RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDS5B (Homo sapiens)

Ensembl gene IDs: ENSG00000083642

Ensembl transcript IDs: ENST00000315596.15, ENST00000447833.1, ENST00000450460.5, ENST00000466078.1, ENST00000474274.1, ENST00000481616.1, ENST00000482955.5, ENST00000493653.1, ENST00000498550.5

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAATGTTACCATGTGTATGGCTAAAGCATGTGACCACAAATGTATaGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCC +
Preference number: 1 (lower is better)
Translates to: SMLPCVWLKHVTTNV*GHQSKVQLSTLQQS
Trigger: GGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCCATACATTTGTGGTCACATGCTTTAGCCATACACATGGTAACATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR GCA 90 bp CTGAGGTGTAAAGTAATCCAAGAACTTCAGGACTATTTCACAATTTaGATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGC +
Preference number: 1 (lower is better)
Translates to: LRCKVIQELQDYFTI*MVVLLSEASFWCNG
Trigger: GCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGATTACTTTACACCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR CCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGTGACCACAAATGTATaGGGTCACCAAAGTAAGGTC +
Preference number: 2 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAVTTNV*GHQSKV
Trigger: GACCTTACTTTGGTGACCCCATACATTTGTGGTCAC...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR CCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGTGACCACAAATGTATaGGGTCACCAAAGTAAGGTC +
Preference number: 2 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKVTTNV*GHQSKV
Trigger: GACCTTACTTTGGTGACCCCATACATTTGTGGTCAC...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR CCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTTCAGAGGCATCCTTCTaGTGTAATGGCAGACAATTT +
Preference number: 2 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGSEASF*CNGRQF
Trigger: AAATTGTCTGCCATTACACCAGAAGGATGCCTCTGA...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR GCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGACACTGACAGATTACTaGTTAAGATCTATCCTAACA +
Preference number: 2 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKTLTDY*LRSILT
Trigger: TGTTAGGATAGATCTTAAGCAGTAATCTGTCAGTGT...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR GCA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATAAGCAGTCCCATTTTGTaGATCAAAGGCTTTATTCAG +
Preference number: 2 (lower is better)
Translates to: QINRSNKQSGTVSLKPQISSPIL*IKGFIQ
Trigger: CTGAATAAAGCCTTTGATGCACAAAATGGGACTGCT...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR GCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAAGCAGTCCCATTTTGTaGATCAAAGGCTTTATTCAG +
Preference number: 2 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKSSPIL*IKGFIQ
Trigger: CTGAATAAAGCCTTTGATGCACAAAATGGGACTGCT...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR CCA 90 bp TCTGGACAAAGTGGAATTTCATTCAAAGTTCACAAGACTGTGACAACTACAGTAATGTTACCATGTGTATaGCTAAAGCATGTGACCACA +
Preference number: 2 (lower is better)
Translates to: SGQSGISFKVHKTVTTTVMLPCV*LKHVTT
Trigger: TGTGGTCACATGCTTTAGCCATACACATGGTAACAT...TACTGTAGTTGTCACAGTCTTGTGAACTTTGAATGAAATTCCACTTTGTCCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
3UTR-3UTR CCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAATGTTACCATGTGTATaGCTAAAGCATGTGACCACA +
Preference number: 2 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKMLPCV*LKHVTT
Trigger: TGTGGTCACATGCTTTAGCCATACACATGGTAACAT...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR GCA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATAACACTGACAGATTACTaGTTAAGATCTATCCTAACA +
Preference number: 2 (lower is better)
Translates to: QINRSNKQSGTVSLKPQITLTDY*LRSILT
Trigger: TGTTAGGATAGATCTTAAGCAGTAATCTGTCAGTGT...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR CAA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCTTCAGCAGTCCCATTTaGTGCATCAAAGGCTTTATT +
Preference number: 3 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCFSSPI*CIKGFI
Trigger: AATAAAGCCTTTGATGCACAAAATGGGACTGCTGAA...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR CCA 72 bp CCATGTGTATGGCTAAAGCATGTGACCACAAATGTATaGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTT +
Preference number: 3 (lower is better)
Translates to: PCVWLKHVTTNV*GHQSKVQLSTL
Trigger: AAGAGTGGACAGTTGGACCTTACTTTGGTGACCCCATACATTTGTGGTCACATGCTTTAGCCATACACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR CAA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGGACTATTTCACAATTaGCATGGTTGTCCTCCTATC +
Preference number: 3 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAGLFHN*HGCPPI
Trigger: GATAGGAGGACAACCATGCAAATTGTGAAATAGTCC...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR CCA 72 bp ATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTaGTGTAATGGCAGACAATTTAGCACCTCTGAAGAT +
Preference number: 3 (lower is better)
Translates to: ICMVVLLSEASF*CNGRQFSTSED
Trigger: ATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR TCA 72 bp ATTCAAAGTTCACAAGACTGTGACAACTACAGTAGCTaGTATACTTGGATATACCACTTCTACGCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: IQSSQDCDNYSS*YTWIYHFYAAP
Trigger: GGGGGCAGCGTAGAAGTGGTATATCCAAGTATATCAGCTACTGTAGTTGTCACAGTCTTGTGAACTTTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
3UTR TCA 72 bp CAAAACCAATGTATGTTGATCCCACCTGAGCTGCTTTaGTATATGACAGCCTCTCATAATTACTGGTGTCAC +
Preference number: 3 (lower is better)
Translates to: QNQCMLIPPELL*YMTASHNYWCH
Trigger: GTGACACCAGTAATTATGAGAGGCTGTCATATATCAAAGCAGCTCAGGTGGGATCAACATACATTGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315596.15
3UTR GCA 72 bp AAAGTAATCCAAGAACTTCAGGACTATTTCACAATTTaGATGGTTGTCCTCCTATCAGAGGCATCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: KVIQELQDYFTI*MVVLLSEASFW
Trigger: CCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGATTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR CAA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAATTCAGCAGTCCCATTTaGTGCATCAAAGGCTTTATT +
Preference number: 3 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKFSSPI*CIKGFI
Trigger: AATAAAGCCTTTGATGCACAAAATGGGACTGCTGAA...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR-3UTR CAA 90 bp ATACTGAGGTGTAAAGTAATCCAAGAACTTCAGGACTATTTCACAATTTGCATGGGACTATTTCACAATTaGCATGGTTGTCCTCCTATC +
Preference number: 3 (lower is better)
Translates to: ILRCKVIQELQDYFTICMGLFHN*HGCPPI
Trigger: GATAGGAGGACAACCATGCAAATTGTGAAATAGTCC...CATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGATTACTTTACACCTCAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR TCA 72 bp GCCACATTTGTAATTTACATATACAGTGAAGATCACTaGAAAAGCCTCCTGTTGCACTGCAGCAAGAAATTT +
Preference number: 3 (lower is better)
Translates to: ATFVIYIYSEDH*KSLLLHCSKKF
Trigger: AAATTTCTTGCTGCAGTGCAACAGGAGGCTTTTTCAGTGATCTTCACTGTATATGTAAATTACAAATGTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR GCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTCTACCCCTCCGGGTTaGCGACTCGCTACTCCGCTC +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQASTPPG*RLATPL
Trigger: GAGCGGAGTAGCGAGTCGGCAACCCGGAGGGGTAGA...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCCCTGCTCTGATGGCTTaGTCAGTTGGAACACCCTCA +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCPALMA*SVGTPS
Trigger: TGAGGGTGTTCCAACTGATCAAGCCATCAGAGCAGG...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTTCTACCCCTCCGGGTTaGCGACTCGCTACTCCGCTC +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGSTPPG*RLATPL
Trigger: GAGCGGAGTAGCGAGTCGGCAACCCGGAGGGGTAGA...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCAGGAGAGCTTGGATTTaGGCTGCTGCTTGCATTGCT +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCRRAWI*AAACIA
Trigger: AGCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCT...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCGGAGATTCTGCTCTCTaGTGTGCTCTCCTTGACACT +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCGDSAL*CALLDT
Trigger: AGTGTCAAGGAGAGCACAGCAGAGAGCAGAATCTCC...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCTCCACCAAGAGGTTTTaGTGGTCGGCCTCTTTTACC +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCSTKRF*WSASFT
Trigger: GGTAAAAGAGGCCGACCACCAAAACCTCTTGGTGGA...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCGTTCAAGACCTGCTCTaGTGGCTTGATCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCVQDLL*WLDQLE
Trigger: TTCCAACTGATCAAGCCATCAGAGCAGGTCTTGAAC...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTCTGCTGTGCTCTCCTTaGCACTCGGTGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQALLCSP*HSVLFA
Trigger: AGCAAACAGCACCGAGTGTCAAGGAGAGCACAGCAG...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCGTATCCAAAAGCTCCTaGGACACTGTATCACCTTCA +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCVSKSS*DTVSPS
Trigger: TGAAGGTGATACAGTGTCTCAGGAGCTTTTGGATAC...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCTTCCTCAGGGTCATGTaGCCTCACTTTAAGATACTC +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCFLRVM*PHFKIL
Trigger: GAGTATCTTAAAGTGAGGTCACATGACCCTGAGGAA...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAGGAGAGCTTGGATTTaGGCTGCTGCTTGCATTGCT +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLRRAWI*AAACIA
Trigger: AGCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCT...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGCTAACAGCTGCATGCTaGTTCAGATACTCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLLTAAC*FRYSRL
Trigger: AAGGCGGGAGTATCTGAAGCAGCATGCAGCTGTTAG...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCTATGGCTCAATAGCTTaGGCTGTCCTCTTCAGTAAA +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCYGSIA*AVLFSK
Trigger: TTTACTGAAGAGGACAGCTCAAGCTATTGAGCCATA...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTCCTGCTCTGATGGCTTaGTCAGTTGGAACACCCTCA +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGPALMA*SVGTPS
Trigger: TGAGGGTGTTCCAACTGATCAAGCCATCAGAGCAGG...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCGATGGGATGTGTAAATaGGAGTACCTTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCDGMCK*EYLKQF
Trigger: GAACTGCTTAAGGTACTCTCATTTACACATCCCATC...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGCGTGATGATTTGGTCTaGGATTGCTTGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLRDDLV*DCLPAD
Trigger: ATCAGCAGGCAAGCAATCTCAGACCAAATCATCACG...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCTATGTTGATCCCACCTaGGCTGCTTTGATATATGAC +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCYVDPT*AALIYD
Trigger: GTCATATATCAAAGCAGCTCAGGTGGGATCAACATA...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR GCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTACACAACCTTCAGCCTaGTTGCAGGAGCATGTTGGA +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQATQPSA*LQEHVG
Trigger: TCCAACATGCTCCTGCAAGCAGGCTGAAGGTTGTGT...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCCTTTACAGGATCTTTTaGACAAAGGGCACAGATTGC +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCLYRIF*TKGTDC
Trigger: GCAATCTGTGCCCTTTGTGCAAAAGATCCTGTAAAG...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGCTCCTTGACACTCGGTaGTGTTTGCTTTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLLLDTR*CLLLDF
Trigger: GAAGTCCAAAAGCAAACAGCACCGAGTGTCAAGGAG...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAGATTCAGGAGATTCTaGTCTCTGCTGTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLRFRRF*SLLCSP
Trigger: AGGAGAGCACAGCAGAGAGCAGAATCTCCTGAATCT...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGATTCTGAAGCCGTATaGCCTCTTTTCCGACTTCGC +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMADSEAV*PLFRLR
Trigger: GCGAAGTCGGAAAAGAGGCCATACGGCTTCAGAATC...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTTCTTCCTCCTCCTCTaGTGCTGGAGGTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQAFFLLL*CWRSRF
Trigger: AAATCTGGACCTCCAGCACCAGAGGAGGAGGAAGAA...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCATCCTCGTCCTTTCTGTaGTGTGGACTGTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMASSSFL*CGLCGF
Trigger: GAATCCACACAGTCCACACCACAGAAAGGACGAGGA...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCTCAGAGGCATCCTTCTaGTGTAATGGCAGACAATTT +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCSEASF*CNGRQF
Trigger: AAATTGTCTGCCATTACACCAGAAGGATGCCTCTGA...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCTCTTTGAATGAGCCATaGCAGAAATATTTCTACCCC +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCSLNEP*QKYFYP
Trigger: GGGGTAGAAATATTTCTGTCATGGCTCATTCAAAGA...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTCGGGAAAGGCCTTTGTaGAGTTTCTGGGCAAACACT +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLRERPL*SFWANT
Trigger: AGTGTTTGCCCAGAAACTTCACAAAGGCCTTTCCCG...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCCAATATCCTGTACTTTaGCATAATCTGGGTCATGTG +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCQYPVL*HNLGHV
Trigger: CACATGACCCAGATTATGTCAAAGTACAGGATATTG...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCATGGTCTGAGATTGCTTaGCTGCTGATGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAWSEIA*LLMKVA
Trigger: AGCCACTTTCATCAGCAGGCAAGCAATCTCAGACCA...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGAGATTCTGCTCTCTaGTGTGCTCTCCTTGACACT +
Preference number: 4 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKGDSAL*CALLDT
Trigger: AGTGTCAAGGAGAGCACAGCAGAGAGCAGAATCTCC...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCCTGTGTGGATTCAATTaGACTAGATTCAGGAGATTC +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCLCGFN*TRFRRF
Trigger: GAATCTCCTGAATCTAGTGCAATTGAATCCACACAG...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTGATTCTGAAGCCGTATaGCCTCTTTTCCGACTTCGC +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLDSEAV*PLFRLR
Trigger: GCGAAGTCGGAAAAGAGGCCATACGGCTTCAGAATC...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTACCAAGAGGTTTTGGTaGTCGGCCTCTTTTACCCTT +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQATKRFW*SASFTL
Trigger: AAGGGTAAAAGAGGCCGACCACCAAAACCTCTTGGT...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTTCCACCAAGAGGTTTTaGTGGTCGGCCTCTTTTACC +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGSTKRF*WSASFT
Trigger: GGTAAAAGAGGCCGACCACCAAAACCTCTTGGTGGA...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTTTCTTCCTCCTCCTCTaGTGCTGGAGGTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLFFLLL*CWRSRF
Trigger: AAATCTGGACCTCCAGCACCAGAGGAGGAGGAAGAA...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTTCTTCATGAAATCCTaGGCCTTACCAGGATCAGGT +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQAFFMKS*ALPGSG
Trigger: ACCTGATCCTGGTAAGGCTCAGGATTTCATGAAGAA...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTGAAGCAAGGCTGATCTaGTGTGTGGAAAATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQAEARLI*CVENPL
Trigger: AAGAGGATTTTCCACACATCAGATCAGCCTTGCTTC...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTAAAGGAGCAGCAAATTaGTCAGGTGCAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGKGAAN*SGARRA
Trigger: TGCTCTCCTTGCACCTGATCAATTTGCTGCTCCTTT...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTAAAGGAGCAGCAAATTaGTCAGGTGCAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLKGAAN*SGARRA
Trigger: TGCTCTCCTTGCACCTGATCAATTTGCTGCTCCTTT...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCATCTTGTCAGGTTGAGTaGAGAAACGAGCTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMASCQVE*RNELVV
Trigger: TACTACCAGCTCGTTTCTTCACTCAACCTGACAAGA...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTCGTGATGATTTGGTCTaGGATTGCTTGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGRDDLV*DCLPAD
Trigger: ATCAGCAGGCAAGCAATCTCAGACCAAATCATCACG...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCACTGTTCATCAGATTCTaGAGCCGTATGGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMALFIRF*SRMASF
Trigger: AAAAGAGGCCATACGGCTTCAGAATCTGATGAACAG...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTCCACCTGAGCTGCTTTaGTATATGACAGCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGPPELL*YMTASH
Trigger: ATGAGAGGCTGTCATATATCAAAGCAGCTCAGGTGG...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR GCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAAAGCAGTTCAAGACCTaGTCTGATGGCTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAKQFKT*SDGLIS
Trigger: ACTGATCAAGCCATCAGAGCAGGTCTTGAACTGCTT...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGTAACAGGGTTCTTGTaGCAGCTTCACAATAGCACT +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAVTGFL*QLHNST
Trigger: AGTGCTATTGTGAAGCTGGCACAAGAACCCTGTTAC...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTTGGTCTGAGATTGCTTaGCTGCTGATGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLWSEIA*LLMKVA
Trigger: AGCCACTTTCATCAGCAGGCAAGCAATCTCAGACCA...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAAGCTTGGATTTGAGCTaGTGCTTGCATTGCTTACAG +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMASLDLS*CLHCLQ
Trigger: CTGTAAGCAATGCAAGCAGCAGCTCAAATCCAAGCT...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGTTTTCCTCAGGCCACTaGTGTTCATCAGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLFSSGH*CSSDSE
Trigger: TTCAGAATCTGATGAACAGCAGTGGCCTGAGGAAAA...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTACACTCGGTGCTGTTTaGTTTTGGACTTCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLTLGAV*FWTSVP
Trigger: CGGAACAGAAGTCCAAAAGCAAACAGCACCGAGTGT...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGAGATTCAGGAGATTCTaGTCTCTGCTGTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKRFRRF*SLLCSP
Trigger: AGGAGAGCACAGCAGAGAGCAGAATCTCCTGAATCT...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCGACTATTTCACAATTTaGATGGTTGTCCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCDYFTI*MVVLLS
Trigger: TGATAGGAGGACAACCATGCAAATTGTGAAATAGTC...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAGTTGTCTTTTTCCCTaGAAGCCGATCATTCATGAG +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLSCLFP*KPIIHE
Trigger: CTCATGAATGATCGGCTTCCAGGGAAAAAGACAACT...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTACCAAGAGGTTTTGGTaGTCGGCCTCTTTTACCCTT +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGTKRFW*SASFTL
Trigger: AAGGGTAAAAGAGGCCGACCACCAAAACCTCTTGGT...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGTCCTTTCTGTGGTGTaGACTGTGTGGATTCAATTG +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAVLSVV*TVWIQL
Trigger: CAATTGAATCCACACAGTCCACACCACAGAAAGGAC...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTGTGACCACAAATGTATaGGGTCACCAAAGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQAVTTNV*GHQSKV
Trigger: GACCTTACTTTGGTGACCCCATACATTTGTGGTCAC...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGTCAGAGGCATCCTTCTaGTGTAATGGCAGACAATTT +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLSEASF*CNGRQF
Trigger: AAATTGTCTGCCATTACACCAGAAGGATGCCTCTGA...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTGTATCCAAAAGCTCCTaGGACACTGTATCACCTTCA +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGVSKSS*DTVSPS
Trigger: TGAAGGTGATACAGTGTCTCAGGAGCTTTTGGATAC...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTTGAGAAGCCAATTCTaGATCCTTTGCCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQALRSQF*ILCPKH
Trigger: ATGTTTGGGGCAAAGGATTCAGAATTGGCTTCTCAA...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGAAGCAAGGCTGATCTaGTGTGTGGAAAATCCTCTT +
Preference number: 4 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKEARLI*CVENPL
Trigger: AAGAGGATTTTCCACACATCAGATCAGCCTTGCTTC...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTGCAAGGAGAGCAATATaGCCAATAGTAACCAATGGT +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQAARRAI*PIVTNG
Trigger: ACCATTGGTTACTATTGGTCATATTGCTCTCCTTGC...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGCTGTTCATCAGATTCTaGAGCCGTATGGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKLFIRF*SRMASF
Trigger: AAAAGAGGCCATACGGCTTCAGAATCTGATGAACAG...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATCTGCTGTGCTCTCCTTaGCACTCGGTGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHLLCSP*HSVLFA
Trigger: AGCAAACAGCACCGAGTGTCAAGGAGAGCACAGCAG...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTACAGGAGAGCTACCCTaGAACACATCTACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLTGELP*NTSTSS
Trigger: TGAAGAAGTAGATGTGTTTCAGGGTAGCTCTCCTGT...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR GCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTCCATGCTATCTGTTTTaGAGCATCTTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLPCYLF*SIFSSC
Trigger: GCAGCTGGAAAAGATGCTGCAAAACAGATAGCATGG...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAACACAACCTTCAGCCTaGTTGCAGGAGCATGTTGGA +
Preference number: 4 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKTQPSA*LQEHVG
Trigger: TCCAACATGCTCCTGCAAGCAGGCTGAAGGTTGTGT...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAAGCAAATTGATCAGGTaGAAGGAGAGCAATATGACC +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMASKLIR*KESNMT
Trigger: GGTCATATTGCTCTCCTTGCACCTGATCAATTTGCT...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTACAAAGGGCACAGATTaGCATATACTCAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQATKGTD*HILKWK
Trigger: CTTCCACTTGAGTATATGGCAATCTGTGCCCTTTGT...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGTTTTTCACTAACAGCTaGATGCTGCTTCAGATACTC +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLFFTNS*MLLQIL
Trigger: GAGTATCTGAAGCAGCATGCAGCTGTTAGTGAAAAA...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTAGCTGCTGCTTGCATTaGTTACAGTTTCCATTCGTG +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGSCCLH*LQFPFV
Trigger: CACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCT...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTAGCTGCTGCTTGCATTaGTTACAGTTTCCATTCGTG +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLSCCLH*LQFPFV
Trigger: CACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCT...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGTTGGATTTGAGCTGCTaGTTGCATTGCTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLLDLSC*LHCLQF
Trigger: AAACTGTAAGCAATGCAAGCAGCAGCTCAAATCCAA...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCATTTTCCTCAGGCCACTaGTGTTCATCAGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAFSSGH*CSSDSE
Trigger: TTCAGAATCTGATGAACAGCAGTGGCCTGAGGAAAA...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCAAGGTTCTGTATAGCTaGGTGAAAATTTCATTGCTA +
Preference number: 4 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCKVLYS*VKISLL
Trigger: TAGCAATGAAATTTTCACCCAGCTATACAGAACCTT...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCACATGGATACAATGAATaGCATATTTGGCTTGACGGG +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAHGYNE*HIWLDG
Trigger: CCCGTCAAGCCAAATATGCCATTCATTGTATCCATG...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTCCATTCGTGATGATTTaGTCTGAGATTGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLPFVMI*SEIACL
Trigger: CAGGCAAGCAATCTCAGACCAAATCATCACGAATGG...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCACTCTGTTTCTTCCTGTaGAATATCATCGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMALCFFL*NIIDRR
Trigger: TCTCCTGTCGATGATATTCCACAGGAAGAAACAGAG...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGCCACTTCTCCCAATCTaGACAAAGTGGAATTTCATT +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLPLLPI*TKWNFI
Trigger: AATGAAATTCCACTTTGTCCAGATTGGGAGAAGTGG...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR TCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAATGTTTCAGCAGAATaGAATGAGATGGGATGTGTA +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLNVSAE*NEMGCV
Trigger: TACACATCCCATCTCATTTCATTCTGCTGAAACATT...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGTGCTTCCTGTGTTTTTaGAAATTTGTAGTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLCFLCF*KFVVQL
Trigger: AAGCTGCACTACAAATTTTCAAAAACACAGGAAGCA...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTGCAAGGAGAGCAATATaGCCAATAGTAACCAATGGT +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGARRAI*PIVTNG
Trigger: ACCATTGGTTACTATTGGTCATATTGCTCTCCTTGC...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTAGCAAGTCTCAGACGTaGCATATCTGGTTTACTAAT +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQASKSQT*HIWFTN
Trigger: ATTAGTAAACCAGATATGTCACGTCTGAGACTTGCT...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTAAACATTGCCTAGCATaGGCTCTTCTCTCCTTTACA +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGKHCLA*ALLSFT
Trigger: TGTAAAGGAGAGAAGAGCTCATGCTAGGCAATGTTT...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTAAACATTGCCTAGCATaGGCTCTTCTCTCCTTTACA +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLKHCLA*ALLSFT
Trigger: TGTAAAGGAGAGAAGAGCTCATGCTAGGCAATGTTT...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAACTTTTCCGACTTCGCTaGCTGCCTTTAGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKLFRLR*LPLGFC
Trigger: ACAGAAACCTAAAGGCAGTCAGCGAAGTCGGAAAAG...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTATCTATGTGCACAGGTaGTATCCTCTCCAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLIYVHR*YPLQEK
Trigger: TTTCTCTTGGAGAGGATAGCACCTGTGCACATAGAT...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGAGCAAATTGATCAGGTaGAAGGAGAGCAATATGACC +
Preference number: 4 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKSKLIR*KESNMT
Trigger: GGTCATATTGCTCTCCTTGCACCTGATCAATTTGCT...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTACAAAGGGCACAGATTaGCATATACTCAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLTKGTD*HILKWK
Trigger: CTTCCACTTGAGTATATGGCAATCTGTGCCCTTTGT...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATACTAACAGCTGCATGCTaGTTCAGATACTCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: QINRSNKQSGTVSLKPQILTAAC*FRYSRL
Trigger: AAGGCGGGAGTATCTGAAGCAGCATGCAGCTGTTAG...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCACTGTGTGGATTCAATTaGACTAGATTCAGGAGATTC +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMALCGFN*TRFRRF
Trigger: GAATCTCCTGAATCTAGTGCAATTGAATCCACACAG...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTATTTTCCTTAGTAGCTaGTTGTTTGGAGCGTCCTAC +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGIFLSS*LFGASY
Trigger: GTAGGACGCTCCAAACAAGCAGCTACTAAGGAAAAT...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAATTTAAATTCAAGCTaGGGTAAAACAGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLNLNSS*GKTESS
Trigger: GCTGCTCTCTGTTTTACCCCAGCTTGAATTTAAATT...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTAGTTGTCTTTTTCCCTaGAAGCCGATCATTCATGAG +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLSCLFP*KPIIHE
Trigger: CTCATGAATGATCGGCTTCCAGGGAAAAAGACAACT...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCACATTTTTGCATCATCTaGTCCTTGGGCATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAHFCII*SLGIFC
Trigger: ACAAAAGATGCCCAAGGACCAGATGATGCAAAAATG...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAGAAGTTTTCATTGTTaGCTCTTCTTTTGGTGTACC +
Preference number: 4 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLRSFHC*LFFWCT
Trigger: GGTACACCAAAAGAAGAGCCAACAATGAAAACTTCT...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
3UTR CAA 72 bp TCCAAGAACTTCAGGACTATTTCACAATTTGCATGGTaGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATG +
Preference number: 4 (lower is better)
Translates to: SKNFRTISQFAW*SSYQRHPSGVM
Trigger: CATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGTCTTTGAATGAGCCATaGCAGAAATATTTCTACCCC +
Preference number: 4 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKSLNEP*QKYFYP
Trigger: GGGGTAGAAATATTTCTGTCATGGCTCATTCAAAGA...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAACGGGAAAGGCCTTTGTaGAGTTTCTGGGCAAACACT +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKRERPL*SFWANT
Trigger: AGTGTTTGCCCAGAAACTTCACAAAGGCCTTTCCCG...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGTTTTTCACTAACAGCTaGATGCTGCTTCAGATACTC +
Preference number: 4 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKFFTNS*MLLQIL
Trigger: GAGTATCTGAAGCAGCATGCAGCTGTTAGTGAAAAA...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTAAATTTGCTACAGAGTaGAGCAAGATAACCTCACTG +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLKFATE*SKITSL
Trigger: CAGTGAGGTTATCTTGCTGCACTCTGTAGCAAATTT...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTCATTTTTGCATCATCTaGTCCTTGGGCATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLHFCII*SLGIFC
Trigger: ACAAAAGATGCCCAAGGACCAGATGATGCAAAAATG...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCTGGACAAAGTGGAATTTCATTCAAAGTTCACAAGACTGTGACAACTACAGTATCCTCGTCCTTTCTGTaGTGTGGACTGTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: SGQSGISFKVHKTVTTTVSSSFL*CGLCGF
Trigger: GAATCCACACAGTCCACACCACAGAAAGGACGAGGA...TACTGTAGTTGTCACAGTCTTGTGAACTTTGAATGAAATTCCACTTTGTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CCA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAGTGACCACAAATGTATaGGGTCACCAAAGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKVTTNV*GHQSKV
Trigger: GACCTTACTTTGGTGACCCCATACATTTGTGGTCAC...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGATGTTACCATGTGTATaGCTAAAGCATGTGACCACA +
Preference number: 4 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKMLPCV*LKHVTT
Trigger: TGTGGTCACATGCTTTAGCCATACACATGGTAACAT...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTATGTTACCATGTGTATaGCTAAAGCATGTGACCACA +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGMLPCV*LKHVTT
Trigger: TGTGGTCACATGCTTTAGCCATACACATGGTAACAT...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGATAATCCCCTAAGATaGAGACTCAAGACATCAAAA +
Preference number: 4 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMADNPLR*RLKTSK
Trigger: TTTTGATGTCTTGAGTCTCCATCTTAGGGGATTATC...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR TCA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAGATGGGATGTGTAAATaGGAGTACCTTAAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKDGMCK*EYLKQF
Trigger: GAACTGCTTAAGGTACTCTCATTTACACATCCCATC...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTTCATGTGCCAAAAGGTaGATTGTATATGGAACAACA +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLSCAKR*IVYGTT
Trigger: TGTTGTTCCATATACAATTCACCTTTTGGCACATGA...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAACTTTTCCGACTTCGCTaGCTGCCTTTAGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKLFRLR*LPLGFC
Trigger: ACAGAAACCTAAAGGCAGTCAGCGAAGTCGGAAAAG...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTAGCTGCTTTGATATATaGCAGCCTCTCATAATTACT +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLSCFDI*QPLIIT
Trigger: AGTAATTATGAGAGGCTGTCATATATCAAAGCAGCT...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR GCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGTTTGTCTTTGATCCATaGTATCTGTTTTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKFVFDP*YLFCSI
Trigger: GATGCTGCAAAACAGATAGCATGGATCAAAGACAAA...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATAAAGCAGTTCAAGACCTaGTCTGATGGCTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: QINRSNKQSGTVSLKPQIKQFKT*SDGLIS
Trigger: ACTGATCAAGCCATCAGAGCAGGTCTTGAACTGCTT...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGTCACTAACAGCTGCATaGTGCTTCAGATACTCCCGC +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKSLTAA*CFRYSR
Trigger: GCGGGAGTATCTGAAGCAGCATGCAGCTGTTAGTGA...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp ATACTGAGGTGTAAAGTAATCCAAGAACTTCAGGACTATTTCACAATTTGCATGTCACTAACAGCTGCATaGTGCTTCAGATACTCCCGC +
Preference number: 4 (lower is better)
Translates to: ILRCKVIQELQDYFTICMSLTAA*CFRYSR
Trigger: GCGGGAGTATCTGAAGCAGCATGCAGCTGTTAGTGA...CATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGATTACTTTACACCTCAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTATAATCTGGGTCATGTaGCAAAAGGTGAATTGTATA +
Preference number: 4 (lower is better)
Translates to: PLFSSPILCIKGFIQPQAIIWVM*QKVNCI
Trigger: TATACAATTCACCTTTTGGCACATGACCCAGATTAT...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAACTCCTTGACACTCGGTaGTGTTTGCTTTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKLLDTR*CLLLDF
Trigger: GAAGTCCAAAAGCAAACAGCACCGAGTGTCAAGGAG...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTTTTGCTAAATCAGGATaGTTCATGAGACAATGGCTA +
Preference number: 4 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGFAKSG*FMRQWL
Trigger: TAGCCATTGTCTCATGAACCATCCTGATTTAGCAAA...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGACCAATAGTAACCAATaGTGTTATGAGATGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKTNSNQ*CYEMFQ
Trigger: CTGGAACATCTCATAACACCATTGGTTACTATTGGT...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAATTCCTCAGGGTCATGTaGCCTCACTTTAAGATACTC +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKFLRVM*PHFKIL
Trigger: GAGTATCTTAAAGTGAGGTCACATGACCCTGAGGAA...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp ATACTGAGGTGTAAAGTAATCCAAGAACTTCAGGACTATTTCACAATTTGCATGGTTCAAGACCTGCTCTaGTGGCTTGATCAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: ILRCKVIQELQDYFTICMVQDLL*WLDQLE
Trigger: TTCCAACTGATCAAGCCATCAGAGCAGGTCTTGAAC...CATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGATTACTTTACACCTCAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAATCTTGTCAGGTTGAGTaGAGAAACGAGCTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKSCQVE*RNELVV
Trigger: TACTACCAGCTCGTTTCTTCACTCAACCTGACAAGA...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATTACAGTGAAGATCACTaGAAAAGCCTCCTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHYSEDH*KSLLLH
Trigger: GTGCAACAGGAGGCTTTTTCAGTGATCTTCACTGTA...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR GCA 90 bp TCTGGACAAAGTGGAATTTCATTCAAAGTTCACAAGACTGTGACAACTACAGTACCATCATGGCTTCTTTaGGTACTCTCCATCGTTTGT +
Preference number: 4 (lower is better)
Translates to: SGQSGISFKVHKTVTTTVPSWLL*VLSIVC
Trigger: ACAAACGATGGAGAGTACGCAAAGAAGCCATGATGG...TACTGTAGTTGTCACAGTCTTGTGAACTTTGAATGAAATTCCACTTTGTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR GCA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATCCATGCTATCTGTTTTaGAGCATCTTTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHPCYLF*SIFSSC
Trigger: GCAGCTGGAAAAGATGCTGCAAAACAGATAGCATGG...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAAGCTTGGATTTGAGCTaGTGCTTGCATTGCTTACAG +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKSLDLS*CLHCLQ
Trigger: CTGTAAGCAATGCAAGCAGCAGCTCAAATCCAAGCT...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAAGCAGTCCCATTTTGTaGATCAAAGGCTTTATTCAG +
Preference number: 4 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKSSPIL*IKGFIQ
Trigger: CTGAATAAAGCCTTTGATGCACAAAATGGGACTGCT...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCTGGACAAAGTGGAATTTCATTCAAAGTTCACAAGACTGTGACAACTACAGTAAGGCGGATTGGTACATaGATATCATTAAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGQSGISFKVHKTVTTTVRRIGT*ISLNLP
Trigger: GGGCAGGTTTAATGATATCCATGTACCAATCCGCCT...TACTGTAGTTGTCACAGTCTTGTGAACTTTGAATGAAATTCCACTTTGTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAGATGGCTTGATCAGTTaGAACACCCTCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKDGLIS*NTLIFI
Trigger: GATGAAGATGAGGGTGTTCCAACTGATCAAGCCATC...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTAGATACTTCTTCATCTaGAACCCAAAGTTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: HSSAVPFCASKALFSLKLRYFFI*NPKFSC
Trigger: ACAACTAAACTTTGGGTTCCAGATGAAGAAGTATCT...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAATACTTTGACATAATCTaGGTCATGTGCCAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKYFDII*VMCQKV
Trigger: CACCTTTTGGCACATGACCCAGATTATGTCAAAGTA...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCTGGACAAAGTGGAATTTCATTCAAAGTTCACAAGACTGTGACAACTACAGTACCATTCGTGATGATTTaGTCTGAGATTGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SGQSGISFKVHKTVTTTVPFVMI*SEIACL
Trigger: CAGGCAAGCAATCTCAGACCAAATCATCACGAATGG...TACTGTAGTTGTCACAGTCTTGTGAACTTTGAATGAAATTCCACTTTGTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CCA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGCCTCTCATAATTACTaGTGTCACTATTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKASHNY*CHYCCK
Trigger: TTTACAACAATAGTGACACCAGTAATTATGAGAGGC...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR TCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAATATGGCTCAATAGCTTaGGCTGTCCTCTTCAGTAAA +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKYGSIA*AVLFSK
Trigger: TTTACTGAAGAGGACAGCTCAAGCTATTGAGCCATA...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAATTGAGAAGCCAATTCTaGATCCTTTGCCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKLRSQF*ILCPKH
Trigger: ATGTTTGGGGCAAAGGATTCAGAATTGGCTTCTCAA...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGTTCTTCATGAAATCCTaGGCCTTACCAGGATCAGGT +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKFFMKS*ALPGSG
Trigger: ACCTGATCCTGGTAAGGCTCAGGATTTCATGAAGAA...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAAATGTTTCAGCAGAATaGAATGAGATGGGATGTGTA +
Preference number: 4 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKNVSAE*NEMGCV
Trigger: TACACATCCCATCTCATTTCATTCTGCTGAAACATT...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAGTATGTAGTACTCTTTaGCATGATGATATTCATGGC +
Preference number: 4 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKVCSTL*HDDIHG
Trigger: GCCATGAATATCATCATGTCAAAGAGTACTACATAC...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGGTAACAGGGTTCTTGTaGCAGCTTCACAATAGCACT +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKVTGFL*QLHNST
Trigger: AGTGCTATTGTGAAGCTGGCACAAGAACCCTGTTAC...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAGACTATTTCACAATTTaGATGGTTGTCCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKDYFTI*MVVLLS
Trigger: TGATAGGAGGACAACCATGCAAATTGTGAAATAGTC...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAATTTGCTAAATCAGGATaGTTCATGAGACAATGGCTA +
Preference number: 4 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKFAKSG*FMRQWL
Trigger: TAGCCATTGTCTCATGAACCATCCTGATTTAGCAAA...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGGTCCTTTCTGTGGTGTaGACTGTGTGGATTCAATTG +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKVLSVV*TVWIQL
Trigger: CAATTGAATCCACACAGTCCACACCACAGAAAGGAC...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATATGCATATGGACTTTCTaGTTGTGGCCATTGTTTATA +
Preference number: 4 (lower is better)
Translates to: QINRSNKQSGTVSLKPQICIWTF*LWPLFI
Trigger: TATAAACAATGGCCACAATCAGAAAGTCCATATGCA...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATAGCAAGTCTCAGACGTaGCATATCTGGTTTACTAAT +
Preference number: 4 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHSKSQT*HIWFTN
Trigger: ATTAGTAAACCAGATATGTCACGTCTGAGACTTGCT...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAACAATATCCTGTACTTTaGCATAATCTGGGTCATGTG +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKQYPVL*HNLGHV
Trigger: CACATGACCCAGATTATGTCAAAGTACAGGATATTG...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATAGTATGTAGTACTCTTTaGCATGATGATATTCATGGC +
Preference number: 4 (lower is better)
Translates to: QINRSNKQSGTVSLKPQIVCSTL*HDDIHG
Trigger: GCCATGAATATCATCATGTCAAAGAGTACTACATAC...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGATCTATGTGCACAGGTaGTATCCTCTCCAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKIYVHR*YPLQEK
Trigger: TTTCTCTTGGAGAGGATAGCACCTGTGCACATAGAT...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp ATACTGAGGTGTAAAGTAATCCAAGAACTTCAGGACTATTTCACAATTTGCATGCTTTACAGGATCTTTTaGACAAAGGGCACAGATTGC +
Preference number: 4 (lower is better)
Translates to: ILRCKVIQELQDYFTICMLYRIF*TKGTDC
Trigger: GCAATCTGTGCCCTTTGTGCAAAAGATCCTGTAAAG...CATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGATTACTTTACACCTCAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAATAATCTGGGTCATGTaGCAAAAGGTGAATTGTATA +
Preference number: 4 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKIIWVM*QKVNCI
Trigger: TATACAATTCACCTTTTGGCACATGACCCAGATTAT...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAATTGGATTTGAGCTGCTaGTTGCATTGCTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKLDLSC*LHCLQF
Trigger: AAACTGTAAGCAATGCAAGCAGCAGCTCAAATCCAA...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATAACATTCCAGGCGGATTaGTACATGGATATCATTAAA +
Preference number: 4 (lower is better)
Translates to: QINRSNKQSGTVSLKPQITFQAD*YMDIIK
Trigger: TTTAATGATATCCATGTACCAATCCGCCTGGAATGT...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAGTCCTAGTCTTTGAATaGGCCATGACAGAAATATTT +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKVLVFE*AMTEIF
Trigger: AAATATTTCTGTCATGGCTCATTCAAAGACTAGGAC...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATGTCCTAGTCTTTGAATaGGCCATGACAGAAATATTT +
Preference number: 4 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHVLVFE*AMTEIF
Trigger: AAATATTTCTGTCATGGCTCATTCAAAGACTAGGAC...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAATGCTTCCTGTGTTTTTaGAAATTTGTAGTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKCFLCF*KFVVQL
Trigger: AAGCTGCACTACAAATTTTCAAAAACACAGGAAGCA...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGGACAACTACAGTAGCTaGTATACTTGGATATACCAC +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKDNYSS*YTWIYH
Trigger: GTGGTATATCCAAGTATATCAGCTACTGTAGTTGTC...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR GCA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATAATTAAGTCAAAGACATaGTCTGACAAATCGCTGATA +
Preference number: 4 (lower is better)
Translates to: QINRSNKQSGTVSLKPQIIKSKT*SDKSLI
Trigger: TATCAGCGATTTGTCAGAGCATGTCTTTGACTTAAT...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATGCATCTGTTTTGGGTTaGTTAATCAAGTCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHASVLG*LIKSSK
Trigger: TTTGCTTGACTTGATTAAGCAACCCAAAACAGATGC...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAGCATCTGTTTTGGGTTaGTTAATCAAGTCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKASVLG*LIKSSK
Trigger: TTTGCTTGACTTGATTAAGCAACCCAAAACAGATGC...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGTACTTTGACATAATCTaGGTCATGTGCCAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKYFDII*VMCQKV
Trigger: CACCTTTTGGCACATGACCCAGATTATGTCAAAGTA...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR TCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGTCATGTGCCAAAAGGTaGATTGTATATGGAACAACA +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKSCAKR*IVYGTT
Trigger: TGTTGTTCCATATACAATTCACCTTTTGGCACATGA...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGTTTGTCTTTGATCCATaGTATCTGTTTTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKFVFDP*YLFCSI
Trigger: GATGCTGCAAAACAGATAGCATGGATCAAAGACAAA...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATACACTGACAGATTACTaGTTAAGATCTATCCTAACA +
Preference number: 4 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHTLTDY*LRSILT
Trigger: TGTTAGGATAGATCTTAAGCAGTAATCTGTCAGTGT...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TCTGGACAAAGTGGAATTTCATTCAAAGTTCACAAGACTGTGACAACTACAGTAAAGGTTCTGTATAGCTaGGTGAAAATTTCATTGCTA +
Preference number: 4 (lower is better)
Translates to: SGQSGISFKVHKTVTTTVKVLYS*VKISLL
Trigger: TAGCAATGAAATTTTCACCCAGCTATACAGAACCTT...TACTGTAGTTGTCACAGTCTTGTGAACTTTGAATGAAATTCCACTTTGTCCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGAATTTAAATTCAAGCTaGGGTAAAACAGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKNLNSS*GKTESS
Trigger: GCTGCTCTCTGTTTTACCCCAGCTTGAATTTAAATT...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp ATACTGAGGTGTAAAGTAATCCAAGAACTTCAGGACTATTTCACAATTTGCATGACATTCCAGGCGGATTaGTACATGGATATCATTAAA +
Preference number: 4 (lower is better)
Translates to: ILRCKVIQELQDYFTICMTFQAD*YMDIIK
Trigger: TTTAATGATATCCATGTACCAATCCGCCTGGAATGT...CATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGATTACTTTACACCTCAGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACCAATAGTAACCAATaGTGTTATGAGATGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKTNSNQ*CYEMFQ
Trigger: CTGGAACATCTCATAACACCATTGGTTACTATTGGT...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAAGATACTTCTTCATCTaGAACCCAAAGTTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKRYFFI*NPKFSC
Trigger: ACAACTAAACTTTGGGTTCCAGATGAAGAAGTATCT...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGAGAAGTTTTCATTGTTaGCTCTTCTTTTGGTGTACC +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKRSFHC*LFFWCT
Trigger: GGTACACCAAAAGAAGAGCCAACAATGAAAACTTCT...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGATTAAGTCAAAGACATaGTCTGACAAATCGCTGATA +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKIKSKT*SDKSLI
Trigger: TATCAGCGATTTGTCAGAGCATGTCTTTGACTTAAT...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR GCA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACACTGACAGATTACTaGTTAAGATCTATCCTAACA +
Preference number: 4 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKTLTDY*LRSILT
Trigger: TGTTAGGATAGATCTTAAGCAGTAATCTGTCAGTGT...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTTTCTACCCCTCCGGGTaGCCGACTCGCTACTCCGCT +
Preference number: 5 (lower is better)
Translates to: HSSAVPFCASKALFSLKLFYPSG*PTRYSA
Trigger: AGCGGAGTAGCGAGTCGGCAACCCGGAGGGGTAGAA...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCCAAAGGAGCAGCAAATaGATCAGGTGCAAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCQRSSK*IRCKES
Trigger: GCTCTCCTTGCACCTGATCAATTTGCTGCTCCTTTG...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGTCTGCTGTGCTCTCCTaGACACTCGGTGCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLSAVLS*TLGAVC
Trigger: GCAAACAGCACCGAGTGTCAAGGAGAGCACAGCAGA...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS TCA 90 bp TTCTTTGAGCCTCTTTTCCTCAGGCCACTGCTGTTCATCAGATTCTaGAGCCGTATGGCCTCTTTTCCGACTTCGCTGACTGCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: FFEPLFLRPLLFIRF*SRMASFPTSLTAFR
Trigger: CCTAAAGGCAGTCAGCGAAGTCGGAAAAGAGGCCATACGGCTTCAGAATCTGATGAACAGCAGTGGCCTGAGGAAAAGAGGCTCAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
ENST00000474274.1
CDS-3UTR CAA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGACCTGCTCTGATGGCTaGATCAGTTGGAACACCCTC +
Preference number: 5 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLTCSDG*ISWNTL
Trigger: GAGGGTGTTCCAACTGATCAAGCCATCAGAGCAGGT...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTCTGCTGTGCTCTCCTaGACACTCGGTGCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: PLFSSPILCIKGFIQPQASAVLS*TLGAVC
Trigger: GCAAACAGCACCGAGTGTCAAGGAGAGCACAGCAGA...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCATGGTGATGGCGTTTTaGATGGTCTTCCTCGTCCTT +
Preference number: 5 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCMVMAF*MVFLVL
Trigger: AAGGACGAGGAAGACCATCAAAAACGCCATCACCAT...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATATTCTACCCCTCCGGGTaGCCGACTCGCTACTCCGCT +
Preference number: 5 (lower is better)
Translates to: QINRSNKQSGTVSLKPQIFYPSG*PTRYSA
Trigger: AGCGGAGTAGCGAGTCGGCAACCCGGAGGGGTAGAA...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGTTAGTAGCTGCTTGTTaGGAGCGTCCTACACGGACA +
Preference number: 5 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLLVAAC*ERPTRT
Trigger: TGTCCGTGTAGGACGCTCCAAACAAGCAGCTACTAA...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CAA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCTTATCTGATATTTCCTaGACCCCAGGCGGATATGTA +
Preference number: 5 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCLSDIS*TPGGYV
Trigger: TACATATCCGCCTGGGGTCAAGGAAATATCAGATAA...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGCTCCACCAAGAGGTTTaGGTGGTCGGCCTCTTTTAC +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKLHQEV*VVGLFY
Trigger: GTAAAAGAGGCCGACCACCAAAACCTCTTGGTGGAG...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS TCA 90 bp CCAGGCGGATATGTAATTTTTCCATCATTGGTCCTAGTCTTTGAATaGGCCATGACAGAAATATTTCTACCCCTCCGGGTTGCCGACTCG +
Preference number: 5 (lower is better)
Translates to: PGGYVIFPSLVLVFE*AMTEIFLPLRVADS
Trigger: CGAGTCGGCAACCCGGAGGGGTAGAAATATTTCTGTCATGGCTCATTCAAAGACTAGGACCAATGATGGAAAAATTACATATCCGCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315596.15
ENST00000450460.5
ENST00000466078.1
ENST00000482955.5
ENST00000493653.1
ENST00000498550.5
CDS GCA 90 bp CAAGCCTCCCCTTTATTCTTCCAGGAGAGCTTGGATTTGAGCTGCTaGTTGCATTGCTTACAGTTTCCATTCGTGATGATTTGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: QASPLFFQESLDLSC*LHCLQFPFVMIWSE
Trigger: CTCAGACCAAATCATCACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCTGGAAGAATAAAGGGGAGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS GCA 90 bp GATTCAGGAGATTCTGCTCTCTGCTGTGCTCTCCTTGACACTCGGTaGTGTTTGCTTTTGGACTTCTGTTCCGTATTTCCACTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: DSGDSALCCALLDTR*CLLLDFCSVFPLCL
Trigger: AAGACAAAGTGGAAATACGGAACAGAAGTCCAAAAGCAAACAGCACCGAGTGTCAAGGAGAGCACAGCAGAGAGCAGAATCTCCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000450460.5
ENST00000474274.1
CDS GCA 90 bp CGTGTAGTGGAAAAAGAACAAGCTTTGGAACCAAGCAGGATTGAGTaGGAATCCTGGCTCCCTCTTATTCCTTGTGTGATTCTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: RVVEKEQALEPSRIE*ESWLPLIPCVILWN
Trigger: GTTCCACAGAATCACACAAGGAATAAGAGGGAGCCAGGATTCGCACTCAATCCTGCTTGGTTCCAAAGCTTGTTCTTTTTCCACTACACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGCCCATCATGGCTTCTTaGCGTACTCTCCATCGTTTG +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKPIMAS*RTLHRL
Trigger: CAAACGATGGAGAGTACGCAAAGAAGCCATGATGGG...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCAAGCAAATCCTTTACTaGATGTCGGAGCAGATTTTG +
Preference number: 5 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCKQILY*MSEQIL
Trigger: CAAAATCTGCTCCGACATCAAGTAAAGGATTTGCTT...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGGATTTGTAGGCTGTTaGGGGTTGCCCAACTTCTTA +
Preference number: 5 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAGFVGC*GLPNFL
Trigger: TAAGAAGTTGGGCAACCCCAAACAGCCTACAAATCC...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCACAGCTCCTAGAACATaGGTTGTTTTAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCTAPRT*VVLGFP
Trigger: TGGAAAACCTAAAACAACCAATGTTCTAGGAGCTGT...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS TCA 90 bp CTGCTGCTTGCATTGCTTACAGTTTCCATTCGTGATGATTTGGTCTaGGATTGCTTGCCTGCTGATGAAAGTGGCTTGTTAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: LLLALLTVSIRDDLV*DCLPADESGLLTAP
Trigger: AGGAGCTGTTAACAAGCCACTTTCATCAGCAGGCAAGCAATCTCAGACCAAATCATCACGAATGGAAACTGTAAGCAATGCAAGCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS TCA 90 bp TGTTCATCAGATTCTGAAGCCGTATGGCCTCTTTTCCGACTTCGCTaGCTGCCTTTAGGTTTCTGTTCCTGTACCAACTTAGTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: CSSDSEAVWPLFRLR*LPLGFCSCTNLVKS
Trigger: TGACTTGACTAAGTTGGTACAGGAACAGAAACCTAAAGGCAGTCAGCGAAGTCGGAAAAGAGGCCATACGGCTTCAGAATCTGATGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
ENST00000474274.1
CDS TCA 90 bp ACTACGTGTAGTGGAAAAAGAACAAGCTTTGGAACCAAGCAGGATTaGGTGCGAATCCTGGCTCCCTCTTATTCCTTGTGTGATTCTGTG +
Preference number: 5 (lower is better)
Translates to: TTCSGKRTSFGTKQD*VRILAPSYSLCDSV
Trigger: CACAGAATCACACAAGGAATAAGAGGGAGCCAGGATTCGCACTCAATCCTGCTTGGTTCCAAAGCTTGTTCTTTTTCCACTACACGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS CCA 90 bp AGGAGGATTCCAGGGACACTCAGGAAATCTCACATAGTACTGCAGTaGTGTATGGTACTGGCTAAATATTGGCCTACATGCTACCTACTT +
Preference number: 5 (lower is better)
Translates to: RRIPGTLRKSHIVLQ*CMVLAKYWPTCYLL
Trigger: AAGTAGGTAGCATGTAGGCCAATATTTAGCCAGTACCATACACCACTGCAGTACTATGTGAGATTTCCTGAGTGTCCCTGGAATCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS-3UTR CAA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCATCCATGCTATCTGTTTaGCAGCATCTTTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMASMLSV*QHLFQL
Trigger: CAGCTGGAAAAGATGCTGCAAAACAGATAGCATGGA...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTGTGAGGAACCATGTATaGAGCAAAGATCCGTTCAAC +
Preference number: 5 (lower is better)
Translates to: PLFSSPILCIKGFIQPQAVRNHV*SKDPFN
Trigger: GTTGAACGGATCTTTGCTCAATACATGGTTCCTCAC...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGTAGGCTGTTTGGGGTaGCCCAACTTCTTAGTTATT +
Preference number: 5 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAVGCLG*PNFLVI
Trigger: AATAACTAAGAAGTTGGGCAACCCCAAACAGCCTAC...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGATTTGTAGGCTGTTaGGGGTTGCCCAACTTCTTA +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKGFVGC*GLPNFL
Trigger: TAAGAAGTTGGGCAACCCCAAACAGCCTACAAATCC...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAACCTGCTCTGATGGCTaGATCAGTTGGAACACCCTC +
Preference number: 5 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKTCSDG*ISWNTL
Trigger: GAGGGTGTTCCAACTGATCAAGCCATCAGAGCAGGT...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGATGTTCCAGGTTGCTaGGATCTAGGCTCTTATGCA +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKDVPGC*DLGSYA
Trigger: TGCATAAGAGCCTAGATCCAAGCAACCTGGAACATC...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp GGGGTCACCAAAGTAAGGTCCAACTGTCCACTCTTCAGCAGTCCCATTTTGTGCGTGCCAAAAGGTGAATaGTATATGGAACAACATACT +
Preference number: 5 (lower is better)
Translates to: GVTKVRSNCPLFSSPILCVPKGE*YMEQHT
Trigger: AGTATGTTGTTCCATATACAATTCACCTTTTGGCAC...GCACAAAATGGGACTGCTGAAGAGTGGACAGTTGGACCTTACTTTGGTGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGTTGTTGGCTCTTCTTTaGGTGTACCTCCACCAAGAG +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKLLALL*VYLHQE
Trigger: CTCTTGGTGGAGGTACACCAAAAGAAGAGCCAACAA...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGATGGTGATGGCGTTTTaGATGGTCTTCCTCGTCCTT +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKMVMAF*MVFLVL
Trigger: AAGGACGAGGAAGACCATCAAAAACGCCATCACCAT...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS GCA 90 bp CCTTTATTCTTCCAGGAGAGCTTGGATTTGAGCTGCTGCTTGCATTaGTTACAGTTTCCATTCGTGATGATTTGGTCTGAGATTGCTTGC +
Preference number: 5 (lower is better)
Translates to: PLFFQESLDLSCCLH*LQFPFVMIWSEIAC
Trigger: GCAAGCAATCTCAGACCAAATCATCACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCTGGAAGAATAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS GCA 90 bp TATCAAGCCTCCCCTTTATTCTTCCAGGAGAGCTTGGATTTGAGCTaGTGCTTGCATTGCTTACAGTTTCCATTCGTGATGATTTGGTCT +
Preference number: 5 (lower is better)
Translates to: YQASPLFFQESLDLS*CLHCLQFPFVMIWS
Trigger: AGACCAAATCATCACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCTGGAAGAATAAAGGGGAGGCTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS-3UTR CAA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTTATCTGATATTTCCTaGACCCCAGGCGGATATGTA +
Preference number: 5 (lower is better)
Translates to: PLFSSPILCIKGFIQPQALSDIS*TPGGYV
Trigger: TACATATCCGCCTGGGGTCAAGGAAATATCAGATAA...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTTCCATGCTATCTGTTTaGCAGCATCTTTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: HSSAVPFCASKALFSLKLSMLSV*QHLFQL
Trigger: CAGCTGGAAAAGATGCTGCAAAACAGATAGCATGGA...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTGTGAGGAACCATGTATaGAGCAAAGATCCGTTCAAC +
Preference number: 5 (lower is better)
Translates to: HSSAVPFCASKALFSLKLVRNHV*SKDPFN
Trigger: GTTGAACGGATCTTTGCTCAATACATGGTTCCTCAC...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGCAAATCCTTTACTaGATGTCGGAGCAGATTTTG +
Preference number: 5 (lower is better)
Translates to: SSYQRHPSGVMADNLAPLKQILY*MSEQIL
Trigger: CAAAATCTGCTCCGACATCAAGTAAAGGATTTGCTT...CAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAACACTGGCATCTGTTTaGGGTTGCTTAATCAAGTCA +
Preference number: 5 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMATLASV*GCLIKS
Trigger: TGACTTGATTAAGCAACCCAAAACAGATGCCAGTGT...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGATGAGATGTTCCAGGTaGCTTGGATCTAGGCTCTTA +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKMRCSR*LGSRLL
Trigger: TAAGAGCCTAGATCCAAGCAACCTGGAACATCTCAT...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGCTGATGAAAGTGGCTaGTTAACAGCTCCTAGAACA +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKADESG*LTAPRT
Trigger: TGTTCTAGGAGCTGTTAACAAGCCACTTTCATCAGC...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTTGCTGATGAAAGTGGCTaGTTAACAGCTCCTAGAACA +
Preference number: 5 (lower is better)
Translates to: HSSAVPFCASKALFSLKLADESG*LTAPRT
Trigger: TGTTCTAGGAGCTGTTAACAAGCCACTTTCATCAGC...AAGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTCGGTGCTGTTTGCTTTaGGACTTCTGTTCCGTATTT +
Preference number: 5 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGRCCLL*DFCSVF
Trigger: AAATACGGAACAGAAGTCCAAAAGCAAACAGCACCG...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAATTCCTTAGTAGCTGCTaGTTTGGAGCGTCCTACACG +
Preference number: 5 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKFLSSC*FGASYT
Trigger: CGTGTAGGACGCTCCAAACAAGCAGCTACTAAGGAA...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CAA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTGGACTATTTCACAATTaGCATGGTTGTCCTCCTATC +
Preference number: 5 (lower is better)
Translates to: PLFSSPILCIKGFIQPQAGLFHN*HGCPPI
Trigger: GATAGGAGGACAACCATGCAAATTGTGAAATAGTCC...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS CCA 90 bp AAATCTCACATAGTACTGCAGTGGTGTATGGTACTGGCTAAATATTaGCCTACATGCTACCTACTTTTTAATCCACACTCCCACCCCTTG +
Preference number: 5 (lower is better)
Translates to: KSHIVLQWCMVLAKY*PTCYLLFNPHSHPL
Trigger: CAAGGGGTGGGAGTGTGGATTAAAAAGTAGGTAGCATGTAGGCCAATATTTAGCCAGTACCATACACCACTGCAGTACTATGTGAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS-3UTR CAA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAATGGTAACAGGGTTCTaGTGCCAGCTTCACAATAGC +
Preference number: 5 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKMVTGF*CQLHNS
Trigger: GCTATTGTGAAGCTGGCACAAGAACCCTGTTACCAT...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAATTTTTCACCAAACATaGCCTAGCATGAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAIFHQT*PSMSSS
Trigger: AGAAGAGCTCATGCTAGGCAATGTTTGGTGAAAAAT...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTATTTTTCACCAAACATaGCCTAGCATGAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PLFSSPILCIKGFIQPQAIFHQT*PSMSSS
Trigger: AGAAGAGCTCATGCTAGGCAATGTTTGGTGAAAAAT...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATCTCCACCAAGAGGTTTaGGTGGTCGGCCTCTTTTAC +
Preference number: 5 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHLHQEV*VVGLFY
Trigger: GTAAAAGAGGCCGACCACCAAAACCTCTTGGTGGAG...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS CCA 90 bp GAAAAAGAACAAGCTTTGGAACCAAGCAGGATTGAGTGCGAATCCTaGCTCCCTCTTATTCCTTGTGTGATTCTGTGGAACTTAACATTT +
Preference number: 5 (lower is better)
Translates to: EKEQALEPSRIECES*LPLIPCVILWNLTF
Trigger: AAATGTTAAGTTCCACAGAATCACACAAGGAATAAGAGGGAGCCAGGATTCGCACTCAATCCTGCTTGGTTCCAAAGCTTGTTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS-3UTR CAA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCACATATGTTATATGACTaGACCCAAGCAATGTTCTCA +
Preference number: 5 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAHMLYD*TQAMFS
Trigger: TGAGAACATTGCTTGGGTCAAGTCATATAACATATG...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGTCTTCAGTAAAGCCTTaGCCAAATCATATGCTTGCT +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKSSVKP*PNHMLA
Trigger: AGCAAGCATATGATTTGGCAAAGGCTTTACTGAAGA...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTACTCTGTTAAGTCTTTaGCTAAATCAGGATGGTTCA +
Preference number: 5 (lower is better)
Translates to: PLFSSPILCIKGFIQPQATLLSL*LNQDGS
Trigger: TGAACCATCCTGATTTAGCAAAAGACTTAACAGAGT...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATCCCATCATGGCTTCTTaGCGTACTCTCCATCGTTTG +
Preference number: 5 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHPIMAS*RTLHRL
Trigger: CAAACGATGGAGAGTACGCAAAGAAGCCATGATGGG...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCACAATTTGCATGGTTGTCCTCCTATCAGAGGCATCCTTCTGGTGTAATGGCAATATTTCTTATAAATTaGGGCAAGTCCCATCATGGC +
Preference number: 5 (lower is better)
Translates to: SQFAWLSSYQRHPSGVMAIFLIN*GKSHHG
Trigger: GCCATGATGGGACTTGCCCAAATTTATAAGAAATAT...TGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAGTAGGCTGTTTGGGGTaGCCCAACTTCTTAGTTATT +
Preference number: 5 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKVGCLG*PNFLVI
Trigger: AATAACTAAGAAGTTGGGCAACCCCAAACAGCCTAC...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAATGAGATGTTCCAGGTaGCTTGGATCTAGGCTCTTA +
Preference number: 5 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKMRCSR*LGSRLL
Trigger: TAAGAGCCTAGATCCAAGCAACCTGGAACATCTCAT...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CCACTCTTCAGCAGTCCCATTTTGTGCATCAAAGGCTTTATTCAGCCTCAAGCTGTGCCAAAAGGTGAATaGTATATGGAACAACATACT +
Preference number: 5 (lower is better)
Translates to: PLFSSPILCIKGFIQPQAVPKGE*YMEQHT
Trigger: AGTATGTTGTTCCATATACAATTCACCTTTTGGCAC...AGCTTGAGGCTGAATAAAGCCTTTGATGCACAAAATGGGACTGCTGAAGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTGTTTTTCATTCATTTTaGCATCATCTGGTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGVFHSF*HHLVLG
Trigger: CCCAAGGACCAGATGATGCAAAAATGAATGAAAAAC...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAAGATTTGAGCTGCTGCTaGCATTGCTTACAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKDLSCC*HCLQFP
Trigger: TGGAAACTGTAAGCAATGCAAGCAGCAGCTCAAATC...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp ATACTGAGGTGTAAAGTAATCCAAGAACTTCAGGACTATTTCACAATTTGCATGCAGGAGAGCTTGGATTaGAGCTGCTGCTTGCATTGC +
Preference number: 5 (lower is better)
Translates to: ILRCKVIQELQDYFTICMQESLD*SCCLHC
Trigger: GCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCTG...CATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGATTACTTTACACCTCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGCAGGAGAGCTTGGATTaGAGCTGCTGCTTGCATTGC +
Preference number: 5 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKQESLD*SCCLHC
Trigger: GCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCTG...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGTCTAATATATCTTCTTaGAGCCTCTTTTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKSNISS*SLFSSG
Trigger: GCCTGAGGAAAAGAGGCTCAAAGAAGATATATTAGA...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGCTCTTTTACCCTTTTTaGGCGGACTATTCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKLFYPF*ADYSVH
Trigger: ATGAACAGAATAGTCCGCCAAAAAAGGGTAAAAGAG...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAACGGTGCTGTTTGCTTTaGGACTTCTGTTCCGTATTT +
Preference number: 5 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKRCCLL*DFCSVF
Trigger: AAATACGGAACAGAAGTCCAAAAGCAAACAGCACCG...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAGACACTCGGTGCTGTTaGCTTTTGGACTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKDTRCC*LLDFCS
Trigger: GGAACAGAAGTCCAAAAGCAAACAGCACCGAGTGTC...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATGACACTCGGTGCTGTTaGCTTTTGGACTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHDTRCC*LLDFCS
Trigger: GGAACAGAAGTCCAAAAGCAAACAGCACCGAGTGTC...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAGAGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGTTCAGCAGTCCCATTTaGTGCATCAAAGGCTTTATT +
Preference number: 5 (lower is better)
Translates to: QRHPSGVMADNLAPLKIKFSSPI*CIKGFI
Trigger: AATAAAGCCTTTGATGCACAAAATGGGACTGCTGAA...CTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS GCA 90 bp ATAGTACTGCAGTGGTGTATGGTACTGGCTAAATATTGGCCTACATaGTACCTACTTTTTAATCCACACTCCCACCCCTTGCAAATAAAA +
Preference number: 5 (lower is better)
Translates to: IVLQWCMVLAKYWPT*YLLFNPHSHPLQIK
Trigger: TTTTATTTGCAAGGGGTGGGAGTGTGGATTAAAAAGTAGGTAGCATGTAGGCCAATATTTAGCCAGTACCATACACCACTGCAGTACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS-3UTR CAA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATACGTACTCTCCATCGTTaGTCTAATGTTCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QINRSNKQSGTVSLKPQIRTLHR*SNVLSL
Trigger: GAGAGAGAGAACATTAGACAAACGATGGAGAGTACG...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGCAAAGGAGCAGCAAATaGATCAGGTGCAAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKQRSSK*IRCKES
Trigger: GCTCTCCTTGCACCTGATCAATTTGCTGCTCCTTTG...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAATGGTAACAGGGTTCTaGTGCCAGCTTCACAATAGC +
Preference number: 5 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKMVTGF*CQLHNS
Trigger: GCTATTGTGAAGCTGGCACAAGAACCCTGTTACCAT...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp AGGCATCCTTCTGGTGTAATGGCAGACAATTTAGCACCTCTGAAGATTAAGGGTGCAAAGGTGAAGACATaGTGTAATCTTCATTTTCAC +
Preference number: 5 (lower is better)
Translates to: RHPSGVMADNLAPLKIKGAKVKT*CNLHFH
Trigger: GTGAAAATGAAGATTACACAATGTCTTCACCTTTGC...ACCCTTAATCTTCAGAGGTGCTAAATTGTCTGCCATTACACCAGAAGGATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCTGGACAAAGTGGAATTTCATTCAAAGTTCACAAGACTGTGACAACTACAGTATTGTTGGCTCTTCTTTaGGTGTACCTCCACCAAGAG +
Preference number: 5 (lower is better)
Translates to: SGQSGISFKVHKTVTTTVLLALL*VYLHQE
Trigger: CTCTTGGTGGAGGTACACCAAAAGAAGAGCCAACAA...TACTGTAGTTGTCACAGTCTTGTGAACTTTGAATGAAATTCCACTTTGTCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CAA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAACGTACTCTCCATCGTTaGTCTAATGTTCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKRTLHR*SNVLSL
Trigger: GAGAGAGAGAACATTAGACAAACGATGGAGAGTACG...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATAGGCATCTGTTTTGGGTaGCTTAATCAAGTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: QINRSNKQSGTVSLKPQIGICFG*LNQVKQ
Trigger: TTGCTTGACTTGATTAAGCAACCCAAAACAGATGCC...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCGGGTACTGTCAGTTTAAAGCCGCAGATAAAAGCTATACAAGCACTTCAGAAATTTCTGGGCAAACACTaGTCTTACTTGATAGCATTC +
Preference number: 5 (lower is better)
Translates to: SGTVSLKPQIKAIQALQKFLGKH*SYLIAF
Trigger: GAATGCTATCAAGTAAGACAAGTGTTTGCCCAGAAA...TTTCTGAAGTGCTTGTATAGCTTTTATCTGCGGCTTTAAACTGACAGTACCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp ATACTGAGGTGTAAAGTAATCCAAGAACTTCAGGACTATTTCACAATTTGCATGGAGCTGCTGCTTGCATaGCTTACAGTTTCCATTCGT +
Preference number: 5 (lower is better)
Translates to: ILRCKVIQELQDYFTICMELLLA*LTVSIR
Trigger: ACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCTC...CATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGATTACTTTACACCTCAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGGAGCTGCTGCTTGCATaGCTTACAGTTTCCATTCGT +
Preference number: 5 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKELLLA*LTVSIR
Trigger: ACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCTC...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCTGGACAAAGTGGAATTTCATTCAAAGTTCACAAGACTGTGACAACTACAGTAGATTTGAGCTGCTGCTaGCATTGCTTACAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: SGQSGISFKVHKTVTTTVDLSCC*HCLQFP
Trigger: TGGAAACTGTAAGCAATGCAAGCAGCAGCTCAAATC...TACTGTAGTTGTCACAGTCTTGTGAACTTTGAATGAAATTCCACTTTGTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CAA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAATCACAATTTGCATGGTaGTCCTCCTATCAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKSQFAW*SSYQRH
Trigger: ATGCCTCTGATAGGAGGACAACCATGCAAATTGTGA...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCTGGACAAAGTGGAATTTCATTCAAAGTTCACAAGACTGTGACAACTACAGTACAAAACCAATGTATGTaGATCCCACCTGAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SGQSGISFKVHKTVTTTVQNQCM*IPPELL
Trigger: AAGCAGCTCAGGTGGGATCAACATACATTGGTTTTG...TACTGTAGTTGTCACAGTCTTGTGAACTTTGAATGAAATTCCACTTTGTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CAA 90 bp TCTGGACAAAGTGGAATTTCATTCAAAGTTCACAAGACTGTGACAACTACAGTACCAATTCTGAATCCTTaGCCCCAAACATTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: SGQSGISFKVHKTVTTTVPILNP*PQTFLP
Trigger: TGGCAAAAATGTTTGGGGCAAAGGATTCAGAATTGG...TACTGTAGTTGTCACAGTCTTGTGAACTTTGAATGAAATTCCACTTTGTCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS-3UTR CAA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAGGCATCTGTTTTGGGTaGCTTAATCAAGTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKGICFG*LNQVKQ
Trigger: TTGCTTGACTTGATTAAGCAACCCAAAACAGATGCC...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAGGACTATTTCACAATTaGCATGGTTGTCCTCCTATC +
Preference number: 5 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKGLFHN*HGCPPI
Trigger: GATAGGAGGACAACCATGCAAATTGTGAAATAGTCC...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS GCA 90 bp AACCTTGGAACACCTTCATACTCATTACTTACCTATTACCTTACATaGTGTTATCTGATAGGACCCACCTGCAGTCAAAATTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: NLGTPSYSLLTYYLT*CYLIGPTCSQNFSQ
Trigger: TTGTGAAAAATTTTGACTGCAGGTGGGTCCTATCAGATAACAGCATGTAAGGTAATAGGTAAGTAATGAGTATGAAGGTGTTCCAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS-3UTR CAA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGCCAATTCTGAATCCTTaGCCCCAAACATTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKPILNP*PQTFLP
Trigger: TGGCAAAAATGTTTGGGGCAAAGGATTCAGAATTGG...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp ATACTGAGGTGTAAAGTAATCCAAGAACTTCAGGACTATTTCACAATTTGCATGACACTGGCATCTGTTTaGGGTTGCTTAATCAAGTCA +
Preference number: 5 (lower is better)
Translates to: ILRCKVIQELQDYFTICMTLASV*GCLIKS
Trigger: TGACTTGATTAAGCAACCCAAAACAGATGCCAGTGT...CATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGATTACTTTACACCTCAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAAGTTTTTCATTCATTTTaGCATCATCTGGTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKVFHSF*HHLVLG
Trigger: CCCAAGGACCAGATGATGCAAAAATGAATGAAAAAC...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATACAGCTCCTAGAACATaGGTTGTTTTAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHTAPRT*VVLGFP
Trigger: TGGAAAACCTAAAACAACCAATGTTCTAGGAGCTGT...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CAAATCAATAGATCCAATAAACAGTCGGGTACTGTCAGTTTAAAGCCGCAGATAGCAAAGGTGAAGACATaGTGTAATCTTCATTTTCAC +
Preference number: 5 (lower is better)
Translates to: QINRSNKQSGTVSLKPQIAKVKT*CNLHFH
Trigger: GTGAAAATGAAGATTACACAATGTCTTCACCTTTGC...TATCTGCGGCTTTAAACTGACAGTACCCGACTGTTTATTGGATCTATTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp CACATTACACTTTCACAAGACTCCATAGTCAATGTTACCATGTGTATGGCTAAATCTAATATATCTTCTTaGAGCCTCTTTTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: HITLSQDSIVNVTMCMAKSNISS*SLFSSG
Trigger: GCCTGAGGAAAAGAGGCTCAAAGAAGATATATTAGA...TTTAGCCATACACATGGTAACATTGACTATGGAGTCTTGTGAAAGTGTAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGACTCCATCTCTTTTACCCTTTTTaGGCGGACTATTCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: FLLYVYIAIAHYTFTRLHLFYPF*ADYSVH
Trigger: ATGAACAGAATAGTCCGCCAAAAAAGGGTAAAAGAG...ATGGAGTCTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS-3UTR CAA 90 bp TCTGGACAAAGTGGAATTTCATTCAAAGTTCACAAGACTGTGACAACTACAGTATTCAGCAGTCCCATTTaGTGCATCAAAGGCTTTATT +
Preference number: 5 (lower is better)
Translates to: SGQSGISFKVHKTVTTTVFSSPI*CIKGFI
Trigger: AATAAAGCCTTTGATGCACAAAATGGGACTGCTGAA...TACTGTAGTTGTCACAGTCTTGTGAACTTTGAATGAAATTCCACTTTGTCCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315596.15
CDS CCA 90 bp CATTCCACCAACAATAACCACAAAGTTTGTTCAAGGTCCAGAAAATaGGAATTCCTCACTACTGTCTACAACTCAAATGCTGTTATAAAA +
Preference number: 5 (lower is better)
Translates to: HSTNNNHKVCSRSRK*EFLTTVYNSNAVIK
Trigger: TTTTATAACAGCATTTGAGTTGTAGACAGTAGTGAGGAATTCCCATTTTCTGGACCTTGAACAAACTTTGTGGTTATTGTTGGTGGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466078.1
CDS-3UTR CAA 90 bp ATACTGAGGTGTAAAGTAATCCAAGAACTTCAGGACTATTTCACAATTTGCATGTCTTCAGTAAAGCCTTaGCCAAATCATATGCTTGCT +
Preference number: 5 (lower is better)
Translates to: ILRCKVIQELQDYFTICMSSVKP*PNHMLA
Trigger: AGCAAGCATATGATTTGGCAAAGGCTTTACTGAAGA...CATGCAAATTGTGAAATAGTCCTGAAGTTCTTGGATTACTTTACACCTCAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS TCA 90 bp CTTGATTCATTACTACATGTCAGAAGCAGAGGAAGAAGCTTAAAGTaGAGCCCTTTGACCTACTTTGAAAATAACTTACAAGAAAGTAGT +
Preference number: 5 (lower is better)
Translates to: LDSLLHVRSRGRSLK*SPLTYFENNLQESS
Trigger: ACTACTTTCTTGTAAGTTATTTTCAAAGTAGGTCAAAGGGCTTCACTTTAAGCTTCTTCCTCTGCTTCTGACATGTAGTAATGAATCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466078.1
CDS-3UTR CAA 90 bp TTACAAGTTTCTTCTTTATGTCTACATAGCCATCGCACATTACACTTTCACAAGATATTTCTTATAAATTaGGGCAAGTCCCATCATGGC +
Preference number: 5 (lower is better)
Translates to: LQVSSLCLHSHRTLHFHKIFLIN*GKSHHG
Trigger: GCCATGATGGGACTTGCCCAAATTTATAAGAAATAT...CTTGTGAAAGTGTAATGTGCGATGGCTATGTAGACATAAAGAAGAAACTTGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS TCA 72 bp CCTCTTTTCCTCAGGCCACTGCTGTTCATCAGATTCTaGAGCCGTATGGCCTCTTTTCCGACTTCGCTGACT +
Preference number: 6 (lower is better)
Translates to: PLFLRPLLFIRF*SRMASFPTSLT
Trigger: AGTCAGCGAAGTCGGAAAAGAGGCCATACGGCTTCAGAATCTGATGAACAGCAGTGGCCTGAGGAAAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
ENST00000474274.1
CDS GCA 72 bp CTTATGTCAAACTATAACACGGTGCTGCTCAGGCTATaGAGCACAAAATCTGCAGCCTACTGCTCTCCACCG +
Preference number: 6 (lower is better)
Translates to: LMSNYNTVLLRL*STKSAAYCSPP
Trigger: CGGTGGAGAGCAGTAGGCTGCAGATTTTGTGCTGCATAGCCTGAGCAGCACCGTGTTATAGTTTGACATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS TCA 72 bp CAGGGGATGTGTAAGGAGCTTCAGGAGCATAAATCCTaGAAATATCAGCAAGGCAGCAGGCTACCAGTAAGC +
Preference number: 6 (lower is better)
Translates to: QGMCKELQEHKS*KYQQGSRLPVS
Trigger: GCTTACTGGTAGCCTGCTGCCTTGCTGATATTTTCAGGATTTATGCTCCTGAAGCTCCTTACACATCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315596.15
ENST00000450460.5
ENST00000482955.5
ENST00000493653.1
ENST00000498550.5
CDS GCA 72 bp GATTCTGCTCTCTGCTGTGCTCTCCTTGACACTCGGTaGTGTTTGCTTTTGGACTTCTGTTCCGTATTTCCA +
Preference number: 6 (lower is better)
Translates to: DSALCCALLDTR*CLLLDFCSVFP
Trigger: TGGAAATACGGAACAGAAGTCCAAAAGCAAACAGCACCGAGTGTCAAGGAGAGCACAGCAGAGAGCAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000450460.5
ENST00000474274.1
CDS GCA 72 bp TCGTCCTTTCTGTGGTGTGGACTGTGTGGATTCAATTaGACTAGATTCAGGAGATTCTGCTCTCTGCTGTGC +
Preference number: 6 (lower is better)
Translates to: SSFLWCGLCGFN*TRFRRFCSLLC
Trigger: GCACAGCAGAGAGCAGAATCTCCTGAATCTAGTGCAATTGAATCCACACAGTCCACACCACAGAAAGGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000450460.5
ENST00000474274.1
CDS CAA 90 bp GGAGATTCTGCTCTCTGCTGTGCTCTCCTTGACACTCGGTGCTGTTaGCTTTTGGACTTCTGTTCCGTATTTCCACTTTGTCTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: GDSALCCALLDTRCC*LLDFCSVFPLCLSS
Trigger: AGAAGAAAGACAAAGTGGAAATACGGAACAGAAGTCCAAAAGCAAACAGCACCGAGTGTCAAGGAGAGCACAGCAGAGAGCAGAATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000450460.5
ENST00000474274.1
CDS TCA 72 bp GATTCTGAAGCCGTATGGCCTCTTTTCCGACTTCGCTaGCTGCCTTTAGGTTTCTGTTCCTGTACCAACTTA +
Preference number: 6 (lower is better)
Translates to: DSEAVWPLFRLR*LPLGFCSCTNL
Trigger: TAAGTTGGTACAGGAACAGAAACCTAAAGGCAGTCAGCGAAGTCGGAAAAGAGGCCATACGGCTTCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
ENST00000474274.1
CDS CCA 72 bp CCAGGGACACTCAGGAAATCTCACATAGTACTGCAGTaGTGTATGGTACTGGCTAAATATTGGCCTACATGC +
Preference number: 6 (lower is better)
Translates to: PGTLRKSHIVLQ*CMVLAKYWPTC
Trigger: GCATGTAGGCCAATATTTAGCCAGTACCATACACCACTGCAGTACTATGTGAGATTTCCTGAGTGTCCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS CAA 90 bp GCCTCCCCTTTATTCTTCCAGGAGAGCTTGGATTTGAGCTGCTGCTaGCATTGCTTACAGTTTCCATTCGTGATGATTTGGTCTGAGATT +
Preference number: 6 (lower is better)
Translates to: ASPLFFQESLDLSCC*HCLQFPFVMIWSEI
Trigger: AATCTCAGACCAAATCATCACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCTGGAAGAATAAAGGGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS CAA 90 bp CCATTTCAGAACTATCAAGCCTCCCCTTTATTCTTCCAGGAGAGCTaGGATTTGAGCTGCTGCTTGCATTGCTTACAGTTTCCATTCGTG +
Preference number: 6 (lower is better)
Translates to: PFQNYQASPLFFQES*DLSCCLHCLQFPFV
Trigger: CACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCTGGAAGAATAAAGGGGAGGCTTGATAGTTCTGAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS GCA 72 bp TTCCAGGAGAGCTTGGATTTGAGCTGCTGCTTGCATTaGTTACAGTTTCCATTCGTGATGATTTGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: FQESLDLSCCLH*LQFPFVMIWSE
Trigger: CTCAGACCAAATCATCACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS GCA 72 bp TCCCCTTTATTCTTCCAGGAGAGCTTGGATTTGAGCTaGTGCTTGCATTGCTTACAGTTTCCATTCGTGATG +
Preference number: 6 (lower is better)
Translates to: SPLFFQESLDLS*CLHCLQFPFVM
Trigger: CATCACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCTGGAAGAATAAAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS GCA 72 bp CAGTGGTGTATGGTACTGGCTAAATATTGGCCTACATaGTACCTACTTTTTAATCCACACTCCCACCCCTTG +
Preference number: 6 (lower is better)
Translates to: QWCMVLAKYWPT*YLLFNPHSHPL
Trigger: CAAGGGGTGGGAGTGTGGATTAAAAAGTAGGTAGCATGTAGGCCAATATTTAGCCAGTACCATACACCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS CAA 72 bp TGCTGTGCTCTCCTTGACACTCGGTGCTGTTTGCTTTaGGACTTCTGTTCCGTATTTCCACTTTGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: CCALLDTRCCLL*DFCSVFPLCLS
Trigger: AGAAAGACAAAGTGGAAATACGGAACAGAAGTCCAAAAGCAAACAGCACCGAGTGTCAAGGAGAGCACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000450460.5
ENST00000474274.1
CDS GCA 72 bp AATATATCTTCTTTGAGCCTCTTTTCCTCAGGCCACTaGTGTTCATCAGATTCTGAAGCCGTATGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: NISSLSLFSSGH*CSSDSEAVWPL
Trigger: AAGAGGCCATACGGCTTCAGAATCTGATGAACAGCAGTGGCCTGAGGAAAAGAGGCTCAAAGAAGATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
ENST00000474274.1
CDS CCA 72 bp TGCTTGCATTGCTTACAGTTTCCATTCGTGATGATTTaGTCTGAGATTGCTTGCCTGCTGATGAAAGTGGCT +
Preference number: 6 (lower is better)
Translates to: CLHCLQFPFVMI*SEIACLLMKVA
Trigger: AGCCACTTTCATCAGCAGGCAAGCAATCTCAGACCAAATCATCACGAATGGAAACTGTAAGCAATGCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS GCA 72 bp AACTTCTTAGTTATTTCACGCACACAACCTTCAGCCTaGTTGCAGGAGCATGTTGGACTAACAAGTACTTCT +
Preference number: 6 (lower is better)
Translates to: NFLVISRTQPSA*LQEHVGLTSTS
Trigger: AGAAGTACTTGTTAGTCCAACATGCTCCTGCAAGCAGGCTGAAGGTTGTGTGCGTGAAATAACTAAGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS GCA 72 bp CCTTTATTCTTCCAGGAGAGCTTGGATTTGAGCTGCTaGTTGCATTGCTTACAGTTTCCATTCGTGATGATT +
Preference number: 6 (lower is better)
Translates to: PLFFQESLDLSC*LHCLQFPFVMI
Trigger: AATCATCACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCTGGAAGAATAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS CAA 72 bp ATCATTTCCAGGAAAGGATTTGTAGGCTGTTTGGGGTaGCCCAACTTCTTAGTTATTTCACGCACACAACCT +
Preference number: 6 (lower is better)
Translates to: IISRKGFVGCLG*PNFLVISRTQP
Trigger: AGGTTGTGTGCGTGAAATAACTAAGAAGTTGGGCAACCCCAAACAGCCTACAAATCCTTTCCTGGAAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS CAA 72 bp CCAATAGTAACCAATGGTGTTATGAGATGTTCCAGGTaGCTTGGATCTAGGCTCTTATGCAGAGGCTCAAAT +
Preference number: 6 (lower is better)
Translates to: PIVTNGVMRCSR*LGSRLLCRGSN
Trigger: ATTTGAGCCTCTGCATAAGAGCCTAGATCCAAGCAACCTGGAACATCTCATAACACCATTGGTTACTATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS CAA 72 bp TTATTCTTCCAGGAGAGCTTGGATTTGAGCTGCTGCTaGCATTGCTTACAGTTTCCATTCGTGATGATTTGG +
Preference number: 6 (lower is better)
Translates to: LFFQESLDLSCC*HCLQFPFVMIW
Trigger: CCAAATCATCACGAATGGAAACTGTAAGCAATGCAAGCAGCAGCTCAAATCCAAGCTCTCCTGGAAGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS CAA 72 bp TGTATTTTACTACGTGTAGTGGAAAAAGAACAAGCTTaGGAACCAAGCAGGATTGAGTGCGAATCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: CILLRVVEKEQA*EPSRIECESWL
Trigger: GAGCCAGGATTCGCACTCAATCCTGCTTGGTTCCAAAGCTTGTTCTTTTTCCACTACACGTAGTAAAATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS GCA 72 bp TCTTATAAATTTGGGCAAGTCCCATCATGGCTTCTTTaGGTACTCTCCATCGTTTGTCTAATGTTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: SYKFGQVPSWLL*VLSIVCLMFSL
Trigger: GAGAGAGAACATTAGACAAACGATGGAGAGTACGCAAAGAAGCCATGATGGGACTTGCCCAAATTTATAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000450460.5
ENST00000498550.5
CDS CCA 72 bp ATAGTACTGCAGTGGTGTATGGTACTGGCTAAATATTaGCCTACATGCTACCTACTTTTTAATCCACACTCC +
Preference number: 6 (lower is better)
Translates to: IVLQWCMVLAKY*PTCYLLFNPHS
Trigger: GGAGTGTGGATTAAAAAGTAGGTAGCATGTAGGCCAATATTTAGCCAGTACCATACACCACTGCAGTACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS TCA 72 bp GGTACCAGATTTACTAAAACCGTATCCAAAAGCTCCTaGGACACTGTATCACCTTCACAAATAATAGAGCTC +
Preference number: 6 (lower is better)
Translates to: GTRFTKTVSKSS*DTVSPSQIIEL
Trigger: GAGCTCTATTATTTGTGAAGGTGATACAGTGTCTCAGGAGCTTTTGGATACGGTTTTAGTAAATCTGGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000450460.5
ENST00000498550.5
CDS TCA 72 bp CAAGAAACAAGGGTAGAGGTTACCTCTGGGAGAAGATaGATGGGAGAAAAGTTTACAAGTTGGGTAATAGAT +
Preference number: 6 (lower is better)
Translates to: QETRVEVTSGRR*MGEKFTSWVID
Trigger: ATCTATTACCCAACTTGTAAACTTTTCTCCCATTCATCTTCTCCCAGAGGTAACCTCTACCCTTGTTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS CCA 72 bp AGGCTCTTATGCAGAGGCTCAAATATCTGTGCAAACTaGGTCTCTTTACTAGAAAATATCGCATGGATACAA +
Preference number: 6 (lower is better)
Translates to: RLLCRGSNICAN*VSLLENIAWIQ
Trigger: TTGTATCCATGCGATATTTTCTAGTAAAGAGACCCAGTTTGCACAGATATTTGAGCCTCTGCATAAGAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS CAA 72 bp ATCATTTCCAGGAAAGGATTTGTAGGCTGTTTGGGGTaGCCCAACTTCTTAGTTATTTCACGCTGTAATACA +
Preference number: 6 (lower is better)
Translates to: IISRKGFVGCLG*PNFLVISRCNT
Trigger: TGTATTACAGCGTGAAATAACTAAGAAGTTGGGCAACCCCAAACAGCCTACAAATCCTTTCCTGGAAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481616.1
CDS CAA 90 bp GGCATCTGTTTTGGGTTGCTTAATCAAGTCAAGCAAATCCTTTACTaGATGTCGGAGCAGATTTTGACATTTCCACATTTCATTCAATGC +
Preference number: 6 (lower is better)
Translates to: GICFGLLNQVKQILY*MSEQILTFPHFIQC
Trigger: GCATTGAATGAAATGTGGAAATGTCAAAATCTGCTCCGACATCAAGTAAAGGATTTGCTTGACTTGATTAAGCAACCCAAAACAGATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS CAA 90 bp TTTCACAATGAAAGTAGCTACCAAAGATTTCAAAGGAGCAGCAAATaGATCAGGTGCAAGGAGAGCAATATGACCAATAGTAACCAATGG +
Preference number: 6 (lower is better)
Translates to: FHNESSYQRFQRSSK*IRCKESNMTNSNQW
Trigger: CCATTGGTTACTATTGGTCATATTGCTCTCCTTGCACCTGATCAATTTGCTGCTCCTTTGAAATCTTTGGTAGCTACTTTCATTGTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS GCA 72 bp ACACCTTCATACTCATTACTTACCTATTACCTTACATaGTGTTATCTGATAGGACCCACCTGCAGTCAAAAT +
Preference number: 6 (lower is better)
Translates to: TPSYSLLTYYLT*CYLIGPTCSQN
Trigger: ATTTTGACTGCAGGTGGGTCCTATCAGATAACAGCATGTAAGGTAATAGGTAAGTAATGAGTATGAAGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS CCA 72 bp AAGATGTCTGCCCTCACTAACATGACAAAAGAACCTTaGAACACCTTCATACTCATTACTTACCTATTACCT +
Preference number: 6 (lower is better)
Translates to: KMSALTNMTKEP*NTFILITYLLP
Trigger: AGGTAATAGGTAAGTAATGAGTATGAAGGTGTTCCAAGGTTCTTTTGTCATGTTAGTGAGGGCAGACATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS CCA 72 bp TTAAAGGAAACAAGAAACAAGGGTAGAGGTTACCTCTaGGAGAAGATGAATGGGAGAAAAGTTTACAAGTTG +
Preference number: 6 (lower is better)
Translates to: LKETRNKGRGYL*EKMNGRKVYKL
Trigger: CAACTTGTAAACTTTTCTCCCATTCATCTTCTCCCAGAGGTAACCTCTACCCTTGTTTCTTGTTTCCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498550.5
CDS TCA 72 bp GTCTTTAGGAGATTCCAAACTGTATGTAGTACTCTTTaGCATGATGATATTCATGGCAACATCACACACAGT +
Preference number: 6 (lower is better)
Translates to: VFRRFQTVCSTL*HDDIHGNITHS
Trigger: ACTGTGTGTGATGTTGCCATGAATATCATCATGTCAAAGAGTACTACATACAGTTTGGAATCTCCTAAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315596.15
ENST00000447833.1
ENST00000450460.5
CDS GCA 72 bp GGTAGAAGAGACAATAATTTTTCACTAACAGCTGCATaGTGCTTCAGATACTCCCGCCTTACATTTATATTT +
Preference number: 6 (lower is better)
Translates to: GRRDNNFSLTAA*CFRYSRLTFIF
Trigger: AAATATAAATGTAAGGCGGGAGTATCTGAAGCAGCATGCAGCTGTTAGTGAAAAATTATTGTCTCTTCTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS CAA 72 bp TTTGGGTTGCTTAATCAAGTCAAGCAAATCCTTTACTaGATGTCGGAGCAGATTTTGACATTTCCACATTTC +
Preference number: 6 (lower is better)
Translates to: FGLLNQVKQILY*MSEQILTFPHF
Trigger: GAAATGTGGAAATGTCAAAATCTGCTCCGACATCAAGTAAAGGATTTGCTTGACTTGATTAAGCAACCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS CAA 72 bp AGTATCGGTCAATCTTGGAGTTATTTAAATCAGTACTaGCCTTTAGTTTATCAGGGGATGTGTAAGGAGCTT +
Preference number: 6 (lower is better)
Translates to: SIGQSWSYLNQY*PLVYQGMCKEL
Trigger: AAGCTCCTTACACATCCCCTGATAAACTAAAGGCAAGTACTGATTTAAATAACTCCAAGATTGACCGATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493653.1
CDS CAA 90 bp ATAAATCAAAGTATCGGTCAATCTTGGAGTTATTTAAATCAGTACTaGCCTTTAGTTTATCAGGGGATGTGTAAGGAGCTTCAGGAGCAT +
Preference number: 6 (lower is better)
Translates to: INQSIGQSWSYLNQY*PLVYQGMCKELQEH
Trigger: ATGCTCCTGAAGCTCCTTACACATCCCCTGATAAACTAAAGGCAAGTACTGATTTAAATAACTCCAAGATTGACCGATACTTTGATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493653.1
CDS TCA 72 bp TTACTACATGTCAGAAGCAGAGGAAGAAGCTTAAAGTaGAGCCCTTTGACCTACTTTGAAAATAACTTACAA +
Preference number: 6 (lower is better)
Translates to: LLHVRSRGRSLK*SPLTYFENNLQ
Trigger: TTGTAAGTTATTTTCAAAGTAGGTCAAAGGGCTTCACTTTAAGCTTCTTCCTCTGCTTCTGACATGTAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466078.1
CDS GCA 72 bp AGAAGAGACAATAATTTTTCACTAACAGCTGCATGCTaGTTCAGATACTCCCGCCTTACATTTATATTTTTC +
Preference number: 6 (lower is better)
Translates to: RRDNNFSLTAAC*FRYSRLTFIFF
Trigger: GAAAAATATAAATGTAAGGCGGGAGTATCTGAAGCAGCATGCAGCTGTTAGTGAAAAATTATTGTCTCTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS GCA 72 bp TTCAATATCCTGTACTTTGACATAATCTGGGTCATGTaGCAAAAGGTGAATTGTATATGGAACAACATACTC +
Preference number: 6 (lower is better)
Translates to: FNILYFDIIWVM*QKVNCIWNNIL
Trigger: GAGTATGTTGTTCCATATACAATTCACCTTTTGGCACATGACCCAGATTATGTCAAAGTACAGGATATTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315596.15
ENST00000450460.5
CDS CAA 72 bp TCACCAACCATTTTTGTAGAATCAAAGCCTTTCCTTTaGAGTACTGGTCCAGATTGGAATTTACTTTTAACT +
Preference number: 6 (lower is better)
Translates to: SPTIFVESKPFL*STGPDWNLLLT
Trigger: AGTTAAAAGTAAATTCCAATCTGGACCAGTACTCAAAAGGAAAGGCTTTGATTCTACAAAAATGGTTGGTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498550.5