RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDLIM7 (Homo sapiens)

Ensembl gene IDs: ENSG00000196923

Ensembl transcript IDs: ENST00000355572.6, ENST00000355841.7, ENST00000359895.6, ENST00000393546.8, ENST00000393551.5, ENST00000463411.1, ENST00000486828.6, ENST00000493815.5, ENST00000503346.1, ENST00000503827.5, ENST00000504318.5, ENST00000504380.1, ENST00000505074.5, ENST00000505746.1, ENST00000506161.5, ENST00000506537.1

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCTGCCTGCACAATGGAGGTGCGGCTCTGCAGCGGCGTGGGCGTaGCCGGCTGGCTGTGCCGGGTCAGCACTGTGCTCGTTTTGTCCG +
Preference number: 1 (lower is better)
Translates to: QLPAQWRCGSAAAWA*PAGCAGSALCSFCP
Trigger: CGGACAAAACGAGCACAGTGCTGACCCGGCACAGCCAGCCGGCCACGCCCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR GCA 90 bp GCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGTAAAGCAGTaGACGTGCCAGGTCATCTTCAGGGCGTGCATGATCTCGCCTGTA +
Preference number: 1 (lower is better)
Translates to: ALFRMGVLQAAQVKQ*TCQVIFRACMISPV
Trigger: TACAGGCGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTTTACCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR CCA 90 bp CTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTaGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGCCACCCTCTTC +
Preference number: 1 (lower is better)
Translates to: LALGTAGCIAHVIAW*AEDGALLLKEATLF
Trigger: GAAGAGGGTGGCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
3UTR CCA 90 bp CTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATaGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGCCACCCTC +
Preference number: 1 (lower is better)
Translates to: LLALGTAGCIAHVIA*WAEDGALLLKEATL
Trigger: GAGGGTGGCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CCA 90 bp CCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCGTGGGCGTGGCCGGCTaGCTGTGCCGGGTCAGCACT +
Preference number: 2 (lower is better)
Translates to: PRNAGPRLQAPQARGHRGVGVAG*LCRVST
Trigger: AGTGCTGACCCGGCACAGCCAGCCGGCCACGCCCAC...GCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR GCA 90 bp CCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGTGGCCGGCTGGCTGTaGCGGGTCAGCACTGTGCTC +
Preference number: 2 (lower is better)
Translates to: PYPEMQGHDSRPLRLGATVAGWL*RVSTVL
Trigger: GAGCACAGTGCTGACCCGGCACAGCCAGCCGGCCAC...GGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR GCA 90 bp CCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCGAGTCTTGCCGTTGTTaGTGCCCCCTCCTGGCACCC +
Preference number: 2 (lower is better)
Translates to: PRNAGPRLQAPQARGHRGESCRC*CPLLAP
Trigger: GGGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTC...GCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR GCA 90 bp CCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCCTGCACAATGGAGGTaGGGCTCTGCAGCGGCGTGG +
Preference number: 2 (lower is better)
Translates to: PALPRNAGPRLQAPQARGPAQWR*GSAAAW
Trigger: CCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGG...GCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR CAA 90 bp CAGGGAGCCCCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATaGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCT +
Preference number: 2 (lower is better)
Translates to: QGAPGSGQEPGLRQP*PALPRNAGPRLQAP
Trigger: AGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGGGGCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR TCA 90 bp CGCGTGGCCCAGCGCCACCAGGTAGCGGCCCCGGATGACCTTGTGGCACTGGTGCCTGGGCACCTGGCTTaGTTTCTTCAGGTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: RVAQRHQVAAPDDLVALVPGHLA*FLQVLL
Trigger: GAGGAGCACCTGAAGAAATCAAGCCAGGTGCCCAGG...CACCAGTGCCACAAGGTCATCCGGGGCCGCTACCTGGTGGCGCTGGGCCACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493815.5
3UTR-3UTR CCA 90 bp GTGGTGGTGGAGGGAGTGGGGTGGGAGGATAAGGTGGGTGGGGCAGGGCCCAGGGCGCACGTCATAGCATaGTGGGCAGAAGATGGCGCC +
Preference number: 2 (lower is better)
Translates to: VVVEGVGWEDKVGGAGPRAHVIA*WAEDGA
Trigger: GGCGCCATCTTCTGCCCACCATGCTATGACGTGCGC...CCTGGGCCCTGCCCCACCCACCTTATCCTCCCACCCCACTCCCTCCACCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR GCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGGAGGCACTAAGGGGGTaGCCTGGGCAGGAGGAACAG +
Preference number: 2 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQEALRG*PGQEEQ
Trigger: CTGTTCCTCCTGCCCAGGGCACCCCCTTAGTGCCTC...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355572.6
3UTR-3UTR GCA 90 bp CCTCCTCCATGTAGAAGGCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGCACCCCTCCGGCAGCTaGCTGCACAATGGAGGTGCG +
Preference number: 2 (lower is better)
Translates to: PPPCRRPCSGWASCRQHRHPSGS*LHNGGA
Trigger: CGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTG...CCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CCA 90 bp CTTCCCACACTGGCTACACACAAACTCCTCCGGGTGGTACGCGTGGCCCAGCGCCAGCTGCCTGCACAATaGAGGTGCGGCTCTGCAGCG +
Preference number: 2 (lower is better)
Translates to: LPTLATHKLLRVVRVAQRQLPAQ*RCGSAA
Trigger: CGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTG...GCGCTGGGCCACGCGTACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR GCA 90 bp TTTTGTCCGGGGCATAGCGCTCGGCAAACGCAGGGTCCACAGCCCAGGGCGGGCCCTGGCTGCAAGATCTaGCATTCAAGGCCCTGCATG +
Preference number: 2 (lower is better)
Translates to: FCPGHSARQTQGPQPRAGPGCKI*HSRPCM
Trigger: CATGCAGGGCCTTGAATGGCAGATCTTGCAGCCAGG...GCCCGCCCTGGGCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486828.6
3UTR-3UTR CCA 90 bp CCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCTCTTCTTCTTGCACTTaGCACAGCTGGGTGCATAGC +
Preference number: 2 (lower is better)
Translates to: PRNAGPRLQAPQARGHRGSSSCT*HSWVHS
Trigger: GCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGA...GCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR GCA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGCCTCCGGCAGCTGCCTaGACAATGGAGGTGCGGCTC +
Preference number: 2 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQPPAAA*TMEVRL
Trigger: GAGCCGCACCTCCATTGTGCAGGCAGCTGCCGGAGG...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CCA 90 bp CAGTGCACGTGCCAGGTCATCTTCAGGGCGTGCATGATCTCGCCTGTAATCTTCGTTGCTGCCCCCTCCTaGCACCCCTCCGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: QCTCQVIFRACMISPVIFVAAPS*HPSGSC
Trigger: GCAGCTGCCGGAGGGGTGCCAGGAGGGGGCAGCAAC...GAAGATTACAGGCGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR TCA 90 bp AGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGCGGTAGCGGCCCCGGATaGCCTTGTGGCACTGGTGAC +
Preference number: 2 (lower is better)
Translates to: SARHSMVGRRWRPSPQRSGSGPG*PCGTGD
Trigger: GTCACCAGTGCCACAAGGTCATCCGGGGCCGCTACC...GCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR GCA 90 bp AGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGCCACCCCTCCGGCAGCTaGCTGCACAATGGAGGTGCG +
Preference number: 2 (lower is better)
Translates to: SARHSMVGRRWRPSPQRSHPSGS*LHNGGA
Trigger: CGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTG...GCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR GCA 90 bp GGCAGAAGGGGCTCACACATGAGAGAAGGCATGGCTCTTGCAGAGAGGCCTGTCGAGTCTTGCCGTTGTTaGTGCCCCCTCCTGGCACCC +
Preference number: 2 (lower is better)
Translates to: GRRGSHMREGMALAERPVESCRC*CPLLAP
Trigger: GGGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTC...GACAGGCCTCTCTGCAAGAGCCATGCCTTCTCTCATGTGTGAGCCCCTTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CCA 90 bp GGCAGCTGTGGGCAGAAGGGGCTCACACATGAGAGAAGGCATGGCTCTTGCAGACAGCTGCCTGCACAATaGAGGTGCGGCTCTGCAGCG +
Preference number: 2 (lower is better)
Translates to: GSCGQKGLTHERRHGSCRQLPAQ*RCGSAA
Trigger: CGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTG...TCTGCAAGAGCCATGCCTTCTCTCATGTGTGAGCCCCTTCTGCCCACAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CCA 90 bp GGCAGCTGTGGGCAGAAGGGGCTCACACATGAGAGAAGGCATGGCTCTTGCAGAAGGCCCTGTTCCGGATaGGCGTCTTGCAGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: GSCGQKGLTHERRHGSCRRPCSG*ASCRQH
Trigger: GTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCT...TCTGCAAGAGCCATGCCTTCTCTCATGTGTGAGCCCCTTCTGCCCACAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR TCA 90 bp GCGGTCCCCAGCGTCGATCTTGAAGTCACAGCCATGGCATTTCGTGCCAAACATTGGCCCCACGGGAGATaGCTGGGGGCGTGGAAACTG +
Preference number: 2 (lower is better)
Translates to: AVPSVDLEVTAMAFRAKHWPHGR*LGAWKL
Trigger: CAGTTTCCACGCCCCCAGTCATCTCCCGTGGGGCCA...ATGTTTGGCACGAAATGCCATGGCTGTGACTTCAAGATCGACGCTGGGGACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486828.6
3UTR-3UTR GCA 90 bp CACTGTGCTCGTTTTGTCCGGGGCATAGCGCTCGGCAAACGCAGGGTCCACAGCCTTGGCACAGCTGGGTaGATAGCGCACGTCATAGCA +
Preference number: 2 (lower is better)
Translates to: HCARFVRGIALGKRRVHSLGTAG*IAHVIA
Trigger: TGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAG...GCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACGAGCACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR GCA 90 bp CCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCCATGGCATTTCGTaGCAAACATCTTCTCATAGT +
Preference number: 2 (lower is better)
Translates to: PRNAGPRLQAPQARGHRGSHGIS*QTSSHS
Trigger: ACTATGAGAAGATGTTTGGCACGAAATGCCATGGCT...GCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CCA 90 bp CAGCACTGTGCTCGTTTTGTCCGGGGCATAGCGCTCGGCAAACGCAGGGTCCACTCTGTCCTGGGCACCTaGCTGCAAGATCTGCCATTC +
Preference number: 2 (lower is better)
Translates to: QHCARFVRGIALGKRRVHSVLGT*LQDLPF
Trigger: GAATGGCAGATCTTGCAGCCAGGTGCCCAGGACAGA...GTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACGAGCACAGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486828.6
3UTR-3UTR CCA 90 bp ACCTTCCCACACTGGCTACACACAAACTCCTCCGGGTGGTACGCGTGGCCCAGCCTGGGGCTTCTGTCCTaGGCACCTGGCTTGATTTCT +
Preference number: 2 (lower is better)
Translates to: TFPHWLHTNSSGWYAWPSLGLLS*APGLIS
Trigger: AGAAATCAAGCCAGGTGCCCAGGACAGAAGCCCCAG...GCTGGGCCACGCGTACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493815.5
3UTR-3UTR CCA 90 bp TGGGGCTTCTGTCCTGGGCACCTGGCTGCAAGATCTGCCATTCAAGGCCCTGCATGCACTTGGCACAGCTaGGTGCATAGCGCACGTCAT +
Preference number: 2 (lower is better)
Translates to: WGFCPGHLAARSAIQGPACTWHS*VHSARH
Trigger: ATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCA...TGCAGGGCCTTGAATGGCAGATCTTGCAGCCAGGTGCCCAGGACAGAAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486828.6
3UTR-3UTR CCA 90 bp CAGCCAGCCCTACTCACGCCTGTAATCTTCTTCTTGCACTTGGCACAGCTGGGTGCGCACGTCATAGCATaGTGGGCAGAAGATGGCGCC +
Preference number: 2 (lower is better)
Translates to: QPALLTPVIFFLHLAQLGAHVIA*WAEDGA
Trigger: GGCGCCATCTTCTGCCCACCATGCTATGACGTGCGC...ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGGCGTGAGTAGGGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393551.5
3UTR-3UTR TCA 90 bp GCGTGCATGATCTCGCCTGTAATCTTCTTCTTGCACTTGGCACAGCTGGGTGCAACCTTGTGGCACTGGTaGCACACGGGAGTCTTGCCG +
Preference number: 2 (lower is better)
Translates to: ACMISPVIFFLHLAQLGATLWHW*HTGVLP
Trigger: CGGCAAGACTCCCGTGTGTCACCAGTGCCACAAGGT...TGCACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGGCGAGATCATGCACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR GCA 90 bp ACCCTCTTCCAGGACCTTCCCACACTGGCTACACACAAACTCCTCCGGGTGGTATCCTGGGCACCTGGCTaGAAGATCTGCCATTCAAGG +
Preference number: 2 (lower is better)
Translates to: TLFQDLPTLATHKLLRVVSWAPG*KICHSR
Trigger: CCTTGAATGGCAGATCTTGCAGCCAGGTGCCCAGGA...TACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCTGGAAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486828.6
3UTR-3UTR CCA 90 bp AGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGCCACGTCATAGCATGGTaGGCAGAAGATGGCGCCCTT +
Preference number: 2 (lower is better)
Translates to: SARHSMVGRRWRPSPQRSHVIAW*AEDGAL
Trigger: AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTG...GCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CCA 90 bp GTGAGGCCAGTACAGCAGCCCATTTATTACGCTGGTAAGGACCCGGAGGGCTCAATGGTGGGCAGAAGATaGCGCCCTTCTCCTCAAAGA +
Preference number: 2 (lower is better)
Translates to: VRPVQQPIYYAGKDPEGSMVGRR*RPSPQR
Trigger: TCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCAT...TGAGCCCTCCGGGTCCTTACCAGCGTAATAAATGGGCTGCTGTACTGGCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393551.5
3UTR-3UTR CCA 90 bp GCGGTCCCCAGCGTCGATCTTGAAGTCACAGCCATGGCATTTCGTGCCAAACATATGGTGGGCAGAAGATaGCGCCCTTCTCCTCAAAGA +
Preference number: 2 (lower is better)
Translates to: AVPSVDLEVTAMAFRAKHMVGRR*RPSPQR
Trigger: TCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCAT...ATGTTTGGCACGAAATGCCATGGCTGTGACTTCAAGATCGACGCTGGGGACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR GCA 90 bp GGCATTTCGTGCCAAACATCTTCTCATAGTCTCGCTCGCAATAGGGCACGCCCTGTCATCTTCAGGGCGTaGATGATCTCGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: GISCQTSSHSLARNRARPVIFRA*MISPVI
Trigger: GATTACAGGCGAGATCATGCACGCCCTGAAGATGAC...AGGGCGTGCCCTATTGCGAGCGAGACTATGAGAAGATGTTTGGCACGAAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR GCA 72 bp CTGGCACCCCTCCGGCAGCTGCCTGCACAATGGAGGTaGGGCTCTGCAGCGGCGTGGGCGTGGCCGGCTGGC +
Preference number: 3 (lower is better)
Translates to: LAPLRQLPAQWR*GSAAAWAWPAG
Trigger: GCCAGCCGGCCACGCCCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTGCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR CCA 72 bp CCCCTCCTGGCACCCCTCCGGCAGCTGCCTGCACAATaGAGGTGCGGCTCTGCAGCGGCGTGGGCGTGGCCG +
Preference number: 3 (lower is better)
Translates to: PLLAPLRQLPAQ*RCGSAAAWAWP
Trigger: CGGCCACGCCCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTGCCAGGAGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR GCA 72 bp CGGCTCTGCAGCGGCGTGGGCGTGGCCGGCTGGCTGTaGCGGGTCAGCACTGTGCTCGTTTTGTCCGGGGCA +
Preference number: 3 (lower is better)
Translates to: RLCSGVGVAGWL*RVSTVLVLSGA
Trigger: TGCCCCGGACAAAACGAGCACAGTGCTGACCCGGCACAGCCAGCCGGCCACGCCCACGCCGCTGCAGAGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR GCA 72 bp TTGCTGCCCCCTCCTGGCACCCCTCCGGCAGCTGCCTaGACAATGGAGGTGCGGCTCTGCAGCGGCGTGGGC +
Preference number: 3 (lower is better)
Translates to: LLPPPGTPPAAA*TMEVRLCSGVG
Trigger: GCCCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTGCCAGGAGGGGGCAGCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR GCA 72 bp GTTGTTGCTGCCCCCTCCTGGCACCCCTCCGGCAGCTaGCTGCACAATGGAGGTGCGGCTCTGCAGCGGCGT +
Preference number: 3 (lower is better)
Translates to: VVAAPSWHPSGS*LHNGGAALQRR
Trigger: ACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTGCCAGGAGGGGGCAGCAACAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR GCA 72 bp TGGGCGTGGCCGGCTGGCTGTGCCGGGTCAGCACTGTaGTCGTTTTGTCCGGGGCATAGCGCTCGGCAAACG +
Preference number: 3 (lower is better)
Translates to: WAWPAGCAGSAL*SFCPGHSARQT
Trigger: CGTTTGCCGAGCGCTATGCCCCGGACAAAACGAGCACAGTGCTGACCCGGCACAGCCAGCCGGCCACGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR GCA 72 bp TGTGGCACTGGTGACACACGGGAGTCTTGCCGTTGTTaGTGCCCCCTCCTGGCACCCCTCCGGCAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: CGTGDTRESCRC*CPLLAPLRQLP
Trigger: AGGCAGCTGCCGGAGGGGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTCCCGTGTGTCACCAGTGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR CCA 72 bp GACCCGGAGGGCTCACTCGGGGAGAGACCTGGACTGTaGGTTTCCCAGCAGCCCTCGTTCCCACTGACAGGC +
Preference number: 3 (lower is better)
Translates to: DPEGSLGERPGL*VSQQPSFPLTG
Trigger: GCCTGTCAGTGGGAACGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTCCCCGAGTGAGCCCTCCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
3UTR-3UTR CAA 90 bp GTGGTGGTGGAGGGAGTGGGGTGGGAGGATAAGGTGGGTGGGGCAGGGCCCAGGGTGGAAACTGCCGAGTaGGATTCCAGGTCCCACTGG +
Preference number: 3 (lower is better)
Translates to: VVVEGVGWEDKVGGAGPRVETAE*DSRSHW
Trigger: CCAGTGGGACCTGGAATCCAACTCGGCAGTTTCCAC...CCTGGGCCCTGCCCCACCCACCTTATCCTCCCACCCCACTCCCTCCACCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486828.6
3UTR CCA 72 bp CCCAACCTGGGTCCTGCTGGCCCCACGGGAGATGACTaGGGGCGTGGAAACTGCCGAGTTGGATTCCAGGTC +
Preference number: 3 (lower is better)
Translates to: PNLGPAGPTGDD*GRGNCRVGFQV
Trigger: GACCTGGAATCCAACTCGGCAGTTTCCACGCCCCCAGTCATCTCCCGTGGGGCCAGCAGGACCCAGGTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486828.6
3UTR CCA 72 bp ACACACGGGAGTCTTGCCGTTGTTGCTGCCCCCTCCTaGCACCCCTCCGGCAGCTGCCTGCACAATGGAGGT +
Preference number: 3 (lower is better)
Translates to: THGSLAVVAAPS*HPSGSCLHNGG
Trigger: ACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTCCCGTGTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CAA 90 bp TTTTGTCCGGGGCATAGCGCTCGGCAAACGCAGGGTCCACAGCCCAGGGCGGGCGGGTTAAGGCAACCATaGCCAGCCCTACCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: FCPGHSARQTQGPQPRAGGLRQP*PALPRN
Trigger: ATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC...GCCCGCCCTGGGCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CAA 90 bp AGCCCATTTATTACGCTGGTAAGGACCCGGAGGGCTCACTCGGGGAGAGACCTGTTCCCACTGACAGGCTaGGGACCACCTCCCCGCCAG +
Preference number: 3 (lower is better)
Translates to: SPFITLVRTRRAHSGRDLFPLTG*GPPPRQ
Trigger: CTGGCGGGGAGGTGGTCCCAAGCCTGTCAGTGGGAA...CAGGTCTCTCCCCGAGTGAGCCCTCCGGGTCCTTACCAGCGTAATAAATGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393551.5
3UTR-3UTR CAA 90 bp GGCAGCTGTGGGCAGAAGGGGCTCACACATGAGAGAAGGCATGGCTCTTGCAGAACGGGAGTCTTGCCGTaGTTGCTGCCCCCTCCTGGC +
Preference number: 3 (lower is better)
Translates to: GSCGQKGLTHERRHGSCRTGVLP*LLPPPG
Trigger: GCCAGGAGGGGGCAGCAACAACGGCAAGACTCCCGT...TCTGCAAGAGCCATGCCTTCTCTCATGTGTGAGCCCCTTCTGCCCACAGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CAA 90 bp CCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAGGGTTAAGGCAACCATaGCCAGCCCTACCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: PGSGQEPGLRQPLPALPRGLRQP*PALPRN
Trigger: ATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC...TCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CAA 90 bp CTTCCCACACTGGCTACACACAAACTCCTCCGGGTGGTACGCGTGGCCCAGCGCGGGTTAAGGCAACCATaGCCAGCCCTACCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: LPTLATHKLLRVVRVAQRGLRQP*PALPRN
Trigger: ATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC...GCGCTGGGCCACGCGTACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR GCA 72 bp GGCGTCTTGCAGGCAGCACAGGTAAAGCAGTGCACGTaGCAGGTCATCTTCAGGGCGTGCATGATCTCGCCT +
Preference number: 3 (lower is better)
Translates to: GVLQAAQVKQCT*QVIFRACMISP
Trigger: AGGCGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTTTACCTGTGCTGCCTGCAAGACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR CCA 72 bp GGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTaGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGCC +
Preference number: 3 (lower is better)
Translates to: GTAGCIAHVIAW*AEDGALLLKEA
Trigger: GGCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CAA 90 bp GAGGGCTCACTCGGGGAGAGACCTGGACTGTGGGTTTCCCAGCAGCCCTCGTTCCCTGTAATCTTCTTCTaGCACTTGGCACAGCTGGGT +
Preference number: 3 (lower is better)
Translates to: EGSLGERPGLWVSQQPSFPVIFF*HLAQLG
Trigger: ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGG...GAACGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTCCCCGAGTGAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
3UTR TCA 72 bp CCAGGGCCTCCAGGAAGCGGTCCCCAGCGTCGATCTTaGAGTCACAGCCATGGCATTTCGTGCCAAACATCT +
Preference number: 3 (lower is better)
Translates to: PGPPGSGPQRRS*SHSHGISCQTS
Trigger: AGATGTTTGGCACGAAATGCCATGGCTGTGACTTCAAGATCGACGCTGGGGACCGCTTCCTGGAGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
3UTR-3UTR CAA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGGGTTAAGGCAACCATaGCCAGCCCTACCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQGLRQP*PALPRN
Trigger: ATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
3UTR CCA 72 bp CTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATaGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGAA +
Preference number: 3 (lower is better)
Translates to: LGTAGCIAHVIA*WAEDGALLLKE
Trigger: TTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGGGCTCTGCAGCGGCGTaGGCGTGGCCGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPRLQAPQARGHRGSCGQGSAAA*AWPAGC
Trigger: ACAGCCAGCCGGCCACGCCCACGCCGCTGCAGAGCC...CTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGATGCCGGCTCCTGCTTaGCCCGGCCAGGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPRLQAPQARGHRGSCGQMPAPA*PGQGAA
Trigger: AGCAGCGCCCTGGCCGGGCCAAGCAGGAGCCGGCAT...CTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGCACCCCTCCGGCAGCTaGCTGCACAATGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: GPRLQAPQARGHRGSCGQHPSGS*LHNGGA
Trigger: CGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTG...CTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GTGGTGGTGGAGGGAGTGGGGTGGGAGGATAAGGTGGGTGGGGCAGGGCCCAGGCGGAAGGAACGCGACTaGCCTGTCCCCGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: VVVEGVGWEDKVGGAGPRRKERD*PVPGRG
Trigger: GCCGCGGCCGGGGACAGGCCAGTCGCGTTCCTTCCG...CCTGGGCCCTGCCCCACCCACCTTATCCTCCCACCCCACTCCCTCCACCACCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGTGGGCGTGGCCGGCTaGCTGTGCCGGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRVGVAG*LCRVST
Trigger: AGTGCTGACCCGGCACAGCCAGCCGGCCACGCCCAC...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCGTTGCTGCCCCCTCCTaGCACCCCTCCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PRNAGPRLQAPQARGHRGVAAPS*HPSGSC
Trigger: GCAGCTGCCGGAGGGGTGCCAGGAGGGGGCAGCAAC...GCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CGCGTGGCCCAGCGCCACCAGGTAGCGGCCCCGGATGACCTTGTGGCACTGGTGGTTGCTGCCCCCTCCTaGCACCCCTCCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RVAQRHQVAAPDDLVALVVAAPS*HPSGSC
Trigger: GCAGCTGCCGGAGGGGTGCCAGGAGGGGGCAGCAAC...CACCAGTGCCACAAGGTCATCCGGGGCCGCTACCTGGTGGCGCTGGGCCACGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGGCCGGAAGCCCCAAGGTaGTGGCCCCTCCAGCACTAC +
Preference number: 4 (lower is better)
Translates to: RLQAPQARGHRGSCGQKGPEAPR*WPLQHY
Trigger: GTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTCCGG...CCCCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp TACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCCAGGGCGCTGCTCTaGGTCGGGCTCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: YPEMQGHDSRPLRLGATAARALL*VGLQGA
Trigger: GGCTCCCTGGAGCCCGACGCAGAGCAGCGCCCTGGC...CGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355841.7
ENST00000486828.6
CDS-3UTR CCA 90 bp GTGGTGGTGGAGGGAGTGGGGTGGGAGGATAAGGTGGGTGGGGCAGGGCCCAGGATGCCGGCTCCTGCTTaGCCCGGCCAGGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VVVEGVGWEDKVGGAGPRMPAPA*PGQGAA
Trigger: AGCAGCGCCCTGGCCGGGCCAAGCAGGAGCCGGCAT...CCTGGGCCCTGCCCCACCCACCTTATCCTCCCACCCCACTCCCTCCACCACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGGTAGCGGCCCCGGATaGCCTTGTGGCACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRGSGPG*PCGTGD
Trigger: GTCACCAGTGCCACAAGGTCATCCGGGGCCGCTACC...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCACGGCCACTCCGGCCTaGGCCGCTTTGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PYPEMQGHDSRPLRLGATTATPA*AALPPG
Trigger: TCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGT...GGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCGGAGGGCTCACTCGGGGAGAGACCTGGACTGTGGGTTTCCCAGCAGCCCTCGACGGCCACTCCGGCCTaGGCCGCTTTGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PEGSLGERPGLWVSQQPSTATPA*AALPPG
Trigger: TCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGT...CGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTCCCCGAGTGAGCCCTCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp CCAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGGGGCACGGCCACTCCGGCCTaGGCCGCTTTGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PAVGAAVCQGSAPILLRGTATPA*AALPPG
Trigger: TCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGT...GCCCCGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR GCA 90 bp CGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGGGAGTCTTGCCGTTGTTaGTGCCCCCTCCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: RLQAPQARGHRGSCGQKGESCRC*CPLLAP
Trigger: GGGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTC...CCCCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGGACACACGGGAGTCTTaGCGTTGTTGCTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GPRLQAPQARGHRGSCGQDTRES*RCCCPL
Trigger: GAGGGGGCAGCAACAACGGCAAGACTCCCGTGTGTC...CTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTCTGCACCCATTCTGCTaGGGGGCGCTGTCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: NAGPRLQAPQARGHRGSCLHPFC*GALSAG
Trigger: GCCCGCTGACAGCGCCCCGCAGCAGAATGGGTGCAG...ACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493815.5
CDS-3UTR CCA 90 bp CGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGGCAGCTGCCTGCACAATaGAGGTGCGGCTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: RLQAPQARGHRGSCGQKGQLPAQ*RCGSAA
Trigger: CGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTG...CCCCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGACAAACTCCTCCGGGTaGTACGCGTGGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRTNSSG*YAWPSA
Trigger: GGCGCTGGGCCACGCGTACCACCCGGAGGAGTTTGT...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGTTCTGCGGTTTGCTCTaGACCGGCTGGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRFCGLL*TGWALL
Trigger: CAGCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAA...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GTGGTGGTGGAGGGAGTGGGGTGGGAGGATAAGGTGGGTGGGGCAGGGCCCAGGCCGGAAGCCCCAAGGTaGTGGCCCCTCCAGCACTAC +
Preference number: 4 (lower is better)
Translates to: VVVEGVGWEDKVGGAGPRPEAPR*WPLQHY
Trigger: GTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTCCGG...CCTGGGCCCTGCCCCACCCACCTTATCCTCCCACCCCACTCCCTCCACCACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AGCCCCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCACGGCCACTCCGGCCTaGGCCGCTTTGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPRLGPGARVKATIASPTTATPA*AALPPG
Trigger: TCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGT...GGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GAGGGCTCACTCGGGGAGAGACCTGGACTGTGGGTTTCCCAGCAGCCCTCGTTCGCCAGGGCGCTGCTCTaGGTCGGGCTCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EGSLGERPGLWVSQQPSFARALL*VGLQGA
Trigger: GGCTCCCTGGAGCCCGACGCAGAGCAGCGCCCTGGC...GAACGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTCCCCGAGTGAGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp CGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGGGCCGGGTCAGCACTGTaGTCGTTTTGTCCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RLQAPQARGHRGSCGQKGAGSAL*SFCPGH
Trigger: ATGCCCCGGACAAAACGAGCACAGTGCTGACCCGGC...CCCCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTCCTCCGGCAGCTGCCTaGACAATGGAGGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: NAGPRLQAPQARGHRGSCPPAAA*TMEVRL
Trigger: GAGCCGCACCTCCATTGTGCAGGCAGCTGCCGGAGG...ACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGGGGCCTGCACCCATTCTGCTaGGGGGCGCTGTCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PAVGAAVCQGSAPILLRGLHPFC*GALSAG
Trigger: GCCCGCTGACAGCGCCCCGCAGCAGAATGGGTGCAG...GCCCCGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR CCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCACGGAAGGAACGCGACTaGCCTGTCCCCGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPRKERD*PVPGRG
Trigger: GCCGCGGCCGGGGACAGGCCAGTCGCGTTCCTTCCG...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CCA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGTCCAGGGAGCCTCGTTaGGATCGGCCGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRSREPR*DRPPVF
Trigger: GAACACTGGCGGCCGATCCCAACGAGGCTCCCTGGA...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355841.7
ENST00000486828.6
CDS-3UTR CCA 90 bp CGGGGAGAGACCTGGACTGTGGGTTTCCCAGCAGCCCTCGTTCCCACTGACAGGGGCTCTGCAGCGGCGTaGGCGTGGCCGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGETWTVGFPAALVPTDRGSAAA*AWPAGC
Trigger: ACAGCCAGCCGGCCACGCCCACGCCGCTGCAGAGCC...CCTGTCAGTGGGAACGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CCA 90 bp CGCGTGGCCCAGCGCCACCAGGTAGCGGCCCCGGATGACCTTGTGGCACTGGTGAGGCCCTGTTCCGGATaGGCGTCTTGCAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RVAQRHQVAAPDDLVALVRPCSG*ASCRQH
Trigger: GTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCT...CACCAGTGCCACAAGGTCATCCGGGGCCGCTACCTGGTGGCGCTGGGCCACGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp AATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTCCACCGCGGCAGCTGTaGGCAGAAGGGGCTCACACA +
Preference number: 4 (lower is better)
Translates to: NAGPRLQAPQARGHRGSCPPRQL*AEGAHT
Trigger: TGTGTGAGCCCCTTCTGCCCACAGCTGCCGCGGTGG...ACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGGGGCGCTGGCGGGCAGGGTAAGGTaGGGGCCTGGGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RSERLFVRGLHPFCCGALAGRVR*GPGWKW
Trigger: CCACTTCCACCCAGGCCCCCACCTTACCCTGCCCGC...CAGCGCCCCGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR TCA 90 bp CCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCCGGGCCGTCTTGTTaGGGGAGACGCTGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PYPEMQGHDSRPLRLGATAGPSC*GRRWVQ
Trigger: TTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGC...GGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAACGGCCACTCCGGCCTaGGCCGCTTTGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPTATPA*AALPPG
Trigger: TCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGT...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR GCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGGCAGAGCGCTGGTGGTaGCAGTCCCGGAGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQAERWW*QSRRRV
Trigger: CACCCGCCTCCGGGACTGGCACCACCAGCGCTCTGC...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR GCA 90 bp GTTCCCACTGACAGGCTTGGGACCACCTCCCCGCCAGCCAGCCCTACTCACGCCCCTCCGGCAGCTGCCTaGACAATGGAGGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: VPTDRLGTTSPPASPTHAPPAAA*TMEVRL
Trigger: GAGCCGCACCTCCATTGTGCAGGCAGCTGCCGGAGG...GGCGTGAGTAGGGCTGGCTGGCGGGGAGGTGGTCCCAAGCCTGTCAGTGGGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp CCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCCCTCCGGCAGCTaGCTGCACAATGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: PALPRNAGPRLQAPQARGHPSGS*LHNGGA
Trigger: CGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTG...GCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCACGAAGCAGGTGTCATaGCAGCTGAAGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PRNAGPRLQAPQARGHRGTKQVS*QLKPRA
Trigger: GGCCCTGGGCTTCAGCTGGCATGACACCTGCTTCGT...GCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGGGGCGCTGGTCTGCACCCATTCTaGTGCGGGGCGCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: AVGAAVCQGSAPILLRGAGLHPF*CGALSA
Trigger: CGCTGACAGCGCCCCGCAGCAGAATGGGTGCAGACC...AGCGCCCCGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR GCA 90 bp CAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGGGGCGGCGCCTTCTGCGGTTTaGTCTGAACCGGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: QRSERLFVRGLHPFCCGAAPSAV*SEPAGP
Trigger: GGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGCGC...CGCCCCGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR CCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAATGCCGGCTCCTGCTTaGCCCGGCCAGGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPMPAPA*PGQGAA
Trigger: AGCAGCGCCCTGGCCGGGCCAAGCAGGAGCCGGCAT...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCATGGGCAGAGCGCTGGTaGTGCCAGTCCCGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPWAERW*CQSRRR
Trigger: CCGCCTCCGGGACTGGCACCACCAGCGCTCTGCCCA...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGGAGAGGGCAGCCGGCTaGAGAGGGCCGGGCTACGAC +
Preference number: 4 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQERAAG*RGPGYD
Trigger: GTCGTAGCCCGGCCCTCTCCAGCCGGCTGCCCTCTC...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGGCTCTGCAGCGGCGTaGGCGTGGCCGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQGSAAA*AWPAGC
Trigger: ACAGCCAGCCGGCCACGCCCACGCCGCTGCAGAGCC...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GAGGGCTCACTCGGGGAGAGACCTGGACTGTGGGTTTCCCAGCAGCCCTCGTTCGTTGCTGCCCCCTCCTaGCACCCCTCCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EGSLGERPGLWVSQQPSFVAAPS*HPSGSC
Trigger: GCAGCTGCCGGAGGGGTGCCAGGAGGGGGCAGCAAC...GAACGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTCCCCGAGTGAGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR TCA 90 bp CCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCTTTGCCCCCAGGAGTaGGCCGGGAAATGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PALPRNAGPRLQAPQARGLCPQE*AGKWRG
Trigger: CCCTCTCCATTTCCCGGCTCACTCCTGGGGGCAAAG...GCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCGAGCTTCGATGTGTGTaGGGCTACCCGCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: PRNAGPRLQAPQARGHRGELRCV*GYPHSR
Trigger: GCGAGAATGCGGGTAGCCTCACACACATCGAAGCTC...GCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGGCATTCTCGCCATCGATaGTCAGCACCCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RLQAPQARGHRGSCGQKGHSRHR*SAPSHP
Trigger: TGGGTGACTGGGTGCTGAGCATCGATGGCGAGAATG...CCCCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp TACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGAGGGAGACGCTGGGTaGAAAGGTGTACCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: YPEMQGHDSRPLRLGATAEGDAG*KGVPRR
Trigger: CCTCCGCGGTACACCTTTGCACCCAGCGTCTCCCTC...CGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp TTTTGTCCGGGGCATAGCGCTCGGCAAACGCAGGGTCCACAGCCCAGGGCGGGCGAGGGAGACGCTGGGTaGAAAGGTGTACCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: FCPGHSARQTQGPQPRAGEGDAG*KGVPRR
Trigger: CCTCCGCGGTACACCTTTGCACCCAGCGTCTCCCTC...GCCCGCCCTGGGCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAGTGGCCGGCTGGCTGTaGCGGGTCAGCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PGSGQEPGLRQPLPALPRVAGWL*RVSTVL
Trigger: GAGCACAGTGCTGACCCGGCACAGCCAGCCGGCCAC...TCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGAGTCTTGCCGTTGTTaGTGCCCCCTCCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: PYPEMQGHDSRPLRLGATESCRC*CPLLAP
Trigger: GGGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTC...GGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CAGCACTGTGCTCGTTTTGTCCGGGGCATAGCGCTCGGCAAACGCAGGGTCCACATGCCGGCTCCTGCTTaGCCCGGCCAGGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: QHCARFVRGIALGKRRVHMPAPA*PGQGAA
Trigger: AGCAGCGCCCTGGCCGGGCCAAGCAGGAGCCGGCAT...GTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACGAGCACAGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGACCAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGGCTGCTTGCTGGCATCTaGGACCAGCGGTCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GPAVGAAVCQGSAPILLRLLAGI*DQRSER
Trigger: CCGCTCCGACCGCTGGTCCCAGATGCCAGCAAGCAG...CCGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR CCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAACGTGGGCAGAGCGCTaGTGGTGCCAGTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPTWAER*WCQSRR
Trigger: CCTCCGGGACTGGCACCACCAGCGCTCTGCCCACGT...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CCA 90 bp TGGGGCTTCTGTCCTGGGCACCTGGCTGCAAGATCTGCCATTCAAGGCCCTGCAGGCTCTGCAGCGGCGTaGGCGTGGCCGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: WGFCPGHLAARSAIQGPAGSAAA*AWPAGC
Trigger: ACAGCCAGCCGGCCACGCCCACGCCGCTGCAGAGCC...TGCAGGGCCTTGAATGGCAGATCTTGCAGCCAGGTGCCCAGGACAGAAGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR CCA 90 bp GCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCGGCTCTGCAGCGGCGTaGGCGTGGCCGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AGCIAHVIAWWAEDGALLGSAAA*AWPAGC
Trigger: ACAGCCAGCCGGCCACGCCCACGCCGCTGCAGAGCC...GAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCCAGCTGCCTGCACAATaGAGGTGCGGCTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PYPEMQGHDSRPLRLGATQLPAQ*RCGSAA
Trigger: CGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTG...GGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGTTGCTGCCCCCTCCTaGCACCCCTCCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQVAAPS*HPSGSC
Trigger: GCAGCTGCCGGAGGGGTGCCAGGAGGGGGCAGCAAC...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp AGCCCCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCCACCGCGGCAGCTGTaGGCAGAAGGGGCTCACACA +
Preference number: 4 (lower is better)
Translates to: SPRLGPGARVKATIASPTPPRQL*AEGAHT
Trigger: TGTGTGAGCCCCTTCTGCCCACAGCTGCCGCGGTGG...GGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp ACCAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGGGGGGGCCTGGGTGGAAGTaGGGCGCCTTCTGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: TSGRSGCLSGVCTHSAAGGPGWK*GAFCGL
Trigger: CAAACCGCAGAAGGCGCCCCACTTCCACCCAGGCCC...CCCCGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTGGT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR CCA 90 bp CTGGGACCAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGAGGTGGGGGCCTGGGTaGAAGTGGGGCGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGPAVGAAVCQGSAPILLRWGPG*KWGAFC
Trigger: GCAGAAGGCGCCCCACTTCCACCCAGGCCCCCACCT...CAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTGGTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR TCA 90 bp AGCCCCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCTTTGCCCCCAGGAGTaGGCCGGGAAATGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SPRLGPGARVKATIASPTLCPQE*AGKWRG
Trigger: CCCTCTCCATTTCCCGGCTCACTCCTGGGGGCAAAG...GGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGCCCGGATCTTGTTCTaGGCTTCGATGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRARILF*ASMCVR
Trigger: CCTCACACACATCGAAGCTCAGAACAAGATCCGGGC...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGGCCGGGCCGTCTTGTTaGGGGAGACGCTGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQAGPSC*GRRWVQ
Trigger: TTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGC...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR TCA 90 bp CGGGGAGAGACCTGGACTGTGGGTTTCCCAGCAGCCCTCGTTCCCACTGACAGGGCCGGGCCGTCTTGTTaGGGGAGACGCTGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: RGETWTVGFPAALVPTDRAGPSC*GRRWVQ
Trigger: TTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGC...CCTGTCAGTGGGAACGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR TCA 90 bp CTTCCCACACTGGCTACACACAAACTCCTCCGGGTGGTACGCGTGGCCCAGCGCGCCGGGCCGTCTTGTTaGGGGAGACGCTGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LPTLATHKLLRVVRVAQRAGPSC*GRRWVQ
Trigger: TTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGC...GCGCTGGGCCACGCGTACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCACCTTGTGGCACTGGTaGCACACGGGAGTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PALPRNAGPRLQAPQARGTLWHW*HTGVLP
Trigger: CGGCAAGACTCCCGTGTGTCACCAGTGCCACAAGGT...GCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCACCGGAAGCCCCAAGGTaGTGGCCCCTCCAGCACTAC +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPPEAPR*WPLQHY
Trigger: GTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTCCGG...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR GCA 90 bp ACTGCCGAGTTGGATTCCAGGTCCCACTGGGGTAGGGATGGGAAGGGCAGCTTCACGGCCACTCCGGCCTaGGCCGCTTTGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TAELDSRSHWGRDGKGSFTATPA*AALPPG
Trigger: TCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGT...GAAGCTGCCCTTCCCATCCCTACCCCAGTGGGACCTGGAATCCAACTCGGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR GCA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGCATTCTCGCCATCGATaGTCAGCACCCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRHSRHR*SAPSHP
Trigger: TGGGTGACTGGGTGCTGAGCATCGATGGCGAGAATG...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GACCAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGGGGAGGGAGACGCTGGGTaGAAAGGTGTACCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: DQRSERLFVRGLHPFCCGEGDAG*KGVPRR
Trigger: CCTCCGCGGTACACCTTTGCACCCAGCGTCTCCCTC...CCCGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR GCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGAGCGGCTGTCCATTCTaGTGCGGGGCGCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQSGCPF*CGALSA
Trigger: CGCTGACAGCGCCCCGCAGCAGAATGGACAGCCGCT...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR GCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGGGCCGGGCTACGACTaGACGTTGAGCACGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPGPGYD*TLSTWA
Trigger: TGCCCACGTGCTCAACGTGCAGTCGTAGCCCGGCCC...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR GCA 90 bp TACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGACGAAGCAGGTGTCATaGCAGCTGAAGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YPEMQGHDSRPLRLGATATKQVS*QLKPRA
Trigger: GGCCCTGGGCTTCAGCTGGCATGACACCTGCTTCGT...CGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp AATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGAAGCCCCAAGGTGCTaGCCCCTCCAGCACTACTTT +
Preference number: 4 (lower is better)
Translates to: NAGPRLQAPQARGHRGSCEAPRC*PLQHYF
Trigger: AAAGTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTC...ACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCACTGCTTGCTGGCATCTaGGACCAGCGGTCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPLLAGI*DQRSER
Trigger: CCGCTCCGACCGCTGGTCCCAGATGCCAGCAAGCAG...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CCA 90 bp GCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCGGAAGGAACGCGACTaGCCTGTCCCCGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: ARVKATIASPTQKCRATTRKERD*PVPGRG
Trigger: GCCGCGGCCGGGGACAGGCCAGTCGCGTTCCTTCCG...AGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGGAGGCGGGTGTAGCGTaGGCTCTGCAGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQEAGVA*ALQLQD
Trigger: GTCCTGGAGCTGCAGAGCCCACGCTACACCCGCCTC...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGTCAGATGAACCCAGGTaGGCGGCCAGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQSDEPR*AARARP
Trigger: TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGA...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CCA 90 bp CGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGGATGGTGGGCAGAAGATaGCGCCCTTCTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: RLQAPQARGHRGSCGQKGMVGRR*RPSPQR
Trigger: TCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCAT...CCCCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCGCGCACGTCATAGCATaGTGGGCAGAAGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: PALPRNAGPRLQAPQARGAHVIA*WAEDGA
Trigger: GGCGCCATCTTCTGCCCACCATGCTATGACGTGCGC...GCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CCGGAGGGCTCACTCGGGGAGAGACCTGGACTGTGGGTTTCCCAGCAGCCCTCGGCGCACGTCATAGCATaGTGGGCAGAAGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: PEGSLGERPGLWVSQQPSAHVIA*WAEDGA
Trigger: GGCGCCATCTTCTGCCCACCATGCTATGACGTGCGC...CGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTCCCCGAGTGAGCCCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CCA 90 bp GGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGTCTTCTTCTTGCACTTaGCACAGCTGGGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: GPRLQAPQARGHRGSCGQSSSCT*HSWVHS
Trigger: GCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGA...CTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGTGGAAACTGCCGAGTTaGATTCCAGGTCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRWKLPS*IPGPTG
Trigger: CCCAGTGGGACCTGGAATCCAACTCGGCAGTTTCCA...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR TCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCACTTTGCCCCCAGGAGTaGGCCGGGAAATGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPLCPQE*AGKWRG
Trigger: CCCTCTCCATTTCCCGGCTCACTCCTGGGGGCAAAG...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR TCA 90 bp CGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGGGGCGCTGGAGCTTCGATGTGTGTaGGGCTACCCGCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: RSERLFVRGLHPFCCGALELRCV*GYPHSR
Trigger: GCGAGAATGCGGGTAGCCTCACACACATCGAAGCTC...CAGCGCCCCGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR TCA 90 bp AATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGCCCGGATCTTGTTCTaGGCTTCGATGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: NAGPRLQAPQARGHRGSCARILF*ASMCVR
Trigger: CCTCACACACATCGAAGCTCAGAACAAGATCCGGGC...ACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGTTCTGCGGTTTGCTCTaGACCGGCTGGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQFCGLL*TGWALL
Trigger: CAGCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAA...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR TCA 90 bp TCTGGGACCAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCCGGGCCGTCTTGTTaGGGGAGACGCTGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SGTSGRSGCLSGVCTHSAAGPSC*GRRWVQ
Trigger: TTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGC...AGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTGGTCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR TCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGGCTACGACTGCACGTTaGGCACGTGGGCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQATTAR*ARGQSA
Trigger: AGCGCTCTGCCCACGTGCTCAACGTGCAGTCGTAGC...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR TCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGAAGGCAGTGTCAGATaGACCCAGGTGGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPEGSVR*TQVGGQ
Trigger: CTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTC...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR TCA 90 bp CCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCCTGGGCACCTGGCTTaGTTTCTTCAGGTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PALPRNAGPRLQAPQARGPGHLA*FLQVLL
Trigger: GAGGAGCACCTGAAGAAATCAAGCCAGGTGCCCAGG...GCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000493815.5
CDS-3UTR TCA 90 bp GTGGTGGTGGAGGGAGTGGGGTGGGAGGATAAGGTGGGTGGGGCAGGGCCCAGGCCCCAGCGTCGATCTTaGAGTCACAGCCATGGCATT +
Preference number: 4 (lower is better)
Translates to: VVVEGVGWEDKVGGAGPRPQRRS*SHSHGI
Trigger: AATGCCATGGCTGTGACTTCAAGATCGACGCTGGGG...CCTGGGCCCTGCCCCACCCACCTTATCCTCCCACCCCACTCCCTCCACCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGGCCTTCCAGGTTGATCTaGCATATCGCACAGACGAAG +
Preference number: 4 (lower is better)
Translates to: RLQAPQARGHRGSCGQKGPSRLI*HIAQTK
Trigger: CTTCGTCTGTGCGATATGTCAGATCAACCTGGAAGG...CCCCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GTGGTGGTGGAGGGAGTGGGGTGGGAGGATAAGGTGGGTGGGGCAGGGCCCAGGCATTCTCGCCATCGATaGTCAGCACCCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: VVVEGVGWEDKVGGAGPRHSRHR*SAPSHP
Trigger: TGGGTGACTGGGTGCTGAGCATCGATGGCGAGAATG...CCTGGGCCCTGCCCCACCCACCTTATCCTCCCACCCCACTCCCTCCACCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGAGGCCTTCTGCGGTTTaGTCTGAACCGGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQRPSAV*SEPAGP
Trigger: GGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGCCT...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR GCA 90 bp CCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAGGCCTTCTGCGGTTTaGTCTGAACCGGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PGSGQEPGLRQPLPALPRRPSAV*SEPAGP
Trigger: GGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGCCT...TCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGGAGGGAGACGCTGGGTaGAAAGGTGTACCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQEGDAG*KGVPRR
Trigger: CCTCCGCGGTACACCTTTGCACCCAGCGTCTCCCTC...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR GCA 90 bp CCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTGAGGGAGACGCTGGGTaGAAAGGTGTACCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PLPALPRNAGPRLQAPQAEGDAG*KGVPRR
Trigger: CCTCCGCGGTACACCTTTGCACCCAGCGTCTCCCTC...AGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGAGCGGCTGTCCATTCTaGTGCGGGGCGCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQSGCPF*CGALSA
Trigger: CGCTGACAGCGCCCCGCAGCAGAATGGACAGCCGCT...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355841.7
ENST00000486828.6
CDS-3UTR GCA 90 bp AGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGCGCCAGGGCGCTGCTCTaGGTCGGGCTCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SARHSMVGRRWRPSPQRSARALL*VGLQGA
Trigger: GGCTCCCTGGAGCCCGACGCAGAGCAGCGCCCTGGC...GCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393551.5
ENST00000486828.6
CDS-3UTR GCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGCCTGCACAATGGAGGTaGGGCTCTGCAGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQPAQWR*GSAAAW
Trigger: CCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGG...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCTCCTCCATGTAGAAGGCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGCCTGCACAATGGAGGTaGGGCTCTGCAGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PPPCRRPCSGWASCRQHRPAQWR*GSAAAW
Trigger: CCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGG...CCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGCCTCCGGCAGCTGCCTaGACAATGGAGGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQPPAAA*TMEVRL
Trigger: GAGCCGCACCTCCATTGTGCAGGCAGCTGCCGGAGG...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AGCCCCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCGACACACGGGAGTCTTaGCGTTGTTGCTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SPRLGPGARVKATIASPTDTRES*RCCCPL
Trigger: GAGGGGGCAGCAACAACGGCAAGACTCCCGTGTGTC...GGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGAGAAGGCATGGCTCTTaGAGAGAGGCCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRRRHGS*REACPS
Trigger: AGAAGGACAGGCCTCTCTGCAAGAGCCATGCCTTCT...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GTTCCCACTGACAGGCTTGGGACCACCTCCCCGCCAGCCAGCCCTACTCACGCCGAAGCCCCAAGGTGCTaGCCCCTCCAGCACTACTTT +
Preference number: 4 (lower is better)
Translates to: VPTDRLGTTSPPASPTHAEAPRC*PLQHYF
Trigger: AAAGTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTC...GGCGTGAGTAGGGCTGGCTGGCGGGGAGGTGGTCCCAAGCCTGTCAGTGGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CCA 90 bp AGGCCAGTACAGCAGCCCATTTATTACGCTGGTAAGGACCCGGAGGGCTCACTCCGGAAGGAACGCGACTaGCCTGTCCCCGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RPVQQPIYYAGKDPEGSLRKERD*PVPGRG
Trigger: GCCGCGGCCGGGGACAGGCCAGTCGCGTTCCTTCCG...GAGTGAGCCCTCCGGGTCCTTACCAGCGTAATAAATGGGCTGCTGTACTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCATGCACGTTGAGCACGTaGGCAGAGCGCTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPCTLST*AERWWC
Trigger: GCACCACCAGCGCTCTGCCCACGTGCTCAACGTGCA...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CCA 90 bp CCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCGTGGGCGTGGCCGGCTaGCTGTGCCGGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: PGLRQPLPALPRNAGPRLVGVAG*LCRVST
Trigger: AGTGCTGACCCGGCACAGCCAGCCGGCCACGCCCAC...GAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGCAGCTGTGGGCAGAAGGGGCTCACACATGAGAGAAGGCATGGCTCTTGCAGAGTGGGCGTGGCCGGCTaGCTGTGCCGGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: GSCGQKGLTHERRHGSCRVGVAG*LCRVST
Trigger: AGTGCTGACCCGGCACAGCCAGCCGGCCACGCCCAC...TCTGCAAGAGCCATGCCTTCTCTCATGTGTGAGCCCCTTCTGCCCACAGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GTGGTGGTGGAGGGAGTGGGGTGGGAGGATAAGGTGGGTGGGGCAGGGCCCAGGTGCACTTGGCACAGCTaGGTGCATAGCGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: VVVEGVGWEDKVGGAGPRCTWHS*VHSARH
Trigger: ATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCA...CCTGGGCCCTGCCCCACCCACCTTATCCTCCCACCCCACTCCCTCCACCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CAGCACTGTGCTCGTTTTGTCCGGGGCATAGCGCTCGGCAAACGCAGGGTCCACCCACCGCGGCAGCTGTaGGCAGAAGGGGCTCACACA +
Preference number: 4 (lower is better)
Translates to: QHCARFVRGIALGKRRVHPPRQL*AEGAHT
Trigger: TGTGTGAGCCCCTTCTGCCCACAGCTGCCGCGGTGG...GTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACGAGCACAGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp ATTACGCTGGTAAGGACCCGGAGGGCTCACTCGGGGAGAGACCTGGACTGTGGGCTTTGCCCCCAGGAGTaGGCCGGGAAATGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ITLVRTRRAHSGRDLDCGLCPQE*AGKWRG
Trigger: CCCTCTCCATTTCCCGGCTCACTCCTGGGGGCAAAG...CCCACAGTCCAGGTCTCTCCCCGAGTGAGCCCTCCGGGTCCTTACCAGCGTAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR TCA 90 bp CAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGGGGCGGCCCGGATCTTGTTCTaGGCTTCGATGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: QRSERLFVRGLHPFCCGAARILF*ASMCVR
Trigger: CCTCACACACATCGAAGCTCAGAACAAGATCCGGGC...CGCCCCGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR TCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGTTCTGCGGTTTGCTCTaGACCGGCTGGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQFCGLL*TGWALL
Trigger: CAGCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAA...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp ACGCTGGTAAGGACCCGGAGGGCTCACTCGGGGAGAGACCTGGACTGTGGGTTTTTCTGCGGTTTGCTCTaGACCGGCTGGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLVRTRRAHSGRDLDCGFFCGLL*TGWALL
Trigger: CAGCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAA...AAACCCACAGTCCAGGTCTCTCCCCGAGTGAGCCCTCCGGGTCCTTACCAGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR TCA 90 bp TCTGGGACCAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTTTCTGCGGTTTGCTCTaGACCGGCTGGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SGTSGRSGCLSGVCTHSAFCGLL*TGWALL
Trigger: CAGCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAA...AGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTGGTCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR TCA 90 bp CCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTACCTTGTGGCACTGGTaGCACACGGGAGTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PLPALPRNAGPRLQAPQATLWHW*HTGVLP
Trigger: CGGCAAGACTCCCGTGTGTCACCAGTGCCACAAGGT...AGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CGCGTGGCCCAGCGCCACCAGGTAGCGGCCCCGGATGACCTTGTGGCACTGGTGCCTTCCAGGTTGATCTaGCATATCGCACAGACGAAG +
Preference number: 4 (lower is better)
Translates to: RVAQRHQVAAPDDLVALVPSRLI*HIAQTK
Trigger: CTTCGTCTGTGCGATATGTCAGATCAACCTGGAAGG...CACCAGTGCCACAAGGTCATCCGGGGCCGCTACCTGGTGGCGCTGGGCCACGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CTCACTCGGGGAGAGACCTGGACTGTGGGTTTCCCAGCAGCCCTCGTTCCCACTAGCCCTCGTTCCCACTaGCAGGCTTGGGACCACCTC +
Preference number: 4 (lower is better)
Translates to: LTRGETWTVGFPAALVPTSPRSH*QAWDHL
Trigger: GAGGTGGTCCCAAGCCTGTCAGTGGGAACGAGGGCT...AGTGGGAACGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTCCCCGAGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp TGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCGGAAGCCCCAAGGTaGTGGCCCCTCCAGCACTAC +
Preference number: 4 (lower is better)
Translates to: WHSWVHSARHSMVGRRWRPEAPR*WPLQHY
Trigger: GTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTCCGG...GCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp ACGCTGGTAAGGACCCGGAGGGCTCACTCGGGGAGAGACCTGGACTGTGGGTTTGAGGGAGACGCTGGGTaGAAAGGTGTACCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: TLVRTRRAHSGRDLDCGFEGDAG*KGVPRR
Trigger: CCTCCGCGGTACACCTTTGCACCCAGCGTCTCCCTC...AAACCCACAGTCCAGGTCTCTCCCCGAGTGAGCCCTCCGGGTCCTTACCAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp CCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTGCCGGGTCAGCACTGTaGTCGTTTTGTCCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PLPALPRNAGPRLQAPQAAGSAL*SFCPGH
Trigger: ATGCCCCGGACAAAACGAGCACAGTGCTGACCCGGC...AGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGTGGCCGGCTGGCTGTaGCGGGTCAGCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQVAGWL*RVSTVL
Trigger: GAGCACAGTGCTGACCCGGCACAGCCAGCCGGCCAC...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGAGTGGCCGGCTGGCTGTaGCGGGTCAGCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: EPGLRQPLPALPRNAGPRVAGWL*RVSTVL
Trigger: GAGCACAGTGCTGACCCGGCACAGCCAGCCGGCCAC...TCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTGTGGCCGGCTGGCTGTaGCGGGTCAGCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALVAGWL*RVSTVL
Trigger: GAGCACAGTGCTGACCCGGCACAGCCAGCCGGCCAC...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GTTCCCACTGACAGGCTTGGGACCACCTCCCCGCCAGCCAGCCCTACTCACGCCCTTGGCACAGCTGGGTaGATAGCGCACGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: VPTDRLGTTSPPASPTHALGTAG*IAHVIA
Trigger: TGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAG...GGCGTGAGTAGGGCTGGCTGGCGGGGAGGTGGTCCCAAGCCTGTCAGTGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp CCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCCTGGCTGCAAGATCTaGCATTCAAGGCCCTGCATG +
Preference number: 4 (lower is better)
Translates to: PALPRNAGPRLQAPQARGPGCKI*HSRPCM
Trigger: CATGCAGGGCCTTGAATGGCAGATCTTGCAGCCAGG...GCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR GCA 90 bp TGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCGGTCTGCACCCATTCTaGTGCGGGGCGCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: WHSWVHSARHSMVGRRWRGLHPF*CGALSA
Trigger: CGCTGACAGCGCCCCGCAGCAGAATGGGTGCAGACC...GCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493815.5
CDS-3UTR CCA 90 bp AGCCCCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCGAAGCCCCAAGGTGCTaGCCCCTCCAGCACTACTTT +
Preference number: 4 (lower is better)
Translates to: SPRLGPGARVKATIASPTEAPRC*PLQHYF
Trigger: AAAGTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTC...GGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CATCTTCTCATAGTCTCGCTCGCAATAGGGCACGCCCTCCTCCATGTAGAAGGCCGGAAGGAACGCGACTaGCCTGTCCCCGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: HLLIVSLAIGHALLHVEGRKERD*PVPGRG
Trigger: GCCGCGGCCGGGGACAGGCCAGTCGCGTTCCTTCCG...GCCTTCTACATGGAGGAGGGCGTGCCCTATTGCGAGCGAGACTATGAGAAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp AGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGCGTGGGCGTGGCCGGCTaGCTGTGCCGGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: SARHSMVGRRWRPSPQRSVGVAG*LCRVST
Trigger: AGTGCTGACCCGGCACAGCCAGCCGGCCACGCCCAC...GCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CCTCCTCCATGTAGAAGGCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGCAGCTGCCTGCACAATaGAGGTGCGGCTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PPPCRRPCSGWASCRQHRQLPAQ*RCGSAA
Trigger: CGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTG...CCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp ATTCCAGGTCCCACTGGGGTAGGGATGGGAAGGGCAGCTTCTCCTAGCAATGTCGTTGCTGCCCCCTCCTaGCACCCCTCCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IPGPTGVGMGRAASPSNVVAAPS*HPSGSC
Trigger: GCAGCTGCCGGAGGGGTGCCAGGAGGGGGCAGCAAC...GACATTGCTAGGAGAAGCTGCCCTTCCCATCCCTACCCCAGTGGGACCTGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR CCA 90 bp TTTTGTCCGGGGCATAGCGCTCGGCAAACGCAGGGTCCACAGCCCAGGGCGGGCCACGTCATAGCATGGTaGGCAGAAGATGGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: FCPGHSARQTQGPQPRAGHVIAW*AEDGAL
Trigger: AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTG...GCCCGCCCTGGGCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGAGGCCCTGTTCCGGATaGGCGTCTTGCAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQRPCSG*ASCRQH
Trigger: GTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCT...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGCCACCGCGGCAGCTGTaGGCAGAAGGGGCTCACACA +
Preference number: 4 (lower is better)
Translates to: GPGARVKATIASPTQKCRPPRQL*AEGAHT
Trigger: TGTGTGAGCCCCTTCTGCCCACAGCTGCCGCGGTGG...CCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CCTCCTCCATGTAGAAGGCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGGAGGTGAAAGGGGGCTaGTGTGGCCAGCACCGGTGT +
Preference number: 4 (lower is better)
Translates to: PPPCRRPCSGWASCRQHREVKGG*CGQHRC
Trigger: ACACCGGTGCTGGCCACACCAGCCCCCTTTCACCTC...CCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGAGGTGAAAGGGGGCTaGTGTGGCCAGCACCGGTGT +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQEVKGG*CGQHRC
Trigger: ACACCGGTGCTGGCCACACCAGCCCCCTTTCACCTC...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGAGCTTCGATGTGTGTaGGGCTACCCGCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPELRCV*GYPHSR
Trigger: GCGAGAATGCGGGTAGCCTCACACACATCGAAGCTC...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR TCA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTGGTAGCGGCCCCGGATaGCCTTGTGGCACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALGSGPG*PCGTGD
Trigger: GTCACCAGTGCCACAAGGTCATCCGGGGCCGCTACC...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTTGGCCCCACGGGAGATaGCTGGGGGCGTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALWPHGR*LGAWKL
Trigger: CAGTTTCCACGCCCCCAGTCATCTCCCGTGGGGCCA...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR GCA 90 bp TGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAACGGCCACTCCGGCCTaGGCCGCTTTGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CIAHVIAWWAEDGALLLKTATPA*AALPPG
Trigger: TCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGT...TTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCTGCACAATGGAGGTaGGGCTCTGCAGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ARVKATIASPTQKCRATTPAQWR*GSAAAW
Trigger: CCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGG...AGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGCACCCCTCCGGCAGCTaGCTGCACAATGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQHPSGS*LHNGGA
Trigger: CGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTG...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp TTGGGACCACCTCCCCGCCAGCCAGCCCTACTCACGCCTGTAATCTTCTTCTTGCACCCCTCCGGCAGCTaGCTGCACAATGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: LGPPPRQPALLTPVIFFLHPSGS*LHNGGA
Trigger: CGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTG...CAAGAAGAAGATTACAGGCGTGAGTAGGGCTGGCTGGCGGGGAGGTGGTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCACCCCTCCGGCAGCTaGCTGCACAATGGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALHPSGS*LHNGGA
Trigger: CGCACCTCCATTGTGCAGGCAGCTGCCGGAGGGGTG...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGGAGTCTTGCCGTTGTTaGTGCCCCCTCCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: GARVKATIASPTQKCRATESCRC*CPLLAP
Trigger: GGGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTC...CGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCTCCTCCATGTAGAAGGCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGACGAAGCAGGTGTCATaGCAGCTGAAGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPPCRRPCSGWASCRQHRTKQVS*QLKPRA
Trigger: GGCCCTGGGCTTCAGCTGGCATGACACCTGCTTCGT...CCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGATGCCGGCTCCTGCTTaGCCCGGCCAGGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLLALGTAGCIAHVIAWWMPAPA*PGQGAA
Trigger: AGCAGCGCCCTGGCCGGGCCAAGCAGGAGCCGGCAT...CCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGAAGCCCCAAGGTGCTaGCCCCTCCAGCACTACTTT +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPEAPRC*PLQHYF
Trigger: AAAGTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTC...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CCA 90 bp TTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCTGCTTGCTGGCATCTaGGACCAGCGGTCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LRQPLPALPRNAGPRLQALLAGI*DQRSER
Trigger: CCGCTCCGACCGCTGGTCCCAGATGCCAGCAAGCAG...GGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGCTGCTTGCTGGCATCTaGGACCAGCGGTCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQLLAGI*DQRSER
Trigger: CCGCTCCGACCGCTGGTCCCAGATGCCAGCAAGCAG...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGCATTTCGTGCCAAACATCTTCTCATAGTCTCGCTCGCAATAGGGCACGCCCTCGGAAGGAACGCGACTaGCCTGTCCCCGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GISCQTSSHSLARNRARPRKERD*PVPGRG
Trigger: GCCGCGGCCGGGGACAGGCCAGTCGCGTTCCTTCCG...AGGGCGTGCCCTATTGCGAGCGAGACTATGAGAAGATGTTTGGCACGAAATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGACAAACTCCTCCGGGTaGTACGCGTGGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQTNSSG*YAWPSA
Trigger: GGCGCTGGGCCACGCGTACCACCCGGAGGAGTTTGT...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTACAAACTCCTCCGGGTaGTACGCGTGGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALTNSSG*YAWPSA
Trigger: GGCGCTGGGCCACGCGTACCACCCGGAGGAGTTTGT...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCATGGTGGGCAGAAGATaGCGCCCTTCTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PYPEMQGHDSRPLRLGATMVGRR*RPSPQR
Trigger: TCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCAT...GGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CAGCACTGTGCTCGTTTTGTCCGGGGCATAGCGCTCGGCAAACGCAGGGTCCACGCGCACGTCATAGCATaGTGGGCAGAAGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: QHCARFVRGIALGKRRVHAHVIA*WAEDGA
Trigger: GGCGCCATCTTCTGCCCACCATGCTATGACGTGCGC...GTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACGAGCACAGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGGCTCACTCGGGGAGAGACCTGGACTGTGGGTTTCCCAGCAGCCCTCGTTCCCTGCACTTGGCACAGCTaGGTGCATAGCGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: GLTRGETWTVGFPAALVPCTWHS*VHSARH
Trigger: ATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCA...GGGAACGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTCCCCGAGTGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CCA 90 bp ATTACGCTGGTAAGGACCCGGAGGGCTCACTCGGGGAGAGACCTGGACTGTGGGGAGAGACCTGGACTGTaGGTTTCCCAGCAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: ITLVRTRRAHSGRDLDCGERPGL*VSQQPS
Trigger: CGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTC...CCCACAGTCCAGGTCTCTCCCCGAGTGAGCCCTCCGGGTCCTTACCAGCGTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393551.5
3UTR CAA 72 bp CCACGGGAGATGACTGGGGGCGTGGAAACTGCCGAGTaGGATTCCAGGTCCCACTGGGGTAGGGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: PREMTGGVETAE*DSRSHWGRDGK
Trigger: CTTCCCATCCCTACCCCAGTGGGACCTGGAATCCAACTCGGCAGTTTCCACGCCCCCAGTCATCTCCCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR TCA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGGCCCGGATCTTGTTCTaGGCTTCGATGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQARILF*ASMCVR
Trigger: CCTCACACACATCGAAGCTCAGAACAAGATCCGGGC...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR TCA 90 bp GCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTTTCTGCGGTTTGCTCTaGACCGGCTGGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ARVKATIASPTQKCRATTFCGLL*TGWALL
Trigger: CAGCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAA...AGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp AGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGTAGCGGCCCCGGATaGCCTTGTGGCACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: RVKATIASPTQKCRATTPGSGPG*PCGTGD
Trigger: GTCACCAGTGCCACAAGGTCATCCGGGGCCGCTACC...TGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCACATTCTCGCCATCGATaGTCAGCACCCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: QRGKAVSDEPRWAARARPHSRHR*SAPSHP
Trigger: TGGGTGACTGGGTGCTGAGCATCGATGGCGAGAATG...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR GCA 90 bp TGGGACCAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCCATTCTCGCCATCGATaGTCAGCACCCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: WDQRSERLFVRGLHPFCCHSRHR*SAPSHP
Trigger: TGGGTGACTGGGTGCTGAGCATCGATGGCGAGAATG...GCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR GCA 90 bp CTCTTCCAGGACCTTCCCACACTGGCTACACACAAACTCCTCCGGGTGGTACGCAGGCCTTCTGCGGTTTaGTCTGAACCGGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LFQDLPTLATHKLLRVVRRPSAV*SEPAGP
Trigger: GGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGCCT...GCGTACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCTGGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCAGGCCTTCTGCGGTTTaGTCTGAACCGGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LGTAGCIAHVIAWWAEDGRPSAV*SEPAGP
Trigger: GGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGCCT...GCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATAGCGGCTGTCCATTCTaGTGCGGGGCGCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: ALGTAGCIAHVIAWWAEDSGCPF*CGALSA
Trigger: CGCTGACAGCGCCCCGCAGCAGAATGGACAGCCGCT...ATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393551.5
ENST00000486828.6
CDS-3UTR GCA 90 bp GGACCACCTCCCCGCCAGCCAGCCCTACTCACGCCTGTAATCTTCTTCTTGCACGCCGGGTCAGCACTGTaGTCGTTTTGTCCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: GPPPRQPALLTPVIFFLHAGSAL*SFCPGH
Trigger: ATGCCCCGGACAAAACGAGCACAGTGCTGACCCGGC...GTGCAAGAAGAAGATTACAGGCGTGAGTAGGGCTGGCTGGCGGGGAGGTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp AGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCACCTGCACAATGGAGGTaGGGCTCTGCAGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RVKATIASPTQKCRATTPPAQWR*GSAAAW
Trigger: CCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGG...TGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATCCTGCACAATGGAGGTaGGGCTCTGCAGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ALGTAGCIAHVIAWWAEDPAQWR*GSAAAW
Trigger: CCACGCCGCTGCAGAGCCGCACCTCCATTGTGCAGG...ATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGAGTCTTGCCGTTGTTaGTGCCCCCTCCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: LGTAGCIAHVIAWWAEDGESCRC*CPLLAP
Trigger: GGGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTC...GCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGACTTGGCACAGCTGGGTaGATAGCGCACGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: PGSGQEPGLRQPLPALPRLGTAG*IAHVIA
Trigger: TGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAG...TCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AGCCCCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCGCACAGGTAAAGCAGTaGACGTGCCAGGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SPRLGPGARVKATIASPTAQVKQ*TCQVIF
Trigger: GAAGATGACCTGGCACGTGCACTGCTTTACCTGTGC...GGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AGCCCCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCAGAAGGCATGGCTCTTaGAGAGAGGCCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPRLGPGARVKATIASPTRRHGS*REACPS
Trigger: AGAAGGACAGGCCTCTCTGCAAGAGCCATGCCTTCT...GGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGAGCCCTACCCAGAAATaGAGGGCCACGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GQEPGLRQPLPALPRNAGSPTQK*RATTPG
Trigger: GCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCT...CCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTTCCTGGGCACCTGGCTaGAAGATCTGCCATTCAAGG +
Preference number: 4 (lower is better)
Translates to: PLPALPRNAGPRLQAPQASWAPG*KICHSR
Trigger: CCTTGAATGGCAGATCTTGCAGCCAGGTGCCCAGGA...AGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR CCA 90 bp CACTGTGCTCGTTTTGTCCGGGGCATAGCGCTCGGCAAACGCAGGGTCCACAGCGAAGCCCCAAGGTGCTaGCCCCTCCAGCACTACTTT +
Preference number: 4 (lower is better)
Translates to: HCARFVRGIALGKRRVHSEAPRC*PLQHYF
Trigger: AAAGTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTC...GCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACGAGCACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CTCCATGTAGAAGGCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGTAAACTGCTTGCTGGCATCTaGGACCAGCGGTCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LHVEGPVPDGRLAGSTGKLLAGI*DQRSER
Trigger: CCGCTCCGACCGCTGGTCCCAGATGCCAGCAAGCAG...TTTACCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CTTCCCACACTGGCTACACACAAACTCCTCCGGGTGGTACGCGTGGCCCAGCGCCACGTCATAGCATGGTaGGCAGAAGATGGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: LPTLATHKLLRVVRVAQRHVIAW*AEDGAL
Trigger: AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTG...GCGCTGGGCCACGCGTACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGATGCACTTGGCACAGCTaGGTGCATAGCGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: PGSGQEPGLRQPLPALPRCTWHS*VHSARH
Trigger: ATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCA...TCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCTCTTCTTCTTGCACTTaGCACAGCTGGGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: PALPRNAGPRLQAPQARGSSSCT*HSWVHS
Trigger: GCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGA...GCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGAAGGCCCTGTTCCGGATaGGCGTCTTGCAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: EPGLRQPLPALPRNAGPRRPCSG*ASCRQH
Trigger: GTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCT...TCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCGAGGTGAAAGGGGGCTaGTGTGGCCAGCACCGGTGT +
Preference number: 4 (lower is better)
Translates to: PGLRQPLPALPRNAGPRLEVKGG*CGQHRC
Trigger: ACACCGGTGCTGGCCACACCAGCCCCCTTTCACCTC...GAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACCCACGGGAGATGACTaGGGGCGTGGAAACTGCCGA +
Preference number: 4 (lower is better)
Translates to: EPGLRQPLPALPRNAGPRPTGDD*GRGNCR
Trigger: TCGGCAGTTTCCACGCCCCCAGTCATCTCCCGTGGG...TCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR TCA 90 bp GCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATCTTTGCCCCCAGGAGTaGGCCGGGAAATGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ALGTAGCIAHVIAWWAEDLCPQE*AGKWRG
Trigger: CCCTCTCCATTTCCCGGCTCACTCCTGGGGGCAAAG...ATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp GGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGGAGCTTCGATGTGTGTaGGGCTACCCGCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: GARVKATIASPTQKCRATELRCV*GYPHSR
Trigger: GCGAGAATGCGGGTAGCCTCACACACATCGAAGCTC...CGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CCTCCTCCATGTAGAAGGCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGGCCCGGATCTTGTTCTaGGCTTCGATGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PPPCRRPCSGWASCRQHRARILF*ASMCVR
Trigger: CCTCACACACATCGAAGCTCAGAACAAGATCCGGGC...CCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp AGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCATTCTGCGGTTTGCTCTaGACCGGCTGGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RVKATIASPTQKCRATTPFCGLL*TGWALL
Trigger: CAGCAGGGCCCAGCCGGTTCAGAGCAAACCGCAGAA...TGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCCGGGCCGTCTTGTTaGGGGAGACGCTGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LLLALGTAGCIAHVIAWWAGPSC*GRRWVQ
Trigger: TTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGC...CCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp GCGGTCCCCAGCGTCGATCTTGAAGTCACAGCCATGGCATTTCGTGCCAAACATGGTAGCGGCCCCGGATaGCCTTGTGGCACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: AVPSVDLEVTAMAFRAKHGSGPG*PCGTGD
Trigger: GTCACCAGTGCCACAAGGTCATCCGGGGCCGCTACC...ATGTTTGGCACGAAATGCCATGGCTGTGACTTCAAGATCGACGCTGGGGACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGCCCCAGCGTCGATCTTaGAGTCACAGCCATGGCATT +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQPQRRS*SHSHGI
Trigger: AATGCCATGGCTGTGACTTCAAGATCGACGCTGGGG...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CAGCCAGCCCTACTCACGCCTGTAATCTTCTTCTTGCACTTGGCACAGCTGGGTCCGGAAGCCCCAAGGTaGTGGCCCCTCCAGCACTAC +
Preference number: 4 (lower is better)
Translates to: QPALLTPVIFFLHLAQLGPEAPR*WPLQHY
Trigger: GTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTCCGG...ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGGCGTGAGTAGGGCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp CATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGCGGCTGTCCATTCTaGTGCGGGGCGCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: HSARHSMVGRRWRPSPQRSGCPF*CGALSA
Trigger: CGCTGACAGCGCCCCGCAGCAGAATGGACAGCCGCT...TCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393551.5
ENST00000486828.6
CDS-3UTR GCA 90 bp GAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGAGCCGGGTCAGCACTGTaGTCGTTTTGTCCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: EPGLRQPLPALPRNAGPRAGSAL*SFCPGH
Trigger: ATGCCCCGGACAAAACGAGCACAGTGCTGACCCGGC...TCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp TCTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGTGGCCGGCTGGCTGTaGCGGGTCAGCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SSSCTWHSWVHSARHSMVVAGWL*RVSTVL
Trigger: GAGCACAGTGCTGACCCGGCACAGCCAGCCGGCCAC...CACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGCCTCCGGCAGCTGCCTaGACAATGGAGGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LLLALGTAGCIAHVIAWWPPAAA*TMEVRL
Trigger: GAGCCGCACCTCCATTGTGCAGGCAGCTGCCGGAGG...CCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AGGCCAGTACAGCAGCCCATTTATTACGCTGGTAAGGACCCGGAGGGCTCACTCGAGTCTTGCCGTTGTTaGTGCCCCCTCCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: RPVQQPIYYAGKDPEGSLESCRC*CPLLAP
Trigger: GGGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTC...GAGTGAGCCCTCCGGGTCCTTACCAGCGTAATAAATGGGCTGCTGTACTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp GAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGAGACACACGGGAGTCTTaGCGTTGTTGCTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: EPGLRQPLPALPRNAGPRDTRES*RCCCPL
Trigger: GAGGGGGCAGCAACAACGGCAAGACTCCCGTGTGTC...TCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGCAGCTGTGGGCAGAAGGGGCTCACACATGAGAGAAGGCATGGCTCTTGCAGAGACACACGGGAGTCTTaGCGTTGTTGCTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GSCGQKGLTHERRHGSCRDTRES*RCCCPL
Trigger: GAGGGGGCAGCAACAACGGCAAGACTCCCGTGTGTC...TCTGCAAGAGCCATGCCTTCTCTCATGTGTGAGCCCCTTCTGCCCACAGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGCTTGGCACAGCTGGGTaGATAGCGCACGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQLGTAG*IAHVIA
Trigger: TGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAG...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AGCCCCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCGTCATCTTCAGGGCGTaGATGATCTCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: SPRLGPGARVKATIASPTVIFRA*MISPVI
Trigger: GATTACAGGCGAGATCATGCACGCCCTGAAGATGAC...GGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCAGCCCTACCCAGAAATaGAGGGCCACGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGLRQPLPALPRNAGPRLSPTQK*RATTPG
Trigger: GCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCT...GAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGCACCTTCTGCGGTTTaGTCTGAACCGGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RVKATIASPTQKCRATTPAPSAV*SEPAGP
Trigger: GGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGTGC...TGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359895.6
CDS-3UTR CCA 90 bp TGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAACTGCTTGCTGGCATCTaGGACCAGCGGTCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: CIAHVIAWWAEDGALLLKLLAGI*DQRSER
Trigger: CCGCTCCGACCGCTGGTCCCAGATGCCAGCAAGCAG...TTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp AGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCATCCAGGGAGCCTCGTTaGGATCGGCCGCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: RVKATIASPTQKCRATTPSREPR*DRPPVF
Trigger: GAACACTGGCGGCCGATCCCAACGAGGCTCCCTGGA...TGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355841.7
ENST00000486828.6
CDS-3UTR CCA 90 bp AATCTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGGTGGGCGTGGCCGGCTaGCTGTGCCGGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: NLLLALGTAGCIAHVIAWVGVAG*LCRVST
Trigger: AGTGCTGACCCGGCACAGCCAGCCGGCCACGCCCAC...CCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GCGGTCCCCAGCGTCGATCTTGAAGTCACAGCCATGGCATTTCGTGCCAAACATACAAACTCCTCCGGGTaGTACGCGTGGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: AVPSVDLEVTAMAFRAKHTNSSG*YAWPSA
Trigger: GGCGCTGGGCCACGCGTACCACCCGGAGGAGTTTGT...ATGTTTGGCACGAAATGCCATGGCTGTGACTTCAAGATCGACGCTGGGGACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGCACGTCATAGCATGGTaGGCAGAAGATGGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQHVIAW*AEDGAL
Trigger: AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTG...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GTGGTGGTGGAGGGAGTGGGGTGGGAGGATAAGGTGGGTGGGGCAGGGCCCAGGTTGAAGTCACAGCCATaGCATTTCGTGCCAAACATC +
Preference number: 4 (lower is better)
Translates to: VVVEGVGWEDKVGGAGPRLKSQP*HFVPNI
Trigger: GATGTTTGGCACGAAATGCCATGGCTGTGACTTCAA...CCTGGGCCCTGCCCCACCCACCTTATCCTCCCACCCCACTCCCTCCACCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTGAGCTTCGATGTGTGTaGGGCTACCCGCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALELRCV*GYPHSR
Trigger: GCGAGAATGCGGGTAGCCTCACACACATCGAAGCTC...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGAGCTTCGATGTGTGTaGGGCTACCCGCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: LGTAGCIAHVIAWWAEDGELRCV*GYPHSR
Trigger: GCGAGAATGCGGGTAGCCTCACACACATCGAAGCTC...GCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp GGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGGCCCGGATCTTGTTCTaGGCTTCGATGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GARVKATIASPTQKCRATARILF*ASMCVR
Trigger: CCTCACACACATCGAAGCTCAGAACAAGATCCGGGC...CGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp GCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCGCCCGGATCTTGTTCTaGGCTTCGATGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: AGCIAHVIAWWAEDGALLARILF*ASMCVR
Trigger: CCTCACACACATCGAAGCTCAGAACAAGATCCGGGC...GAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp GAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACCTGGGCACCTGGCTTaGTTTCTTCAGGTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: EPGLRQPLPALPRNAGPRPGHLA*FLQVLL
Trigger: GAGGAGCACCTGAAGAAATCAAGCCAGGTGCCCAGG...TCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CCAGCCAGCCCTACTCACGCCTGTAATCTTCTTCTTGCACTTGGCACAGCTGGGGGGGCGGTAGGGCCTTaGTTTCTTCAGGTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PASPTHACNLLLALGTAGGAVGP*FLQVLL
Trigger: GAGGAGCACCTGAAGAAATCAAGGCCCTACCGCCCC...CCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGGCGTGAGTAGGGCTGGCTGG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp CATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGCCACCCTCTTAGGCCTTCTGCGGTTTaGTCTGAACCGGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: HSMVGRRWRPSPQRSHPLRPSAV*SEPAGP
Trigger: GGGCCCAGCCGGTTCAGAGCAAACCGCAGAAGGCCT...AAGAGGGTGGCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGCCGGGTCAGCACTGTaGTCGTTTTGTCCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RVKATIASPTQKCRATTPAGSAL*SFCPGH
Trigger: ATGCCCCGGACAAAACGAGCACAGTGCTGACCCGGC...TGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCGCCAGCCAGCCCTACTCACGCCTGTAATCTTCTTCTTGCACTTGGCACAGCTGACACACGGGAGTCTTaGCGTTGTTGCTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: PPASPTHACNLLLALGTADTRES*RCCCPL
Trigger: GAGGGGGCAGCAACAACGGCAAGACTCCCGTGTGTC...AGCTGTGCCAAGTGCAAGAAGAAGATTACAGGCGTGAGTAGGGCTGGCTGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp ACCCTCTTCCAGGACCTTCCCACACTGGCTACACACAAACTCCTCCGGGTGGTAACGAAGCAGGTGTCATaGCAGCTGAAGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLFQDLPTLATHKLLRVVTKQVS*QLKPRA
Trigger: GGCCCTGGGCTTCAGCTGGCATGACACCTGCTTCGT...TACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCTGGAAGAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTGAAGCCCCAAGGTGCTaGCCCCTCCAGCACTACTTT +
Preference number: 4 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALEAPRC*PLQHYF
Trigger: AAAGTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTC...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp TCTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGCTGCTTGCTGGCATCTaGGACCAGCGGTCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SSSCTWHSWVHSARHSMVLLAGI*DQRSER
Trigger: CCGCTCCGACCGCTGGTCCCAGATGCCAGCAAGCAG...CACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGCTGGGGCTTCTGTCCTaGGCACCTGGCTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: GARVKATIASPTQKCRATLGLLS*APGLIS
Trigger: AGAAATCAAGCCAGGTGCCCAGGACAGAAGCCCCAG...CGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCTGGGGCTTCTGTCCTaGGCACCTGGCTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: GQEPGLRQPLPALPRNAGLGLLS*APGLIS
Trigger: AGAAATCAAGCCAGGTGCCCAGGACAGAAGCCCCAG...CCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CAGCCAGCCCTACTCACGCCTGTAATCTTCTTCTTGCACTTGGCACAGCTGGGTCAGCTGCCTGCACAATaGAGGTGCGGCTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: QPALLTPVIFFLHLAQLGQLPAQ*RCGSAA
Trigger: CGCTGCAGAGCCGCACCTCCATTGTGCAGGCAGCTG...ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGGCGTGAGTAGGGCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGAGGACCTTCCCACACTaGCTACACACAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQRTFPH*LHTNSS
Trigger: GGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCT...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGCGCACGTCATAGCATaGTGGGCAGAAGATGGCGCC +
Preference number: 4 (lower is better)
Translates to: ALGTAGCIAHVIAWWAEDAHVIA*WAEDGA
Trigger: GGCGCCATCTTCTGCCCACCATGCTATGACGTGCGC...ATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGGCCCTGTTCCGGATaGGCGTCTTGCAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HSARHSMVGRRWRPSPQRRPCSG*ASCRQH
Trigger: GTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCT...TCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTACTCGGGGAGAGACCTaGACTGTGGGTTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALTRGET*TVGFPA
Trigger: TGCTGGGAAACCCACAGTCCAGGTCTCTCCCCGAGT...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR TCA 90 bp CTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAGCTTCGATGTGTGTaGGGCTACCCGCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: LLALGTAGCIAHVIAWWAELRCV*GYPHSR
Trigger: GCGAGAATGCGGGTAGCCTCACACACATCGAAGCTC...TGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGACCTTGTGGCACTGGTaGCACACGGGAGTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: LLLALGTAGCIAHVIAWWTLWHW*HTGVLP
Trigger: CGGCAAGACTCCCGTGTGTCACCAGTGCCACAAGGT...CCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGAAGCCACCCTCTTACCTTGTGGCACTGGTaGCACACGGGAGTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: HSMVGRRWRPSPQRSHPLTLWHW*HTGVLP
Trigger: CGGCAAGACTCCCGTGTGTCACCAGTGCCACAAGGT...AAGAGGGTGGCTTCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp AATCTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGGGTAGCGGCCCCGGATaGCCTTGTGGCACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: NLLLALGTAGCIAHVIAWGSGPG*PCGTGD
Trigger: GTCACCAGTGCCACAAGGTCATCCGGGGCCGCTACC...CCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGCCCCAGCGTCGATCTTaGAGTCACAGCCATGGCATT +
Preference number: 4 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQPQRRS*SHSHGI
Trigger: AATGCCATGGCTGTGACTTCAAGATCGACGCTGGGG...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGCCTTCCAGGTTGATCTaGCATATCGCACAGACGAAG +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQPSRLI*HIAQTK
Trigger: CTTCGTCTGTGCGATATGTCAGATCAACCTGGAAGG...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AGCCCATTTATTACGCTGGTAAGGACCCGGAGGGCTCACTCGGGGAGAGACCTGCATTCTCGCCATCGATaGTCAGCACCCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: SPFITLVRTRRAHSGRDLHSRHR*SAPSHP
Trigger: TGGGTGACTGGGTGCTGAGCATCGATGGCGAGAATG...CAGGTCTCTCCCCGAGTGAGCCCTCCGGGTCCTTACCAGCGTAATAAATGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR GCA 90 bp GGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGGCACAGGTAAAGCAGTaGACGTGCCAGGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: GARVKATIASPTQKCRATAQVKQ*TCQVIF
Trigger: GAAGATGACCTGGCACGTGCACTGCTTTACCTGTGC...CGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGAGGACCTTCCCACACTaGCTACACACAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: GQEPGLRQPLPALPRNAGRTFPH*LHTNSS
Trigger: GGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCT...CCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGAGGACCTTCCCACACTaGCTACACACAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: GARVKATIASPTQKCRATRTFPH*LHTNSS
Trigger: GGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCT...CGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGCACGTCATAGCATGGTaGGCAGAAGATGGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQHVIAW*AEDGAL
Trigger: AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTG...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CTCTTCCAGGACCTTCCCACACTGGCTACACACAAACTCCTCCGGGTGGTACGCTGCACTTGGCACAGCTaGGTGCATAGCGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: LFQDLPTLATHKLLRVVRCTWHS*VHSARH
Trigger: ATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCA...GCGTACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCTGGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CTCGGGGAGAGACCTGGACTGTGGGTTTCCCAGCAGCCCTCGTTCCCACTGACATCTTCTTCTTGCACTTaGCACAGCTGGGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: LGERPGLWVSQQPSFPLTSSSCT*HSWVHS
Trigger: GCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGA...TGTCAGTGGGAACGAGGGCTGCTGGGAAACCCACAGTCCAGGTCTCTCCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CCA 90 bp CACTGTGCTCGTTTTGTCCGGGGCATAGCGCTCGGCAAACGCAGGGTCCACAGCTCTTCTTCTTGCACTTaGCACAGCTGGGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: HCARFVRGIALGKRRVHSSSSCT*HSWVHS
Trigger: GCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGA...GCTGTGGACCCTGCGTTTGCCGAGCGCTATGCCCCGGACAAAACGAGCACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CTCTTCCAGGACCTTCCCACACTGGCTACACACAAACTCCTCCGGGTGGTACGCTCTGTCCTGGGCACCTaGCTGCAAGATCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: LFQDLPTLATHKLLRVVRSVLGT*LQDLPF
Trigger: GAATGGCAGATCTTGCAGCCAGGTGCCCAGGACAGA...GCGTACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCTGGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR GCA 90 bp CTCCATGTAGAAGGCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGTAAACATTCTCGCCATCGATaGTCAGCACCCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: LHVEGPVPDGRLAGSTGKHSRHR*SAPSHP
Trigger: TGGGTGACTGGGTGCTGAGCATCGATGGCGAGAATG...TTTACCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp ACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCTTGGCACAGCTGGGTaGATAGCGCACGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: TWHSWVHSARHSMVGRRWLGTAG*IAHVIA
Trigger: TGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAG...CCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGGTCATCTTCAGGGCGTaGATGATCTCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: GQEPGLRQPLPALPRNAGVIFRA*MISPVI
Trigger: GATTACAGGCGAGATCATGCACGCCCTGAAGATGAC...CCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCACAGGTAAAGCAGTaGACGTGCCAGGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQAQVKQ*TCQVIF
Trigger: GAAGATGACCTGGCACGTGCACTGCTTTACCTGTGC...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGCAGCTGTGGGCAGAAGGGGCTCACACATGAGAGAAGGCATGGCTCTTGCAGAAGAAGGCATGGCTCTTaGAGAGAGGCCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSCGQKGLTHERRHGSCRRRHGS*REACPS
Trigger: AGAAGGACAGGCCTCTCTGCAAGAGCCATGCCTTCT...TCTGCAAGAGCCATGCCTTCTCTCATGTGTGAGCCCCTTCTGCCCACAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTAGAAGGCATGGCTCTTaGAGAGAGGCCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ARVKATIASPTQKCRATTRRHGS*REACPS
Trigger: AGAAGGACAGGCCTCTCTGCAAGAGCCATGCCTTCT...AGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGCATTTCGTGCCAAACATCTTCTCATAGTCTCGCTCGCAATAGGGCACGCCCTAGCCCTACCCAGAAATaGAGGGCCACGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GISCQTSSHSLARNRARPSPTQK*RATTPG
Trigger: GCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCT...AGGGCGTGCCCTATTGCGAGCGAGACTATGAGAAGATGTTTGGCACGAAATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp TCTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGAGCCCTACCCAGAAATaGAGGGCCACGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSSCTWHSWVHSARHSMVSPTQK*RATTPG
Trigger: GCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCT...CACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp CTCCATGTAGAAGGCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGTAAACTGGGGCTTCTGTCCTaGGCACCTGGCTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: LHVEGPVPDGRLAGSTGKLGLLS*APGLIS
Trigger: AGAAATCAAGCCAGGTGCCCAGGACAGAAGCCCCAG...TTTACCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGCCTTCTACATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493815.5
CDS-3UTR CCA 90 bp GAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGAATGGTGGGCAGAAGATaGCGCCCTTCTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: EPGLRQPLPALPRNAGPRMVGRR*RPSPQR
Trigger: TCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCAT...TCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR TCA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGCCTTCCAGGTTGATCTaGCATATCGCACAGACGAAG +
Preference number: 4 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQPSRLI*HIAQTK
Trigger: CTTCGTCTGTGCGATATGTCAGATCAACCTGGAAGG...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGTCATCTTCAGGGCGTaGATGATCTCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQVIFRA*MISPVI
Trigger: GATTACAGGCGAGATCATGCACGCCCTGAAGATGAC...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGCAGCTGTGGGCAGAAGGGGCTCACACATGAGAGAAGGCATGGCTCTTGCAGAGTCATCTTCAGGGCGTaGATGATCTCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: GSCGQKGLTHERRHGSCRVIFRA*MISPVI
Trigger: GATTACAGGCGAGATCATGCACGCCCTGAAGATGAC...TCTGCAAGAGCCATGCCTTCTCTCATGTGTGAGCCCCTTCTGCCCACAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAGCCATGGCATTTCGTaGCAAACATCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: PGSGQEPGLRQPLPALPRSHGIS*QTSSHS
Trigger: ACTATGAGAAGATGTTTGGCACGAAATGCCATGGCT...TCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GCGTGCATGATCTCGCCTGTAATCTTCTTCTTGCACTTGGCACAGCTGGGTGCATGGGGGCGTGGAAACTaGCGAGTTGGATTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ACMISPVIFFLHLAQLGAWGRGN*RVGFQV
Trigger: GACCTGGAATCCAACTCGGCAGTTTCCACGCCCCCA...TGCACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGGCGAGATCATGCACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR GCA 90 bp CATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGATGCCATTCAAGGCCCTaGATGGCTGAGCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: HSARHSMVGRRWRPSPQRCHSRP*MAELPD
Trigger: GTCAGGAAGCTCAGCCATGCAGGGCCTTGAATGGCA...TCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR CCA 90 bp GCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATAGGACCTTCCCACACTaGCTACACACAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALGTAGCIAHVIAWWAEDRTFPH*LHTNSS
Trigger: GGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCT...ATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp AGGCCAGTACAGCAGCCCATTTATTACGCTGGTAAGGACCCGGAGGGCTCACTCATGGTGGGCAGAAGATaGCGCCCTTCTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: RPVQQPIYYAGKDPEGSLMVGRR*RPSPQR
Trigger: TCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCAT...GAGTGAGCCCTCCGGGTCCTTACCAGCGTAATAAATGGGCTGCTGTACTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CCA 90 bp CAGCCAGCCCTACTCACGCCTGTAATCTTCTTCTTGCACTTGGCACAGCTGGGTCACGTCATAGCATGGTaGGCAGAAGATGGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: QPALLTPVIFFLHLAQLGHVIAW*AEDGAL
Trigger: AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTG...ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGGCGTGAGTAGGGCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CCA 90 bp CTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGTGCACTTGGCACAGCTaGGTGCATAGCGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: LLLALGTAGCIAHVIAWWCTWHS*VHSARH
Trigger: ATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCA...CCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp TTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCTCTTCTTCTTGCACTTaGCACAGCTGGGTGCATAGC +
Preference number: 4 (lower is better)
Translates to: LRQPLPALPRNAGPRLQASSSCT*HSWVHS
Trigger: GCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGA...GGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCAATGTCCAGTTAGCTaGTGTGCGGTCTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALQCPVS*CAVSSL
Trigger: CAAGCTAGAGACCGCACACCAGCTAACTGGACATTG...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR TCA 90 bp TGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCCTCAAAGTGCGGTCTCTAGCTTaGTTTCTTCAGGTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CIAHVIAWWAEDGALLLKVRSLA*FLQVLL
Trigger: GAGGAGCACCTGAAGAAATCAAGCTAGAGACCGCAC...TTTGAGGAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR GCA 90 bp CATCTTCTCATAGTCTCGCTCGCAATAGGGCACGCCCTCCTCCATGTAGAAGGCGCACAGGTAAAGCAGTaGACGTGCCAGGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: HLLIVSLAIGHALLHVEGAQVKQ*TCQVIF
Trigger: GAAGATGACCTGGCACGTGCACTGCTTTACCTGTGC...GCCTTCTACATGGAGGAGGGCGTGCCCTATTGCGAGCGAGACTATGAGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp CAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGAGCCATGGCATTTCGTaGCAAACATCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: QPLPALPRNAGPRLQAPQSHGIS*QTSSHS
Trigger: ACTATGAGAAGATGTTTGGCACGAAATGCCATGGCT...CTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp TGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCTTGAAGTCACAGCCATaGCATTTCGTGCCAAACATC +
Preference number: 4 (lower is better)
Translates to: WHSWVHSARHSMVGRRWRLKSQP*HFVPNI
Trigger: GATGTTTGGCACGAAATGCCATGGCTGTGACTTCAA...GCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp AATCTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGCTTGGCACAGCTGGGTaGATAGCGCACGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: NLLLALGTAGCIAHVIAWLGTAG*IAHVIA
Trigger: TGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAG...CCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGAGCCATGGCATTTCGTaGCAAACATCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: GPGARVKATIASPTQKCRSHGIS*QTSSHS
Trigger: ACTATGAGAAGATGTTTGGCACGAAATGCCATGGCT...CCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp GGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGTTGAAGTCACAGCCATaGCATTTCGTGCCAAACATC +
Preference number: 4 (lower is better)
Translates to: GLRQPLPALPRNAGPRLQLKSQP*HFVPNI
Trigger: GATGTTTGGCACGAAATGCCATGGCTGTGACTTCAA...CTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp AATCTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGATGGTGGGCAGAAGATaGCGCCCTTCTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: NLLLALGTAGCIAHVIAWMVGRR*RPSPQR
Trigger: TCTTTGAGGAGAAGGGCGCCATCTTCTGCCCACCAT...CCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CCA 90 bp ACCCTCTTCCAGGACCTTCCCACACTGGCTACACACAAACTCCTCCGGGTGGTATTGAAGTCACAGCCATaGCATTTCGTGCCAAACATC +
Preference number: 4 (lower is better)
Translates to: TLFQDLPTLATHKLLRVVLKSQP*HFVPNI
Trigger: GATGTTTGGCACGAAATGCCATGGCTGTGACTTCAA...TACCACCCGGAGGAGTTTGTGTGTAGCCAGTGTGGGAAGGTCCTGGAAGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR GCA 90 bp GGCATTTCGTGCCAAACATCTTCTCATAGTCTCGCTCGCAATAGGGCACGCCCTAGCCATGGCATTTCGTaGCAAACATCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: GISCQTSSHSLARNRARPSHGIS*QTSSHS
Trigger: ACTATGAGAAGATGTTTGGCACGAAATGCCATGGCT...AGGGCGTGCCCTATTGCGAGCGAGACTATGAGAAGATGTTTGGCACGAAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS CCA 90 bp CACAGCCGGGCAGGGCGGGCGGGCAGGGTAAGGTGGGGGCCTGGGTaGAAGTGGGGCGCCTGCAGCAGAGGACAGCGGCAGCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: HSRAGRAGRVRWGPG*KWGACSRGQRQLQP
Trigger: GGGCTGGAGCTGCCGCTGTCCTCTGCTGCAGGCGCCCCACTTCCACCCAGGCCCCCACCTTACCCTGCCCGCCCGCCCTGCCCGGCTGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS TCA 90 bp GGCCCATTTGGGAGTGGCGATCTCAGTCCACGCAGGACCGAGGGCTaGCCGAGTGCGGGCGAGCACGCAGCGCCGGCGGCGGGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: GPFGSGDLSPRRTEG*PSAGEHAAPAAGGS
Trigger: GCTGCCTCCCGCCGCCGGCGCTGCGTGCTCGCCCGCACTCGGTCAGCCCTCGGTCCTGCGTGGACTGAGATCGCCACTCCCAAATGGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS-3UTR CAA 90 bp TACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGCCGGCCTGCGCCGCTTaGCCCCCAGGAGTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: YPEMQGHDSRPLRLGATAPACAA*PPGVSR
Trigger: CCGGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGG...CGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp AGCCCCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCCGGCCTGCGCCGCTTaGCCCCCAGGAGTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: SPRLGPGARVKATIASPTPACAA*PPGVSR
Trigger: CCGGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGG...GGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS GCA 90 bp GCGGGAGGCAGCAGGCGGACAGACAGGCGGACAGACAGGCGGACATaGGTGGTGCCAGGACCGTGCAGCAGCCCCTGGCTCAACTCCAGG +
Preference number: 5 (lower is better)
Translates to: AGGSRRTDRRTDRRT*VVPGPCSSPWLNSR
Trigger: CCTGGAGTTGAGCCAGGGGCTGCTGCACGGTCCTGGCACCACGCATGTCCGCCTGTCTGTCCGCCTGTCTGTCCGCCTGCTGCCTCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS CCA 90 bp GAGGCAGCAGGCGGACAGACAGGCGGACAGACAGGCGGACATGCGTaGTGCCAGGACCGTGCAGCAGCCCCTGGCTCAACTCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: EAAGGQTGGQTGGHA*CQDRAAAPGSTPGP
Trigger: GGGCCCTGGAGTTGAGCCAGGGGCTGCTGCACGGTCCTGGCACCACGCATGTCCGCCTGTCTGTCCGCCTGTCTGTCCGCCTGCTGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS-3UTR CAA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCACCGGCCTGCGCCGCTTaGCCCCCAGGAGTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: QRGKAVSDEPRWAARARPPACAA*PPGVSR
Trigger: CCGGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGG...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CAA 90 bp GTGGTGGTGGAGGGAGTGGGGTGGGAGGATAAGGTGGGTGGGGCAGGGCCCAGGGGCCGGGCCGTCTTGTaGAGGGAGACGCTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: VVVEGVGWEDKVGGAGPRGRAVL*RETLGA
Trigger: TGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCC...CCTGGGCCCTGCCCCACCCACCTTATCCTCCCACCCCACTCCCTCCACCACCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp CGCGTGGCCCAGCGCCACCAGGTAGCGGCCCCGGATGACCTTGTGGCACTGGTGAAGGGCCGGGCCGTCTaGTTGAGGGAGACGCTGGGT +
Preference number: 5 (lower is better)
Translates to: RVAQRHQVAAPDDLVALVKGRAV*LRETLG
Trigger: ACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTT...CACCAGTGCCACAAGGTCATCCGGGGCCGCTACCTGGTGGCGCTGGGCCACGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS GCA 90 bp GTTTCTGCCCTCCACTCCCGGCCAGGGATTGGGGTACCGAGAATGTaGCAGGAGGGCGAGCAGGCCTGGCCGTCCAAGCCCACACCGCCC +
Preference number: 5 (lower is better)
Translates to: VSALHSRPGIGVPRM*QEGEQAWPSKPTPP
Trigger: GGGCGGTGTGGGCTTGGACGGCCAGGCCTGCTCGCCCTCCTGGCACATTCTCGGTACCCCAATCCCTGGCCGGGAGTGGAGGGCAGAAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS-3UTR CAA 90 bp AGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGGGGCGCGGCCGGGCCGTCTTGTaGAGGGAGACGCTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: SGRSGCLSGVCTHSAAGRGRAVL*RETLGA
Trigger: TGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCC...GCGCCCCGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR CAA 90 bp AATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTCTCCAGGGAGCCTCGTaGGGATCGGCCGCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: NAGPRLQAPQARGHRGSCLQGAS*GSAASV
Trigger: AACACTGGCGGCCGATCCCAACGAGGCTCCCTGGAG...ACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355841.7
ENST00000486828.6
CDS-3UTR CAA 90 bp GGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGTTCCGGATGGGCGTCTaGCAGGCAGCACAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: GPRLQAPQARGHRGSCGQFRMGV*QAAQVK
Trigger: CTTTACCTGTGCTGCCTGCAAGACGCCCATCCGGAA...CTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp GGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGCCGGCCTGCGCCGCTTaGCCCCCAGGAGTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: GPGARVKATIASPTQKCRPACAA*PPGVSR
Trigger: CCGGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGG...CCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp CGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGGTTCCGGATGGGCGTCTaGCAGGCAGCACAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: RLQAPQARGHRGSCGQKGFRMGV*QAAQVK
Trigger: CTTTACCTGTGCTGCCTGCAAGACGCCCATCCGGAA...CCCCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCCGGCCTGCGCCGCTTaGCCCCCAGGAGTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALPACAA*PPGVSR
Trigger: CCGGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGG...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGGGCCGGGCCGTCTTGTaGAGGGAGACGCTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQGRAVL*RETLGA
Trigger: TGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCC...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CAA 90 bp GGGACCAGCGGTCGGAGCGGCTGTTTGTCAGGGGTCTGCACCCATTCTGCTGCGAAGGGCCGGGCCGTCTaGTTGAGGGAGACGCTGGGT +
Preference number: 5 (lower is better)
Translates to: GTSGRSGCLSGVCTHSAAKGRAV*LRETLG
Trigger: ACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTT...CGCAGCAGAATGGGTGCAGACCCCTGACAAACAGCCGCTCCGACCGCTGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503827.5
CDS-3UTR CAA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGTTCCGGATGGGCGTCTaGCAGGCAGCACAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRFRMGV*QAAQVK
Trigger: CTTTACCTGTGCTGCCTGCAAGACGCCCATCCGGAA...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp ATTACGCTGGTAAGGACCCGGAGGGCTCACTCGGGGAGAGACCTGGACTGTGGGGGCCGGGCCGTCTTGTaGAGGGAGACGCTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: ITLVRTRRAHSGRDLDCGGRAVL*RETLGA
Trigger: TGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCC...CCCACAGTCCAGGTCTCTCCCCGAGTGAGCCCTCCGGGTCCTTACCAGCGTAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CAA 90 bp CAAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAAAGGGCCGGGCCGTCTaGTTGAGGGAGACGCTGGGT +
Preference number: 5 (lower is better)
Translates to: QRGKAVSDEPRWAARARPKGRAV*LRETLG
Trigger: ACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTT...TGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CAA 90 bp AAAGAGGGAAGGCAGTGTCAGATGAACCCAGGTGGGCGGCCAGGGCCAGGCCAGGGCTACGACTGCACGTaGAGCACGTGGGCAGAGCGC +
Preference number: 5 (lower is better)
Translates to: KEGRQCQMNPGGRPGPGQGYDCT*STWAER
Trigger: GCGCTCTGCCCACGTGCTCAACGTGCAGTCGTAGCC...CTGGCCTGGCCCTGGCCGCCCACCTGGGTTCATCTGACACTGCCTTCCCTCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS-3UTR CAA 90 bp CCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCTCCTGGGCACCTGGCTaGATTTCTTCAGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: PRNAGPRLQAPQARGHRGSWAPG*ISSGAP
Trigger: AGGAGCACCTGAAGAAATCAAGCCAGGTGCCCAGGA...GCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000493815.5
CDS GCA 90 bp TCGCCATCGATGCTCAGCACCCAGTCACCCACGGCCACTCCGGCCTaGGCCGCTTTGCCCCCAGGAGTGAGCTGTGGAGAGAGAAGCAAA +
Preference number: 5 (lower is better)
Translates to: SPSMLSTQSPTATPA*AALPPGVSCGERSK
Trigger: TTTGCTTCTCTCTCCACAGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGTGGGTGACTGGGTGCTGAGCATCGATGGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503346.1
CDS CCA 90 bp CTACGGGGAGAGGACGACTCAGGTTTCAAGGGGCCCATTTGGGAGTaGCGATCTCAGTCCACGCAGGACCGAGGGCTGACCGAGTGCGGG +
Preference number: 5 (lower is better)
Translates to: LRGEDDSGFKGPIWE*RSQSTQDRGLTECG
Trigger: CCCGCACTCGGTCAGCCCTCGGTCCTGCGTGGACTGAGATCGCCACTCCCAAATGGGCCCCTTGAAACCTGAGTCGTCCTCTCCCCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS-3UTR CAA 90 bp AATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTTCCTGGGCACCTGGCTaGATTTCTTCAGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: NAGPRLQAPQARGHRGSCSWAPG*ISSGAP
Trigger: AGGAGCACCTGAAGAAATCAAGCCAGGTGCCCAGGA...ACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000493815.5
CDS-3UTR CAA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGGGGTTAAGGCAACCATaGCCAGCCCTACCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRGLRQP*PALPRN
Trigger: ATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS TCA 90 bp CTGAGGCCCAGGCTGAGGCGCTCCCCGCAGGCCCGGATCTTGTTCTaGGCTTCGATGTGTGTGAGGCTACCCGCATTCTCGCCATCGATG +
Preference number: 5 (lower is better)
Translates to: LRPRLRRSPQARILF*ASMCVRLPAFSPSM
Trigger: CATCGATGGCGAGAATGCGGGTAGCCTCACACACATCGAAGCTCAGAACAAGATCCGGGCCTGCGGGGAGCGCCTCAGCCTGGGCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000355572.6
ENST00000355841.7
ENST00000359895.6
ENST00000393546.8
ENST00000393551.5
ENST00000463411.1
ENST00000486828.6
ENST00000493815.5
ENST00000503346.1
ENST00000503827.5
ENST00000505074.5
ENST00000506161.5
ENST00000506537.1
CDS CCA 90 bp TGGAGGCTACGGGGAGAGGACGACTCAGGTTTCAAGGGGCCCATTTaGGAGTGGCGATCTCAGTCCACGCAGGACCGAGGGCTGACCGAG +
Preference number: 5 (lower is better)
Translates to: WRLRGEDDSGFKGPI*EWRSQSTQDRGLTE
Trigger: CTCGGTCAGCCCTCGGTCCTGCGTGGACTGAGATCGCCACTCCCAAATGGGCCCCTTGAAACCTGAGTCGTCCTCTCCCCGTAGCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS CCA 90 bp CAGGCCCCTCCTGCCCTGCCCTGGGTCACGGGAACACAGGAGGGCTaGCCGCAAGCCCTGTTCCTTCTCGCGGTAAACACTACATCTAAC +
Preference number: 5 (lower is better)
Translates to: QAPPALPWVTGTQEG*PQALFLLAVNTTSN
Trigger: GTTAGATGTAGTGTTTACCGCGAGAAGGAACAGGGCTTGCGGCCAGCCCTCCTGTGTTCCCGTGACCCAGGGCAGGGCAGGAGGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504380.1
CDS CCA 90 bp AAGCAGTGCACGTGCCAGGTCATCTTCAGGGCGTGCATGATCTCCTaGAAGGAGGTCCCAGTCACTCGGCAGGCTCAGGCCCCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: KQCTCQVIFRACMIS*KEVPVTRQAQAPPA
Trigger: GGCAGGAGGGGCCTGAGCCTGCCGAGTGACTGGGACCTCCTTCCAGGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504380.1
CDS-3UTR CAA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTGGCCGGGCCGTCTTGTaGAGGGAGACGCTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALGRAVL*RETLGA
Trigger: TGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCC...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp GCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTCTCAAGGGCCGGGCCGTCTaGTTGAGGGAGACGCTGGGT +
Preference number: 5 (lower is better)
Translates to: AGCIAHVIAWWAEDGALLKGRAV*LRETLG
Trigger: ACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTT...GAGAAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp TGGGGCTTCTGTCCTGGGCACCTGGCTGCAAGATCTGCCATTCAAGGCCCTGCACTCCAGGGAGCCTCGTaGGGATCGGCCGCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: WGFCPGHLAARSAIQGPALQGAS*GSAASV
Trigger: AACACTGGCGGCCGATCCCAACGAGGCTCCCTGGAG...TGCAGGGCCTTGAATGGCAGATCTTGCAGCCAGGTGCCCAGGACAGAAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS-3UTR CAA 90 bp GGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGGAGTCTTGCCGTTGTaGCTGCCCCCTCCTGGCACC +
Preference number: 5 (lower is better)
Translates to: GPGARVKATIASPTQKCRGVLPL*LPPPGT
Trigger: GGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTCC...CCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp CACGACTCCAGGCCCCTCAGGCTAGGGGCCACCGCGGCAGCTGTGGGCAGAAGGCCTGTAATCTTCTTCTaGCACTTGGCACAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: HDSRPLRLGATAAAVGRRPVIFF*HLAQLG
Trigger: ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGG...CCTTCTGCCCACAGCTGCCGCGGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS TCA 90 bp GGCGCTCCCCGCAGGCCCGGATCTTGTTCTGAGCTTCGATGTGTGTaGGGCTACCCGCATTCTCGCCATCGATGCTCAGCACCCAGTCAC +
Preference number: 5 (lower is better)
Translates to: GAPRRPGSCSELRCV*GYPHSRHRCSAPSH
Trigger: GTGACTGGGTGCTGAGCATCGATGGCGAGAATGCGGGTAGCCTCACACACATCGAAGCTCAGAACAAGATCCGGGCCTGCGGGGAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000355572.6
ENST00000355841.7
ENST00000359895.6
ENST00000393546.8
ENST00000393551.5
ENST00000463411.1
ENST00000486828.6
ENST00000493815.5
ENST00000503346.1
ENST00000503827.5
ENST00000505074.5
ENST00000506161.5
ENST00000506537.1
CDS-3UTR CAA 90 bp TTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCAAGGGCCGGGCCGTCTaGTTGAGGGAGACGCTGGGT +
Preference number: 5 (lower is better)
Translates to: LRQPLPALPRNAGPRLQAKGRAV*LRETLG
Trigger: ACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTT...GGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp TTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCGGAGTCTTGCCGTTGTaGCTGCCCCCTCCTGGCACC +
Preference number: 5 (lower is better)
Translates to: LRQPLPALPRNAGPRLQAGVLPL*LPPPGT
Trigger: GGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTCC...GGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp GAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGAACGGGAGTCTTGCCGTaGTTGCTGCCCCCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: EPGLRQPLPALPRNAGPRTGVLP*LLPPPG
Trigger: GCCAGGAGGGGGCAGCAACAACGGCAAGACTCCCGT...TCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp ACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGCGCCCTTACGGGAGTCTTGCCGTaGTTGCTGCCCCCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: TAGCIAHVIAWWAEDGALTGVLP*LLPPPG
Trigger: GCCAGGAGGGGGCAGCAACAACGGCAAGACTCCCGT...AAGGGCGCCATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp CCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAGAGAAGGCATGGCTCTaGCAGAGAGGCCTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: PGSGQEPGLRQPLPALPREKAWL*QRGLSF
Trigger: GAAGGACAGGCCTCTCTGCAAGAGCCATGCCTTCTC...TCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp GCCCCACGGGAGATGACTGGGGGCGTGGAAACTGCCGAGTTGGATTCCAGGTCCGTGGAAACTGCCGAGTaGGATTCCAGGTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: APREMTGGVETAELDSRSVETAE*DSRSHW
Trigger: CCAGTGGGACCTGGAATCCAACTCGGCAGTTTCCAC...GGACCTGGAATCCAACTCGGCAGTTTCCACGCCCCCAGTCATCTCCCGTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS CCA 90 bp GAGCACGCCCAAGCCATAGGAGGCAGGTATTTTGTCAGGCTGGCCTaGGCTGCTGGCTGGCGGACCTCACTTTGGAAAGACAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: EHAQAIGGRYFVRLA*AAGWRTSLWKDRSS
Trigger: GCTGCTCCTGTCTTTCCAAAGTGAGGTCCGCCAGCCAGCAGCCCAGGCCAGCCTGACAAAATACCTGCCTCCTATGGCTTGGGCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506161.5
ENST00000506537.1
CDS-3UTR CAA 90 bp CATCTTCTCATAGTCTCGCTCGCAATAGGGCACGCCCTCCTCCATGTAGAAGGCGGCCGGGCCGTCTTGTaGAGGGAGACGCTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: HLLIVSLAIGHALLHVEGGRAVL*RETLGA
Trigger: TGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCC...GCCTTCTACATGGAGGAGGGCGTGCCCTATTGCGAGCGAGACTATGAGAAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp CCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTTCCTGGGCACCTGGCTaGATTTCTTCAGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: PLPALPRNAGPRLQAPQASWAPG*ISSGAP
Trigger: AGGAGCACCTGAAGAAATCAAGCCAGGTGCCCAGGA...AGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000493815.5
CDS-3UTR CAA 90 bp AGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGAGTCTTGCCGTTGTaGCTGCCCCCTCCTGGCACC +
Preference number: 5 (lower is better)
Translates to: RVKATIASPTQKCRATTPGVLPL*LPPPGT
Trigger: GGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTCC...TGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp CTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGGAGTCTTGCCGTTGTaGCTGCCCCCTCCTGGCACC +
Preference number: 5 (lower is better)
Translates to: LLALGTAGCIAHVIAWWAGVLPL*LPPPGT
Trigger: GGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTCC...TGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp TGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGAACGGGAGTCTTGCCGTaGTTGCTGCCCCCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: CTWHSWVHSARHSMVGRRTGVLP*LLPPPG
Trigger: GCCAGGAGGGGGCAGCAACAACGGCAAGACTCCCGT...TCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp CCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTAGGGGCCACCTGTGCGGTCTCTAGCTaGATTTCTTCAGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: PYPEMQGHDSRPLRLGATCAVSS*ISSGAP
Trigger: AGGAGCACCTGAAGAAATCAAGCTAGAGACCGCACA...GGTGGCCCCTAGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486828.6
CDS GCA 90 bp GCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGTAAAGCAGTaGACGTGCCAGGTCATCTTCAGGGCGTGCATGATCTCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: ALFRMGVLQAAQVKQ*TCQVIFRACMISLP
Trigger: AGGCAAGGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTTTACCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505746.1
CDS GCA 90 bp GCCCTGTTCCGGATGGGCGTCTTGCAGGCAGCACAGGTAAAGCAGTaGACGTGCCAGGTCATCTTCAGGGCGTGCATGATCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: ALFRMGVLQAAQVKQ*TCQVIFRACMISWK
Trigger: CTTCCAGGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTTTACCTGTGCTGCCTGCAAGACGCCCATCCGGAACAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504380.1
CDS-3UTR CAA 90 bp CAGCCAGCCCTACTCACGCCTGTAATCTTCTTCTTGCACTTGGCACAGCTGGGTAAGGGCCGGGCCGTCTaGTTGAGGGAGACGCTGGGT +
Preference number: 5 (lower is better)
Translates to: QPALLTPVIFFLHLAQLGKGRAV*LRETLG
Trigger: ACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTT...ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGGCGTGAGTAGGGCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CAA 90 bp GGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGAGAAGGCATGGCTCTaGCAGAGAGGCCTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GPGARVKATIASPTQKCREKAWL*QRGLSF
Trigger: GAAGGACAGGCCTCTCTGCAAGAGCCATGCCTTCTC...CCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp CCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGACTCCAGGCCCCTCAGGCTGGGTTAAGGCAACCATaGCCAGCCCTACCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: PLPALPRNAGPRLQAPQAGLRQP*PALPRN
Trigger: ATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC...AGCCTGAGGGGCCTGGAGTCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp TCTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGACGGGAGTCTTGCCGTaGTTGCTGCCCCCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SSSCTWHSWVHSARHSMVTGVLP*LLPPPG
Trigger: GCCAGGAGGGGGCAGCAACAACGGCAAGACTCCCGT...CACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp CCAGGCTCGGGCCAGGAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGACCTGTAATCTTCTTCTaGCACTTGGCACAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: PGSGQEPGLRQPLPALPRPVIFF*HLAQLG
Trigger: ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGG...TCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTCCTGGCCCGAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp GGCAGAAGGGGCTCACACATGAGAGAAGGCATGGCTCTTGCAGAGAGGCCTGTCTTCCGGATGGGCGTCTaGCAGGCAGCACAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: GRRGSHMREGMALAERPVFRMGV*QAAQVK
Trigger: CTTTACCTGTGCTGCCTGCAAGACGCCCATCCGGAA...GACAGGCCTCTCTGCAAGAGCCATGCCTTCTCTCATGTGTGAGCCCCTTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp GAGCCAGGGTTAAGGCAACCATTGCCAGCCCTACCCAGAAATGCAGGGCCACGAGAGAAGGCATGGCTCTaGCAGAGAGGCCTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: EPGLRQPLPALPRNAGPREKAWL*QRGLSF
Trigger: GAAGGACAGGCCTCTCTGCAAGAGCCATGCCTTCTC...TCGTGGCCCTGCATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355841.7
ENST00000359895.6
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp GGCAGCTGTGGGCAGAAGGGGCTCACACATGAGAGAAGGCATGGCTCTTGCAGAGAGAAGGCATGGCTCTaGCAGAGAGGCCTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GSCGQKGLTHERRHGSCREKAWL*QRGLSF
Trigger: GAAGGACAGGCCTCTCTGCAAGAGCCATGCCTTCTC...TCTGCAAGAGCCATGCCTTCTCTCATGTGTGAGCCCCTTCTGCCCACAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS TCA 90 bp ACGACCACTGCGCCTTCAGACTTGCCATGTCCAGCACTCAGTTCCTaGTTCCCTCACCCCAAACCTCTCCTCCCACAGCCATCCCCATCA +
Preference number: 5 (lower is better)
Translates to: TTTAPSDLPCPALSS*FPHPKPLLPQPSPS
Trigger: TGATGGGGATGGCTGTGGGAGGAGAGGTTTGGGGTGAGGGAATCAGGAACTGAGTGCTGGACATGGCAAGTCTGAAGGCGCAGTGGTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504380.1
CDS-3UTR CAA 90 bp AATCTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGGGAGTCTTGCCGTTGTaGCTGCCCCCTCCTGGCACC +
Preference number: 5 (lower is better)
Translates to: NLLLALGTAGCIAHVIAWGVLPL*LPPPGT
Trigger: GGTGCCAGGAGGGGGCAGCAACAACGGCAAGACTCC...CCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp CAGCCAGCCCTACTCACGCCTGTAATCTTCTTCTTGCACTTGGCACAGCTGGGTGGGGGCGGTAGGGCCTaGATTTCTTCAGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: QPALLTPVIFFLHLAQLGGGGRA*ISSGAP
Trigger: AGGAGCACCTGAAGAAATCAAGGCCCTACCGCCCCC...ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGGCGTGAGTAGGGCTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CAA 90 bp AATCTTCTTCTTGCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTTCCCACTGACAGGCTaGGGACCACCTCCCCGCCAG +
Preference number: 5 (lower is better)
Translates to: NLLLALGTAGCIAHVIAWFPLTG*GPPPRQ
Trigger: CTGGCGGGGAGGTGGTCCCAAGCCTGTCAGTGGGAA...CCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS GCA 90 bp GCAGCACAGGTAAAGCAGTGCACGTGCCAGGTCATCTTCAGGGCGTaGATGATCTCCTTGCCTCTGCACACTGGCCTCTTGCCTGAAACT +
Preference number: 5 (lower is better)
Translates to: AAQVKQCTCQVIFRA*MISLPLHTGLLPET
Trigger: AGTTTCAGGCAAGAGGCCAGTGTGCAGAGGCAAGGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTTTACCTGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505746.1
CDS GCA 90 bp CCAACTCCAAGGTCTCTGAGTGGACGACCACTGCGCCTTCAGACTTaGCATGTCCAGCACTCAGTTCCTGATTCCCTCACCCCAAACCTC +
Preference number: 5 (lower is better)
Translates to: PTPRSLSGRPLRLQT*HVQHSVPDSLTPNL
Trigger: GAGGTTTGGGGTGAGGGAATCAGGAACTGAGTGCTGGACATGGCAAGTCTGAAGGCGCAGTGGTCGTCCACTCAGAGACCTTGGAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504380.1
CDS-3UTR CAA 90 bp GGCAGCTGTGGGCAGAAGGGGCTCACACATGAGAGAAGGCATGGCTCTTGCAGAGGGTTAAGGCAACCATaGCCAGCCCTACCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: GSCGQKGLTHERRHGSCRGLRQP*PALPRN
Trigger: ATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC...TCTGCAAGAGCCATGCCTTCTCTCATGTGTGAGCCCCTTCTGCCCACAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp GCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATGGGTTAAGGCAACCATaGCCAGCCCTACCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: ALGTAGCIAHVIAWWAEDGLRQP*PALPRN
Trigger: ATTTCTGGGTAGGGCTGGCAATGGTTGCCTTAACCC...ATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS-3UTR CAA 90 bp ACCACCTCCCCGCCAGCCAGCCCTACTCACGCCTGTAATCTTCTTCTTGCACTTCCTGTAATCTTCTTCTaGCACTTGGCACAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: TTSPPASPTHACNLLLALPVIFF*HLAQLG
Trigger: ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGG...AAGTGCAAGAAGAAGATTACAGGCGTGAGTAGGGCTGGCTGGCGGGGAGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393551.5
CDS-3UTR CAA 90 bp GCACTTGGCACAGCTGGGTGCATAGCGCACGTCATAGCATGGTGGGCAGAAGATCCTGTAATCTTCTTCTaGCACTTGGCACAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ALGTAGCIAHVIAWWAEDPVIFF*HLAQLG
Trigger: ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGG...ATCTTCTGCCCACCATGCTATGACGTGCGCTATGCACCCAGCTGTGCCAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393551.5
ENST00000486828.6
ENST00000493815.5
CDS GCA 90 bp TTCCAGAACCCAGAGAGCTCTTCATTCAACATAGTTCTAGGCAGCTaGTGGACACTAAAGCAACCCAGGAGGTGGTGGCGCTCACCTGAG +
Preference number: 5 (lower is better)
Translates to: FQNPESSSFNIVLGS*WTLKQPRRWWRSPE
Trigger: CTCAGGTGAGCGCCACCACCTCCTGGGTTGCTTTAGTGTCCAGCAGCTGCCTAGAACTATGTTGAATGAAGAGCTCTCTGGGTTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503346.1
CDS CCA 90 bp CAGAACCCAGAGAGCTCTTCATTCAACATAGTTCTAGGCAGCTGCTaGACACTAAAGCAACCCAGGAGGTGGTGGCGCTCACCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: QNPESSSFNIVLGSC*TLKQPRRWWRSPEL
Trigger: AAGCTCAGGTGAGCGCCACCACCTCCTGGGTTGCTTTAGTGTCCAGCAGCTGCCTAGAACTATGTTGAATGAAGAGCTCTCTGGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503346.1
CDS CCA 90 bp AACATAGTTCTAGGCAGCTGCTGGACACTAAAGCAACCCAGGAGGTaGTGGCGCTCACCTGAGCTTCACAATTTCCCAGTCACACTGCTT +
Preference number: 5 (lower is better)
Translates to: NIVLGSCWTLKQPRR*WRSPELHNFPVTLL
Trigger: AAGCAGTGTGACTGGGAAATTGTGAAGCTCAGGTGAGCGCCACCACCTCCTGGGTTGCTTTAGTGTCCAGCAGCTGCCTAGAACTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503346.1
CDS-3UTR CAA 90 bp GGCATTTCGTGCCAAACATCTTCTCATAGTCTCGCTCGCAATAGGGCACGCCCTCCTGTAATCTTCTTCTaGCACTTGGCACAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: GISCQTSSHSLARNRARPPVIFF*HLAQLG
Trigger: ACCCAGCTGTGCCAAGTGCAAGAAGAAGATTACAGG...AGGGCGTGCCCTATTGCGAGCGAGACTATGAGAAGATGTTTGGCACGAAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486828.6
ENST00000493815.5
CDS CCA 90 bp ATAGTTCTAGGCAGCTGCTGGACACTAAAGCAACCCAGGAGGTGGTaGCGCTCACCTGAGCTTCACAATTTCCCAGTCACACTGCTTATT +
Preference number: 5 (lower is better)
Translates to: IVLGSCWTLKQPRRW*RSPELHNFPVTLLI
Trigger: AATAAGCAGTGTGACTGGGAAATTGTGAAGCTCAGGTGAGCGCCACCACCTCCTGGGTTGCTTTAGTGTCCAGCAGCTGCCTAGAACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503346.1
CDS TCA 72 bp GGGAGTGGCGATCTCAGTCCACGCAGGACCGAGGGCTaGCCGAGTGCGGGCGAGCACGCAGCGCCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: GSGDLSPRRTEG*PSAGEHAAPAA
Trigger: CGCCGCCGGCGCTGCGTGCTCGCCCGCACTCGGTCAGCCCTCGGTCCTGCGTGGACTGAGATCGCCACTCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS GCA 72 bp AAAGGGCCGGGCCGTCTTGTTGAGGGAGACGCTGGGTaGAAAGGTGTACCGCGGAGGGTCCGCGGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: KGPGRLVEGDAG*KGVPRRVRGGG
Trigger: GCCCCCGCCGCGGACCCTCCGCGGTACACCTTTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000355572.6
ENST00000355841.7
ENST00000393546.8
ENST00000393551.5
ENST00000463411.1
ENST00000486828.6
ENST00000493815.5
ENST00000503346.1
ENST00000503827.5
ENST00000504318.5
ENST00000505074.5
ENST00000506161.5
CDS CCA 72 bp TGGAGAGGGCCGGGCTACGACTGCACGTTGAGCACGTaGGCAGAGCGCTGGTGGTGCCAGTCCCGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: WRGPGYDCTLST*AERWWCQSRRR
Trigger: CCGCCTCCGGGACTGGCACCACCAGCGCTCTGCCCACGTGCTCAACGTGCAGTCGTAGCCCGGCCCTCTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355572.6
CDS CAA 72 bp TCAGCGGGCGGGGGCGCCCCAAAGGGCCGGGCCGTCTaGTTGAGGGAGACGCTGGGTGCAAAGGTGTACCGC +
Preference number: 6 (lower is better)
Translates to: SAGGGAPKGRAV*LRETLGAKVYR
Trigger: GCGGTACACCTTTGCACCCAGCGTCTCCCTCAACAAGACGGCCCGGCCCTTTGGGGCGCCCCCGCCCGCTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000355572.6
ENST00000355841.7
ENST00000393546.8
ENST00000393551.5
ENST00000463411.1
ENST00000486828.6
ENST00000493815.5
ENST00000503346.1
ENST00000503827.5
ENST00000504318.5
ENST00000505074.5
ENST00000506161.5
CDS GCA 72 bp AGCAGGCGGACAGACAGGCGGACAGACAGGCGGACATaGGTGGTGCCAGGACCGTGCAGCAGCCCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SRRTDRRTDRRT*VVPGPCSSPWL
Trigger: GAGCCAGGGGCTGCTGCACGGTCCTGGCACCACGCATGTCCGCCTGTCTGTCCGCCTGTCTGTCCGCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS GCA 72 bp CGGACAGACAGGCGGACATGCGTGGTGCCAGGACCGTaGAGCAGCCCCTGGCTCAACTCCAGGGCCCTAGAC +
Preference number: 6 (lower is better)
Translates to: RTDRRTCVVPGP*SSPWLNSRALD
Trigger: GTCTAGGGCCCTGGAGTTGAGCCAGGGGCTGCTGCACGGTCCTGGCACCACGCATGTCCGCCTGTCTGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS GCA 72 bp ATGCTCAGCACCCAGTCACCCACGGCCACTCCGGCCTaGGCCGCTTTGCCCCCAGGAGTGAGCTGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: MLSTQSPTATPA*AALPPGVSCGE
Trigger: CTCTCCACAGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGTGGGTGACTGGGTGCTGAGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503346.1
CDS GCA 72 bp GGACAGACAGGCGGACAGACAGGCGGACATGCGTGGTaGCAGGACCGTGCAGCAGCCCCTGGCTCAACTCCA +
Preference number: 6 (lower is better)
Translates to: GQTGGQTGGHAW*QDRAAAPGSTP
Trigger: TGGAGTTGAGCCAGGGGCTGCTGCACGGTCCTGGCACCACGCATGTCCGCCTGTCTGTCCGCCTGTCTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS CAA 90 bp ATGCTCAGCACCCAGTCACCCACGGCCACTCCGGCCTGCGCCGCTTaGCCCCCAGGAGTGAGCTGTGGAGAGAGAAGCAAAGTGACCGAG +
Preference number: 6 (lower is better)
Translates to: MLSTQSPTATPACAA*PPGVSCGERSKVTE
Trigger: CTCGGTCACTTTGCTTCTCTCTCCACAGCTCACTCCTGGGGGCAAAGCGGCGCAGGCCGGAGTGGCCGTGGGTGACTGGGTGCTGAGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503346.1
CDS CCA 72 bp CGGGGAGAGGACGACTCAGGTTTCAAGGGGCCCATTTaGGAGTGGCGATCTCAGTCCACGCAGGACCGAGGG +
Preference number: 6 (lower is better)
Translates to: RGEDDSGFKGPI*EWRSQSTQDRG
Trigger: CCCTCGGTCCTGCGTGGACTGAGATCGCCACTCCCAAATGGGCCCCTTGAAACCTGAGTCGTCCTCTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS CAA 90 bp TTGGAGGCTACGGGGAGAGGACGACTCAGGTTTCAAGGGGCCCATTaGGGAGTGGCGATCTCAGTCCACGCAGGACCGAGGGCTGACCGA +
Preference number: 6 (lower is better)
Translates to: LEATGRGRLRFQGAH*GVAISVHAGPRADR
Trigger: TCGGTCAGCCCTCGGTCCTGCGTGGACTGAGATCGCCACTCCCAAATGGGCCCCTTGAAACCTGAGTCGTCCTCTCCCCGTAGCCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463411.1
CDS TCA 72 bp AGGCTGAGGCGCTCCCCGCAGGCCCGGATCTTGTTCTaGGCTTCGATGTGTGTGAGGCTACCCGCATTCTCG +
Preference number: 6 (lower is better)
Translates to: RLRRSPQARILF*ASMCVRLPAFS
Trigger: CGAGAATGCGGGTAGCCTCACACACATCGAAGCTCAGAACAAGATCCGGGCCTGCGGGGAGCGCCTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000355572.6
ENST00000355841.7
ENST00000359895.6
ENST00000393546.8
ENST00000393551.5
ENST00000463411.1
ENST00000486828.6
ENST00000493815.5
ENST00000503346.1
ENST00000503827.5
ENST00000505074.5
ENST00000506161.5
ENST00000506537.1
CDS CCA 72 bp GGCAGGTATTTTGTCAGGCTGGCCTGGGCTGCTGGCTaGCGGACCTCACTTTGGAAAGACAGGAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: GRYFVRLAWAAG*RTSLWKDRSSP
Trigger: GGGGCTGCTCCTGTCTTTCCAAAGTGAGGTCCGCCAGCCAGCAGCCCAGGCCAGCCTGACAAAATACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506161.5
ENST00000506537.1
CDS CAA 72 bp TGGGACTGGAACGGTGAGGGGTGCCTGAATCCAGGCTaGAGGTTCTTTGCAACCAGGGGTGGGCCGAGGGAC +
Preference number: 6 (lower is better)
Translates to: WDWNGEGCLNPG*RFFATRGGPRD
Trigger: GTCCCTCGGCCCACCCCTGGTTGCAAAGAACCTCAAGCCTGGATTCAGGCACCCCTCACCGTTCCAGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506161.5
ENST00000506537.1
CDS TCA 72 bp AGCAGTGCACGTGCCAGGTCATCTTCAGGGCGTGCATaGTCTCCTGGAAGGAGGTCCCAGTCACTCGGCAGG +
Preference number: 6 (lower is better)
Translates to: SSARARSSSGRA*SPGRRSQSLGR
Trigger: CCTGCCGAGTGACTGGGACCTCCTTCCAGGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504380.1
CDS GCA 72 bp GGCGTCTTGCAGGCAGCACAGGTAAAGCAGTGCACGTaGCAGGTCATCTTCAGGGCGTGCATGATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GVLQAAQVKQCT*QVIFRACMISW
Trigger: CCAGGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTTTACCTGTGCTGCCTGCAAGACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504380.1
CDS CAA 72 bp GCGTGCATGATCTCCTTGCCTCTGCACACTGGCCTCTaGCCTGAAACTGGCACACCAGGCACACTCCTGTCC +
Preference number: 6 (lower is better)
Translates to: ACMISLPLHTGL*PETGTPGTLLS
Trigger: GGACAGGAGTGTGCCTGGTGTGCCAGTTTCAGGCAAGAGGCCAGTGTGCAGAGGCAAGGAGATCATGCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505746.1
CDS CAA 90 bp AAGCAGTGCACGTGCCAGGTCATCTTCAGGGCGTGCATGATCTCCTaGCCTCTGCACACTGGCCTCTTGCCTGAAACTGGCACACCAGGC +
Preference number: 6 (lower is better)
Translates to: KQCTCQVIFRACMIS*PLHTGLLPETGTPG
Trigger: GCCTGGTGTGCCAGTTTCAGGCAAGAGGCCAGTGTGCAGAGGCAAGGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505746.1
CDS TCA 72 bp CGCAGGCCCGGATCTTGTTCTGAGCTTCGATGTGTGTaGGGCTACCCGCATTCTCGCCATCGATGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: RRPGSCSELRCV*GYPHSRHRCSA
Trigger: TGCTGAGCATCGATGGCGAGAATGCGGGTAGCCTCACACACATCGAAGCTCAGAACAAGATCCGGGCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000355572.6
ENST00000355841.7
ENST00000359895.6
ENST00000393546.8
ENST00000393551.5
ENST00000463411.1
ENST00000486828.6
ENST00000493815.5
ENST00000503346.1
ENST00000503827.5
ENST00000505074.5
ENST00000506161.5
ENST00000506537.1
CDS TCA 72 bp GCGCCTTCAGACTTGCCATGTCCAGCACTCAGTTCCTaGTTCCCTCACCCCAAACCTCTCCTCCCACAGCCA +
Preference number: 6 (lower is better)
Translates to: APSDLPCPALSS*FPHPKPLLPQP
Trigger: TGGCTGTGGGAGGAGAGGTTTGGGGTGAGGGAATCAGGAACTGAGTGCTGGACATGGCAAGTCTGAAGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504380.1
CDS GCA 72 bp GGCGTCTTGCAGGCAGCACAGGTAAAGCAGTGCACGTaGCAGGTCATCTTCAGGGCGTGCATGATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: GVLQAAQVKQCT*QVIFRACMISL
Trigger: CAAGGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTTTACCTGTGCTGCCTGCAAGACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505746.1
CDS TCA 72 bp TCACTGCCAGACCCTCTCCCTCAGGTGGTGCTCACCTaGGCTTCCCCAGTCACGATGCTTATCTATTCACCG +
Preference number: 6 (lower is better)
Translates to: SLPDPLPQVVLT*ASPVTMLIYSP
Trigger: CGGTGAATAGATAAGCATCGTGACTGGGGAAGCTCAGGTGAGCACCACCTGAGGGAGAGGGTCTGGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503346.1
CDS GCA 72 bp GTAAAGCAGTGCACGTGCCAGGTCATCTTCAGGGCGTaGATGATCTCCTTGCCTCTGCACACTGGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: VKQCTCQVIFRA*MISLPLHTGLL
Trigger: CAAGAGGCCAGTGTGCAGAGGCAAGGAGATCATGCACGCCCTGAAGATGACCTGGCACGTGCACTGCTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505746.1
CDS CCA 72 bp GGCAGCTGCTGGACACTAAAGCAACCCAGGAGGTGGTaGCGCTCACCTGAGCTTCACAATTTCCCAGTCACA +
Preference number: 6 (lower is better)
Translates to: GSCWTLKQPRRW*RSPELHNFPVT
Trigger: TGTGACTGGGAAATTGTGAAGCTCAGGTGAGCGCCACCACCTCCTGGGTTGCTTTAGTGTCCAGCAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503346.1
CDS CCA 72 bp CTAGGCAGCTGCTGGACACTAAAGCAACCCAGGAGGTaGTGGCGCTCACCTGAGCTTCACAATTTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: LGSCWTLKQPRR*WRSPELHNFPV
Trigger: GACTGGGAAATTGTGAAGCTCAGGTGAGCGCCACCACCTCCTGGGTTGCTTTAGTGTCCAGCAGCTGCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503346.1
CDS GCA 72 bp CCAGAGAGCTCTTCATTCAACATAGTTCTAGGCAGCTaGTGGACACTAAAGCAACCCAGGAGGTGGTGGCGC +
Preference number: 6 (lower is better)
Translates to: PESSSFNIVLGS*WTLKQPRRWWR
Trigger: GCGCCACCACCTCCTGGGTTGCTTTAGTGTCCAGCAGCTGCCTAGAACTATGTTGAATGAAGAGCTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503346.1