RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164951

Ensembl transcript IDs: ENST00000297598.5, ENST00000396200.3, ENST00000517764.1, ENST00000518107.5, ENST00000518573.1, ENST00000518827.1, ENST00000520614.1, ENST00000520728.5, ENST00000521144.1, ENST00000523021.1

Found 488 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAATCTaGGCTAGGCAGGACCAGACTCTCCTGACCCTGCCACCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: CDKEVTCFKCRCHEI*ARQDQTLLTLPPCC
Trigger: GCAGCAGGGTGGCAGGGTCAGGAGAGTCTGGTCCTGCCTAGCTCAGATTTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
3UTR GCA 90 bp AGTACGATTCCCCGGCAGCAGTCTACCCACCACACACTTACGGCATaGCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTA +
Preference number: 1 (lower is better)
Translates to: STIPRQQSTHHTLTA*QAFGDYIRVMCWWL
Trigger: TAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTGGTGGGTAGACTGCTGCCGGGGAATCGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR GCA 90 bp ACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTaGTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: TLTACQAFGDYIRVM*WWLQMTIIEEISLF
Trigger: GAAGAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR GCA 90 bp AATCACAGCCTTAACAGTGATGCTAGAATAAGTGATGACAATATGTaGACAGCTGTATACAGATCACTATTAAACACAGGAACAAAATGC +
Preference number: 1 (lower is better)
Translates to: NHSLNSDARISDDNM*TAVYRSLLNTGTKC
Trigger: GCATTTTGTTCCTGTGTTTAATAGTGATCTGTATACAGCTGTGCACATATTGTCATCACTTATTCTAGCATCACTGTTAAGGCTGTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR GCA 90 bp TTCATGCTGCATTTTCATTTCTATAGAGCAGACAAGCTTCCAGACTaGAGACCAAGTTTCTTGTGTAATAATACTACTATCTTGATCATG +
Preference number: 1 (lower is better)
Translates to: FMLHFHFYRADKLPD*RPSFLCNNTTILIM
Trigger: CATGATCAAGATAGTAGTATTATTACACAAGAAACTTGGTCTGCAGTCTGGAAGCTTGTCTGCTCTATAGAAATGAAAATGCAGCATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR-3UTR TCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATCCTGTGATAAAGAAGTaGCTTGCTTCAAGTGCAGGT +
Preference number: 2 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDPVIKK*LASSAG
Trigger: ACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGG...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACTGACCCTGCCACCCTaGTGCAAAGTCAATTTGGAG +
Preference number: 2 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHELTLPP*CKVNLE
Trigger: CTCCAAATTGACTTTGCAGCAGGGTGGCAGGGTCAG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
3UTR-3UTR GCA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCCTGACCCTGCCACCCTaGTGCAAAGTCAATTTGGAG +
Preference number: 2 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLLTLPP*CKVNLE
Trigger: CTCCAAATTGACTTTGCAGCAGGGTGGCAGGGTCAG...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR-3UTR TCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATTCAATTTGGAGTACCTaGCTAGCTAGAGTATCAAAA +
Preference number: 2 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDSIWST*LARVSK
Trigger: TTTTGATACTCTAGCTAGTCAGGTACTCCAAATTGA...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAATCTaGGCTAGGCAGGACCAGACT +
Preference number: 2 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCRCHEI*ARQDQT
Trigger: AGTCTGGTCCTGCCTAGCTCAGATTTCATGGCACCT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
3UTR-3UTR GCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACCTGACCCTGCCACCCTaGTGCAAAGTCAATTTGGAG +
Preference number: 2 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHLTLPP*CKVNLE
Trigger: CTCCAAATTGACTTTGCAGCAGGGTGGCAGGGTCAG...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
3UTR-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCCTGACCCTGCCACCCTaGTGCAAAGTCAATTTGGAG +
Preference number: 2 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCLTLPP*CKVNLE
Trigger: CTCCAAATTGACTTTGCAGCAGGGTGGCAGGGTCAG...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
3UTR-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAATCAATTTGGAGTACCTaGCTAGCTAGAGTATCAAAA +
Preference number: 2 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHESIWST*LARVSK
Trigger: TTTTGATACTCTAGCTAGTCAGGTACTCCAAATTGA...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
3UTR-3UTR GCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTGATAAAGAAGTGACTTaGTTCAAGTGCAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCDKEVT*FKCRCH
Trigger: ATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATC...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
3UTR-3UTR TCA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGATCAATTTGGAGTACCTaGCTAGCTAGAGTATCAAAA +
Preference number: 2 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARSIWST*LARVSK
Trigger: TTTTGATACTCTAGCTAGTCAGGTACTCCAAATTGA...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
3UTR-3UTR TCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTCCTGTGATAAAGAAGTaGCTTGCTTCAAGTGCAGGT +
Preference number: 2 (lower is better)
Translates to: HAINICSHVHWNLSEERCPVIKK*LASSAG
Trigger: ACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGG...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
3UTR CAA 90 bp TTCTTCACTTTAACCAAGAGACTACACACAGCAAGATACTTGCTTTaGGCCTATTCAAGATCTTATTTGCCAGGTCATCCTAATTTTCTC +
Preference number: 2 (lower is better)
Translates to: FFTLTKRLHTARYLL*AYSRSYLPGHPNFL
Trigger: GAGAAAATTAGGATGACCTGGCAAATAAGATCTTGAATAGGCCAAAAGCAAGTATCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
3UTR-3UTR TCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGTCCAGAAGGAGTTCTTaGACATCTAGTTCATATCCC +
Preference number: 2 (lower is better)
Translates to: LSLFSIETNSAANSTLIQSRRSS*TSSSYP
Trigger: GGGATATGAACTAGATGTTCAAGAACTCCTTCTGGA...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR-3UTR GCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAACACAGCAAGATACTTaGTTTTGGCCTATTCAAGAT +
Preference number: 2 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRTQQDT*FWPIQD
Trigger: ATCTTGAATAGGCCAAAAGCAAGTATCTTGCTGTGT...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
3UTR CAA 90 bp CTTCCAGACTGCAGACCAAGTTTCTTGTGTAATAATACTACTATCTaGATCATGACCACAGGAAACCAATTTTATATTCCCTGTACTATA +
Preference number: 2 (lower is better)
Translates to: LPDCRPSFLCNNTTI*IMTTGNQFYIPCTI
Trigger: TATAGTACAGGGAATATAAAATTGGTTTCCTGTGGTCATGATCAAGATAGTAGTATTATTACACAAGAAACTTGGTCTGCAGTCTGGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR-3UTR TCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTCAATTTGGAGTACCTaGCTAGCTAGAGTATCAAAA +
Preference number: 2 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNSIWST*LARVSK
Trigger: TTTTGATACTCTAGCTAGTCAGGTACTCCAAATTGA...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
3UTR GCA 72 bp CCCCGGCAGCAGTCTACCCACCACACACTTACGGCATaGCAAGCCTTTGGGGATTACATAAGAGTGATGTGC +
Preference number: 3 (lower is better)
Translates to: PRQQSTHHTLTA*QAFGDYIRVMC
Trigger: GCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTGGTGGGTAGACTGCTGCCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR TCA 72 bp GAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAATCTaGGCTAGGCAGGACCAGACTCTCCTGACCCTGCCA +
Preference number: 3 (lower is better)
Translates to: EVTCFKCRCHEI*ARQDQTLLTLP
Trigger: TGGCAGGGTCAGGAGAGTCTGGTCCTGCCTAGCTCAGATTTCATGGCACCTGCACTTGAAGCAAGTCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
3UTR-3UTR CAA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGCACACAGCAAGATACTaGCTTTTGGCCTATTCAAGA +
Preference number: 3 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWHTARY*LLAYSR
Trigger: TCTTGAATAGGCCAAAAGCAAGTATCTTGCTGTGTG...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR GCA 72 bp GCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTaGTGGTGGCTACAGATGACAATAATTGAAGAGATC +
Preference number: 3 (lower is better)
Translates to: ACQAFGDYIRVM*WWLQMTIIEEI
Trigger: GATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR CCA 72 bp CAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTaGCTACAGATGACAATAATTGAAGAGATCAGTCTC +
Preference number: 3 (lower is better)
Translates to: QAFGDYIRVMCW*LQMTIIEEISL
Trigger: GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR CCA 72 bp TGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTaGTGGCTACAGATGACAATAATTGAAGAGATCAGT +
Preference number: 3 (lower is better)
Translates to: CQAFGDYIRVMC*WLQMTIIEEIS
Trigger: ACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR-3UTR CAA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCCAGATTGCTTGGATCTaGGTCATTTATGGCTTGAAG +
Preference number: 3 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLQIAWI*VIYGLK
Trigger: CTTCAAGCCATAAATGACCAAGATCCAAGCAATCTG...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR-3UTR CAA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAACACACAGCAAGATACTaGCTTTTGGCCTATTCAAGA +
Preference number: 3 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKHTARY*LLAYSR
Trigger: TCTTGAATAGGCCAAAAGCAAGTATCTTGCTGTGTG...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
3UTR TCA 72 bp TTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTaGTTCAGTATCCACAGTCCAGAAGGAGTTCTTGAA +
Preference number: 3 (lower is better)
Translates to: FQLKQILQPIVH*FSIHSPEGVLE
Trigger: TTCAAGAACTCCTTCTGGACTGTGGATACTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR-3UTR CAA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATGACTGCTGCAAACATTaGATGCCACTAAGTATTCTA +
Preference number: 3 (lower is better)
Translates to: HNGKLILACIKIQVNIKHDCCKH*MPLSIL
Trigger: TAGAATACTTAGTGGCATCAAATGTTTGCAGCAGTC...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR-3UTR CAA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGCAAGATACTTGCTTTaGGCCTATTCAAGATCTTAT +
Preference number: 3 (lower is better)
Translates to: HAINICSHVHWNLSEERCARYLL*AYSRSY
Trigger: ATAAGATCTTGAATAGGCCAAAAGCAAGTATCTTGC...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
3UTR-3UTR CAA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGGCAAGATACTTGCTTTaGGCCTATTCAAGATCTTAT +
Preference number: 3 (lower is better)
Translates to: INICSHVHWNLSEERCEQARYLL*AYSRSY
Trigger: ATAAGATCTTGAATAGGCCAAAAGCAAGTATCTTGC...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
3UTR CCA 72 bp AAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATaGCTTGAAGAACTGGATTTGAAAACCACTTTAGGC +
Preference number: 3 (lower is better)
Translates to: KTNSDCLDLGHL*LEELDLKTTLG
Trigger: GCCTAAAGTGGTTTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATTGTGCCACTGGAGAATaGGTAGCAGTGCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDCATGE*VAVPGR
Trigger: GCGGCCGGGCACTGCTACCCATTCTCCAGTGGCACA...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGCCCCCTCACAACTTTaGACGGGTGGAGGATCCCGG +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDAPSQL*TGGGSR
Trigger: CCGGGATCCTCCACCCGTCCAAAGTTGTGAGGGGGC...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396200.3
CDS-3UTR GCA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCCCCTCACCCCCGGCCTaGCCACTCTGCTCCCCTACC +
Preference number: 4 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLPSPPA*PLCSPT
Trigger: GGTAGGGGAGCAGAGTGGGCAGGCCGGGGGTGAGGG...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297598.5
CDS-3UTR GCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACCCCTCACCCCCGGCCTaGCCACTCTGCTCCCCTACC +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHPSPPA*PLCSPT
Trigger: GGTAGGGGAGCAGAGTGGGCAGGCCGGGGGTGAGGG...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000520728.5
CDS-3UTR GCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACTTCCACGCAGCCCCGTaGAGCTCCCGGAGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHFHAAP*SSRSAS
Trigger: GCTCGCGCTCCGGGAGCTGCACGGGGCTGCGTGGAA...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGCCTGCACACCCAGCATaGCTCTGCTATCGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWPAHPA*LCYRQY
Trigger: ATACTGGCGATAGCAGAGCCATGCTGGGTGTGCAGG...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAATGTGCCACTGGAGAATaGGTAGCAGTGCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHECATGE*VAVPGR
Trigger: GCGGCCGGGCACTGCTACCCATTCTCCAGTGGCACA...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGCCACCAACAGCTATTaGCTGTTGGTGATGCATGCC +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDATNSY*LLVMHA
Trigger: GGCATGCATCACCAACAGCCAATAGCTGTTGGTGGC...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGGCCACCAACAGCTATTaGCTGTTGGTGATGCATGCC +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWATNSY*LLVMHA
Trigger: GGCATGCATCACCAACAGCCAATAGCTGTTGGTGGC...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGAGGACGGGGCGGCTCGTaGCAGGGAGTAGGGAATACG +
Preference number: 4 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARGRGGS*QGVGNT
Trigger: CGTATTCCCTACTCCCTGCCACGAGCCGCCCCGTCC...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396200.3
CDS-3UTR TCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGCCAGTATTGGCCACATaGAGGTCAACACCATCCACA +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWPVLAT*RSTPST
Trigger: TGTGGATGGTGTTGACCTTCATGTGGCCAATACTGG...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGCTATTGGCTGTTGGTaGTGCATGCCAGTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDAIGCW*CMPVRY
Trigger: GTACCTAACTGGCATGCATCACCAACAGCCAATAGC...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTTCCACGCAGCCCCGTaGAGCTCCCGGAGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNFHAAP*SSRSAS
Trigger: GCTCGCGCTCCGGGAGCTGCACGGGGCTGCGTGGAA...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGAGCCGTCCTCTTCCTaGACACCCAGCATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEEPSSS*TPSMAL
Trigger: CAGAGCCATGCTGGGTGTGCAGGAAGAGGACGGCTC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGGCTGTTGGTGATGCATaGCAGTTAGGTACTCACCCA +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWAVGDA*QLGTHP
Trigger: TGGGTGAGTACCTAACTGGCATGCATCACCAACAGC...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGCTGGAACTTCTGACTaGGATTCCGGGCACGGCAGG +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEAGTSD*DSGHGR
Trigger: CCTGCCGTGCCCGGAATCCCAGTCAGAAGTTCCAGC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297598.5
CDS-3UTR CCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGCTTTCACTGACTGCCTaGGAACAAGCACAACCTGCA +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWLSLTA*EQAQPA
Trigger: TGCAGGTTGTGCTTGTTCCCAGGCAGTCAGTGAAAG...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGCAGGCTGGAACTTCTaGCTGGGATTCCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCAGWNF*LGFRAR
Trigger: CCGTGCCCGGAATCCCAGTCAGAAGTTCCAGCCTGC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297598.5
CDS-3UTR TCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATAAAAGAGTCTTTCACTaGCTGCCTGGGAACAAGCAC +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDKRVFH*LPGNKH
Trigger: GTGCTTGTTCCCAGGCAGTCAGTGAAAGACTCTTTT...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACCACAGCGTGGCGAATaGGATGGGTTGCTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEPQRGE*DGLLRS
Trigger: AGAACGCAGCAACCCATCTCATTCGCCACGCTGTGG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGGTCTGCAAGCAGGTTaGTGCACTTCTCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEGLQAG*CTSPVL
Trigger: GAGGACCGGAGAAGTGCAGCAACCTGCTTGCAGACC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATTTAGGATCACCAACTTaGGCCTCCAAGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDLGSPT*ASKEMS
Trigger: TGACATCTCCTTGGAGGCGCAAGTTGGTGATCCTAA...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATTCTGTTAAAAGGCCATaGATCTGTCCCAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDSVKRP*ICPRVT
Trigger: GGTGACTCTGGGACAGATGCATGGCCTTTTAACAGA...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGCGAATGAGATGGGTTaGTGCGTTCTGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDANEMG*CVLILK
Trigger: TTTGAGGATCAGAACGCAGCAACCCATCTCATTCGC...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTGTGCCACTGGAGAATaGGTAGCAGTGCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCCATGE*VAVPGR
Trigger: GCGGCCGGGCACTGCTACCCATTCTCCAGTGGCACA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACTGTGCCACTGGAGAATaGGTAGCAGTGCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHCATGE*VAVPGR
Trigger: GCGGCCGGGCACTGCTACCCATTCTCCAGTGGCACA...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGCTATCGCCAGTATTaGCCACATGAAGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWCYRQY*PHEGQH
Trigger: GTGTTGACCTTCATGTGGCCAATACTGGCGATAGCA...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATCTTGGCCTCACTCTTTaGATGTTCCAATTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDLGLTL*MFQFQP
Trigger: CGGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAG...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGGTGGTAAGTTACCTCTaGCTCAGCAGTGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWVVSYL*LSSEIR
Trigger: CCTTATCTCACTGCTGAGCCAGAGGTAACTTACCAC...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGACCACAGCGTGGCGAATaGGATGGGTTGCTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARPQRGE*DGLLRS
Trigger: AGAACGCAGCAACCCATCTCATTCGCCACGCTGTGG...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGCAGCCAATAGTACACTaGTTCAGTATCCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWQPIVH*FSIHSP
Trigger: TGGACTGTGGATACTGAATCAGTGTACTATTGGCTG...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACACCCAGCATGGCTCTaGTATCGCCAGTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEHPAWL*YRQYWP
Trigger: TGGCCAATACTGGCGATAGCAGAGCCATGCTGGGTG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGAGCCGTCCTCTTCCTaGACACCCAGCATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCEPSSS*TPSMAL
Trigger: CAGAGCCATGCTGGGTGTGCAGGAAGAGGACGGCTC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGAGGGTGCTTGTGCCACTaGAGAATGGGTAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARGCLCH*RMGSSA
Trigger: GGCACTGCTACCCATTCTCCAGTGGCACAAGCACCC...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGGATTCCAATTCGTCTaGGCCCGGGACACACACACA +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEGFQFV*ARDTHT
Trigger: TGTGTGTGTGTCCCGGGCCCAGACGAATTGGAATCC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAATGGGTTGCTGCGTTCTaGTCCTCAAATACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEWVAAF*SSNTED
Trigger: GTCCTCGGTATTTGAGGATCAGAACGCAGCAACCCA...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATTTTGAGAATTGCCAGTaGAAGAGCCACTCACTATTC +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDFENCQ*KSHSLF
Trigger: GAATAGTGAGTGGCTCTTTCACTGGCAATTCTCAAA...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAGGTGCCATGAAATCTaGGCTAGGCAGGACCAGACT +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHERCHEI*ARQDQT
Trigger: AGTCTGGTCCTGCCTAGCTCAGATTTCATGGCACCT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGCAGCACCGGCCCATTaGAAGCAAGGCAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCAAPAH*KQGRDA
Trigger: AGCATCTCTGCCTTGCTTTCAATGGGCCGGTGCTGC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517764.1
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACTTCCTTGGGTGTACTaGCACCAGTTCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHELPWVY*HQFSFG
Trigger: GCCAAAGGAGAACTGGTGGCAGTACACCCAAGGAAG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACGGTCTGCAAGCAGGTTaGTGCACTTCTCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHGLQAG*CTSPVL
Trigger: GAGGACCGGAGAAGTGCAGCAACCTGCTTGCAGACC...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAGCATCCCTCTGGTCTaGAAGCAGGTTGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHESIPLV*KQVAAL
Trigger: AAGTGCAGCAACCTGCTTGCAGACCAGAGGGATGCT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATAATGAGATGGGTTGCTaGGTTCTGATCCTCAAATAC +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDNEMGC*VLILKY
Trigger: GTATTTGAGGATCAGAACGCAGCAACCCATCTCATT...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATTACATAAGAGTGATGTaGTGGTGGCTACAGATGACA +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDYIRVM*WWLQMT
Trigger: TGTCATCTGTAGCCACCAGCACATCACTCTTATGTA...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAAAGCAAGGCAGAGATaGTCATTAGAGGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEKARQR*SLEEAA
Trigger: CGCCGCCTCCTCTAATGAGCATCTCTGCCTTGCTTT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517764.1
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGAGTTGGTGCTGGCATaGCATCAGAGAACAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEELVLA*HQRTVA
Trigger: TGCCACTGTTCTCTGATGCCATGCCAGCACCAACTC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGGGTGCTTGTGCCACTaGAGAATGGGTAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCGCLCH*RMGSSA
Trigger: GGCACTGCTACCCATTCTCCAGTGGCACAAGCACCC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAATCAACACCATCCACATaGGCCACACAAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHESTPST*ATQAVA
Trigger: AGCCACTGCTTGTGTGGCCCATGTGGATGGTGTTGA...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGACCTGCACACCCAGCATaGCTCTGCTATCGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARPAHPA*LCYRQY
Trigger: ATACTGGCGATAGCAGAGCCATGCTGGGTGTGCAGG...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTCATTGTCATTCAACTaGTCTGGGCCAGATTCTATC +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWSLSFN*SGPDSI
Trigger: GATAGAATCTGGCCCAGACCAGTTGAATGACAATGA...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACACAACTTTGGACGGGTaGAGGATCCCGGACGGGGCG +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNTTLDG*RIPDGA
Trigger: CGCCCCGTCCGGGATCCTCCACCCGTCCAAAGTTGT...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396200.3
CDS-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGCATTTGCAGGCAGCTaGTTGCTGTCAAATCCAAGG +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEAFAGS*LLSNPR
Trigger: CCTTGGATTTGACAGCAATCAGCTGCCTGCAAATGC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACCAGTATTGGCCACATaGAGGTCAACACCATCCACA +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEPVLAT*RSTPST
Trigger: TGTGGATGGTGTTGACCTTCATGTGGCCAATACTGG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGCTATTGGCTGTTGGTaGTGCATGCCAGTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEAIGCW*CMPVRY
Trigger: GTACCTAACTGGCATGCATCACCAACAGCCAATAGC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGAAGGTGCCATGAAATCTaGGCTAGGCAGGACCAGACT +
Preference number: 4 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARRCHEI*ARQDQT
Trigger: AGTCTGGTCCTGCCTAGCTCAGATTTCATGGCACCT...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGAGCAGGCTGGAACTTCTaGCTGGGATTCCAATTCGTC +
Preference number: 4 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARAGWNF*LGFQFV
Trigger: GACGAATTGGAATCCCAGTCAGAAGTTCCAGCCTGC...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACTCAATGGGTGCATTTaGAGGCAGCTGATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHELNGCI*RQLIAV
Trigger: GACAGCAATCAGCTGCCTGCAAATGCACCCATTGAG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAGGTCTGCAAGCAGGTTaGTGCACTTCTCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRGLQAG*CTSPVL
Trigger: GAGGACCGGAGAAGTGCAGCAACCTGCTTGCAGACC...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAGTGGCTCCAGAAAATaGCACTCGAAGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHESGSRK*HSKHQV
Trigger: TACCTGGTGCTTCGAGTGGCATTTTCTGGAGCCACT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAACACCCAGCATGGCTCTaGTATCGCCAGTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIEHPAWL*YRQYWP
Trigger: TGGCCAATACTGGCGATAGCAGAGCCATGCTGGGTG...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCCACCCAGCATGGCTCTaGTATCGCCAGTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCHPAWL*YRQYWP
Trigger: TGGCCAATACTGGCGATAGCAGAGCCATGCTGGGTG...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGGAGCCGTCCTCTTCCTaGACACCCAGCATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQEPSSS*TPSMAL
Trigger: CAGAGCCATGCTGGGTGTGCAGGAAGAGGACGGCTC...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAAGAGCCGTCCTCTTCCTaGACACCCAGCATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKEPSSS*TPSMAL
Trigger: CAGAGCCATGCTGGGTGTGCAGGAAGAGGACGGCTC...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACACACACTTACGGCATaGCAAGCCTTTGGGGATTAC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEHTLTA*QAFGDY
Trigger: GTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACTTTCACTGACTGCCTaGGAACAAGCACAACCTGCA +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHELSLTA*EQAQPA
Trigger: TGCAGGTTGTGCTTGTTCCCAGGCAGTCAGTGAAAG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGGGCCACACAAGCAGTaGCTCCAGAAAATGCCACTC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCGPHKQ*LQKMPL
Trigger: GAGTGGCATTTTCTGGAGCCACTGCTTGTGTGGCCC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCTCAACACCATCCACATaGGCCACACAAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLSTPST*ATQAVA
Trigger: AGCCACTGCTTGTGTGGCCCATGTGGATGGTGTTGA...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAACCTGCACACCCAGCATaGCTCTGCTATCGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIEPAHPA*LCYRQY
Trigger: ATACTGGCGATAGCAGAGCCATGCTGGGTGTGCAGG...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCCCTGCACACCCAGCATaGCTCTGCTATCGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCPAHPA*LCYRQY
Trigger: ATACTGGCGATAGCAGAGCCATGCTGGGTGTGCAGG...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACGGATTCCAATTCGTCTaGGCCCGGGACACACACACA +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHGFQFV*ARDTHT
Trigger: TGTGTGTGTGTCCCGGGCCCAGACGAATTGGAATCC...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGTAGCATATGCTGGATaGGGTGTGTATCTCAGTCGA +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEVAYAG*GVYLSR
Trigger: TCGACTGAGATACACACCTCATCCAGCATATGCTAC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAAAAGAGTCTTTCACTaGCTGCCTGGGAACAAGCAC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEKRVFH*LPGNKH
Trigger: GTGCTTGTTCCCAGGCAGTCAGTGAAAGACTCTTTT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGAGTTCTCTTTCATTTTaGGCATTGTGGTCATTAGAC +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWSSLSF*ALWSLD
Trigger: GTCTAATGACCACAATGCTCAAAATGAAAGAGAACT...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCCCTCTGGCTCAGCAGTaGGATAAGGAGGTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCPLAQQ*DKEVCD
Trigger: ATCACACACCTCCTTATCTCACTGCTGAGCCAGAGG...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTGGGTTGCTGCGTTCTaGTCCTCAAATACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCWVAAF*SSNTED
Trigger: GTCCTCGGTATTTGAGGATCAGAACGCAGCAACCCA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACTGGGTTGCTGCGTTCTaGTCCTCAAATACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHWVAAF*SSNTED
Trigger: GTCCTCGGTATTTGAGGATCAGAACGCAGCAACCCA...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATCCACAGCGTGGCGAATaGGATGGGTTGCTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: HNGKLILACIKIQVNIKHPQRGE*DGLLRS
Trigger: AGAACGCAGCAACCCATCTCATTCGCCACGCTGTGG...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAACCACAGCGTGGCGAATaGGATGGGTTGCTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKPQRGE*DGLLRS
Trigger: AGAACGCAGCAACCCATCTCATTCGCCACGCTGTGG...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATTGGTCATTTATGGCTTaGAGAACTGGATTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDWSFMA*RTGFEN
Trigger: GTTTTCAAATCCAGTTCTTCAAGCCATAAATGACCA...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGGAGCAGCAATCTTCCTaGGTCTATTTTCAATTGAAA +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWEQQSS*VYFQLK
Trigger: TTTCAATTGAAAATAGACTCAGGAAGATTGCTGCTC...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATATTATTTGGTGTATATaGAACTCTTCAGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDIIWCI*NSSVVV
Trigger: CACCACCACTGAAGAGTTTCATATACACCAAATAAT...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGCAGGCTGGAACTTCTaGCTGGGATTCCAATTCGTC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCAGWNF*LGFQFV
Trigger: GACGAATTGGAATCCCAGTCAGAAGTTCCAGCCTGC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACAGTGCCATAGATCCTaGTCAGTTCACAGTTACGGA +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEQCHRS*SVHSYG
Trigger: TCCGTAACTGTGAACTGAGCAGGATCTATGGCACTG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGGCAGTAACATGCAGTaGCATAGATCCTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEGSNMQ*HRSCSV
Trigger: AACTGAGCAGGATCTATGGCACTGCATGTTACTGCC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTCTTCCTTGGGTGTACTaGCACCAGTTCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCLPWVY*HQFSFG
Trigger: GCCAAAGGAGAACTGGTGGCAGTACACCCAAGGAAG...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCCCGGTCCTCAATGGGTaGATTTGCAGGCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCPVLNG*ICRQLI
Trigger: AATCAGCTGCCTGCAAATGCACCCATTGAGGACCGG...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACCTGCAAGCAGGTTGCTaGACTTCTCCGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHLQAGC*TSPVLN
Trigger: ATTGAGGACCGGAGAAGTGCAGCAACCTGCTTGCAG...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCCTGCAAGCAGGTTGCTaGACTTCTCCGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCLQAGC*TSPVLN
Trigger: ATTGAGGACCGGAGAAGTGCAGCAACCTGCTTGCAG...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAATTAGGATCACCAACTTaGGCCTCCAAGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHELGSPT*ASKEMS
Trigger: TGACATCTCCTTGGAGGCGCAAGTTGGTGATCCTAA...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAATCCTAACCACATCCTaGCTATGCATAGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEILTTS*LCIVSH
Trigger: GTGGGAGACTATGCATAGGCAGGATGTGGTTAGGAT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAATCTGTTAAAAGGCCATaGATCTGTCCCAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHESVKRP*ICPRVT
Trigger: GGTGACTCTGGGACAGATGCATGGCCTTTTAACAGA...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGCGAATGAGATGGGTTaGTGCGTTCTGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEANEMG*CVLILK
Trigger: TTTGAGGATCAGAACGCAGCAACCCATCTCATTCGC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATAGTGATGACAATATGTaGACAGCTGTATACAGATCA +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDSDDNM*TAVYRS
Trigger: TGATCTGTATACAGCTGTGCACATATTGTCATCACT...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGAGTTGGTGCTGGCATaGCATCAGAGAACAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCELVLA*HQRTVA
Trigger: TGCCACTGTTCTCTGATGCCATGCCAGCACCAACTC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACCACCAGTTCTCCTTTaGCCTGCAAAAGGTAGCATA +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEPPVLL*PAKGSI
Trigger: TATGCTACCTTTTGCAGGCCAAAGGAGAACTGGTGG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGGATGCTATTGACTTGTaGAGGTGTGAGGTAAAATTT +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWDAIDL*RCEVKF
Trigger: AAATTTTACCTCACACCTCCACAAGTCAATAGCATC...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTTTGCCGTCAAATTCTaGCACTTTGAAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWFAVKF*HFETVF
Trigger: GAATACAGTTTCAAAGTGCCAGAATTTGACGGCAAA...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTTCTCCGGTCCTCAATaGGTGCATTTGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCFSGPQ*VHLQAA
Trigger: AGCTGCCTGCAAATGCACCCATTGAGGACCGGAGAA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAAGGGTGCTTGTGCCACTaGAGAATGGGTAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKGCLCH*RMGSSA
Trigger: GGCACTGCTACCCATTCTCCAGTGGCACAAGCACCC...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAGGGCCACACAAGCAGTaGCTCCAGAAAATGCCACTC +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRGPHKQ*LQKMPL
Trigger: GAGTGGCATTTTCTGGAGCCACTGCTTGTGTGGCCC...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTCAACACCATCCACATaGGCCACACAAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCSTPST*ATQAVA
Trigger: AGCCACTGCTTGTGTGGCCCATGTGGATGGTGTTGA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAATGCTATCGCCAGTATTaGCCACATGAAGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHECYRQY*PHEGQH
Trigger: GTGTTGACCTTCATGTGGCCAATACTGGCGATAGCA...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACTTGGCCTCACTCTTTaGATGTTCCAATTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHELGLTL*MFQFQP
Trigger: CGGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGCCACCAACAGCTATTaGCTGTTGGTGATGCATGCC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCATNSY*LLVMHA
Trigger: GGCATGCATCACCAACAGCCAATAGCTGTTGGTGGC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACGCCACCAACAGCTATTaGCTGTTGGTGATGCATGCC +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHATNSY*LLVMHA
Trigger: GGCATGCATCACCAACAGCCAATAGCTGTTGGTGGC...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTACACACACATTCTCCTaGCGCTCCAGGGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCTHTFS*RSRARP
Trigger: TGGACGAGCCCTGGAGCGCCAGGAGAATGTGTGTGT...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396200.3
CDS-3UTR TCA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGCATTTGCAGGCAGCTaGTTGCTGTCAAATCCAAGG +
Preference number: 4 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIEAFAGS*LLSNPR
Trigger: CCTTGGATTTGACAGCAATCAGCTGCCTGCAAATGC...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACGCATTTGCAGGCAGCTaGTTGCTGTCAAATCCAAGG +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHAFAGS*LLSNPR
Trigger: CCTTGGATTTGACAGCAATCAGCTGCCTGCAAATGC...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAAGGTGCCATGAAATCTaGGCTAGGCAGGACCAGACT +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRRCHEI*ARQDQT
Trigger: AGTCTGGTCCTGCCTAGCTCAGATTTCATGGCACCT...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACCTCAATGGGTGCATTTaGAGGCAGCTGATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHLNGCI*RQLIAV
Trigger: GACAGCAATCAGCTGCCTGCAAATGCACCCATTGAG...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACCGGTCCTCAATGGGTaGATTTGCAGGCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRPVLNG*ICRQLI
Trigger: AATCAGCTGCCTGCAAATGCACCCATTGAGGACCGG...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACAGTGGCTCCAGAAAATaGCACTCGAAGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHSGSRK*HSKHQV
Trigger: TACCTGGTGCTTCGAGTGGCATTTTCTGGAGCCACT...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACAGTGGCTCCAGAAAATaGCACTCGAAGCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHSGSRK*HSKHQV
Trigger: TACCTGGTGCTTCGAGTGGCATTTTCTGGAGCCACT...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAACACCCAGCATGGCTCTaGTATCGCCAGTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKHPAWL*YRQYWP
Trigger: TGGCCAATACTGGCGATAGCAGAGCCATGCTGGGTG...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGCTGTTGGTGATGCATaGCAGTTAGGTACTCACCCA +
Preference number: 4 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIEAVGDA*QLGTHP
Trigger: TGGGTGAGTACCTAACTGGCATGCATCACCAACAGC...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGCTGTTGGTGATGCATaGCAGTTAGGTACTCACCCA +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCAVGDA*QLGTHP
Trigger: TGGGTGAGTACCTAACTGGCATGCATCACCAACAGC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTCACACACTTACGGCATaGCAAGCCTTTGGGGATTAC +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCHTLTA*QAFGDY
Trigger: GTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGCATATCTCCTTCCTTaGGTGTACTGCCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCAYLLP*VYCHQF
Trigger: GAACTGGTGGCAGTACACCCAAGGAAGGAGATATGC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACGCATATCTCCTTCCTTaGGTGTACTGCCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHAYLLP*VYCHQF
Trigger: GAACTGGTGGCAGTACACCCAAGGAAGGAGATATGC...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACGCATATCTCCTTCCTTaGGTGTACTGCCACCAGTTC +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHAYLLP*VYCHQF
Trigger: GAACTGGTGGCAGTACACCCAAGGAAGGAGATATGC...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACGGGCCACACAAGCAGTaGCTCCAGAAAATGCCACTC +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNGPHKQ*LQKMPL
Trigger: GAGTGGCATTTTCTGGAGCCACTGCTTGTGTGGCCC...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGATCAACACCATCCACATaGGCCACACAAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRSTPST*ATQAVA
Trigger: AGCCACTGCTTGTGTGGCCCATGTGGATGGTGTTGA...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGATCCAAATGCCCTAAATaGCATCAGCAAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARSKCPK*HQQAKQ
Trigger: CTGCTTGGCTTGCTGATGCCATTTAGGGCATTTGGA...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGTCATTCAACTGGTCTaGGCCAGATTCTATCACTCT +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEVIQLV*ARFYHS
Trigger: AGAGTGATAGAATCTGGCCCAGACCAGTTGAATGAC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATTTGTCTCCAAGTGTGTaGCAAAATAGAAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDLSPSV*QNRKSF
Trigger: GAAAGATTTTCTATTTTGCCACACACTTGGAGACAA...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTATGAAACTCTTCAGTaGTGGTGTTCAAGAATATTC +
Preference number: 4 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWYETLQ*WCSRIF
Trigger: GAATATTCTTGAACACCACCACTGAAGAGTTTCATA...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGCTGGAACTTCTGACTaGGATTCCAATTCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCAGTSD*DSNSSG
Trigger: CCCAGACGAATTGGAATCCCAGTCAGAAGTTCCAGC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTGCTGGAACTTCTGACTaGGATTCCAATTCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCAGTSD*DSNSSG
Trigger: CCCAGACGAATTGGAATCCCAGTCAGAAGTTCCAGC...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACTGAGGAATGTACGATaGGGAACAACAGAGATGTTT +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHELRNVR*GTTEMF
Trigger: AAACATCTCTGTTGTTCCTCATCGTACATTCCTCAG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACGTAGCATATGCTGGATaGGGTGTGTATCTCAGTCGA +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHVAYAG*GVYLSR
Trigger: TCGACTGAGATACACACCTCATCCAGCATATGCTAC...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACCAGTATTGGCCACATaGAGGTCAACACCATCCACA +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRPVLAT*RSTPST
Trigger: TGTGGATGGTGTTGACCTTCATGTGGCCAATACTGG...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTCCTCTGGCTCAGCAGTaGGATAAGGAGGTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCPLAQQ*DKEVCD
Trigger: ATCACACACCTCCTTATCTCACTGCTGAGCCAGAGG...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAACCTCTGGCTCAGCAGTaGGATAAGGAGGTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKPLAQQ*DKEVCD
Trigger: ATCACACACCTCCTTATCTCACTGCTGAGCCAGAGG...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAATGGGTTGCTGCGTTCTaGTCCTCAAATACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKWVAAF*SSNTED
Trigger: GTCCTCGGTATTTGAGGATCAGAACGCAGCAACCCA...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATAGGTGCCATGAAATCTaGGCTAGGCAGGACCAGACT +
Preference number: 4 (lower is better)
Translates to: HNGKLILACIKIQVNIKHRCHEI*ARQDQT
Trigger: AGTCTGGTCCTGCCTAGCTCAGATTTCATGGCACCT...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAAGCAGGCTGGAACTTCTaGCTGGGATTCCAATTCGTC +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKAGWNF*LGFQFV
Trigger: GACGAATTGGAATCCCAGTCAGAAGTTCCAGCCTGC...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCCAGTGCCATAGATCCTaGTCAGTTCACAGTTACGGA +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCQCHRS*SVHSYG
Trigger: TCCGTAACTGTGAACTGAGCAGGATCTATGGCACTG...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGGCAGTAACATGCAGTaGCATAGATCCTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCGSNMQ*HRSCSV
Trigger: AACTGAGCAGGATCTATGGCACTGCATGTTACTGCC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGCAAAAGGTAGCATATaGTGGATGAGGTGTGTATCT +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEAKGSI*WMRCVS
Trigger: AGATACACACCTCATCCAGCATATGCTACCTTTTGC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTCTTCCTTGGGTGTACTaGCACCAGTTCTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCLPWVY*HQFSFG
Trigger: GCCAAAGGAGAACTGGTGGCAGTACACCCAAGGAAG...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTCCGGTCCTCAATGGGTaGATTTGCAGGCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCPVLNG*ICRQLI
Trigger: AATCAGCTGCCTGCAAATGCACCCATTGAGGACCGG...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGCTGCAAGCAGGTTGCTaGACTTCTCCGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQLQAGC*TSPVLN
Trigger: ATTGAGGACCGGAGAAGTGCAGCAACCTGCTTGCAG...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAACTGCAAGCAGGTTGCTaGACTTCTCCGGTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKLQAGC*TSPVLN
Trigger: ATTGAGGACCGGAGAAGTGCAGCAACCTGCTTGCAG...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAAAGCATCCCTCTGGTCTaGAAGCAGGTTGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKSIPLV*KQVAAL
Trigger: AAGTGCAGCAACCTGCTTGCAGACCAGAGGGATGCT...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGAGCATCCCTCTGGTCTaGAAGCAGGTTGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQSIPLV*KQVAAL
Trigger: AAGTGCAGCAACCTGCTTGCAGACCAGAGGGATGCT...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTAGCATCCCTCTGGTCTaGAAGCAGGTTGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCSIPLV*KQVAAL
Trigger: AAGTGCAGCAACCTGCTTGCAGACCAGAGGGATGCT...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTTAGGATCACCAACTTaGGCCTCCAAGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCLGSPT*ASKEMS
Trigger: TGACATCTCCTTGGAGGCGCAAGTTGGTGATCCTAA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTATCCTAACCACATCCTaGCTATGCATAGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCILTTS*LCIVSH
Trigger: GTGGGAGACTATGCATAGGCAGGATGTGGTTAGGAT...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACATCCTAACCACATCCTaGCTATGCATAGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHILTTS*LCIVSH
Trigger: GTGGGAGACTATGCATAGGCAGGATGTGGTTAGGAT...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCATCCTAACCACATCCTaGCTATGCATAGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCILTTS*LCIVSH
Trigger: GTGGGAGACTATGCATAGGCAGGATGTGGTTAGGAT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAATGAGATGGGTTGCTaGGTTCTGATCCTCAAATAC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHENEMGC*VLILKY
Trigger: GTATTTGAGGATCAGAACGCAGCAACCCATCTCATT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGCGAATGAGATGGGTTaGTGCGTTCTGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIEANEMG*CVLILK
Trigger: TTTGAGGATCAGAACGCAGCAACCCATCTCATTCGC...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACCTGACCCTGCCACCCTaGTGCAAAGTCAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNLTLPP*CKVNLE
Trigger: CTCCAAATTGACTTTGCAGCAGGGTGGCAGGGTCAG...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGCTGACCCTGCCACCCTaGTGCAAAGTCAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQLTLPP*CKVNLE
Trigger: CTCCAAATTGACTTTGCAGCAGGGTGGCAGGGTCAG...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAAAGGTAGCATATGCTaGATGAGGTGTGTATCTCAG +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEKGSIC*MRCVSQ
Trigger: CTGAGATACACACCTCATCCAGCATATGCTACCTTT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACCCACCAGTTCTCCTTTaGCCTGCAAAAGGTAGCATA +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHPPVLL*PAKGSI
Trigger: TATGCTACCTTTTGCAGGCCAAAGGAGAACTGGTGG...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGTTCTCCGGTCCTCAATaGGTGCATTTGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQFSGPQ*VHLQAA
Trigger: AGCTGCCTGCAAATGCACCCATTGAGGACCGGAGAA...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATTTCTCCGGTCCTCAATaGGTGCATTTGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HNGKLILACIKIQVNIKHFSGPQ*VHLQAA
Trigger: AGCTGCCTGCAAATGCACCCATTGAGGACCGGAGAA...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAATTCTCCGGTCCTCAATaGGTGCATTTGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKFSGPQ*VHLQAA
Trigger: AGCTGCCTGCAAATGCACCCATTGAGGACCGGAGAA...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACTGCTATCGCCAGTATTaGCCACATGAAGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHCYRQY*PHEGQH
Trigger: GTGTTGACCTTCATGTGGCCAATACTGGCGATAGCA...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTGCTATCGCCAGTATTaGCCACATGAAGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCCYRQY*PHEGQH
Trigger: GTGTTGACCTTCATGTGGCCAATACTGGCGATAGCA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAACTTGGCCTCACTCTTTaGATGTTCCAATTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIELGLTL*MFQFQP
Trigger: CGGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAG...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACTCCAAATGCCCTAAATaGCATCAGCAAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHSKCPK*HQQAKQ
Trigger: CTGCTTGGCTTGCTGATGCCATTTAGGGCATTTGGA...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTCCAAATGCCCTAAATaGCATCAGCAAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCSKCPK*HQQAKQ
Trigger: CTGCTTGGCTTGCTGATGCCATTTAGGGCATTTGGA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAATCATTGTCATTCAACTaGTCTGGGCCAGATTCTATC +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHESLSFN*SGPDSI
Trigger: GATAGAATCTGGCCCAGACCAGTTGAATGACAATGA...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGTGGTAAGTTACCTCTaGCTCAGCAGTGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCVVSYL*LSSEIR
Trigger: CCTTATCTCACTGCTGAGCCAGAGGTAACTTACCAC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTGTGGTAAGTTACCTCTaGCTCAGCAGTGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCVVSYL*LSSEIR
Trigger: CCTTATCTCACTGCTGAGCCAGAGGTAACTTACCAC...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCGGCATGCCAAGCCTTTaGGGATTACATAAGAGTGAT +
Preference number: 4 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLGMPSL*GLHKSD
Trigger: ATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAGCTGGAACTTCTGACTaGGATTCCAATTCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRAGTSD*DSNSSG
Trigger: CCCAGACGAATTGGAATCCCAGTCAGAAGTTCCAGC...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTATCTCAGTCGACTCTaGGGAATGTACGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCYLSRL*GMYDEE
Trigger: TTCCTCATCGTACATTCCTCAGAGTCGACTGAGATA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACTATCTCAGTCGACTCTaGGGAATGTACGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHYLSRL*GMYDEE
Trigger: TTCCTCATCGTACATTCCTCAGAGTCGACTGAGATA...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGCATTTGCAGGCAGCTaGTTGCTGTCAAATCCAAGG +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCAFAGS*LLSNPR
Trigger: CCTTGGATTTGACAGCAATCAGCTGCCTGCAAATGC...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAAAAAGAGTCTTTCACTaGCTGCCTGGGAACAAGCAC +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRKRVFH*LPGNKH
Trigger: GTGCTTGTTCCCAGGCAGTCAGTGAAAGACTCTTTT...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTCCAGTATTGGCCACATaGAGGTCAACACCATCCACA +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCPVLAT*RSTPST
Trigger: TGTGGATGGTGTTGACCTTCATGTGGCCAATACTGG...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGGTCAATGCTCCATTTaGACTTTACATCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEGQCSI*TLHLQM
Trigger: CATTTGGAGATGTAAAGTTCAAATGGAGCATTGACC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAATCTATCACTCTCTTTTaGAGGTCAATGCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHESITLF*RSMLHL
Trigger: CAAATGGAGCATTGACCTTCAAAAGAGAGTGATAGA...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATGCTATTGGCTGTTGGTaGTGCATGCCAGTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: HNGKLILACIKIQVNIKHAIGCW*CMPVRY
Trigger: GTACCTAACTGGCATGCATCACCAACAGCCAATAGC...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGGCTATTGGCTGTTGGTaGTGCATGCCAGTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQAIGCW*CMPVRY
Trigger: GTACCTAACTGGCATGCATCACCAACAGCCAATAGC...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGATTTGAGAATTGCCAGTaGAAGAGCCACTCACTATTC +
Preference number: 4 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARFENCQ*KSHSLF
Trigger: GAATAGTGAGTGGCTCTTTCACTGGCAATTCTCAAA...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAACCTGTGATAAAGAAGTaGCTTGCTTCAAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIEPVIKK*LASSAG
Trigger: ACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGG...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCCCTGTGATAAAGAAGTaGCTTGCTTCAAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCPVIKK*LASSAG
Trigger: ACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGG...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACCCTGTGATAAAGAAGTaGCTTGCTTCAAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHPVIKK*LASSAG
Trigger: ACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGG...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAACTCAATGGGTGCATTTaGAGGCAGCTGATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKLNGCI*RQLIAV
Trigger: GACAGCAATCAGCTGCCTGCAAATGCACCCATTGAG...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGGCTGTTGGTGATGCATaGCAGTTAGGTACTCACCCA +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQAVGDA*QLGTHP
Trigger: TGGGTGAGTACCTAACTGGCATGCATCACCAACAGC...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGACAAGCTTCCAGACTaGAGACCAAGTTTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCDKLPD*RPSFLC
Trigger: ACACAAGAAACTTGGTCTGCAGTCTGGAAGCTTGTC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGCTTTCACTGACTGCCTaGGAACAAGCACAACCTGCA +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQLSLTA*EQAQPA
Trigger: TGCAGGTTGTGCTTGTTCCCAGGCAGTCAGTGAAAG...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACCTTTCACTGACTGCCTaGGAACAAGCACAACCTGCA +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNLSLTA*EQAQPA
Trigger: TGCAGGTTGTGCTTGTTCCCAGGCAGTCAGTGAAAG...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCTCTAGCAAAGTCTCATaGGGTAACAAAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLSSKVS*GNKETA
Trigger: TGCTGTCTCTTTGTTACCCCATGAGACTTTGCTAGA...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGTTTCACGACACTCTTaGCCTCACTCTTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCVSRHS*PHSLDV
Trigger: AACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAAC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGTCATTCAACTGGTCTaGGCCAGATTCTATCACTCT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCVIQLV*ARFYHS
Trigger: AGAGTGATAGAATCTGGCCCAGACCAGTTGAATGAC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCTCATTGTCATTCAACTaGTCTGGGCCAGATTCTATC +
Preference number: 4 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLSLSFN*SGPDSI
Trigger: GATAGAATCTGGCCCAGACCAGTTGAATGACAATGA...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTCTGAGGAATGTACGATaGGGAACAACAGAGATGTTT +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCLRNVR*GTTEMF
Trigger: AAACATCTCTGTTGTTCCTCATCGTACATTCCTCAG...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCCTGAGGAATGTACGATaGGGAACAACAGAGATGTTT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCLRNVR*GTTEMF
Trigger: AAACATCTCTGTTGTTCCTCATCGTACATTCCTCAG...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGATATCTCAGTCGACTCTaGGGAATGTACGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRYLSRL*GMYDEE
Trigger: TTCCTCATCGTACATTCCTCAGAGTCGACTGAGATA...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACAAAAGAGTCTTTCACTaGCTGCCTGGGAACAAGCAC +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNKRVFH*LPGNKH
Trigger: GTGCTTGTTCCCAGGCAGTCAGTGAAAGACTCTTTT...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTTTGAGAATTGCCAGTaGAAGAGCCACTCACTATTC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCFENCQ*KSHSLF
Trigger: GAATAGTGAGTGGCTCTTTCACTGGCAATTCTCAAA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAATCCAGAAGGAGTTCTTaGACATCTAGTTCATATCCC +
Preference number: 4 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIESRRSS*TSSSYP
Trigger: GGGATATGAACTAGATGTTCAAGAACTCCTTCTGGA...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAAAACAGTTGAGTTGGTaGTGGCATGGCATCAGAGAA +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRKQLSW*WHGIRE
Trigger: TTCTCTGATGCCATGCCAGCACCAACTCAACTGTTT...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGCAGTGCCATAGATCCTaGTCAGTTCACAGTTACGGA +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQQCHRS*SVHSYG
Trigger: TCCGTAACTGTGAACTGAGCAGGATCTATGGCACTG...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACCAGTGCCATAGATCCTaGTCAGTTCACAGTTACGGA +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNQCHRS*SVHSYG
Trigger: TCCGTAACTGTGAACTGAGCAGGATCTATGGCACTG...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACGGCAGTAACATGCAGTaGCATAGATCCTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNGSNMQ*HRSCSV
Trigger: AACTGAGCAGGATCTATGGCACTGCATGTTACTGCC...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAAGGCAGTAACATGCAGTaGCATAGATCCTGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKGSNMQ*HRSCSV
Trigger: AACTGAGCAGGATCTATGGCACTGCATGTTACTGCC...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACGCAAAAGGTAGCATATaGTGGATGAGGTGTGTATCT +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHAKGSI*WMRCVS
Trigger: AGATACACACCTCATCCAGCATATGCTACCTTTTGC...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGTTAGGATCACCAACTTaGGCCTCCAAGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQLGSPT*ASKEMS
Trigger: TGACATCTCCTTGGAGGCGCAAGTTGGTGATCCTAA...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTCTGTTAAAAGGCCATaGATCTGTCCCAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNSVKRP*ICPRVT
Trigger: GGTGACTCTGGGACAGATGCATGGCCTTTTAACAGA...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACAATGAGATGGGTTGCTaGGTTCTGATCCTCAAATAC +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHNEMGC*VLILKY
Trigger: GTATTTGAGGATCAGAACGCAGCAACCCATCTCATT...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACGCGAATGAGATGGGTTaGTGCGTTCTGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNANEMG*CVLILK
Trigger: TTTGAGGATCAGAACGCAGCAACCCATCTCATTCGC...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGATAAAGAAGTGACTTaGTTCAAGTGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCDKEVT*FKCRCH
Trigger: ATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAAAGGTAGCATATGCTaGATGAGGTGTGTATCTCAG +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCKGSIC*MRCVSQ
Trigger: CTGAGATACACACCTCATCCAGCATATGCTACCTTT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGCCACCAGTTCTCCTTTaGCCTGCAAAAGGTAGCATA +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQPPVLL*PAKGSI
Trigger: TATGCTACCTTTTGCAGGCCAAAGGAGAACTGGTGG...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTCTAGCAAAGTCTCATaGGGTAACAAAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCSSKVS*GNKETA
Trigger: TGCTGTCTCTTTGTTACCCCATGAGACTTTGCTAGA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACCTTGGCCTCACTCTTTaGATGTTCCAATTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNLGLTL*MFQFQP
Trigger: CGGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAG...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAGTTTCACGACACTCTTaGCCTCACTCTTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRVSRHS*PHSLDV
Trigger: AACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAAC...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTCATTGTCATTCAACTaGTCTGGGCCAGATTCTATC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCSLSFN*SGPDSI
Trigger: GATAGAATCTGGCCCAGACCAGTTGAATGACAATGA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAAGTGGTAAGTTACCTCTaGCTCAGCAGTGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKVVSYL*LSSEIR
Trigger: CCTTATCTCACTGCTGAGCCAGAGGTAACTTACCAC...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAATATCTCAGTCGACTCTaGGGAATGTACGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKYLSRL*GMYDEE
Trigger: TTCCTCATCGTACATTCCTCAGAGTCGACTGAGATA...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGGTCAATGCTCCATTTaGACTTTACATCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCGQCSI*TLHLQM
Trigger: CATTTGGAGATGTAAAGTTCAAATGGAGCATTGACC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTCTATCACTCTCTTTTaGAGGTCAATGCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCSITLF*RSMLHL
Trigger: CAAATGGAGCATTGACCTTCAAAAGAGAGTGATAGA...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGCCTGTGATAAAGAAGTaGCTTGCTTCAAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQPVIKK*LASSAG
Trigger: ACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGG...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTCAGCCAATAGTACACTaGTTCAGTATCCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCQPIVH*FSIHSP
Trigger: TGGACTGTGGATACTGAATCAGTGTACTATTGGCTG...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCGACACCGTACAACAGTaGCAACCAATTACAATAAAA +
Preference number: 4 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLDTVQQ*QPITIK
Trigger: TTTTATTGTAATTGGTTGTCACTGTTGTACGGTGTC...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAGCAAAAGGTAGCATATaGTGGATGAGGTGTGTATCT +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRAKGSI*WMRCVS
Trigger: AGATACACACCTCATCCAGCATATGCTACCTTTTGC...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCCTTTACATCTCCAAATaGCCTAAATGGCATCAGCAA +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCLYISK*PKWHQQ
Trigger: TTGCTGATGCCATTTAGGGCATTTGGAGATGTAAAG...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR GCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAGATAAAGAAGTGACTTaGTTCAAGTGCAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRDKEVT*FKCRCH
Trigger: ATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATC...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCACACAGCAAGATACTTaGTTTTGGCCTATTCAAGAT +
Preference number: 4 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLTQQDT*FWPIQD
Trigger: ATCTTGAATAGGCCAAAAGCAAGTATCTTGCTGTGT...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGAACACAGCAAGATACTTaGTTTTGGCCTATTCAAGAT +
Preference number: 4 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARTQQDT*FWPIQD
Trigger: ATCTTGAATAGGCCAAAAGCAAGTATCTTGCTGTGT...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAAGACAAGCTTCCAGACTaGAGACCAAGTTTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKDKLPD*RPSFLC
Trigger: ACACAAGAAACTTGGTCTGCAGTCTGGAAGCTTGTC...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAAGTTTCACGACACTCTTaGCCTCACTCTTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKVSRHS*PHSLDV
Trigger: AACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAAC...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGGTTTCACGACACTCTTaGCCTCACTCTTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQVSRHS*PHSLDV
Trigger: AACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAAC...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGGTCATTCAACTGGTCTaGGCCAGATTCTATCACTCT +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQVIQLV*ARFYHS
Trigger: AGAGTGATAGAATCTGGCCCAGACCAGTTGAATGAC...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTATAAGAGTGATGTGCTaGTGGCTACAGATGACAATA +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCIRVMC*WLQMTI
Trigger: TATTGTCATCTGTAGCCACCAGCACATCACTCTTAT...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGGGCATGCCAAGCCTTTaGGGATTACATAAGAGTGAT +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQGMPSL*GLHKSD
Trigger: ATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
3UTR CAA 72 bp TTCACTTTAACCAAGAGACTACACACAGCAAGATACTaGCTTTTGGCCTATTCAAGATCTTATTTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FTLTKRLHTARY*LLAYSRSYLPG
Trigger: ACCTGGCAAATAAGATCTTGAATAGGCCAAAAGCAAGTATCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACCTGAGGAATGTACGATaGGGAACAACAGAGATGTTT +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNLRNVR*GTTEMF
Trigger: AAACATCTCTGTTGTTCCTCATCGTACATTCCTCAG...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGTTCTCTTTCATTTTaGGCATTGTGGTCATTAGAC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCSSLSF*ALWSLD
Trigger: GTCTAATGACCACAATGCTCAAAATGAAAGAGAACT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR TCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGATCTATCACTCTCTTTTaGAGGTCAATGCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRSITLF*RSMLHL
Trigger: CAAATGGAGCATTGACCTTCAAAAGAGAGTGATAGA...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGTTTGAGAATTGCCAGTaGAAGAGCCACTCACTATTC +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQFENCQ*KSHSLF
Trigger: GAATAGTGAGTGGCTCTTTCACTGGCAATTCTCAAA...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAATCAATTTGGAGTACCTaGCTAGCTAGAGTATCAAAA +
Preference number: 4 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIESIWST*LARVSK
Trigger: TTTTGATACTCTAGCTAGTCAGGTACTCCAAATTGA...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACTCAATTTGGAGTACCTaGCTAGCTAGAGTATCAAAA +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHSIWST*LARVSK
Trigger: TTTTGATACTCTAGCTAGTCAGGTACTCCAAATTGA...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACTGGTCATTTATGGCTTaGAGAACTGGATTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHWSFMA*RTGFEN
Trigger: GTTTTCAAATCCAGTTCTTCAAGCCATAAATGACCA...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTCCAGAAGGAGTTCTTaGACATCTAGTTCATATCCC +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNSRRSS*TSSSYP
Trigger: GGGATATGAACTAGATGTTCAAGAACTCCTTCTGGA...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACGAGCAGCAATCTTCCTaGGTCTATTTTCAATTGAAA +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHEQQSS*VYFQLK
Trigger: TTTCAATTGAAAATAGACTCAGGAAGATTGCTGCTC...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACGACACCGTACAACAGTaGCAACCAATTACAATAAAA +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHDTVQQ*QPITIK
Trigger: TTTTATTGTAATTGGTTGTCACTGTTGTACGGTGTC...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAAGCAAAAGGTAGCATATaGTGGATGAGGTGTGTATCT +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKAKGSI*WMRCVS
Trigger: AGATACACACCTCATCCAGCATATGCTACCTTTTGC...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTTTACATCTCCAAATaGCCTAAATGGCATCAGCAA +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRLYISK*PKWHQQ
Trigger: TTGCTGATGCCATTTAGGGCATTTGGAGATGTAAAG...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACAATGAGATGGGTTGCTaGGTTCTGATCCTCAAATAC +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNNEMGC*VLILKY
Trigger: GTATTTGAGGATCAGAACGCAGCAACCCATCTCATT...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAACACAGCAAGATACTTaGTTTTGGCCTATTCAAGAT +
Preference number: 4 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIETQQDT*FWPIQD
Trigger: ATCTTGAATAGGCCAAAAGCAAGTATCTTGCTGTGT...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATTACATAAGAGTGATGTaGTGGTGGCTACAGATGACA +
Preference number: 4 (lower is better)
Translates to: HNGKLILACIKIQVNIKHYIRVM*WWLQMT
Trigger: TGTCATCTGTAGCCACCAGCACATCACTCTTATGTA...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACAGTGATGACAATATGTaGACAGCTGTATACAGATCA +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHSDDNM*TAVYRS
Trigger: TGATCTGTATACAGCTGTGCACATATTGTCATCACT...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAAAATTTCTGTGGTGTaGAAGCATATCTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCKISVV*KHISFL
Trigger: AAGGAAGGAGATATGCTTCCACACCACAGAAATTTT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACAAAATTTCTGTGGTGTaGAAGCATATCTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHKISVV*KHISFL
Trigger: AAGGAAGGAGATATGCTTCCACACCACAGAAATTTT...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGATGCTATTGACTTGTaGAGGTGTGAGGTAAAATTT +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCDAIDL*RCEVKF
Trigger: AAATTTTACCTCACACCTCCACAAGTCAATAGCATC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACGATGCTATTGACTTGTaGAGGTGTGAGGTAAAATTT +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHDAIDL*RCEVKF
Trigger: AAATTTTACCTCACACCTCCACAAGTCAATAGCATC...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTTTGCCGTCAAATTCTaGCACTTTGAAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCFAVKF*HFETVF
Trigger: GAATACAGTTTCAAAGTGCCAGAATTTGACGGCAAA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTTGCCGTCAAATTCTaGCACTTTGAAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCFAVKF*HFETVF
Trigger: GAATACAGTTTCAAAGTGCCAGAATTTGACGGCAAA...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTTCTAGCAAAGTCTCATaGGGTAACAAAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCSSKVS*GNKETA
Trigger: TGCTGTCTCTTTGTTACCCCATGAGACTTTGCTAGA...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTCTAGCAAAGTCTCATaGGGTAACAAAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNSSKVS*GNKETA
Trigger: TGCTGTCTCTTTGTTACCCCATGAGACTTTGCTAGA...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTGATCTTGGTCATTTATaGCTTGAAGAACTGGATTTG +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCDLGHL*LEELDL
Trigger: CAAATCCAGTTCTTCAAGCCATAAATGACCAAGATC...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTCAAGTTATTACACAATaGGAAGCTGATATTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCQVITQ*EADIGL
Trigger: CAAGCCAATATCAGCTTCCCATTGTGTAATAACTTG...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATGGTCAATGCTCCATTTaGACTTTACATCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: HNGKLILACIKIQVNIKHGQCSI*TLHLQM
Trigger: CATTTGGAGATGTAAAGTTCAAATGGAGCATTGACC...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTTCTATCACTCTCTTTTaGAGGTCAATGCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCSITLF*RSMLHL
Trigger: CAAATGGAGCATTGACCTTCAAAAGAGAGTGATAGA...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACATTATATGATATTCTaGGCAGCAATCTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRHYMIF*AAIFLS
Trigger: ACTCAGGAAGATTGCTGCTCAGAATATCATATAATG...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATCTTTACATCTCCAAATaGCCTAAATGGCATCAGCAA +
Preference number: 4 (lower is better)
Translates to: HNGKLILACIKIQVNIKHLYISK*PKWHQQ
Trigger: TTGCTGATGCCATTTAGGGCATTTGGAGATGTAAAG...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACCTTTACATCTCCAAATaGCCTAAATGGCATCAGCAA +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNLYISK*PKWHQQ
Trigger: TTGCTGATGCCATTTAGGGCATTTGGAGATGTAAAG...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR GCA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTATAATTATGGAGACTaGTGCAAACATTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCYNYGD*CKHLMP
Trigger: TGGCATCAAATGTTTGCAGCAGTCTCCATAATTATA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACTATAATTATGGAGACTaGTGCAAACATTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHYNYGD*CKHLMP
Trigger: TGGCATCAAATGTTTGCAGCAGTCTCCATAATTATA...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACAACACAGGAACAAAATaGCACTTGATGCATATCAAA +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHNTGTK*HLMHIK
Trigger: TTTGATATGCATCAAGTGGCATTTTGTTCCTGTGTT...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR GCA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACAACACAGGAACAAAATaGCACTTGATGCATATCAAA +
Preference number: 4 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHNTGTK*HLMHIK
Trigger: TTTGATATGCATCAAGTGGCATTTTGTTCCTGTGTT...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTGTCTCCAAGTGTGTaGCAAAATAGAAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCLSPSV*QNRKSF
Trigger: GAAAGATTTTCTATTTTGCCACACACTTGGAGACAA...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGAGAGTGATGTGCTGGTaGCTACAGATGACAATAATT +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQRVMCW*LQMTII
Trigger: AATTATTGTCATCTGTAGCCACCAGCACATCACTCT...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGAGAGTGATGTGCTGGTaGCTACAGATGACAATAATT +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQRVMCW*LQMTII
Trigger: AATTATTGTCATCTGTAGCCACCAGCACATCACTCT...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGATAAGAGTGATGTGCTaGTGGCTACAGATGACAATA +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQIRVMC*WLQMTI
Trigger: TATTGTCATCTGTAGCCACCAGCACATCACTCTTAT...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACAAGTTATTACACAATaGGAAGCTGATATTGGCTTG +
Preference number: 4 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRQVITQ*EADIGL
Trigger: CAAGCCAATATCAGCTTCCCATTGTGTAATAACTTG...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACTATGAAACTCTTCAGTaGTGGTGTTCAAGAATATTC +
Preference number: 4 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHYETLQ*WCSRIF
Trigger: GAATATTCTTGAACACCACCACTGAAGAGTTTCATA...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATAGTTCTCTTTCATTTTaGGCATTGTGGTCATTAGAC +
Preference number: 4 (lower is better)
Translates to: HNGKLILACIKIQVNIKHSSLSF*ALWSLD
Trigger: GTCTAATGACCACAATGCTCAAAATGAAAGAGAACT...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGAGTTCTCTTTCATTTTaGGCATTGTGGTCATTAGAC +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQSSLSF*ALWSLD
Trigger: GTCTAATGACCACAATGCTCAAAATGAAAGAGAACT...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR TCA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATCATTATATGATATTCTaGGCAGCAATCTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HNGKLILACIKIQVNIKHHYMIF*AAIFLS
Trigger: ACTCAGGAAGATTGCTGCTCAGAATATCATATAATG...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR TCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGATTATTTGGTGTATATaGAACTCTTCAGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQIIWCI*NSSVVV
Trigger: CACCACCACTGAAGAGTTTCATATACACCAAATAAT...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTAAAATTTCTGTGGTGTaGAAGCATATCTCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCKISVV*KHISFL
Trigger: AAGGAAGGAGATATGCTTCCACACCACAGAAATTTT...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGATGCTATTGACTTGTaGAGGTGTGAGGTAAAATTT +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCDAIDL*RCEVKF
Trigger: AAATTTTACCTCACACCTCCACAAGTCAATAGCATC...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGTTTGCCGTCAAATTCTaGCACTTTGAAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQFAVKF*HFETVF
Trigger: GAATACAGTTTCAAAGTGCCAGAATTTGACGGCAAA...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGGATCTTGGTCATTTATaGCTTGAAGAACTGGATTTG +
Preference number: 4 (lower is better)
Translates to: LSLFSIETNSAANSTLIQDLGHL*LEELDL
Trigger: CAAATCCAGTTCTTCAAGCCATAAATGACCAAGATC...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGATCTTGGTCATTTATaGCTTGAAGAACTGGATTTG +
Preference number: 4 (lower is better)
Translates to: HAINICSHVHWNLSEERCDLGHL*LEELDL
Trigger: CAAATCCAGTTCTTCAAGCCATAAATGACCAAGATC...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
3UTR CAA 72 bp TGCAGACCAAGTTTCTTGTGTAATAATACTACTATCTaGATCATGACCACAGGAAACCAATTTTATATTCCC +
Preference number: 4 (lower is better)
Translates to: CRPSFLCNNTTI*IMTTGNQFYIP
Trigger: GGGAATATAAAATTGGTTTCCTGTGGTCATGATCAAGATAGTAGTATTATTACACAAGAAACTTGGTCTGCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAATTGTCTCCAAGTGTGTaGCAAAATAGAAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKLSPSV*QNRKSF
Trigger: GAAAGATTTTCTATTTTGCCACACACTTGGAGACAA...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CCA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGGTTTTCTTAGCAATATaGTACTCTGTACCATACCAA +
Preference number: 4 (lower is better)
Translates to: INICSHVHWNLSEERCEQVFLAI*YSVPYQ
Trigger: TTGGTATGGTACAGAGTACCATATTGCTAAGAAAAC...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CCA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACGTTTTCTTAGCAATATaGTACTCTGTACCATACCAA +
Preference number: 4 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNVFLAI*YSVPYQ
Trigger: TTGGTATGGTACAGAGTACCATATTGCTAAGAAAAC...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS CCA 90 bp CGCGGCCGCCGATCCGCGAGCACGCCCGGCGCCCCCTCACAACTTTaGACGGGTGGAGGATCCCGGACGGGGCGGCTCGTGGCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: RGRRSASTPGAPSQL*TGGGSRTGRLVAGS
Trigger: ACTCCCTGCCACGAGCCGCCCCGTCCGGGATCCTCCACCCGTCCAAAGTTGTGAGGGGGCGCCGGGCGTGCTCGCGGATCGGCGGCCGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396200.3
ENST00000518107.5
ENST00000518573.1
CDS GCA 90 bp GGCGACAACGACGCCACCGCTCGGCGCTCTTTCCACGCAGCCCCGTaGAGCTCCCGGAGCGCGAGCCCTCACCCCCGGCCTGCCCACTCT +
Preference number: 5 (lower is better)
Translates to: GDNDATARRSFHAAP*SSRSASPHPRPAHS
Trigger: AGAGTGGGCAGGCCGGGGGTGAGGGCTCGCGCTCCGGGAGCTGCACGGGGCTGCGTGGAAAGAGCGCCGAGCGGTGGCGTCGTTGTCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000518107.5
ENST00000520728.5
CDS CCA 90 bp CCTCACAACTTTGGACGGGTGGAGGATCCCGGACGGGGCGGCTCGTaGCAGGGAGTAGGGAATACGAACCGGGCACGGCAGGAGACCAAA +
Preference number: 5 (lower is better)
Translates to: PHNFGRVEDPGRGGS*QGVGNTNRARQETK
Trigger: TTTGGTCTCCTGCCGTGCCCGGTTCGTATTCCCTACTCCCTGCCACGAGCCGCCCCGTCCGGGATCCTCCACCCGTCCAAAGTTGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396200.3
ENST00000518107.5
ENST00000518573.1
CDS CCA 90 bp AAGCCCAGTAGATGGTCTTGCAAAACTTGCTTCTCTAGTCCACTGTaGCAATTTGCCAGGCTAACGGGCATAGGTCTGCCACCAACTCCC +
Preference number: 5 (lower is better)
Translates to: KPSRWSCKTCFSSPL*QFARLTGIGLPPTP
Trigger: GGGAGTTGGTGGCAGACCTATGCCCGTTAGCCTGGCAAATTGCCACAGTGGACTAGAGAAGCAAGTTTTGCAAGACCATCTACTGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518827.1
CDS TCA 90 bp CGAGCAAGCTCTTCAGGAAGACTAAGCATTTTAGAGAGGCGCTCATaGTCAACAGTCCCAAACTCGTTGTTGCCCACAGCGTGGCGAATG +
Preference number: 5 (lower is better)
Translates to: RASSSGRLSILERRS*STVPNSLLPTAWRM
Trigger: CATTCGCCACGCTGTGGGCAACAACGAGTTTGGGACTGTTGATCATGAGCGCCTCTCTAAAATGCTTAGTCTTCCTGAAGAGCTTGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS GCA 90 bp TCTGGTCTGCAAGCAGGTTGCTGCACTTCTCCGGTCCTCAATGGGTaGATTTGCAGGCAGCTGATTGCTGTCAAATCCAAGGATAGAACT +
Preference number: 5 (lower is better)
Translates to: SGLQAGCCTSPVLNG*ICRQLIAVKSKDRT
Trigger: AGTTCTATCCTTGGATTTGACAGCAATCAGCTGCCTGCAAATGCACCCATTGAGGACCGGAGAAGTGCAGCAACCTGCTTGCAGACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS GCA 90 bp CCCAAACTCGTTGTTGCCCACAGCGTGGCGAATGAGATGGGTTGCTaGGTTCTGATCCTCAAATACCGAGGACATTTTGGTTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: PKLVVAHSVANEMGC*VLILKYRGHFGSPF
Trigger: GAAAGGAGAACCAAAATGTCCTCGGTATTTGAGGATCAGAACGCAGCAACCCATCTCATTCGCCACGCTGTGGGCAACAACGAGTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS GCA 90 bp AGTCCCAAACTCGTTGTTGCCCACAGCGTGGCGAATGAGATGGGTTaGTGCGTTCTGATCCTCAAATACCGAGGACATTTTGGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SPKLVVAHSVANEMG*CVLILKYRGHFGSP
Trigger: AGGAGAACCAAAATGTCCTCGGTATTTGAGGATCAGAACGCAGCAACCCATCTCATTCGCCACGCTGTGGGCAACAACGAGTTTGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS GCA 90 bp GGTGTACTGCCACCAGTTCTCCTTTGGCCTGCAAAAGGTAGCATATaGTGGATGAGGTGTGTATCTCAGTCGACTCTGAGGAATGTACGA +
Preference number: 5 (lower is better)
Translates to: GVLPPVLLWPAKGSI*WMRCVSQSTLRNVR
Trigger: TCGTACATTCCTCAGAGTCGACTGAGATACACACCTCATCCAGCATATGCTACCTTTTGCAGGCCAAAGGAGAACTGGTGGCAGTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518107.5
ENST00000518573.1
ENST00000518827.1
ENST00000520614.1
ENST00000520728.5
ENST00000521144.1
CDS GCA 90 bp CTGCAAGCAGGTTGCTGCACTTCTCCGGTCCTCAATGGGTGCATTTaGAGGCAGCTGATTGCTGTCAAATCCAAGGATAGAACTGACATT +
Preference number: 5 (lower is better)
Translates to: LQAGCCTSPVLNGCI*RQLIAVKSKDRTDI
Trigger: AATGTCAGTTCTATCCTTGGATTTGACAGCAATCAGCTGCCTGCAAATGCACCCATTGAGGACCGGAGAAGTGCAGCAACCTGCTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS GCA 90 bp GTCAACACCATCCACATGGGCCACACAAGCAGTGGCTCCAGAAAATaGCACTCGAAGCACCAGGTAGTTGAGAAAAGAATTAGGATCACC +
Preference number: 5 (lower is better)
Translates to: VNTIHMGHTSSGSRK*HSKHQVVEKRIRIT
Trigger: GGTGATCCTAATTCTTTTCTCAACTACCTGGTGCTTCGAGTGGCATTTTCTGGAGCCACTGCTTGTGTGGCCCATGTGGATGGTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CCA 90 bp GGAAGCATATCTCCTTCCTTGGGTGTACTGCCACCAGTTCTCCTTTaGCCTGCAAAAGGTAGCATATGCTGGATGAGGTGTGTATCTCAG +
Preference number: 5 (lower is better)
Translates to: GSISPSLGVLPPVLL*PAKGSICWMRCVSQ
Trigger: CTGAGATACACACCTCATCCAGCATATGCTACCTTTTGCAGGCCAAAGGAGAACTGGTGGCAGTACACCCAAGGAAGGAGATATGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518107.5
ENST00000518573.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS CCA 90 bp ATGGCATCAGCAAGCCAAGCAGCCGATCCTGTTTCACGACACTCTTaGCCTCACTCTTTGGATGTTCCAATTTCAGCCGTTCTAGTTCTC +
Preference number: 5 (lower is better)
Translates to: MASASQAADPVSRHS*PHSLDVPISAVLVL
Trigger: GAGAACTAGAACGGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAACAGGATCGGCTGCTTGGCTTGCTGATGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATAGCATATCTCCTTCCTaGGGTGTACTGCCACCAGTT +
Preference number: 5 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDSISPS*GVLPPV
Trigger: AACTGGTGGCAGTACACCCAAGGAAGGAGATATGCT...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACCGCCCCCTCACAACTTaGGACGGGTGGAGGATCCCG +
Preference number: 5 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHRPLTT*DGWRIP
Trigger: CGGGATCCTCCACCCGTCCAAAGTTGTGAGGGGGCG...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396200.3
CDS TCA 90 bp TGCTGGATGAGGTGTGTATCTCAGTCGACTCTGAGGAATGTACGATaGGGAACAACAGAGATGTTTGTGGTGGCAGTAACATGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: CWMRCVSQSTLRNVR*GTTEMFVVAVTCSA
Trigger: GGCACTGCATGTTACTGCCACCACAAACATCTCTGTTGTTCCTCATCGTACATTCCTCAGAGTCGACTGAGATACACACCTCATCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518107.5
ENST00000518573.1
ENST00000518827.1
ENST00000520614.1
ENST00000520728.5
ENST00000521144.1
CDS-3UTR CAA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGCTTTAAGGATGCTATaGACTTGTGGAGGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDALRML*TCGGVR
Trigger: CCTCACACCTCCACAAGTCAATAGCATCCTTAAAGC...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAACAGTCCCAAACTCGTaGTTGCCCACAGCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHETVPNS*LPTAWR
Trigger: TCGCCACGCTGTGGGCAACAACGAGTTTGGGACTGT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS TCA 90 bp TCGTTGTTGCCCACAGCGTGGCGAATGAGATGGGTTGCTGCGTTCTaGTCCTCAAATACCGAGGACATTTTGGTTCTCCTTTCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: SLLPTAWRMRWVAAF*SSNTEDILVLLSVK
Trigger: TTTAACAGAAAGGAGAACCAAAATGTCCTCGGTATTTGAGGATCAGAACGCAGCAACCCATCTCATTCGCCACGCTGTGGGCAACAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CCA 90 bp CAGATTCACTTCCCCAGTTCGCTCTCACTCTCTTCTCTCTCCCCTTaGAGTGAGAGGTGTCCTGAAATTGGTTCTGGATACTTGGAATAT +
Preference number: 5 (lower is better)
Translates to: QIHFPSSLSLSSLSP*SERCPEIGSGYLEY
Trigger: ATATTCCAAGTATCCAGAACCAATTTCAGGACACCTCTCACTCCAAGGGGAGAGAGAAGAGAGTGAGAGCGAACTGGGGAAGTGAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523021.1
CDS-3UTR CAA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGATGGTCTGCAAGCAGGTaGCTGCACTTCTCCGGTCCT +
Preference number: 5 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARWSASR*LHFSGP
Trigger: AGGACCGGAGAAGTGCAGCAACCTGCTTGCAGACCA...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCACAGTCCCAAACTCGTaGTTGCCCACAGCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLTVPNS*LPTAWR
Trigger: TCGCCACGCTGTGGGCAACAACGAGTTTGGGACTGT...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTGGTCTGCAAGCAGGTaGCTGCACTTCTCCGGTCCT +
Preference number: 5 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCWSASR*LHFSGP
Trigger: AGGACCGGAGAAGTGCAGCAACCTGCTTGCAGACCA...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTGGTCTGCAAGCAGGTaGCTGCACTTCTCCGGTCCT +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCWSASR*LHFSGP
Trigger: AGGACCGGAGAAGTGCAGCAACCTGCTTGCAGACCA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAGCCACCAACAGCTATaGGCTGTTGGTGATGCATGC +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHESHQQL*AVGDAC
Trigger: GCATGCATCACCAACAGCCAATAGCTGTTGGTGGCT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGTCCCAAACTCGTTGTaGCCCACAGCGTGGCGAATG +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCVPNSL*PTAWRM
Trigger: CATTCGCCACGCTGTGGGCAACAACGAGTTTGGGAC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGCAGCACCGGCCCATaGAAAGCAAGGCAGAGATGC +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCSSTGP*KARQRC
Trigger: GCATCTCTGCCTTGCTTTCAATGGGCCGGTGCTGCT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517764.1
CDS CCA 90 bp AAGGTCAATGCTCCATTTGAACTTTACATCTCCAAATGCCCTAAATaGCATCAGCAAGCCAAGCAGCCGATCCTGTTTCACGACACTCTT +
Preference number: 5 (lower is better)
Translates to: KVNAPFELYISKCPK*HQQAKQPILFHDTL
Trigger: AAGAGTGTCGTGAAACAGGATCGGCTGCTTGGCTTGCTGATGCCATTTAGGGCATTTGGAGATGTAAAGTTCAAATGGAGCATTGACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAGCATATCTCCTTCCTaGGGTGTACTGCCACCAGTT +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHESISPS*GVLPPV
Trigger: AACTGGTGGCAGTACACCCAAGGAAGGAGATATGCT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGTCGACTCACCAGTGTaGAGGTCTATAAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEVDSPV*RSISSC
Trigger: GCAAGAGCTTATAGACCTCAACACTGGTGAGTCGAC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATTCATTATCAAGCCTCTaGAAGGCATTAATTAGAGCC +
Preference number: 5 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDSLSSL*KALIRA
Trigger: GGCTCTAATTAATGCCTTCAAGAGGCTTGATAATGA...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAATTAGGATCACCAACTaGCGCCTCCAAGGAGATGTC +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEIRITN*RLQGDV
Trigger: GACATCTCCTTGGAGGCGCAAGTTGGTGATCCTAAT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGGAACAAAATGCCACTaGATGCATATCAAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDGTKCH*MHIKKP
Trigger: TGGCTTTTTGATATGCATCAAGTGGCATTTTGTTCC...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS GCA 90 bp AAGCTCTTGCCAGTAAGTCCTCAAGCTGTTAAAGTACAATTTGGATaGCTCCTTACTAAAGTAATCATTGGGGTGCTTGTGCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: KLLPVSPQAVKVQFG*LLTKVIIGVLVPLE
Trigger: CTCCAGTGGCACAAGCACCCCAATGATTACTTTAGTAAGGAGGCATCCAAATTGTACTTTAACAGCTTGAGGACTTACTGGCAAGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518827.1
ENST00000520728.5
CDS CCA 90 bp TTTAAGGATGCTATTGACTTGTGGAGGTGTGAGGTAAAATTTCTGTaGTGTGGAAGCATATCTCCTTCCTTGGGTGTACTGCCACCAGTT +
Preference number: 5 (lower is better)
Translates to: FKDAIDLWRCEVKFL*CGSISPSLGVLPPV
Trigger: AACTGGTGGCAGTACACCCAAGGAAGGAGATATGCTTCCACACCACAGAAATTTTACCTCACACCTCCACAAGTCAATAGCATCCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518573.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS CCA 90 bp TCCTTTGTGCAGTACAAACTGTGCAGAATGTACAACAGATTTGGCTaGGGAAAGCCCAGTAGATGGTCTTGCAAAACTTGCTTCTCTAGT +
Preference number: 5 (lower is better)
Translates to: SFVQYKLCRMYNRFG*GKPSRWSCKTCFSS
Trigger: ACTAGAGAAGCAAGTTTTGCAAGACCATCTACTGGGCTTTCCCCAGCCAAATCTGTTGTACATTCTGCACAGTTTGTACTGCACAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518827.1
CDS CCA 90 bp TCTCCCCTTGGAGTGAGAGGTGTCCTGAAATTGGTTCTGGATACTTaGAATATTTTCTCTTGCATCTCAAAGCCTCAGTTGGAACAAGCA +
Preference number: 5 (lower is better)
Translates to: SPLGVRGVLKLVLDT*NIFSCISKPQLEQA
Trigger: TGCTTGTTCCAACTGAGGCTTTGAGATGCAAGAGAAAATATTCCAAGTATCCAGAACCAATTTCAGGACACCTCTCACTCCAAGGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523021.1
CDS-3UTR CAA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGAAGCATATCTCCTTCCTaGGGTGTACTGCCACCAGTT +
Preference number: 5 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARSISPS*GVLPPV
Trigger: AACTGGTGGCAGTACACCCAAGGAAGGAGATATGCT...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTCCTCAATGGGTGCATTaGCAGGCAGCTGATTGCTGT +
Preference number: 5 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCPQWVH*QAADCC
Trigger: ACAGCAATCAGCTGCCTGCAAATGCACCCATTGAGG...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCCCTCAATGGGTGCATTaGCAGGCAGCTGATTGCTGT +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCPQWVH*QAADCC
Trigger: ACAGCAATCAGCTGCCTGCAAATGCACCCATTGAGG...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTTGGTCTGCAAGCAGGTaGCTGCACTTCTCCGGTCCT +
Preference number: 5 (lower is better)
Translates to: HAINICSHVHWNLSEERCWSASR*LHFSGP
Trigger: AGGACCGGAGAAGTGCAGCAACCTGCTTGCAGACCA...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp GGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATCTGTTAAAGTACAATTaGGATGCCTCCTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: GMPSLWGLHKSDVLVATDLLKYN*DASLLK
Trigger: CTTTAGTAAGGAGGCATCCAAATTGTACTTTAACAG...ATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAGAGGTCTATAAGCTCTaGCCAGTAAGTCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEEVYKL*PVSPQA
Trigger: AGCTTGAGGACTTACTGGCAAGAGCTTATAGACCTC...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGAGTCGACTCACCAGTGTaGAGGTCTATAAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARVDSPV*RSISSC
Trigger: GCAAGAGCTTATAGACCTCAACACTGGTGAGTCGAC...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAATGTTTCACGACACTCTaGGCCTCACTCTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHECFTTL*ASLFGC
Trigger: ACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAACA...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp ATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTACTGTAGCCACCAACAGCTATaGGCTGTTGGTGATGCATGC +
Preference number: 5 (lower is better)
Translates to: ICSHVHWNLSEERCEQYCSHQQL*AVGDAC
Trigger: GCATGCATCACCAACAGCCAATAGCTGTTGGTGGCT...ACAGTACTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACAGCCACCAACAGCTATaGGCTGTTGGTGATGCATGC +
Preference number: 5 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHSHQQL*AVGDAC
Trigger: GCATGCATCACCAACAGCCAATAGCTGTTGGTGGCT...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGGTCCCAAACTCGTTGTaGCCCACAGCGTGGCGAATG +
Preference number: 5 (lower is better)
Translates to: LSLFSIETNSAANSTLIQVPNSL*PTAWRM
Trigger: CATTCGCCACGCTGTGGGCAACAACGAGTTTGGGAC...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGTCCCAAACTCGTTGTaGCCCACAGCGTGGCGAATG +
Preference number: 5 (lower is better)
Translates to: HAINICSHVHWNLSEERCVPNSL*PTAWRM
Trigger: CATTCGCCACGCTGTGGGCAACAACGAGTTTGGGAC...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGGTCCCAAACTCGTTGTaGCCCACAGCGTGGCGAATG +
Preference number: 5 (lower is better)
Translates to: INICSHVHWNLSEERCEQVPNSL*PTAWRM
Trigger: CATTCGCCACGCTGTGGGCAACAACGAGTTTGGGAC...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGACAGTCCCAAACTCGTaGTTGCCCACAGCGTGGCGA +
Preference number: 5 (lower is better)
Translates to: INICSHVHWNLSEERCEQTVPNS*LPTAWR
Trigger: TCGCCACGCTGTGGGCAACAACGAGTTTGGGACTGT...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAGCCACTCACTATTCTaGGTTTTGATACGCCCCTAC +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHESHSLF*VLIRPY
Trigger: GTAGGGGCGTATCAAAACCAAGAATAGTGAGTGGCT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp CACACACTTACGGCATGCCAAGCCTTTGGGGATTACATAAGAGTGATGTGCTGGAATGGGAAGCTGATATaGGCTTGTATTAAAATCCAG +
Preference number: 5 (lower is better)
Translates to: HTLTACQAFGDYIRVMCWNGKLI*ACIKIQ
Trigger: CTGGATTTTAATACAAGCCAATATCAGCTTCCCATT...CCAGCACATCACTCTTATGTAATCCCCAAAGGCTTGGCATGCCGTAAGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGCATATCTCCTTCCTaGGGTGTACTGCCACCAGTT +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCSISPS*GVLPPV
Trigger: AACTGGTGGCAGTACACCCAAGGAAGGAGATATGCT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGTCGACTCACCAGTGTaGAGGTCTATAAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCVDSPV*RSISSC
Trigger: GCAAGAGCTTATAGACCTCAACACTGGTGAGTCGAC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACGTCGACTCACCAGTGTaGAGGTCTATAAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHVDSPV*RSISSC
Trigger: GCAAGAGCTTATAGACCTCAACACTGGTGAGTCGAC...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCATTAGGATCACCAACTaGCGCCTCCAAGGAGATGTC +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCIRITN*RLQGDV
Trigger: GACATCTCCTTGGAGGCGCAAGTTGGTGATCCTAAT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACACAGCAAGAAGCCACTCACTATTCTaGGTTTTGATACGCCCCTAC +
Preference number: 5 (lower is better)
Translates to: RCEQYCFFTLTKRLHTARSHSLF*VLIRPY
Trigger: GTAGGGGCGTATCAAAACCAAGAATAGTGAGTGGCT...TCTTGCTGTGTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGCTTTAAGGATGCTATaGACTTGTGGAGGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCALRML*TCGGVR
Trigger: CCTCACACCTCCACAAGTCAATAGCATCCTTAAAGC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGACTACACGCTTTAAGGATGCTATaGACTTGTGGAGGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: SEERCEQYCFFTLTKRLHALRML*TCGGVR
Trigger: CCTCACACCTCCACAAGTCAATAGCATCCTTAAAGC...GTGTAGTCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATCCTCAATGGGTGCATTaGCAGGCAGCTGATTGCTGT +
Preference number: 5 (lower is better)
Translates to: HNGKLILACIKIQVNIKHPQWVH*QAADCC
Trigger: ACAGCAATCAGCTGCCTGCAAATGCACCCATTGAGG...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGAGGTCTATAAGCTCTaGCCAGTAAGTCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCEVYKL*PVSPQA
Trigger: AGCTTGAGGACTTACTGGCAAGAGCTTATAGACCTC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAATTAGGATCACCAACTaGCGCCTCCAAGGAGATGTC +
Preference number: 5 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRIRITN*RLQGDV
Trigger: GACATCTCCTTGGAGGCGCAAGTTGGTGATCCTAAT...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACTCTTGGCCTCACTCTTaGGATGTTCCAATTTCAGCC +
Preference number: 5 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHSWPHS*DVPISA
Trigger: GGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAGA...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTCTTGGCCTCACTCTTaGGATGTTCCAATTTCAGCC +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCSWPHS*DVPISA
Trigger: GGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAGA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAATGTTTCACGACACTCTaGGCCTCACTCTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIECFTTL*ASLFGC
Trigger: ACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAACA...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTAGCCACCAACAGCTATaGGCTGTTGGTGATGCATGC +
Preference number: 5 (lower is better)
Translates to: HAINICSHVHWNLSEERCSHQQL*AVGDAC
Trigger: GCATGCATCACCAACAGCCAATAGCTGTTGGTGGCT...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGCCACTCACTATTCTaGGTTTTGATACGCCCCTAC +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCSHSLF*VLIRPY
Trigger: GTAGGGGCGTATCAAAACCAAGAATAGTGAGTGGCT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACAGATTGCTTGGATCTaGGTCATTTATGGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEQIAWI*VIYGLK
Trigger: CTTCAAGCCATAAATGACCAAGATCCAAGCAATCTG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS TCA 90 bp TCATTGTCATTCAACTGGTCTGGGCCAGATTCTATCACTCTCTTTTaGAGGTCAATGCTCCATTTGAACTTTACATCTCCAAATGCCCTA +
Preference number: 5 (lower is better)
Translates to: SLSFNWSGPDSITLF*RSMLHLNFTSPNAL
Trigger: TAGGGCATTTGGAGATGTAAAGTTCAAATGGAGCATTGACCTTCAAAAGAGAGTGATAGAATCTGGCCCAGACCAGTTGAATGACAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS GCA 90 bp TTCCACAGTTTGTTTATGCATGCAGGCGTCAGTGATCACTTAGGTTaGTTCCATATTTTGACTATTGTGAATAATGCTGCCATGAACGTG +
Preference number: 5 (lower is better)
Translates to: FHSLFMHAGVSDHLG*FHILTIVNNAAMNV
Trigger: CACGTTCATGGCAGCATTATTCACAATAGTCAAAATATGGAAGCAACCTAAGTGATCACTGACGCCTGCATGCATAAACAAACTGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523021.1
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAATAGAACTGACATTTTaGCCGTCAAATTCTGGCACT +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHEIELTF*PSNSGT
Trigger: AGTGCCAGAATTTGACGGCAAAAATGTCAGTTCTAT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAGAGGTCTATAAGCTCTaGCCAGTAAGTCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: NLSEERCEQYCFFTLTKREVYKL*PVSPQA
Trigger: AGCTTGAGGACTTACTGGCAAGAGCTTATAGACCTC...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCCACACAGCAAGATACTaGCTTTTGGCCTATTCAAGA +
Preference number: 5 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLHTARY*LLAYSR
Trigger: TCTTGAATAGGCCAAAAGCAAGTATCTTGCTGTGTG...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAAGGATGCTATTGACTaGTGGAGGTGTGAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCKDAID*WRCEVK
Trigger: TTTTACCTCACACCTCCACAAGTCAATAGCATCCTT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGCTTTAAGGATGCTATaGACTTGTGGAGGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: HAINICSHVHWNLSEERCALRML*TCGGVR
Trigger: CCTCACACCTCCACAAGTCAATAGCATCCTTAAAGC...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAACTGTTAAAGTACAATTaGGATGCCTCCTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHELLKYN*DASLLK
Trigger: CTTTAGTAAGGAGGCATCCAAATTGTACTTTAACAG...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAGGTCTATAAGCTCTaGCCAGTAAGTCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: HAINICSHVHWNLSEERCEVYKL*PVSPQA
Trigger: AGCTTGAGGACTTACTGGCAAGAGCTTATAGACCTC...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATTCTTGGCCTCACTCTTaGGATGTTCCAATTTCAGCC +
Preference number: 5 (lower is better)
Translates to: HNGKLILACIKIQVNIKHSWPHS*DVPISA
Trigger: GGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAGA...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGTCTTGGCCTCACTCTTaGGATGTTCCAATTTCAGCC +
Preference number: 5 (lower is better)
Translates to: INICSHVHWNLSEERCEQSWPHS*DVPISA
Trigger: GGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAGA...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGTTTCACGACACTCTaGGCCTCACTCTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNCFTTL*ASLFGC
Trigger: ACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAACA...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAGGTCAATGCTCCATTaGAACTTTACATCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHERSMLH*NFTSPN
Trigger: ATTTGGAGATGTAAAGTTCAAATGGAGCATTGACCT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTGCCATGAAAATACCGAGGACATTTaGGTTCTCCTTTCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: FQDTCDKEVTCFKCRCHENTEDI*VLLSVK
Trigger: TTTAACAGAAAGGAGAACCAAAATGTCCTCGGTATT...TTCATGGCACCTGCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTCACTATTCTTGGTTTaGATACGCCCCTACAACATG +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCSLFLV*IRPYNM
Trigger: CATGTTGTAGGGGCGTATCAAAACCAAGAATAGTGA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATAGCCACTCACTATTCTaGGTTTTGATACGCCCCTAC +
Preference number: 5 (lower is better)
Translates to: HNGKLILACIKIQVNIKHSHSLF*VLIRPY
Trigger: GTAGGGGCGTATCAAAACCAAGAATAGTGAGTGGCT...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACCACACAGCAAGATACTaGCTTTTGGCCTATTCAAGA +
Preference number: 5 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHHTARY*LLAYSR
Trigger: TCTTGAATAGGCCAAAAGCAAGTATCTTGCTGTGTG...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAACAGATTGCTTGGATCTaGGTCATTTATGGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIEQIAWI*VIYGLK
Trigger: CTTCAAGCCATAAATGACCAAGATCCAAGCAATCTG...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCATAGAACTGACATTTTaGCCGTCAAATTCTGGCACT +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCIELTF*PSNSGT
Trigger: AGTGCCAGAATTTGACGGCAAAAATGTCAGTTCTAT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCTCATTATCAAGCCTCTaGAAGGCATTAATTAGAGCC +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCSLSSL*KALIRA
Trigger: GGCTCTAATTAATGCCTTCAAGAGGCTTGATAATGA...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp TTTGGGGATTACATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAAACTTGGTATATTCATaGTCATTCAACTGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: FGDYIRVMCWWLQMTIIENLVYS*SFNWSG
Trigger: CCCAGACCAGTTGAATGACAATGAATATACCAAGTT...TTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTATGTAATCCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAACTTGGTATATTCATaGTCATTCAACTGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCNLVYS*SFNWSG
Trigger: CCCAGACCAGTTGAATGACAATGAATATACCAAGTT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp ATAAGAGTGATGTGCTGGTGGCTACAGATGACAATAATTGAAGAGATCAGTCTCGCAAGATACTTGCTTTaGGCCTATTCAAGATCTTAT +
Preference number: 5 (lower is better)
Translates to: IRVMCWWLQMTIIEEISLARYLL*AYSRSY
Trigger: ATAAGATCTTGAATAGGCCAAAAGCAAGTATCTTGC...GAGACTGATCTCTTCAATTATTGTCATCTGTAGCCACCAGCACATCACTCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp AATCTCAGTGAAGAAAGGTGTGAACAGTACTGTTTCTTCACTTTAACCAAGAGAATAGAACTGACATTTTaGCCGTCAAATTCTGGCACT +
Preference number: 5 (lower is better)
Translates to: NLSEERCEQYCFFTLTKRIELTF*PSNSGT
Trigger: AGTGCCAGAATTTGACGGCAAAAATGTCAGTTCTAT...TCTCTTGGTTAAAGTGAAGAAACAGTACTGTTCACACCTTTCTTCACTGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAGGTCAATGCTCCATTaGAACTTTACATCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCRSMLH*NFTSPN
Trigger: ATTTGGAGATGTAAAGTTCAAATGGAGCATTGACCT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp CCAGGTCATCCTAATTTTCTCAGGTTGGTAAAAGAAGCTAATGTTTCAAGACACAGGTCAATGCTCCATTaGAACTTTACATCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: PGHPNFLRLVKEANVSRHRSMLH*NFTSPN
Trigger: ATTTGGAGATGTAAAGTTCAAATGGAGCATTGACCT...GTGTCTTGAAACATTAGCTTCTTTTACCAACCTGAGAAAATTAGGATGACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCAATACCGAGGACATTTaGGTTCTCCTTTCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCNTEDI*VLLSVK
Trigger: TTTAACAGAAAGGAGAACCAAAATGTCCTCGGTATT...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS-3UTR CAA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAATCACTATTCTTGGTTTaGATACGCCCCTACAACATG +
Preference number: 5 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKSLFLV*IRPYNM
Trigger: CATGTTGTAGGGGCGTATCAAAACCAAGAATAGTGA...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTCACTATTCTTGGTTTaGATACGCCCCTACAACATG +
Preference number: 5 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNSLFLV*IRPYNM
Trigger: CATGTTGTAGGGGCGTATCAAAACCAAGAATAGTGA...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AAGAAGCTAATGTTTCAAGACACCTGTGATAAAGAAGTGACTTGCTTCAAGTGCGCAAGATACTTGCTTTaGGCCTATTCAAGATCTTAT +
Preference number: 5 (lower is better)
Translates to: KKLMFQDTCDKEVTCFKCARYLL*AYSRSY
Trigger: ATAAGATCTTGAATAGGCCAAAAGCAAGTATCTTGC...GCACTTGAAGCAAGTCACTTCTTTATCACAGGTGTCTTGAAACATTAGCTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATCACACAGCAAGATACTaGCTTTTGGCCTATTCAAGA +
Preference number: 5 (lower is better)
Translates to: HNGKLILACIKIQVNIKHHTARY*LLAYSR
Trigger: TCTTGAATAGGCCAAAAGCAAGTATCTTGCTGTGTG...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGCAGATTGCTTGGATCTaGGTCATTTATGGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: INICSHVHWNLSEERCEQQIAWI*VIYGLK
Trigger: CTTCAAGCCATAAATGACCAAGATCCAAGCAATCTG...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTATAGAACTGACATTTTaGCCGTCAAATTCTGGCACT +
Preference number: 5 (lower is better)
Translates to: HAINICSHVHWNLSEERCIELTF*PSNSGT
Trigger: AGTGCCAGAATTTGACGGCAAAAATGTCAGTTCTAT...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp CTGAGTCTATTTTCAATTGAAACAAATTCTGCAGCCAATAGTACACTGATTCAGTCATTATCAAGCCTCTaGAAGGCATTAATTAGAGCC +
Preference number: 5 (lower is better)
Translates to: LSLFSIETNSAANSTLIQSLSSL*KALIRA
Trigger: GGCTCTAATTAATGCCTTCAAGAGGCTTGATAATGA...CTGAATCAGTGTACTATTGGCTGCAGAATTTGTTTCAATTGAAAATAGACTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAATCATTATCAAGCCTCTaGAAGGCATTAATTAGAGCC +
Preference number: 5 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKSLSSL*KALIRA
Trigger: GGCTCTAATTAATGCCTTCAAGAGGCTTGATAATGA...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAAAACTTGGTATATTCATaGTCATTCAACTGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKNLVYS*SFNWSG
Trigger: CCCAGACCAGTTGAATGACAATGAATATACCAAGTT...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACGACTGCTGCAAACATTaGATGCCACTAAGTATTCTA +
Preference number: 5 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNDCCKH*MPLSIL
Trigger: TAGAATACTTAGTGGCATCAAATGTTTGCAGCAGTC...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp ATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTGAACAGGGAACAAAATGCCACTaGATGCATATCAAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: INICSHVHWNLSEERCEQGTKCH*MHIKKP
Trigger: TGGCTTTTTGATATGCATCAAGTGGCATTTTGTTCC...CTGTTCACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp CATGCAATAAATATATGTTCTCATGTACACTGGAATCTCAGTGAAGAAAGGTGTCTGTTAAAGTACAATTaGGATGCCTCCTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: HAINICSHVHWNLSEERCLLKYN*DASLLK
Trigger: CTTTAGTAAGGAGGCATCCAAATTGTACTTTAACAG...ACACCTTTCTTCACTGAGATTCCAGTGTACATGAGAACATATATTTATTGCATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAACTGTTAAAGTACAATTaGGATGCCTCCTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKLLKYN*DASLLK
Trigger: CTTTAGTAAGGAGGCATCCAAATTGTACTTTAACAG...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp CACAATGGGAAGCTGATATTGGCTTGTATTAAAATCCAGGTGAATATCAAACATAGGTCAATGCTCCATTaGAACTTTACATCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: HNGKLILACIKIQVNIKHRSMLH*NFTSPN
Trigger: ATTTGGAGATGTAAAGTTCAAATGGAGCATTGACCT...ATGTTTGATATTCACCTGGATTTTAATACAAGCCAATATCAGCTTCCCATTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS-3UTR CAA 90 bp AATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACTGGATTTGAAAAATACCGAGGACATTTaGGTTCTCCTTTCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: NSDCLDLGHLWLEELDLKNTEDI*VLLSVK
Trigger: TTTAACAGAAAGGAGAACCAAAATGTCCTCGGTATT...TTTCAAATCCAGTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACAATACCGAGGACATTTaGGTTCTCCTTTCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNNTEDI*VLLSVK
Trigger: TTTAACAGAAAGGAGAACCAAAATGTCCTCGGTATT...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACGCAAGATACTTGCTTTaGGCCTATTCAAGATCTTAT +
Preference number: 5 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNARYLL*AYSRSY
Trigger: ATAAGATCTTGAATAGGCCAAAAGCAAGTATCTTGC...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000520728.5
CDS-3UTR CAA 90 bp TCACAAAAACAAATTCAGATTGCTTGGATCTTGGTCATTTATGGCTTGAAGAACAATGGGAAGCTGATATaGGCTTGTATTAAAATCCAG +
Preference number: 5 (lower is better)
Translates to: SQKQIQIAWILVIYGLKNNGKLI*ACIKIQ
Trigger: CTGGATTTTAATACAAGCCAATATCAGCTTCCCATT...GTTCTTCAAGCCATAAATGACCAAGATCCAAGCAATCTGAATTTGTTTTTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297598.5
ENST00000396200.3
CDS CAA 90 bp CCGCGGCCGCCGATCCGCGAGCACGCCCGGCGCCCCCTCACAACTTaGGACGGGTGGAGGATCCCGGACGGGGCGGCTCGTGGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: PRPPIREHARRPLTT*DGWRIPDGAARGRE
Trigger: CTCCCTGCCACGAGCCGCCCCGTCCGGGATCCTCCACCCGTCCAAAGTTGTGAGGGGGCGCCGGGCGTGCTCGCGGATCGGCGGCCGCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396200.3
ENST00000518107.5
ENST00000518573.1
CDS GCA 72 bp GACGCCACCGCTCGGCGCTCTTTCCACGCAGCCCCGTaGAGCTCCCGGAGCGCGAGCCCTCACCCCCGGCCT +
Preference number: 6 (lower is better)
Translates to: DATARRSFHAAP*SSRSASPHPRP
Trigger: AGGCCGGGGGTGAGGGCTCGCGCTCCGGGAGCTGCACGGGGCTGCGTGGAAAGAGCGCCGAGCGGTGGCGTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000518107.5
ENST00000520728.5
CDS GCA 72 bp CCGCCACCCTGCCCCGCCCGCACGTTCGGGCCGGAGTaGTTCCCGCCTGCCGATTGGCTGCGCAGTGACGAG +
Preference number: 6 (lower is better)
Translates to: PPPCPARTFGPE*FPPADWLRSDE
Trigger: CTCGTCACTGCGCAGCCAATCGGCAGGCGGGAAGCACTCCGGCCCGAACGTGCGGGCGGGGCAGGGTGGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520614.1
CDS CCA 72 bp GAGCACGCCCGGCGCCCCCTCACAACTTTGGACGGGTaGAGGATCCCGGACGGGGCGGCTCGTGGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: EHARRPLTTLDG*RIPDGAARGRE
Trigger: CTCCCTGCCACGAGCCGCCCCGTCCGGGATCCTCCACCCGTCCAAAGTTGTGAGGGGGCGCCGGGCGTGCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396200.3
ENST00000518107.5
ENST00000518573.1
CDS CCA 72 bp CGATCCGCGAGCACGCCCGGCGCCCCCTCACAACTTTaGACGGGTGGAGGATCCCGGACGGGGCGGCTCGTG +
Preference number: 6 (lower is better)
Translates to: RSASTPGAPSQL*TGGGSRTGRLV
Trigger: CACGAGCCGCCCCGTCCGGGATCCTCCACCCGTCCAAAGTTGTGAGGGGGCGCCGGGCGTGCTCGCGGATCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396200.3
ENST00000518107.5
ENST00000518573.1
CDS CAA 72 bp CCGATCCGCGAGCACGCCCGGCGCCCCCTCACAACTTaGGACGGGTGGAGGATCCCGGACGGGGCGGCTCGT +
Preference number: 6 (lower is better)
Translates to: PIREHARRPLTT*DGWRIPDGAAR
Trigger: ACGAGCCGCCCCGTCCGGGATCCTCCACCCGTCCAAAGTTGTGAGGGGGCGCCGGGCGTGCTCGCGGATCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396200.3
ENST00000518107.5
ENST00000518573.1
CDS CCA 72 bp TTTGGACGGGTGGAGGATCCCGGACGGGGCGGCTCGTaGCAGGGAGTAGGGAATACGAACCGGGCACGGCAG +
Preference number: 6 (lower is better)
Translates to: FGRVEDPGRGGS*QGVGNTNRARQ
Trigger: CTGCCGTGCCCGGTTCGTATTCCCTACTCCCTGCCACGAGCCGCCCCGTCCGGGATCCTCCACCCGTCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396200.3
ENST00000518107.5
ENST00000518573.1
CDS GCA 72 bp GACAGCGTGACTGCTGACCATGAGCCGTCCTCTTCCTaGACACCCAGCATGGCTCTGCTATCGCCAGTATTG +
Preference number: 6 (lower is better)
Translates to: DSVTADHEPSSS*TPSMALLSPVL
Trigger: CAATACTGGCGATAGCAGAGCCATGCTGGGTGTGCAGGAAGAGGACGGCTCATGGTCAGCAGTCACGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS GCA 72 bp CCCCAAAAGCATCCCTCTGGTCTGCAAGCAGGTTGCTaGACTTCTCCGGTCCTCAATGGGTGCATTTGCAGG +
Preference number: 6 (lower is better)
Translates to: PQKHPSGLQAGC*TSPVLNGCICR
Trigger: CCTGCAAATGCACCCATTGAGGACCGGAGAAGTGCAGCAACCTGCTTGCAGACCAGAGGGATGCTTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS CCA 72 bp CCTGCACACCCAGCATGGCTCTGCTATCGCCAGTATTaGCCACATGAAGGTCAACACCATCCACATGGGCCA +
Preference number: 6 (lower is better)
Translates to: PAHPAWLCYRQY*PHEGQHHPHGP
Trigger: TGGCCCATGTGGATGGTGTTGACCTTCATGTGGCCAATACTGGCGATAGCAGAGCCATGCTGGGTGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS GCA 72 bp AACCCCCAAAAGCATCCCTCTGGTCTGCAAGCAGGTTaGTGCACTTCTCCGGTCCTCAATGGGTGCATTTGC +
Preference number: 6 (lower is better)
Translates to: NPQKHPSGLQAG*CTSPVLNGCIC
Trigger: GCAAATGCACCCATTGAGGACCGGAGAAGTGCAGCAACCTGCTTGCAGACCAGAGGGATGCTTTTGGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS CCA 72 bp GAAGGTCAACACCATCCACATGGGCCACACAAGCAGTaGCTCCAGAAAATGCCACTCGAAGCACCAGGTAGT +
Preference number: 6 (lower is better)
Translates to: EGQHHPHGPHKQ*LQKMPLEAPGS
Trigger: ACTACCTGGTGCTTCGAGTGGCATTTTCTGGAGCCACTGCTTGTGTGGCCCATGTGGATGGTGTTGACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CAA 90 bp GGCCATGCATCTGTCCCAGAGTCACCTTGTAGCCACCAACAGCTATaGGCTGTTGGTGATGCATGCCAGTTAGGTACTCACCCACAATCC +
Preference number: 6 (lower is better)
Translates to: GHASVPESPCSHQQL*AVGDACQLGTHPQS
Trigger: GGATTGTGGGTGAGTACCTAACTGGCATGCATCACCAACAGCCAATAGCTGTTGGTGGCTACAAGGTGACTCTGGGACAGATGCATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CCA 72 bp TCTGCAAGCAGGTTGCTGCACTTCTCCGGTCCTCAATaGGTGCATTTGCAGGCAGCTGATTGCTGTCAAATC +
Preference number: 6 (lower is better)
Translates to: SASRLLHFSGPQ*VHLQAADCCQI
Trigger: GATTTGACAGCAATCAGCTGCCTGCAAATGCACCCATTGAGGACCGGAGAAGTGCAGCAACCTGCTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS TCA 72 bp CCCACAGCGTGGCGAATGAGATGGGTTGCTGCGTTCTaGTCCTCAAATACCGAGGACATTTTGGTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: PTAWRMRWVAAF*SSNTEDILVLL
Trigger: AAGGAGAACCAAAATGTCCTCGGTATTTGAGGATCAGAACGCAGCAACCCATCTCATTCGCCACGCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS GCA 72 bp CCACCAGTTCTCCTTTGGCCTGCAAAAGGTAGCATATaGTGGATGAGGTGTGTATCTCAGTCGACTCTGAGG +
Preference number: 6 (lower is better)
Translates to: PPVLLWPAKGSI*WMRCVSQSTLR
Trigger: CCTCAGAGTCGACTGAGATACACACCTCATCCAGCATATGCTACCTTTTGCAGGCCAAAGGAGAACTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518107.5
ENST00000518573.1
ENST00000518827.1
ENST00000520614.1
ENST00000520728.5
ENST00000521144.1
CDS GCA 72 bp GGTTGCTGCACTTCTCCGGTCCTCAATGGGTGCATTTaGAGGCAGCTGATTGCTGTCAAATCCAAGGATAGA +
Preference number: 6 (lower is better)
Translates to: GCCTSPVLNGCI*RQLIAVKSKDR
Trigger: TCTATCCTTGGATTTGACAGCAATCAGCTGCCTGCAAATGCACCCATTGAGGACCGGAGAAGTGCAGCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS GCA 72 bp AGGTACTCACCCACAATCCTAACCACATCCTGCCTATaGATAGTCTCCCACAACCCATCAGTAGCCAACACC +
Preference number: 6 (lower is better)
Translates to: RYSPTILTTSCL*IVSHNPSVANT
Trigger: GGTGTTGGCTACTGATGGGTTGTGGGAGACTATGCATAGGCAGGATGTGGTTAGGATTGTGGGTGAGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CCA 72 bp GCAAGCCAAGCAGCCGATCCTGTTTCACGACACTCTTaGCCTCACTCTTTGGATGTTCCAATTTCAGCCGTT +
Preference number: 6 (lower is better)
Translates to: ASQAADPVSRHS*PHSLDVPISAV
Trigger: AACGGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAACAGGATCGGCTGCTTGGCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CCA 72 bp TTCCCCAGTTCGCTCTCACTCTCTTCTCTCTCCCCTTaGAGTGAGAGGTGTCCTGAAATTGGTTCTGGATAC +
Preference number: 6 (lower is better)
Translates to: FPSSLSLSSLSP*SERCPEIGSGY
Trigger: GTATCCAGAACCAATTTCAGGACACCTCTCACTCCAAGGGGAGAGAGAAGAGAGTGAGAGCGAACTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523021.1
CDS CAA 72 bp AGCAAGCCAAGCAGCCGATCCTGTTTCACGACACTCTaGGCCTCACTCTTTGGATGTTCCAATTTCAGCCGT +
Preference number: 6 (lower is better)
Translates to: SKPSSRSCFTTL*ASLFGCSNFSR
Trigger: ACGGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAACAGGATCGGCTGCTTGGCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CAA 72 bp TCTGTCCCAGAGTCACCTTGTAGCCACCAACAGCTATaGGCTGTTGGTGATGCATGCCAGTTAGGTACTCAC +
Preference number: 6 (lower is better)
Translates to: SVPESPCSHQQL*AVGDACQLGTH
Trigger: GTGAGTACCTAACTGGCATGCATCACCAACAGCCAATAGCTGTTGGTGGCTACAAGGTGACTCTGGGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CCA 72 bp AGATGGTCTTGCAAAACTTGCTTCTCTAGTCCACTGTaGCAATTTGCCAGGCTAACGGGCATAGGTCTGCCA +
Preference number: 6 (lower is better)
Translates to: RWSCKTCFSSPL*QFARLTGIGLP
Trigger: TGGCAGACCTATGCCCGTTAGCCTGGCAAATTGCCACAGTGGACTAGAGAAGCAAGTTTTGCAAGACCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518827.1
CDS CAA 90 bp AGGTGTGAGGTAAAATTTCTGTGGTGTGGAAGCATATCTCCTTCCTaGGGTGTACTGCCACCAGTTCTCCTTTGGCCTGCAAAAGGTAGC +
Preference number: 6 (lower is better)
Translates to: RCEVKFLWCGSISPS*GVLPPVLLWPAKGS
Trigger: GCTACCTTTTGCAGGCCAAAGGAGAACTGGTGGCAGTACACCCAAGGAAGGAGATATGCTTCCACACCACAGAAATTTTACCTCACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518573.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS CAA 90 bp AATGGCATCAGCAAGCCAAGCAGCCGATCCTGTTTCACGACACTCTaGGCCTCACTCTTTGGATGTTCCAATTTCAGCCGTTCTAGTTCT +
Preference number: 6 (lower is better)
Translates to: NGISKPSSRSCFTTL*ASLFGCSNFSRSSS
Trigger: AGAACTAGAACGGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAACAGGATCGGCTGCTTGGCTTGCTGATGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS TCA 72 bp TCTTCAGGAAGACTAAGCATTTTAGAGAGGCGCTCATaGTCAACAGTCCCAAACTCGTTGTTGCCCACAGCG +
Preference number: 6 (lower is better)
Translates to: SSGRLSILERRS*STVPNSLLPTA
Trigger: CGCTGTGGGCAACAACGAGTTTGGGACTGTTGATCATGAGCGCCTCTCTAAAATGCTTAGTCTTCCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS GCA 72 bp ATCCACATGGGCCACACAAGCAGTGGCTCCAGAAAATaGCACTCGAAGCACCAGGTAGTTGAGAAAAGAATT +
Preference number: 6 (lower is better)
Translates to: IHMGHTSSGSRK*HSKHQVVEKRI
Trigger: AATTCTTTTCTCAACTACCTGGTGCTTCGAGTGGCATTTTCTGGAGCCACTGCTTGTGTGGCCCATGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CAA 72 bp GTAAAATTTCTGTGGTGTGGAAGCATATCTCCTTCCTaGGGTGTACTGCCACCAGTTCTCCTTTGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: VKFLWCGSISPS*GVLPPVLLWPA
Trigger: TGCAGGCCAAAGGAGAACTGGTGGCAGTACACCCAAGGAAGGAGATATGCTTCCACACCACAGAAATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518573.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS CAA 90 bp TGCCAGGCTAACGGGCATAGGTCTGCCACCAACTCCCAAATAATCTaGGAAAAGTCAGCTCACATCTTTGAGTCTCACTCTTCTAACGTT +
Preference number: 6 (lower is better)
Translates to: CQANGHRSATNSQII*EKSAHIFESHSSNV
Trigger: AACGTTAGAAGAGTGAGACTCAAAGATGTGAGCTGACTTTTCCAAGATTATTTGGGAGTTGGTGGCAGACCTATGCCCGTTAGCCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518827.1
CDS CAA 90 bp TGCCAGGCTAACGGGCATAGGTCTGCCACCAACTCCCAAATAATCTaGGAAAAGTCAGCTCACATCTTTGAGTCTCACTCTTCTAACCTT +
Preference number: 6 (lower is better)
Translates to: CQANGHRSATNSQII*EKSAHIFESHSSNL
Trigger: AAGGTTAGAAGAGTGAGACTCAAAGATGTGAGCTGACTTTTCCAAGATTATTTGGGAGTTGGTGGCAGACCTATGCCCGTTAGCCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523021.1
CDS TCA 72 bp GCAGGCACAACTCCCAATCATTCGTGGAACCACGACTaGACTCCTGGCTCCTATACTCAAACTTCAATTTTC +
Preference number: 6 (lower is better)
Translates to: AGTTPNHSWNHD*TPGSYTQTSIF
Trigger: GAAAATTGAAGTTTGAGTATAGGAGCCAGGAGTTCAGTCGTGGTTCCACGAATGATTGGGAGTTGTGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518827.1
CDS CCA 72 bp GCTCCATTTGAACTTTACATCTCCAAATGCCCTAAATaGCATCAGCAAGCCAAGCAGCCGATCCTGTTTCAC +
Preference number: 6 (lower is better)
Translates to: APFELYISKCPK*HQQAKQPILFH
Trigger: GTGAAACAGGATCGGCTGCTTGGCTTGCTGATGCCATTTAGGGCATTTGGAGATGTAAAGTTCAAATGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CAA 72 bp GCCGATCCTGTTTCACGACACTCTTGGCCTCACTCTTaGGATGTTCCAATTTCAGCCGTTCTAGTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: ADPVSRHSWPHS*DVPISAVLVLF
Trigger: AAAGAGAACTAGAACGGCTGAAATTGGAACATCCAAAGAGTGAGGCCAAGAGTGTCGTGAAACAGGATCGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CAA 90 bp TGTCGTCCTTTGTGCAGTACAAACTGTGCAGAATGTACAACAGATTaGGCTGGGGAAAGCCCAGTAGATGGTCTTGCAAAACTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: CRPLCSTNCAECTTD*AGESPVDGLAKLAS
Trigger: AGAAGCAAGTTTTGCAAGACCATCTACTGGGCTTTCCCCAGCCAAATCTGTTGTACATTCTGCACAGTTTGTACTGCACAAAGGACGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518827.1
CDS TCA 72 bp AGGTGTGTATCTCAGTCGACTCTGAGGAATGTACGATaGGGAACAACAGAGATGTTTGTGGTGGCAGTAACA +
Preference number: 6 (lower is better)
Translates to: RCVSQSTLRNVR*GTTEMFVVAVT
Trigger: TGTTACTGCCACCACAAACATCTCTGTTGTTCCTCATCGTACATTCCTCAGAGTCGACTGAGATACACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518107.5
ENST00000518573.1
ENST00000518827.1
ENST00000520614.1
ENST00000520728.5
ENST00000521144.1
CDS CAA 72 bp AACGGGCATAGGTCTGCCACCAACTCCCAAATAATCTaGGAAAAGTCAGCTCACATCTTTGAGTCTCACTCT +
Preference number: 6 (lower is better)
Translates to: NGHRSATNSQII*EKSAHIFESHS
Trigger: AGAGTGAGACTCAAAGATGTGAGCTGACTTTTCCAAGATTATTTGGGAGTTGGTGGCAGACCTATGCCCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518827.1
ENST00000523021.1
CDS CAA 90 bp GGATCACCAACTTGCGCCTCCAAGGAGATGTCATTATCAAGCCTCTaGAAGGCATTAATTAGAGCCTCCTTAACATCAATATCAGTCGAC +
Preference number: 6 (lower is better)
Translates to: GSPTCASKEMSLSSL*KALIRASLTSISVD
Trigger: GTCGACTGATATTGATGTTAAGGAGGCTCTAATTAATGCCTTCAAGAGGCTTGATAATGACATCTCCTTGGAGGCGCAAGTTGGTGATCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CAA 90 bp TCTCACTCTCTTCTCTCTCCCCTTGGAGTGAGAGGTGTCCTGAAATaGGTTCTGGATACTTGGAATATTTTCTCTTGCATCTCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: SHSLLSPLGVRGVLK*VLDTWNIFSCISKP
Trigger: AGGCTTTGAGATGCAAGAGAAAATATTCCAAGTATCCAGAACCAATTTCAGGACACCTCTCACTCCAAGGGGAGAGAGAAGAGAGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523021.1
CDS CAA 72 bp CACCAGGTAGTTGAGAAAAGAATTAGGATCACCAACTaGCGCCTCCAAGGAGATGTCATTATCAAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: HQVVEKRIRITN*RLQGDVIIKPL
Trigger: AAGAGGCTTGATAATGACATCTCCTTGGAGGCGCAAGTTGGTGATCCTAATTCTTTTCTCAACTACCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CAA 72 bp TTGTGCAGTACAAACTGTGCAGAATGTACAACAGATTaGGCTGGGGAAAGCCCAGTAGATGGTCTTGCAAAA +
Preference number: 6 (lower is better)
Translates to: LCSTNCAECTTD*AGESPVDGLAK
Trigger: TTTTGCAAGACCATCTACTGGGCTTTCCCCAGCCAAATCTGTTGTACATTCTGCACAGTTTGTACTGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518827.1
CDS CAA 72 bp CTTCTCTCTCCCCTTGGAGTGAGAGGTGTCCTGAAATaGGTTCTGGATACTTGGAATATTTTCTCTTGCATC +
Preference number: 6 (lower is better)
Translates to: LLSPLGVRGVLK*VLDTWNIFSCI
Trigger: GATGCAAGAGAAAATATTCCAAGTATCCAGAACCAATTTCAGGACACCTCTCACTCCAAGGGGAGAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523021.1
CDS GCA 72 bp CATGAACGTGGATATTCAAGTACCTGTTCGAGTCCCTaGTTTCCCTTCAGGGAAATTCTTATCACAGATTCA +
Preference number: 6 (lower is better)
Translates to: HERGYSSTCSSP*FPFREILITDS
Trigger: TGAATCTGTGATAAGAATTTCCCTGAAGGGAAAGCAGGGACTCGAACAGGTACTTGAATATCCACGTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523021.1
CDS CAA 90 bp AACATCAATATCAGTCGACTCACCAGTGTTGAGGTCTATAAGCTCTaGCCAGTAAGTCCTCAAGCTGTTAAAGTACAATTTGGATGCCTC +
Preference number: 6 (lower is better)
Translates to: NINISRLTSVEVYKL*PVSPQAVKVQFGCL
Trigger: GAGGCATCCAAATTGTACTTTAACAGCTTGAGGACTTACTGGCAAGAGCTTATAGACCTCAACACTGGTGAGTCGACTGATATTGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518827.1
ENST00000520728.5
CDS TCA 72 bp TTCAACTGGTCTGGGCCAGATTCTATCACTCTCTTTTaGAGGTCAATGCTCCATTTGAACTTTACATCTCCA +
Preference number: 6 (lower is better)
Translates to: FNWSGPDSITLF*RSMLHLNFTSP
Trigger: TGGAGATGTAAAGTTCAAATGGAGCATTGACCTTCAAAAGAGAGTGATAGAATCTGGCCCAGACCAGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS CAA 72 bp ACTTGCGCCTCCAAGGAGATGTCATTATCAAGCCTCTaGAAGGCATTAATTAGAGCCTCCTTAACATCAATA +
Preference number: 6 (lower is better)
Translates to: TCASKEMSLSSL*KALIRASLTSI
Trigger: TATTGATGTTAAGGAGGCTCTAATTAATGCCTTCAAGAGGCTTGATAATGACATCTCCTTGGAGGCGCAAGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000520728.5
CDS GCA 72 bp TTGTTTATGCATGCAGGCGTCAGTGATCACTTAGGTTaGTTCCATATTTTGACTATTGTGAATAATGCTGCC +
Preference number: 6 (lower is better)
Translates to: LFMHAGVSDHLG*FHILTIVNNAA
Trigger: GGCAGCATTATTCACAATAGTCAAAATATGGAAGCAACCTAAGTGATCACTGACGCCTGCATGCATAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523021.1
CDS CCA 72 bp ACTGTATTCATTAGCTTTAAGGATGCTATTGACTTGTaGAGGTGTGAGGTAAAATTTCTGTGGTGTGGAAGC +
Preference number: 6 (lower is better)
Translates to: TVFISFKDAIDL*RCEVKFLWCGS
Trigger: GCTTCCACACCACAGAAATTTTACCTCACACCTCCACAAGTCAATAGCATCCTTAAAGCTAATGAATACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518573.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS CAA 90 bp TTTATGCATGCAGGCGTCAGTGATCACTTAGGTTGCTTCCATATTTaGACTATTGTGAATAATGCTGCCATGAACGTGGATATTCAAGTA +
Preference number: 6 (lower is better)
Translates to: FMHAGVSDHLGCFHI*TIVNNAAMNVDIQV
Trigger: TACTTGAATATCCACGTTCATGGCAGCATTATTCACAATAGTCAAAATATGGAAGCAACCTAAGTGATCACTGACGCCTGCATGCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523021.1
CDS TCA 72 bp TACATTCCACAGTTTGTTTATGCATGCAGGCGTCAGTaGTCACTTAGGTTGCTTCCATATTTTGACTATTGT +
Preference number: 6 (lower is better)
Translates to: YIPQFVYACRRQ*SLRLLPYFDYC
Trigger: ACAATAGTCAAAATATGGAAGCAACCTAAGTGATCACTGACGCCTGCATGCATAAACAAACTGTGGAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523021.1
CDS CAA 72 bp GAAACTGTATTCATTAGCTTTAAGGATGCTATTGACTaGTGGAGGTGTGAGGTAAAATTTCTGTGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: ETVFISFKDAID*WRCEVKFLWCG
Trigger: TCCACACCACAGAAATTTTACCTCACACCTCCACAAGTCAATAGCATCCTTAAAGCTAATGAATACAGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518573.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS CAA 90 bp AATCCAAGGATAGAACTGACATTTTTGCCGTCAAATTCTGGCACTTaGAAACTGTATTCATTAGCTTTAAGGATGCTATTGACTTGTGGA +
Preference number: 6 (lower is better)
Translates to: NPRIELTFLPSNSGT*KLYSLALRMLLTCG
Trigger: TCCACAAGTCAATAGCATCCTTAAAGCTAATGAATACAGTTTCAAAGTGCCAGAATTTGACGGCAAAAATGTCAGTTCTATCCTTGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518573.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1
CDS GCA 72 bp GAGAGAGTGAATTTTATTGACTCTATCTTTCAGTTATaGAGAGGCTTAGTACATGGACTGAGATTATATCCT +
Preference number: 6 (lower is better)
Translates to: ERVNFIDSIFQL*RGLVHGLRLYP
Trigger: AGGATATAATCTCAGTCCATGTACTAAGCCTCTGCATAACTGAAAGATAGAGTCAATAAAATTCACTCTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518827.1
CDS CAA 72 bp ATAGAACTGACATTTTTGCCGTCAAATTCTGGCACTTaGAAACTGTATTCATTAGCTTTAAGGATGCTATTG +
Preference number: 6 (lower is better)
Translates to: IELTFLPSNSGT*KLYSLALRMLL
Trigger: CAATAGCATCCTTAAAGCTAATGAATACAGTTTCAAAGTGCCAGAATTTGACGGCAAAAATGTCAGTTCTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000297598.5
ENST00000396200.3
ENST00000517764.1
ENST00000518573.1
ENST00000518827.1
ENST00000520728.5
ENST00000521144.1