Pregenerated sensors for PDSS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000148459Ensembl transcript IDs: ENST00000491711.5
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCCCTGGGGTCTTAGGCTTCTCATCTTCATGACTGGAAGCCCTTaGGCTCTAACAGTCTATGGCTCCACGGAAGAGGTAAGATGTGTT | + |
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Preference number: 1 (lower is better) Translates to: SPWGLRLLIFMTGSP*ALTVYGSTEEVRCV Trigger: AACACATCTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCATGAAGATGAGAAGCCTAAGACCCCAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTGGGAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTTAATGACTGGAAGCCCTTaGGCTCTAACAGTCTATGGC | + |
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Preference number: 2 (lower is better) Translates to: ISGNSCHSRVTSLAPGVLMTGSP*ALTVYG Trigger: GCCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCAT...TAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTCCCAGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| 3UTR-3UTR CCA 90 bp | CCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTTAGGCTTCTCATCTTCATGAGCTCTAACAGTCTATaGCTCCACGGAAGAGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: PQPSDFLSPWGLRLLIFMSSNSL*LHGRGK Trigger: CTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCT...CATGAAGATGAGAAGCCTAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| 3UTR-3UTR CAA 90 bp | GAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTTAGGCTTCTCCATGACTGGAAGCCCTaGAGCTCTAACAGTCTATGG | + |
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Preference number: 3 (lower is better) Translates to: EQLPQPSDFLSPWGLRLLHDWKP*SSNSLW Trigger: CCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCATG...GAGAAGCCTAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| 3UTR CCA 72 bp | GAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTaGGGTCTTAGGCTTCTCATCTTCATGACTGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: EQLPQPSDFLSP*GLRLLIFMTGS Trigger: GCTTCCAGTCATGAAGATGAGAAGCCTAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| 3UTR CCA 72 bp | CTTCATGACTGGAAGCCCTTGAGCTCTAACAGTCTATaGCTCCACGGAAGAGGTAAGATGTGTTTGATTTTG | + |
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Preference number: 3 (lower is better) Translates to: LHDWKPLSSNSL*LHGRGKMCLIL Trigger: CAAAATCAAACACATCTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR GCA 90 bp | TTCATTTCTGGGAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCATTTCTGGGAACAGCTaGCACAGCCGAGTGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: FISGNSCHSRVTSLAPGVISGNS*HSRVTS Trigger: GGAAGTCACTCGGCTGTGGCAGCTGTTCCCAGAAAT...GACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTCCCAGAAATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR CCA 90 bp | ATTTCTGGGAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTTAGACTTCCTTAGCCCCTaGGGTCTTAGGCTTCTCATC | + |
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Preference number: 4 (lower is better) Translates to: ISGNSCHSRVTSLAPGVLDFLSP*GLRLLI Trigger: GATGAGAAGCCTAAGACCCCAGGGGCTAAGGAAGTC...TAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTCCCAGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR TCA 90 bp | ATTTCTGGGAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTTAGGCTGGCGGTCTTCTTaGATGTCTTCTCAAGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ISGNSCHSRVTSLAPGVLGWRSS*MSSQGS Trigger: ACTACCTTGAGAAGACATTCAAGAAGACCGCCAGCC...TAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTCCCAGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR GCA 90 bp | ATTTCTGGGAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTTAAGTGCTTACAGCAGCTaGCAGTTTTTCCCTGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: ISGNSCHSRVTSLAPGVLSAYSS*QFFPGS Trigger: ACTGCCAGGGAAAAACTGGCAGCTGCTGTAAGCACT...TAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTCCCAGAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR CCA 90 bp | CCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTTAGGCTTCTCATCTTCATGGTTGGTTTGCCCATCTaGTCAGAACACGAGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PQPSDFLSPWGLRLLIFMVGLPI*SEHEVK Trigger: CTTCACCTCGTGTTCTGACCAGATGGGCAAACCAAC...CATGAAGATGAGAAGCCTAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR TCA 90 bp | CCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTTAGGCTTCTCATCTTCATGGAGGTAAGATGTGTTTaGTTTTGGCCACGTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PQPSDFLSPWGLRLLIFMEVRCV*FWPRQC Trigger: GCACTGACGTGGCCAAAATCAAACACATCTTACCTC...CATGAAGATGAGAAGCCTAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR TCA 90 bp | CATGACTGGAAGCCCTTGAGCTCTAACAGTCTATGGCTCCACGGAAGAGGTAAGGGCTTCTCATCTTCATaGCTGGAAGCCCTTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: HDWKPLSSNSLWLHGRGKGFSSS*LEALEL Trigger: GAGCTCAAGGGCTTCCAGTCATGAAGATGAGAAGCC...CTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR CCA 90 bp | ATTTCTGGGAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTTAGAGGGCATCTCTTTCTaGGGATGGTCGAAGTTTACT | + |
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Preference number: 4 (lower is better) Translates to: ISGNSCHSRVTSLAPGVLEGISF*GWSKFT Trigger: AGTAAACTTCGACCATCCCCAGAAAGAGATGCCCTC...TAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTCCCAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR CCA 90 bp | TTCATTTCTGGGAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTCTCATCTTCATGACTaGAAGCCCTTGAGCTCTAAC | + |
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Preference number: 4 (lower is better) Translates to: FISGNSCHSRVTSLAPGVSHLHD*KPLSSN Trigger: GTTAGAGCTCAAGGGCTTCCAGTCATGAAGATGAGA...GACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTCCCAGAAATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR GCA 90 bp | CATGACTGGAAGCCCTTGAGCTCTAACAGTCTATGGCTCCACGGAAGAGGTAAGCAGCTGATGTTGGTTTaGCCATCTGGTCAGAACACG | + |
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Preference number: 4 (lower is better) Translates to: HDWKPLSSNSLWLHGRGKQLMLV*PSGQNT Trigger: CGTGTTCTGACCAGATGGGCAAACCAACATCAGCTG...CTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR GCA 90 bp | CATGACTGGAAGCCCTTGAGCTCTAACAGTCTATGGCTCCACGGAAGAGGTAAGTTTTGGCCACGTCAGTaGTTACAGCAGCTGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: HDWKPLSSNSLWLHGRGKFWPRQ*LQQLPV Trigger: AACTGGCAGCTGCTGTAAGCACTGACGTGGCCAAAA...CTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR CCA 90 bp | CATGACTGGAAGCCCTTGAGCTCTAACAGTCTATGGCTCCACGGAAGAGGTAAGCATAGCATTCATTTCTaGGAACAGCTGCCACAGCCG | + |
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Preference number: 4 (lower is better) Translates to: HDWKPLSSNSLWLHGRGKHSIHF*EQLPQP Trigger: CGGCTGTGGCAGCTGTTCCCAGAAATGAATGCTATG...CTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR GCA 90 bp | CCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTTAGGCTTCTCATCTTCATGTGTATTTCCAATTCGTaGCAGAGCTATAGATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PQPSDFLSPWGLRLLIFMCISNS*QSYRCC Trigger: GCAGCATCTATAGCTCTGGCACGAATTGGAAATACA...CATGAAGATGAGAAGCCTAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR CCA 90 bp | CATGACTGGAAGCCCTTGAGCTCTAACAGTCTATGGCTCCACGGAAGAGGTAAGAGCTCTAACAGTCTATaGCTCCACGGAAGAGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: HDWKPLSSNSLWLHGRGKSSNSL*LHGRGK Trigger: CTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCT...CTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR CAA 90 bp | GAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCTTAGGCTTCTCGCTGGGCGAGGTAGGTaGTTTGTTGCACACCATCAC | + |
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Preference number: 5 (lower is better) Translates to: EQLPQPSDFLSPWGLRLLAGRGR*FVAHHH Trigger: GTGATGGTGTGCAACAAACAACCTACCTCGCCCAGC...GAGAAGCCTAAGACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR CAA 90 bp | TTCATTTCTGGGAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCCATGACTGGAAGCCCTaGAGCTCTAACAGTCTATGG | + |
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Preference number: 5 (lower is better) Translates to: FISGNSCHSRVTSLAPGVHDWKP*SSNSLW Trigger: CCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCATG...GACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTCCCAGAAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR CAA 90 bp | TTCATTTCTGGGAACAGCTGCCACAGCCGAGTGACTTCCTTAGCCCCTGGGGTCAGAGGTAAGATGTGTTaGATTTTGGCCACGTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: FISGNSCHSRVTSLAPGVRGKMC*ILATSV Trigger: CACTGACGTGGCCAAAATCAAACACATCTTACCTCT...GACCCCAGGGGCTAAGGAAGTCACTCGGCTGTGGCAGCTGTTCCCAGAAATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS CCA 90 bp | GCTTCTCATCTTCATGACTGGAAGCCCTTGAGCTCTAACAGTCTATaGCTCCACGGAAGAGGTAAGATGTGTTTGATTTTGGCCACGTCA | + |
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Preference number: 5 (lower is better) Translates to: ASHLHDWKPLSSNSL*LHGRGKMCLILATS Trigger: TGACGTGGCCAAAATCAAACACATCTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCATGAAGATGAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS-3UTR CAA 90 bp | CATGACTGGAAGCCCTTGAGCTCTAACAGTCTATGGCTCCACGGAAGAGGTAAGAAGATGTGTTTGATTTaGGCCACGTCAGTGCTTACA | + |
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Preference number: 5 (lower is better) Translates to: HDWKPLSSNSLWLHGRGKKMCLI*ATSVLT Trigger: TGTAAGCACTGACGTGGCCAAAATCAAACACATCTT...CTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCTCAAGGGCTTCCAGTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS GCA 72 bp | GTGTTTGATTTTGGCCACGTCAGTGCTTACAGCAGCTaGCAGTTTTTCCCTGGCAGTGAACCTGCTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: VFDFGHVSAYSS*QFFPGSEPADR Trigger: CCTGTCAGCAGGTTCACTGCCAGGGAAAAACTGGCAGCTGCTGTAAGCACTGACGTGGCCAAAATCAAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS TCA 72 bp | ACAGTCTATGGCTCCACGGAAGAGGTAAGATGTGTTTaGTTTTGGCCACGTCAGTGCTTACAGCAGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TVYGSTEEVRCV*FWPRQCLQQLP Trigger: TGGCAGCTGCTGTAAGCACTGACGTGGCCAAAATCAAACACATCTTACCTCTTCCGTGGAGCCATAGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS CAA 72 bp | AACAGTCTATGGCTCCACGGAAGAGGTAAGATGTGTTaGATTTTGGCCACGTCAGTGCTTACAGCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: NSLWLHGRGKMC*ILATSVLTAAA Trigger: GGCAGCTGCTGTAAGCACTGACGTGGCCAAAATCAAACACATCTTACCTCTTCCGTGGAGCCATAGACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS CAA 90 bp | TCTAACAGTCTATGGCTCCACGGAAGAGGTAAGATGTGTTTGATTTaGGCCACGTCAGTGCTTACAGCAGCTGCCAGTTTTTCCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SNSLWLHGRGKMCLI*ATSVLTAAASFSLA Trigger: TGCCAGGGAAAAACTGGCAGCTGCTGTAAGCACTGACGTGGCCAAAATCAAACACATCTTACCTCTTCCGTGGAGCCATAGACTGTTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS CAA 72 bp | CTATGGCTCCACGGAAGAGGTAAGATGTGTTTGATTTaGGCCACGTCAGTGCTTACAGCAGCTGCCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LWLHGRGKMCLI*ATSVLTAAASF Trigger: AAAACTGGCAGCTGCTGTAAGCACTGACGTGGCCAAAATCAAACACATCTTACCTCTTCCGTGGAGCCATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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| CDS CAA 90 bp | TTGAGCTCTAACAGTCTATGGCTCCACGGAAGAGGTAAGATGTGTTaGATTTTGGCCACGTCAGTGCTTACAGCAGCTGCCAGTTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSSNSLWLHGRGKMC*ILATSVLTAAASFS Trigger: GGAAAAACTGGCAGCTGCTGTAAGCACTGACGTGGCCAAAATCAAACACATCTTACCTCTTCCGTGGAGCCATAGACTGTTAGAGCTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000491711.5 |
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