RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDPN (Homo sapiens)

Ensembl gene IDs: ENSG00000162493

Ensembl transcript IDs: ENST00000294489.10, ENST00000376057.8, ENST00000376061.8, ENST00000475043.5, ENST00000487038.5, ENST00000488631.1, ENST00000506205.1, ENST00000509009.5, ENST00000510906.5, ENST00000513143.5, ENST00000621990.5

Found 556 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCA +
Preference number: 1 (lower is better)
Translates to: PSVILASGEVTVDSE*ARQVFHGSSSPTSS
Trigger: TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR TCA 90 bp CTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTaGGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAG +
Preference number: 1 (lower is better)
Translates to: LSFGYFGKRRGHRGF*VGQASVPRVIFSHE
Trigger: CTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR CCA 90 bp GAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTaGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTC +
Preference number: 1 (lower is better)
Translates to: ERSFLRLFWQAERSP*ILSGPGKCSTGHLL
Trigger: GAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR CCA 90 bp TTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTaGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCAAG +
Preference number: 1 (lower is better)
Translates to: FRGAKSGERSFLRLF*QAERSPWILSGPGK
Trigger: CTTGCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR TCA 90 bp TTCTTTCTGCATGGGGGACAACTGGCTCTTGGTTTCAAACACACTTaGGCCTCTAGCACCATTAAGCATCCAGCAGCTTCCTCGGCATCC +
Preference number: 1 (lower is better)
Translates to: FFLHGGQLALGFKHT*ASSTIKHPAASSAS
Trigger: GGATGCCGAGGAAGCTGCTGGATGCTTAATGGTGCTAGAGGCTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCCCCATGCAGAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR CCA 90 bp AAGGATTTGGGTAAAGCAACTCTAGAGGCTGCCTGGTGGCCTACTTaGGAGAAACAAAGTGCCTTTGAGACTATCGACTTCCTGCTTGTG +
Preference number: 1 (lower is better)
Translates to: KDLGKATLEAAWWPT*EKQSAFETIDFLLV
Trigger: CACAAGCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAGAGTTGCTTTACCCAAATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
3UTR CCA 90 bp CATACCAGAGGCTCACACAGGATTTCTTTCTGCATGGGGGACAACTaGCTCTTGGTTTCAAACACACTTGAGCCTCTAGCACCATTAAGC +
Preference number: 1 (lower is better)
Translates to: HTRGSHRISFCMGDN*LLVSNTLEPLAPLS
Trigger: GCTTAATGGTGCTAGAGGCTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCCCCATGCAGAAAGAAATCCTGTGTGAGCCTCTGGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR TCA 90 bp TCTAGAGGCTGCCTGGTGGCCTACTTGGGAGAAACAAAGTGCCTTTaGGACTATCGACTTCCTGCTTGTGATCTAAAATGGATGTCTTTG +
Preference number: 1 (lower is better)
Translates to: SRGCLVAYLGETKCL*DYRLPACDLKWMSL
Trigger: CAAAGACATCCATTTTAGATCACAAGCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
3UTR GCA 90 bp GCAGATTTTATTTCTCATACCAGAGGCTCACACAGGATTTCTTTCTaGATGGGGGACAACTGGCTCTTGGTTTCAAACACACTTGAGCCT +
Preference number: 1 (lower is better)
Translates to: ADFISHTRGSHRISF*MGDNWLLVSNTLEP
Trigger: AGGCTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCCCCATGCAGAAAGAAATCCTGTGTGAGCCTCTGGTATGAGAAATAAAATCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR TCA 90 bp GAATGGGCTGTGCTTCCGAATGATAGTTTACTTTTTCCTGTTTTATaGATGCTTACAAATTTAGAGGATACCAGAATTGCACAACCGCCA +
Preference number: 1 (lower is better)
Translates to: EWAVLPNDSLLFPVL*MLTNLEDTRIAQPP
Trigger: TGGCGGTTGTGCAATTCTGGTATCCTCTAAATTTGTAAGCATTCATAAAACAGGAAAAAGTAAACTATCATTCGGAAGCACAGCCCATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR TCA 90 bp AGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGGTCACCGTGGATTCTaGGTGGGCCAGGCAAGTGTT +
Preference number: 2 (lower is better)
Translates to: RQVFHGSSSPTSSGTGHRGHRGF*VGQASV
Trigger: AACACTTGCCTGGCCCACTCAGAATCCACGGTGACC...TCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR CCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCAC +
Preference number: 2 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTTVDSE*ARQVFH
Trigger: GTGGAACACTTGCCTGGCCCACTCAGAATCCACGGT...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR TCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCAGGTCACCGTGGATTCTaGGTGGGCCAGGCAAGTGTT +
Preference number: 2 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPGHRGF*VGQASV
Trigger: AACACTTGCCTGGCCCACTCAGAATCCACGGTGACC...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR CCA 90 bp AGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCAC +
Preference number: 2 (lower is better)
Translates to: RQVFHGSSSPTSSGTGHRTVDSE*ARQVFH
Trigger: GTGGAACACTTGCCTGGCCCACTCAGAATCCACGGT...TCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR CCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCAACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCAC +
Preference number: 2 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPTVDSE*ARQVFH
Trigger: GTGGAACACTTGCCTGGCCCACTCAGAATCCACGGT...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR GCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAAACCACAACGATGATTaGACCAATGAAGCCGATGGC +
Preference number: 2 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTNHNDD*TNEADG
Trigger: GCCATCGGCTTCATTGGTGCAATCATCGTTGTGGTT...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488631.1
3UTR-3UTR TCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGGGTCACCGTGGATTCTaGGTGGGCCAGGCAAGTGTT +
Preference number: 2 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGGHRGF*VGQASV
Trigger: AACACTTGCCTGGCCCACTCAGAATCCACGGTGACC...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCATTCCTTCGGTTATTTTaGCAAGCGGAGAGGTCACCG +
Preference number: 2 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPFLRLF*QAERSP
Trigger: CGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAA...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR TCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGGGTCACCGTGGATTCTaGGTGGGCCAGGCAAGTGTT +
Preference number: 2 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRGHRGF*VGQASV
Trigger: AACACTTGCCTGGCCCACTCAGAATCCACGGTGACC...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR TCA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGAGCCAAGTCTGGTaGACGGTCTTTCCTTCGGTT +
Preference number: 2 (lower is better)
Translates to: FPSVILASGEVTVDSEWARSQVW*TVFPSV
Trigger: AACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCT...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR GCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTGGGAAGAGAGAAGGCTaGCCCCTTAGCCCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFGKREG*PLSPGS
Trigger: GGAGCCAGGGCTAAGGGGGCAGCCTTCTCTCTTCCC...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCAC +
Preference number: 2 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLTVDSE*ARQVFH
Trigger: GTGGAACACTTGCCTGGCCCACTCAGAATCCACGGT...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR TCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGGCTGGTGCTATTTACTaGCGTAGCACTGGATCCAAG +
Preference number: 2 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGAGAIY*RSTGSK
Trigger: CTTGGATCCAGTGCTACGTCAGTAAATAGCACCAGC...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp GCCAGCTGGATTTGGGAACACACAGACACACTGTTTAAAATAACATCCAGACATGCGGAGAGGTCACCGTaGATTCTGAGTGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: ASWIWEHTDTLFKITSRHAERSP*ILSGPG
Trigger: GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGC...ATGTCTGGATGTTATTTTAAACAGTGTGTCTGTGTGTTCCCAAATCCAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGTTCCTTCGGTTATTTTaGCAAGCGGAGAGGTCACCG +
Preference number: 2 (lower is better)
Translates to: SFLRLFWQAERSPWILSGFLRLF*QAERSP
Trigger: CGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAA...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR CCA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGAAGGATGTGCATCACTaGGAAGAGAGAAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: QALGPVYDLGWTVIFHSEKDVHH*EERRLP
Trigger: GGGCAGCCTTCTCTCTTCCCAGTGATGCACATCCTT...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGAAGGATGTGCATCACTaGGAAGAGAGAAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMKDVHH*EERRLP
Trigger: GGGCAGCCTTCTCTCTTCCCAGTGATGCACATCCTT...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGAGAGAAGTGCCAGGCTaGATGGTGCTGAGACAGAAT +
Preference number: 2 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGREVPG*MVLRQN
Trigger: ATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCT...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR TCA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGACAAAGCAGCCAATGTaGAGGATGTGCATCACTGGG +
Preference number: 2 (lower is better)
Translates to: QALGPVYDLGWTVIFHSETKQPM*RMCITG
Trigger: CCCAGTGATGCACATCCTTCACATTGGCTGCTTTGT...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR TCA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGTCCTCGCCGATACGGTaGAACCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: QALGPVYDLGWTVIFHSESSPIR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTATCGGCGAGGA...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCAC +
Preference number: 2 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKTVDSE*ARQVFH
Trigger: GTGGAACACTTGCCTGGCCCACTCAGAATCCACGGT...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR CCA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGGCCTGGTGGCCTACTTaGGAGAAACAAAGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMAWWPT*EKQSAF
Trigger: AAAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGC...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGGGGACAACTGGCTCTTaGTTTCAAACACACTTGAGC +
Preference number: 2 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGGTTGS*FQTHLS
Trigger: GCTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCC...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
50% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGATTTCTTTCTGCATaGGGGACAACTGGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: QALGPVYDLGWTVIFHSEGFLSA*GTTGSW
Trigger: CCAAGAGCCAGTTGTCCCCCATGCAGAAAGAAATCC...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR CAA 90 bp AGAGGCTCACACAGGATTTCTTTCTGCATGGGGGACAACTGGCTCTaGGTTTCAAACACACTTGAGCCTCTAGCACCATTAAGCATCCAG +
Preference number: 2 (lower is better)
Translates to: RGSHRISFCMGDNWL*VSNTLEPLAPLSIQ
Trigger: CTGGATGCTTAATGGTGCTAGAGGCTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCCCCATGCAGAAAGAAATCCTGTGTGAGCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGAGAGTCACCAAGTCATaGCTGGAGAAGGATTTGGGT +
Preference number: 2 (lower is better)
Translates to: QALGPVYDLGWTVIFHSERVTKS*LEKDLG
Trigger: ACCCAAATCCTTCTCCAGCCATGACTTGGTGACTCT...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTAAGGATGTGCATCACTaGGAAGAGAGAAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFKDVHH*EERRLP
Trigger: GGGCAGCCTTCTCTCTTCCCAGTGATGCACATCCTT...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR TCA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGGAAACAAAGTGCCTTTaGGACTATCGACTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMETKCL*DYRLPA
Trigger: AGCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTC...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGTCACCAAGTCATGGCTaGAGAAGGATTTGGGTAAAG +
Preference number: 2 (lower is better)
Translates to: QALGPVYDLGWTVIFHSESPSHG*RRIWVK
Trigger: CTTTACCCAAATCCTTCTCCAGCCATGACTTGGTGA...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGTCACCAAGTCATGGCTaGAGAAGGATTTGGGTAAAG +
Preference number: 2 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMSPSHG*RRIWVK
Trigger: CTTTACCCAAATCCTTCTCCAGCCATGACTTGGTGA...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTGGATTTCTTTCTGCATaGGGGACAACTGGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFGFLSA*GTTGSW
Trigger: CCAAGAGCCAGTTGTCCCCCATGCAGAAAGAAATCC...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGAATCCAATGGATATATaGGAAGAGAAGTGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGNPMDI*EEKCQA
Trigger: AGCCTGGCACTTCTCTTCCCATATATCCATTGGATT...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTAGAGTCACCAAGTCATaGCTGGAGAAGGATTTGGGT +
Preference number: 2 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFRVTKS*LEKDLG
Trigger: ACCCAAATCCTTCTCCAGCCATGACTTGGTGACTCT...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR TCA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGTCGACTTCCTGCTTGTaGTCTAAAATGGATGTCTTT +
Preference number: 2 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMSTSCL*SKMDVF
Trigger: AAAGACATCCATTTTAGATCACAAGCAGGAAGTCGA...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR GCA 90 bp CATCCAGCAGCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGTCAGCAATTGCAAAATaGTGGTGCTATTTACTGACG +
Preference number: 2 (lower is better)
Translates to: HPAASSASRLRYPYSRTKSAIAK*WCYLLT
Trigger: CGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGA...CTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGCTGCTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR GCA 90 bp CAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTTAAATCAGAGCAACTCTAGAGGCTaGCTGGTGGCCTACTTGGGA +
Preference number: 2 (lower is better)
Translates to: QIFAVCHEDWGCLLFLNQSNSRG*LVAYLG
Trigger: TCCCAAGTAGGCCACCAGGCAGCCTCTAGAGTTGCT...CTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR TCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTCGACTTCCTGCTTGTaGTCTAAAATGGATGTCTTT +
Preference number: 2 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFSTSCL*SKMDVF
Trigger: AAAGACATCCATTTTAGATCACAAGCAGGAAGTCGA...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR GCA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGCAGCAGATCAGCAATTaGAAAATGCTGGTGCTATTT +
Preference number: 2 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRQQISN*KMLVLF
Trigger: AAATAGCACCAGCATTTTGCAATTGCTGATCTGCTG...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
3UTR CCA 72 bp ATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCC +
Preference number: 3 (lower is better)
Translates to: ILASGEVTVDSE*ARQVFHGSSSP
Trigger: GGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR CCA 72 bp TTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTaGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGT +
Preference number: 3 (lower is better)
Translates to: FLRLFWQAERSP*ILSGPGKCSTG
Trigger: ACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR CCA 72 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTaGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGG +
Preference number: 3 (lower is better)
Translates to: AKSGERSFLRLF*QAERSPWILSG
Trigger: CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR CAA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGTTTCCTTCGGTTATTTaGGCAAGCGGAGAGGTCACC +
Preference number: 3 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGFPSVI*ASGEVT
Trigger: GGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CAA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGTTTCCTTCGGTTATTTaGGCAAGCGGAGAGGTCACC +
Preference number: 3 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLFPSVI*ASGEVT
Trigger: GGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR TCA 72 bp CATGGGGGACAACTGGCTCTTGGTTTCAAACACACTTaGGCCTCTAGCACCATTAAGCATCCAGCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: HGGQLALGFKHT*ASSTIKHPAAS
Trigger: GGAAGCTGCTGGATGCTTAATGGTGCTAGAGGCTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCCCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR CCA 72 bp GGTAAAGCAACTCTAGAGGCTGCCTGGTGGCCTACTTaGGAGAAACAAAGTGCCTTTGAGACTATCGACTTC +
Preference number: 3 (lower is better)
Translates to: GKATLEAAWWPT*EKQSAFETIDF
Trigger: GAAGTCGATAGTCTCAAAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAGAGTTGCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
3UTR CCA 72 bp GAGAAGGATTTGGGTAAAGCAACTCTAGAGGCTGCCTaGTGGCCTACTTGGGAGAAACAAAGTGCCTTTGAG +
Preference number: 3 (lower is better)
Translates to: EKDLGKATLEAA*WPTWEKQSAFE
Trigger: CTCAAAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAGAGTTGCTTTACCCAAATCCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
3UTR CCA 72 bp GGCTCACACAGGATTTCTTTCTGCATGGGGGACAACTaGCTCTTGGTTTCAAACACACTTGAGCCTCTAGCA +
Preference number: 3 (lower is better)
Translates to: GSHRISFCMGDN*LLVSNTLEPLA
Trigger: TGCTAGAGGCTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCCCCATGCAGAAAGAAATCCTGTGTGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR TCA 72 bp GATATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTaGGACAGAATGACCCCTTGGGCTCCTTTATTTTGT +
Preference number: 3 (lower is better)
Translates to: DIWEEKCQAGWC*DRMTPWAPLFC
Trigger: ACAAAATAAAGGAGCCCAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR CCA 72 bp CTCATACCAGAGGCTCACACAGGATTTCTTTCTGCATaGGGGACAACTGGCTCTTGGTTTCAAACACACTTG +
Preference number: 3 (lower is better)
Translates to: LIPEAHTGFLSA*GTTGSWFQTHL
Trigger: CAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCCCCATGCAGAAAGAAATCCTGTGTGAGCCTCTGGTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CAA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGAGACAGAATGACCCCTaGGGCTCCTTTATTTTGTTC +
Preference number: 3 (lower is better)
Translates to: QALGPVYDLGWTVIFHSERQNDP*GSFILF
Trigger: GAACAAAATAAAGGAGCCCAAGGGGTCATTCTGTCT...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR TCA 72 bp TGCCTGGTGGCCTACTTGGGAGAAACAAAGTGCCTTTaGGACTATCGACTTCCTGCTTGTGATCTAAAATGG +
Preference number: 3 (lower is better)
Translates to: CLVAYLGETKCL*DYRLPACDLKW
Trigger: CCATTTTAGATCACAAGCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
3UTR-3UTR CAA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTTTCCTTCGGTTATTTaGGCAAGCGGAGAGGTCACC +
Preference number: 3 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSFPSVI*ASGEVT
Trigger: GGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR CAA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACTTTCCTTCGGTTATTTaGGCAAGCGGAGAGGTCACC +
Preference number: 3 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYFPSVI*ASGEVT
Trigger: GGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
3UTR-3UTR CAA 90 bp CAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTTAAATCAGTTTCCTTCGGTTATTTaGGCAAGCGGAGAGGTCACC +
Preference number: 3 (lower is better)
Translates to: QIFAVCHEDWGCLLFLNQFPSVI*ASGEVT
Trigger: GGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA...CTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR-3UTR CAA 90 bp CAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTTAAATCAGTCAGCAGATCAGCAATaGCAAAATGCTGGTGCTATT +
Preference number: 3 (lower is better)
Translates to: QIFAVCHEDWGCLLFLNQSADQQ*QNAGAI
Trigger: AATAGCACCAGCATTTTGCAATTGCTGATCTGCTGA...CTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR CCA 72 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTaGGGATGTCTTCTATTTTTAAATCAGGTATTTAGT +
Preference number: 3 (lower is better)
Translates to: RTPQIFAVCHED*GCLLFLNQVFS
Trigger: ACTAAATACCTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR TCA 72 bp GTTCACCACGTGTTATCCAAGTTTAGATTTCCTAGTTaGTTATTCACACCAGATCAGGCTTTAAAAGATAGA +
Preference number: 3 (lower is better)
Translates to: VHHVLSKFRFPS*LFTPDQALKDR
Trigger: TCTATCTTTTAAAGCCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGTGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
3UTR CCA 72 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATaGTCCAGTGTTAGTTACAAATCAGTTTATACAGTT +
Preference number: 3 (lower is better)
Translates to: GDTWLQHIISIQ*SSVSYKSVYTV
Trigger: AACTGTATAAACTGATTTGTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGGCCACAGGCCCAGCCTaGAGGAGCGCGACGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WARQVFHGSSSPTSSGTGATGPA*RSATVG
Trigger: CCCCACCGTCGCGCTCCTCCAGGCTGGGCCTGTGGC...CCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGCTGTGCTGGCTCAGGTaGTCTGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQLCWLR*SARLSL
Trigger: GAGGCTGAGGCGGGCAGATCACCTGAGCCAGCACAG...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513143.5
CDS-3UTR GCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGCACACCCGCGCAGCTaGGTCTTTGGGACCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQAHPRS*VFGTWH
Trigger: GTGCCAGGTCCCAAAGACGCAGCTGCGCGGGTGTGC...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376061.8
ENST00000513143.5
CDS-3UTR TCA 90 bp TGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGACTGGTGGCCACGTTTaGGGCTGTGGCGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: WARQVFHGSSSPTSSGTGTGGHV*GCGAWT
Trigger: AGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGT...CCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGCAGGGCTGAGATGCTaGAGTGAGGGCGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQAGLRC*SEGAPL
Trigger: CAAGGGAGCGCCCTCACTTCAGCATCTCAGCCCTGC...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475043.5
ENST00000488631.1
CDS-3UTR GCA 90 bp CCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACATGTGCTGGCTCCTTCTaGCAGGACCCAGAGCGACGC +
Preference number: 4 (lower is better)
Translates to: PGKCSTGHLLPRAQGQGTCAGSF*QDPERR
Trigger: GCGTCGCTCTGGGTCCTGGCAGAAGGAGCCAGCACA...TGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCTTCGGCACCTGGCATaGCAACGCCGCCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: WARQVFHGSSSPTSSGTGLRHLA*QRRLPN
Trigger: GTTTGGAAGGCGGCGTTGCCATGCCAGGTGCCGAAG...CCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCTCCCCTCGCAGCCTGTaGATTCCGGGGCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LRLFWQAERSPWILSGPGSPRSL*IPGLLP
Trigger: CGGGAGGAGCCCCGGAATCCACAGGCTGCGAGGGGA...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513143.5
CDS-3UTR TCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGACTGGTGGCCACGTTTaGGGCTGTGGCGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQTGGHV*GCGAWT
Trigger: AGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGT...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTGCAGGGCTGAGATGCTaGAGTGAGGGCGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: ASVPRVIFSHELRDRAQSAGLRC*SEGAPL
Trigger: CAAGGGAGCGCCCTCACTTCAGCATCTCAGCCCTGC...ACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475043.5
ENST00000488631.1
CDS-3UTR CCA 90 bp GGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTGCCACAGGCCCAGCCTaGAGGAGCGCGACGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GERSFLRLFWQAERSPWIATGPA*RSATVG
Trigger: CCCCACCGTCGCGCTCCTCCAGGCTGGGCCTGTGGC...AATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGCTTCGGCACCTGGCATaGCAACGCCGCCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQLRHLA*QRRLPN
Trigger: GTTTGGAAGGCGGCGTTGCCATGCCAGGTGCCGAAG...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTGCGGAGAGGTCACCGTaGATTCTGAGTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ASVPRVIFSHELRDRAQSAERSP*ILSGPG
Trigger: GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGC...ACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCGCGGAGAGGTCACCGTaGATTCTGAGTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSAERSP*ILSGPG
Trigger: GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGC...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp CAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCACTGGTGGCCACGTTTaGGGCTGTGGCGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: QVFHGSSSPTSSGTGHRVTGGHV*GCGAWT
Trigger: AGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGT...GACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp TGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGACTTTCTCCGTGGAGTaGCTGGTGGCCACGTTTGAG +
Preference number: 4 (lower is better)
Translates to: WARQVFHGSSSPTSSGTGTFSVE*LVATFE
Trigger: CTCAAACGTGGCCACCAGTCACTCCACGGAGAAAGT...CCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp CCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGGTCACCGTGGATTCTaGGTGGGCCAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: PGKCSTGHLLPRAQGQGTGHRGF*VGQASV
Trigger: AACACTTGCCTGGCCCACTCAGAATCCACGGTGACC...TGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCATGTGCTGGCTCCTTCTaGCAGGACCCAGAGCGACGC +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPCAGSF*QDPERR
Trigger: GCGTCGCTCTGGGTCCTGGCAGAAGGAGCCAGCACA...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCCTTCGGCACCTGGCATaGCAACGCCGCCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSLRHLA*QRRLPN
Trigger: GTTTGGAAGGCGGCGTTGCCATGCCAGGTGCCGAAG...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCCCGTGGAGTGACTGGTaGCCACGTTTGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSPWSDW*PRLRLW
Trigger: CCACAGCCTCAAACGTGGCCACCAGTCACTCCACGG...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCAGCGGAGAGGTCACCGTaGATTCTGAGTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESAERSP*ILSGPG
Trigger: GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGC...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCGCGGAGAGGTCACCGTaGATTCTGAGTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LRLFWQAERSPWILSGPGAERSP*ILSGPG
Trigger: GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGC...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp CAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCGTGTCATCTTCTGGCTaGCCTGTGCTGGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: QVFHGSSSPTSSGTGHRVVSSSG*PVLARS
Trigger: GCTGCGAGCCAGCACAGGCCAGCCAGAAGATGACAC...GACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376061.8
CDS-3UTR TCA 90 bp GTCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCCCACATCGTTCCCGTTaGGTTGTTGCTCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VTVDSEWARQVFHGSSSPPHRSR*VVALLG
Trigger: CCCCAGGAGAGCAACAACTCAACGGGAACGATGTGG...GGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGAGGAGCCAAGTCTGGTaGACGGTCTTTCCTTCGGTT +
Preference number: 4 (lower is better)
Translates to: WARQVFHGSSSPTSSGTGRSQVW*TVFPSV
Trigger: AACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCT...CCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGCCGGGAGGCAGAGTTaGAGACTACGTTTCACACAC +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQAGRQS*RLRFTH
Trigger: GTGTGTGAAACGTAGTCTGCAACTCTGCCTCCCGGC...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTGGCGCTCCCTTGCTTTaGCCTGGTGAGCACAAAACG +
Preference number: 4 (lower is better)
Translates to: ASVPRVIFSHELRDRAQSGAPLL*PGEHKT
Trigger: CGTTTTGTGCTCACCAGGGCAAAGCAAGGGAGCGCC...ACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475043.5
ENST00000488631.1
CDS-3UTR GCA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCAGTGAGGGCGCTCCCTTaGTTTGCCCTGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESVRALP*FALVST
Trigger: TGTGCTCACCAGGGCAAAGCAAGGGAGCGCCCTCAC...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475043.5
ENST00000488631.1
CDS-3UTR GCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGCTTCTGGCTGGCCTGTaGTGGCCAGCAGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQLLAGL*WPAAFS
Trigger: AGAAAAAGCTGCTGGCCAGCACAGGCCAGCCAGAAG...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475043.5
CDS-3UTR CCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCATCATCTTCGGCACCTaGCATGGCAACGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSIIFGT*HGNAAF
Trigger: GAAGGCGGCGTTGCCATGCCAGGTGCCGAAGATGAT...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GTCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCATCATCTTCGGCACCTaGCATGGCAACGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: VTVDSEWARQVFHGSSSPIIFGT*HGNAAF
Trigger: GAAGGCGGCGTTGCCATGCCAGGTGCCGAAGATGAT...GGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACCGTGGAGTGACTGGTaGCCACGTTTGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPPWSDW*PRLRLW
Trigger: CCACAGCCTCAAACGTGGCCACCAGTCACTCCACGG...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTTCTCCGTGGAGTGACTaGTGGCCACGTTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ASVPRVIFSHELRDRAQSSPWSD*WPRLRL
Trigger: CAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGA...ACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGGGCCAGCTGGATTTaGGAACACACAGACACACTG +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQGASWI*EHTDTL
Trigger: CAGTGTGTCTGTGTGTTCCCAAATCCAGCTGGCCCC...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCACTTTCTCCGTGGAGTaGCTGGTGGCCACGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSTFSVE*LVATFE
Trigger: CTCAAACGTGGCCACCAGTCACTCCACGGAGAAAGT...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCAGGTCACCGTGGATTCTaGGTGGGCCAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESGHRGF*VGQASV
Trigger: AACACTTGCCTGGCCCACTCAGAATCCACGGTGACC...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAAGGAGCCAAGTCTGGTaGACGGTCTTTCCTTCGGTT +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTRSQVW*TVFPSV
Trigger: AACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCT...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACACATTCAGGAGCCGGCTaGAGGGAATCACAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTHSGAG*RESQLK
Trigger: CTTTAGCTGTGATTCCCTTCAGCCGGCTCCTGAATG...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488631.1
CDS-3UTR GCA 90 bp GCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTAGCAACTCTAGAGGCTaGCTGGTGGCCTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: ASVPRVIFSHELRDRAQSSNSRG*LVAYLG
Trigger: TCCCAAGTAGGCCACCAGGCAGCCTCTAGAGTTGCT...ACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTGGGTCGGCCGCAAGGTaGTCTCCGTCCGGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFGSAAR*SPSGRA
Trigger: AGCGCGCCCGGACGGAGACCACCTTGCGGCCGACCC...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS-3UTR CCA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCATCATCTTCGGCACCTaGCATGGCAACGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LRLFWQAERSPWILSGPGIIFGT*HGNAAF
Trigger: GAAGGCGGCGTTGCCATGCCAGGTGCCGAAGATGAT...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCATCTCCGTGGAGTGACTaGTGGCCACGTTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPSPWSD*WPRLRL
Trigger: CAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGA...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCATCTCCGTGGAGTGACTaGTGGCCACGTTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSSPWSD*WPRLRL
Trigger: CAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGA...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GTCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCCATCCACTTTCTCCGTaGAGTGACTGGTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: VTVDSEWARQVFHGSSSPHPLSP*SDWWPR
Trigger: ACGTGGCCACCAGTCACTCCACGGAGAAAGTGGATG...GGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp CAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: QVFHGSSSPTSSGTGHRVTVDSE*ARQVFH
Trigger: GTGGAACACTTGCCTGGCCCACTCAGAATCCACGGT...GACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp CCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAACTCTAGAGGCTGCCTaGTGGCCTACTTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PGKCSTGHLLPRAQGQGTTLEAA*WPTWEK
Trigger: TTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAGAGT...TGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GTCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCGGGGCCAGCTGGATTTaGGAACACACAGACACACTG +
Preference number: 4 (lower is better)
Translates to: VTVDSEWARQVFHGSSSPGASWI*EHTDTL
Trigger: CAGTGTGTCTGTGTGTTCCCAAATCCAGCTGGCCCC...GGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCTGTCCCCGCAGGCACTaGGTCCAGTGTATGACTTGG +
Preference number: 4 (lower is better)
Translates to: LRLFWQAERSPWILSGPGCPRRH*VQCMTW
Trigger: CCAAGTCATACACTGGACCCAGTGCCTGCGGGGACA...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACACTGGCTGGCCTGTGCTaGCCAGCAGCTTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTLAGLC*PAAFSL
Trigger: TAAAGAAAAAGCTGCTGGCCAGCACAGGCCAGCCAG...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475043.5
CDS-3UTR TCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCAACTTTCTCCGTGGAGTaGCTGGTGGCCACGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPTFSVE*LVATFE
Trigger: CTCAAACGTGGCCACCAGTCACTCCACGGAGAAAGT...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGTAAGACCCCAACTATaGTTCCAACCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQVRPQL*FQPGSL
Trigger: CAGTGACCCTGGTTGGAATCATAGTTGGGGTCTTAC...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GTCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCAGGAGCCAAGTCTGGTaGACGGTCTTTCCTTCGGTT +
Preference number: 4 (lower is better)
Translates to: VTVDSEWARQVFHGSSSPRSQVW*TVFPSV
Trigger: AACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCT...GGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAACAAAGCAGCCAATGTaGAGGATGTGCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTTKQPM*RMCITG
Trigger: CCCAGTGATGCACATCCTTCACATTGGCTGCTTTGT...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GTCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCGGTGCTGAGACAGAATaGCCCCTTGGGCTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: VTVDSEWARQVFHGSSSPGAETE*PLGLLY
Trigger: ATAAAGGAGCCCAAGGGGTCATTCTGTCTCAGCACC...GGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGCACAACCGCCATCATaGCAGAGCATCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSAQPPS*QSICSV
Trigger: CACTGAGCAGATGCTCTGTCATGATGGCGGTTGTGC...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACACTTGCGCGTGGACTGTaGTTTCTGAAGTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTLARGL*FLKLAD
Trigger: ATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAG...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGGGGAAGAGAGAAGGCTaGCCCCTTAGCCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGGKREG*PLSPGS
Trigger: GGAGCCAGGGCTAAGGGGGCAGCCTTCTCTCTTCCC...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCAGGGAAGAGAGAAGGCTaGCCCCTTAGCCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: AKSGERSFLRLFWQAERSGKREG*PLSPGS
Trigger: GGAGCCAGGGCTAAGGGGGCAGCCTTCTCTCTTCCC...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGGGGAGGAATGGGCTGTaGTTCCGAATGATAGTTTAC +
Preference number: 4 (lower is better)
Translates to: WARQVFHGSSSPTSSGTGGRNGL*FRMIVY
Trigger: GTAAACTATCATTCGGAAGCACAGCCCATTCCTCCC...CCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACTTCTGGCTGGCCTGTaGTGGCTCGCAGCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: AKSGERSFLRLFWQAERSLLAGL*WLAACG
Trigger: TCCACAGGCTGCGAGCCAGCACAGGCCAGCCAGAAG...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376061.8
CDS-3UTR CCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACATATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTYSGLR*FLESPH
Trigger: ATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATA...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGCCACGTTTGAGGCTGTaGCGCTTGGACTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQPRLRL*RLDFVL
Trigger: AAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGG...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCCCGTGGAGTGACTGGTaGCCACGTTTGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FPSVILASGEVTVDSEWAPWSDW*PRLRLW
Trigger: CCACAGCCTCAAACGTGGCCACCAGTCACTCCACGG...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCACATCCACTTTCTCCGTaGAGTGACTGGTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSHPLSP*SDWWPR
Trigger: ACGTGGCCACCAGTCACTCCACGGAGAAAGTGGATG...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCAACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESTVDSE*ARQVFH
Trigger: GTGGAACACTTGCCTGGCCCACTCAGAATCCACGGT...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGCGGAGAGGTCACCGTaGATTCTGAGTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRAERSP*ILSGPG
Trigger: GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGC...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCAGCGGAGAGGTCACCGTaGATTCTGAGTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AKSGERSFLRLFWQAERSAERSP*ILSGPG
Trigger: GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGC...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCACTCTAGAGGCTGCCTaGTGGCCTACTTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSTLEAA*WPTWEK
Trigger: TTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAGAGT...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCACTCTAGAGGCTGCCTaGTGGCCTACTTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: QVFHGSSSPTSSGTGHRVTLEAA*WPTWEK
Trigger: TTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAGAGT...GACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAAGAGAAGTGCCAGGCTaGATGGTGCTGAGACAGAAT +
Preference number: 4 (lower is better)
Translates to: PGKCSTGHLLPRAQGQGTREVPG*MVLRQN
Trigger: ATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCT...TGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGCTGGTGTTCAAATATaGAATCTGAGGCCGAGCGCA +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQAGVQI*NLRPSA
Trigger: TGCGCTCGGCCTCAGATTCCATATTTGAACACCAGC...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCACCGGCGCCAAAACGATaGTCTCAGGCCAGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSPAPKR*SQARFK
Trigger: TTTAAACCTGGCCTGAGATCATCGTTTTGGCGCCGG...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS-3UTR TCA 90 bp GTCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCTGCCTGTTACACTGTTaGCACTTGTTGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: VTVDSEWARQVFHGSSSPCLLHC*HLLPPE
Trigger: CTCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCA...GGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp CAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCTGCCTGTTACACTGTTaGCACTTGTTGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: QVFHGSSSPTSSGTGHRVCLLHC*HLLPPE
Trigger: CTCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCA...GACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTGTGGACTGTGCTTTCTaGAGTTGGCAGATCCTCGAT +
Preference number: 4 (lower is better)
Translates to: ASVPRVIFSHELRDRAQSVDCAF*SWQILD
Trigger: ATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCAC...ACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp AGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTAAGACCCCAACTATaGTTCCAACCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: RQVFHGSSSPTSSGTGHRVRPQL*FQPGSL
Trigger: CAGTGACCCTGGTTGGAATCATAGTTGGGGTCTTAC...TCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GTCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCGCTGGTGCTATTTACTaGCGTAGCACTGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: VTVDSEWARQVFHGSSSPAGAIY*RSTGSK
Trigger: CTTGGATCCAGTGCTACGTCAGTAAATAGCACCAGC...GGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCACAAAGCAGCCAATGTaGAGGATGTGCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSTKQPM*RMCITG
Trigger: CCCAGTGATGCACATCCTTCACATTGGCTGCTTTGT...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR TCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGATTTGCGGTATGTCATaGGGACTGGGGATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQICGMS*GLGMSS
Trigger: AGAAGACATCCCCAGTCCTCATGACATACCGCAAAT...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCAGGTGCTGAGACAGAATaGCCCCTTGGGCTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPGAETE*PLGLLY
Trigger: ATAAAGGAGCCCAAGGGGTCATTCTGTCTCAGCACC...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp AGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGATCCTCGCCGATACGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: RQVFHGSSSPTSSGTGHRSSPIR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTATCGGCGAGGA...TCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCGCTGAGATGCTGAAGTaGGGGCGCTCCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: FPSVILASGEVTVDSEWAAEMLK*GRSLAL
Trigger: CAAAGCAAGGGAGCGCCCTCACTTCAGCATCTCAGC...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475043.5
ENST00000488631.1
CDS-3UTR GCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGCTTGGACTTTGTTCTTaGGCGTGGACTGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQLGLCS*AWTVLS
Trigger: AGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAG...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCCGGGCCCTGGCAAAATaGGCTTTTATTCTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSRALAK*AFILLN
Trigger: GTTGAGCAGAATAAAAGCCCATTTTGCCAGGGCCCG...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS-3UTR CCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCTTCGGCACCTGGCATaGCAACGCCGCCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGLRHLA*QRRLPN
Trigger: GTTTGGAAGGCGGCGTTGCCATGCCAGGTGCCGAAG...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTTATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: ASVPRVIFSHELRDRAQSYSGLR*FLESPH
Trigger: ATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATA...ACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCTTTGTTCTTGCGCGTaGACTGTGCTTTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: WARQVFHGSSSPTSSGTGLCSCA*TVLSEV
Trigger: AACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAG...CCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCCCACGTTTGAGGCTGTaGCGCTTGGACTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSPRLRL*RLDFVL
Trigger: AAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGG...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCCACGTTTGAGGCTGTaGCGCTTGGACTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ASVPRVIFSHELRDRAQSPRLRL*RLDFVL
Trigger: AAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGG...ACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp CAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCTTCCTTCGGTTATTTTaGCAAGCGGAGAGGTCACCG +
Preference number: 4 (lower is better)
Translates to: QVFHGSSSPTSSGTGHRVFLRLF*QAERSP
Trigger: CGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAA...GACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTTCCTTCGGTTATTTTaGCAAGCGGAGAGGTCACCG +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSFLRLF*QAERSP
Trigger: CGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAA...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCCTAGAGGCTGCCTGGTaGCCTACTTGGGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: LRLFWQAERSPWILSGPGLEAAW*PTWEKQ
Trigger: TTGTTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAG...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGTCACCAAGTCATGGCTaGAGAAGGATTTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: WARQVFHGSSSPTSSGTGSPSHG*RRIWVK
Trigger: CTTTACCCAAATCCTTCTCCAGCCATGACTTGGTGA...CCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGAGAGTCACCAAGTCATaGCTGGAGAAGGATTTGGGT +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQRVTKS*LEKDLG
Trigger: ACCCAAATCCTTCTCCAGCCATGACTTGGTGACTCT...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCAGAGAAGTGCCAGGCTaGATGGTGCTGAGACAGAAT +
Preference number: 4 (lower is better)
Translates to: QVFHGSSSPTSSGTGHRVREVPG*MVLRQN
Trigger: ATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCT...GACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCGCTGGTGGGGCCAGCTaGATTTGGGAACACACAGAC +
Preference number: 4 (lower is better)
Translates to: FPSVILASGEVTVDSEWAAGGAS*IWEHTD
Trigger: GTCTGTGTGTTCCCAAATCCAGCTGGCCCCACCAGC...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTAAATGGAATCTGAGCTaGTGGGGCCAGCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: ASVPRVIFSHELRDRAQSKWNLS*WGQLDL
Trigger: CAAATCCAGCTGGCCCCACCAGCTCAGATTCCATTT...ACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCAAATGGAATCTGAGCTaGTGGGGCCAGCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSKWNLS*WGQLDL
Trigger: CAAATCCAGCTGGCCCCACCAGCTCAGATTCCATTT...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCGCTGGTGTTCAAATATaGAATCTGAGGCCGAGCGCA +
Preference number: 4 (lower is better)
Translates to: QVFHGSSSPTSSGTGHRVAGVQI*NLRPSA
Trigger: TGCGCTCGGCCTCAGATTCCATATTTGAACACCAGC...GACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCAGTGGACTGTGCTTTCTaGAGTTGGCAGATCCTCGAT +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPVDCAF*SWQILD
Trigger: ATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCAC...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp CCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAAACCAGGGTCACTGTTaGCAAACCATCTTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: PGKCSTGHLLPRAQGQGTNQGHC*QTIFLN
Trigger: GTTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTT...TGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAAACCAGGGTCACTGTTaGCAAACCATCTTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTNQGHC*QTIFLN
Trigger: GTTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTT...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCAGCTGGTGCTATTTACTaGCGTAGCACTGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPAGAIY*RSTGSK
Trigger: CTTGGATCCAGTGCTACGTCAGTAAATAGCACCAGC...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGAAACAAAGTGCCTTTaGGACTATCGACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQETKCL*DYRLPA
Trigger: AGCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTC...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGAAACAAAGTGCCTTTaGGACTATCGACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTETKCL*DYRLPA
Trigger: AGCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTC...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCAACAAAGCAGCCAATGTaGAGGATGTGCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPTKQPM*RMCITG
Trigger: CCCAGTGATGCACATCCTTCACATTGGCTGCTTTGT...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GTCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCATTTGCGGTATGTCATaGGGACTGGGGATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VTVDSEWARQVFHGSSSPICGMS*GLGMSS
Trigger: AGAAGACATCCCCAGTCCTCATGACATACCGCAAAT...GGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCAACTGGGTCCAGTGTATaGCTTGGGGTGGACTGTTAT +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPTGSSV*LGVDCY
Trigger: ATAACAGTCCACCCCAAGTCATACACTGGACCCAGT...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCACTTGCTTTGCCCTGGTaGGCACAAAACGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESLALPW*AQNGVI
Trigger: AATGACACCGTTTTGTGCTCACCAGGGCAAAGCAAG...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475043.5
ENST00000488631.1
CDS-3UTR TCA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCCTTGCTTTGCCCTGGTaGGCACAAAACGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: LRLFWQAERSPWILSGPGLALPW*AQNGVI
Trigger: AATGACACCGTTTTGTGCTCACCAGGGCAAAGCAAG...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475043.5
ENST00000488631.1
CDS-3UTR TCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGTATCTTCTGTATTTATaGTGTCCCTGCCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQYLLYL*CPCRCP
Trigger: TGGACAGCGGCAGGGACATCATAAATACAGAAGATA...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513143.5
CDS-3UTR GCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCACTTGCGCGTGGACTGTaGTTTCTGAAGTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSLARGL*FLKLAD
Trigger: ATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAG...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp CAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCCTTGGACTTTGTTCTTaGGCGTGGACTGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QVFHGSSSPTSSGTGHRVLGLCS*AWTVLS
Trigger: AGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAG...GACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCAACCACAACGATGATTaGACCAATGAAGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSNHNDD*TNEADG
Trigger: GCCATCGGCTTCATTGGTGCAATCATCGTTGTGGTT...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGCAACTCTAGAGGCTaGCTGGTGGCCTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: FPSVILASGEVTVDSEWASNSRG*LVAYLG
Trigger: TCCCAAGTAGGCCACCAGGCAGCCTCTAGAGTTGCT...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR GCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGAGAGGATACCAGAATTaGACAACCGCCATCATGACA +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQRGYQN*TTAIMT
Trigger: TGTCATGATGGCGGTTGTGCAATTCTGGTATCCTCT...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGCGCTCCCTTGCTTTaGCCTGGTGAGCACAAAACG +
Preference number: 4 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRGAPLL*PGEHKT
Trigger: CGTTTTGTGCTCACCAGGGCAAAGCAAGGGAGCGCC...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475043.5
ENST00000488631.1
CDS-3UTR GCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGACAGTTGTGAGCCACTaGACCCGGCCGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGTVVSH*TRPEHF
Trigger: GAAGTGTTCCGGCCGGGTGCAGTGGCTCACAACTGT...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513143.5
CDS-3UTR CCA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCAATCATCTTCGGCACCTaGCATGGCAACGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: AKSGERSFLRLFWQAERSIIFGT*HGNAAF
Trigger: GAAGGCGGCGTTGCCATGCCAGGTGCCGAAGATGAT...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTATCATCTTCGGCACCTaGCATGGCAACGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: GERSFLRLFWQAERSPWIIIFGT*HGNAAF
Trigger: GAAGGCGGCGTTGCCATGCCAGGTGCCGAAGATGAT...AATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCAGTCTTCGCTGGTTCCTaGAGTCACCACATCATCTTC +
Preference number: 4 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESVFAGS*SHHIIF
Trigger: GAAGATGATGTGGTGACTCCAGGAACCAGCGAAGAC...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCATATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPYSGLR*FLESPH
Trigger: ATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATA...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCATATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSYSGLR*FLESPH
Trigger: ATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATA...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCCCACGTTTGAGGCTGTaGCGCTTGGACTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LRLFWQAERSPWILSGPGPRLRL*RLDFVL
Trigger: AAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGG...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGCCGTGGAGTGACTGGTaGCCACGTTTGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRPWSDW*PRLRLW
Trigger: CCACAGCCTCAAACGTGGCCACCAGTCACTCCACGG...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGCCTGGTGGCCTACTTaGGAGAAACAAAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSAWWPT*EKQSAF
Trigger: AAAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGC...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGATTTCTTTCTGCATaGGGGACAACTGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSGFLSA*GTTGSW
Trigger: CCAAGAGCCAGTTGTCCCCCATGCAGAAAGAAATCC...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGGCTGGTGGGGCCAGCTaGATTTGGGAACACACAGAC +
Preference number: 4 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLAGGAS*IWEHTD
Trigger: GTCTGTGTGTTCCCAAATCCAGCTGGCCCCACCAGC...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTACTTTCTCCGTGGAGTaGCTGGTGGCCACGTTTGAG +
Preference number: 4 (lower is better)
Translates to: GERSFLRLFWQAERSPWITFSVE*LVATFE
Trigger: CTCAAACGTGGCCACCAGTCACTCCACGGAGAAAGT...AATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCAACCAGGGTCACTGTTaGCAAACCATCTTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSNQGHC*QTIFLN
Trigger: GTTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTT...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGCAGGCTGGATGGTGCTaGGACAGAATGACCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRQAGWC*DRMTPW
Trigger: CCAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTG...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGGCTGAGATGCTGAAGTaGGGGCGCTCCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRAEMLK*GRSLAL
Trigger: CAAAGCAAGGGAGCGCCCTCACTTCAGCATCTCAGC...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475043.5
ENST00000488631.1
CDS-3UTR GCA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGTTCCCGTTGAGTTGTTaGTCTCCTGGGGGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: QALGPVYDLGWTVIFHSEFPLSC*SPGGRA
Trigger: TGCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAA...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCATTGGCAGATCCTCGATaGGAATGCCTGTTACACTGT +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSLADPR*ECLLHC
Trigger: ACAGTGTAACAGGCATTCGCATCGAGGATCTGCCAA...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCCTTGGACTTTGTTCTTaGGCGTGGACTGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LRLFWQAERSPWILSGPGLGLCS*AWTVLS
Trigger: AGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAG...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAAACCACAACGATGATTaGACCAATGAAGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSNHNDD*TNEADG
Trigger: GCCATCGGCTTCATTGGTGCAATCATCGTTGTGGTT...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCAAACCACAACGATGATTaGACCAATGAAGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESNHNDD*TNEADG
Trigger: GCCATCGGCTTCATTGGTGCAATCATCGTTGTGGTT...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCAACCACAACGATGATTaGACCAATGAAGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: LRLFWQAERSPWILSGPGNHNDD*TNEADG
Trigger: GCCATCGGCTTCATTGGTGCAATCATCGTTGTGGTT...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCAGAGGATACCAGAATTaGACAACCGCCATCATGACA +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSRGYQN*TTAIMT
Trigger: TGTCATGATGGCGGTTGTGCAATTCTGGTATCCTCT...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGGCCGGGAGGCAGAGTTaGAGACTACGTTTCACACAC +
Preference number: 4 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLAGRQS*RLRFTH
Trigger: GTGTGTGAAACGTAGTCTGCAACTCTGCCTCCCGGC...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCTTTGTTCTTGCGCGTaGACTGTGCTTTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: ASVPRVIFSHELRDRAQSLCSCA*TVLSEV
Trigger: AACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAG...ACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCCTTTGTTCTTGCGCGTaGACTGTGCTTTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSLCSCA*TVLSEV
Trigger: AACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAG...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGTVDSE*ARQVFH
Trigger: GTGGAACACTTGCCTGGCCCACTCAGAATCCACGGT...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRTVDSE*ARQVFH
Trigger: GTGGAACACTTGCCTGGCCCACTCAGAATCCACGGT...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCCTAGAGGCTGCCTGGTaGCCTACTTGGGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: FPSVILASGEVTVDSEWALEAAW*PTWEKQ
Trigger: TTGTTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAG...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCACCAAGTCATGGCTaGAGAAGGATTTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSSPSHG*RRIWVK
Trigger: CTTTACCCAAATCCTTCTCCAGCCATGACTTGGTGA...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAACTGGCTCTTaGTTTCAAACACACTTGAGC +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSGTTGS*FQTHLS
Trigger: GCTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCC...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAAATCCAATGGATATATaGGAAGAGAAGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTNPMDI*EEKCQA
Trigger: AGCCTGGCACTTCTCTTCCCATATATCCATTGGATT...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCAGGGGCCAGCTGGATTTaGGAACACACAGACACACTG +
Preference number: 4 (lower is better)
Translates to: AKSGERSFLRLFWQAERSGASWI*EHTDTL
Trigger: CAGTGTGTCTGTGTGTTCCCAAATCCAGCTGGCCCC...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CATCCAGCAGCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGGCTGGTGGGGCCAGCTaGATTTGGGAACACACAGAC +
Preference number: 4 (lower is better)
Translates to: HPAASSASRLRYPYSRTKAGGAS*IWEHTD
Trigger: GTCTGTGTGTTCCCAAATCCAGCTGGCCCCACCAGC...CTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGCTGCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTCTGGCTCGCAGCCTGTaGATTCCGGGGCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSLARSL*IPGLLP
Trigger: CGGGAGGAGCCCCGGAATCCACAGGCTGCGAGCCAG...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376061.8
CDS-3UTR CCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGGTGTCATCTTCTGGCTaGCCTGTGCTGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRVSSSG*PVLAQV
Trigger: CACCTGAGCCAGCACAGGCCAGCCAGAAGATGACAC...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513143.5
CDS-3UTR TCA 90 bp GGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTAACGAAGAGCAGAGCTaGCACCTTCCACATCGTTCC +
Preference number: 4 (lower is better)
Translates to: GERSFLRLFWQAERSPWINEEQS*HLPHRS
Trigger: GGAACGATGTGGAAGGTGTCAGCTCTGCTCTTCGTT...AATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTACTGGTGGCCACGTTTaGGGCTGTGGCGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFTGGHV*GCGAWT
Trigger: AGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGT...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAAACCAGGGTCACTGTTaGCAAACCATCTTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSNQGHC*QTIFLN
Trigger: GTTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTT...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCAACCAGGGTCACTGTTaGCAAACCATCTTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: LRLFWQAERSPWILSGPGNQGHC*QTIFLN
Trigger: GTTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTT...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGAGGAGCCAAGTCTGGTaGACGGTCTTTCCTTCGGTT +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGRSQVW*TVFPSV
Trigger: AACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCT...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp CCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACATCGACTTCCTGCTTGTaGTCTAAAATGGATGTCTTT +
Preference number: 4 (lower is better)
Translates to: PGKCSTGHLLPRAQGQGTSTSCL*SKMDVF
Trigger: AAAGACATCCATTTTAGATCACAAGCAGGAAGTCGA...TGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACATCGACTTCCTGCTTGTaGTCTAAAATGGATGTCTTT +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTSTSCL*SKMDVF
Trigger: AAAGACATCCATTTTAGATCACAAGCAGGAAGTCGA...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGTCGACTTCCTGCTTGTaGTCTAAAATGGATGTCTTT +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQSTSCL*SKMDVF
Trigger: AAAGACATCCATTTTAGATCACAAGCAGGAAGTCGA...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCGGTTTCAAACACACTTaGGCCTCTAGCACCATTAAG +
Preference number: 4 (lower is better)
Translates to: LRLFWQAERSPWILSGPGGFKHT*ASSTIK
Trigger: CTTAATGGTGCTAGAGGCTCAAGTGTGTTTGAAACC...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACATCAGCAATTGCAAAATaGTGGTGCTATTTACTGACG +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTSAIAK*WCYLLT
Trigger: CGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGA...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACACAGCAGATCAGCAATTaGAAAATGCTGGTGCTATTT +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTQQISN*KMLVLF
Trigger: AAATAGCACCAGCATTTTGCAATTGCTGATCTGCTG...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGAGCAACTCTAGAGGCTaGCTGGTGGCCTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: QALGPVYDLGWTVIFHSESNSRG*LVAYLG
Trigger: TCCCAAGTAGGCCACCAGGCAGCCTCTAGAGTTGCT...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAAGAGGATACCAGAATTaGACAACCGCCATCATGACA +
Preference number: 4 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSRGYQN*TTAIMT
Trigger: TGTCATGATGGCGGTTGTGCAATTCTGGTATCCTCT...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGGCCGGGAGGCAGAGTTaGAGACTACGTTTCACACAC +
Preference number: 4 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMAGRQS*RLRFTH
Trigger: GTGTGTGAAACGTAGTCTGCAACTCTGCCTCCCGGC...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp CTTCCCGACATTTTTCGCATAACCACAACGATGATTGCACCAATGAAGCCGATGGTGAGGGCGCTCCCTTaGTTTGCCCTGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LPDIFRITTTMIAPMKPMVRALP*FALVST
Trigger: TGTGCTCACCAGGGCAAAGCAAGGGAGCGCCCTCAC...CATCGGCTTCATTGGTGCAATCATCGTTGTGGTTATGCGAAAAATGTCGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488631.1
CDS-3UTR CCA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCGTCTTCGCTGGTTCCTaGAGTCACCACATCATCTTC +
Preference number: 4 (lower is better)
Translates to: FPSVILASGEVTVDSEWAVFAGS*SHHIIF
Trigger: GAAGATGATGTGGTGACTCCAGGAACCAGCGAAGAC...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACTTTGTTCTTGCGCGTaGACTGTGCTTTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPLCSCA*TVLSEV
Trigger: AACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAG...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCCCACGTTTGAGGCTGTaGCGCTTGGACTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FPSVILASGEVTVDSEWAPRLRL*RLDFVL
Trigger: AAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGG...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTCCGTGGAGTGACTGGTaGCCACGTTTGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFPWSDW*PRLRLW
Trigger: CCACAGCCTCAAACGTGGCCACCAGTCACTCCACGG...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CATCCAGCAGCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCATCCACTTTCTCCGTaGAGTGACTGGTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: HPAASSASRLRYPYSRTKHPLSP*SDWWPR
Trigger: ACGTGGCCACCAGTCACTCCACGGAGAAAGTGGATG...CTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGCTGCTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCATCACCAAGTCATGGCTaGAGAAGGATTTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPSPSHG*RRIWVK
Trigger: CTTTACCCAAATCCTTCTCCAGCCATGACTTGGTGA...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAAAGGATGTGCATCACTaGGAAGAGAGAAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRKDVHH*EERRLP
Trigger: GGGCAGCCTTCTCTCTTCCCAGTGATGCACATCCTT...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGAAGGATGTGCATCACTaGGAAGAGAGAAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGKDVHH*EERRLP
Trigger: GGGCAGCCTTCTCTCTTCCCAGTGATGCACATCCTT...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAAATGGAATCTGAGCTaGTGGGGCCAGCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: FPSVILASGEVTVDSEWAKWNLS*WGQLDL
Trigger: CAAATCCAGCTGGCCCCACCAGCTCAGATTCCATTT...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAACGAAGAGCAGAGCTaGCACCTTCCACATCGTTCC +
Preference number: 4 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRNEEQS*HLPHRS
Trigger: GGAACGATGTGGAAGGTGTCAGCTCTGCTCTTCGTT...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGTGCCTGTTACACTGTTaGCACTTGTTGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGCLLHC*HLLPPE
Trigger: CTCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCA...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTTGCCTGTTACACTGTTaGCACTTGTTGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: GERSFLRLFWQAERSPWICLLHC*HLLPPE
Trigger: CTCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCA...AATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGTGCCTGTTACACTGTTaGCACTTGTTGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLCLLHC*HLLPPE
Trigger: CTCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCA...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGGTGGACTGTGCTTTCTaGAGTTGGCAGATCCTCGAT +
Preference number: 4 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLVDCAF*SWQILD
Trigger: ATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCAC...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGGTGGACTGTGCTTTCTaGAGTTGGCAGATCCTCGAT +
Preference number: 4 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGVDCAF*SWQILD
Trigger: ATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCAC...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGTGGACTGTGCTTTCTaGAGTTGGCAGATCCTCGAT +
Preference number: 4 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRVDCAF*SWQILD
Trigger: ATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCAC...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGTAAGACCCCAACTATaGTTCCAACCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRVRPQL*FQPGSL
Trigger: CAGTGACCCTGGTTGGAATCATAGTTGGGGTCTTAC...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTGTAAGACCCCAACTATaGTTCCAACCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GERSFLRLFWQAERSPWIVRPQL*FQPGSL
Trigger: CAGTGACCCTGGTTGGAATCATAGTTGGGGTCTTAC...AATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGGGTCACCGTGGATTCTaGGTGGGCCAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKGHRGF*VGQASV
Trigger: AACACTTGCCTGGCCCACTCAGAATCCACGGTGACC...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGCTGGTGCTATTTACTaGCGTAGCACTGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRAGAIY*RSTGSK
Trigger: CTTGGATCCAGTGCTACGTCAGTAAATAGCACCAGC...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCAGGCTGGATGGTGCTaGGACAGAATGACCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKQAGWC*DRMTPW
Trigger: CCAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTG...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGAGGAGAATTGCTTTTTaGCATCCTGACACATGTATA +
Preference number: 4 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQRRIAF*HPDTCI
Trigger: TATACATGTGTCAGGATGTCAAAAAGCAATTCTCCT...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGACTGGGTCCAGTGTATaGCTTGGGGTGGACTGTTAT +
Preference number: 4 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGTGSSV*LGVDCY
Trigger: ATAACAGTCCACCCCAAGTCATACACTGGACCCAGT...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGTTCCCGTTGAGTTGTTaGTCTCCTGGGGGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKFPLSC*SPGGRA
Trigger: TGCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAA...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GCCAGCTGGATTTGGGAACACACAGACACACTGTTTAAAATAACATCCAGACATTGTGCTGGCTCCTTCTaGCAGGACCCAGAGCGACGC +
Preference number: 4 (lower is better)
Translates to: ASWIWEHTDTLFKITSRHCAGSF*QDPERR
Trigger: GCGTCGCTCTGGGTCCTGGCAGAAGGAGCCAGCACA...ATGTCTGGATGTTATTTTAAACAGTGTGTCTGTGTGTTCCCAAATCCAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCTTGGCAGATCCTCGATaGGAATGCCTGTTACACTGT +
Preference number: 4 (lower is better)
Translates to: FPSVILASGEVTVDSEWALADPR*ECLLHC
Trigger: ACAGTGTAACAGGCATTCGCATCGAGGATCTGCCAA...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGCTTGCGCGTGGACTGTaGTTTCTGAAGTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGLARGL*FLKLAD
Trigger: ATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAG...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp AGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGATCAGCAATTGCAAAATaGTGGTGCTATTTACTGACG +
Preference number: 4 (lower is better)
Translates to: RQVFHGSSSPTSSGTGHRSAIAK*WCYLLT
Trigger: CGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGA...TCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTGGGAAGAGAGAAGGCTaGCCCCTTAGCCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSGKREG*PLSPGS
Trigger: GGAGCCAGGGCTAAGGGGGCAGCCTTCTCTCTTCCC...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCAAAAACATGTCTACACTaGATTGAGCACCAACACAGG +
Preference number: 4 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPKTCLH*IEHQHR
Trigger: CCTGTGTTGGTGCTCAATGCAGTGTAGACATGTTTT...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp ACAAGAATGGTCAGACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGCACACCCGCGCAGCTaGGTCTTTGGGACCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TRMVRRRHMVTAYNIDPMAHPRS*VFGTWH
Trigger: GTGCCAGGTCCCAAAGACGCAGCTGCGCGGGTGTGC...CATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTCTGACCATTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376061.8
ENST00000513143.5
CDS-3UTR CCA 90 bp TTCAGCTCTTTAGGGCCTTCCCGACATTTTTCGCATAACCACAACGATGATTGCATCATCTTCGGCACCTaGCATGGCAACGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: FSSLGPSRHFSHNHNDDCIIFGT*HGNAAF
Trigger: GAAGGCGGCGTTGCCATGCCAGGTGCCGAAGATGAT...GCAATCATCGTTGTGGTTATGCGAAAAATGTCGGGAAGGCCCTAAAGAGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488631.1
CDS-3UTR CCA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCAGTCTTCGCTGGTTCCTaGAGTCACCACATCATCTTC +
Preference number: 4 (lower is better)
Translates to: AKSGERSFLRLFWQAERSVFAGS*SHHIIF
Trigger: GAAGATGATGTGGTGACTCCAGGAACCAGCGAAGAC...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGGTCTTCGCTGGTTCCTaGAGTCACCACATCATCTTC +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGVFAGS*SHHIIF
Trigger: GAAGATGATGTGGTGACTCCAGGAACCAGCGAAGAC...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGATTCCTTCGGTTATTTTaGCAAGCGGAGAGGTCACCG +
Preference number: 4 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRFLRLF*QAERSP
Trigger: CGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAA...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGGCCTGGTGGCCTACTTaGGAGAAACAAAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGAWWPT*EKQSAF
Trigger: AAAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGC...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGCTAGAGGCTGCCTGGTaGCCTACTTGGGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMLEAAW*PTWEKQ
Trigger: TTGTTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAG...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGTATGTCATGAGGACTaGGGATGTCTTCTATTTTTA +
Preference number: 4 (lower is better)
Translates to: PGKCSTGHLLPRAQGQGTVCHED*GCLLFL
Trigger: TAAAAATAGAAGACATCCCCAGTCCTCATGACATAC...TGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTAGAGAAGTGCCAGGCTaGATGGTGCTGAGACAGAAT +
Preference number: 4 (lower is better)
Translates to: GERSFLRLFWQAERSPWIREVPG*MVLRQN
Trigger: ATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCT...AATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACACTTCTCTCAATCAGCTaGTGTTCAAATATGGAATCT +
Preference number: 4 (lower is better)
Translates to: EWARQVFHGSSSPTSSGTLLSIS*CSNMES
Trigger: AGATTCCATATTTGAACACCAGCTGATTGAGAGAAG...TGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCAGTCCAGTGTATGACTTaGGGTGGACTGTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESVQCMT*GGLLFF
Trigger: GAAAAATAACAGTCCACCCCAAGTCATACACTGGAC...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGAGCAAACTTTGCAGTTaGGAACTTTCCGAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLSKLCS*ELSERS
Trigger: ACTCCGCTCGGAAAGTTCTCAACTGCAAAGTTTGCT...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294489.10
ENST00000376057.8
CDS-3UTR TCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGAGCAAACTTTGCAGTTaGGAACTTTCCGAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGSKLCS*ELSERS
Trigger: ACTCCGCTCGGAAAGTTCTCAACTGCAAAGTTTGCT...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294489.10
ENST00000376057.8
CDS-3UTR TCA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGTGCCTGTTACACTGTTaGCACTTGTTGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: QALGPVYDLGWTVIFHSECLLHC*HLLPPE
Trigger: CTCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCA...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTACTTTCTCCGTGGAGTaGCTGGTGGCCACGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFTFSVE*LVATFE
Trigger: CTCAAACGTGGCCACCAGTCACTCCACGGAGAAAGT...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAACCAGGGTCACTGTTaGCAAACCATCTTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: FPSVILASGEVTVDSEWANQGHC*QTIFLN
Trigger: GTTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTT...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGGTAAGACCCCAACTATaGTTCCAACCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRVRPQL*FQPGSL
Trigger: CAGTGACCCTGGTTGGAATCATAGTTGGGGTCTTAC...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCATCGACTTCCTGCTTGTaGTCTAAAATGGATGTCTTT +
Preference number: 4 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESSTSCL*SKMDVF
Trigger: AAAGACATCCATTTTAGATCACAAGCAGGAAGTCGA...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCAATTTGCGGTATGTCATaGGGACTGGGGATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: AKSGERSFLRLFWQAERSICGMS*GLGMSS
Trigger: AGAAGACATCCCCAGTCCTCATGACATACCGCAAAT...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGTGTGCTGGCTCCTTCTaGCAGGACCCAGAGCGACGC +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVCAGSF*QDPERR
Trigger: GCGTCGCTCTGGGTCCTGGCAGAAGGAGCCAGCACA...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR GCA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTCTTCTGGCTGGCCTGTaGTGGCTCCTTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSLLAGL*WLLLPG
Trigger: TCCTGGCAGAAGGAGCCAGCACAGGCCAGCCAGAAG...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGCTTCTGGCTGGCCTGTaGTGGCTCCTTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FQQISNCKMLVLFTDVALLLAGL*WLLLPG
Trigger: TCCTGGCAGAAGGAGCCAGCACAGGCCAGCCAGAAG...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGTTGGCAGATCCTCGATaGGAATGCCTGTTACACTGT +
Preference number: 4 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGLADPR*ECLLHC
Trigger: ACAGTGTAACAGGCATTCGCATCGAGGATCTGCCAA...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGCTTGCGCGTGGACTGTaGTTTCTGAAGTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMLARGL*FLKLAD
Trigger: ATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAG...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACGGGAAGAGAGAAGGCTaGCCCCTTAGCCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYGKREG*PLSPGS
Trigger: GGAGCCAGGGCTAAGGGGGCAGCCTTCTCTCTTCCC...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR GCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGGGGAGGAATGGGCTGTaGTTCCGAATGATAGTTTAC +
Preference number: 4 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGGRNGL*FRMIVY
Trigger: GTAAACTATCATTCGGAAGCACAGCCCATTCCTCCC...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
50% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CATCCAGCAGCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGGTCTTCGCTGGTTCCTaGAGTCACCACATCATCTTC +
Preference number: 4 (lower is better)
Translates to: HPAASSASRLRYPYSRTKVFAGS*SHHIIF
Trigger: GAAGATGATGTGGTGACTCCAGGAACCAGCGAAGAC...CTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGCTGCTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGTATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRYSGLR*FLESPH
Trigger: ATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATA...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGCCGTGGAGTGACTGGTaGCCACGTTTGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FQQISNCKMLVLFTDVALPWSDW*PRLRLW
Trigger: CCACAGCCTCAAACGTGGCCACCAGTCACTCCACGG...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACGCGGAGAGGTCACCGTaGATTCTGAGTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYAERSP*ILSGPG
Trigger: GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGC...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGTTCCTTCGGTTATTTTaGCAAGCGGAGAGGTCACCG +
Preference number: 4 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRFLRLF*QAERSP
Trigger: CGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAA...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGGCTGGTGTTCAAATATaGAATCTGAGGCCGAGCGCA +
Preference number: 4 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRAGVQI*NLRPSA
Trigger: TGCGCTCGGCCTCAGATTCCATATTTGAACACCAGC...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CCCTTCAGCTCTTTAGGGCCTTCCCGACATTTTTCGCATAACCACAACGATGATGTGTCATCTTCTGGCTaGCCTGTGCTGGCTTTGACA +
Preference number: 4 (lower is better)
Translates to: PFSSLGPSRHFSHNHNDDVSSSG*PVLALT
Trigger: TGTCAAAGCCAGCACAGGCCAGCCAGAAGATGACAC...ATCATCGTTGTGGTTATGCGAAAAATGTCGGGAAGGCCCTAAAGAGCTGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488631.1
CDS-3UTR TCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGAACGAAGAGCAGAGCTaGCACCTTCCACATCGTTCC +
Preference number: 4 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKNEEQS*HLPHRS
Trigger: GGAACGATGTGGAAGGTGTCAGCTCTGCTCTTCGTT...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACACTGGTGGCCACGTTTaGGGCTGTGGCGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYTGGHV*GCGAWT
Trigger: AGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGT...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGACTGGTGGCCACGTTTaGGGCTGTGGCGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVTGGHV*GCGAWT
Trigger: AGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGT...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR TCA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGGGTCACCGTGGATTCTaGGTGGGCCAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: FQQISNCKMLVLFTDVALGHRGF*VGQASV
Trigger: AACACTTGCCTGGCCCACTCAGAATCCACGGTGACC...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGGGTTTCAAACACACTTaGGCCTCTAGCACCATTAAG +
Preference number: 4 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLGFKHT*ASSTIK
Trigger: CTTAATGGTGCTAGAGGCTCAAGTGTGTTTGAAACC...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGCTTCTGGCTGGCCTGTaGTGGCTCCTTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVLLAGL*WLLLPG
Trigger: TCCTGGCAGAAGGAGCCAGCACAGGCCAGCCAGAAG...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR GCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGTTGGCAGATCCTCGATaGGAATGCCTGTTACACTGT +
Preference number: 4 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRLADPR*ECLLHC
Trigger: ACAGTGTAACAGGCATTCGCATCGAGGATCTGCCAA...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACCTTCGGCACCTGGCATaGCAACGCCGCCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYLRHLA*QRRLPN
Trigger: GTTTGGAAGGCGGCGTTGCCATGCCAGGTGCCGAAG...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGCTTCGGCACCTGGCATaGCAACGCCGCCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVLRHLA*QRRLPN
Trigger: GTTTGGAAGGCGGCGTTGCCATGCCAGGTGCCGAAG...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGCCGTGGAGTGACTGGTaGCCACGTTTGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVPWSDW*PRLRLW
Trigger: CCACAGCCTCAAACGTGGCCACCAGTCACTCCACGG...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CCA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGTCTCCGTGGAGTGACTaGTGGCCACGTTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FQQISNCKMLVLFTDVALSPWSD*WPRLRL
Trigger: CAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGA...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGAAGGATGTGCATCACTaGGAAGAGAGAAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKKDVHH*EERRLP
Trigger: GGGCAGCCTTCTCTCTTCCCAGTGATGCACATCCTT...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGGGGACAACTGGCTCTTaGTTTCAAACACACTTGAGC +
Preference number: 4 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMGTTGS*FQTHLS
Trigger: GCTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCC...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CATCCAGCAGCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGGGGACAACTGGCTCTTaGTTTCAAACACACTTGAGC +
Preference number: 4 (lower is better)
Translates to: HPAASSASRLRYPYSRTKGTTGS*FQTHLS
Trigger: GCTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCC...CTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGCTGCTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGTGCATGGGGGACAACTaGCTCTTGGTTTCAAACACA +
Preference number: 4 (lower is better)
Translates to: QALGPVYDLGWTVIFHSECMGDN*LLVSNT
Trigger: TGTGTTTGAAACCAAGAGCCAGTTGTCCCCCATGCA...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGTGTCCCCGCAGGCACTaGGTCCAGTGTATGACTTGG +
Preference number: 4 (lower is better)
Translates to: FQQISNCKMLVLFTDVALCPRRH*VQCMTW
Trigger: CCAAGTCATACACTGGACCCAGTGCCTGCGGGGACA...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGGTGGACTGTGCTTTCTaGAGTTGGCAGATCCTCGAT +
Preference number: 4 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKVDCAF*SWQILD
Trigger: ATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCAC...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGGTAAGACCCCAACTATaGTTCCAACCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKVRPQL*FQPGSL
Trigger: CAGTGACCCTGGTTGGAATCATAGTTGGGGTCTTAC...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACGGTCACCGTGGATTCTaGGTGGGCCAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYGHRGF*VGQASV
Trigger: AACACTTGCCTGGCCCACTCAGAATCCACGGTGACC...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp ACAAGAATGGTCAGACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGGTCACCGTGGATTCTaGGTGGGCCAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: TRMVRRRHMVTAYNIDPMGHRGF*VGQASV
Trigger: AACACTTGCCTGGCCCACTCAGAATCCACGGTGACC...CATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTCTGACCATTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACCAGGCTGGATGGTGCTaGGACAGAATGACCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYQAGWC*DRMTPW
Trigger: CCAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTG...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTGCACAACCGCCATCATaGCAGAGCATCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSAQPPS*QSICSV
Trigger: CACTGAGCAGATGCTCTGTCATGATGGCGGTTGTGC...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGATGCTTTTTGACATCCTaGCACATGTATAATTGCCGG +
Preference number: 4 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRCFLTS*HMYNCR
Trigger: CCGGCAATTATACATGTGTCAGGATGTCAAAAAGCA...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGTGCTTTTTGACATCCTaGCACATGTATAATTGCCGG +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGCFLTS*HMYNCR
Trigger: CCGGCAATTATACATGTGTCAGGATGTCAAAAAGCA...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGTTCCCGTTGAGTTGTTaGTCTCCTGGGGGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVFPLSC*SPGGRA
Trigger: TGCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAA...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR GCA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGCTTCTGGCTGGCCTGTaGTGGCTCCTTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRLLAGL*WLLLPG
Trigger: TCCTGGCAGAAGGAGCCAGCACAGGCCAGCCAGAAG...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTTAAATCAGCTTCGGCACCTGGCATaGCAACGCCGCCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: QIFAVCHEDWGCLLFLNQLRHLA*QRRLPN
Trigger: GTTTGGAAGGCGGCGTTGCCATGCCAGGTGCCGAAG...CTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACCTTCGGCACCTGGCATaGCAACGCCGCCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDLRHLA*QRRLPN
Trigger: GTTTGGAAGGCGGCGTTGCCATGCCAGGTGCCGAAG...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGATCATCTTCGGCACCTaGCATGGCAACGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVIIFGT*HGNAAF
Trigger: GAAGGCGGCGTTGCCATGCCAGGTGCCGAAGATGAT...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGTCTCCGTGGAGTGACTaGTGGCCACGTTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVSPWSD*WPRLRL
Trigger: CAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGA...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTGCCTGGTGGCCTACTTaGGAGAAACAAAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFAWWPT*EKQSAF
Trigger: AAAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGC...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGGGATTTCTTTCTGCATaGGGGACAACTGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKGFLSA*GTTGSW
Trigger: CCAAGAGCCAGTTGTCCCCCATGCAGAAAGAAATCC...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGGTCCAGTGTATGACTTaGGGTGGACTGTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGVQCMT*GGLLFF
Trigger: GAAAAATAACAGTCCACCCCAAGTCATACACTGGAC...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACTGTCCCCGCAGGCACTaGGTCCAGTGTATGACTTGG +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYCPRRH*VQCMTW
Trigger: CCAAGTCATACACTGGACCCAGTGCCTGCGGGGACA...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGACAGCTAAAGCTTCCCTaGGCAAAAACAAAGGATGTT +
Preference number: 4 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRQLKLP*AKTKDV
Trigger: AACATCCTTTGTTTTTGCCCAGGGAAGCTTTAGCTG...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488631.1
CDS-3UTR TCA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGCCACATCGTTCCCGTTaGGTTGTTGCTCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRPHRSR*VVALLG
Trigger: CCCCAGGAGAGCAACAACTCAACGGGAACGATGTGG...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGACTTTCTCCGTGGAGTaGCTGGTGGCCACGTTTGAG +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVTFSVE*LVATFE
Trigger: CTCAAACGTGGCCACCAGTCACTCCACGGAGAAAGT...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR GCA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGTCAGCAATTGCAAAATaGTGGTGCTATTTACTGACG +
Preference number: 4 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLSAIAK*WCYLLT
Trigger: CGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGA...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGTCAGCAATTGCAAAATaGTGGTGCTATTTACTGACG +
Preference number: 4 (lower is better)
Translates to: SFLRLFWQAERSPWILSGSAIAK*WCYLLT
Trigger: CGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGA...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGACAGCAGATCAGCAATTaGAAAATGCTGGTGCTATTT +
Preference number: 4 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRQQISN*KMLVLF
Trigger: AAATAGCACCAGCATTTTGCAATTGCTGATCTGCTG...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACAGCAGATCAGCAATTaGAAAATGCTGGTGCTATTT +
Preference number: 4 (lower is better)
Translates to: AKSGERSFLRLFWQAERSQQISN*KMLVLF
Trigger: AAATAGCACCAGCATTTTGCAATTGCTGATCTGCTG...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGCAGCAGATCAGCAATTaGAAAATGCTGGTGCTATTT +
Preference number: 4 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLQQISN*KMLVLF
Trigger: AAATAGCACCAGCATTTTGCAATTGCTGATCTGCTG...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGAAAACATGTCTACACTaGATTGAGCACCAACACAGG +
Preference number: 4 (lower is better)
Translates to: QALGPVYDLGWTVIFHSEKTCLH*IEHQHR
Trigger: CCTGTGTTGGTGCTCAATGCAGTGTAGACATGTTTT...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGCAGGACTGCGGGCCCTaGCAAAATGGGCTTTTATTC +
Preference number: 4 (lower is better)
Translates to: FQQISNCKMLVLFTDVALQDCGP*QNGLLF
Trigger: GAATAAAAGCCCATTTTGCCAGGGCCCGCAGTCCTG...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS-3UTR CCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACTCTCCGTGGAGTGACTaGTGGCCACGTTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDSPWSD*WPRLRL
Trigger: CAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGA...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp ACAAGAATGGTCAGACGGAGACACATGGTTACAGCATATAATATCGATCCAATGCATCCACTTTCTCCGTaGAGTGACTGGTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: TRMVRRRHMVTAYNIDPMHPLSP*SDWWPR
Trigger: ACGTGGCCACCAGTCACTCCACGGAGAAAGTGGATG...CATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTCTGACCATTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGCATCCACTTTCTCCGTaGAGTGACTGGTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVHPLSP*SDWWPR
Trigger: ACGTGGCCACCAGTCACTCCACGGAGAAAGTGGATG...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CCA 90 bp ACAAGAATGGTCAGACGGAGACACATGGTTACAGCATATAATATCGATCCAATGACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: TRMVRRRHMVTAYNIDPMTVDSE*ARQVFH
Trigger: GTGGAACACTTGCCTGGCCCACTCAGAATCCACGGT...CATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTCTGACCATTCTTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp GCCAGCTGGATTTGGGAACACACAGACACACTGTTTAAAATAACATCCAGACATACTCTAGAGGCTGCCTaGTGGCCTACTTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ASWIWEHTDTLFKITSRHTLEAA*WPTWEK
Trigger: TTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAGAGT...ATGTCTGGATGTTATTTTAAACAGTGTGTCTGTGTGTTCCCAAATCCAGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAATCCAATGGATATATaGGAAGAGAAGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRNPMDI*EEKCQA
Trigger: AGCCTGGCACTTCTCTTCCCATATATCCATTGGATT...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCAGTGTATGACTTGGGGTaGACTGTTATTTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: AKSGERSFLRLFWQAERSVYDLG*TVIFHS
Trigger: ACTGTGAAAAATAACAGTCCACCCCAAGTCATACAC...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
3UTR CAA 72 bp CACAGGATTTCTTTCTGCATGGGGGACAACTGGCTCTaGGTTTCAAACACACTTGAGCCTCTAGCACCATTA +
Preference number: 4 (lower is better)
Translates to: HRISFCMGDNWL*VSNTLEPLAPL
Trigger: TAATGGTGCTAGAGGCTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCCCCATGCAGAAAGAAATCCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGAACGAAGAGCAGAGCTaGCACCTTCCACATCGTTCC +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVNEEQS*HLPHRS
Trigger: GGAACGATGTGGAAGGTGTCAGCTCTGCTCTTCGTT...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR TCA 90 bp GCCAGCTGGATTTGGGAACACACAGACACACTGTTTAAAATAACATCCAGACATGTAAGACCCCAACTATaGTTCCAACCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: ASWIWEHTDTLFKITSRHVRPQL*FQPGSL
Trigger: CAGTGACCCTGGTTGGAATCATAGTTGGGGTCTTAC...ATGTCTGGATGTTATTTTAAACAGTGTGTCTGTGTGTTCCCAAATCCAGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACAGGAGCCAAGTCTGGTaGACGGTCTTTCCTTCGGTT +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYRSQVW*TVFPSV
Trigger: AACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCT...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp CAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTTAAATCAGGCACAACCGCCATCATaGCAGAGCATCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QIFAVCHEDWGCLLFLNQAQPPS*QSICSV
Trigger: CACTGAGCAGATGCTCTGTCATGATGGCGGTTGTGC...CTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGAGGAGAATTGCTTTTTaGCATCCTGACACATGTATA +
Preference number: 4 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLRRIAF*HPDTCI
Trigger: TATACATGTGTCAGGATGTCAAAAAGCAATTCTCCT...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTCCTCGCCGATACGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSSSPIR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTATCGGCGAGGA...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGACTGGGTCCAGTGTATaGCTTGGGGTGGACTGTTAT +
Preference number: 4 (lower is better)
Translates to: FQQISNCKMLVLFTDVALTGSSV*LGVDCY
Trigger: ATAACAGTCCACCCCAAGTCATACACTGGACCCAGT...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGGGGAAAGGGACCACATaGAACAAACGGGGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKGKGTT*NKRGFK
Trigger: TTTAAAACCCCGTTTGTTGCATGTGGTCCCTTTCCC...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS-3UTR GCA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGAGCAACTCTAGAGGCTaGCTGGTGGCCTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRSNSRG*LVAYLG
Trigger: TCCCAAGTAGGCCACCAGGCAGCCTCTAGAGTTGCT...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GCCAGCTGGATTTGGGAACACACAGACACACTGTTTAAAATAACATCCAGACATGTCTTCGCTGGTTCCTaGAGTCACCACATCATCTTC +
Preference number: 4 (lower is better)
Translates to: ASWIWEHTDTLFKITSRHVFAGS*SHHIIF
Trigger: GAAGATGATGTGGTGACTCCAGGAACCAGCGAAGAC...ATGTCTGGATGTTATTTTAAACAGTGTGTCTGTGTGTTCCCAAATCCAGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSYSGLR*FLESPH
Trigger: ATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATA...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACCATCCACTTTCTCCGTaGAGTGACTGGTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDHPLSP*SDWWPR
Trigger: ACGTGGCCACCAGTCACTCCACGGAGAAAGTGGATG...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACACCGTGGATTCTGAGTaGGCCAGGCAAGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDTVDSE*ARQVFH
Trigger: GTGGAACACTTGCCTGGCCCACTCAGAATCCACGGT...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGTTCCTTCGGTTATTTTaGCAAGCGGAGAGGTCACCG +
Preference number: 4 (lower is better)
Translates to: FQQISNCKMLVLFTDVALFLRLF*QAERSP
Trigger: CGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAA...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp ACAAGAATGGTCAGACGGAGACACATGGTTACAGCATATAATATCGATCCAATGCTAGAGGCTGCCTGGTaGCCTACTTGGGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: TRMVRRRHMVTAYNIDPMLEAAW*PTWEKQ
Trigger: TTGTTTCTCCCAAGTAGGCCACCAGGCAGCCTCTAG...CATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTCTGACCATTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGGTATGTCATGAGGACTaGGGATGTCTTCTATTTTTA +
Preference number: 4 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGVCHED*GCLLFL
Trigger: TAAAAATAGAAGACATCCCCAGTCCTCATGACATAC...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGTGCCTGTTACACTGTTaGCACTTGTTGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVCLLHC*HLLPPE
Trigger: CTCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCA...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR TCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGGTGGACTGTGCTTTCTaGAGTTGGCAGATCCTCGAT +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVVDCAF*SWQILD
Trigger: ATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCAC...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR TCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGGTAAGACCCCAACTATaGTTCCAACCAGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVVRPQL*FQPGSL
Trigger: CAGTGACCCTGGTTGGAATCATAGTTGGGGTCTTAC...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR GCA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTTGGCAGATCCTCGATaGGAATGCCTGTTACACTGT +
Preference number: 4 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSLADPR*ECLLHC
Trigger: ACAGTGTAACAGGCATTCGCATCGAGGATCTGCCAA...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGCTTGCGCGTGGACTGTaGTTTCTGAAGTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVLARGL*FLKLAD
Trigger: ATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAG...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR GCA 90 bp ACAAGAATGGTCAGACGGAGACACATGGTTACAGCATATAATATCGATCCAATGCTTGCGCGTGGACTGTaGTTTCTGAAGTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: TRMVRRRHMVTAYNIDPMLARGL*FLKLAD
Trigger: ATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAG...CATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTCTGACCATTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTCTTGGACTTTGTTCTTaGGCGTGGACTGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSLGLCS*AWTVLS
Trigger: AGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAG...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTGGGAGGAATGGGCTGTaGTTCCGAATGATAGTTTAC +
Preference number: 4 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSGRNGL*FRMIVY
Trigger: GTAAACTATCATTCGGAAGCACAGCCCATTCCTCCC...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGGTCTTCGCTGGTTCCTaGAGTCACCACATCATCTTC +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVVFAGS*SHHIIF
Trigger: GAAGATGATGTGGTGACTCCAGGAACCAGCGAAGAC...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACTATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYYSGLR*FLESPH
Trigger: ATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATA...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGTATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACAT +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVYSGLR*FLESPH
Trigger: ATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATA...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGCCACGTTTGAGGCTGTaGCGCTTGGACTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVPRLRL*RLDFVL
Trigger: AAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGG...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CCA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGAGAGTCACCAAGTCATaGCTGGAGAAGGATTTGGGT +
Preference number: 4 (lower is better)
Translates to: FQQISNCKMLVLFTDVALRVTKS*LEKDLG
Trigger: ACCCAAATCCTTCTCCAGCCATGACTTGGTGACTCT...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGCTTCTCTCAATCAGCTaGTGTTCAAATATGGAATCT +
Preference number: 4 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMLLSIS*CSNMES
Trigger: AGATTCCATATTTGAACACCAGCTGATTGAGAGAAG...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTGTCCAGTGTATGACTTaGGGTGGACTGTTATTTTTC +
Preference number: 4 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFVQCMT*GGLLFF
Trigger: GAAAAATAACAGTCCACCCCAAGTCATACACTGGAC...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp CAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTTAAATCAGGCTGGTGCTATTTACTaGCGTAGCACTGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: QIFAVCHEDWGCLLFLNQAGAIY*RSTGSK
Trigger: CTTGGATCCAGTGCTACGTCAGTAAATAGCACCAGC...CTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACACAAAGCAGCCAATGTaGAGGATGTGCATCACTGGG +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDTKQPM*RMCITG
Trigger: CCCAGTGATGCACATCCTTCACATTGGCTGCTTTGT...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GCCAGCTGGATTTGGGAACACACAGACACACTGTTTAAAATAACATCCAGACATGGTTTCAAACACACTTaGGCCTCTAGCACCATTAAG +
Preference number: 4 (lower is better)
Translates to: ASWIWEHTDTLFKITSRHGFKHT*ASSTIK
Trigger: CTTAATGGTGCTAGAGGCTCAAGTGTGTTTGAAACC...ATGTCTGGATGTTATTTTAAACAGTGTGTCTGTGTGTTCCCAAATCCAGCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACTCCTCGCCGATACGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDSSPIR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTATCGGCGAGGA...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGTTGGCAGATCCTCGATaGGAATGCCTGTTACACTGT +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVLADPR*ECLLHC
Trigger: ACAGTGTAACAGGCATTCGCATCGAGGATCTGCCAA...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR GCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACCTTGCGCGTGGACTGTaGTTTCTGAAGTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDLARGL*FLKLAD
Trigger: ATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAG...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGCTTGGACTTTGTTCTTaGGCGTGGACTGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVLGLCS*AWTVLS
Trigger: AGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAG...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR GCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGAACCACAACGATGATTaGACCAATGAAGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVNHNDD*TNEADG
Trigger: GCCATCGGCTTCATTGGTGCAATCATCGTTGTGGTT...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR GCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACAACCACAACGATGATTaGACCAATGAAGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYNHNDD*TNEADG
Trigger: GCCATCGGCTTCATTGGTGCAATCATCGTTGTGGTT...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGCTTTGTTCTTGCGCGTaGACTGTGCTTTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: FQQISNCKMLVLFTDVALLCSCA*TVLSEV
Trigger: AACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAG...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGCCTGGTGGCCTACTTaGGAGAAACAAAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDAWWPT*EKQSAF
Trigger: AAAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGC...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp ACAAGAATGGTCAGACGGAGACACATGGTTACAGCATATAATATCGATCCAATGTGCATGGGGGACAACTaGCTCTTGGTTTCAAACACA +
Preference number: 4 (lower is better)
Translates to: TRMVRRRHMVTAYNIDPMCMGDN*LLVSNT
Trigger: TGTGTTTGAAACCAAGAGCCAGTTGTCCCCCATGCA...CATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTCTGACCATTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGGATTTCTTTCTGCATaGGGGACAACTGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDGFLSA*GTTGSW
Trigger: CCAAGAGCCAGTTGTCCCCCATGCAGAAAGAAATCC...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTGTGTATGACTTGGGGTaGACTGTTATTTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFVYDLG*TVIFHS
Trigger: ACTGTGAAAAATAACAGTCCACCCCAAGTCATACAC...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGGTGTATGACTTGGGGTaGACTGTTATTTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKVYDLG*TVIFHS
Trigger: ACTGTGAAAAATAACAGTCCACCCCAAGTCATACAC...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGAACCAGGGTCACTGTTaGCAAACCATCTTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVNQGHC*QTIFLN
Trigger: GTTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTT...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR TCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACGAAACAAAGTGCCTTTaGGACTATCGACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYETKCL*DYRLPA
Trigger: AGCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTC...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR GCA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGCTTGGACTTTGTTCTTaGGCGTGGACTGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRLGLCS*AWTVLS
Trigger: AGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAG...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR GCA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTAAAACATGTCTACACTaGATTGAGCACCAACACAGG +
Preference number: 4 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSKTCLH*IEHQHR
Trigger: CCTGTGTTGGTGCTCAATGCAGTGTAGACATGTTTT...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGCTTTGTTCTTGCGCGTaGACTGTGCTTTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVLCSCA*TVLSEV
Trigger: AACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAG...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CCA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGAGAGTCACCAAGTCATaGCTGGAGAAGGATTTGGGT +
Preference number: 4 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRRVTKS*LEKDLG
Trigger: ACCCAAATCCTTCTCCAGCCATGACTTGGTGACTCT...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACTGCATGGGGGACAACTaGCTCTTGGTTTCAAACACA +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDCMGDN*LLVSNT
Trigger: TGTGTTTGAAACCAAGAGCCAGTTGTCCCCCATGCA...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CCA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGGTATGTCATGAGGACTaGGGATGTCTTCTATTTTTA +
Preference number: 4 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKVCHED*GCLLFL
Trigger: TAAAAATAGAAGACATCCCCAGTCCTCATGACATAC...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTCGACTTCCTGCTTGTaGTCTAAAATGGATGTCTTT +
Preference number: 4 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSSTSCL*SKMDVF
Trigger: AAAGACATCCATTTTAGATCACAAGCAGGAAGTCGA...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR TCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGAAACAAAGTGCCTTTaGGACTATCGACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDETKCL*DYRLPA
Trigger: AGCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTC...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR GCA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGAATGGGCTTTTATTCTaGTCAACAACAGGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: FQQISNCKMLVLFTDVALNGLLF*STTGGK
Trigger: TTTCCCTCCTGTTGTTGAGCAGAATAAAAGCCCATT...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS-3UTR GCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGACGATGGCTTTCATTTaGCTATCACATGGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVTMAFI*LSHGCK
Trigger: CTTACACCCATGTGATAGGCAAATGAAAGCCATCGT...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CCA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGTCACCAAGTCATGGCTaGAGAAGGATTTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRSPSHG*RRIWVK
Trigger: CTTTACCCAAATCCTTCTCCAGCCATGACTTGGTGA...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR TCA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGTGCTTTTTGACATCCTaGCACATGTATAATTGCCGG +
Preference number: 4 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRCFLTS*HMYNCR
Trigger: CCGGCAATTATACATGTGTCAGGATGTCAAAAAGCA...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp GCCAGCTGGATTTGGGAACACACAGACACACTGTTTAAAATAACATCCAGACATAGGAGAATTGCTTTTTaGCATCCTGACACATGTATA +
Preference number: 4 (lower is better)
Translates to: ASWIWEHTDTLFKITSRHRRIAF*HPDTCI
Trigger: TATACATGTGTCAGGATGTCAAAAAGCAATTCTCCT...ATGTCTGGATGTTATTTTAAACAGTGTGTCTGTGTGTTCCCAAATCCAGCTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR GCA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACCAGCAGATCAGCAATTaGAAAATGCTGGTGCTATTT +
Preference number: 4 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYQQISN*KMLVLF
Trigger: AAATAGCACCAGCATTTTGCAATTGCTGATCTGCTG...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACAATCCAATGGATATATaGGAAGAGAAGTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDNPMDI*EEKCQA
Trigger: AGCCTGGCACTTCTCTTCCCATATATCCATTGGATT...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR TCA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGATTAGTTCAAAGATTTaGGTTCTAGACACGATGGCT +
Preference number: 4 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVISSKI*VLDTMA
Trigger: AGCCATCGTGTCTAGAACTCAAATCTTTGAACTAAT...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR GCA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGTCAGCAATTGCAAAATaGTGGTGCTATTTACTGACG +
Preference number: 4 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRSAIAK*WCYLLT
Trigger: CGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGA...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CCA 90 bp CAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTTAAATCAGCTTCTCTCAATCAGCTaGTGTTCAAATATGGAATCT +
Preference number: 4 (lower is better)
Translates to: QIFAVCHEDWGCLLFLNQLLSIS*CSNMES
Trigger: AGATTCCATATTTGAACACCAGCTGATTGAGAGAAG...CTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS CCA 90 bp ATTTATCTCTCCCGAGGAGGCGGGGGAGCGGGGTCGGCCGCAAGGTaGTCTCCGTCCGGGCGCGCTAGGCCCGCCCTCGGGCTCTGTTTG +
Preference number: 5 (lower is better)
Translates to: IYLSRGGGGAGSAAR*SPSGRARPALGLCL
Trigger: CAAACAGAGCCCGAGGGCGGGCCTAGCGCGCCCGGACGGAGACCACCTTGCGGCCGACCCCGCTCCCCCGCCTCCTCGGGAGAGATAAAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS TCA 90 bp GCGCTAGGCCCGCCCTCGGGCTCTGTTTGGCCGGCGCCAAAACGATaGTCTCAGGCCAGGTTTAAAGTTACAGGGCCGCAGCTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: ALGPPSGSVWPAPKR*SQARFKVTGPQLRG
Trigger: CCCCCGCAGCTGCGGCCCTGTAACTTTAAACCTGGCCTGAGATCATCGTTTTGGCGCCGGCCAAACAGAGCCCGAGGGCGGGCCTAGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS GCA 90 bp CCTGTGCTGGCTCGAATACCAGGCCCGGGCATTCCAGCAAGTCTCTaGTCGCTCGTCCCCATCAGCGACGGCAGGAAGCCACTTGCGCTG +
Preference number: 5 (lower is better)
Translates to: PVLARIPGPGIPASL*SLVPISDGRKPLAL
Trigger: CAGCGCAAGTGGCTTCCTGCCGTCGCTGATGGGGACGAGCGAGCAGAGACTTGCTGGAATGCCCGGGCCTGGTATTCGAGCCAGCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509009.5
CDS-3UTR CAA 90 bp CAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCAGTGAGGGCGCTCCCTaGCTTTGCCCTGGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: QVFHGSSSPTSSGTGHRVSEGAP*LCPGEH
Trigger: GTGCTCACCAGGGCAAAGCAAGGGAGCGCCCTCACT...GACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475043.5
ENST00000488631.1
CDS-3UTR CAA 90 bp TGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGTTGAGGCTGTGGCGCTaGGACTTTGTTCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: WARQVFHGSSSPTSSGTGLRLWR*DFVLAR
Trigger: ACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAA...CCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAATCGTTCCCGTTGAGTaGTTGCTCTCCTGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSIVPVE*LLSWGP
Trigger: CGGCCCCCAGGAGAGCAACAACTCAACGGGAACGAT...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGGCTTGGACTTTGTTCTaGCGCGTGGACTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: WARQVFHGSSSPTSSGTGAWTLF*RVDCAF
Trigger: GAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGC...CCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS TCA 90 bp GGCCTGTGCTGGCCAGCAGCTTTTTCTTTAGCAGGGCTGAGATGCTaGAGTGAGGGCGCTCCCTTGCTTTGCCCTGGTGAGCACAAAACG +
Preference number: 5 (lower is better)
Translates to: GLCWPAAFSLAGLRC*SEGAPLLCPGEHKT
Trigger: CGTTTTGTGCTCACCAGGGCAAAGCAAGGGAGCGCCCTCACTTCAGCATCTCAGCCCTGCTAAAGAAAAAGCTGCTGGCCAGCACAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475043.5
CDS CCA 90 bp GCGGTCTTCGCTGGTTCCTGGAGTCACCACATCATCTTCGGCACCTaGCATGGCAACGCCGCCTTCCAAACCTGTAGTCTCAGTGTCATC +
Preference number: 5 (lower is better)
Translates to: AVFAGSWSHHIIFGT*HGNAAFQTCSLSVI
Trigger: GATGACACTGAGACTACAGGTTTGGAAGGCGGCGTTGCCATGCCAGGTGCCGAAGATGATGTGGTGACTCCAGGAACCAGCGAAGACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000488631.1
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS CCA 90 bp CACCAGAGTTGTCAAGCCAGACTTATAGCGGTCTTCGCTGGTTCCTaGAGTCACCACATCATCTTCGGCACCTGGCATGGCAACGCCGCC +
Preference number: 5 (lower is better)
Translates to: HQSCQARLIAVFAGS*SHHIIFGTWHGNAA
Trigger: GGCGGCGTTGCCATGCCAGGTGCCGAAGATGATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATAAGTCTGGCTTGACAACTCTGGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCGTTCCCGTTGAGTTGTaGCTCTCCTGGGGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: FPSVILASGEVTVDSEWAVPVEL*LSWGPS
Trigger: GCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAAC...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGCTTGGACTTTGTTCTaGCGCGTGGACTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQAWTLF*RVDCAF
Trigger: GAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGC...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCATGTCTACACTGCATaGAGCACCAACACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: WARQVFHGSSSPTSSGTGHVYTA*STNTGV
Trigger: CACACCTGTGTTGGTGCTCAATGCAGTGTAGACATG...CCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS TCA 90 bp CCGAGCTTCCCAGACCCTAGGCAGCCGGACAGCAAACTTTGCAGTTaGGAACTTTCCGAGCGGAGTCAGCATTTATCTCTCCCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: PSFPDPRQPDSKLCS*ELSERSQHLSLPRR
Trigger: CCTCCTCGGGAGAGATAAATGCTGACTCCGCTCGGAAAGTTCTCAACTGCAAAGTTTGCTGTCCGGCTGCCTAGGGTCTGGGAAGCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294489.10
ENST00000376057.8
CDS TCA 90 bp TGTGTCTCCATCCACTTTCTCCGTGGAGTGACTGGTGGCCACGTTTaGGGCTGTGGCGCTTGGACTTTGTTCTTGCGCGTGGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: CVSIHFLRGVTGGHV*GCGAWTLFLRVDCA
Trigger: AGCACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGAAAGTGGATGGAGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS CCA 90 bp TCTCAGAGTTGTCAAGCCAGACTTATAGCGGTCTTCGCTGGTTCCTaGAGTCACCACATCATCTTCGGCACCTGGCATGGCAACGCCGCC +
Preference number: 5 (lower is better)
Translates to: SQSCQARLIAVFAGS*SHHIIFGTWHGNAA
Trigger: GGCGGCGTTGCCATGCCAGGTGCCGAAGATGATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATAAGTCTGGCTTGACAACTCTGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488631.1
CDS-3UTR CAA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGGTTCCCGTTGAGTTGTaGCTCTCCTGGGGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGVPVEL*LSWGPS
Trigger: GCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAAC...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp CCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACACTGTGCTTTCTGAAGTaGGCAGATCCTCGATGCGAA +
Preference number: 5 (lower is better)
Translates to: PGKCSTGHLLPRAQGQGTLCFLK*ADPRCE
Trigger: TTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAG...TGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCGCTTGGACTTTGTTCTaGCGCGTGGACTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSAWTLF*RVDCAF
Trigger: GAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGC...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCTGTGGCGCTTGGACTTaGTTCTTGCGCGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: LRLFWQAERSPWILSGPGCGAWT*FLRVDC
Trigger: ACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACA...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCATTGAGGCTGTGGCGCTaGGACTTTGTTCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESLRLWR*DFVLAR
Trigger: ACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAA...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp AGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGTTTCCTTCGGTTATTTaGGCAAGCGGAGAGGTCACC +
Preference number: 5 (lower is better)
Translates to: SGPGKCSTGHLLPRAQGQFPSVI*ASGEVT
Trigger: GGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA...CTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAAGTGAGGGCGCTCCCTaGCTTTGCCCTGGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRSEGAP*LCPGEH
Trigger: GTGCTCACCAGGGCAAAGCAAGGGAGCGCCCTCACT...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475043.5
ENST00000488631.1
CDS-3UTR CAA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCGGCTTCACCCCCGAGTaGTTAAACGCCTTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: FPSVILASGEVTVDSEWAGFTPE*LNAFPS
Trigger: CGAGGGGAAGGCGTTTAACAACTCGGGGGTGAAGCC...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513143.5
CDS CCA 90 bp GTGGCCACGTTTGAGGCTGTGGCGCTTGGACTTTGTTCTTGCGCGTaGACTGTGCTTTCTGAAGTTGGCAGATCCTCGATGCGAATGCCT +
Preference number: 5 (lower is better)
Translates to: VATFEAVALGLCSCA*TVLSEVGRSSMRMP
Trigger: AGGCATTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS CCA 90 bp CATCCACTTTCTCCGTGGAGTGACTGGTGGCCACGTTTGAGGCTGTaGCGCTTGGACTTTGTTCTTGCGCGTGGACTGTGCTTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: HPLSPWSDWWPRLRL*RLDFVLARGLCFLK
Trigger: CTTCAGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGAAAGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCATGGCCTGTGCTGGCTTaGACATTCAGGAGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: AKSGERSFLRLFWQAERSWPVLA*TFRSRL
Trigger: CAGCCGGCTCCTGAATGTCAAAGCCAGCACAGGCCA...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488631.1
CDS-3UTR CAA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGATCGTTCCCGTTGAGTaGTTGCTCTCCTGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMIVPVE*LLSWGP
Trigger: CGGCCCCCAGGAGAGCAACAACTCAACGGGAACGAT...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp GTCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCTTGTTGCCACCAGAGTaGTCAAGCCAGACTTATAGC +
Preference number: 5 (lower is better)
Translates to: VTVDSEWARQVFHGSSSPLLPPE*SSQTYS
Trigger: GCTATAAGTCTGGCTTGACAACTCTGGTGGCAACAA...GGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp CAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCTTGTTGCCACCAGAGTaGTCAAGCCAGACTTATAGC +
Preference number: 5 (lower is better)
Translates to: QVFHGSSSPTSSGTGHRVLLPPE*SSQTYS
Trigger: GCTATAAGTCTGGCTTGACAACTCTGGTGGCAACAA...GACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp AGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAATGCCTGTTACACTGTaGACACTTGTTGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: RQVFHGSSSPTSSGTGHRMPVTL*TLVATR
Trigger: TCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCAT...TCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCACTGTGCTTTCTGAAGTaGGCAGATCCTCGATGCGAA +
Preference number: 5 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESLCFLK*ADPRCE
Trigger: TTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAG...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCATTTCCTTCGGTTATTTaGGCAAGCGGAGAGGTCACC +
Preference number: 5 (lower is better)
Translates to: DSEWARQVFHGSSSPTSSFPSVI*ASGEVT
Trigger: GGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA...TGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS TCA 90 bp GGCTGTGGCGCTTGGACTTTGTTCTTGCGCGTGGACTGTGCTTTCTaGAGTTGGCAGATCCTCGATGCGAATGCCTGTTACACTGTTGAC +
Preference number: 5 (lower is better)
Translates to: GCGAWTLFLRVDCAF*SWQILDANACYTVD
Trigger: GTCAACAGTGTAACAGGCATTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS GCA 90 bp CGTTTGAGGCTGTGGCGCTTGGACTTTGTTCTTGCGCGTGGACTGTaGTTTCTGAAGTTGGCAGATCCTCGATGCGAATGCCTGTTACAC +
Preference number: 5 (lower is better)
Translates to: RLRLWRLDFVLARGL*FLKLADPRCECLLH
Trigger: GTGTAACAGGCATTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS CCA 90 bp TTGTTGCCACCAGAGTTGTCAAGCCAGACTTATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACATCATCTTCGGCACCTGGCATGGCAA +
Preference number: 5 (lower is better)
Translates to: LLPPELSSQTYSGLR*FLESPHHLRHLAWQ
Trigger: TTGCCATGCCAGGTGCCGAAGATGATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATAAGTCTGGCTTGACAACTCTGGTGGCAACAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGTCCACATCGTTCCCGTaGAGTTGTTGCTCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SFLRLFWQAERSPWILSGSTSFP*SCCSPG
Trigger: CCCAGGAGAGCAACAACTCAACGGGAACGATGTGGA...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCATTGTTGCCACCAGAGTaGTCAAGCCAGACTTATAGC +
Preference number: 5 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPLLPPE*SSQTYS
Trigger: GCTATAAGTCTGGCTTGACAACTCTGGTGGCAACAA...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp AAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACAGAGTCATTGTTGCCACCAGAGTaGTCAAGCCAGACTTATAGC +
Preference number: 5 (lower is better)
Translates to: KCSTGHLLPRAQGQGTESLLPPE*SSQTYS
Trigger: GCTATAAGTCTGGCTTGACAACTCTGGTGGCAACAA...TGACTCTGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp CTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCAGGCATGCCTGTTACACTGTaGACACTTGTTGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: LRLFWQAERSPWILSGPGMPVTL*TLVATR
Trigger: TCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCAT...GCCTGGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCCAACCAGGGTCACTGTaGACAAACCATCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: VDSEWARQVFHGSSSPTSQPGSL*TNHLSQ
Trigger: TTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTTG...GCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp CCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACGAGCTCAGGGACAGGGCACATCAGCAGATCAGCAATaGCAAAATGCTGGTGCTATT +
Preference number: 5 (lower is better)
Translates to: PGKCSTGHLLPRAQGQGTSADQQ*QNAGAI
Trigger: AATAGCACCAGCATTTTGCAATTGCTGATCTGCTGA...TGTGCCCTGTCCCTGAGCTCGTGGGAGAAGATGACCCGTGGAACACTTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGCCTGCCTGGTGGCCTACTaGGGAGAAACAAAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: FPSVILASGEVTVDSEWACLVAY*GETKCL
Trigger: AAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGCA...GGCCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGTGGGGCCAGCTGGATTaGGGAACACACAGACACACT +
Preference number: 5 (lower is better)
Translates to: SFLRLFWQAERSPWILSGWGQLD*GTHRHT
Trigger: AGTGTGTCTGTGTGTTCCCAAATCCAGCTGGCCCCA...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGTGCCGGGAGGCAGAGTaGCAGACTACGTTTCACACA +
Preference number: 5 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGCREAE*QTTFHT
Trigger: TGTGTGAAACGTAGTCTGCAACTCTGCCTCCCGGCA...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGATGCCGGGAGGCAGAGTaGCAGACTACGTTTCACACA +
Preference number: 5 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRCREAE*QTTFHT
Trigger: TGTGTGAAACGTAGTCTGCAACTCTGCCTCCCGGCA...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS CCA 90 bp TCCACTTTCTCAGAGTTGTCAAGCCAGACTTATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACATCATCTTCGGCACCTGGCATGGCAA +
Preference number: 5 (lower is better)
Translates to: STFSELSSQTYSGLR*FLESPHHLRHLAWQ
Trigger: TTGCCATGCCAGGTGCCGAAGATGATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATAAGTCTGGCTTGACAACTCTGAGAAAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488631.1
CDS-3UTR CAA 90 bp AGGACCCCACAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTATCGTTCCCGTTGAGTaGTTGCTCTCCTGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: RTPQIFAVCHEDWGCLLFIVPVE*LLSWGP
Trigger: CGGCCCCCAGGAGAGCAACAACTCAACGGGAACGAT...AAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTGTGGGGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp CATCCAGCAGCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGTGTGGCGCTTGGACTTaGTTCTTGCGCGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: HPAASSASRLRYPYSRTKCGAWT*FLRVDC
Trigger: ACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACA...CTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGCTGCTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGTGTGGCGCTTGGACTTaGTTCTTGCGCGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRCGAWT*FLRVDC
Trigger: ACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACA...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGTTGAGGCTGTGGCGCTaGGACTTTGTTCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: QALGPVYDLGWTVIFHSELRLWR*DFVLAR
Trigger: ACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAA...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCACAACCAGGGTCACTGTaGACAAACCATCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPQPGSL*TNHLSQ
Trigger: TTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTTG...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGATGCCTGGTGGCCTACTaGGGAGAAACAAAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRCLVAY*GETKCL
Trigger: AAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGCA...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCAAGACAGAATGACCCCTaGGGCTCCTTTATTTTGTTC +
Preference number: 5 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPRQNDP*GSFILF
Trigger: GAACAAAATAAAGGAGCCCAAGGGGTCATTCTGTCT...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGTGCCGGGAGGCAGAGTaGCAGACTACGTTTCACACA +
Preference number: 5 (lower is better)
Translates to: QALGPVYDLGWTVIFHSECREAE*QTTFHT
Trigger: TGTGTGAAACGTAGTCTGCAACTCTGCCTCCCGGCA...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACAGCAAACTTTGCAGTaGAGAACTTTCCGAGCGGAG +
Preference number: 5 (lower is better)
Translates to: AKSGERSFLRLFWQAERSQQTLQ*RTFRAE
Trigger: CTCCGCTCGGAAAGTTCTCAACTGCAAAGTTTGCTG...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294489.10
ENST00000376057.8
CDS-3UTR CAA 90 bp GAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGATTTCCTTCGGTTATTTaGGCAAGCGGAGAGGTCACC +
Preference number: 5 (lower is better)
Translates to: EEPSLVNGLSFGYFGKRRFPSVI*ASGEVT
Trigger: GGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA...TCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TCACCGTGGATTCTGAGTGGGCCAGGCAAGTGTTCCACGGGTCATCTTCTCCCATCAGCAGATCAGCAATaGCAAAATGCTGGTGCTATT +
Preference number: 5 (lower is better)
Translates to: SPWILSGPGKCSTGHLLPSADQQ*QNAGAI
Trigger: AATAGCACCAGCATTTTGCAATTGCTGATCTGCTGA...TGGGAGAAGATGACCCGTGGAACACTTGCCTGGCCCACTCAGAATCCACGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGTGCCTGGTGGCCTACTaGGGAGAAACAAAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: QALGPVYDLGWTVIFHSECLVAY*GETKCL
Trigger: AAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGCA...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp CACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGGGGGGGACAACTGGCTCTaGGTTTCAAACACACTTGAG +
Preference number: 5 (lower is better)
Translates to: HWVQCMTWGGLLFFTVRGGDNWL*VSNTLE
Trigger: CTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCCC...CCCCCTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTG
51% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp CAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTTAAATCAGGCCCTCGGGCTCTGTTaGGCCGGCGCCAAAACGATG +
Preference number: 5 (lower is better)
Translates to: QIFAVCHEDWGCLLFLNQALGLC*AGAKTM
Trigger: CATCGTTTTGGCGCCGGCCAAACAGAGCCCGAGGGC...CTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS-3UTR CAA 90 bp TTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGCAGCAAACTTTGCAGTaGAGAACTTTCCGAGCGGAG +
Preference number: 5 (lower is better)
Translates to: LEEPSLVNGLSFGYFGKRQQTLQ*RTFRAE
Trigger: CTCCGCTCGGAAAGTTCTCAACTGCAAAGTTTGCTG...CCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294489.10
ENST00000376057.8
CDS-3UTR CAA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACGTTCCCGTTGAGTTGTaGCTCTCCTGGGGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYVPVEL*LSWGPS
Trigger: GCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAAC...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGGTTCCCGTTGAGTTGTaGCTCTCCTGGGGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVVPVEL*LSWGPS
Trigger: GCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAAC...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CAA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGTCCACATCGTTCCCGTaGAGTTGTTGCTCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKSTSFP*SCCSPG
Trigger: CCCAGGAGAGCAACAACTCAACGGGAACGATGTGGA...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCATTGTTGCCACCAGAGTaGTCAAGCCAGACTTATAGC +
Preference number: 5 (lower is better)
Translates to: AKSGERSFLRLFWQAERSLLPPE*SSQTYS
Trigger: GCTATAAGTCTGGCTTGACAACTCTGGTGGCAACAA...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TATATGGGAAGAGAAGTGCCAGGCTGGATGGTGCTGAGACAGAATGACCCCTTGATGCCTGTTACACTGTaGACACTTGTTGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: YMGREVPGWMVLRQNDPLMPVTL*TLVATR
Trigger: TCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCAT...CAAGGGGTCATTCTGTCTCAGCACCATCCAGCCTGGCACTTCTCTTCCCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGATGCCTGTTACACTGTaGACACTTGTTGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: SFLRLFWQAERSPWILSGMPVTL*TLVATR
Trigger: TCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCAT...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGCTGTGCTTTCTGAAGTaGGCAGATCCTCGATGCGAA +
Preference number: 5 (lower is better)
Translates to: QALGPVYDLGWTVIFHSELCFLK*ADPRCE
Trigger: TTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAG...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGTTGAGGCTGTGGCGCTaGGACTTTGTTCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKLRLWR*DFVLAR
Trigger: ACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAA...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp CATCCAGCAGCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGTTTCCTTCGGTTATTTaGGCAAGCGGAGAGGTCACC +
Preference number: 5 (lower is better)
Translates to: HPAASSASRLRYPYSRTKFPSVI*ASGEVT
Trigger: GGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA...CTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGCTGCTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGATCGTTCCCGTTGAGTaGTTGCTCTCCTGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVIVPVE*LLSWGP
Trigger: CGGCCCCCAGGAGAGCAACAACTCAACGGGAACGAT...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CAA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGTTGTTGCCACCAGAGTaGTCAAGCCAGACTTATAGC +
Preference number: 5 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMLLPPE*SSQTYS
Trigger: GCTATAAGTCTGGCTTGACAACTCTGGTGGCAACAA...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACAACCAGGGTCACTGTaGACAAACCATCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: AKSGERSFLRLFWQAERSQPGSL*TNHLSQ
Trigger: TTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTTG...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCAACCAGGGTCACTGTaGACAAACCATCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: GERSFLRLFWQAERSPWIQPGSL*TNHLSQ
Trigger: TTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTTG...AATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCAAGAAACAAAGTGCCTTaGAGACTATCGACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: AKSGERSFLRLFWQAERSRNKVP*RLSTSC
Trigger: GCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTCT...TGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCTGTGCTTTCTGAAGTaGGCAGATCCTCGATGCGAA +
Preference number: 5 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKLCFLK*ADPRCE
Trigger: TTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAG...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTGTGGCGCTTGGACTTaGTTCTTGCGCGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSCGAWT*FLRVDC
Trigger: ACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACA...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTTGAGGCTGTGGCGCTaGGACTTTGTTCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSLRLWR*DFVLAR
Trigger: ACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAA...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TCTTTCCTTCGGTTATTTTGGCAAGCGGAGAGGTCACCGTGGATTCTGAGTGGGTCAGCAGATCAGCAATaGCAAAATGCTGGTGCTATT +
Preference number: 5 (lower is better)
Translates to: SFLRLFWQAERSPWILSGSADQQ*QNAGAI
Trigger: AATAGCACCAGCATTTTGCAATTGCTGATCTGCTGA...CCCACTCAGAATCCACGGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GCTTCCTCGGCATCCAGGCTGAGATATCCATATTCCAGAACAAAGCAGCCAATGAGAAACAAAGTGCCTTaGAGACTATCGACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: ASSASRLRYPYSRTKQPMRNKVP*RLSTSC
Trigger: GCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTCT...CATTGGCTGCTTTGTTCTGGAATATGGATATCTCAGCCTGGATGCCGAGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp CAGGCACTGGGTCCAGTGTATGACTTGGGGTGGACTGTTATTTTTCACAGTGAGGGTCCAGTGTATGACTaGGGGTGGACTGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: QALGPVYDLGWTVIFHSEGPVYD*GWTVIF
Trigger: AAAAATAACAGTCCACCCCAAGTCATACACTGGACC...CTCACTGTGAAAAATAACAGTCCACCCCAAGTCATACACTGGACCCAGTGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp ACAAGAATGGTCAGACGGAGACACATGGTTACAGCATATAATATCGATCCAATGTCCACATCGTTCCCGTaGAGTTGTTGCTCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: TRMVRRRHMVTAYNIDPMSTSFP*SCCSPG
Trigger: CCCAGGAGAGCAACAACTCAACGGGAACGATGTGGA...CATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTCTGACCATTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGTCCACATCGTTCCCGTaGAGTTGTTGCTCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVSTSFP*SCCSPG
Trigger: CCCAGGAGAGCAACAACTCAACGGGAACGATGTGGA...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CAA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGGCTTGGACTTTGTTCTaGCGCGTGGACTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: FQQISNCKMLVLFTDVALAWTLF*RVDCAF
Trigger: GAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGC...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp ACAAGAATGGTCAGACGGAGACACATGGTTACAGCATATAATATCGATCCAATGTGTGGCGCTTGGACTTaGTTCTTGCGCGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: TRMVRRRHMVTAYNIDPMCGAWT*FLRVDC
Trigger: ACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACA...CATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTCTGACCATTCTTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGTGTGGCGCTTGGACTTaGTTCTTGCGCGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVCGAWT*FLRVDC
Trigger: ACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACA...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CAA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGTTGAGGCTGTGGCGCTaGGACTTTGTTCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVLRLWR*DFVLAR
Trigger: ACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAA...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CAA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACTGGGGCCAGCTGGATTaGGGAACACACAGACACACT +
Preference number: 5 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYWGQLD*GTHRHT
Trigger: AGTGTGTCTGTGTGTTCCCAAATCCAGCTGGCCCCA...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp GGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTTACGCTTGGACTTTGTTCTaGCGCGTGGACTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: GDTWLQHIISIQWSSVSYAWTLF*RVDCAF
Trigger: GAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGC...GTAACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGGCTTGGACTTTGTTCTaGCGCGTGGACTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVAWTLF*RVDCAF
Trigger: GAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGC...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CAA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGCAACCAGGGTCACTGTaGACAAACCATCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKQPGSL*TNHLSQ
Trigger: TTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTTG...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000488631.1
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGTTTCCTTCGGTTATTTaGGCAAGCGGAGAGGTCACC +
Preference number: 5 (lower is better)
Translates to: FQQISNCKMLVLFTDVALFPSVI*ASGEVT
Trigger: GGTGACCTCTCCGCTTGCCAAAATAACCGAAGGAAA...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTGGGGACAACTGGCTCTaGGTTTCAAACACACTTGAG +
Preference number: 5 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSGDNWL*VSNTLE
Trigger: CTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCCC...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGGGGGACAACTGGCTCTaGGTTTCAAACACACTTGAG +
Preference number: 5 (lower is better)
Translates to: FQQISNCKMLVLFTDVALGDNWL*VSNTLE
Trigger: CTCAAGTGTGTTTGAAACCAAGAGCCAGTTGTCCCC...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGAGACAGAATGACCCCTaGGGCTCCTTTATTTTGTTC +
Preference number: 5 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKRQNDP*GSFILF
Trigger: GAACAAAATAAAGGAGCCCAAGGGGTCATTCTGTCT...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGTGGGGCCAGCTGGATTaGGGAACACACAGACACACT +
Preference number: 5 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRWGQLD*GTHRHT
Trigger: AGTGTGTCTGTGTGTTCCCAAATCCAGCTGGCCCCA...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TGTTTAGAGGAGCCAAGTCTGGTGAACGGTCTTTCCTTCGGTTATTTTGGCAAGTCCACTTTCTCAGAGTaGTCAAGCCAGACTTATAGC +
Preference number: 5 (lower is better)
Translates to: CLEEPSLVNGLSFGYFGKSTFSE*SSQTYS
Trigger: GCTATAAGTCTGGCTTGACAACTCTGAGAAAGTGGA...CTTGCCAAAATAACCGAAGGAAAGACCGTTCACCAGACTTGGCTCCTCTAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488631.1
CDS-3UTR CAA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGATGCCTGTTACACTGTaGACACTTGTTGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: FQQISNCKMLVLFTDVALMPVTL*TLVATR
Trigger: TCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCAT...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGCTGTGCTTTCTGAAGTaGGCAGATCCTCGATGCGAA +
Preference number: 5 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVLCFLK*ADPRCE
Trigger: TTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAG...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CAA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACTGCCTGGTGGCCTACTaGGGAGAAACAAAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDCLVAY*GETKCL
Trigger: AAGGCACTTTGTTTCTCCCAAGTAGGCCACCAGGCA...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CAA 90 bp CAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTTAAATCAGGCCGGACAGCAAACTTaGCAGTTGAGAACTTTCCGA +
Preference number: 5 (lower is better)
Translates to: QIFAVCHEDWGCLLFLNQAGQQT*QLRTFR
Trigger: TCGGAAAGTTCTCAACTGCAAAGTTTGCTGTCCGGC...CTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294489.10
ENST00000376057.8
CDS-3UTR CAA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGTTGTTGCCACCAGAGTaGTCAAGCCAGACTTATAGC +
Preference number: 5 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVLLPPE*SSQTYS
Trigger: GCTATAAGTCTGGCTTGACAACTCTGGTGGCAACAA...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CAA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGATGCCTGTTACACTGTaGACACTTGTTGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVMPVTL*TLVATR
Trigger: TCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCAT...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CAA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACCTGTGCTTTCTGAAGTaGGCAGATCCTCGATGCGAA +
Preference number: 5 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDLCFLK*ADPRCE
Trigger: TTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAG...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGCTGTGCTTTCTGAAGTaGGCAGATCCTCGATGCGAA +
Preference number: 5 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRLCFLK*ADPRCE
Trigger: TTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAG...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTCAACCAGGGTCACTGTaGACAAACCATCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSQPGSL*TNHLSQ
Trigger: TTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTTG...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp GACGGAGACACATGGTTACAGCATATAATATCGATCCAATGGTCCAGTGTTAGTAGAAACAAAGTGCCTTaGAGACTATCGACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: DGDTWLQHIISIQWSSVSRNKVP*RLSTSC
Trigger: GCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTCT...ACTAACACTGGACCATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000621990.5
CDS-3UTR CAA 90 bp TTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACGTAGCACTGGGTCCAGTGTATGACTaGGGGTGGACTGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: FQQISNCKMLVLFTDVALGPVYD*GWTVIF
Trigger: AAAAATAACAGTCCACCCCAAGTCATACACTGGACC...CAGTGCTACGTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACCATGTCTACACTGCATaGAGCACCAACACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDHVYTA*STNTGV
Trigger: CACACCTGTGTTGGTGCTCAATGCAGTGTAGACATG...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp ACCACGTGTTATCCAAGTTTAGATTTCCTAGTTGATTATTCACACCAGATCAGGATGCCTGTTACACTGTaGACACTTGTTGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: TTCYPSLDFLVDYSHQIRMPVTL*TLVATR
Trigger: TCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCAT...CCTGATCTGGTGTGAATAATCAACTAGGAAATCTAAACTTGGATAACACGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp TTCAAAGATTTGAGTTCTAGACACGATGGCTTTCATTTGCCTATCACATGGGTGCAACCAGGGTCACTGTaGACAAACCATCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: FKDLSSRHDGFHLPITWVQPGSL*TNHLSQ
Trigger: TTGAGAAAGATGGTTTGTCAACAGTGACCCTGGTTG...CACCCATGTGATAGGCAAATGAAAGCCATCGTGTCTAGAACTCAAATCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510906.5
CDS-3UTR CAA 90 bp ACAAGAATGGTCAGACGGAGACACATGGTTACAGCATATAATATCGATCCAATGTCAGCAGATCAGCAATaGCAAAATGCTGGTGCTATT +
Preference number: 5 (lower is better)
Translates to: TRMVRRRHMVTAYNIDPMSADQQ*QNAGAI
Trigger: AATAGCACCAGCATTTTGCAATTGCTGATCTGCTGA...CATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTCTGACCATTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000513143.5
ENST00000621990.5
CDS-3UTR CAA 90 bp CAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTTAAATCAGAGAAACAAAGTGCCTTaGAGACTATCGACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: QIFAVCHEDWGCLLFLNQRNKVP*RLSTSC
Trigger: GCAGGAAGTCGATAGTCTCAAAGGCACTTTGTTTCT...CTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp ATGTGTACATTTCAGCAGATCAGCAATTGCAAAATGCTGGTGCTATTTACTGACAGACAGAATGACCCCTaGGGCTCCTTTATTTTGTTC +
Preference number: 5 (lower is better)
Translates to: MCTFQQISNCKMLVLFTDRQNDP*GSFILF
Trigger: GAACAAAATAAAGGAGCCCAAGGGGTCATTCTGTCT...GTCAGTAAATAGCACCAGCATTTTGCAATTGCTGATCTGCTGAAATGTACACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp CAGATATTTGCGGTATGTCATGAGGACTGGGGATGTCTTCTATTTTTAAATCAGGGTCCAGTGTATGACTaGGGGTGGACTGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: QIFAVCHEDWGCLLFLNQGPVYD*GWTVIF
Trigger: AAAAATAACAGTCCACCCCAAGTCATACACTGGACC...CTGATTTAAAAATAGAAGACATCCCCAGTCCTCATGACATACCGCAAATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000621990.5
CDS-3UTR CAA 90 bp ACAAGAATGGTCAGACGGAGACACATGGTTACAGCATATAATATCGATCCAATGAAGTCTATGTTTTTCTaGTTATGGGCAGAAGTGAGA +
Preference number: 5 (lower is better)
Translates to: TRMVRRRHMVTAYNIDPMKSMFF*LWAEVR
Trigger: TCTCACTTCTGCCCATAACAAGAAAAACATAGACTT...CATTGGATCGATATTATATGCTGTAACCATGTGTCTCCGTCTGACCATTCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS CAA 72 bp CCGTCCGGGCGCGCTAGGCCCGCCCTCGGGCTCTGTTaGGCCGGCGCCAAAACGATGATCTCAGGCCAGGTT +
Preference number: 6 (lower is better)
Translates to: PSGRARPALGLC*AGAKTMISGQV
Trigger: AACCTGGCCTGAGATCATCGTTTTGGCGCCGGCCAAACAGAGCCCGAGGGCGGGCCTAGCGCGCCCGGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS GCA 72 bp GCTCGAATACCAGGCCCGGGCATTCCAGCAAGTCTCTaGTCGCTCGTCCCCATCAGCGACGGCAGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: ARIPGPGIPASL*SLVPISDGRKP
Trigger: TGGCTTCCTGCCGTCGCTGATGGGGACGAGCGAGCAGAGACTTGCTGGAATGCCCGGGCCTGGTATTCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509009.5
CDS TCA 72 bp CCGCCCTCGGGCTCTGTTTGGCCGGCGCCAAAACGATaGTCTCAGGCCAGGTTTAAAGTTACAGGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: PPSGSVWPAPKR*SQARFKVTGPQ
Trigger: CTGCGGCCCTGTAACTTTAAACCTGGCCTGAGATCATCGTTTTGGCGCCGGCCAAACAGAGCCCGAGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294489.10
CDS CCA 72 bp TCTCCGTGGAGTGACTGGTGGCCACGTTTGAGGCTGTaGCGCTTGGACTTTGTTCTTGCGCGTGGACTGTGC +
Preference number: 6 (lower is better)
Translates to: SPWSDWWPRLRL*RLDFVLARGLC
Trigger: GCACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS CCA 72 bp GCTGGTTCCTGGAGTCACCACATCATCTTCGGCACCTaGCATGGCAACGCCGCCTTCCAAACCTGTAGTCTC +
Preference number: 6 (lower is better)
Translates to: AGSWSHHIIFGT*HGNAAFQTCSL
Trigger: GAGACTACAGGTTTGGAAGGCGGCGTTGCCATGCCAGGTGCCGAAGATGATGTGGTGACTCCAGGAACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000488631.1
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS CAA 72 bp CGAAGAGCAGAGCTGACACCTTCCACATCGTTCCCGTaGAGTTGTTGCTCTCCTGGGGGCCGAGCAGCAAGA +
Preference number: 6 (lower is better)
Translates to: RRAELTPSTSFP*SCCSPGGRAAR
Trigger: TCTTGCTGCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAACGATGTGGAAGGTGTCAGCTCTGCTCTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000506205.1
ENST00000510906.5
ENST00000621990.5
CDS CAA 90 bp ACGAAGAGCAGAGCTGACACCTTCCACATCGTTCCCGTTGAGTTGTaGCTCTCCTGGGGGCCGAGCAGCAAGATTCTGAGCTGGGGGAAA +
Preference number: 6 (lower is better)
Translates to: TKSRADTFHIVPVEL*LSWGPSSKILSWGK
Trigger: TTTCCCCCAGCTCAGAATCTTGCTGCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAACGATGTGGAAGGTGTCAGCTCTGCTCTTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000506205.1
ENST00000510906.5
ENST00000621990.5
CDS CAA 90 bp AAAACGAAGAGCAGAGCTGACACCTTCCACATCGTTCCCGTTGAGTaGTTGCTCTCCTGGGGGCCGAGCAGCAAGATTCTGAGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: KTKSRADTFHIVPVE*LLSWGPSSKILSWG
Trigger: CCCCCAGCTCAGAATCTTGCTGCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAACGATGTGGAAGGTGTCAGCTCTGCTCTTCGTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000506205.1
ENST00000510906.5
ENST00000621990.5
CDS TCA 72 bp ATCCACTTTCTCCGTGGAGTGACTGGTGGCCACGTTTaGGGCTGTGGCGCTTGGACTTTGTTCTTGCGCGTG +
Preference number: 6 (lower is better)
Translates to: IHFLRGVTGGHV*GCGAWTLFLRV
Trigger: CACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGAAAGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS CCA 72 bp ACCTTCCACATCGTTCCCGTTGAGTTGTTGCTCTCCTaGGGGCCGAGCAGCAAGATTCTGAGCTGGGGGAAA +
Preference number: 6 (lower is better)
Translates to: TFHIVPVELLLS*GPSSKILSWGK
Trigger: TTTCCCCCAGCTCAGAATCTTGCTGCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAACGATGTGGAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000506205.1
ENST00000510906.5
ENST00000621990.5
CDS CAA 72 bp AGAGCTGACACCTTCCACATCGTTCCCGTTGAGTTGTaGCTCTCCTGGGGGCCGAGCAGCAAGATTCTGAGC +
Preference number: 6 (lower is better)
Translates to: RADTFHIVPVEL*LSWGPSSKILS
Trigger: GCTCAGAATCTTGCTGCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAACGATGTGGAAGGTGTCAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000506205.1
ENST00000510906.5
ENST00000621990.5
CDS CAA 72 bp AGCAGAGCTGACACCTTCCACATCGTTCCCGTTGAGTaGTTGCTCTCCTGGGGGCCGAGCAGCAAGATTCTG +
Preference number: 6 (lower is better)
Translates to: SRADTFHIVPVE*LLSWGPSSKIL
Trigger: CAGAATCTTGCTGCTCGGCCCCCAGGAGAGCAACAACTCAACGGGAACGATGTGGAAGGTGTCAGCTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000506205.1
ENST00000510906.5
ENST00000621990.5
CDS CAA 72 bp TGGAGTGACTGGTGGCCACGTTTGAGGCTGTGGCGCTaGGACTTTGTTCTTGCGCGTGGACTGTGCTTTCTG +
Preference number: 6 (lower is better)
Translates to: WSDWWPRLRLWR*DFVLARGLCFL
Trigger: CAGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGTCACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS CAA 72 bp CATCCACTTTCTCCGTGGAGTGACTGGTGGCCACGTTaGAGGCTGTGGCGCTTGGACTTTGTTCTTGCGCGT +
Preference number: 6 (lower is better)
Translates to: HPLSPWSDWWPR*RLWRLDFVLAR
Trigger: ACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGAAAGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS CAA 90 bp CTTTCTCCGTGGAGTGACTGGTGGCCACGTTTGAGGCTGTGGCGCTaGGACTTTGTTCTTGCGCGTGGACTGTGCTTTCTGAAGTTGGCA +
Preference number: 6 (lower is better)
Translates to: LSPWSDWWPRLRLWR*DFVLARGLCFLKLA
Trigger: TGCCAACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGGCCACCAGTCACTCCACGGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS GCA 72 bp GCCACGTTTGAGGCTGTGGCGCTTGGACTTTGTTCTTaGGCGTGGACTGTGCTTTCTGAAGTTGGCAGATCC +
Preference number: 6 (lower is better)
Translates to: ATFEAVALGLCS*AWTVLSEVGRS
Trigger: GGATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACAGCCTCAAACGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS GCA 72 bp CTGTGGCGCTTGGACTTTGTTCTTGCGCGTGGACTGTaGTTTCTGAAGTTGGCAGATCCTCGATGCGAATGC +
Preference number: 6 (lower is better)
Translates to: LWRLDFVLARGL*FLKLADPRCEC
Trigger: GCATTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAGTCCAAGCGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS CCA 72 bp CCAGAGTTGTCAAGCCAGACTTATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACATCATCTTCGGCACCTG +
Preference number: 6 (lower is better)
Translates to: PELSSQTYSGLR*FLESPHHLRHL
Trigger: CAGGTGCCGAAGATGATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATAAGTCTGGCTTGACAACTCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS TCA 72 bp CCAGACCCTAGGCAGCCGGACAGCAAACTTTGCAGTTaGGAACTTTCCGAGCGGAGTCAGCATTTATCTCTC +
Preference number: 6 (lower is better)
Translates to: PDPRQPDSKLCS*ELSERSQHLSL
Trigger: GAGAGATAAATGCTGACTCCGCTCGGAAAGTTCTCAACTGCAAAGTTTGCTGTCCGGCTGCCTAGGGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294489.10
ENST00000376057.8
CDS CCA 72 bp TCAGAGTTGTCAAGCCAGACTTATAGCGGTCTTCGCTaGTTCCTGGAGTCACCACATCATCTTCGGCACCTG +
Preference number: 6 (lower is better)
Translates to: SELSSQTYSGLR*FLESPHHLRHL
Trigger: CAGGTGCCGAAGATGATGTGGTGACTCCAGGAACCAGCGAAGACCGCTATAAGTCTGGCTTGACAACTCTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488631.1
CDS CAA 72 bp GTTGGCAGATCCTCGATGCGAATGCCTGTTACACTGTaGACACTTGTTGCCACCAGAGTTGTCAAGCCAGAC +
Preference number: 6 (lower is better)
Translates to: VGRSSMRMPVTL*TLVATRVVKPD
Trigger: GTCTGGCTTGACAACTCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCATTCGCATCGAGGATCTGCCAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS TCA 72 bp TTGGCAGATCCTCGATGCGAATGCCTGTTACACTGTTaGCACTTGTTGCCACCAGAGTTGTCAAGCCAGACT +
Preference number: 6 (lower is better)
Translates to: LADPRCECLLHC*HLLPPELSSQT
Trigger: AGTCTGGCTTGACAACTCTGGTGGCAACAAGTGTCAACAGTGTAACAGGCATTCGCATCGAGGATCTGCCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5
CDS CAA 72 bp GACTTTGTTCTTGCGCGTGGACTGTGCTTTCTGAAGTaGGCAGATCCTCGATGCGAATGCCTGTTACACTGT +
Preference number: 6 (lower is better)
Translates to: DFVLARGLCFLK*ADPRCECLLHC
Trigger: ACAGTGTAACAGGCATTCGCATCGAGGATCTGCCAACTTCAGAAAGCACAGTCCACGCGCAAGAACAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294489.10
ENST00000376057.8
ENST00000376061.8
ENST00000475043.5
ENST00000487038.5
ENST00000509009.5
ENST00000510906.5
ENST00000513143.5
ENST00000621990.5