RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDLIM4 (Homo sapiens)

Ensembl gene IDs: ENSG00000131435

Ensembl transcript IDs: ENST00000253754.8, ENST00000379018.7, ENST00000418373.1, ENST00000462597.1, ENST00000463615.1, ENST00000474421.1, ENST00000484620.1

Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTaGGGTACACCGCCACCACGTCGTAGCCCTCGGGCGGCTTCACGC +
Preference number: 1 (lower is better)
Translates to: GVGAGSQLRRVPPWH*GTPPPRRSPRAASR
Trigger: GCGTGAAGCCGCCCGAGGGCTACGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
3UTR CCA 90 bp GAAGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTaGCATTGGGGTACACCGCCACCACGTCGTAGCCCTCGGGCGGCT +
Preference number: 1 (lower is better)
Translates to: EAGVGAGSQLRRVPP*HWGTPPPRRSPRAA
Trigger: AGCCGCCCGAGGGCTACGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
3UTR GCA 90 bp TCCACCCAGGCTGTGGCCCCCTTCAGGGCAGCATGGTACCCGTCCTaGTCACTACTGCACCCAGAGCCTAGGACATGCCTGGCACCTAAG +
Preference number: 1 (lower is better)
Translates to: STQAVAPFRAAWYPS*SLLHPEPRTCLAPK
Trigger: CTTAGGTGCCAGGCATGTCCTAGGCTCTGGGTGCAGTAGTGAGCAGGACGGGTACCATGCTGCCCTGAAGGGGGCCACAGCCTGGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR CCA 90 bp TCAGGTCTGCCTTCCACCCAGGCTGTGGCCCCCTTCAGGGCAGCATaGTACCCGTCCTGCTCACTACTGCACCCAGAGCCTAGGACATGC +
Preference number: 1 (lower is better)
Translates to: SGLPSTQAVAPFRAA*YPSCSLLHPEPRTC
Trigger: GCATGTCCTAGGCTCTGGGTGCAGTAGTGAGCAGGACGGGTACCATGCTGCCCTGAAGGGGGCCACAGCCTGGGTGGAAGGCAGACCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR TCA 90 bp CAGCATCCCAGACCTCACCTTCGTATTACTAGAGCTGGCCCGTTGTaGTTCAGGTCTGCCTTCCACCCAGGCTGTGGCCCCCTTCAGGGC +
Preference number: 1 (lower is better)
Translates to: QHPRPHLRITRAGPL*FRSAFHPGCGPLQG
Trigger: GCCCTGAAGGGGGCCACAGCCTGGGTGGAAGGCAGACCTGAATCACAACGGGCCAGCTCTAGTAATACGAAGGTGAGGTCTGGGATGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR TCA 90 bp AGGGTAGATCCACGCGACCCGGAGTCTAGGACACATCCTCGGGAGTaGACAGCCACAATTCACAGACGATGTGTGCAGCCGGGGCATGAA +
Preference number: 1 (lower is better)
Translates to: RVDPRDPESRTHPRE*TATIHRRCVQPGHE
Trigger: TTCATGCCCCGGCTGCACACATCGTCTGTGAATTGTGGCTGTTCACTCCCGAGGATGTGTCCTAGACTCCGGGTCGCGTGGATCTACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR GCA 90 bp GCATGGTACCCGTCCTGCTCACTACTGCACCCAGAGCCTAGGACATaGCTGGCACCTAAGCAGATACTACTGTACTCGGGAGCCATGCAT +
Preference number: 1 (lower is better)
Translates to: AWYPSCSLLHPEPRT*LAPKQILLYSGAMH
Trigger: ATGCATGGCTCCCGAGTACAGTAGTATCTGCTTAGGTGCCAGGCATGTCCTAGGCTCTGGGTGCAGTAGTGAGCAGGACGGGTACCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR GCA 90 bp GGACACATCCTCGGGAGTGAACAGCCACAATTCACAGACGATGTGTaGAGCCGGGGCATGAAAGGCCCAAGGCAAACACACCACGAGGTA +
Preference number: 1 (lower is better)
Translates to: GHILGSEQPQFTDDV*SRGMKGPRQTHHEV
Trigger: TACCTCGTGGTGTGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCTGTGAATTGTGGCTGTTCACTCCCGAGGATGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR CCA 90 bp CCACGAGGTAAACGCCGGGACTCTGAGGAGAGGGGTGGAAGCCGGGACTTCGAGTTTAAGCGCGCCCCCTaGTGGGGGAGAGAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: PRGKRRDSEERGGSRDFEFKRAP*WGREEG
Trigger: CCCTTCCTCTCTCCCCCACCAGGGGGCGCGCTTAAA...CTCGAAGTCCCGGCTTCCACCCCTCTCCTCAGAGTCCCGGCGTTTACCTCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR GCA 90 bp AACGCCGGGACTCTGAGGAGAGGGGTGGAAGCCGGGACTTCGAGGAGGGGTGGACACACAGTTCCCCCGTaGAGAGTTTGTGCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: NAGTLRRGVEAGTSRRGGHTVPP*RVCASL
Trigger: GAGGGAGGCACAAACTCTGCACGGGGGAACTGTGTG...TCCACCCCTCCTCGAAGTCCCGGCTTCCACCCCTCTCCTCAGAGTCCCGGCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR TCA 90 bp AGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGAGGGCAAAGCTGGGAGCGATCGCTCCTaGGGCTGCCAGCACCCCACC +
Preference number: 2 (lower is better)
Translates to: RRGGIDLETGGSLLEGKAGSDRS*GCQHPT
Trigger: GGTGGGGTGCTGGCAGCCTCAGGAGCGATCGCTCCC...AGCTTTGCCCTCCAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR CCA 90 bp GCAGGGACCTTAAGAAGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCGCTTCACGCGCGCCTTaGCGTGGCTCTCACAGTAGA +
Preference number: 2 (lower is better)
Translates to: AGTLRSRRGSRVPAQTSSASRAP*RGSHSR
Trigger: TCTACTGTGAGAGCCACGCCAAGGCGCGCGTGAAGC...GGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCTTCTTAAGGTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
3UTR-3UTR TCA 90 bp ACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTATTACTAGGGTGGCAGGCCAGGTaGCAGGTTCAAGGTGGAGCA +
Preference number: 2 (lower is better)
Translates to: TSCRRAARSIPDLTFVLLGWQAR*QVQGGA
Trigger: TGCTCCACCTTGAACCTGTCACCTGGCCTGCCACCC...TAGTAATACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR TCA 90 bp AGGTCATACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTAGAGCTGGCCCGTTGTaGTTCAGGTCTGCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: RSYLLSSRRTQHPRPHLRRAGPL*FRSAFH
Trigger: GTGGAAGGCAGACCTGAATCACAACGGGCCAGCTCT...ACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGTATGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR GCA 90 bp ACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGAGGGCCCCCCAGCTCACCTTTaGACACACAGTTCCCCCGTG +
Preference number: 2 (lower is better)
Translates to: TSRRGGIDLETGGSLLEGPPAHL*THSSPV
Trigger: CACGGGGGAACTGTGTGTGCAAAGGTGAGCTGGGGG...GCCCTCCAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR GCA 90 bp CCACGAGGTAAACGCCGGGACTCTGAGGAGAGGGGTGGAAGCCGGGACTTCGAGCGGAGGAGAATAAAGTaGTCGTGGGTGGAAGAAACC +
Preference number: 2 (lower is better)
Translates to: PRGKRRDSEERGGSRDFERRRIK*SWVEET
Trigger: GGTTTCTTCCACCCACGAGCACTTTATTCTCCTCCG...CTCGAAGTCCCGGCTTCCACCCCTCTCCTCAGAGTCCCGGCGTTTACCTCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR TCA 90 bp AGACGATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACACACCACGAGGTGAGGAGGGGTGGAATTaGCTTAGAGACAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: RRCVQPGHERPKANTPRGEEGWN*LRDRRE
Trigger: CTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTC...ACCTCGTGGTGTGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR GCA 90 bp CCACAATTCACAGACGATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACAGTTGTGATTCAGGTCTaGCTTCCACCCAGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: PQFTDDVCSRGMKGPRQTVVIQV*LPPRLW
Trigger: CCACAGCCTGGGTGGAAGGCAGACCTGAATCACAAC...TGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCTGTGAATTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR TCA 90 bp GACCTTAAGAAGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTATTAGAGGGACAGGGTaGAACATATTTACACCGGCC +
Preference number: 2 (lower is better)
Translates to: DLKKQAWEQGPSSDEFHLIRGTG*NIFTPA
Trigger: GGCCGGTGTAAATATGTTTCACCCTGTCCCTCTAAT...AAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCTTCTTAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
3UTR-3UTR GCA 90 bp GATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACACACCACGAGGTAAACCCCGTGCAGAGTTTGTaGCTCCCTCATCTCTTAGTT +
Preference number: 2 (lower is better)
Translates to: DVCSRGMKGPRQTHHEVNPVQSL*LPHLLV
Trigger: AACTAAGAGATGAGGGAGGCACAAACTCTGCACGGG...GTTTACCTCGTGGTGTGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR CCA 90 bp CCACAATTCACAGACGATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACACTTCTGGTCTCTGTCTaGAAATTTAAGCGCGCCCCC +
Preference number: 2 (lower is better)
Translates to: PQFTDDVCSRGMKGPRQTLLVSV*KFKRAP
Trigger: GGGGGCGCGCTTAAATTTCCAGACAGAGACCAGAAG...TGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCTGTGAATTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR CCA 90 bp AGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGAGGGCAAAGCTAGCCTAGGACATGCCTaGCACCTAAGCAGATACTAC +
Preference number: 2 (lower is better)
Translates to: RRGGIDLETGGSLLEGKASLGHA*HLSRYY
Trigger: GTAGTATCTGCTTAGGTGCCAGGCATGTCCTAGGCT...AGCTTTGCCCTCCAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR GCA 90 bp AAAAAGAAACATAATATCCTGAGCTGGCAGGAGCACAAGGAAATGGGTCTCGTGTGTACTCGGGAGCCATaGATGGCCTGCGCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: KKKHNILSWQEHKEMGLVCTREP*MACAGG
Trigger: CCCTCCTGCGCAGGCCATGCATGGCTCCCGAGTACA...CACGAGACCCATTTCCTTGTGCTCCTGCCAGCTCAGGATATTATGTTTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR TCA 90 bp AGGTGGAGCAGAGGAGCTTTATTAGAGGGACAGGGTGAAACATATTTACACCGGATTAGAGGGACAGGGTaGAACATATTTACACCGGCC +
Preference number: 2 (lower is better)
Translates to: RWSRGALLEGQGETYLHRIRGTG*NIFTPA
Trigger: GGCCGGTGTAAATATGTTTCACCCTGTCCCTCTAAT...CCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAAAGCTCCTCTGCTCCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000379018.7
3UTR CCA 72 bp CCACGTCGTAGCCCTCGGGCGGCTTCACGCGCGCCTTaGCGTGGCTCTCACAGTAGAGCCGCTCGTCCAGAA +
Preference number: 3 (lower is better)
Translates to: PRRSPRAASRAP*RGSHSRAARPE
Trigger: TTCTGGACGAGCGGCTCTACTGTGAGAGCCACGCCAAGGCGCGCGTGAAGCCGCCCGAGGGCTACGACGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
3UTR TCA 72 bp TGGAACAGAAGTGCAGACGGCCCGCGGCGGCCCCGGTaGTCTCCACACTCAATCACCCTCTCCAGGGGAGCG +
Preference number: 3 (lower is better)
Translates to: WNRSADGPRRPR*SPHSITLSRGA
Trigger: CGCTCCCCTGGAGAGGGTGATTGAGTGTGGAGATCACCGGGGCCGCCGCGGGCCGTCTGCACTTCTGTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR CCA 72 bp GCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTaGGGTACACCGCCACCACGTCGTAGCCCTCGGGCG +
Preference number: 3 (lower is better)
Translates to: AGSQLRRVPPWH*GTPPPRRSPRA
Trigger: CGCCCGAGGGCTACGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
3UTR CCA 72 bp CCCGTTGTGATTCAGGTCTGCCTTCCACCCAGGCTGTaGCCCCCTTCAGGGCAGCATGGTACCCGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: PVVIQVCLPPRL*PPSGQHGTRPA
Trigger: AGCAGGACGGGTACCATGCTGCCCTGAAGGGGGCCACAGCCTGGGTGGAAGGCAGACCTGAATCACAACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR GCA 72 bp CGGCCACAGAGGCCTTTCTCGCCCCCAGCTCACCTTTaGACACACAGTTCCCCCGTGCAGAGTTTGTGCCTC +
Preference number: 3 (lower is better)
Translates to: RPQRPFSPPAHL*THSSPVQSLCL
Trigger: GAGGCACAAACTCTGCACGGGGGAACTGTGTGTGCAAAGGTGAGCTGGGGGCGAGAAAGGCCTCTGTGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR-3UTR CAA 90 bp GATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACACACCACGAGGTAAACACAGGAGGGAGCCTCTaGGAGGGCAAAGCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: DVCSRGMKGPRQTHHEVNTGGSL*EGKAAL
Trigger: CAGGGCAGCTTTGCCCTCCAAGAGGCTCCCTCCTGT...GTTTACCTCGTGGTGTGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR TCA 72 bp CCACGCGACCCGGAGTCTAGGACACATCCTCGGGAGTaGACAGCCACAATTCACAGACGATGTGTGCAGCCG +
Preference number: 3 (lower is better)
Translates to: PRDPESRTHPRE*TATIHRRCVQP
Trigger: CGGCTGCACACATCGTCTGTGAATTGTGGCTGTTCACTCCCGAGGATGTGTCCTAGACTCCGGGTCGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR GCA 72 bp CTCGGGAGTGAACAGCCACAATTCACAGACGATGTGTaGAGCCGGGGCATGAAAGGCCCAAGGCAAACACAC +
Preference number: 3 (lower is better)
Translates to: LGSEQPQFTDDV*SRGMKGPRQTH
Trigger: GTGTGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCTGTGAATTGTGGCTGTTCACTCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
3UTR CCA 72 bp CCTGCTCACTACTGCACCCAGAGCCTAGGACATGCCTaGCACCTAAGCAGATACTACTGTACTCGGGAGCCA +
Preference number: 3 (lower is better)
Translates to: PAHYCTQSLGHA*HLSRYYCTREP
Trigger: TGGCTCCCGAGTACAGTAGTATCTGCTTAGGTGCCAGGCATGTCCTAGGCTCTGGGTGCAGTAGTGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp CACCGCCACCACGTCGTAGCCCTCGGGCGGCTTCACGCGCGCCTTGGCGTGGCTCGGAAGGAGCCTGACTaGTTGGGCTCCGCGGCCACG +
Preference number: 4 (lower is better)
Translates to: HRHHVVALGRLHARLGVARKEPD*LGSAAT
Trigger: CGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCG...AGCCACGCCAAGGCGCGCGTGAAGCCGCCCGAGGGCTACGACGTGGTGGCGGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp GTACACCGCCACCACGTCGTAGCCCTCGGGCGGCTTCACGCGCGCCTTGGCGTGCGCAGGGTCACGGAATaGGGCATCGCGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VHRHHVVALGRLHARLGVRRVTE*GIAGWS
Trigger: GCTCCAGCCCGCGATGCCCCATTCCGTGACCCTGCG...CACGCCAAGGCGCGCGTGAAGCCGCCCGAGGGCTACGACGTGGTGGCGGTGTAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp GGTACACCGCCACCACGTCGTAGCCCTCGGGCGGCTTCACGCGCGCCTTGGCGTGGCCACGGGCTCGGCTaGCTCCCGCAGCATCCTGTA +
Preference number: 4 (lower is better)
Translates to: GTPPPRRSPRAASRAPWRGHGLG*LPQHPV
Trigger: TACAGGATGCTGCGGGAGCCAGCCGAGCCCGTGGCC...ACGCCAAGGCGCGCGTGAAGCCGCCCGAGGGCTACGACGTGGTGGCGGTGTACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp GGTACACCGCCACCACGTCGTAGCCCTCGGGCGGCTTCACGCGCGCCTTGGCGTCTGAGGGCCGCCTGCTaGTTGTTGGGCTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: GTPPPRRSPRAASRAPWRLRAAC*LLGCRP
Trigger: AGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAG...ACGCCAAGGCGCGCGTGAAGCCGCCCGAGGGCTACGACGTGGTGGCGGTGTACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp CCGCCACCACGTCGTAGCCCTCGGGCGGCTTCACGCGCGCCTTGGCGTGGCTCTGGGTGGCCTCGCTGCTaGCATTGTGAGGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: PPPRRSPRAASRAPWRGSGWPRC*HCEGLE
Trigger: TTCCAGTCCCTCACAATGGCAGCAGCGAGGCCACCC...AGAGCCACGCCAAGGCGCGCGTGAAGCCGCCCGAGGGCTACGACGTGGTGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp TGGGGTACACCGCCACCACGTCGTAGCCCTCGGGCGGCTTCACGCGCGCCTTGGGCAGGGTGGCCTCGCTaGTGCCATTGTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: WGTPPPRRSPRAASRAPWAGWPR*CHCEGL
Trigger: CAGTCCCTCACAATGGCAGCAGCGAGGCCACCCTGC...CCAAGGCGCGCGTGAAGCCGCCCGAGGGCTACGACGTGGTGGCGGTGTACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp AGGTCATACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTCTGGCCCAGTCCCGGTaGCTGAGGGCCGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSYLLSSRRTQHPRPHLRLAQSR*LRAACW
Trigger: CCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAG...ACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGTATGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp GTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTCGTGGGGCATCGCGGGCTaGAGCCGCAGCCGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VPAQTSSTLALGYTATTSWGIAG*SRSRSL
Trigger: CAGGCTCCGGCTGCGGCTCCAGCCCGCGATGCCCCA...CGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp AAGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGTCCGCGGGAGGCCTCTaGCTGGGTCAGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KQAWEQGPSSDEFHLGIGSAGGL*LGQRWG
Trigger: CCCCCAGCGCTGACCCAGCCAGAGGCCTCCCGCGGA...CCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR TCA 90 bp CCGCCACCACGTCGTAGCCCTCGGGCGGCTTCACGCGCGCCTTGGCGTGGCTCTACAGACAGTGTGAGGTaGTCGTGGCAGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: PPPRRSPRAASRAPWRGSTDSVR*SWQPLM
Trigger: CATCAAGGGCTGCCACGATCACCTCACACTGTCTGT...AGAGCCACGCCAAGGCGCGCGTGAAGCCGCCCGAGGGCTACGACGTGGTGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR TCA 90 bp AGGTCATACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTCCCAGTCCCGGTGCCTaGGGGCCGCCTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: RSYLLSSRRTQHPRPHLRPSPGA*GPPAGC
Trigger: ACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGG...ACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGTATGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp GTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCCAGTCCCGGTGCCTaGGGGCCGCCTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: VGAGSQLRRVPPWHWGTPPSPGA*GPPAGC
Trigger: ACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGG...CGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR TCA 90 bp AGGTCATACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTGGGAGCGATCGCTCCTaGGGCTGCCAGCACCCCACC +
Preference number: 4 (lower is better)
Translates to: RSYLLSSRRTQHPRPHLRGSDRS*GCQHPT
Trigger: GGTGGGGTGCTGGCAGCCTCAGGAGCGATCGCTCCC...ACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGTATGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp AGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGGCTTGTCCCGTGCCTTaGCGATGGTGCCCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SRRGSRVPAQTSSTLALGACPVP*RWCPAL
Trigger: GAGGGCGGGGCACCATCGTCAAGGCACGGGACAAGC...CCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp AGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTCGTAGCCCTGGCCCAGTCCCGGTaGCTGAGGGCCGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSDEFHLGIGVHRHHVVALAQSR*LRAACW
Trigger: CCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAG...GGCTACGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR TCA 90 bp CCGATGACGGCCACAGAGGCCTTTCTCGCCCCCAGCTCACCTTTGCACACACAGCCGCGGCGGCCCCGGTaGTCTCCACACTCAATCACC +
Preference number: 4 (lower is better)
Translates to: PMTATEAFLAPSSPLHTQPRRPR*SPHSIT
Trigger: GGTGATTGAGTGTGGAGATCACCGGGGCCGCCGCGG...CTGTGTGTGCAAAGGTGAGCTGGGGGCGAGAAAGGCCTCTGTGGCCGTCATCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp CGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTATTACTAGAGCTGGCCCGTCGGAAGGAGCCTGACTaGTTGGGCTCCGCGGCCACG +
Preference number: 4 (lower is better)
Translates to: RAARSIPDLTFVLLELARRKEPD*LGSAAT
Trigger: CGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCG...ACGGGCCAGCTCTAGTAATACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp AACGCCGGGACTCTGAGGAGAGGGGTGGAAGCCGGGACTTCGAGGAGGGGTGGACGCCGGCCTCTAGCATaGCCTGCAAGTAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: NAGTLRRGVEAGTSRRGGRRPLA*PASSGR
Trigger: CCTTCCGCTACTTGCAGGGCATGCTAGAGGCCGGCG...TCCACCCCTCCTCGAAGTCCCGGCTTCCACCCCTCTCCTCAGAGTCCCGGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp GCCGGGACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGCACTCGGGCAGCCCCTaGAGGCCGCTCAGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: AGTSRRGGIDLETGGSLLHSGSP*RPLSGA
Trigger: CGCTCCGCTGAGCGGCCTGCAGGGGCTGCCCGAGTG...CAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGTCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp AACGCCGGGACTCTGAGGAGAGGGGTGGAAGCCGGGACTTCGAGGAGGGGTGGATGTACTCGGGAGCCATaGATGGCCTGCGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NAGTLRRGVEAGTSRRGGCTREP*MACAGG
Trigger: CCCTCCTGCGCAGGCCATGCATGGCTCCCGAGTACA...TCCACCCCTCCTCGAAGTCCCGGCTTCCACCCCTCTCCTCAGAGTCCCGGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp AACGCCGGGACTCTGAGGAGAGGGGTGGAAGCCGGGACTTCGAGGAGGGGTGGATCTGGGCTGGCAGGGTaGCCTCGCTGCTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: NAGTLRRGVEAGTSRRGGSGLAG*PRCCHC
Trigger: ACAATGGCAGCAGCGAGGCCACCCTGCCAGCCCAGA...TCCACCCCTCCTCGAAGTCCCGGCTTCCACCCCTCTCCTCAGAGTCCCGGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp TCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTCGTGTAGCGGAAGGAGCCTaGCTGCTTGGGCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: SQLRRVPPWHWGTPPPRRVAEGA*LLGLRG
Trigger: GCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCGCTAC...ACGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp AGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTGCCTGAGGGCCGCCTaGTGGTTGTTGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RVPAQTSSTLALGYTATTCLRAA*WLLGCR
Trigger: ACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCA...CGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp TCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTCGTAGCCCAGGTCGACTCTaGAGTCCCGGCTCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: SQLRRVPPWHWGTPPPRRSPGRL*SPGSAG
Trigger: TCCCGCGGAGCCGGGACTGCAGAGTCGACCTGGGCT...ACGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp GCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTCGCCGGCCTCTAGCATaGCCTGCAAGTAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGVGAGSQLRRVPPWHWGRRPLA*PASSGR
Trigger: CCTTCCGCTACTTGCAGGGCATGCTAGAGGCCGGCG...ACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp AGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACGGTGCTCATCTGGGCTaGCAGGGTGGCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRGSRVPAQTSSTLALGYGAHLG*QGGLAA
Trigger: AGCAGCGAGGCCACCCTGCCAGCCCAGATGAGCACC...GTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp GATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACACACCACGAGGTAAACTCCGCGGGAGGCCTCTaGCTGGGTCAGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DVCSRGMKGPRQTHHEVNSAGGL*LGQRWG
Trigger: CCCCCAGCGCTGACCCAGCCAGAGGCCTCCCGCGGA...GTTTACCTCGTGGTGTGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp CCACGAGGTAAACGCCGGGACTCTGAGGAGAGGGGTGGAAGCCGGGACTTCGAGCAGGAGGGAGCCTCTTaGAGGGCAAAGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PRGKRRDSEERGGSRDFEQEGAS*RAKLPW
Trigger: CCAGGGCAGCTTTGCCCTCCAAGAGGCTCCCTCCTG...CTCGAAGTCCCGGCTTCCACCCCTCTCCTCAGAGTCCCGGCGTTTACCTCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp AAGAAGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGCCAGCATGGACCCGTaGGATGGTGAGGGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: KKQAWEQGPSSDEFHLGIASMDP*DGEGRA
Trigger: AGCGCGCCCCTCACCATCTCACGGGTCCATGCTGGC...AATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR TCA 90 bp CCACAATTCACAGACGATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACATGCTGGCCGTGGGCTTaGGGTTCCGGGGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: PQFTDDVCSRGMKGPRQTCWPWA*GSGGRQ
Trigger: CTGGCGGCCCCCGGAACCTCAAGCCCACGGCCAGCA...TGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCTGTGAATTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp CGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTATTACTAGAGCTGGCCCGTGCTTGTCCCGTGCCTTaGCGATGGTGCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: RAARSIPDLTFVLLELARACPVP*RWCPRC
Trigger: GCATCGTGGGCACCATCGTCAAGGCACGGGACAAGC...ACGGGCCAGCTCTAGTAATACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp CGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTATTACTAGAGCTGGCCCGTGGGTGGCAGGCCAGGTaGCAGGTTCAAGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RAARSIPDLTFVLLELARGWQAR*QVQGGA
Trigger: TGCTCCACCTTGAACCTGTCACCTGGCCTGCCACCC...ACGGGCCAGCTCTAGTAATACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp AGGTCATACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTGCAGGGTGGCCTCGCTaGTGCCATTGTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: RSYLLSSRRTQHPRPHLRAGWPR*CHCEGL
Trigger: CAGTCCCTCACAATGGCAGCAGCGAGGCCACCCTGC...ACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGTATGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp AGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGGAGACACATGCAGGGTaGTCATCTGGGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRRGSRVPAQTSSTLALGETHAG*SSGLAG
Trigger: CCCTGCCAGCCCAGATGAGCACCCTGCATGTGTCTC...CCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp ACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTATTACTAAGCCCAGGTCGACTCTaGAGTCCCGGCTCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: TSCRRAARSIPDLTFVLLSPGRL*SPGSAG
Trigger: TCCCGCGGAGCCGGGACTGCAGAGTCGACCTGGGCT...TAGTAATACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp GATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACACACCACGAGGTAAACCGATGGTGCCCACGATaGCGTGGCCGCAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: DVCSRGMKGPRQTHHEVNRWCPR*RGRSAC
Trigger: GCACGCGCTGCGGCCACGGCATCGTGGGCACCATCG...GTTTACCTCGTGGTGTGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp AGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGGTAGAGCTTGTCCCGTaGCTTGACGATGGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SRRGSRVPAQTSSTLALGVELVP*LDDGAP
Trigger: CGGGGCACCATCGTCAAGGCACGGGACAAGCTCTAC...CCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp CCACAATTCACAGACGATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACATGGGGCATCGCGGGCTaGAGCCGCAGCCGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PQFTDDVCSRGMKGPRQTWGIAG*SRSRSL
Trigger: CAGGCTCCGGCTGCGGCTCCAGCCCGCGATGCCCCA...TGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCTGTGAATTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp TCAATCACCCTCTCCAGGGGAGCGATCGCTCCTGAGGCTGCCAGCACCCCACCAGCCTTGCTGCCAGCATaGACCCGTGAGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SITLSRGAIAPEAASTPPALLPA*TREMVR
Trigger: CCTCACCATCTCACGGGTCCATGCTGGCAGCAAGGC...TGGTGGGGTGCTGGCAGCCTCAGGAGCGATCGCTCCCCTGGAGAGGGTGATTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp CCGATGACGGCCACAGAGGCCTTTCTCGCCCCCAGCTCACCTTTGCACACACAGCCGCCTGCTGGTTGTTaGGCTGCCGTCCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: PMTATEAFLAPSSPLHTQPPAGC*AAVLDL
Trigger: GAGATCCAGGACGGCAGCCCAACAACCAGCAGGCGG...CTGTGTGTGCAAAGGTGAGCTGGGGGCGAGAAAGGCCTCTGTGGCCGTCATCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp AGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACTCTGGGCTGGCAGGGTaGCCTCGCTGCTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: RRGSRVPAQTSSTLALGYSGLAG*PRCCHC
Trigger: ACAATGGCAGCAGCGAGGCCACCCTGCCAGCCCAGA...GTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp CCACGAGGTAAACGCCGGGACTCTGAGGAGAGGGGTGGAAGCCGGGACTTCGAGGCTTCACGCGCGCCTTaGCGTGGCTCTCACAGTAGA +
Preference number: 4 (lower is better)
Translates to: PRGKRRDSEERGGSRDFEASRAP*RGSHSR
Trigger: TCTACTGTGAGAGCCACGCCAAGGCGCGCGTGAAGC...CTCGAAGTCCCGGCTTCCACCCCTCTCCTCAGAGTCCCGGCGTTTACCTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp GGACATGCCTGGCACCTAAGCAGATACTACTGTACTCGGGAGCCATGCATGGCCGCCAGCATGGACCCGTaGGATGGTGAGGGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: GHAWHLSRYYCTREPCMAASMDP*DGEGRA
Trigger: AGCGCGCCCCTCACCATCTCACGGGTCCATGCTGGC...GGCCATGCATGGCTCCCGAGTACAGTAGTATCTGCTTAGGTGCCAGGCATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp GTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTCGGATCGTGGCAGCCCTTaGTGCGGTTCTGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VPAQTSSTLALGYTATTSDRGSP*CGSVPP
Trigger: TGGAGGCACAGAACCGCATCAAGGGCTGCCACGATC...CGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp AAGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGCAGCCAATGCAGCCTTaGTGCCAGCATGGACCCGTG +
Preference number: 4 (lower is better)
Translates to: KQAWEQGPSSDEFHLGIGQPMQP*CQHGPV
Trigger: CACGGGTCCATGCTGGCAGCAAGGCTGCATTGGCTG...CCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp CCACGAGGTAAACGCCGGGACTCTGAGGAGAGGGGTGGAAGCCGGGACTTCGAGGTAGAGCTTGTCCCGTaGCTTGACGATGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PRGKRRDSEERGGSRDFEVELVP*LDDGAH
Trigger: GTGGGCACCATCGTCAAGGCACGGGACAAGCTCTAC...CTCGAAGTCCCGGCTTCCACCCCTCTCCTCAGAGTCCCGGCGTTTACCTCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp GCCCCCAGCTCACCTTTGCACACACAGTTCCCCCGTGCAGAGTTTGTGCCTCCCTGTCATCAGGGGCACTaGGCCAGCTCCTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: APSSPLHTQFPRAEFVPPCHQGH*ASSYPQ
Trigger: CTGAGGGTAGGAGCTGGCCCAGTGCCCCTGATGACA...GGGAGGCACAAACTCTGCACGGGGGAACTGTGTGTGCAAAGGTGAGCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp CACGCGCGCCTTGGCGTGGCTCTCACAGTAGAGCCGCTCGTCCAGAAAGAAGTACCGCCTGCTGGTTGTTaGGCTGCCGTCCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: HARLGVALTVEPLVQKEVPPAGC*AAVLDL
Trigger: GAGATCCAGGACGGCAGCCCAACAACCAGCAGGCGG...TACTTCTTTCTGGACGAGCGGCTCTACTGTGAGAGCCACGCCAAGGCGCGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp GGCCTTTCTCGCCCCCAGCTCACCTTTGCACACACAGTTCCCCCGTGCAGAGTTTGGCTGGGTCAGCGCTaGGGGGTGGAGACACATGCA +
Preference number: 4 (lower is better)
Translates to: GLSRPQLTFAHTVPPCRVWLGQR*GVETHA
Trigger: TGCATGTGTCTCCACCCCCCAGCGCTGACCCAGCCA...AACTCTGCACGGGGGAACTGTGTGTGCAAAGGTGAGCTGGGGGCGAGAAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp AAGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGCTTCACGCGCGCCTTaGCGTGGCTCTCACAGTAGA +
Preference number: 4 (lower is better)
Translates to: KQAWEQGPSSDEFHLGIGASRAP*RGSHSR
Trigger: TCTACTGTGAGAGCCACGCCAAGGCGCGCGTGAAGC...CCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR TCA 90 bp AGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACAGTAACCACGCTGCTTaGGGTTCAGGCCGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RRGSRVPAQTSSTLALGYSNHAA*GSGRSH
Trigger: GTGACTGCGGCCTGAACCTCAAGCAGCGTGGTTACT...GTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp ACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGAGGGCAACCTGGAACAGAAGTaGAGACGGCCCGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TSRRGGIDLETGGSLLEGNLEQK*RRPAAA
Trigger: GGCCGCCGCGGGCCGTCTGCACTTCTGTTCCAGGTT...GCCCTCCAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp CCACAATTCACAGACGATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACACGCAGGGTCACGGAATaGGGCATCGCGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PQFTDDVCSRGMKGPRQTRRVTE*GIAGWS
Trigger: GCTCCAGCCCGCGATGCCCCATTCCGTGACCCTGCG...TGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCTGTGAATTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp CTTCACGCGCGCCTTGGCGTGGCTCTCACAGTAGAGCCGCTCGTCCAGAAAGAACTGGATCAGGTCTCCTaGGCACAGGGCAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: LHARLGVALTVEPLVQKELDQVS*AQGSQC
Trigger: GCATTGGCTGCCCTGTGCCCAGGAGACCTGATCCAG...TTCTTTCTGGACGAGCGGCTCTACTGTGAGAGCCACGCCAAGGCGCGCGTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp AGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTCGTAGCCTGTCATCAGGGGCACTaGGCCAGCTCCTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSDEFHLGIGVHRHHVVACHQGH*ASSYPQ
Trigger: CTGAGGGTAGGAGCTGGCCCAGTGCCCCTGATGACA...GGCTACGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp GCAGGGACCTTAAGAAGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCGTTGGGCTGCCGTCCTaGATCTCAGGATCGATGTGG +
Preference number: 4 (lower is better)
Translates to: AGTLRSRRGSRVPAQTSSVGLPS*ISGSMW
Trigger: CCACATCGATCCTGAGATCCAGGACGGCAGCCCAAC...GGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCTTCTTAAGGTCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp ACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGAGGGCCTGAGGGCCGCCTGCTaGTTGTTGGGCTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: TSRRGGIDLETGGSLLEGLRAAC*LLGCRP
Trigger: AGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAG...GCCCTCCAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp CGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTATTACTAGAGCTGGCCCGTTGGAGATCCCAGGCTTaGTCTGCCATCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RAARSIPDLTFVLLELARWRSQA*SAIFWP
Trigger: GGGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCA...ACGGGCCAGCTCTAGTAATACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp GGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTCTGGAGATCCCAGGCTTaGTCTGCCATCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GPSSDEFHLGIGVHRHHVWRSQA*SAIFWP
Trigger: GGGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCA...GACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp GTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTCGGCCATTGTGAGGGACTaGAAAGCGAGGGGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: VPAQTSSTLALGYTATTSAIVRD*KARGLS
Trigger: GGACAACCCCCTCGCTTTCCAGTCCCTCACAATGGC...CGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp ACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGAGGGCGGTGCTCATCTGGGCTaGCAGGGTGGCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TSRRGGIDLETGGSLLEGGAHLG*QGGLAA
Trigger: AGCAGCGAGGCCACCCTGCCAGCCCAGATGAGCACC...GCCCTCCAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp AGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGAGGGCAAAGCTGGCCACGGGCTCGGCTaGCTCCCGCAGCATCCTGTA +
Preference number: 4 (lower is better)
Translates to: RRGGIDLETGGSLLEGKAGHGLG*LPQHPV
Trigger: TACAGGATGCTGCGGGAGCCAGCCGAGCCCGTGGCC...AGCTTTGCCCTCCAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp AGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGAGACGAGTTCCACCTTaGCATTGGGGTACACCGCCA +
Preference number: 4 (lower is better)
Translates to: SRRGSRVPAQTSSTLALGRRVPP*HWGTPP
Trigger: TGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCT...CCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR TCA 90 bp CCGATGACGGCCACAGAGGCCTTTCTCGCCCCCAGCTCACCTTTGCACACACAGCCTCCAGGTGTGTCATaGGCTCTGTGCTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: PMTATEAFLAPSSPLHTQPPGVS*ALCSHH
Trigger: ATGGTGAGAGCACAGAGCTCATGACACACCTGGAGG...CTGTGTGTGCAAAGGTGAGCTGGGGGCGAGAAAGGCCTCTGTGGCCGTCATCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp CTTCACGCGCGCCTTGGCGTGGCTCTCACAGTAGAGCCGCTCGTCCAGAAAGAATGGATCCTGTGTGCCTaGGCCTTGCTGTCATCAGGG +
Preference number: 4 (lower is better)
Translates to: LHARLGVALTVEPLVQKEWILCA*ALLSSG
Trigger: CCCTGATGACAGCAAGGCTCAGGCACACAGGATCCA...TTCTTTCTGGACGAGCGGCTCTACTGTGAGAGCCACGCCAAGGCGCGCGTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR TCA 90 bp GCCCCCAGCTCACCTTTGCACACACAGTTCCCCCGTGCAGAGTTTGTGCCTCCCGAGGAGGGGTGGAATTaGCTTAGAGACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: APSSPLHTQFPRAEFVPPEEGWN*LRDRRE
Trigger: CTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTC...GGGAGGCACAAACTCTGCACGGGGGAACTGTGTGTGCAAAGGTGAGCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp CACGCGCGCCTTGGCGTGGCTCTCACAGTAGAGCCGCTCGTCCAGAAAGAAGTACCAATGCAGCCTTGCTaGCAGCATGGACCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: HARLGVALTVEPLVQKEVPMQPC*QHGPVR
Trigger: TCTCACGGGTCCATGCTGGCAGCAAGGCTGCATTGG...TACTTCTTTCTGGACGAGCGGCTCTACTGTGAGAGCCACGCCAAGGCGCGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp CCACAATTCACAGACGATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACATGCCTGAGGGCCGCCTaGTGGTTGTTGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: PQFTDDVCSRGMKGPRQTCLRAA*WLLGCR
Trigger: ACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCA...TGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCTGTGAATTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp AGGTCATACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTTCACCATTGATGGCCTaGATCAGGTCTCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RSYLLSSRRTQHPRPHLRSPLMA*IRSPGH
Trigger: GTGCCCAGGAGACCTGATCCAGGCCATCAATGGTGA...ACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGTATGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp GGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACATCACCATTGATGGCCTaGATCAGGTCTCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GVGAGSQLRRVPPWHWGTSPLMA*IRSPGH
Trigger: GTGCCCAGGAGACCTGATCCAGGCCATCAATGGTGA...TGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp GGACATGCCTGGCACCTAAGCAGATACTACTGTACTCGGGAGCCATGCATGGCCCTTCCACCCAGGCTGTaGCCCCCTTCAGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GHAWHLSRYYCTREPCMALPPRL*PPSGQH
Trigger: ATGCTGCCCTGAAGGGGGCCACAGCCTGGGTGGAAG...GGCCATGCATGGCTCCCGAGTACAGTAGTATCTGCTTAGGTGCCAGGCATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp AGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTCGTAGCCCTGTGCTCTCACCATTaGTGGCCTGGATCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSDEFHLGIGVHRHHVVALCSHH*WPGSGL
Trigger: GAGACCTGATCCAGGCCATCAATGGTGAGAGCACAG...GGCTACGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR TCA 90 bp ACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTATTACTAAGTAACCACGCTGCTTaGGGTTCAGGCCGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: TSCRRAARSIPDLTFVLLSNHAA*GSGRSH
Trigger: GTGACTGCGGCCTGAACCTCAAGCAGCGTGGTTACT...TAGTAATACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp ACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGAGGGCGCACAGGGCAGCCAATaGAGCCTTGCTGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: TSRRGGIDLETGGSLLEGAQGSQ*SLAASM
Trigger: CATGCTGGCAGCAAGGCTGCATTGGCTGCCCTGTGC...GCCCTCCAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp AGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGGATGTGGATCCTGTGTaGCTGAGCCTTGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: RVPAQTSSTLALGYTATTDVDPV*LSLAVI
Trigger: GATGACAGCAAGGCTCAGGCACACAGGATCCACATC...CGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp CTTCACGCGCGCCTTGGCGTGGCTCTCACAGTAGAGCCGCTCGTCCAGAAAGAATGCTGGTTGTTGGGCTaGCGTCCTGGATCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LHARLGVALTVEPLVQKECWLLG*RPGSQD
Trigger: ATCCTGAGATCCAGGACGGCAGCCCAACAACCAGCA...TTCTTTCTGGACGAGCGGCTCTACTGTGAGAGCCACGCCAAGGCGCGCGTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp GGACATGCCTGGCACCTAAGCAGATACTACTGTACTCGGGAGCCATGCATGGCCGAGACACATGCAGGGTaGTCATCTGGGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GHAWHLSRYYCTREPCMAETHAG*SSGLAG
Trigger: CCCTGCCAGCCCAGATGAGCACCCTGCATGTGTCTC...GGCCATGCATGGCTCCCGAGTACAGTAGTATCTGCTTAGGTGCCAGGCATGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp TTATTAGAGGGACAGGGTGAAACATATTTACACCGGCCGAGCAGGGACCTTAAGCGTGGCCGCAGCGCGTaGACTCGGGCAGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLEGQGETYLHRPSRDLKRGRSA*TRAAPA
Trigger: TGCAGGGGCTGCCCGAGTGCACGCGCTGCGGCCACG...CTTAAGGTCCCTGCTCGGCCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp GGCCTTTCTCGCCCCCAGCTCACCTTTGCACACACAGTTCCCCCGTGCAGAGTTGTTGTGATTCAGGTCTaGCTTCCACCCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GLSRPQLTFAHTVPPCRVVVIQV*LPPRLW
Trigger: CCACAGCCTGGGTGGAAGGCAGACCTGAATCACAAC...AACTCTGCACGGGGGAACTGTGTGTGCAAAGGTGAGCTGGGGGCGAGAAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp GCCGGGACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGCACACAGTTCCCCCGTaGAGAGTTTGTGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AGTSRRGGIDLETGGSLLHTVPP*RVCASL
Trigger: GAGGGAGGCACAAACTCTGCACGGGGGAACTGTGTG...CAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGTCCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp GATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACACACCACGAGGTAAACCCCCCAGCTCACCTTTaGACACACAGTTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: DVCSRGMKGPRQTHHEVNPPAHL*THSSPV
Trigger: CACGGGGGAACTGTGTGTGCAAAGGTGAGCTGGGGG...GTTTACCTCGTGGTGTGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp CCTGCTCACTACTGCACCCAGAGCCTAGGACATGCCTGGCACCTAAGCAGATACCTGGATCAGGTCTCCTaGGCACAGGGCAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: PAHYCTQSLGHAWHLSRYLDQVS*AQGSQC
Trigger: GCATTGGCTGCCCTGTGCCCAGGAGACCTGATCCAG...GTATCTGCTTAGGTGCCAGGCATGTCCTAGGCTCTGGGTGCAGTAGTGAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp AGACGATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACACACCACGAGGTGTTGGGCTGCCGTCCTaGATCTCAGGATCGATGTGG +
Preference number: 4 (lower is better)
Translates to: RRCVQPGHERPKANTPRGVGLPS*ISGSMW
Trigger: CCACATCGATCCTGAGATCCAGGACGGCAGCCCAAC...ACCTCGTGGTGTGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp GCCGGGACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGCTGTGCTCTCACCATTaGTGGCCTGGATCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: AGTSRRGGIDLETGGSLLLCSHH*WPGSGL
Trigger: GAGACCTGATCCAGGCCATCAATGGTGAGAGCACAG...CAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGTCCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp AGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGAGGGCAAAGCTGATCGTGGCAGCCCTTaGTGCGGTTCTGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRGGIDLETGGSLLEGKADRGSP*CGSVPP
Trigger: TGGAGGCACAGAACCGCATCAAGGGCTGCCACGATC...AGCTTTGCCCTCCAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp GGACATGCCTGGCACCTAAGCAGATACTACTGTACTCGGGAGCCATGCATGGCCAGAGCTGGCCCGTTGTaGTTCAGGTCTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GHAWHLSRYYCTREPCMARAGPL*FRSAFH
Trigger: GTGGAAGGCAGACCTGAATCACAACGGGCCAGCTCT...GGCCATGCATGGCTCCCGAGTACAGTAGTATCTGCTTAGGTGCCAGGCATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp CGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTATTACTAGAGCTGGCCCGTACACATCCTCGGGAGTaGACAGCCACAATTCACAGA +
Preference number: 4 (lower is better)
Translates to: RAARSIPDLTFVLLELARTHPRE*TATIHR
Trigger: TCTGTGAATTGTGGCTGTTCACTCCCGAGGATGTGT...ACGGGCCAGCTCTAGTAATACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp CCACAATTCACAGACGATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACACAGCCAATGCAGCCTTaGTGCCAGCATGGACCCGTG +
Preference number: 4 (lower is better)
Translates to: PQFTDDVCSRGMKGPRQTQPMQP*CQHGPV
Trigger: CACGGGTCCATGCTGGCAGCAAGGCTGCATTGGCTG...TGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCTGTGAATTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp CCGATGACGGCCACAGAGGCCTTTCTCGCCCCCAGCTCACCTTTGCACACACAGCCCGTGCAGAGTTTGTaGCTCCCTCATCTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: PMTATEAFLAPSSPLHTQPVQSL*LPHLLV
Trigger: AACTAAGAGATGAGGGAGGCACAAACTCTGCACGGG...CTGTGTGTGCAAAGGTGAGCTGGGGGCGAGAAAGGCCTCTGTGGCCGTCATCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp ACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTATTACTAAGACGAGTTCCACCTTaGCATTGGGGTACACCGCCA +
Preference number: 4 (lower is better)
Translates to: TSCRRAARSIPDLTFVLLRRVPP*HWGTPP
Trigger: TGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCT...TAGTAATACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp GCCCCCAGCTCACCTTTGCACACACAGTTCCCCCGTGCAGAGTTTGTGCCTCCCAGCCTAGGACATGCCTaGCACCTAAGCAGATACTAC +
Preference number: 4 (lower is better)
Translates to: APSSPLHTQFPRAEFVPPSLGHA*HLSRYY
Trigger: GTAGTATCTGCTTAGGTGCCAGGCATGTCCTAGGCT...GGGAGGCACAAACTCTGCACGGGGGAACTGTGTGTGCAAAGGTGAGCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp AGGTGGAGCAGAGGAGCTTTATTAGAGGGACAGGGTGAAACATATTTACACCGGGTAGCGGAAGGAGCCTaGCTGCTTGGGCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RWSRGALLEGQGETYLHRVAEGA*LLGLRG
Trigger: GCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCGCTAC...CCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAAAGCTCCTCTGCTCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000379018.7
CDS-3UTR TCA 90 bp GGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTCATTAGAGGGACAGGGTaGAACATATTTACACCGGCC +
Preference number: 4 (lower is better)
Translates to: GPSSDEFHLGIGVHRHHVIRGTG*NIFTPA
Trigger: GGCCGGTGTAAATATGTTTCACCCTGTCCCTCTAAT...GACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR GCA 90 bp GCCGGGACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGATGTGGATCCTGTGTaGCTGAGCCTTGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: AGTSRRGGIDLETGGSLLDVDPV*LSLAVI
Trigger: GATGACAGCAAGGCTCAGGCACACAGGATCCACATC...CAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGTCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp GCCGGGACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGCTTGGAGGGCAAAGCTaGCCTGGGCAAGTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: AGTSRRGGIDLETGGSLLLGGQS*PGQVFF
Trigger: AAAGAACACTTGCCCAGGGCAGCTTTGCCCTCCAAG...CAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGTCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp GACCTTAAGAAGCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTAGGGGGTTGTCCATATaGAGATCCCAGGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: DLKKQAWEQGPSSDEFHLRGLSI*RSQAWS
Trigger: AGACCAAGCCTGGGATCTCCATATGGACAACCCCCT...AAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGCTTCTTAAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CCA 90 bp TTATTAGAGGGACAGGGTGAAACATATTTACACCGGCCGAGCAGGGACCTTAAGAGGAGCCTGACTGCTTaGGCTCCGCGGCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: LLEGQGETYLHRPSRDLKRSLTA*APRPRA
Trigger: AGCCCGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCT...CTTAAGGTCCCTGCTCGGCCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000379018.7
CDS-3UTR CCA 90 bp AGGTGGAGCAGAGGAGCTTTATTAGAGGGACAGGGTGAAACATATTTACACCGGAGGAGCCTGACTGCTTaGGCTCCGCGGCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: RWSRGALLEGQGETYLHRRSLTA*APRPRA
Trigger: AGCCCGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCT...CCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAAAGCTCCTCTGCTCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000379018.7
CDS-3UTR TCA 90 bp CGAGTCAGTTTCTTCTCCCGAGCAAGTAAACTAGAGGGTAGATCCACGCGACCCTGGATCCTGTGTGCCTaGGCCTTGCTGTCATCAGGG +
Preference number: 4 (lower is better)
Translates to: RVSFFSRASKLEGRSTRPWILCA*ALLSSG
Trigger: CCCTGATGACAGCAAGGCTCAGGCACACAGGATCCA...GGGTCGCGTGGATCTACCCTCTAGTTTACTTGCTCGGGAGAAGAAACTGACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp ACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTATTACTACGGAGGAGAATAAAGTaGTCGTGGGTGGAAGAAACC +
Preference number: 4 (lower is better)
Translates to: TSCRRAARSIPDLTFVLLRRRIK*SWVEET
Trigger: GGTTTCTTCCACCCACGAGCACTTTATTCTCCTCCG...TAGTAATACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp CCACAATTCACAGACGATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACATTCACAGACGATGTGTaGAGCCGGGGCATGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PQFTDDVCSRGMKGPRQTFTDDV*SRGMKG
Trigger: GCCTTTCATGCCCCGGCTGCACACATCGTCTGTGAA...TGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCTGTGAATTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp ACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGAGGGCAGGGGGTTGTCCATATaGAGATCCCAGGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: TSRRGGIDLETGGSLLEGRGLSI*RSQAWS
Trigger: AGACCAAGCCTGGGATCTCCATATGGACAACCCCCT...GCCCTCCAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp CTCACCTTCGTATTACTAGAGCTGGCCCGTTGTGATTCAGGTCTGCCTTCCACCGCCATTGTGAGGGACTaGAAAGCGAGGGGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LTFVLLELARCDSGLPSTAIVRD*KARGLS
Trigger: GGACAACCCCCTCGCTTTCCAGTCCCTCACAATGGC...GGTGGAAGGCAGACCTGAATCACAACGGGCCAGCTCTAGTAATACGAAGGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp AAAAAGAAACATAATATCCTGAGCTGGCAGGAGCACAAGGAAATGGGTCTCGTGGTGCCCACGATGCCGTaGCCGCAGCGCGTGCACTCG +
Preference number: 4 (lower is better)
Translates to: KKKHNILSWQEHKEMGLVVPTMP*PQRVHS
Trigger: CGAGTGCACGCGCTGCGGCCACGGCATCGTGGGCAC...CACGAGACCCATTTCCTTGTGCTCCTGCCAGCTCAGGATATTATGTTTCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp CGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTATTACTAGAGCTGGCCCGTCATAATATCCTGAGCTaGCAGGAGCACAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: RAARSIPDLTFVLLELARHNILS*QEHKEM
Trigger: CATTTCCTTGTGCTCCTGCCAGCTCAGGATATTATG...ACGGGCCAGCTCTAGTAATACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp CTCACCTTCGTATTACTAGAGCTGGCCCGTTGTGATTCAGGTCTGCCTTCCACCACAGACAGTGTGAGGTaGTCGTGGCAGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: LTFVLLELARCDSGLPSTTDSVR*SWQPLM
Trigger: CATCAAGGGCTGCCACGATCACCTCACACTGTCTGT...GGTGGAAGGCAGACCTGAATCACAACGGGCCAGCTCTAGTAATACGAAGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp CTCACCTTCGTATTACTAGAGCTGGCCCGTTGTGATTCAGGTCTGCCTTCCACCCGCAGTCACTGCACATaGAGCACTCGGGATGGTAGA +
Preference number: 4 (lower is better)
Translates to: LTFVLLELARCDSGLPSTRSHCT*STRDGR
Trigger: TCTACCATCCCGAGTGCTTCATGTGCAGTGACTGCG...GGTGGAAGGCAGACCTGAATCACAACGGGCCAGCTCTAGTAATACGAAGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp AGGTGGAGCAGAGGAGCTTTATTAGAGGGACAGGGTGAAACATATTTACACCGGTGGCTGGGTCAGCGCTaGGGGGTGGAGACACATGCA +
Preference number: 4 (lower is better)
Translates to: RWSRGALLEGQGETYLHRWLGQR*GVETHA
Trigger: TGCATGTGTCTCCACCCCCCAGCGCTGACCCAGCCA...CCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAAAGCTCCTCTGCTCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000379018.7
CDS-3UTR CCA 90 bp AGGTCATACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTTGGGTGGAAGAAACCTaGAACAGAAAATGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RSYLLSSRRTQHPRPHLRWVEET*NRKCQK
Trigger: TTTCTGGCATTTTCTGTTCCAGGTTTCTTCCACCCA...ACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGTATGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CCA 90 bp AGGTGGAGCAGAGGAGCTTTATTAGAGGGACAGGGTGAAACATATTTACACCGGTTTAAGCGCGCCCCCTaGTGGGGGAGAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RWSRGALLEGQGETYLHRFKRAP*WGREEG
Trigger: CCCTTCCTCTCTCCCCCACCAGGGGGCGCGCTTAAA...CCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAAAGCTCCTCTGCTCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp AGGTGGAGCAGAGGAGCTTTATTAGAGGGACAGGGTGAAACATATTTACACCGGGGGTGGCCTCGCTGCTaGCATTGTGAGGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: RWSRGALLEGQGETYLHRGWPRC*HCEGLE
Trigger: TTCCAGTCCCTCACAATGGCAGCAGCGAGGCCACCC...CCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAAAGCTCCTCTGCTCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000379018.7
CDS-3UTR CCA 90 bp CTCACCTTCGTATTACTAGAGCTGGCCCGTTGTGATTCAGGTCTGCCTTCCACCCTTCTGGTCTCTGTCTaGAAATTTAAGCGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: LTFVLLELARCDSGLPSTLLVSV*KFKRAP
Trigger: GGGGGCGCGCTTAAATTTCCAGACAGAGACCAGAAG...GGTGGAAGGCAGACCTGAATCACAACGGGCCAGCTCTAGTAATACGAAGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR GCA 90 bp AGGTGGAGCAGAGGAGCTTTATTAGAGGGACAGGGTGAAACATATTTACACCGGCCAATGCAGCCTTGCTaGCAGCATGGACCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: RWSRGALLEGQGETYLHRPMQPC*QHGPVR
Trigger: TCTCACGGGTCCATGCTGGCAGCAAGGCTGCATTGG...CCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAAAGCTCCTCTGCTCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000379018.7
CDS-3UTR CCA 90 bp GGACATGCCTGGCACCTAAGCAGATACTACTGTACTCGGGAGCCATGCATGGCCAGAATAAAGTGCTCGTaGGTGGAAGAAACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GHAWHLSRYYCTREPCMARIKCS*VEETWN
Trigger: GTTCCAGGTTTCTTCCACCCACGAGCACTTTATTCT...GGCCATGCATGGCTCCCGAGTACAGTAGTATCTGCTTAGGTGCCAGGCATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp TTATTAGAGGGACAGGGTGAAACATATTTACACCGGCCGAGCAGGGACCTTAAGCGCAGTCACTGCACATaGAGCACTCGGGATGGTAGA +
Preference number: 4 (lower is better)
Translates to: LLEGQGETYLHRPSRDLKRSHCT*STRDGR
Trigger: TCTACCATCCCGAGTGCTTCATGTGCAGTGACTGCG...CTTAAGGTCCCTGCTCGGCCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000379018.7
CDS-3UTR GCA 90 bp AAAAAGAAACATAATATCCTGAGCTGGCAGGAGCACAAGGAAATGGGTCTCGTGTGCTGGTTGTTGGGCTaGCGTCCTGGATCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KKKHNILSWQEHKEMGLVCWLLG*RPGSQD
Trigger: ATCCTGAGATCCAGGACGGCAGCCCAACAACCAGCA...CACGAGACCCATTTCCTTGTGCTCCTGCCAGCTCAGGATATTATGTTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR TCA 90 bp TTATTAGAGGGACAGGGTGAAACATATTTACACCGGCCGAGCAGGGACCTTAAGATTAGAGGGACAGGGTaGAACATATTTACACCGGCC +
Preference number: 4 (lower is better)
Translates to: LLEGQGETYLHRPSRDLKIRGTG*NIFTPA
Trigger: GGCCGGTGTAAATATGTTTCACCCTGTCCCTCTAAT...CTTAAGGTCCCTGCTCGGCCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000379018.7
CDS GCA 90 bp GTGCCCACGATGCCGTGGCCGCAGCGCGTGCACTCGGGCAGCCCCTaGAGGCCGCTCAGCGGAGCGCCCAGCTTGCTGGCCGTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: VPTMPWPQRVHSGSP*RPLSGAPSLLAVGL
Trigger: CAAGCCCACGGCCAGCAAGCTGGGCGCTCCGCTGAGCGGCCTGCAGGGGCTGCCCGAGTGCACGCGCTGCGGCCACGGCATCGTGGGCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000462597.1
CDS GCA 90 bp CAAGGGCGTGGGACCGGGCCGCAGAGACCGAAGAGGGCAGGTGACTaGGAGGCGGGACGTGGGGTCGCTAGGGGGCAACCTGGGCACTGC +
Preference number: 5 (lower is better)
Translates to: QGRGTGPQRPKRAGD*EAGRGVARGQPGHC
Trigger: GCAGTGCCCAGGTTGCCCCCTAGCGACCCCACGTCCCGCCTCGCAGTCACCTGCCCTCTTCGGTCTCTGCGGCCCGGTCCCACGCCCTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS-3UTR CAA 90 bp CCGCCACCACGTCGTAGCCCTCGGGCGGCTTCACGCGCGCCTTGGCGTGGCTCTAGGGCCGCCTGCTGGTaGTTGGGCTGCCGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PPPRRSPRAASRAPWRGSRAACW*LGCRPG
Trigger: TCCAGGACGGCAGCCCAACAACCAGCAGGCGGCCCT...AGAGCCACGCCAAGGCGCGCGTGAAGCCGCCCGAGGGCTACGACGTGGTGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CAA 90 bp GTACACCGCCACCACGTCGTAGCCCTCGGGCGGCTTCACGCGCGCCTTGGCGTGAAGGAGCCTGACTGCTaGGGCTCCGCGGCCACGGGC +
Preference number: 5 (lower is better)
Translates to: VHRHHVVALGRLHARLGVKEPDC*GSAATG
Trigger: GCCCGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCTT...CACGCCAAGGCGCGCGTGAAGCCGCCCGAGGGCTACGACGTGGTGGCGGTGTAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS GCA 90 bp CTGGCTCCCGCAGCATCCTGTACACCTCGGAGCCCAGGTCGACTCTaGAGTCCCGGCTCCGCGGGAGGCCTCTGGCTGGGTCAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LAPAASCTPRSPGRL*SPGSAGGLWLGQRW
Trigger: CCAGCGCTGACCCAGCCAGAGGCCTCCCGCGGAGCCGGGACTGCAGAGTCGACCTGGGCTCCGAGGTGTACAGGATGCTGCGGGAGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000462597.1
ENST00000474421.1
ENST00000484620.1
CDS GCA 90 bp GGGGACAGGTGGCAGGCGTCTTACCGCCCTCGCCGGCCTCTAGCATaGCCTGCAAGTAGCGGAAGGAGCCTGACTGCTTGGGCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: GDRWQASYRPRRPLA*PASSGRSLTAWAPR
Trigger: CCGCGGAGCCCAAGCAGTCAGGCTCCTTCCGCTACTTGCAGGGCATGCTAGAGGCCGGCGAGGGCGGTAAGACGCCTGCCACCTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS CCA 90 bp CGGCCTCTAGCATGCCCTGCAAGTAGCGGAAGGAGCCTGACTGCTTaGGCTCCGCGGCCACGGGCTCGGCTGGCTCCCGCAGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: RPLACPASSGRSLTA*APRPRARLAPAASC
Trigger: ACAGGATGCTGCGGGAGCCAGCCGAGCCCGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCGCTACTTGCAGGGCATGCTAGAGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000462597.1
ENST00000474421.1
ENST00000484620.1
CDS CCA 90 bp GTCGCTAGGGGGCAACCTGGGCACTGCAGGGAGTGGGAAGGCAGATaGGGACAGGTGGCAGGCGTCTTACCGCCCTCGCCGGCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: VARGQPGHCREWEGR*GQVAGVLPPSPASS
Trigger: GCTAGAGGCCGGCGAGGGCGGTAAGACGCCTGCCACCTGTCCCCATCTGCCTTCCCACTCCCTGCAGTGCCCAGGTTGCCCCCTAGCGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS CCA 90 bp GGCAACCTGGGCACTGCAGGGAGTGGGAAGGCAGATGGGGACAGGTaGCAGGCGTCTTACCGCCCTCGCCGGCCTCTAGCATGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: GNLGTAGSGKADGDR*QASYRPRRPLACPA
Trigger: TGCAGGGCATGCTAGAGGCCGGCGAGGGCGGTAAGACGCCTGCCACCTGTCCCCATCTGCCTTCCCACTCCCTGCAGTGCCCAGGTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS-3UTR CAA 90 bp CCGATGACGGCCACAGAGGCCTTTCTCGCCCCCAGCTCACCTTTGCACACACAGAGCGGAGCGCCCAGCTaGCTGGCCGTGGGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: PMTATEAFLAPSSPLHTQSGAPS*LAVGLR
Trigger: CCTCAAGCCCACGGCCAGCAAGCTGGGCGCTCCGCT...CTGTGTGTGCAAAGGTGAGCTGGGGGCGAGAAAGGCCTCTGTGGCCGTCATCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS TCA 90 bp AGATCCCAGGCTTGGTCTGCCATCTTCTGGCCCAGTCCCGGTGCCTaGGGGCCGCCTGCTGGTTGTTGGGCTGCCGTCCTGGATCTCAGG +
Preference number: 5 (lower is better)
Translates to: RSQAWSAIFWPSPGA*GPPAGCWAAVLDLR
Trigger: CCTGAGATCCAGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGCCTGGGATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS GCA 90 bp ATGGAGATCCCAGGCTTGGTCTGCCATCTTCTGGCCCAGTCCCGGTaGCTGAGGGCCGCCTGCTGGTTGTTGGGCTGCCGTCCCGTGAGA +
Preference number: 5 (lower is better)
Translates to: MEIPGLVCHLLAQSR*LRAACWLLGCRPVR
Trigger: TCTCACGGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474421.1
CDS-3UTR CAA 90 bp GCCCCCAGCTCACCTTTGCACACACAGTTCCCCCGTGCAGAGTTTGTGCCTCCCAGGGCCGCCTGCTGGTaGTTGGGCTGCCGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: APSSPLHTQFPRAEFVPPRAACW*LGCRPG
Trigger: TCCAGGACGGCAGCCCAACAACCAGCAGGCGGCCCT...GGGAGGCACAAACTCTGCACGGGGGAACTGTGTGTGCAAAGGTGAGCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS TCA 90 bp AGATCCCAGGCTTGGTCTGCCATCTTCTGGCCCAGTCCCGGTGCCTaGGGGCCGCCTGCTGGTTGTTGGGCTGCCGTCCTTCCTGAACTG +
Preference number: 5 (lower is better)
Translates to: RSQAWSAIFWPSPGA*GPPAGCWAAVLPEL
Trigger: CAGTTCAGGAAGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGCCTGGGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484620.1
CDS GCA 90 bp ATGGAGATCCCAGGCTTGGTCTGCCATCTTCTGGCCCAGTCCCGGTaGCTGAGGGCCGCCTGCTGGTTGTTGGGCTGCCGTCCTGGATCT +
Preference number: 5 (lower is better)
Translates to: MEIPGLVCHLLAQSR*LRAACWLLGCRPGS
Trigger: AGATCCAGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS GCA 90 bp CTGGAAAGCGAGGGGGTTGTCCATATGGAGATCCCAGGCTTGGTCTaGCATCTTCTGGCCCAGTCCCGGTGCCTGAGGGCCGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LESEGVVHMEIPGLV*HLLAQSRCLRAACW
Trigger: CCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCATATGGACAACCCCCTCGCTTTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000474421.1
ENST00000484620.1
CDS-3UTR CAA 90 bp AACGCCGGGACTCTGAGGAGAGGGGTGGAAGCCGGGACTTCGAGGAGGGGTGGACAGACGAGTTCCACCTaGGCATTGGGGTACACCGCC +
Preference number: 5 (lower is better)
Translates to: NAGTLRRGVEAGTSRRGGQTSST*ALGYTA
Trigger: GGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTG...TCCACCCCTCCTCGAAGTCCCGGCTTCCACCCCTCTCCTCAGAGTCCCGGCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CAA 90 bp TCAATCACCCTCTCCAGGGGAGCGATCGCTCCTGAGGCTGCCAGCACCCCACCAACAGGAGGGAGCCTCTaGGAGGGCAAAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: SITLSRGAIAPEAASTPPTGGSL*EGKAAL
Trigger: CAGGGCAGCTTTGCCCTCCAAGAGGCTCCCTCCTGT...TGGTGGGGTGCTGGCAGCCTCAGGAGCGATCGCTCCCCTGGAGAGGGTGATTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS GCA 90 bp TTGGTCTGCCATCTTCTGGCCCAGTCCCGGTGCCTGAGGGCCGCCTaGTGGTTGTTGGGCTGCCGTCCTGGATCTCAGGATCGATGTGGA +
Preference number: 5 (lower is better)
Translates to: LVCHLLAQSRCLRAA*WLLGCRPGSQDRCG
Trigger: TCCACATCGATCCTGAGATCCAGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS GCA 90 bp AGCGTAGGTGGCATGAACGGGGTGAGGAGGTCAGAACTCCATTTCTaGGGGGTGTTTGGTTGGGCGCCAGACGGGCCATCGGCACCCGAG +
Preference number: 5 (lower is better)
Translates to: SVGGMNGVRRSELHF*GVFGWAPDGPSAPE
Trigger: CTCGGGTGCCGATGGCCCGTCTGGCGCCCAACCAAACACCCCGCAGAAATGGAGTTCTGACCTCCTCACCCCGTTCATGCCACCTACGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS-3UTR CAA 90 bp TCAATCACCCTCTCCAGGGGAGCGATCGCTCCTGAGGCTGCCAGCACCCCACCAAGCTTGTCCCGTGCCTaGACGATGGTGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: SITLSRGAIAPEAASTPPSLSRA*TMVPTM
Trigger: CATCGTGGGCACCATCGTCAAGGCACGGGACAAGCT...TGGTGGGGTGCTGGCAGCCTCAGGAGCGATCGCTCCCCTGGAGAGGGTGATTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CAA 90 bp CACGCGCGCCTTGGCGTGGCTCTCACAGTAGAGCCGCTCGTCCAGAAAGAAGTAAGCTTGTCCCGTGCCTaGACGATGGTGCCCCGCCCT +
Preference number: 5 (lower is better)
Translates to: HARLGVALTVEPLVQKEVSLSRA*TMVPRP
Trigger: AGGGCGGGGCACCATCGTCAAGGCACGGGACAAGCT...TACTTCTTTCTGGACGAGCGGCTCTACTGTGAGAGCCACGCCAAGGCGCGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS TCA 90 bp GGGCTGCCGTCCTGGATCTCAGGATCGATGTGGATCCTGTGTGCCTaGGCCTTGCTGTCATCAGGGGCACTGGGCCAGCTCCTACCCTCA +
Preference number: 5 (lower is better)
Translates to: GLPSWISGSMWILCA*ALLSSGALGQLLPS
Trigger: TGAGGGTAGGAGCTGGCCCAGTGCCCCTGATGACAGCAAGGCTCAGGCACACAGGATCCACATCGATCCTGAGATCCAGGACGGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS TCA 90 bp GTGCAGGTGAACCTGCATGCTGGCCCCTCTGCCCTGGGCTCACTCTaGGCCAGGCCAGGCCAGGCAGTGTCTGTACATACCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: VQVNLHAGPSALGSL*ARPGQAVSVHTWIS
Trigger: TGAGATCCAGGTATGTACAGACACTGCCTGGCCTGGCCTGGCTCAGAGTGAGCCCAGGGCAGAGGGGCCAGCATGCAGGTTCACCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463615.1
CDS GCA 90 bp CGTCCTGGATCTCAGGATCGATGTGGATCCTGTGTGCCTGAGCCTTaGTGTCATCAGGGGCACTGGGCCAGCTCCTACCCTCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: RPGSQDRCGSCVPEP*CHQGHWASSYPQAC
Trigger: GCAGGCCTGAGGGTAGGAGCTGGCCCAGTGCCCCTGATGACAGCAAGGCTCAGGCACACAGGATCCACATCGATCCTGAGATCCAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS-3UTR CAA 90 bp TCAATCACCCTCTCCAGGGGAGCGATCGCTCCTGAGGCTGCCAGCACCCCACCAATGGAGATCCCAGGCTaGGTCTGCCATCTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: SITLSRGAIAPEAASTPPMEIPG*VCHLLA
Trigger: GGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCAT...TGGTGGGGTGCTGGCAGCCTCAGGAGCGATCGCTCCCCTGGAGAGGGTGATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS GCA 90 bp TGTTGGGCTGCCGTCCTGGATCTCAGGATCGATGTGGATCCTGTGTaGCTGAGCCTTGCTGTCATCAGGGGCACTGGGCCAGCTCCTACC +
Preference number: 5 (lower is better)
Translates to: CWAAVLDLRIDVDPV*LSLAVIRGTGPAPT
Trigger: GGTAGGAGCTGGCCCAGTGCCCCTGATGACAGCAAGGCTCAGGCACACAGGATCCACATCGATCCTGAGATCCAGGACGGCAGCCCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS GCA 90 bp ACACATGCAGGGTGCTCATCTGGGCTGGCAGGGTGGCCTCGCTGCTaGCATTGTGAGGGACTGGAAAGCGAGGGGGTTGTCCATATGGAG +
Preference number: 5 (lower is better)
Translates to: THAGCSSGLAGWPRC*HCEGLESEGVVHME
Trigger: CTCCATATGGACAACCCCCTCGCTTTCCAGTCCCTCACAATGGCAGCAGCGAGGCCACCCTGCCAGCCCAGATGAGCACCCTGCATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000462597.1
ENST00000474421.1
ENST00000484620.1
CDS GCA 90 bp GAGACACATGCAGGGTGCTCATCTGGGCTGGCAGGGTGGCCTCGCTaGTGCCATTGTGAGGGACTGGAAAGCGAGGGGGTTGTCCATATG +
Preference number: 5 (lower is better)
Translates to: ETHAGCSSGLAGWPR*CHCEGLESEGVVHM
Trigger: CATATGGACAACCCCCTCGCTTTCCAGTCCCTCACAATGGCAGCAGCGAGGCCACCCTGCCAGCCCAGATGAGCACCCTGCATGTGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000462597.1
ENST00000474421.1
ENST00000484620.1
CDS CCA 90 bp CATGAGCTCTGTGCTCTCACCATTGATGGCCTGGATCAGGTCTCCTaGGCACAGGGCAGCCAATGCAGCCTTGCTGCCAGCATGGACCCG +
Preference number: 5 (lower is better)
Translates to: HELCALTIDGLDQVS*AQGSQCSLAASMDP
Trigger: CGGGTCCATGCTGGCAGCAAGGCTGCATTGGCTGCCCTGTGCCCAGGAGACCTGATCCAGGCCATCAATGGTGAGAGCACAGAGCTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000463615.1
CDS CCA 90 bp CATCTGGGCTGGCAGGGTGGCCTCGCTGCTGCCATTGTGAGGGACTaGAAAGCGAGGGGGTTGTCCATATGGAGATCCCAGGCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: HLGWQGGLAAAIVRD*KARGLSIWRSQAWS
Trigger: AGACCAAGCCTGGGATCTCCATATGGACAACCCCCTCGCTTTCCAGTCCCTCACAATGGCAGCAGCGAGGCCACCCTGCCAGCCCAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000462597.1
ENST00000474421.1
ENST00000484620.1
CDS-3UTR CAA 90 bp GCCGGGACTTCGAGGAGGGGTGGAATTGACTTAGAGACAGGAGGGAGCCTCTTGGCAGCCAATGCAGCCTaGCTGCCAGCATGGACCCGT +
Preference number: 5 (lower is better)
Translates to: AGTSRRGGIDLETGGSLLAANAA*LPAWTR
Trigger: ACGGGTCCATGCTGGCAGCAAGGCTGCATTGGCTGC...CAAGAGGCTCCCTCCTGTCTCTAAGTCAATTCCACCCCTCCTCGAAGTCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CAA 90 bp CCTGCTCACTACTGCACCCAGAGCCTAGGACATGCCTGGCACCTAAGCAGATACGCCGCCTGCTGGTTGTaGGGCTGCCGTCCTGGATCT +
Preference number: 5 (lower is better)
Translates to: PAHYCTQSLGHAWHLSRYAACWL*GCRPGS
Trigger: AGATCCAGGACGGCAGCCCAACAACCAGCAGGCGGC...GTATCTGCTTAGGTGCCAGGCATGTCCTAGGCTCTGGGTGCAGTAGTGAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CAA 90 bp GCTTCACGCGCGCCTTGGCGTGGCTCTCACAGTAGAGCCGCTCGTCCAGAAAGAATGGAGATCCCAGGCTaGGTCTGCCATCTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: ASRAPWRGSHSRAARPERMEIPG*VCHLLA
Trigger: GGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCAT...TCTTTCTGGACGAGCGGCTCTACTGTGAGAGCCACGCCAAGGCGCGCGTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CAA 90 bp CTCACCTTCGTATTACTAGAGCTGGCCCGTTGTGATTCAGGTCTGCCTTCCACCAAGGAGCCTGACTGCTaGGGCTCCGCGGCCACGGGC +
Preference number: 5 (lower is better)
Translates to: LTFVLLELARCDSGLPSTKEPDC*GSAATG
Trigger: GCCCGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCTT...GGTGGAAGGCAGACCTGAATCACAACGGGCCAGCTCTAGTAATACGAAGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CAA 90 bp CACGCGCGCCTTGGCGTGGCTCTCACAGTAGAGCCGCTCGTCCAGAAAGAAGTAAGTTCCACCTTGGCATaGGGGTACACCGCCACCACG +
Preference number: 5 (lower is better)
Translates to: HARLGVALTVEPLVQKEVSSTLA*GYTATT
Trigger: CGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACT...TACTTCTTTCTGGACGAGCGGCTCTACTGTGAGAGCCACGCCAAGGCGCGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CAA 90 bp GCGCGCCTTGGCGTGGCTCTCACAGTAGAGCCGCTCGTCCAGAAAGAAGTAACCCAGACGAGTTCCACCTaGGCATTGGGGTACACCGCC +
Preference number: 5 (lower is better)
Translates to: ARLGVALTVEPLVQKEVTQTSST*ALGYTA
Trigger: GGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTG...GGTTACTTCTTTCTGGACGAGCGGCTCTACTGTGAGAGCCACGCCAAGGCGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS GCA 90 bp ATACCTGGATCTCAGGATCGATGTGGATCCTGTGTGCCTGAGCCTTaGTGTCATCAGGGGCACTGGGCCAGCTCCTACCCTCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: IPGSQDRCGSCVPEP*CHQGHWASSYPQAC
Trigger: GCAGGCCTGAGGGTAGGAGCTGGCCCAGTGCCCCTGATGACAGCAAGGCTCAGGCACACAGGATCCACATCGATCCTGAGATCCAGGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463615.1
CDS CCA 90 bp GCTGCTGCCATTGTGAGGGACTGGAAAGCGAGGGGGTTGTCCATATaGAGATCCCAGGCTTGGTCTGCCATCTTCTGGCCCAGTCCCGGT +
Preference number: 5 (lower is better)
Translates to: AAAIVRDWKARGLSI*RSQAWSAIFWPSPG
Trigger: ACCGGGACTGGGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCATATGGACAACCCCCTCGCTTTCCAGTCCCTCACAATGGCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000474421.1
ENST00000484620.1
CDS CCA 90 bp CATGAGCTCTGTGCTCTCACCATTGATGGCCTGGATCAGGTCTCCTaGGCACAGGGCAGCCAATGCAGCCTTGCTGCCAGCATGGACCCA +
Preference number: 5 (lower is better)
Translates to: HELCALTIDGLDQVS*AQGSQCSLAASMDP
Trigger: TGGGTCCATGCTGGCAGCAAGGCTGCATTGGCTGCCCTGTGCCCAGGAGACCTGATCCAGGCCATCAATGGTGAGAGCACAGAGCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418373.1
CDS-3UTR CAA 90 bp GCAGGCGTGGGAGCAGGGTCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTTCTGTGCTCTCACCATaGATGGCCTGGATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: AGVGAGSQLRRVPPWHWGSVLSP*MAWIRS
Trigger: AGACCTGATCCAGGCCATCAATGGTGAGAGCACAGA...ACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGACCCTGCTCCCACGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS-3UTR CAA 90 bp AGGTCATACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTTGGAAAGCGAGGGGGTaGTCCATATGGAGATCCCAG +
Preference number: 5 (lower is better)
Translates to: RSYLLSSRRTQHPRPHLRWKARG*SIWRSQ
Trigger: CTGGGATCTCCATATGGACAACCCCCTCGCTTTCCA...ACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGTATGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CAA 90 bp AGACGATGTGTGCAGCCGGGGCATGAAAGGCCCAAGGCAAACACACCACGAGGTAGTTCCACCTTGGCATaGGGGTACACCGCCACCACG +
Preference number: 5 (lower is better)
Translates to: RRCVQPGHERPKANTPRGSSTLA*GYTATT
Trigger: CGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACT...ACCTCGTGGTGTGTTTGCCTTGGGCCTTTCATGCCCCGGCTGCACACATCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CAA 90 bp CCTGCTCACTACTGCACCCAGAGCCTAGGACATGCCTGGCACCTAAGCAGATACGCCCCCAGCTCACCTTaGCACACACAGTTCCCCCGT +
Preference number: 5 (lower is better)
Translates to: PAHYCTQSLGHAWHLSRYAPSSP*HTQFPR
Trigger: ACGGGGGAACTGTGTGTGCAAAGGTGAGCTGGGGGC...GTATCTGCTTAGGTGCCAGGCATGTCCTAGGCTCTGGGTGCAGTAGTGAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CAA 90 bp TCCCAGCTCAGACGAGTTCCACCTTGGCATTGGGGTACACCGCCACCACGTCGTTGGAAAGCGAGGGGGTaGTCCATATGGAGATCCCAG +
Preference number: 5 (lower is better)
Translates to: SQLRRVPPWHWGTPPPRRWKARG*SIWRSQ
Trigger: CTGGGATCTCCATATGGACAACCCCCTCGCTTTCCA...ACGACGTGGTGGCGGTGTACCCCAATGCCAAGGTGGAACTCGTCTGAGCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS TCA 90 bp TCTGTACATACCTGGATCTCAGGATCGATGTGGATCCTGTGTGCCTaGGCCTTGCTGTCATCAGGGGCACTGGGCCAGCTCCTACCCTCA +
Preference number: 5 (lower is better)
Translates to: SVHTWISGSMWILCA*ALLSSGALGQLLPS
Trigger: TGAGGGTAGGAGCTGGCCCAGTGCCCCTGATGACAGCAAGGCTCAGGCACACAGGATCCACATCGATCCTGAGATCCAGGTATGTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463615.1
CDS GCA 90 bp CACAGACAGTGTGAGGTGATCGTGGCAGCCCTTGATGCGGTTCTGTaGCTCCAGGTGTGTCATGAGCTCTGTGCTCTCACCATTGATGGC +
Preference number: 5 (lower is better)
Translates to: HRQCEVIVAALDAVL*LQVCHELCALTIDG
Trigger: GCCATCAATGGTGAGAGCACAGAGCTCATGACACACCTGGAGGCACAGAACCGCATCAAGGGCTGCCACGATCACCTCACACTGTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000463615.1
CDS GCA 90 bp AGTGTCTGTACATACCTGGATCTCAGGATCGATGTGGATCCTGTGTaGCTGAGCCTTGCTGTCATCAGGGGCACTGGGCCAGCTCCTACC +
Preference number: 5 (lower is better)
Translates to: SVCTYLDLRIDVDPV*LSLAVIRGTGPAPT
Trigger: GGTAGGAGCTGGCCCAGTGCCCCTGATGACAGCAAGGCTCAGGCACACAGGATCCACATCGATCCTGAGATCCAGGTATGTACAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463615.1
CDS-3UTR CAA 90 bp TTATTAGAGGGACAGGGTGAAACATATTTACACCGGCCGAGCAGGGACCTTAAGGCAGCCAATGCAGCCTaGCTGCCAGCATGGACCCGT +
Preference number: 5 (lower is better)
Translates to: LLEGQGETYLHRPSRDLKAANAA*LPAWTR
Trigger: ACGGGTCCATGCTGGCAGCAAGGCTGCATTGGCTGC...CTTAAGGTCCCTGCTCGGCCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000379018.7
CDS CCA 90 bp GAGACAGAGCCCACACCAGGTGCTCATCATCTGAGGAACATGGGATaGGGTATGGATGTGGTCCAGAGAAAACTTCTGCTTCAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: ETEPTPGAHHLRNMG*GMDVVQRKLLLQSL
Trigger: CAGAGACTGAAGCAGAAGTTTTCTCTGGACCACATCCATACCCCATCCCATGTTCCTCAGATGATGAGCACCTGGTGTGGGCTCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463615.1
CDS-3UTR CAA 90 bp AGGTCATACCTCCTGTCGTCGCGCCGCACGCAGCATCCCAGACCTCACCTTCGTTGCGATAGCACAAAATaGAAAACAGCACAAATGTAC +
Preference number: 5 (lower is better)
Translates to: RSYLLSSRRTQHPRPHLRCDSTK*KTAQMY
Trigger: GTACATTTGTGCTGTTTTCAATTTTGTGCTATCGCA...ACGAAGGTGAGGTCTGGGATGCTGCGTGCGGCGCGACGACAGGAGGTATGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS-3UTR CAA 90 bp TTATTAGAGGGACAGGGTGAAACATATTTACACCGGCCGAGCAGGGACCTTAAGTCTGTGCTCTCACCATaGATGGCCTGGATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LLEGQGETYLHRPSRDLKSVLSP*MAWIRS
Trigger: AGACCTGATCCAGGCCATCAATGGTGAGAGCACAGA...CTTAAGGTCCCTGCTCGGCCGGTGTAAATATGTTTCACCCTGTCCCTCTAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000379018.7
CDS CAA 90 bp CCCTGCAGGCCGCTCAGCGGAGCGCCCAGCTTGCTGGCCGTGGGCTaGAGGTTCCGGGGGCCGCCAGGCCCGGGCCAATCCCCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: PCRPLSGAPSLLAVG*RFRGPPGPGQSPPS
Trigger: CGAGGGCGGGGATTGGCCCGGGCCTGGCGGCCCCCGGAACCTCAAGCCCACGGCCAGCAAGCTGGGCGCTCCGCTGAGCGGCCTGCAGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS CAA 90 bp GTGCACTCGGGCAGCCCCTGCAGGCCGCTCAGCGGAGCGCCCAGCTaGCTGGCCGTGGGCTTGAGGTTCCGGGGGCCGCCAGGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: VHSGSPCRPLSGAPS*LAVGLRFRGPPGPG
Trigger: GCCCGGGCCTGGCGGCCCCCGGAACCTCAAGCCCACGGCCAGCAAGCTGGGCGCTCCGCTGAGCGGCCTGCAGGGGCTGCCCGAGTGCAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000462597.1
CDS GCA 72 bp ATGCCGTGGCCGCAGCGCGTGCACTCGGGCAGCCCCTaGAGGCCGCTCAGCGGAGCGCCCAGCTTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: MPWPQRVHSGSP*RPLSGAPSLLA
Trigger: GGCCAGCAAGCTGGGCGCTCCGCTGAGCGGCCTGCAGGGGCTGCCCGAGTGCACGCGCTGCGGCCACGGCAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000462597.1
CDS CAA 72 bp CCGCTCAGCGGAGCGCCCAGCTTGCTGGCCGTGGGCTaGAGGTTCCGGGGGCCGCCAGGCCCGGGCCAATCC +
Preference number: 6 (lower is better)
Translates to: PLSGAPSLLAVG*RFRGPPGPGQS
Trigger: GGATTGGCCCGGGCCTGGCGGCCCCCGGAACCTCAAGCCCACGGCCAGCAAGCTGGGCGCTCCGCTGAGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000462597.1
ENST00000474421.1
CDS CAA 90 bp CCCTGCAGGCCGCTCAGCGGAGCGCCCAGCTTGCTGGCCGTGGGCTaGAGGTTCCGGGGGCCGCCAGGCCCGGGCCAATCCCCTGAAACC +
Preference number: 6 (lower is better)
Translates to: PCRPLSGAPSLLAVG*RFRGPPGPGQSPET
Trigger: GGTTTCAGGGGATTGGCCCGGGCCTGGCGGCCCCCGGAACCTCAAGCCCACGGCCAGCAAGCTGGGCGCTCCGCTGAGCGGCCTGCAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS CCA 72 bp GCATGCCCTGCAAGTAGCGGAAGGAGCCTGACTGCTTaGGCTCCGCGGCCACGGGCTCGGCTGGCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: ACPASSGRSLTA*APRPRARLAPA
Trigger: TGCGGGAGCCAGCCGAGCCCGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCGCTACTTGCAGGGCATGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000462597.1
ENST00000474421.1
ENST00000484620.1
CDS TCA 72 bp GCTTGGTCTGCCATCTTCTGGCCCAGTCCCGGTGCCTaGGGGCCGCCTGCTGGTTGTTGGGCTGCCGTCCCG +
Preference number: 6 (lower is better)
Translates to: AWSAIFWPSPGA*GPPAGCWAAVP
Trigger: CGGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474421.1
CDS GCA 72 bp GCAGCATCCTGTACACCTCGGAGCCCAGGTCGACTCTaGAGTCCCGGCTCCGCGGGAGGCCTCTGGCTGGGT +
Preference number: 6 (lower is better)
Translates to: AASCTPRSPGRL*SPGSAGGLWLG
Trigger: ACCCAGCCAGAGGCCTCCCGCGGAGCCGGGACTGCAGAGTCGACCTGGGCTCCGAGGTGTACAGGATGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000462597.1
ENST00000474421.1
ENST00000484620.1
CDS GCA 72 bp GCCCGGGCCAATCCCCGCCCTCGCCGGCCTCTAGCATaGCCTGCAAGTAGCGGAAGGAGCCTGACTGCTTGG +
Preference number: 6 (lower is better)
Translates to: ARANPRPRRPLA*PASSGRSLTAW
Trigger: CCAAGCAGTCAGGCTCCTTCCGCTACTTGCAGGGCATGCTAGAGGCCGGCGAGGGCGGGGATTGGCCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253754.8
ENST00000484620.1
CDS TCA 72 bp GCTTGGTCTGCCATCTTCTGGCCCAGTCCCGGTGCCTaGGGGCCGCCTGCTGGTTGTTGGGCTGCCGTCCTG +
Preference number: 6 (lower is better)
Translates to: AWSAIFWPSPGA*GPPAGCWAAVL
Trigger: CAGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS GCA 72 bp CCAGGCTTGGTCTGCCATCTTCTGGCCCAGTCCCGGTaGCTGAGGGCCGCCTGCTGGTTGTTGGGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: PGLVCHLLAQSR*LRAACWLLGCR
Trigger: ACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000474421.1
ENST00000484620.1
CDS CCA 72 bp GGCACTGCAGGGAGTGGGAAGGCAGATGGGGACAGGTaGCAGGCGTCTTACCGCCCTCGCCGGCCTCTAGCA +
Preference number: 6 (lower is better)
Translates to: GTAGSGKADGDR*QASYRPRRPLA
Trigger: TGCTAGAGGCCGGCGAGGGCGGTAAGACGCCTGCCACCTGTCCCCATCTGCCTTCCCACTCCCTGCAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS TCA 72 bp GCTTGGTCTGCCATCTTCTGGCCCAGTCCCGGTGCCTaGGGGCCGCCTGCTGGTTGTTGGGCTGCCGTCCTT +
Preference number: 6 (lower is better)
Translates to: AWSAIFWPSPGA*GPPAGCWAAVL
Trigger: AAGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484620.1
CDS CCA 72 bp CTTCTGGCCCAGTCCCGGTGCCTGAGGGCCGCCTGCTaGTTGTTGGGCTGCCGTCCTGGATCTCAGGATCGA +
Preference number: 6 (lower is better)
Translates to: LLAQSRCLRAAC*LLGCRPGSQDR
Trigger: TCGATCCTGAGATCCAGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS CAA 72 bp CTGGCCCAGTCCCGGTGCCTGAGGGCCGCCTGCTGGTaGTTGGGCTGCCGTCCTGGATCTCAGGATCGATGT +
Preference number: 6 (lower is better)
Translates to: LAQSRCLRAACW*LGCRPGSQDRC
Trigger: ACATCGATCCTGAGATCCAGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS GCA 72 bp CATCTTCTGGCCCAGTCCCGGTGCCTGAGGGCCGCCTaGTGGTTGTTGGGCTGCCGTCCTGGATCTCAGGAT +
Preference number: 6 (lower is better)
Translates to: HLLAQSRCLRAA*WLLGCRPGSQD
Trigger: ATCCTGAGATCCAGGACGGCAGCCCAACAACCAGCAGGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS GCA 72 bp GGGTGCTCATCTGGGCTGGCAGGGTGGCCTCGCTGCTaGCATTGTGAGGGACTGGAAAGCGAGGGGGTTGTC +
Preference number: 6 (lower is better)
Translates to: GCSSGLAGWPRC*HCEGLESEGVV
Trigger: GACAACCCCCTCGCTTTCCAGTCCCTCACAATGGCAGCAGCGAGGCCACCCTGCCAGCCCAGATGAGCACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000462597.1
ENST00000474421.1
ENST00000484620.1
CDS GCA 72 bp GCAGGGTGCTCATCTGGGCTGGCAGGGTGGCCTCGCTaGTGCCATTGTGAGGGACTGGAAAGCGAGGGGGTT +
Preference number: 6 (lower is better)
Translates to: AGCSSGLAGWPR*CHCEGLESEGV
Trigger: AACCCCCTCGCTTTCCAGTCCCTCACAATGGCAGCAGCGAGGCCACCCTGCCAGCCCAGATGAGCACCCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000462597.1
ENST00000474421.1
ENST00000484620.1
CDS GCA 72 bp TTGACGATGGTGCCCCGCCCTCGCCGGCCTCTAGCATaGCCTGCAAGTAGCGGAAGGAGCCTGACTGCTTGG +
Preference number: 6 (lower is better)
Translates to: LTMVPRPRRPLA*PASSGRSLTAW
Trigger: CCAAGCAGTCAGGCTCCTTCCGCTACTTGCAGGGCATGCTAGAGGCCGGCGAGGGCGGGGCACCATCGTCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS GCA 72 bp GCACATGAAGCACTCGGGATGGTAGAGCTTGTCCCGTaGCTTGACGATGGTGCCCCGCCCTCGCCGGCCTCT +
Preference number: 6 (lower is better)
Translates to: AHEALGMVELVP*LDDGAPPSPAS
Trigger: AGAGGCCGGCGAGGGCGGGGCACCATCGTCAAGGCACGGGACAAGCTCTACCATCCCGAGTGCTTCATGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379018.7
CDS GCA 72 bp TGGCAGGCGTCTTACCGCCCTCGCCGGCCTCTAGCATaGCCTGCAAGTAGCGGAAGGAGCCTGACTGCTTGG +
Preference number: 6 (lower is better)
Translates to: WQASYRPRRPLA*PASSGRSLTAW
Trigger: CCAAGCAGTCAGGCTCCTTCCGCTACTTGCAGGGCATGCTAGAGGCCGGCGAGGGCGGTAAGACGCCTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS CAA 90 bp GAGGGACTGGAAAGCGAGGGGGTTGTCCATATGGAGATCCCAGGCTaGGTCTGCCATCTTCTGGCCCAGTCCCGGTGCCTGAGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: EGLESEGVVHMEIPG*VCHLLAQSRCLRAA
Trigger: GGCGGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCATATGGACAACCCCCTCGCTTTCCAGTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000474421.1
ENST00000484620.1
CDS GCA 72 bp GAGGGGGTTGTCCATATGGAGATCCCAGGCTTGGTCTaGCATCTTCTGGCCCAGTCCCGGTGCCTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: EGVVHMEIPGLV*HLLAQSRCLRA
Trigger: GGCCCTCAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCATATGGACAACCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000474421.1
ENST00000484620.1
CDS CCA 72 bp AGGAGGTCAGAACTCCATTTCTGCGGGGTGTTTGGTTaGGCGCCAGACGGGCCATCGGCACCCGAGACTGGG +
Preference number: 6 (lower is better)
Translates to: RRSELHFCGVFG*APDGPSAPETG
Trigger: CCCAGTCTCGGGTGCCGATGGCCCGTCTGGCGCCCAACCAAACACCCCGCAGAAATGGAGTTCTGACCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS CCA 72 bp GGTGAGGAGGTCAGAACTCCATTTCTGCGGGGTGTTTaGTTGGGCGCCAGACGGGCCATCGGCACCCGAGAC +
Preference number: 6 (lower is better)
Translates to: GEEVRTPFLRGV*LGARRAIGTRD
Trigger: GTCTCGGGTGCCGATGGCCCGTCTGGCGCCCAACCAAACACCCCGCAGAAATGGAGTTCTGACCTCCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS CAA 72 bp GAGGAGGTCAGAACTCCATTTCTGCGGGGTGTTTGGTaGGGCGCCAGACGGGCCATCGGCACCCGAGACTGG +
Preference number: 6 (lower is better)
Translates to: EEVRTPFLRGVW*GARRAIGTRDW
Trigger: CCAGTCTCGGGTGCCGATGGCCCGTCTGGCGCCCAACCAAACACCCCGCAGAAATGGAGTTCTGACCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS GCA 72 bp GCACATGAAGCACTCGGGATGGTAGAGCTTGTCCCGTaGCTTGACGATGGTGCCCACGATGCCGTGGCCGCA +
Preference number: 6 (lower is better)
Translates to: AHEALGMVELVP*LDDGAHDAVAA
Trigger: TGCGGCCACGGCATCGTGGGCACCATCGTCAAGGCACGGGACAAGCTCTACCATCCCGAGTGCTTCATGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253754.8
CDS GCA 72 bp GGCATGAACGGGGTGAGGAGGTCAGAACTCCATTTCTaGGGGGTGTTTGGTTGGGCGCCAGACGGGCCATCG +
Preference number: 6 (lower is better)
Translates to: GMNGVRRSELHF*GVFGWAPDGPS
Trigger: CGATGGCCCGTCTGGCGCCCAACCAAACACCCCGCAGAAATGGAGTTCTGACCTCCTCACCCCGTTCATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462597.1
ENST00000474421.1
CDS CCA 72 bp GAGACACATGCAGGGTGCTCATCTGGGCTGGCAGGGTaGCCTCGCTGCTGCCATTGTGAGGGACTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: ETHAGCSSGLAG*PRCCHCEGLES
Trigger: GCTTTCCAGTCCCTCACAATGGCAGCAGCGAGGCCACCCTGCCAGCCCAGATGAGCACCCTGCATGTGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000462597.1
ENST00000474421.1
ENST00000484620.1
CDS CAA 90 bp GGTGGCCTCGCTGCTGCCATTGTGAGGGACTGGAAAGCGAGGGGGTaGTCCATATGGAGATCCCAGGCTTGGTCTGCCATCTTCTGGCCC +
Preference number: 6 (lower is better)
Translates to: GGLAAAIVRDWKARG*SIWRSQAWSAIFWP
Trigger: GGGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCATATGGACAACCCCCTCGCTTTCCAGTCCCTCACAATGGCAGCAGCGAGGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000474421.1
ENST00000484620.1
CDS TCA 72 bp CTCCTACCCTCAGGCCTGCTCACAGACAGTGTGAGGTaGTCGTGGCAGCCCTTGATGCGGTTCTGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: LLPSGLLTDSVR*SWQPLMRFCAS
Trigger: GGAGGCACAGAACCGCATCAAGGGCTGCCACGATCACCTCACACTGTCTGTGAGCAGGCCTGAGGGTAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000463615.1
CDS TCA 72 bp GTATCTGAGAGCCCCAGTGAGGACATTCAGTGCAGGTaGACCTGCATGCTGGCCCCTCTGCCCTGGGCTCAC +
Preference number: 6 (lower is better)
Translates to: VSESPSEDIQCR*TCMLAPLPWAH
Trigger: GTGAGCCCAGGGCAGAGGGGCCAGCATGCAGGTTCACCTGCACTGAATGTCCTCACTGGGGCTCTCAGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463615.1
CDS GCA 72 bp GCCGTCCTGGATCTCAGGATCGATGTGGATCCTGTGTaGCTGAGCCTTGCTGTCATCAGGGGCACTGGGCCA +
Preference number: 6 (lower is better)
Translates to: AVLDLRIDVDPV*LSLAVIRGTGP
Trigger: TGGCCCAGTGCCCCTGATGACAGCAAGGCTCAGGCACACAGGATCCACATCGATCCTGAGATCCAGGACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS CCA 72 bp TGTGCTCTCACCATTGATGGCCTGGATCAGGTCTCCTaGGCACAGGGCAGCCAATGCAGCCTTGCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: CALTIDGLDQVS*AQGSQCSLAAS
Trigger: GCTGGCAGCAAGGCTGCATTGGCTGCCCTGTGCCCAGGAGACCTGATCCAGGCCATCAATGGTGAGAGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000463615.1
CDS CCA 72 bp TGGCAGGGTGGCCTCGCTGCTGCCATTGTGAGGGACTaGAAAGCGAGGGGGTTGTCCATATGGAGATCCCAG +
Preference number: 6 (lower is better)
Translates to: WQGGLAAAIVRD*KARGLSIWRSQ
Trigger: CTGGGATCTCCATATGGACAACCCCCTCGCTTTCCAGTCCCTCACAATGGCAGCAGCGAGGCCACCCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000462597.1
ENST00000474421.1
ENST00000484620.1
CDS CCA 72 bp TTCTGGGCATGGCACCGAAGGCATCTCTGTGCTACCTaGGGGGTGGAGACACATGCAGGGTGCTCATCTGGG +
Preference number: 6 (lower is better)
Translates to: FWAWHRRHLCAT*GVETHAGCSSG
Trigger: CCCAGATGAGCACCCTGCATGTGTCTCCACCCCCCAGGTAGCACAGAGATGCCTTCGGTGCCATGCCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474421.1
CDS CAA 72 bp GAAAGCGAGGGGGTTGTCCATATGGAGATCCCAGGCTaGGTCTGCCATCTTCTGGCCCAGTCCCGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: ESEGVVHMEIPG*VCHLLAQSRCL
Trigger: CAGGCACCGGGACTGGGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCATATGGACAACCCCCTCGCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000474421.1
ENST00000484620.1
CDS TCA 72 bp TCCTGGATCTCAGGATCGATGTGGATCCTGTGTGCCTaGGCCTTGCTGTCATCAGGGGCACTGGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: SWISGSMWILCA*ALLSSGALGQL
Trigger: GAGCTGGCCCAGTGCCCCTGATGACAGCAAGGCTCAGGCACACAGGATCCACATCGATCCTGAGATCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
CDS TCA 72 bp ACCTGGATCTCAGGATCGATGTGGATCCTGTGTGCCTaGGCCTTGCTGTCATCAGGGGCACTGGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: TWISGSMWILCA*ALLSSGALGQL
Trigger: GAGCTGGCCCAGTGCCCCTGATGACAGCAAGGCTCAGGCACACAGGATCCACATCGATCCTGAGATCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463615.1
CDS GCA 72 bp TCTCAGGATCGATGTGGATCCTGTGTGCCTGAGCCTTaGTGTCATCAGGGGCACTGGGCCAGCTCCTACCCT +
Preference number: 6 (lower is better)
Translates to: SQDRCGSCVPEP*CHQGHWASSYP
Trigger: AGGGTAGGAGCTGGCCCAGTGCCCCTGATGACAGCAAGGCTCAGGCACACAGGATCCACATCGATCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000463615.1
CDS CAA 72 bp GCCTCCAGGTGTGTCATGAGCTCTGTGCTCTCACCATaGATGGCCTGGATCAGGTCTCCTGGGCACAGGGCA +
Preference number: 6 (lower is better)
Translates to: ASRCVMSSVLSP*MAWIRSPGHRA
Trigger: TGCCCTGTGCCCAGGAGACCTGATCCAGGCCATCAATGGTGAGAGCACAGAGCTCATGACACACCTGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000463615.1
CDS CCA 72 bp GCTGGTTGTTGGGCTGCCGTCCTTCCTGAACTGTGGTaGGTACTGGGTAGGCCCATGGCTGGGAACTCAAAA +
Preference number: 6 (lower is better)
Translates to: AGCWAAVLPELW*VLGRPMAGNSK
Trigger: TTTTGAGTTCCCAGCCATGGGCCTACCCAGTACCCACCACAGTTCAGGAAGGACGGCAGCCCAACAACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484620.1
CDS CAA 72 bp GCTGCTGCCATTGTGAGGGACTGGAAAGCGAGGGGGTaGTCCATATGGAGATCCCAGGCTTGGTCTGCCATC +
Preference number: 6 (lower is better)
Translates to: AAAIVRDWKARG*SIWRSQAWSAI
Trigger: GATGGCAGACCAAGCCTGGGATCTCCATATGGACAACCCCCTCGCTTTCCAGTCCCTCACAATGGCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000474421.1
ENST00000484620.1
CDS GCA 72 bp ACATACCTGGATCTCAGGATCGATGTGGATCCTGTGTaGCTGAGCCTTGCTGTCATCAGGGGCACTGGGCCA +
Preference number: 6 (lower is better)
Translates to: TYLDLRIDVDPV*LSLAVIRGTGP
Trigger: TGGCCCAGTGCCCCTGATGACAGCAAGGCTCAGGCACACAGGATCCACATCGATCCTGAGATCCAGGTATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463615.1
CDS CCA 72 bp ATTGTGAGGGACTGGAAAGCGAGGGGGTTGTCCATATaGAGATCCCAGGCTTGGTCTGCCATCTTCTGGCCC +
Preference number: 6 (lower is better)
Translates to: IVRDWKARGLSI*RSQAWSAIFWP
Trigger: GGGCCAGAAGATGGCAGACCAAGCCTGGGATCTCCATATGGACAACCCCCTCGCTTTCCAGTCCCTCACAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253754.8
ENST00000379018.7
ENST00000418373.1
ENST00000474421.1
ENST00000484620.1
CDS TCA 72 bp CAAGGATCAAGTGTCAGGGGTCAGAGTGGGACTGGGTaGGATTTGAGGGATCAAGGGTTAAGATGGGTTCTG +
Preference number: 6 (lower is better)
Translates to: QGSSVRGQSGTG*DLRDQGLRWVL
Trigger: CAGAACCCATCTTAACCCTTGATCCCTCAAATCTCACCCAGTCCCACTCTGACCCCTGACACTTGATCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474421.1
CDS GCA 72 bp GTGGACTTGGGGTCTGGTAAGGCTTATGAGTCAGAATaGAACCAGCTAAGACCCAAGGATCAAGTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: VDLGSGKAYESE*NQLRPKDQVSG
Trigger: CCCTGACACTTGATCCTTGGGTCTTAGCTGGTTGCATTCTGACTCATAAGCCTTACCAGACCCCAAGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474421.1