RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000067992

Ensembl transcript IDs: ENST00000379162.9, ENST00000568479.2, ENST00000648777.1

Found 582 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGAGACGGAGGGCTCTGGGACTAAATCATCAGGGCATGGCCACCTaGTGTCTTCCACTTTCAGGGTCCCAGGGCCCTAGGTGGAGGTTT +
Preference number: 1 (lower is better)
Translates to: ERRRALGLNHQGMAT*CLPLSGSQGPRWRF
Trigger: AAACCTCCACCTAGGGCCCTGGGACCCTGAAAGTGGAAGACATCAGGTGGCCATGCCCTGATGATTTAGTCCCAGAGCCCTCCGTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR GCA 90 bp TGGCAAAACAGGACTGGCAACAGTCGGGAGAAGCTGGGCACACTCTaGGCGTGCATGTTTCCAGAAAAACGAGGACAGGCGGTTGAGATC +
Preference number: 1 (lower is better)
Translates to: WQNRTGNSREKLGTL*ACMFPEKRGQAVEI
Trigger: GATCTCAACCGCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCCCGACTGTTGCCAGTCCTGTTTTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp AATGGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTCTATaGAAGGCACTCACAGACAACATGTTCCAAGGAGGCTTCGTGTCA +
Preference number: 1 (lower is better)
Translates to: NGTRPPPGQRIQQCL*KALTDNMFQGGFVS
Trigger: TGACACGAAGCCTCCTTGGAACATGTTGTCTGTGAGTGCCTTCCATAGACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp ACGACTAGTGGGAATGGGGAAATGCAAAGAGGATCTGTCTCCCAATaGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTCTATG +
Preference number: 1 (lower is better)
Translates to: TTSGNGEMQRGSVSQ*DPATPRAEDSTVSM
Trigger: CATAGACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATCCTCTTTGCATTTCCCCATTCCCACTAGTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 90 bp AACAGGACTGGCAACAGTCGGGAGAAGCTGGGCACACTCTGCGCGTaGATGTTTCCAGAAAAACGAGGACAGGCGGTTGAGATCTCAGAT +
Preference number: 1 (lower is better)
Translates to: NRTGNSREKLGTLCA*MFPEKRGQAVEISD
Trigger: ATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCCCGACTGTTGCCAGTCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 90 bp TTCCCCATTGGTCAGCAAGACAATGAACTGAAATGGGCTCCCATCTaGTCTGTCTACCTGAAGCCACAGTGTGGGGACCTCGACAGGGTC +
Preference number: 1 (lower is better)
Translates to: FPIGQQDNELKWAPI*SVYLKPQCGDLDRV
Trigger: GACCCTGTCGAGGTCCCCACACTGTGGCTTCAGGTAGACAGAGCAGATGGGAGCCCATTTCAGTTCATTGTCTTGCTGACCAATGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp TGGAACAGCCCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATaGGCTTCCTATGACCCACCTCTCACCAGTCTCTCAGAAGTACAT +
Preference number: 1 (lower is better)
Translates to: WNSPIPKTLTRSSDL*ASYDPPLTSLSEVH
Trigger: ATGTACTTCTGAGAGACTGGTGAGAGGTGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGGGCTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR TCA 90 bp GCCTCCTCTCACCTGACCACAGTTCCCCATTGGTCAGCAAGACAATaGACTGAAATGGGCTCCCATCTGCTCTGTCTACCTGAAGCCACA +
Preference number: 1 (lower is better)
Translates to: ASSHLTTVPHWSARQ*TEMGSHLLCLPEAT
Trigger: TGTGGCTTCAGGTAGACAGAGCAGATGGGAGCCCATTTCAGTTCATTGTCTTGCTGACCAATGGGGAACTGTGGTCAGGTGAGAGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 90 bp TTCAAGTCTCCATTTCACACCAGGACAGACATTAGGGAAAGGCACTaGCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTG +
Preference number: 1 (lower is better)
Translates to: FKSPFHTRTDIRERH*PGWSLVHTARLSLV
Trigger: CACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTGAAATGGAGACTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 90 bp CGATGGAGGACTAAAGGTAGCTTTCCTTCACATGACTCCTCTCTCTaGCACCCTCCCTTCGTTAACCTCTCTTACATGTGGGTACCGGTC +
Preference number: 1 (lower is better)
Translates to: RWRTKGSFPSHDSSL*HPPFVNLSYMWVPV
Trigger: GACCGGTACCCACATGTAAGAGAGGTTAACGAAGGGAGGGTGGCAGAGAGAGGAGTCATGTGAAGGAAAGCTACCTTTAGTCCTCCATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp AGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTaGGCTACATGGAATCCAGGAGGGCAGAAGTACAAACCCACCATG +
Preference number: 1 (lower is better)
Translates to: RTRGEKPTLEPISQM*ATWNPGGQKYKPTM
Trigger: CATGGTGGGTTTGTACTTCTGCCCTCCTGGATTCCATGTAGCCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp CCATTTCACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTaGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCCTTTAT +
Preference number: 1 (lower is better)
Translates to: PFHTRTDIRERHCPG*SLVHTARLSLVLLY
Trigger: ATAAAGGAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTGAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 90 bp CTGAAGGTGACGAAAGCTTGCTGCCGGATGTCTGGTGGGATGTGCTaGCCACTGAGGCAAAGAGGCTTCAATTCTACAAACAGGCCAAAT +
Preference number: 1 (lower is better)
Translates to: LKVTKACCRMSGGMC*PLRQRGFNSTNRPN
Trigger: ATTTGGCCTGTTTGTAGAATTGAAGCCTCTTTGCCTCAGTGGTCAGCACATCCCACCAGACATCCGGCAGCAAGCTTTCGTCACCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 90 bp ACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTaGTCTTCGGTGACAGGCATCAATCACACCACAGCAAGATGTCAT +
Preference number: 1 (lower is better)
Translates to: TRWRVRGHKSCKEAL*SSVTGINHTTARCH
Trigger: ATGACATCTTGCTGTGGTGTGATTGATGCCTGTCACCGAAGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR CCA 90 bp GACTCCTCTCTCTGCCACCCTCCCTTCGTTAACCTCTCTTACATGTaGGTACCGGTCTTCAAGTCTCCATTTCACACCAGGACAGACATT +
Preference number: 1 (lower is better)
Translates to: DSSLCHPPFVNLSYM*VPVFKSPFHTRTDI
Trigger: AATGTCTGTCCTGGTGTGAAATGGAGACTTGAAGACCGGTACCCACATGTAAGAGAGGTTAACGAAGGGAGGGTGGCAGAGAGAGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 90 bp CATCCCCAAGACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATaGCCCACCTCTCACCAGTCTCTCAGAAGTACATCAGTATTTCTT +
Preference number: 1 (lower is better)
Translates to: HPQDTDSVLRPMGFL*PTSHQSLRSTSVFL
Trigger: AAGAAATACTGATGTACTTCTGAGAGACTGGTGAGAGGTGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR CCA 90 bp TCAGCACAGTTTCTAGCACGCTGGAGACACTGGACAGTATTGCGATaGAGGACTAAAGGTAGCTTTCCTTCACATGACTCCTCTCTCTGC +
Preference number: 1 (lower is better)
Translates to: SAQFLARWRHWTVLR*RTKGSFPSHDSSLC
Trigger: GCAGAGAGAGGAGTCATGTGAAGGAAAGCTACCTTTAGTCCTCCATCGCAATACTGTCCAGTGTCTCCAGCGTGCTAGAAACTGTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp CCATGTGCCCAGCATTCAGCACAGTTTCTAGCACGCTGGAGACACTaGACAGTATTGCGATGGAGGACTAAAGGTAGCTTTCCTTCACAT +
Preference number: 1 (lower is better)
Translates to: PCAQHSAQFLARWRH*TVLRWRTKGSFPSH
Trigger: ATGTGAAGGAAAGCTACCTTTAGTCCTCCATCGCAATACTGTCCAGTGTCTCCAGCGTGCTAGAAACTGTGCTGAATGCTGGGCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 90 bp TATCCATATTCGGCCCCTTACATGGTACTGCTTGTGAGGATGTGGTaGTCGATGGGCCTTCCTCAAACAAGAGAAACGCTGTCAGAGTCA +
Preference number: 1 (lower is better)
Translates to: YPYSAPYMVLLVRMW*SMGLPQTRETLSES
Trigger: TGACTCTGACAGCGTTTCTCTTGTTTGAGGAAGGCCCATCGATCACCACATCCTCACAAGCAGTACCATGTAAGGGGCCGAATATGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR TCA 90 bp ATTGGGGTACAGAATTGTCCATGTGCTCCAGGACTAGTTGGGCTATaGCAGACACCACAGATTGCTCTGCAACTTCCGGGGAACATTATC +
Preference number: 1 (lower is better)
Translates to: IGVQNCPCAPGLVGL*QTPQIALQLPGNII
Trigger: GATAATGTTCCCCGGAAGTTGCAGAGCAATCTGTGGTGTCTGTCATAGCCCAACTAGTCCTGGAGCACATGGACAATTCTGTACCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 90 bp GATAATACAAATCACCTGGCGTACTGTTCCAAGCACCCAAGTGCTTaGTTTGGCCCTTCCATTGACTTACCATGCCACCTTGGCAAACTC +
Preference number: 1 (lower is better)
Translates to: DNTNHLAYCSKHPSA*FGPSIDLPCHLGKL
Trigger: GAGTTTGCCAAGGTGGCATGGTAAGTCAATGGAAGGGCCAAAGCAAGCACTTGGGTGCTTGGAACAGTACGCCAGGTGATTTGTATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 90 bp TCTGACAGATACAACCAAGTTGGGGATGAATCGAAGAAGAGTTCTTaGATTTGCCAGGCATTTCTCCGAGTCTCCAGCAGCCACAACTGC +
Preference number: 1 (lower is better)
Translates to: SDRYNQVGDESKKSS*ICQAFLRVSSSHNC
Trigger: GCAGTTGTGGCTGCTGGAGACTCGGAGAAATGCCTGGCAAATGCAAGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 90 bp GGAAACAGCAGCCCACACTATTCAATGAAGTCTGATTGTAAAAGCTaGCTCCTCTCACCTGACCACAGTTCCCCATTGGTCAGCAAGACA +
Preference number: 1 (lower is better)
Translates to: GNSSPHYSMKSDCKS*LLSPDHSSPLVSKT
Trigger: TGTCTTGCTGACCAATGGGGAACTGTGGTCAGGTGAGAGGAGGCAGCTTTTACAATCAGACTTCATTGAATAGTGTGGGCTGCTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp TCTGATTATTGGGGTACAGAATTGTCCATGTGCTCCAGGACTAGTTaGGCTATGACAGACACCACAGATTGCTCTGCAACTTCCGGGGAA +
Preference number: 1 (lower is better)
Translates to: SDYWGTELSMCSRTS*AMTDTTDCSATSGE
Trigger: TTCCCCGGAAGTTGCAGAGCAATCTGTGGTGTCTGTCATAGCCCAACTAGTCCTGGAGCACATGGACAATTCTGTACCCCAATAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 90 bp GAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTTCGGTaGCAGGCATCAATCACACCACAGCAAGATGTCATTAAAAAGTTA +
Preference number: 1 (lower is better)
Translates to: EYEGTRAVRRLCALR*QASITPQQDVIKKL
Trigger: TAACTTTTTAATGACATCTTGCTGTGGTGTGATTGATGCCTGTCACCGAAGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR TCA 90 bp CTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCTTGTaGGGATGTGGTGATCGATGGGCCTTCCTCAAACAAGAGAAACGC +
Preference number: 1 (lower is better)
Translates to: LHHIIHIRPLTWYCL*GCGDRWAFLKQEKR
Trigger: GCGTTTCTCTTGTTTGAGGAAGGCCCATCGATCACCACATCCTCACAAGCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR CCA 90 bp AGAATCCTGGAAGGACTGAAGACATCAGATGCTATGATAACAAGATaGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCT +
Preference number: 1 (lower is better)
Translates to: RILEGLKTSDAMITR*RVRGHKSCKEALCS
Trigger: AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTTCAGTCCTTCCAGGATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR TCA 90 bp GCCACAACTGCTGGGCAGTTAATGAGAAGATTCCCAAGACTCTACTaGTCATTTGTTAACTTGGCAAAACAGGACTGGCAACAGTCGGGA +
Preference number: 1 (lower is better)
Translates to: ATTAGQLMRRFPRLY*SFVNLAKQDWQQSG
Trigger: TCCCGACTGTTGCCAGTCCTGTTTTGCCAAGTTAACAAATGATCAGTAGAGTCTTGGGAATCTTCTCATTAACTGCCCAGCAGTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 90 bp CCCCACGGTGGTGGGAGAGGAGCTAATTGCATCGGTACTATCATATaGCTAAAGCAGGATGAATGGTTTACAAGTCAGAACTTCTACATC +
Preference number: 1 (lower is better)
Translates to: PHGGGRGANCIGTII*LKQDEWFTSQNFYI
Trigger: GATGTAGAAGTTCTGACTTGTAAACCATTCATCCTGCTTTAGTCATATGATAGTACCGATGCAATTAGCTCCTCTCCCACCACCGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR GCA 90 bp TCCAAGCACCCAAGTGCTTGCTTTGGCCCTTCCATTGACTTACCATaGCACCTTGGCAAACTCCTTAATTGCTTTGGGATTCATACAAAA +
Preference number: 1 (lower is better)
Translates to: SKHPSACFGPSIDLP*HLGKLLNCFGIHTK
Trigger: TTTTGTATGAATCCCAAAGCAATTAAGGAGTTTGCCAAGGTGGCATGGTAAGTCAATGGAAGGGCCAAAGCAAGCACTTGGGTGCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 90 bp TCTTGTCTCATCTTAACCATTGCTACATGTACAGTTCAGTGGCATTaGGTACATTCACGCTGTTGTGCAAGCATCACCACCATCCATCTC +
Preference number: 1 (lower is better)
Translates to: SCLILTIATCTVQWH*VHSRCCASITTIHL
Trigger: GAGATGGATGGTGGTGATGCTTGCACAACAGCGTGAATGTACTCAATGCCACTGAACTGTACATGTAGCAATGGTTAAGATGAGACAAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR GCA 90 bp CCCAGGATCTACCTACAAATGCACTTTCAAAACATTAACTCAGTGTaGTTTGGTGGTGGGCTCCAGGTCTCCAAACCATGTGAATATGTA +
Preference number: 1 (lower is better)
Translates to: PRIYLQMHFQNINSV*FGGGLQVSKPCEYV
Trigger: TACATATTCACATGGTTTGGAGACCTGGAGCCCACCACCAAAGCACACTGAGTTAATGTTTTGAAAGTGCATTTGTAGGTAGATCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp CTAAGGAACGCACCTGTCCATGATGAAAACAACATTGAGAAGATCTaGTGCTATCTTCTGCATCTCCCTTTCTGGCTGGATTTTTCTCCA +
Preference number: 1 (lower is better)
Translates to: LRNAPVHDENNIEKI*CYLLHLPFWLDFSP
Trigger: TGGAGAAAAATCCAGCCAGAAAGGGAGATGCAGAAGATAGCACCAGATCTTCTCAATGTTGTTTTCATCATGGACAGGTGCGTTCCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp ACTAACAAATCTGAACACACTGTAATAGAGTTCCAGAGATCTCCATaGGATTCTTATCAAAGGCTATTCCCTGAGACAGGCGGGGGTAGT +
Preference number: 1 (lower is better)
Translates to: TNKSEHTVIEFQRSP*DSYQRLFPETGGGS
Trigger: ACTACCCCCGCCTGTCTCAGGGAATAGCCTTTGATAAGAATCCCATGGAGATCTCTGGAACTCTATTACAGTGTGTTCAGATTTGTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 90 bp CTACCATTTTATTGTTCTGATTATTGGGGTACAGAATTGTCCATGTaGTCCAGGACTAGTTGGGCTATGACAGACACCACAGATTGCTCT +
Preference number: 1 (lower is better)
Translates to: LPFYCSDYWGTELSM*SRTSWAMTDTTDCS
Trigger: AGAGCAATCTGTGGTGTCTGTCATAGCCCAACTAGTCCTGGAGCACATGGACAATTCTGTACCCCAATAATCAGAACAATAAAATGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp CCGATATACCTGTGTAGTCCAGCTCATGGCATTGTAAGGATCAAATaGCATGCTGTATGCAAAAGGTCTTTGGAATCTATACACAAGGCT +
Preference number: 1 (lower is better)
Translates to: PIYLCSPAHGIVRIK*HAVCKRSLESIHKA
Trigger: AGCCTTGTGTATAGATTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGCTGGACTACACAGGTATATCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp AGTTCTGAAGTCCTAAAAAGACACATCCGGAAACTGCCATCATTATaGGGTTTTGTTACAAGGAAACAGCAGCCCACACTATTCAATGAA +
Preference number: 1 (lower is better)
Translates to: SSEVLKRHIRKLPSL*GFVTRKQQPTLFNE
Trigger: TTCATTGAATAGTGTGGGCTGCTGTTTCCTTGTAACAAAACCCCATAATGATGGCAGTTTCCGGATGTGTCTTTTTAGGACTTCAGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 90 bp ATACAAAACGCAGTGAGGCTTGAAATGACCATATCTAATGCTCACTaGATTCCAGAAAAAGGCAACAGACAACAGTCAATCCTGAGATAT +
Preference number: 1 (lower is better)
Translates to: IQNAVRLEMTISNAH*IPEKGNRQQSILRY
Trigger: ATATCTCAGGATTGACTGTTGTCTGTTGCCTTTTTCTGGAATGCAGTGAGCATTAGATATGGTCATTTCAAGCCTCACTGCGTTTTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 90 bp CTTGCTGGCAATATTGCTTCCTTCTGTTTGCTCAAATGTAGATTATaGAGGACATTAGCTTCAAAGTCAATGTTTAAGCATCTGGACTGC +
Preference number: 1 (lower is better)
Translates to: LAGNIASFCLLKCRL*RTLASKSMFKHLDC
Trigger: GCAGTCCAGATGCTTAAACATTGACTTTGAAGCTAATGTCCTTCATAATCTACATTTGAGCAAACAGAAGGAAGCAATATTGCCAGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 90 bp CTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGCAACTATaGCCTCAAATGATTTTAACACCAAGGAACTCTGCAGAAATTAGG +
Preference number: 1 (lower is better)
Translates to: LRAADGVYINHKQQL*PQMILTPRNSAEIR
Trigger: CCTAATTTCTGCAGAGTTCCTTGGTGTTAAAATCATTTGAGGTCATAGTTGCTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 90 bp TACTTGGGTAAAGAGGCTAGTAAGCCAGAAGAACACAGATGTTCCTaGAACTCTTCTTGCAGTTGCTTTAGGGTTAAAGATAAATTCTTA +
Preference number: 1 (lower is better)
Translates to: YLGKEASKPEEHRCS*NSSCSCFRVKDKFL
Trigger: TAAGAATTTATCTTTAACCCTAAAGCAACTGCAAGAAGAGTTTCAGGAACATCTGTGTTCTTCTGGCTTACTAGCCTCTTTACCCAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR TCA 90 bp TTTGCTAACTGGAGGGCAAATATTACTCAGTACATACGTGATTGTTaGTACTTGTGCTGTTTTGACCCATTTGCAAAAGTTATCCAGATT +
Preference number: 1 (lower is better)
Translates to: FANWRANITQYIRDC*YLCCFDPFAKVIQI
Trigger: AATCTGGATAACTTTTGCAAATGGGTCAAAACAGCACAAGTATCAACAATCACGTATGTACTGAGTAATATTTGCCCTCCAGTTAGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 90 bp TCTCTCCTACAGTGTATCACACTTGAAAGCATAAAGGAGTATCGTTaGAAATTGAGGCCTAGGAAGATATTATCTCATGTTTATAAGGAA +
Preference number: 1 (lower is better)
Translates to: SLLQCITLESIKEYR*KLRPRKILSHVYKE
Trigger: TTCCTTATAAACATGAGATAATATCTTCCTAGGCCTCAATTTCCAACGATACTCCTTTATGCTTTCAAGTGTGATACACTGTAGGAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR CCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATGAAGCTAGGGTCGGCTaGGCGCAGTGGCTCGAACCT +
Preference number: 2 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHEARVG*AQWLEP
Trigger: AGGTTCGAGCCACTGCGCCCAGCCGACCCTAGCTTC...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATTCTGGTGGGATGTGCTaGCCACTGAGGCAAAGAGGC +
Preference number: 2 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHSGGMC*PLRQRG
Trigger: GCCTCTTTGCCTCAGTGGTCAGCACATCCCACCAGA...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTCATGACTCCTCTCTCTaGCACCCTCCCTTCGTTAAC +
Preference number: 2 (lower is better)
Translates to: GSHHFQWEARCPCSATNTHDSSL*HPPFVN
Trigger: GTTAACGAAGGGAGGGTGGCAGAGAGAGGAGTCATG...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTGGATGTGCTGACCACTaGGGCAAAGAGGCTTCAATT +
Preference number: 2 (lower is better)
Translates to: GSHHFQWEARCPCSATNTGCADH*GKEASI
Trigger: AATTGAAGCCTCTTTGCCTCAGTGGTCAGCACATCC...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCTATGGGAGGCTGAGGTaGGTAGGTCACTTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLYGRLR*VGHLRS
Trigger: TGACCTCAAGTGACCTACCCACCTCAGCCTCCCATA...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp GGAGAAGCTGGGCACACTCTGCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCCTCTGTGCTCTTCGGTaGCAGGCATCAATCACACCA +
Preference number: 2 (lower is better)
Translates to: GEAGHTLRVHVSRKTRTGLCALR*QASITP
Trigger: TGGTGTGATTGATGCCTGTCACCGAAGAGCACAGAG...GCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp CCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATGACCCATGTAAGGAGGCTCTGTaGTCTTCGGTGACAGGCATC +
Preference number: 2 (lower is better)
Translates to: PIPKTLTRSSDLWASYDPCKEAL*SSVTGI
Trigger: GATGCCTGTCACCGAAGAGCACAGAGCCTCCTTACA...TGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR GCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATAAGCTGGGCACACTCTaGGCGTGCATGTTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHKLGTL*ACMFPE
Trigger: TTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTT...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATCTGCTGTATCTGGAATaGGAAAGGCGCACAGAATCC +
Preference number: 2 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHLLYLE*ERRTES
Trigger: GGATTCTGTGCGCCTTTCCCATTCCAGATACAGCAG...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 90 bp GCACACTCTGCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCGGTaGAGATCTCAGATGAACCATGTGTGTTCATCCCCTCCGGTATCC +
Preference number: 2 (lower is better)
Translates to: AHSARACFQKNEDRR*RSQMNHVCSSPPVS
Trigger: GGATACCGGAGGGGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 90 bp AAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTaGCCCCTGCAGCGCCACCAACACTTAAGGGGAAAGGATGGAGAG +
Preference number: 2 (lower is better)
Translates to: KPLSKRKSPLPMGGT*PLQRHQHLRGKDGE
Trigger: CTCTCCATCCTTTCCCCTTAAGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp CAAACAAGAGAAACGCTGTCAGAGTCAGGCAGTAGGCAGCACCCCCTAAACTGCCTCTGTGCTCTTCGGTaGCAGGCATCAATCACACCA +
Preference number: 2 (lower is better)
Translates to: QTRETLSESGSRQHPLNCLCALR*QASITP
Trigger: TGGTGTGATTGATGCCTGTCACCGAAGAGCACAGAG...GCAGTTTAGGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR TCA 90 bp CTGATACCAACCTGTGGACTTGAGAGGGAGGCCTTCCCAGATTATCCTTTCCTCCCTATGGGCTTCCTATaGCCCACCTCTCACCAGTCT +
Preference number: 2 (lower is better)
Translates to: LIPTCGLEREAFPDYPFLPMGFL*PTSHQS
Trigger: AGACTGGTGAGAGGTGGGTCATAGGAAGCCCATAGG...GAGGAAAGGATAATCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTACCAACCTGTGGACTTaGGAGGGAGGCCTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: RQANLYQRGSHHFQWEARTNLWT*EGGLPR
Trigger: TCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGT...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATGAAGCAAGGTTGTACTaGGGTCAGATGGATGTGAGT +
Preference number: 2 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHEARLY*GQMDVS
Trigger: ACTCACATCCATCTGACCCCAGTACAACCTTGCTTC...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATGCAGTTCTCTCTGTTTaGCTTGCAGAAGGCAATCTT +
Preference number: 2 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHAVLSV*LAEGNL
Trigger: AAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGC...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp GATCTGTCTCCCAATGGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTATCGGTACTATCATATaGCTAAAGCAGGATGAATGG +
Preference number: 2 (lower is better)
Translates to: DLSPNGTRPPPGQRIQQCIGTII*LKQDEW
Trigger: CCATTCATCCTGCTTTAGTCATATGATAGTACCGAT...ACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp GATCTGTCTCCCAATGGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTTATATGGGGGAAATCTaGCCATTTGCTTATAGGCAA +
Preference number: 2 (lower is better)
Translates to: DLSPNGTRPPPGQRIQQCYMGEI*PFAYRQ
Trigger: TTGCCTATAAGCAAATGGTCAGATTTCCCCCATATA...ACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCTCGAAGAAGAGTTCTTaGATTTGCCAGGCATTTCTC +
Preference number: 2 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLSKKSS*ICQAFL
Trigger: GAGAAATGCCTGGCAAATGCAAGAACTCTTCTTCGA...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp GGAGAAGCTGGGCACACTCTGCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCGCTATGATAACAAGATaGAGAGTACGAGGGCACAAG +
Preference number: 2 (lower is better)
Translates to: GEAGHTLRVHVSRKTRTGAMITR*RVRGHK
Trigger: CTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGC...GCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp GGAGAAGCTGGGCACACTCTGCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCTACCCACACTCTTCTTaGACAGGTAAAACTGGTACC +
Preference number: 2 (lower is better)
Translates to: GEAGHTLRVHVSRKTRTGYPHSS*TGKTGT
Trigger: GGTACCAGTTTTACCTGTCCAAGAAGAGTGTGGGTA...GCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTaGGTGCATACAGCAAGGCTGTCACTAGTGCTCCTTTATCATTAT +
Preference number: 2 (lower is better)
Translates to: HTRTDIRERHCPGWS*VHTARLSLVLLYHY
Trigger: ATAATGATAAAGGAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTATGGAGGAACTGTCATaGGGAGCCACCTGTGTCACA +
Preference number: 2 (lower is better)
Translates to: RQANLYQRGSHHFQWEARMEELS*GATCVT
Trigger: TGTGACACAGGTGGCTCCTCATGACAGTTCCTCCAT...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp CCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATGACCCAGAGCTGTATATAGGATaGTGGTTTCAATCCGGATTC +
Preference number: 2 (lower is better)
Translates to: PIPKTLTRSSDLWASYDPELYIG*WFQSGF
Trigger: GAATCCGGATTGAAACCAGCATCCTATATACAGCTC...TGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR GCA 90 bp CTGATACCAACCTGTGGACTTGAGAGGGAGGCCTTCCCAGATTATCCTTTCCTCGGCACACTCTGCGCGTaGATGTTTCCAGAAAAACGA +
Preference number: 2 (lower is better)
Translates to: LIPTCGLEREAFPDYPFLGTLCA*MFPEKR
Trigger: TCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCC...GAGGAAAGGATAATCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCTCTTGCTGGCAATATTaGTTCCTTCTGTTTGCTCAA +
Preference number: 2 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLSCWQY*FLLFAQ
Trigger: TTGAGCAAACAGAAGGAAGCAATATTGCCAGCAAGA...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp CAGAAAAACGAGGACAGGCGGTTGAGATCTCAGATGAACCATGTGTGTTCATCCCGGTCCTCAGACCTATaGGCTTCCTATGACCCACCT +
Preference number: 2 (lower is better)
Translates to: QKNEDRRLRSQMNHVCSSRSSDL*ASYDPP
Trigger: AGGTGGGTCATAGGAAGCCCATAGGTCTGAGGACCG...GGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACGGATCTGTCTCCCAATaGGACCCGGCCACCCCCAGG +
Preference number: 2 (lower is better)
Translates to: HRKQTLQIQINRREGEKNGSVSQ*DPATPR
Trigger: CCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATCC...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp AGGGCAATGTCTGACAGATACAACCAAGTTGGGGATGAATCGAAGAAGAGTTCTCAGGGCATGGCCACCTaGTGTCTTCCACTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: RAMSDRYNQVGDESKKSSQGMAT*CLPLSG
Trigger: CCCTGAAAGTGGAAGACATCAGGTGGCCATGCCCTG...AGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp GGAGAAGCTGGGCACACTCTGCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCGAAGAAGATCTAACATaGAAGTCACCACATCTCACA +
Preference number: 2 (lower is better)
Translates to: GEAGHTLRVHVSRKTRTGEEDLT*KSPHLT
Trigger: TGTGAGATGTGGTGACTTTCATGTTAGATCTTCTTC...GCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp GGAGAAGCTGGGCACACTCTGCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCATGAATGAAGAAAGATaGGATGAGTGCCATCTAAGG +
Preference number: 2 (lower is better)
Translates to: GEAGHTLRVHVSRKTRTGMNEER*DECHLR
Trigger: CCTTAGATGGCACTCATCTCATCTTTCTTCATTCAT...GCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCAAGGATCAAATGGCATaGTGTATGCAAAAGGTCTTT +
Preference number: 2 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLKDQMA*CMQKVF
Trigger: AAAGACCTTTTGCATACAGCATGCCATTTGATCCTT...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp GAAGCAGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTGGGTCCATTGACTTACCATaGCACCTTGGCAAACTCCTT +
Preference number: 2 (lower is better)
Translates to: EAGPEERNQLWSRSHKCGSIDLP*HLGKLL
Trigger: AAGGAGTTTGCCAAGGTGGCATGGTAAGTCAATGGA...CCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACCAGGGTGGAGCTTGGTaGATACAGCAAGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHQGGAW*IQQGCH
Trigger: GTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTG...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATCAATGTTTAAGCATCTaGACTGCTGAAAAGATGGCA +
Preference number: 2 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHQCLSI*TAEKMA
Trigger: TGCCATCTTTTCAGCAGTCCAGATGCTTAAACATTG...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 90 bp ATACAAATCACCTGGCGTACTGTTCCAAGCACCCAAGTGCTTGCTTaGGCCCTTCCATTGACTTACCATGCCACCTTGGCAAACTCCTTA +
Preference number: 2 (lower is better)
Translates to: IQITWRTVPSTQVLA*ALPLTYHATLANSL
Trigger: TAAGGAGTTTGCCAAGGTGGCATGGTAAGTCAATGGAAGGGCCAAAGCAAGCACTTGGGTGCTTGGAACAGTACGCCAGGTGATTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 90 bp CAGCATTCAGCACAGTTTCTAGCACGCTGGAGACACTGGACAGTATaGCGATGGAGGACTAAAGGTAGCTTTCCTTCACATGACTCCTCT +
Preference number: 2 (lower is better)
Translates to: QHSAQFLARWRHWTV*RWRTKGSFPSHDSS
Trigger: AGAGGAGTCATGTGAAGGAAAGCTACCTTTAGTCCTCCATCGCAATACTGTCCAGTGTCTCCAGCGTGCTAGAAACTGTGCTGAATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp ACTTATTGCAAAGCCAGGCGTGGACGCGATGCTTTCATATACATTCTCTCTCCTGGGGTCAGATGGATGTaGGTAAGCCAAAAAGCGTGC +
Preference number: 2 (lower is better)
Translates to: TYCKARRGRDAFIYILSPGVRWM*VSQKAC
Trigger: GCACGCTTTTTGGCTTACTCACATCCATCTGACCCC...AGGAGAGAGAATGTATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAATAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp ACTTATTGCAAAGCCAGGCGTGGACGCGATGCTTTCATATACATTCTCTCTCCTGGAAGAGATGGCTCCTaGGGATCTATCCCTCCACTT +
Preference number: 2 (lower is better)
Translates to: TYCKARRGRDAFIYILSPGRDGS*GSIPPL
Trigger: AAGTGGAGGGATAGATCCGCAGGAGCCATCTCTTCC...AGGAGAGAGAATGTATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAATAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACTTGACCCCTGCCATGTaGCCAGCATTCAGCACAGTT +
Preference number: 2 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHLTPAM*PAFSTV
Trigger: AACTGTGCTGAATGCTGGGCACATGGCAGGGGTCAA...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTTCTGATTGTAAAAGCTaGCTCCTCTCACCTGACCAC +
Preference number: 2 (lower is better)
Translates to: RQANLYQRGSHHFQWEARSDCKS*LLSPDH
Trigger: GTGGTCAGGTGAGAGGAGGCAGCTTTTACAATCAGA...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTGACAATGAACTGAAATaGGCTCCCATCTGCTCTGTC +
Preference number: 2 (lower is better)
Translates to: RQANLYQRGSHHFQWEARDNELK*APICSV
Trigger: GACAGAGCAGATGGGAGCCCATTTCAGTTCATTGTC...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 90 bp TCCATACCACGGACTCCAGGGCAATGTCTGACAGATACAACCAAGTaGGGGATGAATCGAAGAAGAGTTCTTGCATTTGCCAGGCATTTC +
Preference number: 2 (lower is better)
Translates to: SIPRTPGQCLTDTTK*GMNRRRVLAFARHF
Trigger: GAAATGCCTGGCAAATGCAAGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCTGGAGTCCGTGGTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCGCAGTTCTCTCTGTTTaGCTTGCAGAAGGCAATCTT +
Preference number: 2 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIAVLSV*LAEGNL
Trigger: AAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGC...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR TCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTCACCACATCTCACAATaGGAATCCGATCAGATGGAA +
Preference number: 2 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSHHISQ*ESDQME
Trigger: TTCCATCTGATCGGATTCTCATTGTGAGATGTGGTG...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR TCA 90 bp CAAACAAGAGAAACGCTGTCAGAGTCAGGCAGTAGGCAGCACCCCCTAAACTGCAGATGGATGGAAGTTTaGCAGAAGCATAAAAACTCC +
Preference number: 2 (lower is better)
Translates to: QTRETLSESGSRQHPLNCRWMEV*QKHKNS
Trigger: GGAGTTTTTATGCTTCTGTCAAACTTCCATCCATCT...GCAGTTTAGGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR TCA 90 bp GCTCATGGCATTGTAAGGATCAAATGGCATGCTGTATGCAAAAGGTCTTTGGAAGGCACAAGAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: AHGIVRIKWHAVCKRSLEGTRIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTCTTGTGCC...TTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp CGGCATGTACCAACCAGGCCACACAACAGCATAGAACTGAGGGGACCAAGCTTCAGTATCGTTGGAAATTaGGGCCTAGGAAGATATTAT +
Preference number: 2 (lower is better)
Translates to: RHVPTRPHNSIELRGPSFSIVGN*GLGRYY
Trigger: ATAATATCTTCCTAGGCCTCAATTTCCAACGATACT...GAAGCTTGGTCCCCTCAGTTCTATGCTGTTGTGTGGCCTGGTTGGTACATGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGCTGCCTCCTCTCACCTaGCCACAGTTCCCCATTGGT +
Preference number: 2 (lower is better)
Translates to: LRGCELRAADGVYINHKQLPPLT*PQFPIG
Trigger: ACCAATGGGGAACTGTGGTCAGGTGAGAGGAGGCAG...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp CTGATACCAACCTGTGGACTTGAGAGGGAGGCCTTCCCAGATTATCCTTTCCTCACAGGAAAAACTCTTTaGGAAAGTCCAGGTGGTAGA +
Preference number: 2 (lower is better)
Translates to: LIPTCGLEREAFPDYPFLTGKTL*ESPGGR
Trigger: TCTACCACCTGGACTTTCCCAAAGAGTTTTTCCTGT...GAGGAAAGGATAATCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTACGATCTGCTGTATCTaGAATGGGAAAGGCGCACAG +
Preference number: 2 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFTICCI*NGKGAQ
Trigger: CTGTGCGCCTTTCCCATTCCAGATACAGCAGATCGT...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR CCA 90 bp AGGGCAATGTCTGACAGATACAACCAAGTTGGGGATGAATCGAAGAAGAGTTCTTCCCAGGGCCCTAGGTaGAGGTTTGGGACAAATATG +
Preference number: 2 (lower is better)
Translates to: RAMSDRYNQVGDESKKSSSQGPR*RFGTNM
Trigger: CATATTTGTCCCAAACCTCCACCTAGGGCCCTGGGA...AGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTTCCCAGGGCCCTAGGTaGAGGTTTGGGACAAATATG +
Preference number: 2 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCSQGPR*RFGTNM
Trigger: CATATTTGTCCCAAACCTCCACCTAGGGCCCTGGGA...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR CCA 90 bp GAAGCAGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTGGGATAAAGGAGTATCGTTaGAAATTGAGGCCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: EAGPEERNQLWSRSHKCGIKEYR*KLRPRK
Trigger: CTTCCTAGGCCTCAATTTCCAACGATACTCCTTTAT...CCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTGAGAGAAACCAACTCTaGAGCCGATCTCACAAATGT +
Preference number: 2 (lower is better)
Translates to: RQANLYQRGSHHFQWEARERNQL*SRSHKC
Trigger: ACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTC...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACAGGCACTGCCCAGGGTaGAGCTTGGTGCATACAGCA +
Preference number: 2 (lower is better)
Translates to: HRKQTLQIQINRREGEKNRHCPG*SLVHTA
Trigger: TGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGAGTGCTCCTGCCCTCTaGCCCACACATCCAAAAGTT +
Preference number: 2 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMSAPAL*PTHPKV
Trigger: AACTTTTGGATGTGTGGGTCAGAGGGCAGGAGCACT...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGGATTTCTGTCTGCTTTaGCCCCTGCCATGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: LRGCELRAADGVYINHKQDFCLL*PLPCAQ
Trigger: CTGGGCACATGGCAGGGGTCAAAGCAGACAGAAATC...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTAGCAACAGTACGATCTaGTGTATCTGGAATGGGAAA +
Preference number: 2 (lower is better)
Translates to: RQANLYQRGSHHFQWEARSNSTI*CIWNGK
Trigger: TTTCCCATTCCAGATACAGCAGATCGTACTGTTGCT...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp AGGGCAATGTCTGACAGATACAACCAAGTTGGGGATGAATCGAAGAAGAGTTCTTGCAATCAAGCCACATaGAGCTGGTCAAAGCACACC +
Preference number: 2 (lower is better)
Translates to: RAMSDRYNQVGDESKKSSCNQAT*SWSKHT
Trigger: GGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA...AGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACGCATGTTTATATAAGTaGTCCTGCCCTCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHACLYK*SCPLTH
Trigger: GTGGGTCAGAGGGCAGGAGCACTTATATAAACATGC...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTACAGGAAAAACTCTTTaGGAAAGTCCAGGTGGTAGA +
Preference number: 2 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSTGKTL*ESPGGR
Trigger: TCTACCACCTGGACTTTCCCAAAGAGTTTTTCCTGT...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR CCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCGGTTTGGGACAAATATaGTATTTGGTCACAAGGAGC +
Preference number: 2 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIGLGQI*YLVTRS
Trigger: GCTCCTTGTGACCAAATACCATATTTGTCCCAAACC...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR CAA 90 bp GTCGCTAGCCCCTGGCAACCTCCCTTCCACTTTGTGTCTCTGCATTaGACTACTCTAGGTACTTCACATAAGTGGAATCATAGTATTTGT +
Preference number: 2 (lower is better)
Translates to: VASPWQPPFHFVSLH*TTLGTSHKWNHSIC
Trigger: ACAAATACTATGATTCCACTTATGTGAAGTACCTAGAGTAGTCAAATGCAGAGACACAAAGTGGAAGGGAGGTTGCCAGGGGCTAGCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR-3UTR TCA 90 bp GGAAGAGATGGCTCCTGCGGATCTATCCCTCCACTTCCTTGCATTTCTCTACATAGATGGATGGAAGTTTaGCAGAAGCATAAAAACTCC +
Preference number: 2 (lower is better)
Translates to: GRDGSCGSIPPLPCISLHRWMEV*QKHKNS
Trigger: GGAGTTTTTATGCTTCTGTCAAACTTCCATCCATCT...ATGTAGAGAAATGCAAGGAAGTGGAGGGATAGATCCGCAGGAGCCATCTCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp GGAAGAGATGGCTCCTGCGGATCTATCCCTCCACTTCCTTGCATTTCTCTACATTATGGAAAATTACCATaGAGAGAAGCACATCCTGTG +
Preference number: 2 (lower is better)
Translates to: GRDGSCGSIPPLPCISLHYGKLP*REAHPV
Trigger: CACAGGATGTGCTTCTCTTCATGGTAATTTTCCATA...ATGTAGAGAAATGCAAGGAAGTGGAGGGATAGATCCGCAGGAGCCATCTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGACATGGTACTGCTTGTaGGGATGTGGTGATCGATGG +
Preference number: 2 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMTWYCL*GCGDRW
Trigger: CCATCGATCACCACATCCTCACAAGCAGTACCATGT...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp ACACTTTTCTCCATGGAATGTGGAGTGACAAATTATCTCAAACCAAAGTCATCCCACCCCCTAAACTGCTaGCTCCTCTCTCCTACAGTG +
Preference number: 2 (lower is better)
Translates to: TLFSMECGVTNYLKPKSSHPLNC*LLSPTV
Trigger: CACTGTAGGAGAGAGGAGGCAGCAGTTTAGGGGGTG...GGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCCATGGAGAAAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTGAATTCCTGGAACAGTaGGTGGGACACCTTTATTCA +
Preference number: 2 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCEFLEQ*VGHLYS
Trigger: TGAATAAAGGTGTCCCACTCACTGTTCCAGGAATTC...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR-3UTR TCA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGCTCCAGGGCAATGTCTaGCAGATACAACCAAGTTGG +
Preference number: 2 (lower is better)
Translates to: LRGCELRAADGVYINHKQLQGNV*QIQPSW
Trigger: CCAACTTGGTTGTATCTGTCAGACATTGCCCTGGAG...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp ACACTTTTCTCCATGGAATGTGGAGTGACAAATTATCTCAAACCAAAGTCATCCCTCTACCCCCAGGGATaGCCAGACAGACAACATGTT +
Preference number: 2 (lower is better)
Translates to: TLFSMECGVTNYLKPKSSLYPQG*PDRQHV
Trigger: AACATGTTGTCTGTCTGGTCATCCCTGGGGGTAGAG...GGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCCATGGAGAAAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTACTGAAGACATCAGATaGTATGATAACAAGATGGAG +
Preference number: 2 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSTEDIR*YDNKME
Trigger: CTCCATCTTGTTATCATAGCATCTGATGTCTTCAGT...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR GCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATACAGCACCCCCTAAACTaGTGCCTCCTCTCTCCTACA +
Preference number: 2 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIQHPLN*CLLSPT
Trigger: TGTAGGAGAGAGGAGGCAGCAGTTTAGGGGGTGCTG...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR GCA 90 bp ACACTTTTCTCCATGGAATGTGGAGTGACAAATTATCTCAAACCAAAGTCATCCGCAGGGATTTCTGTCTaGTTTGACCCCTGCCATGTG +
Preference number: 2 (lower is better)
Translates to: TLFSMECGVTNYLKPKSSAGISV*FDPCHV
Trigger: CACATGGCAGGGGTCAAAGCAGACAGAAATCCCTGC...GGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCCATGGAGAAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAACTGCTGTATCTGGAATaGGAAAGGCGCACAGAATCC +
Preference number: 2 (lower is better)
Translates to: PSISRSFSSFHLKLCTHELLYLE*ERRTES
Trigger: GGATTCTGTGCGCCTTTCCCATTCCAGATACAGCAG...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR-3UTR CCA 90 bp CTGATACCAACCTGTGGACTTGAGAGGGAGGCCTTCCCAGATTATCCTTTCCTCACTGAAACATTTATATaGACATTAAAACGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LIPTCGLEREAFPDYPFLTETFI*TLKRGR
Trigger: TCTGCCCCGTTTTAATGTCCATATAAATGTTTCAGT...GAGGAAAGGATAATCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp ACACTTTTCTCCATGGAATGTGGAGTGACAAATTATCTCAAACCAAAGTCATCCTTTAGCACGGCTCAATaGCGGACACCACTGACTTCC +
Preference number: 2 (lower is better)
Translates to: TLFSMECGVTNYLKPKSSFSTAQ*RTPLTS
Trigger: GGAAGTCAGTGGTGTCCGCCATTGAGCCGTGCTAAA...GGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCCATGGAGAAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAGGGGTCAGATGGATGTaGGTAAGCCAAAAAGCGTGC +
Preference number: 2 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIGVRWM*VSQKAC
Trigger: GCACGCTTTTTGGCTTACTCACATCCATCTGACCCC...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR TCA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACGGGAAAGAATTTAGCTaGAAAAGGGTCCATGTCTAT +
Preference number: 2 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHGKEFS*KRVHVY
Trigger: ATAGACATGGACCCTTTTTCAGCTAAATTCTTTCCC...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAGCAACAGTACGATCTaGTGTATCTGGAATGGGAAA +
Preference number: 2 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCSNSTI*CIWNGK
Trigger: TTTCCCATTCCAGATACAGCAGATCGTACTGTTGCT...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR GCA 90 bp CAGAAAAACGAGGACAGGCGGTTGAGATCTCAGATGAACCATGTGTGTTCATCCATATCTAATGCTCACTaGATTCCAGAAAAAGGCAAC +
Preference number: 2 (lower is better)
Translates to: QKNEDRRLRSQMNHVCSSISNAH*IPEKGN
Trigger: GTTGCCTTTTTCTGGAATGCAGTGAGCATTAGATAT...GGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp ACACTTTTCTCCATGGAATGTGGAGTGACAAATTATCTCAAACCAAAGTCATCCTCCAGCAGCCACAACTaGTGGGCAGTTAATGAGAAG +
Preference number: 2 (lower is better)
Translates to: TLFSMECGVTNYLKPKSSSSSHN*WAVNEK
Trigger: CTTCTCATTAACTGCCCAGCAGTTGTGGCTGCTGGA...GGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCCATGGAGAAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGCCGATCTCACAAATGTaGGCTACATGGAATCCAGGA +
Preference number: 2 (lower is better)
Translates to: LRGCELRAADGVYINHKQPISQM*ATWNPG
Trigger: TCCTGGATTCCATGTAGCCCACATTTGTGAGATCGG...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 90 bp GGATCTACCTACAAATGCACTTTCAAAACATTAACTCAGTGTGCTTaGGTGGTGGGCTCCAGGTCTCCAAACCATGTGAATATGTATTCA +
Preference number: 2 (lower is better)
Translates to: GSTYKCTFKTLTQCA*VVGSRSPNHVNMYS
Trigger: TGAATACATATTCACATGGTTTGGAGACCTGGAGCCCACCACCAAAGCACACTGAGTTAATGTTTTGAAAGTGCATTTGTAGGTAGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 90 bp GAATCACAACTACCATTTTATTGTTCTGATTATTGGGGTACAGAATaGTCCATGTGCTCCAGGACTAGTTGGGCTATGACAGACACCACA +
Preference number: 2 (lower is better)
Translates to: ESQLPFYCSDYWGTE*SMCSRTSWAMTDTT
Trigger: TGTGGTGTCTGTCATAGCCCAACTAGTCCTGGAGCACATGGACAATTCTGTACCCCAATAATCAGAACAATAAAATGGTAGTTGTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATACCCTGCTTGCTGTTGTaGATACCTCTACACTGCAAG +
Preference number: 2 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIPCLLL*IPLHCK
Trigger: CTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGG...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR-3UTR TCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACCACCACATCTCACAATaGGAATCCGATCAGATGGAA +
Preference number: 2 (lower is better)
Translates to: HRKQTLQIQINRREGEKNHHISQ*ESDQME
Trigger: TTCCATCTGATCGGATTCTCATTGTGAGATGTGGTG...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGTGCAGGGTTGTTCTGTaGAAATCTCAGAGAAGCATG +
Preference number: 2 (lower is better)
Translates to: LRGCELRAADGVYINHKQCRVVL*KSQRSM
Trigger: CATGCTTCTCTGAGATTTTCACAGAACAACCCTGCA...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp ACTTATTGCAAAGCCAGGCGTGGACGCGATGCTTTCATATACATTCTCTCTCCTACTGAAGACATCAGATaGTATGATAACAAGATGGAG +
Preference number: 2 (lower is better)
Translates to: TYCKARRGRDAFIYILSPTEDIR*YDNKME
Trigger: CTCCATCTTGTTATCATAGCATCTGATGTCTTCAGT...AGGAGAGAGAATGTATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGGAGCTGTATATAGGATaGTGGTTTCAATCCGGATTC +
Preference number: 2 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMELYIG*WFQSGF
Trigger: GAATCCGGATTGAAACCAGCATCCTATATACAGCTC...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR GCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATATGCAATCAAGCCACATaGAGCTGGTCAAAGCACACC +
Preference number: 2 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLICNQAT*SWSKHT
Trigger: GGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR CCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATACAAGCCACATGCAGCTaGTCAAAGCACACCTCATCT +
Preference number: 2 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIQATCS*SKHTSS
Trigger: AGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTG...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR CAA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTaGCTTATAGGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAA +
Preference number: 2 (lower is better)
Translates to: PCLFVLQPIWGKSDH*LIGKPSKQPDSLPK
Trigger: TTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCCTATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR GCA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACGTACCCATGAAACAATaGCTCCCCATTCCATCTTCG +
Preference number: 2 (lower is better)
Translates to: VNITSFLFPYPKSSANSHVPMKQ*LPIPSS
Trigger: CGAAGATGGAATGGGGAGGCATTGTTTCATGGGTAC...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR-3UTR CCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAGAAGCAAGGTTGTACTaGGGTCAGATGGATGTGAGT +
Preference number: 2 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIEARLY*GQMDVS
Trigger: ACTCACATCCATCTGACCCCAGTACAACCTTGCTTC...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR CCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACATTCAACAGTGTCTATaGAAGGCACTCACAGACAAC +
Preference number: 2 (lower is better)
Translates to: HRKQTLQIQINRREGEKNIQQCL*KALTDN
Trigger: GTTGTCTGTGAGTGCCTTCCATAGACACTGTTGAAT...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAGGTTTGGGACAAATATaGTATTTGGTCACAAGGAGC +
Preference number: 2 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTGLGQI*YLVTRS
Trigger: GCTCCTTGTGACCAAATACCATATTTGTCCCAAACC...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR CCA 90 bp ACACTTTTCTCCATGGAATGTGGAGTGACAAATTATCTCAAACCAAAGTCATCCATAAACAAAGCTCCTTaGCAACACTGGACTTGTGTG +
Preference number: 2 (lower is better)
Translates to: TLFSMECGVTNYLKPKSSINKAP*QHWTCV
Trigger: CACACAAGTCCAGTGTTGCCAAGGAGCTTTGTTTAT...GGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCCATGGAGAAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR TCA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCAACCTACAACGTTTATaGGGACAAACTGCAAACTTA +
Preference number: 2 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCNLQRL*GQTANL
Trigger: TAAGTTTGCAGTTTGTCCTCATAAACGTTGTAGGTT...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR-3UTR TCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAACAGTGTATCACACTTaGAAGCATAAAGGAGTATCG +
Preference number: 2 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTTVYHT*KHKGVS
Trigger: CGATACTCCTTTATGCTTTCAAGTGTGATACACTGT...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR TCA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGGTCAAATCCCTAAAGTaGCAGACTTTAGCTGTAAAT +
Preference number: 2 (lower is better)
Translates to: LRGCELRAADGVYINHKQVKSLK*QTLAVN
Trigger: ATTTACAGCTAAAGTCTGTCACTTTAGGGATTTGAC...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACGAACTTCTACATCAGTaGACTCAACACTTACAAATT +
Preference number: 2 (lower is better)
Translates to: HRKQTLQIQINRREGEKNELLHQ*TQHLQI
Trigger: AATTTGTAAGTGTTGAGTCCACTGATGTAGAAGTTC...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CCA 90 bp ACACTTTTCTCCATGGAATGTGGAGTGACAAATTATCTCAAACCAAAGTCATCCGGACTGCTGAAAAGATaGCAGAATAAATGCATGTTT +
Preference number: 2 (lower is better)
Translates to: TLFSMECGVTNYLKPKSSGLLKR*QNKCMF
Trigger: AAACATGCATTTATTCTGCCATCTTTTCAGCAGTCC...GGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCCATGGAGAAAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 90 bp GTCTTTGGAATCTATACACAAGGCTGTAAAACTATGTCACACTGTTaGGATGGAAAGAATTCTGTATTCAGGAGCCAAAATCAGATATTC +
Preference number: 2 (lower is better)
Translates to: VFGIYTQGCKTMSHC*DGKNSVFRSQNQIF
Trigger: GAATATCTGATTTTGGCTCCTGAATACAGAATTCTTTCCATCCAAACAGTGTGACATAGTTTTACAGCCTTGTGTATAGATTCCAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp AGGGCTCTGGGACTAAATCATCAGGGCATGGCCACCTaGTGTCTTCCACTTTCAGGGTCCCAGGGCCCTAGG +
Preference number: 3 (lower is better)
Translates to: RALGLNHQGMAT*CLPLSGSQGPR
Trigger: CCTAGGGCCCTGGGACCCTGAAAGTGGAAGACATCAGGTGGCCATGCCCTGATGATTTAGTCCCAGAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR GCA 72 bp GGCAACAGTCGGGAGAAGCTGGGCACACTCTGCGCGTaGATGTTTCCAGAAAAACGAGGACAGGCGGTTGAG +
Preference number: 3 (lower is better)
Translates to: GNSREKLGTLCA*MFPEKRGQAVE
Trigger: CTCAACCGCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCCCGACTGTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 72 bp AGGACTGGCAACAGTCGGGAGAAGCTGGGCACACTCTaGGCGTGCATGTTTCCAGAAAAACGAGGACAGGCG +
Preference number: 3 (lower is better)
Translates to: RTGNSREKLGTL*ACMFPEKRGQA
Trigger: CGCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCCCGACTGTTGCCAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp GGGAATGGGGAAATGCAAAGAGGATCTGTCTCCCAATaGGACCCGGCCACCCCCAGGGCAGAGGATTCAACA +
Preference number: 3 (lower is better)
Translates to: GNGEMQRGSVSQ*DPATPRAEDST
Trigger: TGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATCCTCTTTGCATTTCCCCATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp CCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATaGGCTTCCTATGACCCACCTCTCACCAGTCTCTCA +
Preference number: 3 (lower is better)
Translates to: PIPKTLTRSSDL*ASYDPPLTSLS
Trigger: TGAGAGACTGGTGAGAGGTGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR TCA 72 bp TCCCACTGCTGGGTCACTCAGCTCTACCCCCAGGGATaGCCAGACAGACAACATGTTCTAAGGCATGGAGGA +
Preference number: 3 (lower is better)
Translates to: SHCWVTQLYPQG*PDRQHVLRHGG
Trigger: TCCTCCATGCCTTAGAACATGTTGTCTGTCTGGTCATCCCTGGGGGTAGAGCTGAGTGACCCAGCAGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 72 bp AGGCAGGGATTTCTGTCTGCTTTGACCCCTGCCATGTaGCCAGCATTCAGCACAGTTTCTAGCACGCTGGAG +
Preference number: 3 (lower is better)
Translates to: RQGFLSALTPAM*PAFSTVSSTLE
Trigger: CTCCAGCGTGCTAGAAACTGTGCTGAATGCTGGGCACATGGCAGGGGTCAAAGCAGACAGAAATCCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp AGCTCTGAAGGTGACGAAAGCTTGCTGCCGGATGTCTaGTGGGATGTGCTGACCACTGAGGCAAAGAGGCTT +
Preference number: 3 (lower is better)
Translates to: SSEGDESLLPDV*WDVLTTEAKRL
Trigger: AAGCCTCTTTGCCTCAGTGGTCAGCACATCCCACCAGACATCCGGCAGCAAGCTTTCGTCACCTTCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp ACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTaGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTG +
Preference number: 3 (lower is better)
Translates to: TRTDIRERHCPG*SLVHTARLSLV
Trigger: CACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp GCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATaGGAGGCACGTTGCCCCTGCAGCGCCACCAACACT +
Preference number: 3 (lower is better)
Translates to: ANLYQRGSHHFQ*EARCPCSATNT
Trigger: AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp GATCTGTCTCCCAATGGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTAGCAGTTCTCTCTGTTaGACTTGCAGAAGGCAATCT +
Preference number: 3 (lower is better)
Translates to: DLSPNGTRPPPGQRIQQCSSSLC*TCRRQS
Trigger: AGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCT...ACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTACTTACCATGCCACCTaGGCAAACTCCTTAATTGCT +
Preference number: 3 (lower is better)
Translates to: GSHHFQWEARCPCSATNTTYHAT*ANSLIA
Trigger: AGCAATTAAGGAGTTTGCCAAGGTGGCATGGTAAGT...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 72 bp AGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTaGTCTTCGGTGACAGGCATCAATCACACCACAGCA +
Preference number: 3 (lower is better)
Translates to: RVRGHKSCKEAL*SSVTGINHTTA
Trigger: TGCTGTGGTGTGATTGATGCCTGTCACCGAAGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR GCA 72 bp GGTCAGCAAGACAATGAACTGAAATGGGCTCCCATCTaGTCTGTCTACCTGAAGCCACAGTGTGGGGACCTC +
Preference number: 3 (lower is better)
Translates to: GQQDNELKWAPI*SVYLKPQCGDL
Trigger: GAGGTCCCCACACTGTGGCTTCAGGTAGACAGAGCAGATGGGAGCCCATTTCAGTTCATTGTCTTGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp CTTGGCAAAACAGGACTGGCAACAGTCGGGAGAAGCTaGGCACACTCTGCGCGTGCATGTTTCCAGAAAAAC +
Preference number: 3 (lower is better)
Translates to: LGKTGLATVGRS*AHSARACFQKN
Trigger: GTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCCCGACTGTTGCCAGTCCTGTTTTGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp GACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATaGCCCACCTCTCACCAGTCTCTCAGAAGTACATCA +
Preference number: 3 (lower is better)
Translates to: DTDSVLRPMGFL*PTSHQSLRSTS
Trigger: TGATGTACTTCTGAGAGACTGGTGAGAGGTGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR TCA 72 bp TCGGCCCCTTACATGGTACTGCTTGTGAGGATGTGGTaGTCGATGGGCCTTCCTCAAACAAGAGAAACGCTG +
Preference number: 3 (lower is better)
Translates to: SAPYMVLLVRMW*SMGLPQTRETL
Trigger: CAGCGTTTCTCTTGTTTGAGGAAGGCCCATCGATCACCACATCCTCACAAGCAGTACCATGTAAGGGGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR TCA 72 bp CTTGCTGCCGGATGTCTGGTGGGATGTGCTGACCACTaGGGCAAAGAGGCTTCAATTCTACAAACAGGCCAA +
Preference number: 3 (lower is better)
Translates to: LAAGCLVGCADH*GKEASILQTGQ
Trigger: TTGGCCTGTTTGTAGAATTGAAGCCTCTTTGCCTCAGTGGTCAGCACATCCCACCAGACATCCGGCAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp CAGAATTGTCCATGTGCTCCAGGACTAGTTGGGCTATaGCAGACACCACAGATTGCTCTGCAACTTCCGGGG +
Preference number: 3 (lower is better)
Translates to: QNCPCAPGLVGL*QTPQIALQLPG
Trigger: CCCCGGAAGTTGCAGAGCAATCTGTGGTGTCTGTCATAGCCCAACTAGTCCTGGAGCACATGGACAATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTGTATGCAAAAGGTCTTaGGAATCTATACACAAGGCT +
Preference number: 3 (lower is better)
Translates to: GSHHFQWEARCPCSATNTVCKRS*ESIHKA
Trigger: AGCCTTGTGTATAGATTCCAAAGACCTTTTGCATAC...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTCCACACATCCAAAAGTaGAACAACAAGCTGTCTATA +
Preference number: 3 (lower is better)
Translates to: GSHHFQWEARCPCSATNTPHIQK*NNKLSI
Trigger: TATAGACAGCTTGTTGTTCAACTTTTGGATGTGTGG...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATAGTTGCCTGTCATTTTaGGTAAAAGCTGCCAAATCC +
Preference number: 3 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHSCLSF*VKAAKS
Trigger: GGATTTGGCAGCTTTTACCAAAAATGACAGGCAACT...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp GGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTTCGGTaGCAGGCATCAATCACACCACAGCAAGATGTCATT +
Preference number: 3 (lower is better)
Translates to: GTRAVRRLCALR*QASITPQQDVI
Trigger: AATGACATCTTGCTGTGGTGTGATTGATGCCTGTCACCGAAGAGCACAGAGCCTCCTTACAGCTCTTGTGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR TCA 72 bp ACGAAAGCTTGCTGCCGGATGTCTGGTGGGATGTGCTaGCCACTGAGGCAAAGAGGCTTCAATTCTACAAAC +
Preference number: 3 (lower is better)
Translates to: TKACCRMSGGMC*PLRQRGFNSTN
Trigger: GTTTGTAGAATTGAAGCCTCTTTGCCTCAGTGGTCAGCACATCCCACCAGACATCCGGCAGCAAGCTTTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp CACCTGACCACAGTTCCCCATTGGTCAGCAAGACAATaGACTGAAATGGGCTCCCATCTGCTCTGTCTACCT +
Preference number: 3 (lower is better)
Translates to: HLTTVPHWSARQ*TEMGSHLLCLP
Trigger: AGGTAGACAGAGCAGATGGGAGCCCATTTCAGTTCATTGTCTTGCTGACCAATGGGGAACTGTGGTCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 72 bp AATCACCTGGCGTACTGTTCCAAGCACCCAAGTGCTTaGTTTGGCCCTTCCATTGACTTACCATGCCACCTT +
Preference number: 3 (lower is better)
Translates to: NHLAYCSKHPSA*FGPSIDLPCHL
Trigger: AAGGTGGCATGGTAAGTCAATGGAAGGGCCAAAGCAAGCACTTGGGTGCTTGGAACAGTACGCCAGGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 72 bp TGCCAGGCATTTCTCCGAGTCTCCAGCAGCCACAACTaGTGGGCAGTTAATGAGAAGATTCCCAAGACTCTA +
Preference number: 3 (lower is better)
Translates to: CQAFLRVSSSHN*WAVNEKIPKTL
Trigger: TAGAGTCTTGGGAATCTTCTCATTAACTGCCCAGCAGTTGTGGCTGCTGGAGACTCGGAGAAATGCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp CCATGTGCCCAGCATTCAGCACAGTTTCTAGCACGCTaGAGACACTGGACAGTATTGCGATGGAGGACTAAA +
Preference number: 3 (lower is better)
Translates to: PCAQHSAQFLAR*RHWTVLRWRTK
Trigger: TTTAGTCCTCCATCGCAATACTGTCCAGTGTCTCCAGCGTGCTAGAAACTGTGCTGAATGCTGGGCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp CAGTTCCCCATTGGTCAGCAAGACAATGAACTGAAATaGGCTCCCATCTGCTCTGTCTACCTGAAGCCACAG +
Preference number: 3 (lower is better)
Translates to: QFPIGQQDNELK*APICSVYLKPQ
Trigger: CTGTGGCTTCAGGTAGACAGAGCAGATGGGAGCCCATTTCAGTTCATTGTCTTGCTGACCAATGGGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp CGGCATGTACCAACCAGGCCACACAACAGCATAGAACTGAGGGGACCAAGCTTCGTTAATCGTCCTTTCTaGCTGGCAATATTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: RHVPTRPHNSIELRGPSFVNRPF*LAILLP
Trigger: AGGAAGCAATATTGCCAGCAAGAAAGGACGATTAAC...GAAGCTTGGTCCCCTCAGTTCTATGCTGTTGTGTGGCCTGGTTGGTACATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp GGGCAGAAGTACAAACCCACCATGTTCCTGCTAGGATaGCGACTAGTGGGAATGGGGAAATGCAAAGAGGAT +
Preference number: 3 (lower is better)
Translates to: GQKYKPTMFLLG*RLVGMGKCKED
Trigger: ATCCTCTTTGCATTTCCCCATTCCCACTAGTCGTCATCCTAGCAGGAACATGGTGGGTTTGTACTTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp TTGGTCACAAGGAGCAACAGTACGATCTGCTGTATCTaGAATGGGAAAGGCGCACAGAATCCTGGAAGGACT +
Preference number: 3 (lower is better)
Translates to: LVTRSNSTICCI*NGKGAQNPGRT
Trigger: AGTCCTTCCAGGATTCTGTGCGCCTTTCCCATTCCAGATACAGCAGATCGTACTGTTGCTCCTTGTGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR CCA 72 bp ACAAGGCTGAGAAGATTCTGCCTGGTCCCTCTTCGGTaGCAGGCAGTCTCAAGTTTTGTCAAATCCCTAAAG +
Preference number: 3 (lower is better)
Translates to: TRLRRFCLVPLR*QAVSSFVKSLK
Trigger: CTTTAGGGATTTGACAAAACTTGAGACTGCCTGCCACCGAAGAGGGACCAGGCAGAATCTTCTCAGCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp TGGGGTACAGAATTGTCCATGTGCTCCAGGACTAGTTaGGCTATGACAGACACCACAGATTGCTCTGCAACT +
Preference number: 3 (lower is better)
Translates to: WGTELSMCSRTS*AMTDTTDCSAT
Trigger: AGTTGCAGAGCAATCTGTGGTGTCTGTCATAGCCCAACTAGTCCTGGAGCACATGGACAATTCTGTACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGGCTGAGGCAGAAGAATaGCTTGAACCCGGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: LRGCELRAADGVYINHKQAEAEE*LEPGRR
Trigger: CCGCCTCCCGGGTTCAAGCAATTCTTCTGCCTCAGC...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 72 bp GGCGCACAGAATCCTGGAAGGACTGAAGACATCAGATaGTATGATAACAAGATGGAGAGTACGAGGGCACAA +
Preference number: 3 (lower is better)
Translates to: GAQNPGRTEDIR*YDNKMESTRAQ
Trigger: TTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTTCAGTCCTTCCAGGATTCTGTGCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR GCA 72 bp ACTAAAGGTAGCTTTCCTTCACATGACTCCTCTCTCTaGCACCCTCCCTTCGTTAACCTCTCTTACATGTGG +
Preference number: 3 (lower is better)
Translates to: TKGSFPSHDSSL*HPPFVNLSYMW
Trigger: CCACATGTAAGAGAGGTTAACGAAGGGAGGGTGGCAGAGAGAGGAGTCATGTGAAGGAAAGCTACCTTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 72 bp AGCCCACACTATTCAATGAAGTCTGATTGTAAAAGCTaGCTCCTCTCACCTGACCACAGTTCCCCATTGGTC +
Preference number: 3 (lower is better)
Translates to: SPHYSMKSDCKS*LLSPDHSSPLV
Trigger: GACCAATGGGGAACTGTGGTCAGGTGAGAGGAGGCAGCTTTTACAATCAGACTTCATTGAATAGTGTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp TTTCTAGCACGCTGGAGACACTGGACAGTATTGCGATaGAGGACTAAAGGTAGCTTTCCTTCACATGACTCC +
Preference number: 3 (lower is better)
Translates to: FLARWRHWTVLR*RTKGSFPSHDS
Trigger: GGAGTCATGTGAAGGAAAGCTACCTTTAGTCCTCCATCGCAATACTGTCCAGTGTCTCCAGCGTGCTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp CAGCATTCAGCACAGTTTCTAGCACGCTGGAGACACTaGACAGTATTGCGATGGAGGACTAAAGGTAGCTTT +
Preference number: 3 (lower is better)
Translates to: QHSAQFLARWRH*TVLRWRTKGSF
Trigger: AAAGCTACCTTTAGTCCTCCATCGCAATACTGTCCAGTGTCTCCAGCGTGCTAGAAACTGTGCTGAATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCCAAGATTCACCCATGTaGCAGCACATATCAGAATGT +
Preference number: 3 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIQDSPM*QHISEC
Trigger: ACATTCTGATATGTGCTGCAACATGGGTGAATCTTG...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR-3UTR CAA 90 bp AGGGCAATGTCTGACAGATACAACCAAGTTGGGGATGAATCGAAGAAGAGTTCTAACGAGGACAGGCGGTaGAGATCTCAGATGAACCAT +
Preference number: 3 (lower is better)
Translates to: RAMSDRYNQVGDESKKSSNEDRR*RSQMNH
Trigger: ATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTT...AGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp ATTATCCATATTCGGCCCCTTACATGGTACTGCTTGTaGGGATGTGGTGATCGATGGGCCTTCCTCAAACAA +
Preference number: 3 (lower is better)
Translates to: IIHIRPLTWYCL*GCGDRWAFLKQ
Trigger: TTGTTTGAGGAAGGCCCATCGATCACCACATCCTCACAAGCAGTACCATGTAAGGGGCCGAATATGGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR TCA 72 bp ACACGACATTTAGCACGGCTCAATGGCGGACACCACTaGCTTCCAATCGGATTTCACTTTTGTAACTGCCTT +
Preference number: 3 (lower is better)
Translates to: TRHLARLNGGHH*LPIGFHFCNCL
Trigger: AAGGCAGTTACAAAAGTGAAATCCGATTGGAAGTCAGTGGTGTCCGCCATTGAGCCGTGCTAAATGTCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp GAAGGACTGAAGACATCAGATGCTATGATAACAAGATaGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: EGLKTSDAMITR*RVRGHKSCKEA
Trigger: AGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTTCAGTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR CCA 72 bp AACTCCTTTTGTGACACGACATTTAGCACGGCTCAATaGCGGACACCACTGACTTCCAATCGGATTTCACTT +
Preference number: 3 (lower is better)
Translates to: NSFCDTTFSTAQ*RTPLTSNRISL
Trigger: AAGTGAAATCCGATTGGAAGTCAGTGGTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp GAAGATTCCCAAGACTCTACTGATCATTTGTTAACTTaGCAAAACAGGACTGGCAACAGTCGGGAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: EDSQDSTDHLLT*QNRTGNSREKL
Trigger: CAGCTTCTCCCGACTGTTGCCAGTCCTGTTTTGCCAAGTTAACAAATGATCAGTAGAGTCTTGGGAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp AAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTaGATACCTCTACACTGCAAGAATTCCTGGAACAGT +
Preference number: 3 (lower is better)
Translates to: KIDGRPNPCLLL*IPLHCKNSWNS
Trigger: ACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
3UTR GCA 72 bp TATTGTTCTGATTATTGGGGTACAGAATTGTCCATGTaGTCCAGGACTAGTTGGGCTATGACAGACACCACA +
Preference number: 3 (lower is better)
Translates to: YCSDYWGTELSM*SRTSWAMTDTT
Trigger: TGTGGTGTCTGTCATAGCCCAACTAGTCCTGGAGCACATGGACAATTCTGTACCCCAATAATCAGAACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp GTCCTAAAAAGACACATCCGGAAACTGCCATCATTATaGGGTTTTGTTACAAGGAAACAGCAGCCCACACTA +
Preference number: 3 (lower is better)
Translates to: VLKRHIRKLPSL*GFVTRKQQPTL
Trigger: TAGTGTGGGCTGCTGTTTCCTTGTAACAAAACCCCATAATGATGGCAGTTTCCGGATGTGTCTTTTTAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CCA 72 bp TCTGAACACACTGTAATAGAGTTCCAGAGATCTCCATaGGATTCTTATCAAAGGCTATTCCCTGAGACAGGC +
Preference number: 3 (lower is better)
Translates to: SEHTVIEFQRSP*DSYQRLFPETG
Trigger: GCCTGTCTCAGGGAATAGCCTTTGATAAGAATCCCATGGAGATCTCTGGAACTCTATTACAGTGTGTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGGCCCTAGGTGGAGGTTaGGGACAAATATGGTATTTG +
Preference number: 3 (lower is better)
Translates to: LRGCELRAADGVYINHKQALGGG*GQIWYL
Trigger: CAAATACCATATTTGTCCCAAACCTCCACCTAGGGC...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAAGCCCTAGGTGGAGGTTaGGGACAAATATGGTATTTG +
Preference number: 3 (lower is better)
Translates to: PSISRSFSSFHLKLCTHEALGGG*GQIWYL
Trigger: CAAATACCATATTTGTCCCAAACCTCCACCTAGGGC...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR-3UTR CAA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACGAAGAGTTCTTGCATTaGCCAGGCATTTCTCCGAGT +
Preference number: 3 (lower is better)
Translates to: HRKQTLQIQINRREGEKNEEFLH*PGISPS
Trigger: ACTCGGAGAAATGCCTGGCAAATGCAAGAACTCTTC...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp GGTGGGAGAGGAGCTAATTGCATCGGTACTATCATATaGCTAAAGCAGGATGAATGGTTTACAAGTCAGAAC +
Preference number: 3 (lower is better)
Translates to: GGRGANCIGTII*LKQDEWFTSQN
Trigger: GTTCTGACTTGTAAACCATTCATCCTGCTTTAGTCATATGATAGTACCGATGCAATTAGCTCCTCTCCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR TCA 72 bp GCTGGGCAGTTAATGAGAAGATTCCCAAGACTCTACTaGTCATTTGTTAACTTGGCAAAACAGGACTGGCAA +
Preference number: 3 (lower is better)
Translates to: AGQLMRRFPRLY*SFVNLAKQDWQ
Trigger: TTGCCAGTCCTGTTTTGCCAAGTTAACAAATGATCAGTAGAGTCTTGGGAATCTTCTCATTAACTGCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 72 bp GCAGTGAGGCTTGAAATGACCATATCTAATGCTCACTaGATTCCAGAAAAAGGCAACAGACAACAGTCAATC +
Preference number: 3 (lower is better)
Translates to: AVRLEMTISNAH*IPEKGNRQQSI
Trigger: GATTGACTGTTGTCTGTTGCCTTTTTCTGGAATGCAGTGAGCATTAGATATGGTCATTTCAAGCCTCACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAAAGCAGTTCTCTCTGTTaGACTTGCAGAAGGCAATCT +
Preference number: 3 (lower is better)
Translates to: PSISRSFSSFHLKLCTHESSSLC*TCRRQS
Trigger: AGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCT...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR TCA 72 bp GTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTaGGTGGGACACCTTTATTCAGACAAATCAGATACT +
Preference number: 3 (lower is better)
Translates to: VNTSTLQEFLEQ*VGHLYSDKSDT
Trigger: AGTATCTGATTTGTCTGAATAAAGGTGTCCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
3UTR CCA 72 bp CTGTGTAGTCCAGCTCATGGCATTGTAAGGATCAAATaGCATGCTGTATGCAAAAGGTCTTTGGAATCTATA +
Preference number: 3 (lower is better)
Translates to: LCSPAHGIVRIK*HAVCKRSLESI
Trigger: TATAGATTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGCTGGACTACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAACACTCTGTACAAATTaGGTATTGACCAGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTTLCTN*VLTRRQ
Trigger: CTGCCTCCTGGTCAATACCAAATTTGTACAGAGTGT...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR CAA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGACAGATACAACCAAGTaGGGGATGAATCGAAGAAGA +
Preference number: 3 (lower is better)
Translates to: LRGCELRAADGVYINHKQTDTTK*GMNRRR
Trigger: TCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGT...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp AAAGAGGCTAGTAAGCCAGAAGAACACAGATGTTCCTaGAACTCTTCTTGCAGTTGCTTTAGGGTTAAAGAT +
Preference number: 3 (lower is better)
Translates to: KEASKPEEHRCS*NSSCSCFRVKD
Trigger: ATCTTTAACCCTAAAGCAACTGCAAGAAGAGTTTCAGGAACATCTGTGTTCTTCTGGCTTACTAGCCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR CCA 72 bp AAAAAGGGTCCATGTCTATTTGTGTTACAACCTATATaGGGGAAATCTGACCATTTGCTTATAGGCAAACCC +
Preference number: 3 (lower is better)
Translates to: KKGPCLFVLQPI*GKSDHLLIGKP
Trigger: GGGTTTGCCTATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGGACCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR CAA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACTTTAGAGCTTACCCTTaGAGGAATAGTATACTGAAG +
Preference number: 3 (lower is better)
Translates to: HRKQTLQIQINRREGEKNFRAYP*RNSILK
Trigger: CTTCAGTATACTATTCCTCAAAGGGTAAGCTCTAAA...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp GCAGATGGTGTGTATATAAACCATAAGCAGCAACTATaGCCTCAAATGATTTTAACACCAAGGAACTCTGCA +
Preference number: 3 (lower is better)
Translates to: ADGVYINHKQQL*PQMILTPRNSA
Trigger: TGCAGAGTTCCTTGGTGTTAAAATCATTTGAGGTCATAGTTGCTGCTTATGGTTTATATACACACCATCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 72 bp ATCCACTTTAAGTTGCCTGTCATTTTTGGTAAAAGCTaGCAAATCCATCTGATTATCTCCTCTAACTATGCC +
Preference number: 3 (lower is better)
Translates to: IHFKLPVIFGKS*QIHLIISSNYA
Trigger: GGCATAGTTAGAGGAGATAATCAGATGGATTTGGCAGCTTTTACCAAAAATGACAGGCAACTTAAAGTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR TCA 72 bp TGGAGGGCAAATATTACTCAGTACATACGTGATTGTTaGTACTTGTGCTGTTTTGACCCATTTGCAAAAGTT +
Preference number: 3 (lower is better)
Translates to: WRANITQYIRDC*YLCCFDPFAKV
Trigger: AACTTTTGCAAATGGGTCAAAACAGCACAAGTATCAACAATCACGTATGTACTGAGTAATATTTGCCCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR GCA 72 bp AACTCTAGTAATTACCTACAGCTATCCACTTTAAGTTaGCTGTCATTTTTGGTAAAAGCTGCCAAATCCATC +
Preference number: 3 (lower is better)
Translates to: NSSNYLQLSTLS*LSFLVKAAKSI
Trigger: GATGGATTTGGCAGCTTTTACCAAAAATGACAGGCAACTTAAAGTGGATAGCTGTAGGTAATTACTAGAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR-3UTR CAA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAAGGATAAATGAATACTaGGGTAAAGAGGCTAGTAAG +
Preference number: 3 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIRINEY*GKEASK
Trigger: CTTACTAGCCTCTTTACCCAAGTATTCATTTATCCT...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR-3UTR CAA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACCTATTAGTCTTGATCTaGTCTCATCTTAACCATTGC +
Preference number: 3 (lower is better)
Translates to: VNITSFLFPYPKSSANSHLLVLI*SHLNHC
Trigger: GCAATGGTTAAGATGAGACAAGATCAAGACTAATAG...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR GCA 72 bp AAAACACTCCATACTTTACATTTCCTAAGTAAACTTTaGCTTGACTGTCCACTCAAGAGTCAAGATACACTT +
Preference number: 3 (lower is better)
Translates to: KTLHTLHFLSKL*LDCPLKSQDTL
Trigger: AAGTGTATCTTGACTCTTGAGTGGACAGTCAAGGCAAAGTTTACTTAGGAAATGTAAAGTATGGAGTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTGAAGCTAGGGTCGGCTaGGCGCAGTGGCTCGAACCT +
Preference number: 4 (lower is better)
Translates to: GSHHFQWEARCPCSATNTEARVG*AQWLEP
Trigger: AGGTTCGAGCCACTGCGCCCAGCCGACCCTAGCTTC...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTAGCGCTCGATCTGCTTaGGCACCGGCTGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GSHHFQWEARCPCSATNTSARSA*APAASA
Trigger: TGCTGAAGCAGCCGGTGCCCAAGCAGATCGAGCGCT...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CGGCATGTACCAACCAGGCCACACAACAGCATAGAACTGAGGGGACCAAGCTTCGGATCTGTCTCCCAATaGGACCCGGCCACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RHVPTRPHNSIELRGPSFGSVSQ*DPATPR
Trigger: CCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATCC...GAAGCTTGGTCCCCTCAGTTCTATGCTGTTGTGTGGCCTGGTTGGTACATGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATGACCCACCTGAAGCCACAGTGTaGGGACCTCGACAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PIPKTLTRSSDLWASYDPPEATV*GPRQGP
Trigger: GGGACCCTGTCGAGGTCCCCACACTGTGGCTTCAGG...TGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTCAGGGTGGAGCTTGGTaGATACAGCAAGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GSHHFQWEARCPCSATNTQGGAW*IQQGCH
Trigger: GTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTG...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATGACCCACAGGGCATGGCCACCTaGTGTCTTCCACTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PIPKTLTRSSDLWASYDPQGMAT*CLPLSG
Trigger: CCCTGAAAGTGGAAGACATCAGGTGGCCATGCCCTG...TGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp GGAGAAGCTGGGCACACTCTGCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCCTGCCTCCTCTCACCTaGCCACAGTTCCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: GEAGHTLRVHVSRKTRTGLPPLT*PQFPIG
Trigger: ACCAATGGGGAACTGTGGTCAGGTGAGAGGAGGCAG...GCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATACCAACCTGTGGACTTaGGAGGGAGGCCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHTNLWT*EGGLPR
Trigger: TCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGT...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCATTAGGGAAAGGCACTaGCCAGGGTGGAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLIRERH*PGWSLV
Trigger: CACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAAT...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCAGTGTGCTTTGGTGGTaGGCTCCAGGTCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLSVLWW*APGLQT
Trigger: GGTTTGGAGACCTGGAGCCCACCACCAAAGCACACT...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GGAGAAGCTGGGCACACTCTGCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCCAGCACCCCCTAAACTaGTGCCTCCTCTCTCCTACA +
Preference number: 4 (lower is better)
Translates to: GEAGHTLRVHVSRKTRTGQHPLN*CLLSPT
Trigger: TGTAGGAGAGAGGAGGCAGCAGTTTAGGGGGTGCTG...GCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTGGCACACTCTGCGCGTaGATGTTTCCAGAAAAACGA +
Preference number: 4 (lower is better)
Translates to: GSHHFQWEARCPCSATNTGTLCA*MFPEKR
Trigger: TCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCC...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATGTGACGAAAGCTTGCTaGCGGATGTCTGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHVTKAC*RMSGGM
Trigger: CATCCCACCAGACATCCGGCAGCAAGCTTTCGTCAC...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATAAGGTGACGAAAGCTTaGTGCCGGATGTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHKVTKA*CRMSGG
Trigger: CCCACCAGACATCCGGCAGCAAGCTTTCGTCACCTT...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGGTGGCCGCAAGGGCTaGCGCAGCCAAGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: QIPACCCEYLYTARIPGTGGRKG*RSQAAR
Trigger: CCGTGCGGCTTGGCTGCGCCAGCCCTTGCGGCCACC...TGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp GATCTGTCTCCCAATGGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTACGATCTGCTGTATCTaGAATGGGAAAGGCGCACAG +
Preference number: 4 (lower is better)
Translates to: DLSPNGTRPPPGQRIQQCTICCI*NGKGAQ
Trigger: CTGTGCGCCTTTCCCATTCCAGATACAGCAGATCGT...ACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GGAGAAGCTGGGCACACTCTGCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCGCACGCTGGAGACACTaGACAGTATTGCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: GEAGHTLRVHVSRKTRTGARWRH*TVLRWR
Trigger: CCTCCATCGCAATACTGTCCAGTGTCTCCAGCGTGC...GCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCTTTAGCACGGCTCAATaGCGGACACCACTGACTTCC +
Preference number: 4 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLFSTAQ*RTPLTS
Trigger: GGAAGTCAGTGGTGTCCGCCATTGAGCCGTGCTAAA...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GATCTGTCTCCCAATGGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTCTGGCGCTTTGGCATTaGATTCTTCAACTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DLSPNGTRPPPGQRIQQCLALWH*ILQLPA
Trigger: AGCTGGAAGTTGAAGAATTCAATGCCAAAGCGCCAG...ACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATGACCCACTCTGTGCTCTTCGGTaGCAGGCATCAATCACACCA +
Preference number: 4 (lower is better)
Translates to: PIPKTLTRSSDLWASYDPLCALR*QASITP
Trigger: TGGTGTGATTGATGCCTGTCACCGAAGAGCACAGAG...TGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp GGAGAAGCTGGGCACACTCTGCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCCTTGTGAGGATGTGGTaGTCGATGGGCCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GEAGHTLRVHVSRKTRTGLVRMW*SMGLPQ
Trigger: TTGAGGAAGGCCCATCGATCACCACATCCTCACAAG...GCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATGGGGTCAGATGGATGTaGGTAAGCCAAAAAGCGTGC +
Preference number: 4 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHGVRWM*VSQKAC
Trigger: GCACGCTTTTTGGCTTACTCACATCCATCTGACCCC...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CGGCATGTACCAACCAGGCCACACAACAGCATAGAACTGAGGGGACCAAGCTTCGGTCCCCTACAAAGTTaGGTGCAGAGCCAGACACAG +
Preference number: 4 (lower is better)
Translates to: RHVPTRPHNSIELRGPSFGPLQS*VQSQTQ
Trigger: CTGTGTCTGGCTCTGCACTCAACTTTGTAGGGGACC...GAAGCTTGGTCCCCTCAGTTCTATGCTGTTGTGTGGCCTGGTTGGTACATGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACCGGATAGGGCACGTTTaGGAAGCGCGCACCCCGGCC +
Preference number: 4 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHRIGHV*EARTPA
Trigger: GGCCGGGGTGCGCGCTTCGCAAACGTGCCCTATCCG...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTCAATGGGAGGCACGTTaGCCCTGCAGCGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: RQANLYQRGSHHFQWEARQWEAR*PCSATN
Trigger: GTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTG...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTACAGAATTGTCCATGTaGTCCAGGACTAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GSHHFQWEARCPCSATNTTELSM*SRTSWA
Trigger: AGCCCAACTAGTCCTGGAGCACATGGACAATTCTGT...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp ATAAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGGTGGCCGCAAGGGCTaGCGCAGCCAAGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: IKLMAGQIPACCCEYLYTGGRKG*RSQAAR
Trigger: CCGTGCGGCTTGGCTGCGCCAGCCCTTGCGGCCACC...AGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
3UTR CAA 72 bp TCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTaGCCCCTGCAGCGCCACCAACACTTAAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SKRKSPLPMGGT*PLQRHQHLRGK
Trigger: CTTTCCCCTTAAGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTCATATGAAACAGATGTaGGGGCACATAAACCACCTG +
Preference number: 4 (lower is better)
Translates to: GSHHFQWEARCPCSATNTHMKQM*GHINHL
Trigger: CAGGTGGTTTATGTGCCCTCACATCTGTTTCATATG...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GATCTGTCTCCCAATGGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTGCAGTTCTCTCTGTTTaGCTTGCAGAAGGCAATCTT +
Preference number: 4 (lower is better)
Translates to: DLSPNGTRPPPGQRIQQCAVLSV*LAEGNL
Trigger: AAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGC...ACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CAAACAAGAGAAACGCTGTCAGAGTCAGGCAGTAGGCAGCACCCCCTAAACTGCGACTGGTGGATCACTTaGGGTCGGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: QTRETLSESGSRQHPLNCDWWIT*GREFET
Trigger: GGTCTCAAACTCCCGACCTCAAGTGATCCACCAGTC...GCAGTTTAGGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATCTCCAGGGCAATGTCTaGCAGATACAACCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHLQGNV*QIQPSW
Trigger: CCAACTTGGTTGTATCTGTCAGACATTGCCCTGGAG...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCTTTCCTTTTGGGGGATaGACACAGCTGATACCAACC +
Preference number: 4 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLFPFGG*TQLIPT
Trigger: GGTTGGTATCAGCTGTGTTCATCCCCCAAAAGGAAA...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATCATCCCTGGGTTCACTaGTGGGATTGCTCCAATCAT +
Preference number: 4 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHHPWVH*WDCSNH
Trigger: ATGATTGGAGCAATCCCAGCAGTGAACCCAGGGATG...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATGACCCAGGATGTGGTGATCGATaGGCCTTCCTCAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: PIPKTLTRSSDLWASYDPGCGDR*AFLKQE
Trigger: CTCTTGTTTGAGGAAGGCCCATCGATCACCACATCC...TGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR CAA 72 bp ACCTGGCGTACTGTTCCAAGCACCCAAGTGCTTGCTTaGGCCCTTCCATTGACTTACCATGCCACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TWRTVPSTQVLA*ALPLTYHATLA
Trigger: TGCCAAGGTGGCATGGTAAGTCAATGGAAGGGCCAAAGCAAGCACTTGGGTGCTTGGAACAGTACGCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 72 bp ACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTaGGTGCATACAGCAAGGCTGTCACTAGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TDIRERHCPGWS*VHTARLSLVLL
Trigger: AAGGAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCCACCACATCTCACAATaGGAATCCGATCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLHHISQ*ESDQME
Trigger: TTCCATCTGATCGGATTCTCATTGTGAGATGTGGTG...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CGGCATGTACCAACCAGGCCACACAACAGCATAGAACTGAGGGGACCAAGCTTCGTTCACTGCTGGGATTaGTCCAATCATCGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RHVPTRPHNSIELRGPSFVHCWD*SNHRLQ
Trigger: CTGAAGCCGATGATTGGAGCAATCCCAGCAGTGAAC...GAAGCTTGGTCCCCTCAGTTCTATGCTGTTGTGTGGCCTGGTTGGTACATGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACCTGGGAGGCGGAGGTTaGAGTGAGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHLGGGG*SEPRWC
Trigger: GCACCATCTCGGCTCACTGCAACCTCCGCCTCCCAG...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CGGCATGTACCAACCAGGCCACACAACAGCATAGAACTGAGGGGACCAAGCTTCCTGCTGTATCTGGAATaGGAAAGGCGCACAGAATCC +
Preference number: 4 (lower is better)
Translates to: RHVPTRPHNSIELRGPSFLLYLE*ERRTES
Trigger: GGATTCTGTGCGCCTTTCCCATTCCAGATACAGCAG...GAAGCTTGGTCCCCTCAGTTCTATGCTGTTGTGTGGCCTGGTTGGTACATGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTCTGCCGGATGTCTGGTaGGATGTGCTGACCACTGAG +
Preference number: 4 (lower is better)
Translates to: RQANLYQRGSHHFQWEARLPDVW*DVLTTE
Trigger: CTCAGTGGTCAGCACATCCCACCAGACATCCGGCAG...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTTGGACAGTATTGCGATaGAGGACTAAAGGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: GSHHFQWEARCPCSATNTWTVLR*RTKGSF
Trigger: AAAGCTACCTTTAGTCCTCCATCGCAATACTGTCCA...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GAAGCAGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTGGGCTGGTCCCTCTTCGGTaGCAGGCAGTCTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: EAGPEERNQLWSRSHKCGLVPLR*QAVSSF
Trigger: AAAACTTGAGACTGCCTGCCACCGAAGAGGGACCAG...CCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 72 bp GAAAGTGGGTTCATGAGGCAGGGATTTCTGTCTGCTTaGACCCCTGCCATGTGCCCAGCATTCAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: ESGFMRQGFLSA*TPAMCPAFSTV
Trigger: AACTGTGCTGAATGCTGGGCACATGGCAGGGGTCAAAGCAGACAGAAATCCCTGCCTCATGAACCCACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GATCTGTCTCCCAATGGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTAACTCAAATAGCATATaGAACAGATGTGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: DLSPNGTRPPPGQRIQQCNSNSI*NRCEGT
Trigger: TGTGCCCTCACATCTGTTTCATATGCTATTTGAGTT...ACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GAAGCAGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTGGGGGATGTGCTGACCACTaGGGCAAAGAGGCTTCAATT +
Preference number: 4 (lower is better)
Translates to: EAGPEERNQLWSRSHKCGGCADH*GKEASI
Trigger: AATTGAAGCCTCTTTGCCTCAGTGGTCAGCACATCC...CCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CAGAAAAACGAGGACAGGCGGTTGAGATCTCAGATGAACCATGTGTGTTCATCCTCTGGTGGGATGTGCTaGCCACTGAGGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QKNEDRRLRSQMNHVCSSSGGMC*PLRQRG
Trigger: GCCTCTTTGCCTCAGTGGTCAGCACATCCCACCAGA...GGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CATAATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTCGGATAGGGCACGTTTaGGAAGCGCGCACCCCGGCC +
Preference number: 4 (lower is better)
Translates to: HNDFKIHPCCSTYQNVLPRIGHV*EARTPA
Trigger: GGCCGGGGTGCGCGCTTCGCAAACGTGCCCTATCCG...AGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR GCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTCCGGGAGGCGGAGGTTaGAGTGAGCAGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFPGGGG*SEQRSH
Trigger: GTGTGATCTCTGCTCACTGCAACCTCCGCCTCCCGG...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACGGTGGCCGCAAGGGCTaGCGCAGCCAAGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: VNITSFLFPYPKSSANSHGGRKG*RSQAAR
Trigger: CCGTGCGGCTTGGCTGCGCCAGCCCTTGCGGCCACC...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCCCCTGGGTTCACTGCTaGGATTGCTCCAATCATCGG +
Preference number: 4 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIPWVHC*DCSNHR
Trigger: CCGATGATTGGAGCAATCCCAGCAGTGAACCCAGGG...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCACAGGAAAAACTCTTTaGGAAAGTCCAGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLTGKTL*ESPGGR
Trigger: TCTACCACCTGGACTTTCCCAAAGAGTTTTTCCTGT...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CTGATACCAACCTGTGGACTTGAGAGGGAGGCCTTCCCAGATTATCCTTTCCTCTATGGGAGGCTGAGGTaGGTAGGTCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LIPTCGLEREAFPDYPFLYGRLR*VGHLRS
Trigger: TGACCTCAAGTGACCTACCCACCTCAGCCTCCCATA...GAGGAAAGGATAATCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACACAGTCGGGAGAAGCTaGGCACACTCTGCGCGTGCA +
Preference number: 4 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHTVGRS*AHSARA
Trigger: TGCACGCGCAGAGTGTGCCCAGCTTCTCCCGACTGT...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATAACCTCTCTTACATGTaGGTACCGGTCTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHNLSYM*VPVFKS
Trigger: AGACTTGAAGACCGGTACCCACATGTAAGAGAGGTT...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGCCTATGGGCTTCCTATaGCCCACCTCTCACCAGTCT +
Preference number: 4 (lower is better)
Translates to: ACCCEYLYTARIPGTVSGPMGFL*PTSHQS
Trigger: AGACTGGTGAGAGGTGGGTCATAGGAAGCCCATAGG...CCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp GATCTGTCTCCCAATGGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTAGTATCGTTGGAAATTaGGGCCTAGGAAGATATTAT +
Preference number: 4 (lower is better)
Translates to: DLSPNGTRPPPGQRIQQCSIVGN*GLGRYY
Trigger: ATAATATCTTCCTAGGCCTCAATTTCCAACGATACT...ACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCCACTTTCACAGCTCCTaGCTTGAACTTCCATATTTT +
Preference number: 4 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLHFHSS*LELPYF
Trigger: AAAATATGGAAGTTCAAGTCAGGAGCTGTGAAAGTG...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTAGTGCTCCTGCCCTCTaGCCCACACATCCAAAAGTT +
Preference number: 4 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSSAPAL*PTHPKV
Trigger: AACTTTTGGATGTGTGGGTCAGAGGGCAGGAGCACT...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GAAGCAGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTGGGAGCAAGACAATGAACTaGAATGGGCTCCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: EAGPEERNQLWSRSHKCGSKTMN*NGLPSA
Trigger: AGCAGATGGGAGCCCATTTCAGTTCATTGTCTTGCT...CCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACACGGATAGGGCACGTTTaGGAAGCGCGCACCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTRIGHV*EARTPA
Trigger: GGCCGGGGTGCGCGCTTCGCAAACGTGCCCTATCCG...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR GCA 90 bp ATAAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTTGCTTGGGCACCGGCTaGTTCAGCAGCCACCGGAAC +
Preference number: 4 (lower is better)
Translates to: IKLMAGQIPACCCEYLYTCLGTG*FSSHRN
Trigger: GTTCCGGTGGCTGCTGAAGCAGCCGGTGCCCAAGCA...AGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR GCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTCATGACTCCTCTCTCTaGCACCCTCCCTTCGTTAAC +
Preference number: 4 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSHDSSL*HPPFVN
Trigger: GTTAACGAAGGGAGGGTGGCAGAGAGAGGAGTCATG...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTTTGACCCCTGCCATGTaGCCAGCATTCAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSLTPAM*PAFSTV
Trigger: AACTGTGCTGAATGCTGGGCACATGGCAGGGGTCAA...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CGGCATGTACCAACCAGGCCACACAACAGCATAGAACTGAGGGGACCAAGCTTCCCCTACAAAGTTGAGTaGAGAGCCAGACACAGAAAA +
Preference number: 4 (lower is better)
Translates to: RHVPTRPHNSIELRGPSFPYKVE*RARHRK
Trigger: TTTTCTGTGTCTGGCTCTGCACTCAACTTTGTAGGG...GAAGCTTGGTCCCCTCAGTTCTATGCTGTTGTGTGGCCTGGTTGGTACATGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GAAGCAGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTGGGTCTGATTGTAAAAGCTaGCTCCTCTCACCTGACCAC +
Preference number: 4 (lower is better)
Translates to: EAGPEERNQLWSRSHKCGSDCKS*LLSPDH
Trigger: GTGGTCAGGTGAGAGGAGGCAGCTTTTACAATCAGA...CCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CAAACAAGAGAAACGCTGTCAGAGTCAGGCAGTAGGCAGCACCCCCTAAACTGCCAGGCGTGGACGCGATaGTTTCATATACATTCTCTC +
Preference number: 4 (lower is better)
Translates to: QTRETLSESGSRQHPLNCQAWTR*FHIHSL
Trigger: GAGAGAATGTATATGAAAGCATCGCGTCCACGCCTG...GCAGTTTAGGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGCCCTGGGTTCACTGCTaGGATTGCTCCAATCATCGG +
Preference number: 4 (lower is better)
Translates to: ACCCEYLYTARIPGTVSGPWVHC*DCSNHR
Trigger: CCGATGATTGGAGCAATCCCAGCAGTGAACCCAGGG...CCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTTCCCAGGGCCCTAGGTaGAGGTTTGGGACAAATATG +
Preference number: 4 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSSQGPR*RFGTNM
Trigger: CATATTTGTCCCAAACCTCCACCTAGGGCCCTGGGA...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCTCCCAGGGCCCTAGGTaGAGGTTTGGGACAAATATG +
Preference number: 4 (lower is better)
Translates to: CNQATCSWSKHTSSQGEISQGPR*RFGTNM
Trigger: CATATTTGTCCCAAACCTCCACCTAGGGCCCTGGGA...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp GGAAGTCACCACTTCCAATGGGAGGCACGTTGCCCCTGCAGCGCCACCAACACTTATGCAAAAGGTCTTTaGAATCTATACACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSHHFQWEARCPCSATNTYAKGL*NLYTRL
Trigger: CAGCCTTGTGTATAGATTCCAAAGACCTTTTGCATA...AGTGTTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CAGAAAAACGAGGACAGGCGGTTGAGATCTCAGATGAACCATGTGTGTTCATCCCTCAGTGTGCTTTGGTaGTGGGCTCCAGGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: QKNEDRRLRSQMNHVCSSLSVLW*WAPGLQ
Trigger: TTGGAGACCTGGAGCCCACCACCAAAGCACACTGAG...GGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTAGTCACCACTTCCAATaGGAGGCACGTTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFSHHFQ*EARCPC
Trigger: GCAGGGGCAACGTGCCTCCCATTGGAAGTGGTGACT...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 72 bp GCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCGGTaGAGATCTCAGATGAACCATGTGTGTTCATCCCCT +
Preference number: 4 (lower is better)
Translates to: ARACFQKNEDRR*RSQMNHVCSSP
Trigger: AGGGGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTGGAAACATGCACGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAGTCCAGGAATTGTTTaGTGGAGAGCGGCGACGGCG +
Preference number: 4 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCSPGIV*WRAATA
Trigger: CGCCGTCGCCGCTCTCCATCAAACAATTCCTGGACT...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp CAAACAAGAGAAACGCTGTCAGAGTCAGGCAGTAGGCAGCACCCCCTAAACTGCCCTATGTGTTTAGGATaGACAGGATTAGTGTCACCC +
Preference number: 4 (lower is better)
Translates to: QTRETLSESGSRQHPLNCPMCLG*TGLVSP
Trigger: GGGTGACACTAATCCTGTTCATCCTAAACACATAGG...GCAGTTTAGGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp CAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACACAGGGCATGGCCACCTaGTGTCTTCCACTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QIPACCCEYLYTARIPGTQGMAT*CLPLSG
Trigger: CCCTGAAAGTGGAAGACATCAGGTGGCCATGCCCTG...TGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp CCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATGACCCATATGGAAAATTACCATaGAGAGAAGCACATCCTGTG +
Preference number: 4 (lower is better)
Translates to: PIPKTLTRSSDLWASYDPYGKLP*REAHPV
Trigger: CACAGGATGTGCTTCTCTTCATGGTAATTTTCCATA...TGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCACATGGTACTGCTTGTaGGGATGTGGTGATCGATGG +
Preference number: 4 (lower is better)
Translates to: CNQATCSWSKHTSSQGEITWYCL*GCGDRW
Trigger: CCATCGATCACCACATCCTCACAAGCAGTACCATGT...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp CAGAAAAACGAGGACAGGCGGTTGAGATCTCAGATGAACCATGTGTGTTCATCCATGGAGGAACTGTCATaGGGAGCCACCTGTGTCACA +
Preference number: 4 (lower is better)
Translates to: QKNEDRRLRSQMNHVCSSMEELS*GATCVT
Trigger: TGTGACACAGGTGGCTCCTCATGACAGTTCCTCCAT...GGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTAGTCATCCTTCATCATaGCGGCATGTACCAACCAGG +
Preference number: 4 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSSHPSS*RHVPTR
Trigger: CCTGGTTGGTACATGCCGTCATGATGAAGGATGACT...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp ATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCACCCCCTAAACTGCTaGCTCCTCTCTCCTACAGTG +
Preference number: 4 (lower is better)
Translates to: MAGQIPACCCEYLYTARIHPLNC*LLSPTV
Trigger: CACTGTAGGAGAGAGGAGGCAGCAGTTTAGGGGGTG...AATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR GCA 90 bp ACTTATTGCAAAGCCAGGCGTGGACGCGATGCTTTCATATACATTCTCTCTCCTAGGCTGAGAAGATTCTaGCTGGTCCCTCTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: TYCKARRGRDAFIYILSPRLRRF*LVPLRW
Trigger: CCACCGAAGAGGGACCAGGCAGAATCTTCTCAGCCT...AGGAGAGAGAATGTATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAATAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CTGATACCAACCTGTGGACTTGAGAGGGAGGCCTTCCCAGATTATCCTTTCCTCCACCACAGATTGCTCTaGAACTTCCGGGGAACATTA +
Preference number: 4 (lower is better)
Translates to: LIPTCGLEREAFPDYPFLHHRLL*NFRGTL
Trigger: TAATGTTCCCCGGAAGTTGCAGAGCAATCTGTGGTG...GAGGAAAGGATAATCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTCCGCCACGTTACAGGTaGGATCGATACTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSPPRYR*DRYFLC
Trigger: ACATAGGAAGTATCGATCCCACCTGTAACGTGGCGG...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp ATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCATCGGCTTCAGGCGTaGTCTTGTAATGGCGCCATG +
Preference number: 4 (lower is better)
Translates to: MAGQIPACCCEYLYTARIHRLQA*SCNGAM
Trigger: CATGGCGCCATTACAAGACCACGCCTGAAGCCGATG...AATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp TGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGACACATCGGCTTCAGGCGTaGTCTTGTAATGGCGCCATG +
Preference number: 4 (lower is better)
Translates to: CCCEYLYTARIPGTVSGTHRLQA*SCNGAM
Trigger: CATGGCGCCATTACAAGACCACGCCTGAAGCCGATG...TGTCCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTCCCTGGGTTCACTGCTaGGATTGCTCCAATCATCGG +
Preference number: 4 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFPWVHC*DCSNHR
Trigger: CCGATGATTGGAGCAATCCCAGCAGTGAACCCAGGG...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCCTGCTGTATCTGGAATaGGAAAGGCGCACAGAATCC +
Preference number: 4 (lower is better)
Translates to: CNQATCSWSKHTSSQGEILLYLE*ERRTES
Trigger: GGATTCTGTGCGCCTTTCCCATTCCAGATACAGCAG...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp GATCTGTCTCCCAATGGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTACTGAAACATTTATATaGACATTAAAACGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: DLSPNGTRPPPGQRIQQCTETFI*TLKRGR
Trigger: TCTGCCCCGTTTTAATGTCCATATAAATGTTTCAGT...ACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCCAAGCCACATGCAGCTaGTCAAAGCACACCTCATCT +
Preference number: 4 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIQATCS*SKHTSS
Trigger: AGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTG...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCGAAGCTAGGGTCGGCTaGGCGCAGTGGCTCGAACCT +
Preference number: 4 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCEARVG*AQWLEP
Trigger: AGGTTCGAGCCACTGCGCCCAGCCGACCCTAGCTTC...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp GGAGAAGCTGGGCACACTCTGCGCGTGCATGTTTCCAGAAAAACGAGGACAGGCGCTCTACAGATAATTTaGGGTTTAGAGCTTACCCTT +
Preference number: 4 (lower is better)
Translates to: GEAGHTLRVHVSRKTRTGALQII*GLELTL
Trigger: AAGGGTAAGCTCTAAACCCCAAATTATCTGTAGAGC...GCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTTGCTCCAGGACTAGTTaGGCTATGACAGACACCACA +
Preference number: 4 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSCSRTS*AMTDTT
Trigger: TGTGGTGTCTGTCATAGCCCAACTAGTCCTGGAGCA...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp TGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGACATTCGTCGCTAGCCCCTaGCAACCTCCCTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: CCCEYLYTARIPGTVSGTFVASP*QPPFHF
Trigger: AAAGTGGAAGGGAGGTTGCCAGGGGCTAGCGACGAA...TGTCCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp GCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGCCCTGCTTGCTGTTGTaGATACCTCTACACTGCAAG +
Preference number: 4 (lower is better)
Translates to: ACCCEYLYTARIPGTVSGPCLLL*IPLHCK
Trigger: CTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGG...CCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp GCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGACATGGTACTGCTTGTaGGGATGTGGTGATCGATGG +
Preference number: 4 (lower is better)
Translates to: ACCCEYLYTARIPGTVSGTWYCL*GCGDRW
Trigger: CCATCGATCACCACATCCTCACAAGCAGTACCATGT...CCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp ATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTGGGGTCAGATGGATGTaGGTAAGCCAAAAAGCGTGC +
Preference number: 4 (lower is better)
Translates to: MAGQIPACCCEYLYTARIGVRWM*VSQKAC
Trigger: GCACGCTTTTTGGCTTACTCACATCCATCTGACCCC...AATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp AGGGCAATGTCTGACAGATACAACCAAGTTGGGGATGAATCGAAGAAGAGTTCTGATTTCTGTCTGCTTTaGCCCCTGCCATGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RAMSDRYNQVGDESKKSSDFCLL*PLPCAQ
Trigger: CTGGGCACATGGCAGGGGTCAAAGCAGACAGAAATC...AGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp ATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTTTTTCTGGGAGGCGGAGGTTaGAGTGAGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: MTSRFTHVAAHIRMSFLFLGGGG*SEPRWC
Trigger: GCACCATCTCGGCTCACTGCAACCTCCGCCTCCCAG...AAAAAGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CCA 90 bp GCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGCACTGCAAGAATTCCTaGAACAGTGAGTGGGACACC +
Preference number: 4 (lower is better)
Translates to: ACCCEYLYTARIPGTVSGHCKNS*NSEWDT
Trigger: GGTGTCCCACTCACTGTTCCAGGAATTCTTGCAGTG...CCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTGAAGCAAGGTTGTACTaGGGTCAGATGGATGTGAGT +
Preference number: 4 (lower is better)
Translates to: RQANLYQRGSHHFQWEAREARLY*GQMDVS
Trigger: ACTCACATCCATCTGACCCCAGTACAACCTTGCTTC...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGAGGCACTGCCCAGGGTaGAGCTTGGTGCATACAGCA +
Preference number: 4 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMRHCPG*SLVHTA
Trigger: TGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GGAAGAGATGGCTCCTGCGGATCTATCCCTCCACTTCCTTGCATTTCTCTACATTTGCAAAGCCAGGCGTaGACGCGATGCTTTCATATA +
Preference number: 4 (lower is better)
Translates to: GRDGSCGSIPPLPCISLHLQSQA*TRCFHI
Trigger: TATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAA...ATGTAGAGAAATGCAAGGAAGTGGAGGGATAGATCCGCAGGAGCCATCTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CAAACAAGAGAAACGCTGTCAGAGTCAGGCAGTAGGCAGCACCCCCTAAACTGCATAAACAAAGCTCCTTaGCAACACTGGACTTGTGTG +
Preference number: 4 (lower is better)
Translates to: QTRETLSESGSRQHPLNCINKAP*QHWTCV
Trigger: CACACAAGTCCAGTGTTGCCAAGGAGCTTTGTTTAT...GCAGTTTAGGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 72 bp GTTCCAAGCACCCAAGTGCTTGCTTTGGCCCTTCCATaGACTTACCATGCCACCTTGGCAAACTCCTTAATT +
Preference number: 4 (lower is better)
Translates to: VPSTQVLALALP*TYHATLANSLI
Trigger: AATTAAGGAGTTTGCCAAGGTGGCATGGTAAGTCAATGGAAGGGCCAAAGCAAGCACTTGGGTGCTTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 72 bp CGGACTCCAGGGCAATGTCTGACAGATACAACCAAGTaGGGGATGAATCGAAGAAGAGTTCTTGCATTTGCC +
Preference number: 4 (lower is better)
Translates to: RTPGQCLTDTTK*GMNRRRVLAFA
Trigger: GGCAAATGCAAGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCTGGAGTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 72 bp GCACAGTTTCTAGCACGCTGGAGACACTGGACAGTATaGCGATGGAGGACTAAAGGTAGCTTTCCTTCACAT +
Preference number: 4 (lower is better)
Translates to: AQFLARWRHWTV*RWRTKGSFPSH
Trigger: ATGTGAAGGAAAGCTACCTTTAGTCCTCCATCGCAATACTGTCCAGTGTCTCCAGCGTGCTAGAAACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CATAATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTAGTCCAGGAATTGTTTaGTGGAGAGCGGCGACGGCG +
Preference number: 4 (lower is better)
Translates to: HNDFKIHPCCSTYQNVLPSPGIV*WRAATA
Trigger: CGCCGTCGCCGCTCTCCATCAAACAATTCCTGGACT...AGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCATTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCAGTCCAGGAATTGTTTaGTGGAGAGCGGCGACGGCG +
Preference number: 4 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCSPGIV*WRAATA
Trigger: CGCCGTCGCCGCTCTCCATCAAACAATTCCTGGACT...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp GCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACCCTGCTTGCTGTTGTaGATACCTCTACACTGCAAG +
Preference number: 4 (lower is better)
Translates to: AKSLLAVVNTSTLQEFLEPCLLL*IPLHCK
Trigger: CTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGG...TTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp CAAACAAGAGAAACGCTGTCAGAGTCAGGCAGTAGGCAGCACCCCCTAAACTGCGAAGAAGATCTAACATaGAAGTCACCACATCTCACA +
Preference number: 4 (lower is better)
Translates to: QTRETLSESGSRQHPLNCEEDLT*KSPHLT
Trigger: TGTGAGATGTGGTGACTTTCATGTTAGATCTTCTTC...GCAGTTTAGGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp GCTCATGGCATTGTAAGGATCAAATGGCATGCTGTATGCAAAAGGTCTTTGGAACCTATGGGCTTCCTATaGCCCACCTCTCACCAGTCT +
Preference number: 4 (lower is better)
Translates to: AHGIVRIKWHAVCKRSLEPMGFL*PTSHQS
Trigger: AGACTGGTGAGAGGTGGGTCATAGGAAGCCCATAGG...TTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CAAACAAGAGAAACGCTGTCAGAGTCAGGCAGTAGGCAGCACCCCCTAAACTGCTATATGGGGGAAATCTaGCCATTTGCTTATAGGCAA +
Preference number: 4 (lower is better)
Translates to: QTRETLSESGSRQHPLNCYMGEI*PFAYRQ
Trigger: TTGCCTATAAGCAAATGGTCAGATTTCCCCCATATA...GCAGTTTAGGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp GAAGCAGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTGGGTTCCCAAGACTCTACTaGTCATTTGTTAACTTGGCA +
Preference number: 4 (lower is better)
Translates to: EAGPEERNQLWSRSHKCGFPRLY*SFVNLA
Trigger: TGCCAAGTTAACAAATGATCAGTAGAGTCTTGGGAA...CCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTCCTGTTTTCCAGGACTaGCTCAAGCACAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFPVFQD*LKHNSS
Trigger: ACTGGAGTTGTGCTTGAGTCAGTCCTGGAAAACAGG...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACTGCTTGGGCACCGGCTaGTTCAGCAGCCACCGGAAC +
Preference number: 4 (lower is better)
Translates to: VNITSFLFPYPKSSANSHCLGTG*FSSHRN
Trigger: GTTCCGGTGGCTGCTGAAGCAGCCGGTGCCCAAGCA...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR GCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCGCATGCGGAAAGAGATaGGGTTGGTATAAAACCGAT +
Preference number: 4 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIACGKR*GWYKTD
Trigger: ATCGGTTTTATACCAACCGCATCTCTTTCCGCATGC...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR GCA 90 bp AGGGCAATGTCTGACAGATACAACCAAGTTGGGGATGAATCGAAGAAGAGTTCTTGTAAGGAGGCTCTGTaGTCTTCGGTGACAGGCATC +
Preference number: 4 (lower is better)
Translates to: RAMSDRYNQVGDESKKSSCKEAL*SSVTGI
Trigger: GATGCCTGTCACCGAAGAGCACAGAGCCTCCTTACA...AGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTTGCAATCAAGCCACATaGAGCTGGTCAAAGCACACC +
Preference number: 4 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFCNQAT*SWSKHT
Trigger: GGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR GCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTACAGACACCACAGATTaGTCTGCAACTTCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFTDTTD*SATSGE
Trigger: TTCCCCGGAAGTTGCAGAGCAATCTGTGGTGTCTGT...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp ATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTTTTTAGCGCTCGATCTGCTTaGGCACCGGCTGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: MTSRFTHVAAHIRMSFLFSARSA*APAASA
Trigger: TGCTGAAGCAGCCGGTGCCCAAGCAGATCGAGCGCT...AAAAAGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGCATCGGCTTCAGGCGTaGTCTTGTAATGGCGCCATG +
Preference number: 4 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMHRLQA*SCNGAM
Trigger: CATGGCGCCATTACAAGACCACGCCTGAAGCCGATG...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCGCTATGATAACAAGATaGAGAGTACGAGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIAMITR*RVRGHK
Trigger: CTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGC...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp GCTCATGGCATTGTAAGGATCAAATGGCATGCTGTATGCAAAAGGTCTTTGGAACGGTCCTCAGACCTATaGGCTTCCTATGACCCACCT +
Preference number: 4 (lower is better)
Translates to: AHGIVRIKWHAVCKRSLERSSDL*ASYDPP
Trigger: AGGTGGGTCATAGGAAGCCCATAGGTCTGAGGACCG...TTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTTATGGGAGGCTGAGGTaGGTAGGTCACTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCYGRLR*VGHLRS
Trigger: TGACCTCAAGTGACCTACCCACCTCAGCCTCCCATA...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTCTATCACCCAGATCATaGGGAATTCATGTCCCTATC +
Preference number: 4 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSLSPRS*GIHVPI
Trigger: GATAGGGACATGAATTCCCCATGATCTGGGTGATAG...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GAAGCAGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTGGGCTTGACTTTGCTAACTaGAGGGCAAATATTACTCAG +
Preference number: 4 (lower is better)
Translates to: EAGPEERNQLWSRSHKCGLDFAN*RANITQ
Trigger: CTGAGTAATATTTGCCCTCCAGTTAGCAAAGTCAAG...CCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATAGATGCACAATTCATTaGTCAAAATCACATATCAGC +
Preference number: 4 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHRCTIH*SKSHIS
Trigger: GCTGATATGTGATTTTGACCAATGAATTGTGCATCT...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CTGATACCAACCTGTGGACTTGAGAGGGAGGCCTTCCCAGATTATCCTTTCCTCGCCAGAATGCCAAAGTaGTATGTTCCGTTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LIPTCGLEREAFPDYPFLARMPK*YVPFFL
Trigger: TAAGAAGAACGGAACATACCACTTTGGCATTCTGGC...GAGGAAAGGATAATCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATGACCCATTTCTCCATGGAATGTaGAGTGACAAATTATCTCAA +
Preference number: 4 (lower is better)
Translates to: PIPKTLTRSSDLWASYDPFLHGM*SDKLSQ
Trigger: TTGAGATAATTTGTCACTCCACATTCCATGGAGAAA...TGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATTATTGTTCTGATTATTaGGGTACAGAATTGTCCATG +
Preference number: 4 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHYCSDY*GTELSM
Trigger: CATGGACAATTCTGTACCCCAATAATCAGAACAATA...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACTGGCGCTTTGGCATTaGATTCTTCAACTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AKSLLAVVNTSTLQEFLELALWH*ILQLPA
Trigger: AGCTGGAAGTTGAAGAATTCAATGCCAAAGCGCCAG...TTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp CTGATACCAACCTGTGGACTTGAGAGGGAGGCCTTCCCAGATTATCCTTTCCTCACAGTGTATCACACTTaGAAGCATAAAGGAGTATCG +
Preference number: 4 (lower is better)
Translates to: LIPTCGLEREAFPDYPFLTVYHT*KHKGVS
Trigger: CGATACTCCTTTATGCTTTCAAGTGTGATACACTGT...GAGGAAAGGATAATCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTAAAGAAACCCTCTCCTaGACGGAATTAACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RQANLYQRGSHHFQWEARKETLS*TELTCS
Trigger: AGAGCAAGTTAATTCCGTTCAGGAGAGGGTTTCTTT...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGCTCTACCCCCAGGGATaGCCAGACAGACAACATGTT +
Preference number: 4 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMLYPQG*PDRQHV
Trigger: AACATGTTGTCTGTCTGGTCATCCCTGGGGGTAGAG...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCCGCTGGTTACAAGGCTaGGAAGATTCTGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCRWLQG*EDSAWS
Trigger: GGACCAGGCAGAATCTTCTCAGCCTTGTAACCAGCG...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTGAGCTGTATATAGGATaGTGGTTTCAATCCGGATTC +
Preference number: 4 (lower is better)
Translates to: RQANLYQRGSHHFQWEARELYIG*WFQSGF
Trigger: GAATCCGGATTGAAACCAGCATCCTATATACAGCTC...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGCACCCCCTAAACTGCTaGCTCCTCTCTCCTACAGTG +
Preference number: 4 (lower is better)
Translates to: LRGCELRAADGVYINHKQHPLNC*LLSPTV
Trigger: CACTGTAGGAGAGAGGAGGCAGCAGTTTAGGGGGTG...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAACAGCACCCCCTAAACTaGTGCCTCCTCTCTCCTACA +
Preference number: 4 (lower is better)
Translates to: PSISRSFSSFHLKLCTHEQHPLN*CLLSPT
Trigger: TGTAGGAGAGAGGAGGCAGCAGTTTAGGGGGTGCTG...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR GCA 90 bp AGGGCAATGTCTGACAGATACAACCAAGTTGGGGATGAATCGAAGAAGAGTTCTTCCAGCAGCCACAACTaGTGGGCAGTTAATGAGAAG +
Preference number: 4 (lower is better)
Translates to: RAMSDRYNQVGDESKKSSSSSHN*WAVNEK
Trigger: CTTCTCATTAACTGCCCAGCAGTTGTGGCTGCTGGA...AGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCTCGAAGAAGAGTTCTTaGATTTGCCAGGCATTTCTC +
Preference number: 4 (lower is better)
Translates to: CNQATCSWSKHTSSQGEISKKSS*ICQAFL
Trigger: GAGAAATGCCTGGCAAATGCAAGAACTCTTCTTCGA...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACAACATTAACTCAGTGTaGTTTGGTGGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHNINSV*FGGGLQ
Trigger: CTGGAGCCCACCACCAAAGCACACTGAGTTAATGTT...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACACACTGCAAGAATTCCTaGAACAGTGAGTGGGACACC +
Preference number: 4 (lower is better)
Translates to: QIPACCCEYLYTARIPGTHCKNS*NSEWDT
Trigger: GGTGTCCCACTCACTGTTCCAGGAATTCTTGCAGTG...TGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTCCGATCTCACAAATGTaGGCTACATGGAATCCAGGA +
Preference number: 4 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFPISQM*ATWNPG
Trigger: TCCTGGATTCCATGTAGCCCACATTTGTGAGATCGG...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTATCTCCCTTTCTGGCTaGATTTTTCTCCATAGCACT +
Preference number: 4 (lower is better)
Translates to: RQANLYQRGSHHFQWEARISLSG*IFLHST
Trigger: AGTGCTATGGAGAAAAATCCAGCCAGAAAGGGAGAT...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp ATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTATGTGTTTAGGATaGACAGGATTAGTGTCACCC +
Preference number: 4 (lower is better)
Translates to: MAGQIPACCCEYLYTARIPMCLG*TGLVSP
Trigger: GGGTGACACTAATCCTGTTCATCCTAAACACATAGG...AATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp ATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTGAGCCTTCAAATAAATaGCAGCATCAGTACCCACTC +
Preference number: 4 (lower is better)
Translates to: MAGQIPACCCEYLYTARIEPSNK*QHQYPL
Trigger: GAGTGGGTACTGATGCTGTCATTTATTTGAAGGCTC...AATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTTTTTGCTTTGTATTTTaGAGCATCCCTGGGTTCACT +
Preference number: 4 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSFCFVF*SIPGFT
Trigger: AGTGAACCCAGGGATGCTTCAAAATACAAAGCAAAA...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp TGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGACAGAATTCCTGGAACAGTaGGTGGGACACCTTTATTCA +
Preference number: 4 (lower is better)
Translates to: CCCEYLYTARIPGTVSGTEFLEQ*VGHLYS
Trigger: TGAATAAAGGTGTCCCACTCACTGTTCCAGGAATTC...TGTCCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCGAAGAAGATCTAACATaGAAGTCACCACATCTCACA +
Preference number: 4 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIEEDLT*KSPHLT
Trigger: TGTGAGATGTGGTGACTTTCATGTTAGATCTTCTTC...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAACTTGTGAGGATGTGGTaGTCGATGGGCCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PSISRSFSSFHLKLCTHELVRMW*SMGLPQ
Trigger: TTGAGGAAGGCCCATCGATCACCACATCCTCACAAG...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCATGTTCCTGCTAGGATaGCGACTAGTGGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCMFLLG*RLVGMG
Trigger: CCCCATTCCCACTAGTCGTCATCCTAGCAGGAACAT...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCAAGCATCTGGACTGCTaGAAAGATGGCAGAATAAAT +
Preference number: 4 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIKHLDC*KDGRIN
Trigger: ATTTATTCTGCCATCTTTTCAGCAGTCCAGATGCTT...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACTGCAGGGTTGTTCTGTaGAAATCTCAGAGAAGCATG +
Preference number: 4 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHCRVVL*KSQRSM
Trigger: CATGCTTCTCTGAGATTTTCACAGAACAACCCTGCA...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GGAAGAGATGGCTCCTGCGGATCTATCCCTCCACTTCCTTGCATTTCTCTACATTACTCAGTACATACGTaGTTGTTGATACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GRDGSCGSIPPLPCISLHYSVHT*LLILVL
Trigger: CAGCACAAGTATCAACAATCACGTATGTACTGAGTA...ATGTAGAGAAATGCAAGGAAGTGGAGGGATAGATCCGCAGGAGCCATCTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CTGATACCAACCTGTGGACTTGAGAGGGAGGCCTTCCCAGATTATCCTTTCCTCGTCAAATCCCTAAAGTaGCAGACTTTAGCTGTAAAT +
Preference number: 4 (lower is better)
Translates to: LIPTCGLEREAFPDYPFLVKSLK*QTLAVN
Trigger: ATTTACAGCTAAAGTCTGTCACTTTAGGGATTTGAC...GAGGAAAGGATAATCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CAGAAAAACGAGGACAGGCGGTTGAGATCTCAGATGAACCATGTGTGTTCATCCCTTGTAATGGCGCCATaGGGACTTATTAAAAACTGG +
Preference number: 4 (lower is better)
Translates to: QKNEDRRLRSQMNHVCSSLVMAP*GLIKNW
Trigger: CCAGTTTTTAATAAGTCCGCATGGCGCCATTACAAG...GGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp ATAAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGTTCACTGCTGGGATTaGTCCAATCATCGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: IKLMAGQIPACCCEYLYTVHCWD*SNHRLQ
Trigger: CTGAAGCCGATGATTGGAGCAATCCCAGCAGTGAAC...AGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR GCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACGGAAGAGATGGCTCCTaGGGATCTATCCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: HRKQTLQIQINRREGEKNGRDGS*GSIPPL
Trigger: AAGTGGAGGGATAGATCCGCAGGAGCCATCTCTTCC...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp AGGGCAATGTCTGACAGATACAACCAAGTTGGGGATGAATCGAAGAAGAGTTCTGCATGTTTATATAAGTaGTCCTGCCCTCTGACCCAC +
Preference number: 4 (lower is better)
Translates to: RAMSDRYNQVGDESKKSSACLYK*SCPLTH
Trigger: GTGGGTCAGAGGGCAGGAGCACTTATATAAACATGC...AGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACGACACTGGACAGTATTaGGATGGAGGACTAAAGGTA +
Preference number: 4 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHDTGQY*DGGLKV
Trigger: TACCTTTAGTCCTCCATCGCAATACTGTCCAGTGTC...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp TGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGACATTCAACTTCCAGCTCTaGAGCTACCAGGTAATACTG +
Preference number: 4 (lower is better)
Translates to: CCCEYLYTARIPGTVSGTFNFQL*SYQVIL
Trigger: CAGTATTACCTGGTAGCTCCAGAGCTGGAAGTTGAA...TGTCCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp ACTTATTGCAAAGCCAGGCGTGGACGCGATGCTTTCATATACATTCTCTCTCCTTTCAACTTCCAGCTCTaGAGCTACCAGGTAATACTG +
Preference number: 4 (lower is better)
Translates to: TYCKARRGRDAFIYILSPFNFQL*SYQVIL
Trigger: CAGTATTACCTGGTAGCTCCAGAGCTGGAAGTTGAA...AGGAGAGAGAATGTATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAATAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp ATAAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTCAAGCCACATGCAGCTaGTCAAAGCACACCTCATCT +
Preference number: 4 (lower is better)
Translates to: IKLMAGQIPACCCEYLYTQATCS*SKHTSS
Trigger: AGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTG...AGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACACGGTCCTCAGACCTATaGGCTTCCTATGACCCACCT +
Preference number: 4 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTRSSDL*ASYDPP
Trigger: AGGTGGGTCATAGGAAGCCCATAGGTCTGAGGACCG...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp ATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAAGGAGGCTCTGTGCTCTATAAAGGAGTATCGTTaGAAATTGAGGCCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: ITRWRVRGHKSCKEALCSIKEYR*KLRPRK
Trigger: CTTCCTAGGCCTCAATTTCCAACGATACTCCTTTAT...AGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp ATAAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGGATGTGGTGATCGATaGGCCTTCCTCAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: IKLMAGQIPACCCEYLYTGCGDR*AFLKQE
Trigger: CTCTTGTTTGAGGAAGGCCCATCGATCACCACATCC...AGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTATAATCCAAGAACTTTaGGAGGCTGAGACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFIIQEL*EAETGG
Trigger: TCCACCAGTCTCAGCCTCCCAAAGTTCTTGGATTAT...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GCTCATGGCATTGTAAGGATCAAATGGCATGCTGTATGCAAAAGGTCTTTGGAACAAATGTGGGCTACATaGAATCCAGGAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AHGIVRIKWHAVCKRSLEQMWAT*NPGGQK
Trigger: CTTCTGCCCTCCTGGATTCCATGTAGCCCACATTTG...TTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGTTGGCAAAACAGGACTaGCAACAGTCGGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMLAKQD*QQSGEA
Trigger: AGCTTCTCCCGACTGTTGCCAGTCCTGTTTTGCCAA...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAGCCCAGGGTGGAGCTTaGTGCATACAGCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIAQGGA*CIQQGC
Trigger: ACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGC...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTGACAATGAACTGAAATaGGCTCCCATCTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCDNELK*APICSV
Trigger: GACAGAGCAGATGGGAGCCCATTTCAGTTCATTGTC...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CAAACAAGAGAAACGCTGTCAGAGTCAGGCAGTAGGCAGCACCCCCTAAACTGCGGTACTTCACATAAGTaGAATCATAGTATTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QTRETLSESGSRQHPLNCGTSHK*NHSICP
Trigger: AGGACAAATACTATGATTCCACTTATGTGAAGTACC...GCAGTTTAGGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR CAA 72 bp CCCTGGCAACCTCCCTTCCACTTTGTGTCTCTGCATTaGACTACTCTAGGTACTTCACATAAGTGGAATCAT +
Preference number: 4 (lower is better)
Translates to: PWQPPFHFVSLH*TTLGTSHKWNH
Trigger: ATGATTCCACTTATGTGAAGTACCTAGAGTAGTCAAATGCAGAGACACAAAGTGGAAGGGAGGTTGCCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
3UTR CAA 72 bp ATGTACAGTTCAGTGGCATTGAGTACATTCACGCTGTaGTGCAAGCATCACCACCATCCATCTCCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: MYSSVALSTFTL*CKHHHHPSPEV
Trigger: AACTTCTGGAGATGGATGGTGGTGATGCTTGCACAACAGCGTGAATGTACTCAATGCCACTGAACTGTACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp GCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGAACTCAAATAGCATATaGAACAGATGTGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: ACCCEYLYTARIPGTVSGNSNSI*NRCEGT
Trigger: TGTGCCCTCACATCTGTTTCATATGCTATTTGAGTT...CCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp CAGAAAAACGAGGACAGGCGGTTGAGATCTCAGATGAACCATGTGTGTTCATCCATGAATGAAGAAAGATaGGATGAGTGCCATCTAAGG +
Preference number: 4 (lower is better)
Translates to: QKNEDRRLRSQMNHVCSSMNEER*DECHLR
Trigger: CCTTAGATGGCACTCATCTCATCTTTCTTCATTCAT...GGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACAGTCTATTTAAAGGGTaGCAAATTGGCCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHSLFKG*QIGPTS
Trigger: AGAGGTAGGGCCAATTTGTCACCCTTTAAATAGACT...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGCCGGGGAACATTATCTaGGTCACATGCTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LRGCELRAADGVYINHKQPGNII*VTCFSG
Trigger: ACCAGAGAAGCATGTGACTCAGATAATGTTCCCCGG...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACTTGTAATGGCGCCATaGGGACTTATTAAAAACTGG +
Preference number: 4 (lower is better)
Translates to: AKSLLAVVNTSTLQEFLELVMAP*GLIKNW
Trigger: CCAGTTTTTAATAAGTCCGCATGGCGCCATTACAAG...TTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR GCA 90 bp ATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTTTTTTGTAAGGAGGCTCTGTaGTCTTCGGTGACAGGCATC +
Preference number: 4 (lower is better)
Translates to: MTSRFTHVAAHIRMSFLFCKEAL*SSVTGI
Trigger: GATGCCTGTCACCGAAGAGCACAGAGCCTCCTTACA...AAAAAGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR GCA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCACTGAAGACATCAGATaGTATGATAACAAGATGGAG +
Preference number: 4 (lower is better)
Translates to: CNQATCSWSKHTSSQGEITEDIR*YDNKME
Trigger: CTCCATCTTGTTATCATAGCATCTGATGTCTTCAGT...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR GCA 90 bp TGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGACAGAGCTGTATATAGGATaGTGGTTTCAATCCGGATTC +
Preference number: 4 (lower is better)
Translates to: CCCEYLYTARIPGTVSGTELYIG*WFQSGF
Trigger: GAATCCGGATTGAAACCAGCATCCTATATACAGCTC...TGTCCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR GCA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAATGCAATCAAGCCACATaGAGCTGGTCAAAGCACACC +
Preference number: 4 (lower is better)
Translates to: PSISRSFSSFHLKLCTHECNQAT*SWSKHT
Trigger: GGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR GCA 90 bp AGGGCAATGTCTGACAGATACAACCAAGTTGGGGATGAATCGAAGAAGAGTTCTTCCATTGACTTACCATaGCACCTTGGCAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: RAMSDRYNQVGDESKKSSSIDLP*HLGKLL
Trigger: AAGGAGTTTGCCAAGGTGGCATGGTAAGTCAATGGA...AGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAGCAGGGATTTCTGTCTaGTTTGACCCCTGCCATGTG +
Preference number: 4 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTAGISV*FDPCHV
Trigger: CACATGGCAGGGGTCAAAGCAGACAGAAATCCCTGC...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAAGGAAAGAGATGCGGTTaGTATAAAACCGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: AKSLLAVVNTSTLQEFLEGKRCG*YKTDPE
Trigger: TTCTGGATCGGTTTTATACCAACCGCATCTCTTTCC...TTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTGGAAAGAGATGCGGTTaGTATAAAACCGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFGKRCG*YKTDPE
Trigger: TTCTGGATCGGTTTTATACCAACCGCATCTCTTTCC...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp CATAATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTACGATCTGCTGTATCTaGAATGGGAAAGGCGCACAG +
Preference number: 4 (lower is better)
Translates to: HNDFKIHPCCSTYQNVLPTICCI*NGKGAQ
Trigger: CTGTGCGCCTTTCCCATTCCAGATACAGCAGATCGT...AGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATATTGCTGCCGGATGTCTaGTGGGATGTGCTGACCACT +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLILLPDV*WDVLTT
Trigger: AGTGGTCAGCACATCCCACCAGACATCCGGCAGCAA...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 72 bp CTTGCTTTGGCCCTTCCATTGACTTACCATGCCACCTaGGCAAACTCCTTAATTGCTTTGGGATTCATACAA +
Preference number: 4 (lower is better)
Translates to: LALALPLTYHAT*ANSLIALGFIQ
Trigger: TTGTATGAATCCCAAAGCAATTAAGGAGTTTGCCAAGGTGGCATGGTAAGTCAATGGAAGGGCCAAAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CATAATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTCTGGCGCTTTGGCATTaGATTCTTCAACTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HNDFKIHPCCSTYQNVLPLALWH*ILQLPA
Trigger: AGCTGGAAGTTGAAGAATTCAATGCCAAAGCGCCAG...AGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp ATAAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTCATATGAAACAGATGTaGGGGCACATAAACCACCTG +
Preference number: 4 (lower is better)
Translates to: IKLMAGQIPACCCEYLYTHMKQM*GHINHL
Trigger: CAGGTGGTTTATGTGCCCTCACATCTGTTTCATATG...AGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp TGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGACAAACTCAAATAGCATATaGAACAGATGTGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: CCCEYLYTARIPGTVSGTNSNSI*NRCEGT
Trigger: TGTGCCCTCACATCTGTTTCATATGCTATTTGAGTT...TGTCCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp GCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGAACCTACAACGTTTATaGGGACAAACTGCAAACTTA +
Preference number: 4 (lower is better)
Translates to: ACCCEYLYTARIPGTVSGNLQRL*GQTANL
Trigger: TAAGTTTGCAGTTTGTCCTCATAAACGTTGTAGGTT...CCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACCTCTGTGCTCTTCGGTaGCAGGCATCAATCACACCA +
Preference number: 4 (lower is better)
Translates to: VNITSFLFPYPKSSANSHLCALR*QASITP
Trigger: TGGTGTGATTGATGCCTGTCACCGAAGAGCACAGAG...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp ATAAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTCACCACATCTCACAATaGGAATCCGATCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: IKLMAGQIPACCCEYLYTHHISQ*ESDQME
Trigger: TTCCATCTGATCGGATTCTCATTGTGAGATGTGGTG...AGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTTATGGAAAATTACCATaGAGAGAAGCACATCCTGTG +
Preference number: 4 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFYGKLP*REAHPV
Trigger: CACAGGATGTGCTTCTCTTCATGGTAATTTTCCATA...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp GCTCATGGCATTGTAAGGATCAAATGGCATGCTGTATGCAAAAGGTCTTTGGAAGAACACAGATGTTCCTaGAACTCTTCTTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: AHGIVRIKWHAVCKRSLEEHRCS*NSSCSC
Trigger: GCAACTGCAAGAAGAGTTTCAGGAACATCTGTGTTC...TTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGCAACCAAGTTGGGGATaGATCGAAGAAGAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMQPSWG*IEEEFL
Trigger: CAAGAACTCTTCTTCGATTCATCCCCAACTTGGTTG...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp ATAAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCATGCGGAAAGAGATaGGGTTGGTATAAAACCGAT +
Preference number: 4 (lower is better)
Translates to: IKLMAGQIPACCCEYLYTACGKR*GWYKTD
Trigger: ATCGGTTTTATACCAACCGCATCTCTTTCCGCATGC...AGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR GCA 90 bp ATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTTTTTCATCCCTGGGTTCACTaGTGGGATTGCTCCAATCAT +
Preference number: 4 (lower is better)
Translates to: MTSRFTHVAAHIRMSFLFHPWVH*WDCSNH
Trigger: ATGATTGGAGCAATCCCAGCAGTGAACCCAGGGATG...AAAAAGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR GCA 90 bp GGAACAGTGAGTGGGACACCTTTATTCAGACAAATCAGATACTTTGTAATGGAACATCCCTGGGTTCACTaGTGGGATTGCTCCAATCAT +
Preference number: 4 (lower is better)
Translates to: GTVSGTPLFRQIRYFVMEHPWVH*WDCSNH
Trigger: ATGATTGGAGCAATCCCAGCAGTGAACCCAGGGATG...TTCCATTACAAAGTATCTGATTTGTCTGAATAAAGGTGTCCCACTCACTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR GCA 90 bp CAGAAAAACGAGGACAGGCGGTTGAGATCTCAGATGAACCATGTGTGTTCATCCACTGAAGACATCAGATaGTATGATAACAAGATGGAG +
Preference number: 4 (lower is better)
Translates to: QKNEDRRLRSQMNHVCSSTEDIR*YDNKME
Trigger: CTCCATCTTGTTATCATAGCATCTGATGTCTTCAGT...GGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAAAGCTGGGCACACTCTaGGCGTGCATGTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIKLGTL*ACMFPE
Trigger: TTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCTT...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp ACACTTTTCTCCATGGAATGTGGAGTGACAAATTATCTCAAACCAAAGTCATCCAAATGGGCTCCCATCTaGTCTGTCTACCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLFSMECGVTNYLKPKSSKWAPI*SVYLKP
Trigger: TGGCTTCAGGTAGACAGAGCAGATGGGAGCCCATTT...GGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCCATGGAGAAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAAGTACCCATGAAACAATaGCTCCCCATTCCATCTTCG +
Preference number: 4 (lower is better)
Translates to: PSISRSFSSFHLKLCTHEVPMKQ*LPIPSS
Trigger: CGAAGATGGAATGGGGAGGCATTGTTTCATGGGTAC...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CCA 90 bp GGAACAGTGAGTGGGACACCTTTATTCAGACAAATCAGATACTTTGTAATGGAACCGCCACGTTACAGGTaGGATCGATACTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: GTVSGTPLFRQIRYFVMEPPRYR*DRYFLC
Trigger: ACATAGGAAGTATCGATCCCACCTGTAACGTGGCGG...TTCCATTACAAAGTATCTGATTTGTCTGAATAAAGGTGTCCCACTCACTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp ATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTTTTTCCGCCACGTTACAGGTaGGATCGATACTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: MTSRFTHVAAHIRMSFLFPPRYR*DRYFLC
Trigger: ACATAGGAAGTATCGATCCCACCTGTAACGTGGCGG...AAAAAGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp ATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTATACAGACGGGAAATTaGCAAACCATAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: MAGQIPACCCEYLYTARIIQTGN*QTITKS
Trigger: GGATTTGGTTATGGTTTGCCAATTTCCCGTCTGTAT...AATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp GCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAAATAAAGGAGTATCGTTaGAAATTGAGGCCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: AKSLLAVVNTSTLQEFLEIKEYR*KLRPRK
Trigger: CTTCCTAGGCCTCAATTTCCAACGATACTCCTTTAT...TTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CCA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTCTTAAGGGGAAAGGATaGAGAGAACTGAAGTCAATT +
Preference number: 4 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFLKGKG*RELKSI
Trigger: AATTGACTTCAGTTCTCTCCATCCTTTCCCCTTAAG...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp ACTTATTGCAAAGCCAGGCGTGGACGCGATGCTTTCATATACATTCTCTCTCCTTTCCAGAGATCTCCATaGGATTCTTATCAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: TYCKARRGRDAFIYILSPFQRSP*DSYQRL
Trigger: TAGCCTTTGATAAGAATCCCATGGAGATCTCTGGAA...AGGAGAGAGAATGTATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAATAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 72 bp AAAGACACATCCGGAAACTGCCATCATTATGGGGTTTaGTTACAAGGAAACAGCAGCCCACACTATTCAATG +
Preference number: 4 (lower is better)
Translates to: KDTSGNCHHYGV*LQGNSSPHYSM
Trigger: CATTGAATAGTGTGGGCTGCTGTTTCCTTGTAACAAAACCCCATAATGATGGCAGTTTCCGGATGTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 72 bp CCAGTGCTGTGTGCCAGAGTTAGACATTTCTTGACTTaGCTAACTGGAGGGCAAATATTACTCAGTACATAC +
Preference number: 4 (lower is better)
Translates to: PVLCARVRHFLT*LTGGQILLSTY
Trigger: GTATGTACTGAGTAATATTTGCCCTCCAGTTAGCAAAGTCAAGAAATGTCTAACTCTGGCACACAGCACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAACATATGAAACAGATGTaGGGGCACATAAACCACCTG +
Preference number: 4 (lower is better)
Translates to: PSISRSFSSFHLKLCTHEHMKQM*GHINHL
Trigger: CAGGTGGTTTATGTGCCCTCACATCTGTTTCATATG...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTATCGGTACTATCATATaGCTAAAGCAGGATGAATGG +
Preference number: 4 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCIGTII*LKQDEW
Trigger: CCATTCATCCTGCTTTAGTCATATGATAGTACCGAT...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp ACTTATTGCAAAGCCAGGCGTGGACGCGATGCTTTCATATACATTCTCTCTCCTGGTCTCCAAACCATGTaGATATGTATTCATGAGAAA +
Preference number: 4 (lower is better)
Translates to: TYCKARRGRDAFIYILSPGLQTM*ICIHEK
Trigger: TTTCTCATGAATACATATTCACATGGTTTGGAGACC...AGGAGAGAGAATGTATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACAATGGCGGACACCACTaGCTTCCAATCGGATTTCAC +
Preference number: 4 (lower is better)
Translates to: VNITSFLFPYPKSSANSHNGGHH*LPIGFH
Trigger: GTGAAATCCGATTGGAAGTCAGTGGTGTCCGCCATT...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAGGACTAGTTGGGCTATaGCAGACACCACAGATTGCT +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIGLVGL*QTPQIA
Trigger: AGCAATCTGTGGTGTCTGTCATAGCCCAACTAGTCC...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp ATAAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTCTTGTAATGGCGCCATaGGGACTTATTAAAAACTGG +
Preference number: 4 (lower is better)
Translates to: IKLMAGQIPACCCEYLYTLVMAP*GLIKNW
Trigger: CCAGTTTTTAATAAGTCCGCATGGCGCCATTACAAG...AGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR GCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAGTTCACTGCTGGGATTaGTCCAATCATCGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIVHCWD*SNHRLQ
Trigger: CTGAAGCCGATGATTGGAGCAATCCCAGCAGTGAAC...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR GCA 90 bp ACTTATTGCAAAGCCAGGCGTGGACGCGATGCTTTCATATACATTCTCTCTCCTATATCTAATGCTCACTaGATTCCAGAAAAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: TYCKARRGRDAFIYILSPISNAH*IPEKGN
Trigger: GTTGCCTTTTTCTGGAATGCAGTGAGCATTAGATAT...AGGAGAGAGAATGTATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAATAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCAAGAGTTCTTGCATTTaGCAGGCATTTCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCKSSCI*QAFLRV
Trigger: GACTCGGAGAAATGCCTGGCAAATGCAAGAACTCTT...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTTCTTGCTGGCAATATTaGTTCCTTCTGTTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCSCWQY*FLLFAQ
Trigger: TTGAGCAAACAGAAGGAAGCAATATTGCCAGCAAGA...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CATAATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTTTCAACTTCCAGCTCTaGAGCTACCAGGTAATACTG +
Preference number: 4 (lower is better)
Translates to: HNDFKIHPCCSTYQNVLPFNFQL*SYQVIL
Trigger: CAGTATTACCTGGTAGCTCCAGAGCTGGAAGTTGAA...AGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACTACCCACACTCTTCTTaGACAGGTAAAACTGGTACC +
Preference number: 4 (lower is better)
Translates to: HRKQTLQIQINRREGEKNYPHSS*TGKTGT
Trigger: GGTACCAGTTTTACCTGTCCAAGAAGAGTGTGGGTA...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGATTCAACAGTGTCTATaGAAGGCACTCACAGACAAC +
Preference number: 4 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMIQQCL*KALTDN
Trigger: GTTGTCTGTGAGTGCCTTCCATAGACACTGTTGAAT...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp AGGGCAATGTCTGACAGATACAACCAAGTTGGGGATGAATCGAAGAAGAGTTCTCAATGTTTAAGCATCTaGACTGCTGAAAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: RAMSDRYNQVGDESKKSSQCLSI*TAEKMA
Trigger: TGCCATCTTTTCAGCAGTCCAGATGCTTAAACATTG...AGAACTCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGTCAGACATTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp ATAAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTTTTTGCTTTGTATTTTaGAGCATCCCTGGGTTCACT +
Preference number: 4 (lower is better)
Translates to: IKLMAGQIPACCCEYLYTFCFVF*SIPGFT
Trigger: AGTGAACCCAGGGATGCTTCAAAATACAAAGCAAAA...AGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACTGGTCAGCAAGACAATaGACTGAAATGGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VNITSFLFPYPKSSANSHWSARQ*TEMGSH
Trigger: ATGGGAGCCCATTTCAGTTCATTGTCTTGCTGACCA...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGTTCCTAAGTAAACTTTaGCTTGACTGTCCACTCAAG +
Preference number: 4 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMFLSKL*LDCPLK
Trigger: CTTGAGTGGACAGTCAAGGCAAAGTTTACTTAGGAA...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp ATAAAATTGATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTATACAGACGGGAAATTaGCAAACCATAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: IKLMAGQIPACCCEYLYTIQTGN*QTITKS
Trigger: GGATTTGGTTATGGTTTGCCAATTTCCCGTCTGTAT...AGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCATCAATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACGGTTTGGGACAAATATaGTATTTGGTCACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: HRKQTLQIQINRREGEKNGLGQI*YLVTRS
Trigger: GCTCCTTGTGACCAAATACCATATTTGTCCCAAACC...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp ATGGCAGGCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTGAACTTCTACATCAGTaGACTCAACACTTACAAATT +
Preference number: 4 (lower is better)
Translates to: MAGQIPACCCEYLYTARIELLHQ*TQHLQI
Trigger: AATTTGTAAGTGTTGAGTCCACTGATGTAGAAGTTC...AATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGCCTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CCA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCGCTCCTTGGCAACACTaGACTTGTGTGTACATTTAT +
Preference number: 4 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCAPWQH*TCVYIY
Trigger: ATAAATGTACACACAAGTCCAGTGTTGCCAAGGAGC...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACGAGCCTTCAAATAAATaGCAGCATCAGTACCCACTC +
Preference number: 4 (lower is better)
Translates to: VNITSFLFPYPKSSANSHEPSNK*QHQYPL
Trigger: GAGTGGGTACTGATGCTGTCATTTATTTGAAGGCTC...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAGAGCCTTCAAATAAATaGCAGCATCAGTACCCACTC +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIEPSNK*QHQYPL
Trigger: GAGTGGGTACTGATGCTGTCATTTATTTGAAGGCTC...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACTTTTGCTTTGTATTTTaGAGCATCCCTGGGTTCACT +
Preference number: 4 (lower is better)
Translates to: HRKQTLQIQINRREGEKNFCFVF*SIPGFT
Trigger: AGTGAACCCAGGGATGCTTCAAAATACAAAGCAAAA...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAAAGATGGATGGAAGTTTaGCAGAAGCATAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: PSISRSFSSFHLKLCTHERWMEV*QKHKNS
Trigger: GGAGTTTTTATGCTTCTGTCAAACTTCCATCCATCT...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCATCGGTACTATCATATaGCTAAAGCAGGATGAATGG +
Preference number: 4 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCIGTII*LKQDEW
Trigger: CCATTCATCCTGCTTTAGTCATATGATAGTACCGAT...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAAACAGTGTATCACACTTaGAAGCATAAAGGAGTATCG +
Preference number: 4 (lower is better)
Translates to: PSISRSFSSFHLKLCTHETVYHT*KHKGVS
Trigger: CGATACTCCTTTATGCTTTCAAGTGTGATACACTGT...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAGAACACAGATGTTCCTaGAACTCTTCTTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIEHRCS*NSSCSC
Trigger: GCAACTGCAAGAAGAGTTTCAGGAACATCTGTGTTC...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAATATATGGGGGAAATCTaGCCATTTGCTTATAGGCAA +
Preference number: 4 (lower is better)
Translates to: PSISRSFSSFHLKLCTHEYMGEI*PFAYRQ
Trigger: TTGCCTATAAGCAAATGGTCAGATTTCCCCCATATA...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACGGGAAAGAATTTAGCTaGAAAAGGGTCCATGTCTAT +
Preference number: 4 (lower is better)
Translates to: HRKQTLQIQINRREGEKNGKEFS*KRVHVY
Trigger: ATAGACATGGACCCTTTTTCAGCTAAATTCTTTCCC...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACCCATGGAATGTGGAGTaGCAAATTATCTCAAACCAA +
Preference number: 4 (lower is better)
Translates to: HRKQTLQIQINRREGEKNPWNVE*QIISNQ
Trigger: TTGGTTTGAGATAATTTGTCACTCCACATTCCATGG...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAGAAACTTTGTACCCATaGAACAATGCCTCCCCATTC +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIETLYP*NNASPF
Trigger: GAATGGGGAGGCATTGTTTCATGGGTACAAAGTTTC...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR GCA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACGCATGCGGAAAGAGATaGGGTTGGTATAAAACCGAT +
Preference number: 4 (lower is better)
Translates to: VNITSFLFPYPKSSANSHACGKR*GWYKTD
Trigger: ATCGGTTTTATACCAACCGCATCTCTTTCCGCATGC...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR GCA 90 bp ATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTTTTTAGCAACAGTACGATCTaGTGTATCTGGAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: MTSRFTHVAAHIRMSFLFSNSTI*CIWNGK
Trigger: TTTCCCATTCCAGATACAGCAGATCGTACTGTTGCT...AAAAAGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR GCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAGACACATCCGGAAACTaGCATCATTATGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIDTSGN*HHYGVL
Trigger: CAAAACCCCATAATGATGGCAGTTTCCGGATGTGTC...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp ACACTTTTCTCCATGGAATGTGGAGTGACAAATTATCTCAAACCAAAGTCATCCGGAAAGAGATGCGGTTaGTATAAAACCGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: TLFSMECGVTNYLKPKSSGKRCG*YKTDPE
Trigger: TTCTGGATCGGTTTTATACCAACCGCATCTCTTTCC...GGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCCATGGAGAAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp ATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTTTTTGGTTTGGGACAAATATaGTATTTGGTCACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: MTSRFTHVAAHIRMSFLFGLGQI*YLVTRS
Trigger: GCTCCTTGTGACCAAATACCATATTTGTCCCAAACC...AAAAAGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CCA 90 bp ACTCTAGGTACTTCACATAAGTGGAATCATAGTATTTGTCCTTTTATGTCTGGTGAAGCAAGGTTGTACTaGGGTCAGATGGATGTGAGT +
Preference number: 4 (lower is better)
Translates to: TLGTSHKWNHSICPFMSGEARLY*GQMDVS
Trigger: ACTCACATCCATCTGACCCCAGTACAACCTTGCTTC...ACCAGACATAAAAGGACAAATACTATGATTCCACTTATGTGAAGTACCTAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CCA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGGTGTTACAACCTATATaGGGGAAATCTGACCATTTG +
Preference number: 4 (lower is better)
Translates to: LRGCELRAADGVYINHKQVLQPI*GKSDHL
Trigger: CAAATGGTCAGATTTCCCCCATATAGGTTGTAACAC...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCAACATTGAGAAGATCTaGTGCTATCTTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCNIEKI*CYLLHL
Trigger: GAGATGCAGAAGATAGCACCAGATCTTCTCAATGTT...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 72 bp TTTGTGTTACAACCTATATGGGGGAAATCTGACCATTaGCTTATAGGCAAACCCAGTAAACAGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: FVLQPIWGKSDH*LIGKPSKQPDS
Trigger: AGAATCTGGCTGTTTACTGGGTTTGCCTATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
3UTR CAA 72 bp TTAAAACCAGTGCTGTGTGCCAGAGTTAGACATTTCTaGACTTTGCTAACTGGAGGGCAAATATTACTCAGT +
Preference number: 4 (lower is better)
Translates to: LKPVLCARVRHF*TLLTGGQILLS
Trigger: ACTGAGTAATATTTGCCCTCCAGTTAGCAAAGTCAAGAAATGTCTAACTCTGGCACACAGCACTGGTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp ACTCTAGGTACTTCACATAAGTGGAATCATAGTATTTGTCCTTTTATGTCTGGTGAATTCCTGGAACAGTaGGTGGGACACCTTTATTCA +
Preference number: 4 (lower is better)
Translates to: TLGTSHKWNHSICPFMSGEFLEQ*VGHLYS
Trigger: TGAATAAAGGTGTCCCACTCACTGTTCCAGGAATTC...ACCAGACATAAAAGGACAAATACTATGATTCCACTTATGTGAAGTACCTAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp CATAATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTAACCTACAACGTTTATaGGGACAAACTGCAAACTTA +
Preference number: 4 (lower is better)
Translates to: HNDFKIHPCCSTYQNVLPNLQRL*GQTANL
Trigger: TAAGTTTGCAGTTTGTCCTCATAAACGTTGTAGGTT...AGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCATTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR TCA 90 bp ACTCTAGGTACTTCACATAAGTGGAATCATAGTATTTGTCCTTTTATGTCTGGTGCAGTTCTCTCTGTTTaGCTTGCAGAAGGCAATCTT +
Preference number: 4 (lower is better)
Translates to: TLGTSHKWNHSICPFMSGAVLSV*LAEGNL
Trigger: AAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGC...ACCAGACATAAAAGGACAAATACTATGATTCCACTTATGTGAAGTACCTAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR TCA 90 bp ACACTTTTCTCCATGGAATGTGGAGTGACAAATTATCTCAAACCAAAGTCATCCAGATGGATGGAAGTTTaGCAGAAGCATAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: TLFSMECGVTNYLKPKSSRWMEV*QKHKNS
Trigger: GGAGTTTTTATGCTTCTGTCAAACTTCCATCCATCT...GGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCCATGGAGAAAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCAGTATCGTTGGAAATTaGGGCCTAGGAAGATATTAT +
Preference number: 4 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCSIVGN*GLGRYY
Trigger: ATAATATCTTCCTAGGCCTCAATTTCCAACGATACT...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAGGGAAAGAATTTAGCTaGAAAAGGGTCCATGTCTAT +
Preference number: 4 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTGKEFS*KRVHVY
Trigger: ATAGACATGGACCCTTTTTCAGCTAAATTCTTTCCC...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR TCA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACCCTTTCCTCCACCTCTaGAACAAGTTTAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: VNITSFLFPYPKSSANSHPFLHL*NKFRSV
Trigger: AACACTTCTAAACTTGTTTCAGAGGTGGAGGAAAGG...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAGGATGTCATTTATCATaGAAAGAGCAAGGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIGCHLS*KEQGSG
Trigger: GCCTGAACCTTGCTCTTTTCATGATAAATGACATCC...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAAGCAACAGTACGATCTaGTGTATCTGGAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLISNSTI*CIWNGK
Trigger: TTTCCCATTCCAGATACAGCAGATCGTACTGTTGCT...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAGTGTTACAACCTATATaGGGGAAATCTGACCATTTG +
Preference number: 4 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTVLQPI*GKSDHL
Trigger: CAAATGGTCAGATTTCCCCCATATAGGTTGTAACAC...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAATCAGCTCTCAAATGTaGAGTCTTTGTATGAAAGGG +
Preference number: 4 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTISSQM*SLCMKG
Trigger: CCCTTTCATACAAAGACTCCACATTTGAGAGCTGAT...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAAGTCACATGCTTCTCTaGTCATGTTTTTCCAACATC +
Preference number: 4 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTSHMLL*SCFSNI
Trigger: GATGTTGGAAAAACATGACCAGAGAAGCATGTGACT...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR TCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACATACATACGTGATTGTTaGTACTTGTGCTGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTYIRDC*YLCCFD
Trigger: GTCAAAACAGCACAAGTATCAACAATCACGTATGTA...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAAAGGATCAAATGGCATaGTGTATGCAAAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTKDQMA*CMQKVF
Trigger: AAAGACCTTTTGCATACAGCATGCCATTTGATCCTT...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR GCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAGATAAAAGGGATCTATaGTTATCTCCTAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTDKRDL*LSPRQR
Trigger: CCTTTGTCTAGGAGATAAGCATAGATCCCTTTTATC...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACATACAGACGGGAAATTaGCAAACCATAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: VNITSFLFPYPKSSANSHIQTGN*QTITKS
Trigger: GGATTTGGTTATGGTTTGCCAATTTCCCGTCTGTAT...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp CCATCCATCTCCAGAAGTTTTTCATCTTTCCACCTGAAACTTTGTACCCATGAAACTGAAACATTTATATaGACATTAAAACGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PSISRSFSSFHLKLCTHETETFI*TLKRGR
Trigger: TCTGCCCCGTTTTAATGTCCATATAAATGTTTCAGT...TTCATGGGTACAAAGTTTCAGGTGGAAAGATGAAAAACTTCTGGAGATGGATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CCA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCGAACTTCTACATCAGTaGACTCAACACTTACAAATT +
Preference number: 4 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCELLHQ*TQHLQI
Trigger: AATTTGTAAGTGTTGAGTCCACTGATGTAGAAGTTC...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CCA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAGATCATTTGTTAACTTaGCAAAACAGGACTGGCAAC +
Preference number: 4 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIDHLLT*QNRTGN
Trigger: GTTGCCAGTCCTGTTTTGCCAAGTTAACAAATGATC...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAGGACTGCTGAAAAGATaGCAGAATAAATGCATGTTT +
Preference number: 4 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTGLLKR*QNKCMF
Trigger: AAACATGCATTTATTCTGCCATCTTTTCAGCAGTCC...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACAAACTGCCATCATTATaGGGTTTTGTTACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: HRKQTLQIQINRREGEKNKLPSL*GFVTRK
Trigger: TTTCCTTGTAACAAAACCCCATAATGATGGCAGTTT...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CCA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACGTGCTGTTTCTTATTTaGTTCAAGCATTTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: HRKQTLQIQINRREGEKNVLFLI*FKHFLG
Trigger: ACCTAAGAAATGCTTGAACCAAATAAGAAACAGCAC...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
3UTR CAA 72 bp AATCATGTACAGTTGACAAACAGGATAAATGAATACTaGGGTAAAGAGGCTAGTAAGCCAGAAGAACACAGA +
Preference number: 4 (lower is better)
Translates to: NHVQLTNRINEY*GKEASKPEEHR
Trigger: TCTGTGTTCTTCTGGCTTACTAGCCTCTTTACCCAAGTATTCATTTATCCTGTTTGTCAACTGTACATGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR GCA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACTTTATAAGAAAGCGGTaGCACGATAGAAACAACAGT +
Preference number: 4 (lower is better)
Translates to: VNITSFLFPYPKSSANSHFIRKR*HDRNNS
Trigger: ACTGTTGTTTCTATCGTGGCACCGCTTTCTTATAAA...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS GCA 90 bp GGCCGCAAGGGCTGGCGCAGCCAAGCCGCACGGATAGGGCACGTTTaGGAAGCGCGCACCCCGGCCTCGATCTCGGCCTCGGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: GRKGWRSQAARIGHV*EARTPASISASAPP
Trigger: CGGCGGCGCCGAGGCCGAGATCGAGGCCGGGGTGCGCGCTTCGCAAACGTGCCCTATCCGTGCGGCTTGGCTGCGCCAGCCCTTGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379162.9
ENST00000568479.2
ENST00000648777.1
CDS CCA 90 bp TGGAGAGCGGCGACGGCGAAAAGCGCGAGTAGCGCTCGATCTGCTTaGGCACCGGCTGCTTCAGCAGCCACCGGAACAGCCGCATCCTCG +
Preference number: 5 (lower is better)
Translates to: WRAATAKSASSARSA*APAASAATGTAASS
Trigger: CGAGGATGCGGCTGTTCCGGTGGCTGCTGAAGCAGCCGGTGCCCAAGCAGATCGAGCGCTACTCGCGCTTTTCGCCGTCGCCGCTCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379162.9
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CAA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCACGGATAGGGCACGTTaGCGAAGCGCGCACCCCGGC +
Preference number: 5 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLTDRAR*RSAHPG
Trigger: GCCGGGGTGCGCGCTTCGCAAACGTGCCCTATCCGT...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GATCTGTCTCCCAATGGGACCCGGCCACCCCCAGGGCAGAGGATTCAACAGTGTAACGAGGACAGGCGGTaGAGATCTCAGATGAACCAT +
Preference number: 5 (lower is better)
Translates to: DLSPNGTRPPPGQRIQQCNEDRR*RSQMNH
Trigger: ATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTT...ACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATGAGCTTAGGCGTCTCTaGGTAACTCTGGTGATGTGC +
Preference number: 5 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHELRRL*VTLVMC
Trigger: GCACATCACCAGAGTTACCAAGAGACGCCTAAGCTC...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAACGGATAGGGCACGTTaGCGAAGCGCGCACCCCGGC +
Preference number: 5 (lower is better)
Translates to: QIPACCCEYLYTARIPGTTDRAR*RSAHPG
Trigger: GCCGGGGTGCGCGCTTCGCAAACGTGCCCTATCCGT...TGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CAA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATGACCACAGTTCCCCATaGGTCAGCAAGACAATGAAC +
Preference number: 5 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHDHSSP*VSKTMN
Trigger: GTTCATTGTCTTGCTGACCAATGGGGAACTGTGGTC...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCAGCAGTTCTCTCTGTTaGACTTGCAGAAGGCAATCT +
Preference number: 5 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLSSSLC*TCRRQS
Trigger: AGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCT...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATGACCCAGGTTTGTCTGGCGCTTaGGCATTGAATTCTTCAACT +
Preference number: 5 (lower is better)
Translates to: PIPKTLTRSSDLWASYDPGLSGA*ALNSST
Trigger: AGTTGAAGAATTCAATGCCAAAGCGCCAGACAAACC...TGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CAA 90 bp ACTTATTGCAAAGCCAGGCGTGGACGCGATGCTTTCATATACATTCTCTCTCCTTGCCCAGGGTGGAGCTaGGTGCATACAGCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: TYCKARRGRDAFIYILSPCPGWS*VHTARL
Trigger: CAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCA...AGGAGAGAGAATGTATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAATAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CAGAAAAACGAGGACAGGCGGTTGAGATCTCAGATGAACCATGTGTGTTCATCCTACCAACCTGTGGACTaGAGAGGGAGGCCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: QKNEDRRLRSQMNHVCSSYQPVD*RGRPSQ
Trigger: CTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTA...GGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GCTCATGGCATTGTAAGGATCAAATGGCATGCTGTATGCAAAAGGTCTTTGGAACCAATGGGAGGCACGTaGCCCCTGCAGCGCCACCAA +
Preference number: 5 (lower is better)
Translates to: AHGIVRIKWHAVCKRSLEPMGGT*PLQRHQ
Trigger: TTGGTGGCGCTGCAGGGGCAACGTGCCTCCCATTGG...TTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GGAACAGTGAGTGGGACACCTTTATTCAGACAAATCAGATACTTTGTAATGGAAACGGATAGGGCACGTTaGCGAAGCGCGCACCCCGGC +
Preference number: 5 (lower is better)
Translates to: GTVSGTPLFRQIRYFVMETDRAR*RSAHPG
Trigger: GCCGGGGTGCGCGCTTCGCAAACGTGCCCTATCCGT...TTCCATTACAAAGTATCTGATTTGTCTGAATAAAGGTGTCCCACTCACTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CAA 90 bp CCCATCCCCAAGACACTGACTCGGTCCTCAGACCTATGGGCTTCCTATGACCCAGTTTTGCTTTGTATTTaGAAGCATCCCTGGGTTCAC +
Preference number: 5 (lower is better)
Translates to: PIPKTLTRSSDLWASYDPVLLCI*KHPWVH
Trigger: GTGAACCCAGGGATGCTTCAAAATACAAAGCAAAAC...TGGGTCATAGGAAGCCCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CAA 90 bp CAAACAAGAGAAACGCTGTCAGAGTCAGGCAGTAGGCAGCACCCCCTAAACTGCGCCCTAGGTGGAGGTTaGGGACAAATATGGTATTTG +
Preference number: 5 (lower is better)
Translates to: QTRETLSESGSRQHPLNCALGGG*GQIWYL
Trigger: CAAATACCATATTTGTCCCAAACCTCCACCTAGGGC...GCAGTTTAGGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CAA 90 bp CACACCAGGACAGACATTAGGGAAAGGCACTGCCCAGGGTGGAGCTTGGTGCATGTTAATCGTCCTTTCTaGCTGGCAATATTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: HTRTDIRERHCPGWSLVHVNRPF*LAILLP
Trigger: AGGAAGCAATATTGCCAGCAAGAAAGGACGATTAAC...ATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp AGGCACTGCCCAGGGTGGAGCTTGGTGCATACAGCAAGGCTGTCACTAGTGCTCAGGATAAATGAATACTaGGGTAAAGAGGCTAGTAAG +
Preference number: 5 (lower is better)
Translates to: RHCPGWSLVHTARLSLVLRINEY*GKEASK
Trigger: CTTACTAGCCTCTTTACCCAAGTATTCATTTATCCT...GAGCACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CTGATACCAACCTGTGGACTTGAGAGGGAGGCCTTCCCAGATTATCCTTTCCTCGAAGAGTTCTTGCATTaGCCAGGCATTTCTCCGAGT +
Preference number: 5 (lower is better)
Translates to: LIPTCGLEREAFPDYPFLEEFLH*PGISPS
Trigger: ACTCGGAGAAATGCCTGGCAAATGCAAGAACTCTTC...GAGGAAAGGATAATCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CGGCATGTACCAACCAGGCCACACAACAGCATAGAACTGAGGGGACCAAGCTTCAGAGTTAGACATTTCTaGACTTTGCTAACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: RHVPTRPHNSIELRGPSFRVRHF*TLLTGG
Trigger: CCCTCCAGTTAGCAAAGTCAAGAAATGTCTAACTCT...GAAGCTTGGTCCCCTCAGTTCTATGCTGTTGTGTGGCCTGGTTGGTACATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCTCTGGCGCTTTGGCATaGAATTCTTCAACTTCCAGC +
Preference number: 5 (lower is better)
Translates to: CNQATCSWSKHTSSQGEISGALA*NSSTSS
Trigger: GCTGGAAGTTGAAGAATTCAATGCCAAAGCGCCAGA...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CAA 90 bp TGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGACAGGTTCACTGCTGGGATaGCTCCAATCATCGGCTTCA +
Preference number: 5 (lower is better)
Translates to: CCCEYLYTARIPGTVSGTGSLLG*LQSSAS
Trigger: TGAAGCCGATGATTGGAGCAATCCCAGCAGTGAACC...TGTCCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CAA 90 bp GCCAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAAGGTTCACTGCTGGGATaGCTCCAATCATCGGCTTCA +
Preference number: 5 (lower is better)
Translates to: AKSLLAVVNTSTLQEFLEGSLLG*LQSSAS
Trigger: TGAAGCCGATGATTGGAGCAATCCCAGCAGTGAACC...TTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CAA 90 bp GCTCATGGCATTGTAAGGATCAAATGGCATGCTGTATGCAAAAGGTCTTTGGAAGAAGGTGACGAAAGCTaGCTGCCGGATGTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AHGIVRIKWHAVCKRSLEEGDES*LPDVWW
Trigger: CCACCAGACATCCGGCAGCAAGCTTTCGTCACCTTC...TTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GAAGCAGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTGGGAGCACTTGCATGCTTTaGAGAGGATGTGAACTTAGA +
Preference number: 5 (lower is better)
Translates to: EAGPEERNQLWSRSHKCGSTCML*RGCELR
Trigger: TCTAAGTTCACATCCTCTCAAAAGCATGCAAGTGCT...CCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCGAACTTAGAAAGATGTaGCCCTACCACCCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIELRKM*PYHPRK
Trigger: TTTCCTTGGGTGGTAGGGCAACATCTTTCTAAGTTC...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GCTCATGGCATTGTAAGGATCAAATGGCATGCTGTATGCAAAAGGTCTTTGGAAGGATTTCTGTCTGCTTaGACCCCTGCCATGTGCCCA +
Preference number: 5 (lower is better)
Translates to: AHGIVRIKWHAVCKRSLEGFLSA*TPAMCP
Trigger: TGGGCACATGGCAGGGGTCAAAGCAGACAGAAATCC...TTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGGGTTCACTGCTGGGATaGCTCCAATCATCGGCTTCA +
Preference number: 5 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMGSLLG*LQSSAS
Trigger: TGAAGCCGATGATTGGAGCAATCCCAGCAGTGAACC...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTAGGAAGCTAGGGTCTTaGCATGTAAAGGACCATTTT +
Preference number: 5 (lower is better)
Translates to: RQANLYQRGSHHFQWEARRKLGS*HVKDHF
Trigger: AAAATGGTCCTTTACATGCAAAGACCCTAGCTTCCT...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GAAGCAGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTGGGACTATGTCACACTGTTaGGATGGAAAGAATTCTGTA +
Preference number: 5 (lower is better)
Translates to: EAGPEERNQLWSRSHKCGTMSHC*DGKNSV
Trigger: TACAGAATTCTTTCCATCCAAACAGTGTGACATAGT...CCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CAAACAAGAGAAACGCTGTCAGAGTCAGGCAGTAGGCAGCACCCCCTAAACTGCGCTATCCACTTTAAGTaGCCTGTCATTTTTGGTAAA +
Preference number: 5 (lower is better)
Translates to: QTRETLSESGSRQHPLNCAIHFK*PVIFGK
Trigger: TTTACCAAAAATGACAGGCAACTTAAAGTGGATAGC...GCAGTTTAGGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GGAAGAGATGGCTCCTGCGGATCTATCCCTCCACTTCCTTGCATTTCTCTACATATCGAAGAAGAGTTCTaGCATTTGCCAGGCATTTCT +
Preference number: 5 (lower is better)
Translates to: GRDGSCGSIPPLPCISLHIEEEF*HLPGIS
Trigger: AGAAATGCCTGGCAAATGCAAGAACTCTTCTTCGAT...ATGTAGAGAAATGCAAGGAAGTGGAGGGATAGATCCGCAGGAGCCATCTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp AGACAGGCAAACCTCTATCAAAGAGGAAGTCACCACTTCCAATGGGAGGCACGTACAGATACAACCAAGTaGGGGATGAATCGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: RQANLYQRGSHHFQWEARTDTTK*GMNRRR
Trigger: TCTTCTTCGATTCATCCCCAACTTGGTTGTATCTGT...ACGTGCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGGGGTCCCCTACAAAGTaGAGTGCAGAGCCAGACACA +
Preference number: 5 (lower is better)
Translates to: LRGCELRAADGVYINHKQGSPTK*SAEPDT
Trigger: TGTGTCTGGCTCTGCACTCAACTTTGTAGGGGACCC...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCCATCATTATGGGGTTTaGTTACAAGGAAACAGCAGC +
Preference number: 5 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIHHYGV*LQGNSS
Trigger: GCTGCTGTTTCCTTGTAACAAAACCCCATAATGATG...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CAGAAAAACGAGGACAGGCGGTTGAGATCTCAGATGAACCATGTGTGTTCATCCTTAAATGAACACTTATaGCAAAGCCAGGCGTGGACG +
Preference number: 5 (lower is better)
Translates to: QKNEDRRLRSQMNHVCSSLNEHL*QSQAWT
Trigger: CGTCCACGCCTGGCTTTGCAATAAGTGTTCATTTAA...GGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GAAGCAGGACCAGAGGAGAGAAACCAACTCTGGAGCCGATCTCACAAATGTGGGCCATTTTCAACCAATTaGGAAGGCAAAGATGAACTA +
Preference number: 5 (lower is better)
Translates to: EAGPEERNQLWSRSHKCGPFSTN*EGKDEL
Trigger: TAGTTCATCTTTGCCTTCCAAATTGGTTGAAAATGG...CCCACATTTGTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GATGAGATTTTTCTACACCATATTATCCATATTCGGCCCCTTACATGGTACTGCGACAGACACCACAGATaGCTCTGCAACTTCCGGGGA +
Preference number: 5 (lower is better)
Translates to: DEIFLHHIIHIRPLTWYCDRHHR*LCNFRG
Trigger: TCCCCGGAAGTTGCAGAGCAATCTGTGGTGTCTGTC...GCAGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTTATTGGGGTACAGAATaGTCCATGTGCTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFYWGTE*SMCSRT
Trigger: AGTCCTGGAGCACATGGACAATTCTGTACCCCAATA...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGGTTTTGCTTTGTATTTaGAAGCATCCCTGGGTTCAC +
Preference number: 5 (lower is better)
Translates to: ACCCEYLYTARIPGTVSGVLLCI*KHPWVH
Trigger: GTGAACCCAGGGATGCTTCAAAATACAAAGCAAAAC...CCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CAA 90 bp TTTTCACAAACTCCTTTTGTGACACGACATTTAGCACGGCTCAATGGCGGACACGGGAAATCTGACCATTaGCTTATAGGCAAACCCAGT +
Preference number: 5 (lower is better)
Translates to: FSQTPFVTRHLARLNGGHGKSDH*LIGKPS
Trigger: ACTGGGTTTGCCTATAAGCAAATGGTCAGATTTCCC...GTGTCCGCCATTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CAGAAAAACGAGGACAGGCGGTTGAGATCTCAGATGAACCATGTGTGTTCATCCTGCTCTACAGATAATTaGGGGTTTAGAGCTTACCCT +
Preference number: 5 (lower is better)
Translates to: QKNEDRRLRSQMNHVCSSCSTDN*GFRAYP
Trigger: AGGGTAAGCTCTAAACCCCAAATTATCTGTAGAGCA...GGATGAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGTTAACTCAGTGTGCTTaGGTGGTGGGCTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LRGCELRAADGVYINHKQLTQCA*VVGSRS
Trigger: AGACCTGGAGCCCACCACCAAAGCACACTGAGTTAA...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GGAAGAGATGGCTCCTGCGGATCTATCCCTCCACTTCCTTGCATTTCTCTACATAGACATTTCTTGACTTaGCTAACTGGAGGGCAAATA +
Preference number: 5 (lower is better)
Translates to: GRDGSCGSIPPLPCISLHRHFLT*LTGGQI
Trigger: TATTTGCCCTCCAGTTAGCAAAGTCAAGAAATGTCT...ATGTAGAGAAATGCAAGGAAGTGGAGGGATAGATCCGCAGGAGCCATCTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGGTTTGTCTGGCGCTTaGGCATTGAATTCTTCAACT +
Preference number: 5 (lower is better)
Translates to: QIPACCCEYLYTARIPGTGLSGA*ALNSST
Trigger: AGTTGAAGAATTCAATGCCAAAGCGCCAGACAAACC...TGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CAA 90 bp TGCAATCAAGCCACATGCAGCTGGTCAAAGCACACCTCATCTCAGGGAGAAATCGCTCTCATTGAGTTCTaGAACAACTCAAATAGCATA +
Preference number: 5 (lower is better)
Translates to: CNQATCSWSKHTSSQGEIALIEF*NNSNSI
Trigger: TATGCTATTTGAGTTGTTCAAGAACTCAATGAGAGC...GATTTCTCCCTGAGATGAGGTGTGCTTTGACCAGCTGCATGTGGCTTGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CAA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTGTTTTGCTTTGTATTTaGAAGCATCCCTGGGTTCAC +
Preference number: 5 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFVLLCI*KHPWVH
Trigger: GTGAACCCAGGGATGCTTCAAAATACAAAGCAAAAC...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CAA 90 bp CAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAAGCAGTTCTCTCTGTTaGACTTGCAGAAGGCAATCT +
Preference number: 5 (lower is better)
Translates to: QIPACCCEYLYTARIPGTSSSLC*TCRRQS
Trigger: AGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCT...TGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CAA 90 bp CAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAACACTCTGTACAAATTaGGTATTGACCAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: QIPACCCEYLYTARIPGTTLCTN*VLTRRQ
Trigger: CTGCCTCCTGGTCAATACCAAATTTGTACAGAGTGT...TGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CAA 90 bp TGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAGTGAGTGGGACAAGGAAGCTAGGGTCTTaGCATGTAAAGGACCATTTT +
Preference number: 5 (lower is better)
Translates to: CCCEYLYTARIPGTVSGTRKLGS*HVKDHF
Trigger: AAAATGGTCCTTTACATGCAAAGACCCTAGCTTCCT...TGTCCCACTCACTGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CAA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTACTTACCATGCCACCTaGGCAAACTCCTTAATTGCT +
Preference number: 5 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCTYHAT*ANSLIA
Trigger: AGCAATTAAGGAGTTTGCCAAGGTGGCATGGTAAGT...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp AGAGCAGGTGGGAGAAAGCAGTTCTCTCTGTTTGACTTGCAGAAGGCAATCTTTAGTTGCCTGTCATTTTaGGTAAAAGCTGCCAAATCC +
Preference number: 5 (lower is better)
Translates to: RAGGRKQFSLFDLQKAIFSCLSF*VKAAKS
Trigger: GGATTTGGCAGCTTTTACCAAAAATGACAGGCAACT...AAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACACAAGATTCACCCATGTaGCAGCACATATCAGAATGT +
Preference number: 5 (lower is better)
Translates to: QIPACCCEYLYTARIPGTQDSPM*QHISEC
Trigger: ACATTCTGATATGTGCTGCAACATGGGTGAATCTTG...TGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CAA 90 bp TTAGCAGCTGTTCCCAGTTTAGACACCGCTTTTATGAGTCAAGGAGTTATGATGACACTCTGTACAAATTaGGTATTGACCAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LAAVPSLDTAFMSQGVMMTLCTN*VLTRRQ
Trigger: CTGCCTCCTGGTCAATACCAAATTTGTACAGAGTGT...CATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAGGGTCCATGTCTATTaGTGTTACAACCTATATGGG +
Preference number: 5 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCRVHVY*CYNLYG
Trigger: CCCATATAGGTTGTAACACAAATAGACATGGACCCT...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CAA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACTTAAAGGGTGACAAATaGGCCCTACCTCTGGGGATA +
Preference number: 5 (lower is better)
Translates to: HRKQTLQIQINRREGEKNLKGDK*ALPLGI
Trigger: TATCCCCAGAGGTAGGGCCAATTTGTCACCCTTTAA...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTTTGGCAACACTGGACTaGTGTGTACATTTATCACTG +
Preference number: 5 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCLATLD*CVHLSL
Trigger: CAGTGATAAATGTACACACAAGTCCAGTGTTGCCAA...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp ATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTTTTTTCTGGCGCTTTGGCATaGAATTCTTCAACTTCCAGC +
Preference number: 5 (lower is better)
Translates to: MTSRFTHVAAHIRMSFLFSGALA*NSSTSS
Trigger: GCTGGAAGTTGAAGAATTCAATGCCAAAGCGCCAGA...AAAAAGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CAA 90 bp ACTTATTGCAAAGCCAGGCGTGGACGCGATGCTTTCATATACATTCTCTCTCCTGCTCTCATTGAGTTCTaGAACAACTCAAATAGCATA +
Preference number: 5 (lower is better)
Translates to: TYCKARRGRDAFIYILSPALIEF*NNSNSI
Trigger: TATGCTATTTGAGTTGTTCAAGAACTCAATGAGAGC...AGGAGAGAGAATGTATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTGTATGCAAAAGGTCTTaGGAATCTATACACAAGGCT +
Preference number: 5 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCVCKRS*ESIHKA
Trigger: AGCCTTGTGTATAGATTCCAAAGACCTTTTGCATAC...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GGCAAACCCAGTAAACAGCCAGATTCTCTGCCTAAATTAAAAGAATCATGTACAAGACACTGGACAGTATaGCGATGGAGGACTAAAGGT +
Preference number: 5 (lower is better)
Translates to: GKPSKQPDSLPKLKESCTRHWTV*RWRTKG
Trigger: ACCTTTAGTCCTCCATCGCAATACTGTCCAGTGTCT...TGTACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp CACAGAAAACAGACTCTCCAAATTCAGATCAATCGACGTGAAGGTGAGAAAAACCATCTTCTTCTCCAGTaGTTAAATCTCCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: HRKQTLQIQINRREGEKNHLLLQ*LNLPLL
Trigger: CAGCAGTGGGAGATTTAACAACTGGAGAAGAAGATG...GTTTTTCTCACCTTCACGTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GCTCATGGCATTGTAAGGATCAAATGGCATGCTGTATGCAAAAGGTCTTTGGAATATAAACAAAGCTCCTaGGCAACACTGGACTTGTGT +
Preference number: 5 (lower is better)
Translates to: AHGIVRIKWHAVCKRSLEYKQSS*ATLDLC
Trigger: ACACAAGTCCAGTGTTGCCAAGGAGCTTTGTTTATA...TTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTTTTGTGTCTCTGCATTaGACTACTCTAGGTACTTCA +
Preference number: 5 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCFVSLH*TTLGTS
Trigger: TGAAGTACCTAGAGTAGTCAAATGCAGAGACACAAA...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CAA 90 bp CAAATCCCTGCTTGCTGTTGTGAATACCTCTACACTGCAAGAATTCCTGGAACAAGGATAAATGAATACTaGGGTAAAGAGGCTAGTAAG +
Preference number: 5 (lower is better)
Translates to: QIPACCCEYLYTARIPGTRINEY*GKEASK
Trigger: CTTACTAGCCTCTTTACCCAAGTATTCATTTATCCT...TGTTCCAGGAATTCTTGCAGTGTAGAGGTATTCACAACAGCAAGCAGGGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CAA 90 bp ATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTTTTTGGGAAATCTGACCATTaGCTTATAGGCAAACCCAGT +
Preference number: 5 (lower is better)
Translates to: MTSRFTHVAAHIRMSFLFGKSDH*LIGKPS
Trigger: ACTGGGTTTGCCTATAAGCAAATGGTCAGATTTCCC...AAAAAGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CAA 90 bp AAGACATCAGATGCTATGATAACAAGATGGAGAGTACGAGGGCACAAGAGCTGTAATCAAATTGCAGGGTaGTTCTGTGAAAATCTCAGA +
Preference number: 5 (lower is better)
Translates to: KTSDAMITRWRVRGHKSCNQIAG*FCENLR
Trigger: TCTGAGATTTTCACAGAACAACCCTGCAATTTGATT...ACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GCTCATGGCATTGTAAGGATCAAATGGCATGCTGTATGCAAAAGGTCTTTGGAATTTAGAGCTTACCCTTaGAGGAATAGTATACTGAAG +
Preference number: 5 (lower is better)
Translates to: AHGIVRIKWHAVCKRSLEFRAYP*RNSILK
Trigger: CTTCAGTATACTATTCCTCAAAGGGTAAGCTCTAAA...TTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCCATGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGTTCCTGAGGTTGATTTaGTTCTCCTTAGTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: LRGCELRAADGVYINHKQFLRLI*FSLVFA
Trigger: AGCAAACACTAAGGAGAACAAAATCAACCTCAGGAA...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp TTGAGAGGATGTGAACTTAGAGCAGCAGATGGTGTGTATATAAACCATAAGCAGTTAACCTTCCTGAGGTaGATTTTGTTCTCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: LRGCELRAADGVYINHKQLTFLR*ILFSLV
Trigger: CACTAAGGAGAACAAAATCAACCTCAGGAAGGTTAA...CTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp GTAAATATAACATCATTCCTCTTTCCTTATCCCAAATCGTCTGCTAATTCCCACCAAGATTCACCCATGTaGCAGCACATATCAGAATGT +
Preference number: 5 (lower is better)
Translates to: VNITSFLFPYPKSSANSHQDSPM*QHISEC
Trigger: ACATTCTGATATGTGCTGCAACATGGGTGAATCTTG...GTGGGAATTAGCAGACGATTTGGGATAAGGAAAGAGGAATGATGTTATATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS-3UTR CAA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATAAGGGTCCATGTCTATTaGTGTTACAACCTATATGGG +
Preference number: 5 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIRVHVY*CYNLYG
Trigger: CCCATATAGGTTGTAACACAAATAGACATGGACCCT...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568479.2
ENST00000648777.1
CDS-3UTR CAA 90 bp GGAACAGTGAGTGGGACACCTTTATTCAGACAAATCAGATACTTTGTAATGGAAGCTCTCATTGAGTTCTaGAACAACTCAAATAGCATA +
Preference number: 5 (lower is better)
Translates to: GTVSGTPLFRQIRYFVMEALIEF*NNSNSI
Trigger: TATGCTATTTGAGTTGTTCAAGAACTCAATGAGAGC...TTCCATTACAAAGTATCTGATTTGTCTGAATAAAGGTGTCCCACTCACTGTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379162.9
ENST00000648777.1
CDS-3UTR CAA 90 bp CCATGTCTATTTGTGTTACAACCTATATGGGGGAAATCTGACCATTTGCTTATACCACACATCCAAAAGTaGAACAACAAGCTGTCTATA +
Preference number: 5 (lower is better)
Translates to: PCLFVLQPIWGKSDHLLIPHIQK*NNKLSI
Trigger: TATAGACAGCTTGTTGTTCAACTTTTGGATGTGTGG...TATAAGCAAATGGTCAGATTTCCCCCATATAGGTTGTAACACAAATAGACATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp ACACTTTTCTCCATGGAATGTGGAGTGACAAATTATCTCAAACCAAAGTCATCCTTAAATTTCAAGCACTaGCATGCTTTTGAGAGGATG +
Preference number: 5 (lower is better)
Translates to: TLFSMECGVTNYLKPKSSLNFKH*HAFERM
Trigger: CATCCTCTCAAAAGCATGCAAGTGCTTGAAATTTAA...GGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCCATGGAGAAAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568479.2
CDS-3UTR CAA 90 bp ATGACTTCAAGATTCACCCATGTTGCAGCACATATCAGAATGTCCTTCCTTTTTCTATTAGTCTTGATCTaGTCTCATCTTAACCATTGC +
Preference number: 5 (lower is better)
Translates to: MTSRFTHVAAHIRMSFLFLLVLI*SHLNHC
Trigger: GCAATGGTTAAGATGAGACAAGATCAAGACTAATAG...AAAAAGGAAGGACATTCTGATATGTGCTGCAACATGGGTGAATCTTGAAGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648777.1
CDS CAA 90 bp TGGCCGCAAGGGCTGGCGCAGCCAAGCCGCACGGATAGGGCACGTTaGCGAAGCGCGCACCCCGGCCTCGATCTCGGCCTCGGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: WPQGLAQPSRTDRAR*RSAHPGLDLGLGAA
Trigger: GGCGGCGCCGAGGCCGAGATCGAGGCCGGGGTGCGCGCTTCGCAAACGTGCCCTATCCGTGCGGCTTGGCTGCGCCAGCCCTTGCGGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379162.9
ENST00000568479.2
ENST00000648777.1
CDS GCA 72 bp GGCTGGCGCAGCCAAGCCGCACGGATAGGGCACGTTTaGGAAGCGCGCACCCCGGCCTCGATCTCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: GWRSQAARIGHV*EARTPASISAS
Trigger: CGAGGCCGAGATCGAGGCCGGGGTGCGCGCTTCGCAAACGTGCCCTATCCGTGCGGCTTGGCTGCGCCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379162.9
ENST00000568479.2
ENST00000648777.1
CDS CAA 72 bp GGGCTGGCGCAGCCAAGCCGCACGGATAGGGCACGTTaGCGAAGCGCGCACCCCGGCCTCGATCTCGGCCTC +
Preference number: 6 (lower is better)
Translates to: GLAQPSRTDRAR*RSAHPGLDLGL
Trigger: GAGGCCGAGATCGAGGCCGGGGTGCGCGCTTCGCAAACGTGCCCTATCCGTGCGGCTTGGCTGCGCCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379162.9
ENST00000568479.2
ENST00000648777.1
CDS CCA 72 bp ACAGACCCGCCTAGACGCCCGGGTGGCCGCAAGGGCTaGCGCAGCCAAGCCGCACGGATAGGGCACGTTTGC +
Preference number: 6 (lower is better)
Translates to: TDPPRRPGGRKG*RSQAARIGHVC
Trigger: GCAAACGTGCCCTATCCGTGCGGCTTGGCTGCGCCAGCCCTTGCGGCCACCCGGGCGTCTAGGCGGGTCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379162.9
ENST00000568479.2
ENST00000648777.1
CDS CCA 72 bp GCGACGGCGAAAAGCGCGAGTAGCGCTCGATCTGCTTaGGCACCGGCTGCTTCAGCAGCCACCGGAACAGCC +
Preference number: 6 (lower is better)
Translates to: ATAKSASSARSA*APAASAATGTA
Trigger: GGCTGTTCCGGTGGCTGCTGAAGCAGCCGGTGCCCAAGCAGATCGAGCGCTACTCGCGCTTTTCGCCGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379162.9
ENST00000568479.2
ENST00000648777.1