCACAGAACCCATATATGTCTACAAAG...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAAAAAGGCTTCTGGCCTaGAAGCCTCTGCTTGGTGCG +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKKRLLA*KPLLGA
Trigger: CGCACCAAGCAGAGGCTTCCAGGCCAGAAGCCTTTT...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTGTCATCTTCTGGGTGTaGGACCCCTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSVIFWV*DPFLEG
Trigger: GCCTTCCAGAAAGGGGTCCCACACCCAGAAGATGAC...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTCCTTCTACCTGTGAGTaGTCATCTTCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTPSTCE*SSSGCG
Trigger: CCCACACCCAGAAGATGACCACTCACAGGTAGAAGG...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCAGTGTTGCAGAGAACCTaGAGAGTGCTAATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPVLQRT*RVLMKS
Trigger: GCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACAC...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGTGTTGCAGAGAACCTaGAGAGTGCTAATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQVLQRT*RVLMKS
Trigger: GCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACAC...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTGGAGAAATGGCCTTGTaGCAGAGGACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSGEMAL*QRTVPD
Trigger: GTCTGGGACTGTCCTCTGCCACAAGGCCATTTCTCC...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AGTCCCACTGTATATTGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACCAGATTTTAACCAGGTaGGTGCTACGTAGCACACGG +
Preference number: 4 (lower is better)
Translates to: SPTVYCNLIVLKTDSKGYQILTR*VLRSTR
Trigger: CCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTG...GTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCAATATACAGTGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTGGATCCTACATCTGTTaGGTCTTAGGCCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTGSYIC*VLGLLP
Trigger: GGGAAGGAGGCCTAAGACCCAACAGATGTAGGATCC...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGGATCCTACATCTGTTaGGTCTTAGGCCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFGSYIC*VLGLLP
Trigger: GGGAAGGAGGCCTAAGACCCAACAGATGTAGGATCC...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGTGTTCTCCAATATTTTaGATTCTGCCCTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQCSPIF*ILPWSG
Trigger: CCCACTCCAGGGCAGAATCCAAAATATTGGAGAACA...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000569715.5
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTTTCCCCTTCGGGATCTaGTTTCAAACTGCTCTTATC +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFFPFGI*FQTALI
Trigger: GATAAGAGCAGTTTGAAATCAGATCCCGAAGGGGAA...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGCTCACTCAAAGCATCTaGACCTCGCAGGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLLTQSI*TSQGPF
Trigger: AAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGAG...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCTCACTCAAAGCATCTaGACCTCGCAGGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFLTQSI*TSQGPF
Trigger: AAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGAG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTGCTGGGGAGGGCTTCTaGTGCTCTTATTTACAATCC +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTAGEGF*CSYLQS
Trigger: GGATTGTAAATAAGAGCATCAGAAGCCCTCCCCAGC...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp TTTCAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTATTACTTACGACAAAGTaGCGCAGTACTTCGGAAAAG +
Preference number: 4 (lower is better)
Translates to: FQILTRWVLRSTRKSKLLLLTTK*RSTSEK
Trigger: CTTTTCCGAAGTACTGCGTCACTTTGTCGTAAGTAA...TAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGAGAACAAAGATACTTTaGCATCTTTATCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLRTKIL*HLYHSR
Trigger: CCTGCTGTGATAAAGATGTCAAAGTATCTTTGTTCT...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR GCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTACTGCTGCCGTTCCTaGATTTGCGACAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVYCCRS*ICDKQQ
Trigger: CTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCTACTGCTGCCGTTCCTaGATTTGCGACAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFYCCRS*ICDKQQ
Trigger: CTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTA...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTTGTGTGTCCTACTGCTaGCGTTCCTGCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSCVSYC*RSCICD
Trigger: GTCGCAAATGCAGGAACGGCAGCAGTAGGACACACA...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATGCAGTTTGCTTTCTATaGAGGCTACGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYAVCFL*RLRADP
Trigger: TGGATCAGCTCGTAGCCTGCATAGAAAGCAAACTGC...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATGTTGCTTCCACTTCCTaGTTGAACTCTTCACGCAAC +
Preference number: 4 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYVASTS*LNSSRN
Trigger: GTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGCAAC...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVKPFFT*LLQLHL
Trigger: CAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTT...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGTCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGAGTCCCACTGTATATTaGAACTTGATCGTACTAAAG +
Preference number: 4 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVSPTVY*NLIVLK
Trigger: CTTTAGTACGATCAAGTTGCAATATACAGTGGGACT...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAATCAGCGTGAGAGAGTaGTCTGCTGGCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKISVRE*SAGSCF
Trigger: GAAACAGGAGCCAGCAGAGCACTCTCTCACGCTGAT...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGAGTAGGAACGGGCAGTaGCAGCGAGCTTCTACTGAC +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQSRNGQ*QRASTD
Trigger: GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACT...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACTCCCCCATTTTATCTaGTATACTTCATTGCACCAA +
Preference number: 4 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRLPHFI*YTSLHQ
Trigger: TTGGTGCAATGAAGTATAGCAGATAAAATGGGGGAG...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGCATATCGAGAATGAATaGCAAGCCTACATATCTTTG +
Preference number: 4 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTHIENE*QAYISL
Trigger: CAAAGATATGTAGGCTTGCCATTCATTCTCGATATG...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATCGTACAGCACAGCACTaGCAGTTTGCTTTCTATGCA +
Preference number: 4 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYRTAQH*QFAFYA
Trigger: TGCATAGAAAGCAAACTGCCAGTGCTGTGCTGTACG...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCAACTCTTCACGCAACTaGAGCGTACAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFNSSRN*SVQHST
Trigger: AGTGCTGTGCTGTACGCTCCAGTTGCGTGAAGAGTT...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCTTCAGGAGTCCAGCATaGATGTTTTCCCCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFFRSPA*MFSPSG
Trigger: TCCCGAAGGGGAAAACATCCATGCTGGACTCCTGAA...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTCAGGAGTCCAGCATaGATGTTTTCCCCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVFRSPA*MFSPSG
Trigger: TCCCGAAGGGGAAAACATCCATGCTGGACTCCTGAA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATCCCTTCTGTAAAGCCTaGACCGGAGAAAACCAATTC +
Preference number: 4 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYPFCKA*TGENQF
Trigger: GAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGG...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCACTTTGTAGACATATATaGGTTCTGTGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPLCRHI*VLWTPE
Trigger: CTCTGGAGTCCACAGAACCCATATATGTCTACAAAG...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGGTCATCTTCTGGGTGTaGGACCCCTTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQVIFWV*DPFLEG
Trigger: GCCTTCCAGAAAGGGGTCCCACACCCAGAAGATGAC...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACCTTCTACCTGTGAGTaGTCATCTTCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKPSTCE*SSSGCG
Trigger: CCCACACCCAGAAGATGACCACTCACAGGTAGAAGG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
3UTR CAA 72 bp ACTTTGACATCTTTATCACAGCAGGGGACAGTAAGGTaGGCTTCTCTAATGCCCACCATCTTGTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: TLTSLSQQGTVR*ASLMPTILCFQ
Trigger: CTGAAAACACAAGATGGTGGGCATTAGAGAAGCCAACCTTACTGTCCCCTGCTGTGATAAAGATGTCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR TCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTAAGGCAACATCCATCTaGTGCTGGGATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTKATSI*CWDPNT
Trigger: TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTT...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAGGCAACATCCATCTaGTGCTGGGATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLKATSI*CWDPNT
Trigger: TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTT...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTCTCACTCAAAGCATCTaGACCTCGCAGGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFLTQSI*TSQGPF
Trigger: AAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGAG...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACTCACTCAAAGCATCTaGACCTCGCAGGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKLTQSI*TSQGPF
Trigger: AAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGAG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAGCTGGGGAGGGCTTCTaGTGCTCTTATTTACAATCC +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKAGEGF*CSYLQS
Trigger: GGATTGTAAATAAGAGCATCAGAAGCCCTCCCCAGC...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTTTACTTACGACAAAGTaGCGCAGTACTTCGGAAAAG +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFLLTTK*RSTSEK
Trigger: CTTTTCCGAAGTACTGCGTCACTTTGTCGTAAGTAA...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTTACTGCTGCCGTTCCTaGATTTGCGACAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFYCCRS*ICDKQQ
Trigger: CTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTA...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGGCAGTTTGCTTTCTATaGAGGCTACGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLAVCFL*RLRADP
Trigger: TGGATCAGCTCGTAGCCTGCATAGAAAGCAAACTGC...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGCAGTTTGCTTTCTATaGAGGCTACGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFAVCFL*RLRADP
Trigger: TGGATCAGCTCGTAGCCTGCATAGAAAGCAAACTGC...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTGTTGCTTCCACTTCCTaGTTGAACTCTTCACGCAAC +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTVASTS*LNSSRN
Trigger: GTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGCAAC...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGTTGCTTCCACTTCCTaGTTGAACTCTTCACGCAAC +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFVASTS*LNSSRN
Trigger: GTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGCAAC...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAAAGCCGTTCTTCACTTaGCTTCTGCAGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKKPFFT*LLQLHL
Trigger: CAAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTT...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTAAGTCCCACTGTATATTaGAACTTGATCGTACTAAAG +
Preference number: 4 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLSPTVY*NLIVLK
Trigger: CTTTAGTACGATCAAGTTGCAATATACAGTGGGACT...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGATCAGCGTGAGAGAGTaGTCTGCTGGCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQISVRE*SAGSCF
Trigger: GAAACAGGAGCCAGCAGAGCACTCTCTCACGCTGAT...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTCAATATTTTGGATTCTaGCCTGGAGTGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTQYFGF*PGVGLE
Trigger: TTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTG...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569715.5
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCAATATTTTGGATTCTaGGGCTCTGGGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFQYFGF*GSGAPH
Trigger: ATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000563679.5
ENST00000617553.4
ENST00000618389.4
CDS-3UTR CCA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACACATATCGAGAATGAATaGCAAGCCTACATATCTTTG +
Preference number: 4 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTHIENE*QAYISL
Trigger: CAAAGATATGTAGGCTTGCCATTCATTCTCGATATG...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAAACTCTTCACGCAACTaGAGCGTACAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKNSSRN*SVQHST
Trigger: AGTGCTGTGCTGTACGCTCCAGTTGCGTGAAGAGTT...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTCCCTTCTGTAAAGCCTaGACCGGAGAAAACCAATTC +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTPFCKA*TGENQF
Trigger: GAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGG...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFLLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLLLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTLLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGCCTTCTACCTGTGAGTaGTCATCTTCTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQPSTCE*SSSGCG
Trigger: CCCACACCCAGAAGATGACCACTCACAGGTAGAAGG...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATGTGTTGCAGAGAACCTaGAGAGTGCTAATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYVLQRT*RVLMKS
Trigger: GCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACAC...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGGAACCTACCTCTCACTaGTCTATCGGCAGCTATTTC +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLEPTSH*SIGSYF
Trigger: GAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTC...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGCACGAATCCAGATCTaGATCCTACATCTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFARIQI*ILHLLG
Trigger: ACCCAACAGATGTAGGATCCAGATCTGGATTCGTGC...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR TCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTAAGGCAACATCCATCTaGTGCTGGGATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFKATSI*CWDPNT
Trigger: TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTT...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAAAGGCAACATCCATCTaGTGCTGGGATCCAAACACA +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKKATSI*CWDPNT
Trigger: TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTT...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTCCCCTTCGGGATCTaGTTTCAAACTGCTCTTATC +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVFPFGI*FQTALI
Trigger: GATAAGAGCAGTTTGAAATCAGATCCCGAAGGGGAA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGCTCACTCAAAGCATCTaGACCTCGCAGGGACCTTTT +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQLTQSI*TSQGPF
Trigger: AAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGAG...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTCCAGAAACCCAGTGTaGATTTTCCCATTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PHILRLMFRKSKGATGRHSRNPV*IFPFSG
Trigger: ACCTGAAAATGGGAAAATTCACACTGGGTTTCTGGA...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGTACTGCTGCCGTTCCTaGATTTGCGACAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQYCCRS*ICDKQQ
Trigger: CTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTA...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTGCAGTTTGCTTTCTATaGAGGCTACGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFAVCFL*RLRADP
Trigger: TGGATCAGCTCGTAGCCTGCATAGAAAGCAAACTGC...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCGTTGCTTCCACTTCCTaGTTGAACTCTTCACGCAAC +
Preference number: 4 (lower is better)
Translates to: YLLYFIAPNREDCLIICTVASTS*LNSSRN
Trigger: GTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGCAAC...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTCAATATTTTGGATTCTaGCCTGGAGTGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSQYFGF*PGVGLE
Trigger: TTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTG...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000569715.5
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTCAATATTTTGGATTCTaGGGCTCTGGGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFQYFGF*GSGAPH
Trigger: ATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTG...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000563679.5
ENST00000617553.4
ENST00000618389.4
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACGTACAGCACAGCACTaGCAGTTTGCTTTCTATGCA +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKRTAQH*QFAFYA
Trigger: TGCATAGAAAGCAAACTGCCAGTGCTGTGCTGTACG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AGTCCCACTGTATATTGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACCTTTGTAGACATATATaGGTTCTGTGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SPTVYCNLIVLKTDSKGYLCRHI*VLWTPE
Trigger: CTCTGGAGTCCACAGAACCCATATATGTCTACAAAG...GTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCAATATACAGTGGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSLLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGTGTTGCAGAGAACCTaGAGAGTGCTAATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFVLQRT*RVLMKS
Trigger: GCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACAC...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTCAAAAGCTTGACTGCTaGATTAAGAAGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSQKLDC*IKKAQG
Trigger: CCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTG...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCCAAAAGCTTGACTGCTaGATTAAGAAGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: YLLYFIAPNREDCLIICTQKLDC*IKKAQG
Trigger: CCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTG...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTGAACCTACCTCTCACTaGTCTATCGGCAGCTATTTC +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSEPTSH*SIGSYF
Trigger: GAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTC...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAGAACCTACCTCTCACTaGTCTATCGGCAGCTATTTC +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKEPTSH*SIGSYF
Trigger: GAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTC...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR TCA 90 bp TGGCAAGCCTACATATCTTTGCAAGTCCTTCTCTTTCCTCTTCGTGGAAATAAGTCTTCATATCGAGAATaGATGGCAAGCCTACATATC +
Preference number: 4 (lower is better)
Translates to: WQAYISLQVLLFPLRGNKSSYRE*MASLHI
Trigger: GATATGTAGGCTTGCCATTCATTCTCGATATGAAGA...CTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565362.5
CDS-3UTR TCA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCTTCCCCTTCGGGATCTaGTTTCAAACTGCTCTTATC +
Preference number: 4 (lower is better)
Translates to: YLLYFIAPNREDCLIICTFPFGI*FQTALI
Trigger: GATAAGAGCAGTTTGAAATCAGATCCCGAAGGGGAA...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTTTCCCCTTCGGGATCTaGTTTCAAACTGCTCTTATC +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFFPFGI*FQTALI
Trigger: GATAAGAGCAGTTTGAAATCAGATCCCGAAGGGGAA...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTACTTACGACAAAGTaGCGCAGTACTTCGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVLLTTK*RSTSEK
Trigger: CTTTTCCGAAGTACTGCGTCACTTTGTCGTAAGTAA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTCCAGAAACCCAGTGTaGATTTTCCCATTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVSRNPV*IFPFSG
Trigger: ACCTGAAAATGGGAAAATTCACACTGGGTTTCTGGA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAAAAGGCAGCTCTTCATaGTCTTATACTCAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKKGSSS*SYTQGL
Trigger: TAGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTT...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTAAAGGCAGCTCTTCATaGTCTTATACTCAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSKGSSS*SYTQGL
Trigger: TAGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTT...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGCTTGAGCTTCCTGAATaGCTTTCCGAACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQLELPE*LSEPLL
Trigger: CAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAG...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGTCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCTCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTCATATCGAGAATGAATaGCAAGCCTACATATCTTTG +
Preference number: 4 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFHIENE*QAYISL
Trigger: CAAAGATATGTAGGCTTGCCATTCATTCTCGATATG...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGCGTACAGCACAGCACTaGCAGTTTGCTTTCTATGCA +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQRTAQH*QFAFYA
Trigger: TGCATAGAAAGCAAACTGCCAGTGCTGTGCTGTACG...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGCCCTTCTGTAAAGCCTaGACCGGAGAAAACCAATTC +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQPFCKA*TGENQF
Trigger: GAATTGGTTTTCTCCGGTCCAGGCTTTACAGAAGGG...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTCTTTGTAGACATATATaGGTTCTGTGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTLCRHI*VLWTPE
Trigger: CTCTGGAGTCCACAGAACCCATATATGTCTACAAAG...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGCTTTTAAAAGGCTTCTaGCCTGGAAGCCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQLLKGF*PGSLCL
Trigger: CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAG...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTGTGTTGCAGAGAACCTaGAGAGTGCTAATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSVLQRT*RVLMKS
Trigger: GCTTTTCATTAGCACTCTCCAGGTTCTCTGCAACAC...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR TCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCTCTTCATATCGAGAATaGATGGCAAGCCTACATATC +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFSSYRE*MASLHI
Trigger: GATATGTAGGCTTGCCATTCATTCTCGATATGAAGA...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGTTCCCCTTCGGGATCTaGTTTCAAACTGCTCTTATC +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQFPFGI*FQTALI
Trigger: GATAAGAGCAGTTTGAAATCAGATCCCGAAGGGGAA...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTGTGCCAAAATCCCAGTaGAGCACAAACAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSVPKSQ*STNNSN
Trigger: ATTACTGTTGTTTGTGCTTCACTGGGATTTTGGCAC...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTTTACTTACGACAAAGTaGCGCAGTACTTCGGAAAAG +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSLLTTK*RSTSEK
Trigger: CTTTTCCGAAGTACTGCGTCACTTTGTCGTAAGTAA...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGGACTCCTGCACCTTGTaGTTTGTAGACATATATGGG +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQDSCTL*FVDIYG
Trigger: CCCATATATGTCTACAAAGCACAAGGTGCAGGAGTC...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGCTCCCCCATTTTATCTaGTATACTTCATTGCACCAA +
Preference number: 4 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVLPHFI*YTSLHQ
Trigger: TTGGTGCAATGAAGTATAGCAGATAAAATGGGGGAG...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CAAGCCTACATATCTTTGCAAGTCCTTCTCTTTCCTCTTCGTGGAAATAAGCACCATATCGAGAATGAATaGCAAGCCTACATATCTTTG +
Preference number: 4 (lower is better)
Translates to: QAYISLQVLLFPLRGNKHHIENE*QAYISL
Trigger: CAAAGATATGTAGGCTTGCCATTCATTCTCGATATG...GTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565362.5
CDS-3UTR CCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACTTTGTAGACATATATaGGTTCTGTGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKLCRHI*VLWTPE
Trigger: CTCTGGAGTCCACAGAACCCATATATGTCTACAAAG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ATATCGAGAATGAATGGCAAGCCTACATATCTTTGCAAGTCCTTCTCTTTCCTCATATTTTGGATTACTTaGAAAGAGAAGCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ISRMNGKPTYLCKSFSFLIFWIT*KEKLPG
Trigger: ACCTGGCAGCTTCTCTTTTCAAGTAATCCAAAATAT...GAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565362.5
CDS-3UTR GCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGTCAGGCACATATTTGTaGCAAAATCCCAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQSGTYL*QNPSEA
Trigger: TGCTTCACTGGGATTTTGGCACAAATATGTGCCTGA...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR GCA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTAGTCCCACTGTATATTaGAACTTGATCGTACTAAAG +
Preference number: 4 (lower is better)
Translates to: LIYLGLCLERARVLLVDTSPTVY*NLIVLK
Trigger: CTTTAGTACGATCAAGTTGCAATATACAGTGGGACT...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAGTCCCACTGTATATTaGAACTTGATCGTACTAAAG +
Preference number: 4 (lower is better)
Translates to: HILRLMFRKSKGATGRHLSPTVY*NLIVLK
Trigger: CTTTAGTACGATCAAGTTGCAATATACAGTGGGACT...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR GCA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCCTCCCCCATTTTATCTaGTATACTTCATTGCACCAA +
Preference number: 4 (lower is better)
Translates to: YLLYFIAPNREDCLIICTLPHFI*YTSLHQ
Trigger: TTGGTGCAATGAAGTATAGCAGATAAAATGGGGGAG...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCATATCGAGAATGAATaGCAAGCCTACATATCTTTG +
Preference number: 4 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFHIENE*QAYISL
Trigger: CAAAGATATGTAGGCTTGCCATTCATTCTCGATATG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGCTTTGTAGACATATATaGGTTCTGTGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQLCRHI*VLWTPE
Trigger: CTCTGGAGTCCACAGAACCCATATATGTCTACAAAG...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTTCATATCGAGAATaGATGGCAAGCCTACATATC +
Preference number: 4 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQSSYRE*MASLHI
Trigger: GATATGTAGGCTTGCCATTCATTCTCGATATGAAGA...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR TCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTAGAACAAAGATACTTTaGCATCTTTATCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSRTKIL*HLYHSR
Trigger: CCTGCTGTGATAAAGATGTCAAAGTATCTTTGTTCT...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR TCA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAAGAACAAAGATACTTTaGCATCTTTATCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKRTKIL*HLYHSR
Trigger: CCTGCTGTGATAAAGATGTCAAAGTATCTTTGTTCT...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR GCA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTAGTCCCACTGTATATTaGAACTTGATCGTACTAAAG +
Preference number: 4 (lower is better)
Translates to: NFIFPETILSTVSNHTMSSPTVY*NLIVLK
Trigger: CTTTAGTACGATCAAGTTGCAATATACAGTGGGACT...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CCA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTCATATCGAGAATGAATaGCAAGCCTACATATCTTTG +
Preference number: 4 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFHIENE*QAYISL
Trigger: CAAAGATATGTAGGCTTGCCATTCATTCTCGATATG...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp CCTGGGCTCAGGCGATCCTTCCGTCTCAGCTCCCACGGTGCTGTGTTACCGGCGCAGCTCCCTGTAGCCTaGACCTCTCTGGGCTCAAGT +
Preference number: 5 (lower is better)
Translates to: PGLRRSFRLSSHGAVLPAQLPVA*TSLGSS
Trigger: ACTTGAGCCCAGAGAGGTCAAGGCTACAGGGAGCTG...CGCCGGTAACACAGCACCGTGGGAGCTGAGACGGAAGGATCGCCTGAGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR CAA 90 bp TCTGAACCTCGCAGGGACCTTTTAAAAGGCTTCTGGCCTGGAAGCCTCTGCTTGCCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: SEPRRDLLKGFWPGSLCLPGSLC*VRLPEG
Trigger: GCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGG...CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAGGTCCCTGCGAGGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CAA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCCCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFPGSLC*VRLPEG
Trigger: GCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGG...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTCCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: PTAKDTASLASVKCCREPPGSLC*VRLPEG
Trigger: GCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGG...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TCCTGGGCTCAGGCGATCCTTCCGTCTCAGCTCCCACGGTGCTGTGTTACCGGCCAACCGTTGACTCAGTaGACAGGCATGCTTGATCCT +
Preference number: 5 (lower is better)
Translates to: SWAQAILPSQLPRCCVTGQPLTQ*TGMLDP
Trigger: AGGATCAAGCATGCCTGTCAACTGAGTCAACGGTTG...GCCGGTAACACAGCACCGTGGGAGCTGAGACGGAAGGATCGCCTGAGCCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR CAA 90 bp AGAAAACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCAACACCCCCTCTCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 5 (lower is better)
Translates to: RKPIQHGAHYRDLPQHPLSAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...GAGGGGGTGTTGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CAA 90 bp CTGTGGCCGCAATGGTCTCCACGAGCTCAGCAGCATCGACGTTGTCGCTCGCCAGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: LWPQWSPRAQQHRRCRSPEAVLH*PSAAPL
Trigger: AAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTC...TGGCGAGCGACAACGTCGATGCTGCTGAGCTCGTGGAGACCATTGCGGCCACAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CAA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCTGGCCTGACAGACCATaGGTGGGGCTGGCACGAATC +
Preference number: 5 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVWPDRP*VGLARI
Trigger: GATTCGTGCCAGCCCCACCAATGGTCTGTCAGGCCA...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CAA 90 bp AGGGTGATCTGCTCCGGCCCACTGGATAGGCGCTCCACCTTTTCTAAGTCTTCATCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 5 (lower is better)
Translates to: RVICSGPLDRRSTFSKSSSAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...TGAAGACTTAGAAAAGGTGGAGCGCCTATCCAGTGGGCCGGAGCAGATCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CAA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGCTCCTGTTTCTGAGTaGGGCCCAGGCGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PTAKDTASLASVKCCREPAPVSE*GPGELP
Trigger: TGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAGC...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACCCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHPGSLC*VRLPEG
Trigger: GCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGG...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLPGSLC*VRLPEG
Trigger: GCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGG...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGTGGCCTGACAGACCATaGGTGGGGCTGGCACGAATC +
Preference number: 5 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWWPDRP*VGLARI
Trigger: GATTCGTGCCAGCCCCACCAATGGTCTGTCAGGCCA...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS GCA 90 bp CATCGACGTTGTCGCTCGCCATGCCGACATAAAGGCAGCTCTTCATaGTCTTATACTCAGGGCCATATCTTGCCCACTGCCCTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: HRRCRSPCRHKGSSS*SYTQGHILPTALEW
Trigger: CCACTCCAGGGCAGTGGGCAAGATATGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACGTCGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CAA 90 bp GCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTATCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 5 (lower is better)
Translates to: AVLRKSRNGQCQRASTDLSAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...TAAGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: VAEDSPRQQPCHSSSRHSEAVLH*PSAAPL
Trigger: AAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTC...ACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCACCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPPGSLC*VRLPEG
Trigger: GCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGG...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CCACTTGAGCTTCCTGAATGCCTTTCCGAACCACTTCTGTCATGTTTTCCAGAACCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: PLELPECLSEPLLSCFPEPGSLC*VRLPEG
Trigger: GCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGG...TTCTGGAAAACATGACAGAAGTGGTTCGGAAAGGCATTCAGGAAGCTCAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CAA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGGCTCCTGTTTCTGAGTaGGGCCCAGGCGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVAPVSE*GPGELP
Trigger: TGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAGC...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CTCTGGGCTCAAGTGATTTTTCTCTCCTCTACCTCCCGAGTACTTGGGACCCCACAGTGCCTGGCCGTCTaGGAGGTCTTGTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LWAQVIFLSSTSRVLGTPQCLAV*EVLFLW
Trigger: CCAGAGAAACAAGACCTCCAAGACGGCCAGGCACTG...TGGGGTCCCAAGTACTCGGGAGGTAGAGGAGAGAAAAATCACTTGAGCCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS GCA 90 bp CAATGGTCTCCACGAGCTCAGCAGCATCGACGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCTTCATGCTCTTATACTCAGGGCCTA +
Preference number: 5 (lower is better)
Translates to: QWSPRAQQHRRCRSP*RHKGSSSCSYTQGL
Trigger: TAGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGAGCTCGTGGAGACCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000570001.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
ENST00000632212.1
CDS GCA 90 bp CAATGGTCTCCACGAGCTCAGCAGCATCGACGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCTTCATGCTCTTATACTCAGGGCCAT +
Preference number: 5 (lower is better)
Translates to: QWSPRAQQHRRCRSP*RHKGSSSCSYTQGH
Trigger: ATGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGAGCTCGTGGAGACCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CAA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCACTTTCCTGCAACCGTaGACTCAGTTGACAGGCATG +
Preference number: 5 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVTFLQP*TQLTGM
Trigger: CATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGT...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CAAAATCCTGGGCTCAGGCGATCCTTCCGTCTCAGCTCCCACGGTGCTGTGTTAACTTTCCTGCAACCGTaGACTCAGTTGACAGGCATG +
Preference number: 5 (lower is better)
Translates to: QNPGLRRSFRLSSHGAVLTFLQP*TQLTGM
Trigger: CATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGT...TAACACAGCACCGTGGGAGCTGAGACGGAAGGATCGCCTGAGCCCAGGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535621.6
CDS-3UTR CAA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 5 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVSAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGCGCCTCTGTGAAGTGTaGCAGAGAACCTGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWRLCEV*QRTWRV
Trigger: CACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCG...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTGGATGGGAGAAATGGCCTaGTGGCAGAGGACAGTCCCA +
Preference number: 5 (lower is better)
Translates to: DSKGYSQSRLCEVLQRTWMGEMA*WQRTVP
Trigger: TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCAT...CCAGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGAGCTCCTGTTTCTGAGTaGGGCCCAGGCGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRAPVSE*GPGELP
Trigger: TGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAGC...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTGGATCCTACATCTGTaGGGTCTTAGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDWILHL*GLRPPS
Trigger: GGAAGGAGGCCTAAGACCCAACAGATGTAGGATCCA...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CAA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACCAACCGTTGACTCAGTaGACAGGCATGCTTGATCCT +
Preference number: 5 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDQPLTQ*TGMLDP
Trigger: AGGATCAAGCATGCCTGTCAACTGAGTCAACGGTTG...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CCTGGACCGGAGAAAACCAATTCAGCACGGAGCCCACTACAGGGATCTGCCGCACGTGACTCCTGCACCTaGTGCTTTGTAGACATATAT +
Preference number: 5 (lower is better)
Translates to: PGPEKTNSARSPLQGSAARDSCT*CFVDIY
Trigger: ATATATGTCTACAAAGCACAAGGTGCAGGAGTCACG...TGCGGCAGATCCCTGTAGTGGGCTCCGTGCTGAATTGGTTTTCTCCGGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CAA 90 bp AGTCCCACTGTATATTGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACCCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: SPTVYCNLIVLKTDSKGYPGSLC*VRLPEG
Trigger: GCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGG...GTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCAATATACAGTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAATGGCCTGACAGACCATaGGTGGGGCTGGCACGAATC +
Preference number: 5 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCEWPDRP*VGLARI
Trigger: GATTCGTGCCAGCCCCACCAATGGTCTGTCAGGCCA...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS TCA 90 bp TCTGGAAGTCTCATGGGCAATACAAAAAGAGGTTTGCCTCACCTCTaGAGGCGAGAAAGCAGCCATAGGACTGCACCCAGTTCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: SGSLMGNTKRGLPHL*RRESSHRTAPSSLP
Trigger: GGGGAGAGAACTGGGTGCAGTCCTATGGCTGCTTTCTCGCCTTCAGAGGTGAGGCAAACCTCTTTTTGTATTGCCCATGAGACTTCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566633.1
ENST00000570001.5
ENST00000632212.1
ENST00000633964.1
CDS CCA 90 bp AGACCTGCTGTTGCTTCCACTTCCTGCTTGAACTCTTCACGCAACTaGAGCGTACAGCACAGCACTGGCAGTTTGCTTTCTATGCAGGCT +
Preference number: 5 (lower is better)
Translates to: RPAVASTSCLNSSRN*SVQHSTGSLLSMQA
Trigger: AGCCTGCATAGAAAGCAAACTGCCAGTGCTGTGCTGTACGCTCCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGCAACAGCAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000566633.1
ENST00000569715.5
ENST00000570001.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
ENST00000632212.1
ENST00000633964.1
CDS-3UTR CAA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCCAACCGTTGACTCAGTaGACAGGCATGCTTGATCCT +
Preference number: 5 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFQPLTQ*TGMLDP
Trigger: AGGATCAAGCATGCCTGTCAACTGAGTCAACGGTTG...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTACTTTCCTGCAACCGTaGACTCAGTTGACAGGCATG +
Preference number: 5 (lower is better)
Translates to: PTAKDTASLASVKCCREPTFLQP*TQLTGM
Trigger: CATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGT...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTCACAGCACTGGCAGTTaGCTTTCTATGCAGGCTACG +
Preference number: 5 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGHSTGS*LSMQAT
Trigger: CGTAGCCTGCATAGAAAGCAAACTGCCAGTGCTGTG...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CAA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGTCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 5 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQSAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp TCTGAACCTCGCAGGGACCTTTTAAAAGGCTTCTGGCCTGGAAGCCTCTGCTTGCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: SEPRRDLLKGFWPGSLCLLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...CAAGCAGAGGCTTCCAGGCCAGAAGCCTTTTAAAAGGTCCCTGCGAGGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CAA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGEAVLH*PSAAPL
Trigger: AAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTC...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CAA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGCCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVPGSLC*VRLPEG
Trigger: GCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGG...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp GTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCGCCTCTGTGAAGTGTaGCAGAGAACCTGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: VLKTDSKGYSQSRLCEVLRLCEV*QRTWRV
Trigger: CACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCG...CAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTGCTCCTGTTTCTGAGTaGGGCCCAGGCGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFAPVSE*GPGELP
Trigger: TGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAGC...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGCACAGCACTGGCAGTTaGCTTTCTATGCAGGCTACG +
Preference number: 5 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLHSTGS*LSMQAT
Trigger: CGTAGCCTGCATAGAAAGCAAACTGCCAGTGCTGTG...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCCACAGCACTGGCAGTTaGCTTTCTATGCAGGCTACG +
Preference number: 5 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLHSTGS*LSMQAT
Trigger: CGTAGCCTGCATAGAAAGCAAACTGCCAGTGCTGTG...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGGCTTCCACTTCCTGCTaGAACTCTTCACGCAACTGG +
Preference number: 5 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLASTSC*NSSRNW
Trigger: CCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGC...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TGCAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCGCTTCCACTTCCTGCTaGAACTCTTCACGCAACTGG +
Preference number: 5 (lower is better)
Translates to: CNLIVLKTDSKGYSQSRLASTSC*NSSRNW
Trigger: CCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGC...GAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTTCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 5 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFSAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp CGTTGGAGGCAGCGTGACTCCTGCACCTTGTGCTTTGTAGACATATATGGGTTCCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: RWRQRDSCTLCFVDIYGFLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...GAACCCATATATGTCTACAAAGCACAAGGTGCAGGAGTCACGCTGCCTCCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CAA 90 bp TCACTCAAAGCATCTGAACCTCGCAGGGACCTTTTAAAAGGCTTCTGGCCTGGAGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: SLKASEPRRDLLKGFWPGEAVLH*PSAAPL
Trigger: AAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTC...TCCAGGCCAGAAGCCTTTTAAAAGGTCCCTGCGAGGTTCAGATGCTTTGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS-3UTR CAA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCCCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: YLLYFIAPNREDCLIICTPGSLC*VRLPEG
Trigger: GCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGG...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTCCTGGAAGCCTCTGCTaGGTGCGACTGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: NFIFPETILSTVSNHTMSPGSLC*VRLPEG
Trigger: GCCCTCGGGCAGTCGCACCAAGCAGAGGCTTCCAGG...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp GTGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTTGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 5 (lower is better)
Translates to: VAEDSPRQQPCHSSSRHSCFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...ACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTTGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 5 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPCFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCTGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 5 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVCFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACACGCCTCTGTGAAGTGTaGCAGAGAACCTGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTRLCEV*QRTWRV
Trigger: CACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCG...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAACGCCTCTGTGAAGTGTaGCAGAGAACCTGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCERLCEV*QRTWRV
Trigger: CACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCG...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCTGAGCACAGTCTGTACTaGTGTGCCAATTTTAAAAGC +
Preference number: 5 (lower is better)
Translates to: AEDSPRQQPCHSSSRHSPEHSLY*CANFKS
Trigger: GCTTTTAAAATTGGCACACAAGTACAGACTGTGCTC...AGGACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS GCA 90 bp TCCATACAAGGTCTGGAAGTCTCATGGGCAATACAAAAAGAGGTTTaGCTCACCTCTGAAGGCGAGAAAGCAGCCATAGGACTGCACCCA +
Preference number: 5 (lower is better)
Translates to: SIQGLEVSWAIQKEV*LTSEGEKAAIGLHP
Trigger: TGGGTGCAGTCCTATGGCTGCTTTCTCGCCTTCAGAGGTGAGGCAAACCTCTTTTTGTATTGCCCATGAGACTTCCAGACCTTGTATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566633.1
ENST00000570001.5
ENST00000632212.1
ENST00000633964.1
CDS-3UTR CAA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGCAACCGTTGACTCAGTaGACAGGCATGCTTGATCCT +
Preference number: 5 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLQPLTQ*TGMLDP
Trigger: AGGATCAAGCATGCCTGTCAACTGAGTCAACGGTTG...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TTTCAGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACACAGCACTGGCAGTTaGCTTTCTATGCAGGCTACG +
Preference number: 5 (lower is better)
Translates to: FQVSQKLDCWIKKAQGPLHSTGS*LSMQAT
Trigger: CGTAGCCTGCATAGAAAGCAAACTGCCAGTGCTGTG...TAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACACAGCACTGGCAGTTaGCTTTCTATGCAGGCTACG +
Preference number: 5 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAHSTGS*LSMQAT
Trigger: CGTAGCCTGCATAGAAAGCAAACTGCCAGTGCTGTG...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACGCTTCCACTTCCTGCTaGAACTCTTCACGCAACTGG +
Preference number: 5 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHASTSC*NSSRNW
Trigger: CCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGC...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 5 (lower is better)
Translates to: PHILRLMFRKSKGATGRHSAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCAGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAEAVLH*PSAAPL
Trigger: AAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTC...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp TGGCAGAGGACAGTCCCAGACAGCAGCCTTGCCACAGCTCAAGTAGACACAGTCCAGTCCCACTGTATATaGCAACTTGATCGTACTAAA +
Preference number: 5 (lower is better)
Translates to: WQRTVPDSSLATAQVDTVQSHCI*QLDRTK
Trigger: TTTAGTACGATCAAGTTGCAATATACAGTGGGACTG...GACTGTGTCTACTTGAGCTGTGGCAAGGCTGCTGTCTGGGACTGTCCTCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACGAGCACAGTCTGTACTaGTGTGCCAATTTTAAAAGC +
Preference number: 5 (lower is better)
Translates to: DAVLRKSRNGQCQRASTDEHSLY*CANFKS
Trigger: GCTTTTAAAATTGGCACACAAGTACAGACTGTGCTC...GTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTGCTCCTGTTTCTGAGTaGGGCCCAGGCGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LIYLGLCLERARVLLVDTAPVSE*GPGELP
Trigger: TGGCAGCTCGCCTGGGCCCAACTCAGAAACAGGAGC...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCATGGATCCTACATCTGTaGGGTCTTAGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: VHEVRQADSPPRKPTFQAWILHL*GLRPPS
Trigger: GGAAGGAGGCCTAAGACCCAACAGATGTAGGATCCA...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CAA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGCAGGGGACAGTAAGGTaGGCTTCTCTAATGCCCACC +
Preference number: 5 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQQGTVR*ASLMPT
Trigger: GGTGGGCATTAGAGAAGCCAACCTTACTGTCCCCTG...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS GCA 90 bp ATATTAGCAAGACAATGCAGTGGAACCAGTGGGCAAAAGAGCTACTaGGAGTGTCTCCAGACCACAAACTTTCTGGAAGTGTGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: ILARQCSGTSGQKSY*ECLQTTNFLEVCQE
Trigger: CTCCTGGCACACTTCCAGAAAGTTTGTGGTCTGGAGACACTCGCAGTAGCTCTTTTGCCCACTGGTTCCACTGCATTGTCTTGCTAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570001.5
ENST00000632212.1
CDS-3UTR CAA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTAACTTTCCTGCAACCGTaGACTCAGTTGACAGGCATG +
Preference number: 5 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLTFLQP*TQLTGM
Trigger: CATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGT...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACACTTTCCTGCAACCGTaGACTCAGTTGACAGGCATG +
Preference number: 5 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHTFLQP*TQLTGM
Trigger: CATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGT...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCAACTTTCCTGCAACCGTaGACTCAGTTGACAGGCATG +
Preference number: 5 (lower is better)
Translates to: VHEVRQADSPPRKPTFQATFLQP*TQLTGM
Trigger: CATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGT...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp TTTCAGATTTTAACCAGGTGGGTGCTACGTAGCACACGGAAGAGCAAGCTCTTAGCTTCCACTTCCTGCTaGAACTCTTCACGCAACTGG +
Preference number: 5 (lower is better)
Translates to: FQILTRWVLRSTRKSKLLASTSC*NSSRNW
Trigger: CCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGC...TAAGAGCTTGCTCTTCCGTGTGCTACGTAGCACCCACCTGGTTAAAATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCTTCCACTTCCTGCTaGAACTCTTCACGCAACTGG +
Preference number: 5 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQASTSC*NSSRNW
Trigger: CCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGC...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGTCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 5 (lower is better)
Translates to: HILRLMFRKSKGATGRHLSAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 5 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVSAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACACTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: YMKLDKLTPLLESLPFRHLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...GTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp GTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: VHEVRQADSPPRKPTFQALLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...TGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGACGTGACTCCTGCACCTaGTGCTTTGTAGACATATAT +
Preference number: 5 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRRDSCT*CFVDIY
Trigger: ATATATGTCTACAAAGCACAAGGTGCAGGAGTCACG...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTCTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: PTAKDTASLASVKCCREPLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp ACGCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTCTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: TQYFGKVGTGSASELLLTLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...AGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGTGGCCTGACAGACCATaGGTGGGGCTGGCACGAATC +
Preference number: 5 (lower is better)
Translates to: HILRLMFRKSKGATGRHLWPDRP*VGLARI
Trigger: GATTCGTGCCAGCCCCACCAATGGTCTGTCAGGCCA...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS CCA 90 bp GTGGGCAAAAGAGCTACTGCGAGTGTCTCCAGACCACAAACTTTCTaGAAGTGTGCCAGGAGTAAAGAGAAAGTCACAGGAAAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: VGKRATASVSRPQTF*KCARSKEKVTGKPF
Trigger: AAAAGGCTTTCCTGTGACTTTCTCTTTACTCCTGGCACACTTCCAGAAAGTTTGTGGTCTGGAGACACTCGCAGTAGCTCTTTTGCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570001.5
ENST00000632212.1
CDS-3UTR CAA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGCAACCGTTGACTCAGTaGACAGGCATGCTTGATCCT +
Preference number: 5 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQQPLTQ*TGMLDP
Trigger: AGGATCAAGCATGCCTGTCAACTGAGTCAACGGTTG...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTCACAGCACTGGCAGTTaGCTTTCTATGCAGGCTACG +
Preference number: 5 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFHSTGS*LSMQAT
Trigger: CGTAGCCTGCATAGAAAGCAAACTGCCAGTGCTGTG...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp GTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGCGTGACTCCTGCACCTaGTGCTTTGTAGACATATAT +
Preference number: 5 (lower is better)
Translates to: VSQKLDCWIKKAQGPLLTRDSCT*CFVDIY
Trigger: ATATATGTCTACAAAGCACAAGGTGCAGGAGTCACG...CGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGACTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTCAGTCCCACTGTATATaGCAACTTGATCGTACTAAA +
Preference number: 5 (lower is better)
Translates to: PTAKDTASLASVKCCREPQSHCI*QLDRTK
Trigger: TTTAGTACGATCAAGTTGCAATATACAGTGGGACTG...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATATGGGAGAAATGGCCTaGTGGCAGAGGACAGTCCCA +
Preference number: 5 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYMGEMA*WQRTVP
Trigger: TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCAT...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGAACCTATCTGCTATACTTCATaGCACCAAATAGGGAAGACT +
Preference number: 5 (lower is better)
Translates to: PTAKDTASLASVKCCREPICYTS*HQIGKT
Trigger: AGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGAT...AGGTTCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACCACAGCACTGGCAGTTaGCTTTCTATGCAGGCTACG +
Preference number: 5 (lower is better)
Translates to: PHILRLMFRKSKGATGRHHSTGS*LSMQAT
Trigger: CGTAGCCTGCATAGAAAGCAAACTGCCAGTGCTGTG...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACGCTTCCACTTCCTGCTaGAACTCTTCACGCAACTGG +
Preference number: 5 (lower is better)
Translates to: PHILRLMFRKSKGATGRHASTSC*NSSRNW
Trigger: CCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGC...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGTCAGCAGCATCGACGTaGTCGCTCGCCATGCCGACA +
Preference number: 5 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQSAAST*SLAMPT
Trigger: TGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGA...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp TATTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: YLQSHNHCSPSSLAVPLYEAVLH*PSAAPL
Trigger: AAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTC...ATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGTGACTCCTGCACCTaGTGCTTTGTAGACATATAT +
Preference number: 5 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLRDSCT*CFVDIY
Trigger: ATATATGTCTACAAAGCACAAGGTGCAGGAGTCACG...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGCAGAGACAGTCCCACTGTATATaGCAACTTGATCGTACTAAA +
Preference number: 5 (lower is better)
Translates to: KTDSKGYSQSRLCEVLQRQSHCI*QLDRTK
Trigger: TTTAGTACGATCAAGTTGCAATATACAGTGGGACTG...TCTCTGCAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTATGGGAGAAATGGCCTaGTGGCAGAGGACAGTCCCA +
Preference number: 5 (lower is better)
Translates to: LIYLGLCLERARVLLVDTMGEMA*WQRTVP
Trigger: TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCAT...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCATGGGAGAAATGGCCTaGTGGCAGAGGACAGTCCCA +
Preference number: 5 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFMGEMA*WQRTVP
Trigger: TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCAT...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CAACTTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGGAGCACAGTCTGTACTaGTGTGCCAATTTTAAAAGC +
Preference number: 5 (lower is better)
Translates to: QLDRTKDRQQRIQPVSPLEHSLY*CANFKS
Trigger: GCTTTTAAAATTGGCACACAAGTACAGACTGTGCTC...CAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGTTGGAGCACAGTCTGTACTaGTGTGCCAATTTTAAAAGC +
Preference number: 5 (lower is better)
Translates to: VLKTDSKGYSQSRLCEVLEHSLY*CANFKS
Trigger: GCTTTTAAAATTGGCACACAAGTACAGACTGTGCTC...CAACACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GTAGACACAGTCCTTACTAAGTCTCCACGAAGAGCAGTAGCTGGGGAGGGCTTCAAAACCCCCTGCATTTaGACAAGTGTAAATGTCAAA +
Preference number: 5 (lower is better)
Translates to: VDTVLTKSPRRAVAGEGFKTPCI*TSVNVK
Trigger: TTTGACATTTACACTTGTCAAAATGCAGGGGGTTTT...GAAGCCCTCCCCAGCTACTGCTCTTCGTGGAGACTTAGTAAGGACTGTGTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AGAGGAGAACCTACCTCTCACTGGTCTATCGGCAGCTATTTCAGGTACGTGGGTATCTGCTATACTTCATaGCACCAAATAGGGAAGACT +
Preference number: 5 (lower is better)
Translates to: RGEPTSHWSIGSYFRYVGICYTS*HQIGKT
Trigger: AGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGAT...ACCCACGTACCTGAAATAGCTGCCGATAGACCAGTGAGAGGTAGGTTCTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CAA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCAGGGGACAGTAAGGTaGGCTTCTCTAATGCCCACC +
Preference number: 5 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFQGTVR*ASLMPT
Trigger: GGTGGGCATTAGAGAAGCCAACCTTACTGTCCCCTG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CAA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTCACAGCACTGGCAGTTaGCTTTCTATGCAGGCTACG +
Preference number: 5 (lower is better)
Translates to: LIYLGLCLERARVLLVDTHSTGS*LSMQAT
Trigger: CGTAGCCTGCATAGAAAGCAAACTGCCAGTGCTGTG...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGGCTTCCACTTCCTGCTaGAACTCTTCACGCAACTGG +
Preference number: 5 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVASTSC*NSSRNW
Trigger: CCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGC...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: PHILRLMFRKSKGATGRHLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFEAVLH*PSAAPL
Trigger: AAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTC...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVEAVLH*PSAAPL
Trigger: AAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTC...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAACTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCELSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGACACTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: SQKLDCWIKKAQGPLLTTLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...TGTCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAATGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 5 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCECFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAACGCCTCTGTGAAGTGTaGCAGAGAACCTGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKRLCEV*QRTWRV
Trigger: CACTCTCCAGGTTCTCTGCAACACTTCACAGAGGCG...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp ATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAGTGCAGTCCCACTGTATATaGCAACTTGATCGTACTAAA +
Preference number: 5 (lower is better)
Translates to: IVLKTDSKGYSQSRLCEVQSHCI*QLDRTK
Trigger: TTTAGTACGATCAAGTTGCAATATACAGTGGGACTG...CACTTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTATGGGAGAAATGGCCTaGTGGCAGAGGACAGTCCCA +
Preference number: 5 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFMGEMA*WQRTVP
Trigger: TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCAT...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTAGAGCACAGTCTGTACTaGTGTGCCAATTTTAAAAGC +
Preference number: 5 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLEHSLY*CANFKS
Trigger: GCTTTTAAAATTGGCACACAAGTACAGACTGTGCTC...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp GCAGTACTTCGGAAAAGTAGGAACGGGCAGTGCCAGCGAGCTTCTACTGACTTAAAAACCCCCTGCATTTaGACAAGTGTAAATGTCAAA +
Preference number: 5 (lower is better)
Translates to: AVLRKSRNGQCQRASTDLKTPCI*TSVNVK
Trigger: TTTGACATTTACACTTGTCAAAATGCAGGGGGTTTT...TAAGTCAGTAGAAGCTCGCTGGCACTGCCCGTTCCTACTTTTCCGAAGTACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTGGATCCTACATCTGTaGGGTCTTAGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVWILHL*GLRPPS
Trigger: GGAAGGAGGCCTAAGACCCAACAGATGTAGGATCCA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CAA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTCACAGCACTGGCAGTTaGCTTTCTATGCAGGCTACG +
Preference number: 5 (lower is better)
Translates to: NFIFPETILSTVSNHTMSHSTGS*LSMQAT
Trigger: CGTAGCCTGCATAGAAAGCAAACTGCCAGTGCTGTG...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAGCTTCCACTTCCTGCTaGAACTCTTCACGCAACTGG +
Preference number: 5 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKASTSC*NSSRNW
Trigger: CCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGC...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp CTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: LRLMFRKSKGATGRHLKFLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...GAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKEAVLH*PSAAPL
Trigger: AAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTC...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCGAAGCCGTTCTTCACTaGCCTTCTGCAGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: YLLYFIAPNREDCLIICTEAVLH*PSAAPL
Trigger: AAGTGGAGCTGCAGAAGGCAAGTGAAGAACGGCTTC...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTCGTGACTCCTGCACCTaGTGCTTTGTAGACATATAT +
Preference number: 5 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFRDSCT*CFVDIY
Trigger: ATATATGTCTACAAAGCACAAGGTGCAGGAGTCACG...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGAATCTGCTATACTTCATaGCACCAAATAGGGAAGACT +
Preference number: 5 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRICYTS*HQIGKT
Trigger: AGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGAT...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCTGGATCCTACATCTGTaGGGTCTTAGGCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: YLLYFIAPNREDCLIICTWILHL*GLRPPS
Trigger: GGAAGGAGGCCTAAGACCCAACAGATGTAGGATCCA...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CAA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGCAGGGGACAGTAAGGTaGGCTTCTCTAATGCCCACC +
Preference number: 5 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQQGTVR*ASLMPT
Trigger: GGTGGGCATTAGAGAAGCCAACCTTACTGTCCCCTG...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000614833.4
ENST00000618389.4
CDS-3UTR CAA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTACTTTCCTGCAACCGTaGACTCAGTTGACAGGCATG +
Preference number: 5 (lower is better)
Translates to: NFIFPETILSTVSNHTMSTFLQP*TQLTGM
Trigger: CATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGT...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp ATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAAACTTTCCTGCAACCGTaGACTCAGTTGACAGGCATG +
Preference number: 5 (lower is better)
Translates to: ILRLMFRKSKGATGRHLKTFLQP*TQLTGM
Trigger: CATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGT...TTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGGCTTCCACTTCCTGCTaGAACTCTTCACGCAACTGG +
Preference number: 5 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQASTSC*NSSRNW
Trigger: CCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGC...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp TATCTGCTATACTTCATTGCACCAAATAGGGAAGACTGTTTAATCATCTGCACCCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: YLLYFIAPNREDCLIICTLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...GGTGCAGATGATTAAACAGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTCTTCTGCAGCTCCACTaGAGCTTCCTGAATGCCTTT +
Preference number: 5 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFLLQLH*SFLNAF
Trigger: AAAGGCATTCAGGAAGCTCAAGTGGAGCTGCAGAAG...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTCTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTTGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 5 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFCFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CATGTACATGAAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGCAGTCCCACTGTATATaGCAACTTGATCGTACTAAA +
Preference number: 5 (lower is better)
Translates to: HVHEVRQADSPPRKPTFQQSHCI*QLDRTK
Trigger: TTTAGTACGATCAAGTTGCAATATACAGTGGGACTG...CTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTTCATGTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AGGTCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTAAAAACCCCCTGCATTTaGACAAGTGTAAATGTCAAA +
Preference number: 5 (lower is better)
Translates to: RSPKSLTAGLRRHRGHYLKTPCI*TSVNVK
Trigger: TTTGACATTTACACTTGTCAAAATGCAGGGGGTTTT...TAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TCTCCCAAAAGCTTGACTGCTGGATTAAGAAGGCACAGGGGCCATTACTTACGAAAAACCCCCTGCATTTaGACAAGTGTAAATGTCAAA +
Preference number: 5 (lower is better)
Translates to: SPKSLTAGLRRHRGHYLRKTPCI*TSVNVK
Trigger: TTTGACATTTACACTTGTCAAAATGCAGGGGGTTTT...TCGTAAGTAATGGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TTGATCGTACTAAAGACCGACAGCAAAGGATACAGCCAGTCTCGCCTCTGTGAAAAAACCCCCTGCATTTaGACAAGTGTAAATGTCAAA +
Preference number: 5 (lower is better)
Translates to: LIVLKTDSKGYSQSRLCEKTPCI*TSVNVK
Trigger: TTTGACATTTACACTTGTCAAAATGCAGGGGGTTTT...TTCACAGAGGCGAGACTGGCTGTATCCTTTGCTGTCGGTCTTTAGTACGATCAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CTTTACAAACGGTATATAATGGGAGAAATGGCCTTGTGGCAGAGGACAGTCCCAATCTGCTATACTTCATaGCACCAAATAGGGAAGACT +
Preference number: 5 (lower is better)
Translates to: LYKRYIMGEMALWQRTVPICYTS*HQIGKT
Trigger: AGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGAT...TGGGACTGTCCTCTGCCACAAGGCCATTTCTCCCATTATATACCGTTTGTAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CCTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 5 (lower is better)
Translates to: PHILRLMFRKSKGATGRHCFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...GTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AAGTTAGACAAGCTGACTCCCCTCCTAGAAAGCCTACCTTTCAGGCACATATTTATCTGCTATACTTCATaGCACCAAATAGGGAAGACT +
Preference number: 5 (lower is better)
Translates to: KLDKLTPLLESLPFRHIFICYTS*HQIGKT
Trigger: AGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGAT...AAATATGTGCCTGAAAGGTAGGCTTTCTAGGAGGGGAGTCAGCTTGTCTAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTCGTGACTCCTGCACCTaGTGCTTTGTAGACATATAT +
Preference number: 5 (lower is better)
Translates to: NFIFPETILSTVSNHTMSRDSCT*CFVDIY
Trigger: ATATATGTCTACAAAGCACAAGGTGCAGGAGTCACG...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp ATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTTTCGTGACTCCTGCACCTaGTGCTTTGTAGACATATAT +
Preference number: 5 (lower is better)
Translates to: MFRKSKGATGRHLKFEVFRDSCT*CFVDIY
Trigger: ATATATGTCTACAAAGCACAAGGTGCAGGAGTCACG...AAACACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp CTCATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTCTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LIYLGLCLERARVLLVDTLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...AGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGAAATTCGAAGTGTGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 5 (lower is better)
Translates to: LMFRKSKGATGRHLKFEVCFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...CACTTCGAATTTCAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp TTTACAATCCCACAATCACTGCTCTCCTTCAAGTCTAGCAGTCCCACTGTATATATCTGCTATACTTCATaGCACCAAATAGGGAAGACT +
Preference number: 5 (lower is better)
Translates to: FTIPQSLLSFKSSSPTVYICYTS*HQIGKT
Trigger: AGTCTTCCCTATTTGGTGCAATGAAGTATAGCAGAT...ATATACAGTGGGACTGCTAGACTTGAAGGAGAGCAGTGATTGTGGGATTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGCGTGACTCCTGCACCTaGTGCTTTGTAGACATATAT +
Preference number: 5 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQRDSCT*CFVDIY
Trigger: ATATATGTCTACAAAGCACAAGGTGCAGGAGTCACG...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTCTTTCAGGCACATATTaGTGCCAAAATCCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: NFIFPETILSTVSNHTMSLSGTY*CQNPSE
Trigger: TTCACTGGGATTTTGGCACAAATATGTGCCTGAAAG...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
CDS-3UTR CAA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTTGTTTTACCAAAAAGTaGCCACGGGCAACCTCATAT +
Preference number: 5 (lower is better)
Translates to: NFIFPETILSTVSNHTMSCFTKK*PRATSY
Trigger: ATATGAGGTTGCCCGTGGCAACTTTTTGGTAAAACA...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CATATACTTAGGCTTATGTTTAGAAAGAGCAAGGGTGCTACTGGTAGACACTTGCAGTCCCACTGTATATaGCAACTTGATCGTACTAAA +
Preference number: 5 (lower is better)
Translates to: HILRLMFRKSKGATGRHLQSHCI*QLDRTK
Trigger: TTTAGTACGATCAAGTTGCAATATACAGTGGGACTG...CAAGTGTCTACCAGTAGCACCCTTGCTCTTTCTAAACATAAGCCTAAGTATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp AACTTCATCTTCCCTGAAACAATACTCAGTACAGTCTCAAACCACACAATGAGTGAGCACAGTCTGTACTaGTGTGCCAATTTTAAAAGC +
Preference number: 5 (lower is better)
Translates to: NFIFPETILSTVSNHTMSEHSLY*CANFKS
Trigger: GCTTTTAAAATTGGCACACAAGTACAGACTGTGCTC...ACTCATTGTGTGGTTTGAGACTGTACTGAGTATTGTTTCAGGGAAGATGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS-3UTR CAA 90 bp CAAGCCTACATATCTTTGCAAGTCCTTCTCTTTCCTCTTCGTGGAAATAAGCACAATATTTTGGATTACTaGAAAAGAGAAGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: QAYISLQVLLFPLRGNKHNILDY*KREAAR
Trigger: CCTGGCAGCTTCTCTTTTCAAGTAATCCAAAATATT...GTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565362.5
CDS CCA 90 bp CCGAGTTGCATTTTCGTTAAGCATATTGTGACTACACGTTCATCTTaGATTTCTAAGGTGGTTCAGAAAATGACCCACTCATGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: PSCIFVKHIVTTRSS*ISKVVQKMTHSCSL
Trigger: TAAAGAACATGAGTGGGTCATTTTCTGAACCACCTTAGAAATCCAAGATGAACGTGTAGTCACAATATGCTTAACGAAAATGCAACTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566633.1
ENST00000570001.5
ENST00000632212.1
ENST00000633964.1
CDS-3UTR CAA 90 bp ACAGTTCACATTTCCAATAGAACTTCATCTTCCCTGAAACAATACTCAGTACAGAAAACCCCCTGCATTTaGACAAGTGTAAATGTCAAA +
Preference number: 5 (lower is better)
Translates to: TVHISNRTSSSLKQYSVQKTPCI*TSVNVK
Trigger: TTTGACATTTACACTTGTCAAAATGCAGGGGGTTTT...CTGTACTGAGTATTGTTTCAGGGAAGATGAAGTTCTATTGGAAATGTGAACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000569715.5
ENST00000614833.4
ENST00000618389.4
ENST00000619589.4
CDS GCA 72 bp GGAGCGTACAGCACAGCACTGGCAGTTTGCTTTCTATaGAGGCTACGAGCTGATCCACATCCTCTCCCCGAG +
Preference number: 6 (lower is better)
Translates to: GAYSTALAVCFL*RLRADPHPLPE
Trigger: CTCGGGGAGAGGATGTGGATCAGCTCGTAGCCTGCATAGAAAGCAAACTGCCAGTGCTGTGCTGTACGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000566633.1
ENST00000569715.5
ENST00000570001.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
ENST00000632212.1
ENST00000633964.1
CDS GCA 72 bp CCACGAGCTCAGCAGCATCGACGTTGTCGCTCGCCATaGCGACATAAAGGCAGCTCTTCATGCTCTTATACT +
Preference number: 6 (lower is better)
Translates to: PRAQQHRRCRSP*RHKGSSSCSYT
Trigger: AGTATAAGAGCATGAAGAGCTGCCTTTATGTCGGCATGGCGAGCGACAACGTCGATGCTGCTGAGCTCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000562119.5
ENST00000563679.5
ENST00000569715.5
ENST00000570001.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
ENST00000632212.1
ENST00000633039.1
CDS GCA 72 bp TGTCGCTCGCCATGCCGACATAAAGGCAGCTCTTCATaGTCTTATACTCAGGGCCATATCTTGCCCACTGCC +
Preference number: 6 (lower is better)
Translates to: CRSPCRHKGSSS*SYTQGHILPTA
Trigger: GGCAGTGGGCAAGATATGGCCCTGAGTATAAGAGCATGAAGAGCTGCCTTTATGTCGGCATGGCGAGCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562119.5
ENST00000633039.1
CDS CCA 72 bp TCTCATCTTAAGCTCTCCGGTCCTTCTACCTGTGAGTaGTCATCTTCTGGGTGTGGGACCCCTTTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SHLKLSGPSTCE*SSSGCGTPFWK
Trigger: CTTCCAGAAAGGGGTCCCACACCCAGAAGATGACCACTCACAGGTAGAAGGACCGGAGAGCTTAAGATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000570001.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
ENST00000632212.1
CDS TCA 72 bp CTCATGGGCAATACAAAAAGAGGTTTGCCTCACCTCTaGAGGCGAGAAAGCAGCCATAGGACTGCACCCAGT +
Preference number: 6 (lower is better)
Translates to: LMGNTKRGLPHL*RRESSHRTAPS
Trigger: ACTGGGTGCAGTCCTATGGCTGCTTTCTCGCCTTCAGAGGTGAGGCAAACCTCTTTTTGTATTGCCCATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566633.1
ENST00000570001.5
ENST00000632212.1
ENST00000633964.1
CDS CCA 72 bp GTTGCTTCCACTTCCTGCTTGAACTCTTCACGCAACTaGAGCGTACAGCACAGCACTGGCAGTTTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: VASTSCLNSSRN*SVQHSTGSLLS
Trigger: AGAAAGCAAACTGCCAGTGCTGTGCTGTACGCTCCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000566633.1
ENST00000569715.5
ENST00000570001.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
ENST00000632212.1
ENST00000633964.1
CDS GCA 72 bp TCAACATATAGGAGACCTGCTGTTGCTTCCACTTCCTaGTTGAACTCTTCACGCAACTGGAGCGTACAGCAC +
Preference number: 6 (lower is better)
Translates to: STYRRPAVASTS*LNSSRNWSVQH
Trigger: GTGCTGTACGCTCCAGTTGCGTGAAGAGTTCAAGCAGGAAGTGGAAGCAACAGCAGGTCTCCTATATGTTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000566633.1
ENST00000569715.5
ENST00000570001.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
ENST00000632212.1
ENST00000633964.1
CDS GCA 72 bp GGTCTGGAAGTCTCATGGGCAATACAAAAAGAGGTTTaGCTCACCTCTGAAGGCGAGAAAGCAGCCATAGGA +
Preference number: 6 (lower is better)
Translates to: GLEVSWAIQKEV*LTSEGEKAAIG
Trigger: TCCTATGGCTGCTTTCTCGCCTTCAGAGGTGAGGCAAACCTCTTTTTGTATTGCCCATGAGACTTCCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000566633.1
ENST00000570001.5
ENST00000632212.1
ENST00000633964.1
CDS GCA 72 bp AGACAATGCAGTGGAACCAGTGGGCAAAAGAGCTACTaGGAGTGTCTCCAGACCACAAACTTTCTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: RQCSGTSGQKSY*ECLQTTNFLEV
Trigger: CACTTCCAGAAAGTTTGTGGTCTGGAGACACTCGCAGTAGCTCTTTTGCCCACTGGTTCCACTGCATTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570001.5
ENST00000632212.1
CDS CCA 72 bp AGAGCTACTGCGAGTGTCTCCAGACCACAAACTTTCTaGAAGTGTGCCAGGAGTAAAGAGAAAGTCACAGGA +
Preference number: 6 (lower is better)
Translates to: RATASVSRPQTF*KCARSKEKVTG
Trigger: TCCTGTGACTTTCTCTTTACTCCTGGCACACTTCCAGAAAGTTTGTGGTCTGGAGACACTCGCAGTAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570001.5
ENST00000632212.1
CDS CCA 72 bp CCTCTAAATATTAGCAAGACAATGCAGTGGAACCAGTaGGCAAAAGAGCTACTGCGAGTGTCTCCAGACCAC +
Preference number: 6 (lower is better)
Translates to: PLNISKTMQWNQ*AKELLRVSPDH
Trigger: GTGGTCTGGAGACACTCGCAGTAGCTCTTTTGCCCACTGGTTCCACTGCATTGTCTTGCTAATATTTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570001.5
ENST00000632212.1
CDS CAA 72 bp TTCCAGAAGCTGTGGCAAGACCAAGAAAGACATTACTaGTTTAAGGTTCTCACCTGGGGCCCAGAAGAGCTA +
Preference number: 6 (lower is better)
Translates to: FQKLWQDQERHY*FKVLTWGPEEL
Trigger: TAGCTCTTCTGGGCCCCAGGTGAGAACCTTAAACAAGTAATGTCTTTCTTGGTCTTGCCACAGCTTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565986.1
ENST00000632807.1
CDS TCA 72 bp CAGGAGTCCAGCATGGATGTTTTCCCCTTCGGGATCTaGTTTCAAACTGCTCTTATCATCATTAGCATGTTC +
Preference number: 6 (lower is better)
Translates to: QESSMDVFPFGI*FQTALIIISMF
Trigger: GAACATGCTAATGATGATAAGAGCAGTTTGAAATCAGATCCCGAAGGGGAAAACATCCATGCTGGACTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000396410.9
ENST00000450288.3
ENST00000563679.5
ENST00000569715.5
ENST00000570001.5
ENST00000614833.4
ENST00000617553.4
ENST00000618389.4
ENST00000619589.4
ENST00000627450.2
ENST00000631842.1
ENST00000632212.1
CDS CCA 72 bp ATTTTCGTTAAGCATATTGTGACTACACGTTCATCTTaGATTTCTAAGGTGGTTCAGAAAATGACCCACTCA +
Preference number: 6 (lower is better)
Translates to: IFVKHIVTTRSS*ISKVVQKMTHS
Trigger: TGAGTGGGTCATTTTCTGAACCACCTTAGAAATCCAAGATGAACGTGTAGTCACAATATGCTTAACGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000566633.1
ENST00000570001.5
ENST00000632212.1
ENST00000633964.1