RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDIA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000155660

Ensembl transcript IDs: ENST00000286091.9, ENST00000413966.1, ENST00000466592.1, ENST00000652332.1

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTGGACGCCCCGACCATaGGCCACGCAGGGCGTCTGC +
Preference number: 2 (lower is better)
Translates to: QGGRLAMPSLKQHPWQGCWTPRP*ATQGVC
Trigger: GCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCA...GCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGTTGCCGGCCTCGGCGTaGACGCCCCGACCATGGGCC +
Preference number: 2 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLLPASA*TPRPWA
Trigger: GGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAA...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR GCA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCCACCCCTGGCAGGGCTaGTCAGTGGCAGCTCTCACT +
Preference number: 2 (lower is better)
Translates to: PLCPQPLVCREAAWRCPAHPWQG*SVAALT
Trigger: AGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGGGTG...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR GCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGATACTGTCGTTTGTTaGCGGCCTCGGCGTGGACGC +
Preference number: 2 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPDTVVC*RPRRGR
Trigger: GCGTCCACGCCGAGGCCGGCAACAAACGACAGTATC...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR GCA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGGGGGACCCTGGATCATaGCCCTTTGCCCCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRGDPGS*PFAPSP
Trigger: AGGGCTGGGGGCAAAGGGGCATGATCCAGGGTCCCC...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR GCA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGGATACTGTCGTTTGTTaGCGGCCTCGGCGTGGACGC +
Preference number: 2 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRDTVVC*RPRRGR
Trigger: GCGTCCACGCCGAGGCCGGCAACAAACGACAGTATC...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR TCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGTCAGTATTCAGAGCATaGAGTGAAACACCAAAGTAT +
Preference number: 2 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWSVFRA*SETPKY
Trigger: ATACTTTGGTGTTTCACTTCATGCTCTGAATACTGA...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR GCA 90 bp ACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAGCAAAGCCACGCAGGGCGTCTaGCTCCTCCCACCTTCCGCA +
Preference number: 2 (lower is better)
Translates to: TYQKPNLRQQFLRQRKSKATQGV*LLPPSA
Trigger: TGCGGAAGGTGGGAGGAGGCAGACGCCCTGCGTGGC...TTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR CCA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATCTATTCAGTCATTCATaGTTATTCAGTATTCAGAGC +
Preference number: 2 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNLFSHS*LFSIQS
Trigger: GCTCTGAATACTGAATAACCATGAATGACTGAATAG...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR CCA 90 bp ACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAGCAAACTATTCAGTCATTCATaGTTATTCAGTATTCAGAGC +
Preference number: 2 (lower is better)
Translates to: TYQKPNLRQQFLRQRKSKLFSHS*LFSIQS
Trigger: GCTCTGAATACTGAATAACCATGAATGACTGAATAG...TTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR GCA 72 bp CCTGGAGCTGAGCCCACCCTGGGGGACCCTGGATCATaGCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: PGAEPTLGDPGS*PFAPSPWFAGR
Trigger: CCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCAGGGTCCCCCAGGGTGGGCTCAGCTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR CCA 72 bp GTCCTTTCTGCTCCGGCACTGGGGGCTCTCAAGAGGTaGGGCTGCCACGTGGGTGGCCTCTCCCTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: VLSAPALGALKR*GCHVGGLSLEL
Trigger: CAGCTCCAGGGAGAGGCCACCCACGTGGCAGCCCCACCTCTTGAGAGCCCCCAGTGCCGGAGCAGAAAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR CAA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTAGATACTGTCGTTTGTaGCCGGCCTCGGCGTGGACG +
Preference number: 3 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPRYCRL*PASAWT
Trigger: CGTCCACGCCGAGGCCGGCAACAAACGACAGTATCT...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR CAA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTCCGAGATACTGTCGTTaGTTGCCGGCCTCGGCGTGG +
Preference number: 3 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSPRYCR*LPASAW
Trigger: CCACGCCGAGGCCGGCAACAAACGACAGTATCTCGG...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR CCA 72 bp AATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTaGACGCCCCGACCATGGGCCACGCAGGGCGTCTGC +
Preference number: 3 (lower is better)
Translates to: NPRYCRLLPASA*TPRPWATQGVC
Trigger: GCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
3UTR-3UTR CAA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATAGATACTGTCGTTTGTaGCCGGCCTCGGCGTGGACG +
Preference number: 3 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNRYCRL*PASAWT
Trigger: CGTCCACGCCGAGGCCGGCAACAAACGACAGTATCT...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCAAGCGTCGGCGGCCGCTaGGCGCACCGAGAACTCGGG +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPSVGGR*AHRELG
Trigger: CCCGAGTTCTCGGTGCGCTCAGCGGCCGCCGACGCT...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCGGCCAATCCCAGACTaGCGCCGGCACGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRRPIPD*RRHGPR
Trigger: GCGCGGTCCGTGCCGGCGTCAGTCTGGGATTGGCCG...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS-3UTR CCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACCGAGAACTCGGGGTCTaGCCGACAGCCCGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHRELGV*PTARRS
Trigger: GGAGCGACGGGCTGTCGGCCAGACCCCGAGTTCTCG...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCAGGGCTGCCACGTGGGTaGCCTCTCCCTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPGLPRG*PLPGAE
Trigger: CTCAGCTCCAGGGAGAGGCCACCCACGTGGCAGCCC...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCAGGGGACCCTGGATCATaGCCCTTTGCCCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPGDPGS*PFAPSP
Trigger: AGGGCTGGGGGCAAAGGGGCATGATCCAGGGTCCCC...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCGCCACGGCCAGCAGCTaGACCAGCCCCAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLCPQPLVCREAAWRCPAATASS*TSPKSS
Trigger: GCTGCTCTTGGGGCTGGTGCAGCTGCTGGCCGTGGC...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGCCACGCAGGGCGTCTaGCTCCTCCCACCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRATQGV*LLPPSA
Trigger: TGCGGAAGGTGGGAGGAGGCAGACGCCCTGCGTGGC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCCCCAGCCCTTGGTTTaGAGGGAGGCCGCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRPQPLV*REAAWR
Trigger: TCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGG...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGTCGTCCCCGGCGATTaGCAGGGGGCGGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRVVPGD*QGAEEV
Trigger: GACTTCCTCCGCCCCCTGCCAATCGCCGGGGACGAC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS-3UTR CCA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCCGAGAACTCGGGGTCTaGCCGACAGCCCGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PLCPQPLVCREAAWRCPARELGV*PTARRS
Trigger: GGAGCGACGGGCTGTCGGCCAGACCCCGAGTTCTCG...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACTTTGACACCTTGCGGTaGCCAACCAGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHFDTLR*PTRGRA
Trigger: CGCCCTGCCCCTGGTTGGCCACCGCAAGGTGTCAAA...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGGTGGGGCTGCCACGTaGGTGGCCTCTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPGGAAT*VASPWS
Trigger: GCTCCAGGGAGAGGCCACCCACGTGGCAGCCCCACC...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGGGGCTCTCAAGAGGTaGGGCTGCCACGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRGALKR*GCHVGG
Trigger: GCCACCCACGTGGCAGCCCCACCTCTTGAGAGCCCC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCAGGCCAGCACAGACGCTaGGGTTGCATCGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPGQHRR*GCIDLG
Trigger: GCCAAGATCGATGCAACCTCAGCGTCTGTGCTGGCC...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACGGCCAGCACAGACGCTaGGGTTGCATCGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHGQHRR*GCIDLG
Trigger: GCCAAGATCGATGCAACCTCAGCGTCTGTGCTGGCC...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCCCTCCCCACTCTCGCTaGGCCCCAGGTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: QGGRLAMPSLKQHPWQGCPPHSR*APGPSP
Trigger: AGGTGAAGGACCTGGGGCTCAGCGAGAGTGGGGAGG...GCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCAGGCCAGGTCTGTTTCTaGGGTGGCGTCGACCTTTGC +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPGQVCF*GGVDLC
Trigger: GCAAAGGTCGACGCCACCGCAGAAACAGACCTGGCC...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGCCACGCAGGGCGTCTaGCTCCTCCCACCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPATQGV*LLPPSA
Trigger: TGCGGAAGGTGGGAGGAGGCAGACGCCCTGCGTGGC...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCAGATACTGTCGTTTGTTaGCGGCCTCGGCGTGGACGC +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPDTVVC*RPRRGR
Trigger: GCGTCCACGCCGAGGCCGGCAACAAACGACAGTATC...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACGGGTCAGAATCTCCTTaGAGGGAGGCCCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHGSESP*REARTA
Trigger: AGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGACCC...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACTGGGTGGAGCCCTGCTaGACGTCCATCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHWVEPC*TSIMWL
Trigger: GAGCCACATGATGGACGTCCAGCAGGGCTCCACCCA...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS-3UTR CCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCACCCTGGGGGACCCTaGATCATGCCCCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRHPGGP*IMPLCP
Trigger: GGGGCAAAGGGGCATGATCCAGGGTCCCCCAGGGTG...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACTGGTCAACACAAGCGTaGCTTCTGGTGGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHWSTQA*LLVEAS
Trigger: GGACGCCTCCACCAGAAGTCACGCTTGTGTTGACCA...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCAGCGCTTAGCATCGTTTaGCACCTTGCGGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPALSIV*HLAVAN
Trigger: GTTGGCCACCGCAAGGTGTCAAACGATGCTAAGCGC...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTCCTCCCCACTCTCGCTaGGCCCCAGGTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPPPHSR*APGPSP
Trigger: AGGTGAAGGACCTGGGGCTCAGCGAGAGTGGGGAGG...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGGCCACGGCCAGCAGCTaGACCAGCCCCAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQATASS*TSPKSS
Trigger: GCTGCTCTTGGGGCTGGTGCAGCTGCTGGCCGTGGC...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCCACCCCTGGCAGGGCTaGTCAGTGGCAGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: QGGRLAMPSLKQHPWQGCHPWQG*SVAALT
Trigger: AGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGGGTG...GCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCCCACCCCGCAGTATCTaGCTCTGGGTCCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PLCPQPLVCREAAWRCPAPPRSI*LWVQGP
Trigger: AGGACCCTGGACCCAGAGGCAGATACTGCGGGGTGG...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCGCTGGGGACGTCGTTaGCAGTGGCGTCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRRWGRR*QWRPSW
Trigger: CCAAGATGGACGCCACTGCCAACGACGTCCCCAGCG...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCATGGACGCCCCGACCATaGGCCACGCAGGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAWTPRP*ATQGVC
Trigger: GCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCA...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGTGGACGCCCCGACCATaGGCCACGCAGGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLWTPRP*ATQGVC
Trigger: GCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCA...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGGTGGGGCTGCCACGTaGGTGGCCTCTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLGGAAT*VASPWS
Trigger: GCTCCAGGGAGAGGCCACCCACGTGGCAGCCCCACC...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACCGCAGTATCTGCCTCTaGGTCCAGGGTCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHRSICL*VQGPFC
Trigger: GCAGAAAGGACCCTGGACCCAGAGGCAGATACTGCG...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTCAGCACGAAGTCCTTaGTGGCCGAGTCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PLCPQPLVCREAAWRCPASARSP*WPSPGW
Trigger: CCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGA...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCCGTCCATCTTGGCGATaGCCAGGCCCTTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PLCPQPLVCREAAWRCPARPSWR*PGPFGP
Trigger: AGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACG...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTTGGCGATGCCCAGCCTaGAACAGCACCCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSWRCPA*NSTPGR
Trigger: CCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCA...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACACTCACATCAAACCTaGTGGCCAGCACAGACGCTG +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPHSHQT*WPAQTL
Trigger: CAGCGTCTGTGCTGGCCAGCAGGTTTGATGTGAGTG...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGATACTGTCGTTTGTTaGCGGCCTCGGCGTGGACGC +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRDTVVC*RPRRGR
Trigger: GCGTCCACGCCGAGGCCGGCAACAAACGACAGTATC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCCCCAGCCCTTGGTTTaGAGGGAGGCCGCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWPQPLV*REAAWR
Trigger: TCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGG...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCAAGCGTGACTTCTGGTaGAGGCGTCCAGTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLCPQPLVCREAAWRCPAKRDFW*RRPVGL
Trigger: CAGCCCGACTGGACGCCTCCACCAGAAGTCACGCTT...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCGGGTCAGAATCTCCTTaGAGGGAGGCCCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: QGGRLAMPSLKQHPWQGCGSESP*REARTA
Trigger: AGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGACCC...GCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCCCTTATAGCGGTCGCTaGGGACGTCGTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PLCPQPLVCREAAWRCPAPYSGR*GRRWQW
Trigger: CCACTGCCAACGACGTCCCCAGCGACCGCTATAAGG...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACGGGCGAAGTAGATGGTaGGGAAGCCCTCCACCTTAT +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHGRSRW*GSPPPY
Trigger: ATAAGGTGGAGGGCTTCCCCACCATCTACTTCGCCC...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCTTGCCGGCCTCGGCGTaGACGCCCCGACCATGGGCC +
Preference number: 4 (lower is better)
Translates to: KESEILSFVAGLGVDAPTLPASA*TPRPWA
Trigger: GGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAA...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGAAACAGCACCCCTaGCAGGGCTGCTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRLKQHP*QGCSVA
Trigger: TGCCACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAG...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCTGCCACGTGGGTaGCCTCTCCCTGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAGLPRG*PLPGAE
Trigger: CTCAGCTCCAGGGAGAGGCCACCCACGTGGCAGCCC...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGGGGGCTCTCAAGAGGTaGGGCTGCCACGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWGALKR*GCHVGG
Trigger: GCCACCCACGTGGCAGCCCCACCTCTTGAGAGCCCC...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTTTGATGGCCGAGTCCTaGGTGGAGCCCTGGACGTCC +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPLMAES*VEPWTS
Trigger: GGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAA...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652332.1
CDS-3UTR TCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAGGAGAACGCTTGCTaGGCTCCTTGGCGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPEENAC*APWRPS
Trigger: AGAAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTC...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACCGGAGCAAACTGCTTaGAATGTCCACACCATGGAG +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPPEQTA*NVHTME
Trigger: CTCCATGGTGTGGACATTGCAAGCAGTTTGCTCCGG...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCGGTGGCGTCGACCTTTaGCAGGGGAATTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: QGGRLAMPSLKQHPWQGCGGVDL*QGNWRR
Trigger: TCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACC...GCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACAGGAACTCCTGGACCTaGTTCAGGGTCAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHRNSWT*FRVRIS
Trigger: GGAGATTCTGACCCTGAAGCAGGTCCAGGAGTTCCT...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTaGTCAGTGGCAGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQHPWQG*SVAALT
Trigger: AGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGGGTG...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCTCAAGAGGTGGGGCTaGCACGTGGGTGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWLKRWG*HVGGLS
Trigger: GGAGAGGCCACCCACGTGGCAGCCCCACCTCTTGAG...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGGCGTCCAGTCGGGCTaGGAGACTTCTCTGACCTTG +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPGVQSG*ETSLTL
Trigger: CAAGGTCAGAGAAGTCTCCCAGCCCGACTGGACGCC...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCATGGCCGAGTCCTGGGTaGAGCCCTGCTGGACGTCCA +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAWPSPG*SPAGRP
Trigger: TGGACGTCCAGCAGGGCTCCACCCAGGACTCGGCCA...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS-3UTR CCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCAATGACCAGGCCCTTTTaGCCCTTGTACTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPMTRPF*PLYFLA
Trigger: GGCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCAT...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTTGGGGGCGAAGTAGATaGTGGGGAAGCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPWGRSR*WGSPPP
Trigger: AGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCA...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGTTTGCCCCCAGCCCTTaGTTTGCAGGGAGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQFAPSP*FAGRPP
Trigger: AGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAA...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTTTTCTGCTCCGGCACTaGGGGCTCTCAAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPFLLRH*GLSRGG
Trigger: CCCACCTCTTGAGAGCCCCCAGTGCCGGAGCAGAAA...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCCACTCACATCAAACCTaGTGGCCAGCACAGACGCTG +
Preference number: 4 (lower is better)
Translates to: QGGRLAMPSLKQHPWQGCHSHQT*WPAQTL
Trigger: CAGCGTCTGTGCTGGCCAGCAGGTTTGATGTGAGTG...GCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTCATCGTTTGACACCTTaGGGTGGCCAACCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPHRLTP*GGQPGA
Trigger: TGCCCCTGGTTGGCCACCGCAAGGTGTCAAACGATG...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTTGGATCATGCCCCTTTaGCCCCAGCCCTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPWIMPL*PQPLVC
Trigger: GCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCA...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGTCCAGGGTCCTTTCTaGTCCGGCACTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLVQGPF*SGTGGS
Trigger: AGAGCCCCCAGTGCCGGAGCAGAAAGGACCCTGGAC...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGGTCCAGGGTCCTTTCTaGTCCGGCACTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWVQGPF*SGTGGS
Trigger: AGAGCCCCCAGTGCCGGAGCAGAAAGGACCCTGGAC...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACGTATTGCTGGTAGGCTaGGTCACTCTCCCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHVLLVG*VTLPLK
Trigger: TTTAAGGGGGAGAGTGACCCAGCCTACCAGCAATAC...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGTTTGACACCTTGCGGTaGCCAACCAGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLFDTLR*PTRGRA
Trigger: CGCCCTGCCCCTGGTTGGCCACCGCAAGGTGTCAAA...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGCGCTGGGGACGTCGTTaGCAGTGGCGTCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLRWGRR*QWRPSW
Trigger: CCAAGATGGACGCCACTGCCAACGACGTCCCCAGCG...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCGGGCGAAGTAGATGGTaGGGAAGCCCTCCACCTTAT +
Preference number: 4 (lower is better)
Translates to: PLCPQPLVCREAAWRCPAGRSRW*GSPPPY
Trigger: ATAAGGTGGAGGGCTTCCCCACCATCTACTTCGCCC...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCATGGCCGAGTCCTGGGTaGAGCCCTGGACGTCCATCA +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAWPSPG*SPGRPS
Trigger: TGATGGACGTCCAGGGCTCCACCCAGGACTCGGCCA...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652332.1
3UTR CAA 72 bp ACCCTGGATCATGCCCCTTTGCCCCCAGCCCTTGGTTaGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: TLDHAPLPPALG*QGGRLAMPSLK
Trigger: TTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCAGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATAGCGTCGGCGGCCGCTaGGCGCACCGAGAACTCGGG +
Preference number: 4 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNSVGGR*AHRELG
Trigger: CCCGAGTTCTCGGTGCGCTCAGCGGCCGCCGACGCT...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGTCAGCACGAAGTCCTTaGTGGCCGAGTCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLSARSP*WPSPGW
Trigger: CCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGA...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTTTCCCACCACGACCTTaGCGGGTCCCTTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPFPPRP*RVPCCS
Trigger: AGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAA...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCTGGCGATGCCCAGCCTaGAACAGCACCCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KESEILSFVAGLGVDAPTWRCPA*NSTPGR
Trigger: CCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCA...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGTCCTGGGTGGAGCCCTaGTGGACGTCCATCATGTGG +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWSWVEP*WTSIMW
Trigger: CCACATGATGGACGTCCAGCAGGGCTCCACCCAGGA...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS-3UTR GCA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGTACACGGGCTCTAGCTaGTTGCAGTGCCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQYTGSS*LQCPHH
Trigger: ATGGTGCGGGCACTGCAAGCAGCTAGAGCCCGTGTA...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCCTCAAGAGGTGGGGCTaGCACGTGGGTGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KESEILSFVAGLGVDAPTLKRWG*HVGGLS
Trigger: GGAGAGGCCACCCACGTGGCAGCCCCACCTCTTGAG...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACAGGTTGCATCGATCTTaGCAACAGGAATGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHRLHRS*QQEWED
Trigger: ATCCTCCCATTCCTGTTGCCAAGATCGATGCAACCT...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGCACAAGCGTGACTTCTaGTGGAGGCGTCCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLHKRDF*WRRPVG
Trigger: CCCGACTGGACGCCTCCACCAGAAGTCACGCTTGTG...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGCAGTGTCCACACCATaGGGCATAAAACTCCACCAG +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRAVSTP*GIKLHQ
Trigger: CTGGTGGAGTTTTATGCCCCATGGTGTGGACACTGC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGTCTGTTTCTGCGGTaGCGTCGACCTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAGLFLR*RRPLPG
Trigger: CCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACC...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCCTCTTCGTCCGCAATaGCAAAGGTGTACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRPLRPQ*QRCTQG
Trigger: TCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGG...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGGCAGTGCCCGCACCATaGCGCGTAGAACTCGATGAG +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWAVPAP*RVELDE
Trigger: CTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGC...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGCCTTATAGCGGTCGCTaGGGACGTCGTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLPYSGR*GRRWQW
Trigger: CCACTGCCAACGACGTCCCCAGCGACCGCTATAAGG...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCATGGGGGCGAAGTAGATaGTGGGGAAGCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAWGRSR*WGSPPP
Trigger: AGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCA...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCACTGAAACAGCACCCCTaGCAGGGCTGCTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHALKQHP*QGCSVA
Trigger: TGCCACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAG...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGTTTCTGCTCCGGCACTaGGGGCTCTCAAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLFLLRH*GLSRGG
Trigger: CCCACCTCTTGAGAGCCCCCAGTGCCGGAGCAGAAA...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCATGGTCAACACAAGCGTaGCTTCTGGTGGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAWSTQA*LLVEAS
Trigger: GGACGCCTCCACCAGAAGTCACGCTTGTGTTGACCA...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGCGCTTAGCATCGTTTaGCACCTTGCGGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAALSIV*HLAVAN
Trigger: GTTGGCCACCGCAAGGTGTCAAACGATGCTAAGCGC...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCGCGTAGAACTCGATaGGGACGTCCTTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLARRTR*GRPSWG
Trigger: ACCCCAAGAAGGACGTCCTCATCGAGTTCTACGCGC...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGTGGCGTCGACCTTTaGCAGGGGAATTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAGGVDL*QGNWRR
Trigger: TCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACC...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGTCACATCAAACCTGCTaGCCAGCACAGACGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQSHQTC*PAQTLR
Trigger: CCTCAGCGTCTGTGCTGGCCAGCAGGTTTGATGTGA...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCAACAACCAACTGCCCCTaGGAGACTTTCAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPTTNCP*ETFKNF
Trigger: AAAGTTCTTGAAAGTCTCCCAGGGGCAGTTGGTTGT...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGTGGACGTCCATCATGTaGCTCCGGGGCTCATACTTG +
Preference number: 4 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQWTSIM*LRGSYL
Trigger: CAAGTATGAGCCCCGGAGCCACATGATGGACGTCCA...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGTTGTTCTTGGGCACTaGCTGGGATTTGATGACTGG +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRVVLGH*LGFDDW
Trigger: CCAGTCATCAAATCCCAGCCAGTGCCCAAGAACAAC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGCGCAGTATCTGCCTCTaGGTCCAGGGTCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLRSICL*VQGPFC
Trigger: GCAGAAAGGACCCTGGACCCAGAGGCAGATACTGCG...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGTTCCCACCACGACCTTaGCGGGTCCCTTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWFPPRP*RVPCCS
Trigger: AGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAA...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTGCATTACAACCAACTaGCCCTGGGAGACTTTCAAG +
Preference number: 4 (lower is better)
Translates to: QGGRLAMPSLKQHPWQGCCITTN*PWETFK
Trigger: CTTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCA...GCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGGAATTTCTCAGGCTaGATTACAACCAACTGCCCC +
Preference number: 4 (lower is better)
Translates to: PLCPQPLVCREAAWRCPAWNFSG*ITTNCP
Trigger: GGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCA...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTCCACCTCTAGGACTTTaGTCCGCCAAAACTGAGTTG +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPPPLGL*SAKTEL
Trigger: CAACTCAGTTTTGGCGGAGCAAAGTCCTAGAGGTGG...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGCTCTTCCTTGGTCCTaGTCAGTTTTGTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRALPWS*SVLWHV
Trigger: AACATGCCACAAAACTGAGCAGGACCAAGGAAGAGC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACGTGTTTTATTCCATTaGCACAGCCTACTCTACCTT +
Preference number: 4 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPRVLFH*HSLLYL
Trigger: AAGGTAGAGTAGGCTGTGGCAATGGAATAAAACACG...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCCACAAGCGTGACTTCTaGTGGAGGCGTCCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: KESEILSFVAGLGVDAPTHKRDF*WRRPVG
Trigger: CCCGACTGGACGCCTCCACCAGAAGTCACGCTTGTG...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCTTTGCCAGGGGAATTaGAGGAGAACGCTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQLCQGN*RRTLAE
Trigger: CTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAG...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCGGTCTGTTTCTGCGGTaGCGTCGACCTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KESEILSFVAGLGVDAPTGLFLR*RRPLPG
Trigger: CCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACC...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACGGAAAATTTTCAGGGTaGGATAGCCAGAGACATCAA +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHGKFSG*DSQRHQ
Trigger: TTGATGTCTCTGGCTATCCCACCCTGAAAATTTTCC...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTTCCTTCAGGAACTCCTaGACCTGCTTCAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSSFRNS*TCFRVR
Trigger: TCTGACCCTGAAGCAGGTCCAGGAGTTCCTGAAGGA...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCCTCTTCGTCCGCAATaGCAAAGGTGTACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQPLRPQ*QRCTQG
Trigger: TCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGG...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCGCAGTGCCCGCACCATaGCGCGTAGAACTCGATGAG +
Preference number: 4 (lower is better)
Translates to: KESEILSFVAGLGVDAPTAVPAP*RVELDE
Trigger: CTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGC...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGAGGAACTCCTGGACCTaGTTCAGGGTCAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWRNSWT*FRVRIS
Trigger: GGAGATTCTGACCCTGAAGCAGGTCCAGGAGTTCCT...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTTGGAATTTCTCAGGCTaGATTACAACCAACTGCCCC +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPWNFSG*ITTNCP
Trigger: GGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCA...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGCGGGCTCTAGCTGCTTaGAGTGCCCGCACCATGGCG +
Preference number: 4 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRRALAA*SARTMA
Trigger: CGCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCCG...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCTACACGGGCTCTAGCTaGTTGCAGTGCCCGCACCAT +
Preference number: 4 (lower is better)
Translates to: KESEILSFVAGLGVDAPTYTGSS*LQCPHH
Trigger: ATGGTGCGGGCACTGCAAGCAGCTAGAGCCCGTGTA...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCTTTGCCAGGGGAATTaGAGGAGAACGCTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWLCQGN*RRTLAE
Trigger: CTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAG...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGGCTCATACTTGGACTaGAATTTCTCAGGCTGCATT +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRGSYLD*NFSGCI
Trigger: AATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGACTCAGGGAAGTCCTTaGCCACCTCTAGGACTTTGC +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLTQGSP*PPLGLC
Trigger: GCAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGT...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGACTCCTCTGGCTCCATaGCGAACTTCTTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWTPLAP*RTSSHS
Trigger: AGAGTGGGAAGAAGTTCGCCATGGAGCCAGAGGAGT...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTTTCTTGGGCACTGGCTaGGATTTGATGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSFLGTG*DLMTGF
Trigger: GAAGCCAGTCATCAAATCCCAGCCAGTGCCCAAGAA...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTTGGGGTCCATCACAATaGAGTCAAAGGTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPWGPSQ*SQRSFP
Trigger: TGGGAAAGACCTTTGACTCCATTGTGATGGACCCCA...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAATGACCAGGCCCTTTTaGCCCTTGTACTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAMTRPF*PLYFLA
Trigger: GGCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCAT...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACCACCAGAATGATATCTaGATCATTCACAACTTCATC +
Preference number: 4 (lower is better)
Translates to: PRRGRPDHGPRRASASSHHQNDI*IIHNFI
Trigger: GATGAAGTTGTGAATGATGCAGATATCATTCTGGTG...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCACCACCTCTAGGACTTTaGTCCGCCAAAACTGAGTTG +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAPPLGL*SAKTEL
Trigger: CAACTCAGTTTTGGCGGAGCAAAGTCCTAGAGGTGG...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTGCTCTTCCTTGGTCCTaGTCAGTTTTGTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSALPWS*SVLWHV
Trigger: AACATGCCACAAAACTGAGCAGGACCAAGGAAGAGC...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGCCACCCCGCAGTATCTaGCTCTGGGTCCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRPPRSI*LWVQGP
Trigger: AGGACCCTGGACCCAGAGGCAGATACTGCGGGGTGG...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCCGTGTTTTATTCCATTaGCACAGCCTACTCTACCTT +
Preference number: 4 (lower is better)
Translates to: QGGRLAMPSLKQHPWQGCRVLFH*HSLLYL
Trigger: AAGGTAGAGTAGGCTGTGGCAATGGAATAAAACACG...GCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGAGACATCAAACCTCTTaGCCAGGTCTGTTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLRHQTS*PGLFLR
Trigger: CCGCAGAAACAGACCTGGCCAAGAGGTTTGATGTCT...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTTCCATATTTTTCTCGTaGGCCGTTGTAGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRSIFFS*AVVVIR
Trigger: CCTTATGACTACAACGGCCCACGAGAAAAATATGGA...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGTATTGCTGGTAGGCTaGGTCACTCTCCCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAVLLVG*VTLPLK
Trigger: TTTAAGGGGGAGAGTGACCCAGCCTACCAGCAATAC...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGGCTCATACTTGGACTaGAATTTCTCAGGCTGCATT +
Preference number: 4 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPGSYLD*NFSGCI
Trigger: AATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCC...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGTTCTTGGGCACTGGCTaGGATTTGATGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWFLGTG*DLMTGF
Trigger: GAAGCCAGTCATCAAATCCCAGCCAGTGCCCAAGAA...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGTTGTTCTTGGGCACTaGCTGGGATTTGATGACTGG +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLVVLGH*LGFDDW
Trigger: CCAGTCATCAAATCCCAGCCAGTGCCCAAGAACAAC...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGGGCCAGGTCTGTTTCTaGGGTGGCGTCGACCTTTGC +
Preference number: 4 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRGQVCF*GGVDLC
Trigger: GCAAAGGTCGACGCCACCGCAGAAACAGACCTGGCC...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATAAGCGTGACTTCTGGTaGAGGCGTCCAGTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNKRDFW*RRPVGL
Trigger: CAGCCCGACTGGACGCCTCCACCAGAAGTCACGCTT...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCGCAGTGTCCACACCATaGGGCATAAAACTCCACCAG +
Preference number: 4 (lower is better)
Translates to: KESEILSFVAGLGVDAPTAVSTP*GIKLHQ
Trigger: CTGGTGGAGTTTTATGCCCCATGGTGTGGACACTGC...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCACTCAGGGAAGTCCTTaGCCACCTCTAGGACTTTGC +
Preference number: 4 (lower is better)
Translates to: KESEILSFVAGLGVDAPTTQGSP*PPLGLC
Trigger: GCAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGT...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGTGGGGTCCATCACAATaGAGTCAAAGGTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWWGPSQ*SQRSFP
Trigger: TGGGAAAGACCTTTGACTCCATTGTGATGGACCCCA...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTTTCAAAGCTCTTCCTTaGTCCTGCTCAGTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSFKALP*SCSVLW
Trigger: CCACAAAACTGAGCAGGACCAAGGAAGAGCTTTGAA...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATTCCTGGGTGGAGCCCTaGACGTCCATCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNSWVEP*TSIMWL
Trigger: GAGCCACATGATGGACGTCCAGGGCTCCACCCAGGA...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652332.1
CDS-3UTR TCA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTTTGCTATTTCTGTGCTaGAAGTGTGGTGAAATTTGT +
Preference number: 4 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRLLFLC*KCGEIC
Trigger: ACAAATTTCACCACACTTTCAGCACAGAAATAGCAA...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGGCGCGTAGAACTCGATaGGGACGTCCTTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRARRTR*GRPSWG
Trigger: ACCCCAAGAAGGACGTCCTCATCGAGTTCTACGCGC...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCTTTCTTCCTGGGTTCTaGAGCCCTCGTAGTCTACAG +
Preference number: 4 (lower is better)
Translates to: KESEILSFVAGLGVDAPTFLPGF*SPRSLQ
Trigger: CTGTAGACTACGAGGGCTCCAGAACCCAGGAAGAAA...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTGGAAAATTTTCAGGGTaGGATAGCCAGAGACATCAA +
Preference number: 4 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSGKFSG*DSQRHQ
Trigger: TTGATGTCTCTGGCTATCCCACCCTGAAAATTTTCC...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGACAACCAACTGCCCCTaGGAGACTTTCAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWTTNCP*ETFKNF
Trigger: AAAGTTCTTGAAAGTCTCCCAGGGGCAGTTGGTTGT...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGTTCAAAGCTCTTCCTTaGTCCTGCTCAGTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLFKALP*SCSVLW
Trigger: CCACAAAACTGAGCAGGACCAAGGAAGAGCTTTGAA...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGCTCTGTAATCAAAGCTaGAGTCCACACTGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLLCNQS*SPHCSR
Trigger: TCTACTACAGTGTGGACTTCAGCTTTGATTACAGAG...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGTGGACGTCCATCATGTaGCTCCGGGGCTCATACTTG +
Preference number: 4 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRWTSIM*LRGSYL
Trigger: CAAGTATGAGCCCCGGAGCCACATGATGGACGTCCA...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTACCCTCAAATTTAACTaGGTTCTTTTTGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSTLKFN*VLFVPT
Trigger: AGTGGGGACAAAAAGAACCCAGTTAAATTTGAGGGT...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTAAAACTCCACCAGAATaGTATCTGCATCATTCACAA +
Preference number: 4 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSKTPPE*YLHHSQ
Trigger: TTGTGAATGATGCAGATATCATTCTGGTGGAGTTTT...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGCCGGAGCAAACTGCTTaGAATGTCCACACCATGGAG +
Preference number: 4 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRPEQTA*NVHTME
Trigger: CTCCATGGTGTGGACATTGCAAGCAGTTTGCTCCGG...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGACCCTCAAATTTAACTaGGTTCTTTTTGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWTLKFN*VLFVPT
Trigger: AGTGGGGACAAAAAGAACCCAGTTAAATTTGAGGGT...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCATCAGTATTCAGAGCATaGAGTGAAACACCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHASVFRA*SETPKY
Trigger: ATACTTTGGTGTTTCACTTCATGCTCTGAATACTGA...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCACACCAGAATGATATCTaGATCATTCACAACTTCATC +
Preference number: 4 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAHQNDI*IIHNFI
Trigger: GATGAAGTTGTGAATGATGCAGATATCATTCTGGTG...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATAGACATCAAACCTCTTaGCCAGGTCTGTTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNRHQTS*PGLFLR
Trigger: CCGCAGAAACAGACCTGGCCAAGAGGTTTGATGTCT...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGTCCGGGGCTCATACTTaGACTGGAATTTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRSGAHT*TGISQA
Trigger: AGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGA...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATTGCATTACAACCAACTaGCCCTGGGAGACTTTCAAG +
Preference number: 4 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNCITTN*PWETFK
Trigger: CTTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCA...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAATTGCCGGCCTCGGCGTaGACGCCCCGACCATGGGCC +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKLPASA*TPRPWA
Trigger: GGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAA...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCTATTCAGTCATTCATaGTTATTCAGTATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWLFSHS*LFSIQS
Trigger: GCTCTGAATACTGAATAACCATGAATGACTGAATAG...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGTCCATATTTTTCTCGTaGGCCGTTGTAGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRSIFFS*AVVVIR
Trigger: CCTTATGACTACAACGGCCCACGAGAAAAATATGGA...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAACGGGCTCTAGCTGCTTaGAGTGCCCGCACCATGGCG +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKRALAA*SARTMA
Trigger: CGCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCCG...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp ACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAGCAAAGGGGACCCTGGATCATaGCCCTTTGCCCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: TYQKPNLRQQFLRQRKSKGDPGS*PFAPSP
Trigger: AGGGCTGGGGGCAAAGGGGCATGATCCAGGGTCCCC...TTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp ACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAGCAAAGAGGAGAACGCTTGCTaGGCTCCTTGGCGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TYQKPNLRQQFLRQRKSKEENAC*APWRPS
Trigger: AGAAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTC...TTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp ACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAGCAAACGTCCATCTTGGCGATaGCCAGGCCCTTTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TYQKPNLRQQFLRQRKSKRPSWR*PGPFGP
Trigger: AGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACG...TTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAGGCGTCCAGTCGGGCTaGGAGACTTCTCTGACCTTG +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKGVQSG*ETSLTL
Trigger: CAAGGTCAGAGAAGTCTCCCAGCCCGACTGGACGCC...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAACATCGTTTGACACCTTaGGGTGGCCAACCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKHRLTP*GGQPGA
Trigger: TGCCCCTGGTTGGCCACCGCAAGGTGTCAAACGATG...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAATGGATCATGCCCCTTTaGCCCCAGCCCTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKWIMPL*PQPLVC
Trigger: GCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCA...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp ACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAGCAAATCCTTCAGGAACTCCTaGACCTGCTTCAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TYQKPNLRQQFLRQRKSKSFRNS*TCFRVR
Trigger: TCTGACCCTGAAGCAGGTCCAGGAGTTCCTGAAGGA...TTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp ACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAGCAAAACTCCTCTGGCTCCATaGCGAACTTCTTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: TYQKPNLRQQFLRQRKSKTPLAP*RTSSHS
Trigger: AGAGTGGGAAGAAGTTCGCCATGGAGCCAGAGGAGT...TTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAATTTCTTCCTGGGTTCTaGAGCCCTCGTAGTCTACAG +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKFLPGF*SPRSLQ
Trigger: CTGTAGACTACGAGGGCTCCAGAACCCAGGAAGAAA...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAATCCGGGGCTCATACTTaGACTGGAATTTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKSGAHT*TGISQA
Trigger: AGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGA...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR GCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAATATTCCGGAGCAAACTaGTTGCAATGTCCACACCAT +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKYSGAN*LQCPHH
Trigger: ATGGTGTGGACATTGCAAGCAGTTTGCTCCGGAATA...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAACTCTGTAATCAAAGCTaGAGTCCACACTGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKLCNQS*SPHCSR
Trigger: TCTACTACAGTGTGGACTTCAGCTTTGATTACAGAG...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAAAACTCCACCAGAATaGTATCTGCATCATTCACAA +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKKTPPE*YLHHSQ
Trigger: TTGTGAATGATGCAGATATCATTCTGGTGGAGTTTT...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
38% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAATTGCTATTTCTGTGCTaGAAGTGTGGTGAAATTTGT +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKLLFLC*KCGEIC
Trigger: ACAAATTTCACCACACTTTCAGCACAGAAATAGCAA...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR TCA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAATCAGTATTCAGAGCATaGAGTGAAACACCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKSVFRA*SETPKY
Trigger: ATACTTTGGTGTTTCACTTCATGCTCTGAATACTGA...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS TCA 90 bp CATGGTAGCGGGGGCGGAGCGCGGCCTCCTAGCGTCGGCGGCCGCTaGGCGCACCGAGAACTCGGGGTCTGGCCGACAGCCCGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: HGSGGGARPPSVGGR*AHRELGVWPTARRS
Trigger: GGAGCGACGGGCTGTCGGCCAGACCCCGAGTTCTCGGTGCGCTCAGCGGCCGCCGACGCTAGGAGGCCGCGCTCCGCCCCCGCTACCATG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCAGCAGTGGCGTCCATCTaGGCGATGACCAGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPAVASI*AMTRPF
Trigger: AAAGGGCCTGGTCATCGCCAAGATGGACGCCACTGC...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACAGCGGCATCCTGGTATaGCTGGTAGGCTGGGTCACT +
Preference number: 5 (lower is better)
Translates to: PRRGRPDHGPRRASASSHSGILV*LVGWVT
Trigger: AGTGACCCAGCCTACCAGCAATACCAGGATGCCGCT...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACTTGACGGGTCCCTTGTaGTTCTTGGGCACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PRRGRPDHGPRRASASSHLTGPL*FLGTGW
Trigger: CCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAA...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAAGTCGTCCCCGGCGATaGGCAGGGGGCGGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHASRPRR*AGGGGS
Trigger: ACTTCCTCCGCCCCCTGCCAATCGCCGGGGACGACT...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS-3UTR CAA 90 bp CCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCACTTTCCCACCACGACCTaGACGGGTCCCTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: PRRGRPDHGPRRASASSHFPTTT*TGPLLF
Trigger: GAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAA...GTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTACGGGCTCTAGCTGCTaGCAGTGCCCGCACCATGGC +
Preference number: 5 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSTGSSC*QCPHHG
Trigger: GCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCCGT...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp GCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTCTGCCTCCTCCCATGGCCCTTGTACTTCTaGGCCAGGCTGTTGTACACG +
Preference number: 5 (lower is better)
Translates to: ASAWTPRPWATQGVCLLPWPLYF*ARLLYT
Trigger: CGTGTACAACAGCCTGGCCAAGAAGTACAAGGGCCA...TGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTCCGAGATACTGTCGTTaGTTGCCGGCCTCGGCGTGG +
Preference number: 5 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPPRYCR*LPASAW
Trigger: CCACGCCGAGGCCGGCAACAAACGACAGTATCTCGG...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTACCTTGACGGGTCCCTaGTTGTTCTTGGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRTLTGP*LFLGTG
Trigger: GCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGT...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCACCTTGACGGGTCCCTaGTTGTTCTTGGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: PLCPQPLVCREAAWRCPATLTGP*LFLGTG
Trigger: GCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGT...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGACGGGCTCTAGCTGCTaGCAGTGCCCGCACCATGGC +
Preference number: 5 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWTGSSC*QCPHHG
Trigger: GCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCCGT...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGCACAGACGCTGAGGTaGCATCGATCTTGGCAACAG +
Preference number: 5 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRAQTLR*HRSWQQ
Trigger: CTGTTGCCAAGATCGATGCAACCTCAGCGTCTGTGC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTATTGGAGGAGAACGCTaGCTGAGCTCCTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSIGGER*LSSLAA
Trigger: GGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAAT...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCGGTGGCGTCGACCTTaGCCAGGGGAATTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWRWRRP*PGELEE
Trigger: CTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCG...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCGGTCCCTTGTTGTTCTaGGGCACTGGCTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: PLCPQPLVCREAAWRCPAGPLLF*GTGWDL
Trigger: CAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACC...GGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGGTCCCTTGTTGTTCTaGGGCACTGGCTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRGPLLF*GTGWDL
Trigger: CAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTGCAGTGGCGTCCATCTaGGCGATGACCAGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSAVASI*AMTRPF
Trigger: AAAGGGCCTGGTCATCGCCAAGATGGACGCCACTGC...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCATCGCTGGGGACGTCGTaGGCAGTGGCGTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHASLGTS*AVASIL
Trigger: CAAGATGGACGCCACTGCCAACGACGTCCCCAGCGA...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGAGATACTGTCGTTTGTaGCCGGCCTCGGCGTGGACG +
Preference number: 5 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQRYCRL*PASAWT
Trigger: CGTCCACGCCGAGGCCGGCAACAAACGACAGTATCT...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGCCGAGATACTGTCGTTaGTTGCCGGCCTCGGCGTGG +
Preference number: 5 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLPRYCR*LPASAW
Trigger: CCACGCCGAGGCCGGCAACAAACGACAGTATCTCGG...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCCTTTGCCCCCAGCCCTaGGTTTGCAGGGAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: KESEILSFVAGLGVDAPTLCPQP*VCREAA
Trigger: GGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAG...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS TCA 90 bp TGCGGTGGCCAACCAGGGGCAGGGCGTACTTCAGCACGAAGTCCTTaGTGGCCGAGTCCTGGGTGGAGCCCTGGACGTCCATCATGTGGC +
Preference number: 5 (lower is better)
Translates to: CGGQPGAGRTSARSP*WPSPGWSPGRPSCG
Trigger: GCCACATGATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGGTTGGCCACCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGCACAGACGCTGAGGTaGCATCGATCTTGGCAACAG +
Preference number: 5 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPAQTLR*HRSWQQ
Trigger: CTGTTGCCAAGATCGATGCAACCTCAGCGTCTGTGC...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCGCTTGCTGAGCTCCTaGGCGGCCTTCTCATACTCG +
Preference number: 5 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWRLLSS*AAFSYS
Trigger: CGAGTATGAGAAGGCCGCCAAGGAGCTCAGCAAGCG...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGATTGGAGGAGAACGCTaGCTGAGCTCCTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLIGGER*LSSLAA
Trigger: GGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAAT...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGAGACATCAAACCTCTaGGCCAGGTCTGTTTCTGCG +
Preference number: 5 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRETSNL*ARSVSA
Trigger: CGCAGAAACAGACCTGGCCAAGAGGTTTGATGTCTC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTAGCGGCATCCTGGTATaGCTGGTAGGCTGGGTCACT +
Preference number: 5 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSSGILV*LVGWVT
Trigger: AGTGACCCAGCCTACCAGCAATACCAGGATGCCGCT...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTACTCAGGGAAGTCCTaGGCCACCTCTAGGACTTTG +
Preference number: 5 (lower is better)
Translates to: QGGRLAMPSLKQHPWQGCYSGKS*ATSRTL
Trigger: CAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTA...GCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGTCCAGGATGGCGGCATaGACATCCTCCCCACTCTCG +
Preference number: 5 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWSRMAA*TSSPLS
Trigger: CGAGAGTGGGGAGGATGTCAATGCCGCCATCCTGGA...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGTCCAGGATGGCGGCATaGACATCCTCCCCACTCTCG +
Preference number: 5 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLSRMAA*TSSPLS
Trigger: CGAGAGTGGGGAGGATGTCAATGCCGCCATCCTGGA...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTTTTCCCACCACGACCTaGACGGGTCCCTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPFPTTT*TGPLLF
Trigger: GAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAA...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGAGGCCCTTTTGGCCCTaGTACTTCTTGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQRPFWP*YFLARL
Trigger: CAGCCTGGCCAAGAAGTACAAGGGCCAAAAGGGCCT...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS TCA 90 bp TGCGGTGGCCAACCAGGGGCAGGGCGTACTTCAGCACGAAGTCCTTaGTGGCCGAGTCCTGGGTGGAGCCCTGCTGGACGTCCATCATGT +
Preference number: 5 (lower is better)
Translates to: CGGQPGAGRTSARSP*WPSPGWSPAGRPSC
Trigger: ACATGATGGACGTCCAGCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGGTTGGCCACCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS TCA 90 bp GTAGACGACCACCAGGGGGCGCCTGGTGTAGCGCTTAGCATCGTTTaGCACCTTGCGGTGGCCAACCAGGGGCAGGGCGTACTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: VDDHQGAPGVALSIV*HLAVANQGQGVLQH
Trigger: GTGCTGAAGTACGCCCTGCCCCTGGTTGGCCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCGCCCCCTGGTGGTCGTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286091.9
ENST00000466592.1
ENST00000652332.1
CDS CCA 90 bp AGGGGCAGGGCGTACTTCAGCACGAAGTCCTTGATGGCCGAGTCCTaGGTGGAGCCCTGCTTCAAAGAGGGAACAGGTGAGGGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: RGRAYFSTKSLMAES*VEPCFKEGTGEGAH
Trigger: GTGGGCCCCCTCACCTGTTCCCTCTTTGAAGCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466592.1
CDS-3UTR CAA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGTTCAGCACGAAGTCCTaGATGGCCGAGTCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWFSTKS*MAESWV
Trigger: CACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAA...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCGGCACTGGCTGGGATTaGATGACTGGCTTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: QGGRLAMPSLKQHPWQGCGTGWD*MTGFSF
Trigger: AAAACTGAAGCCAGTCATCAAATCCCAGCCAGTGCC...GCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGTTGACGGGTCCCTTGTaGTTCTTGGGCACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWLTGPL*FLGTGW
Trigger: CCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAA...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGTTCTTGGCCAGGCTGTaGTACACGGGCTCTAGCTGC +
Preference number: 5 (lower is better)
Translates to: LGLQGGRLAMPSLKQHPWFLARL*YTGSSC
Trigger: GCAGCTAGAGCCCGTGTACAACAGCCTGGCCAAGAA...CCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGTTCTTGGCCAGGCTGTaGTACACGGGCTCTAGCTGC +
Preference number: 5 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLFLARL*YTGSSC
Trigger: GCAGCTAGAGCCCGTGTACAACAGCCTGGCCAAGAA...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGAGGCCCTTTTGGCCCTaGTACTTCTTGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLRPFWP*YFLARL
Trigger: CAGCCTGGCCAAGAAGTACAAGGGCCAAAAGGGCCT...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGGATGACCAGGCCCTTTaGGCCCTTGTACTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQDDQAL*ALVLLG
Trigger: GCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCATC...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTGAGGTTGCATCGATCTaGGCAACAGGAATGGGAGGA +
Preference number: 5 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSEVASI*ATGMGG
Trigger: TCCTCCCATTCCTGTTGCCAAGATCGATGCAACCTC...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTGAGACTTCTCTGACCTaGGCAACAATTTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRETSLT*ATISSW
Trigger: CCAGGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTC...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AAGGAATCCGAGATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCCGCTTGCTGAGCTCCTaGGCGGCCTTCTCATACTCG +
Preference number: 5 (lower is better)
Translates to: KESEILSFVAGLGVDAPTRLLSS*AAFSYS
Trigger: CGAGTATGAGAAGGCCGCCAAGGAGCTCAGCAAGCG...GGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCACTCCGGGGCTCATACTaGGACTGGAATTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHALRGSY*DWNFSG
Trigger: GCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAG...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTTACTCAGGGAAGTCCTaGGCCACCTCTAGGACTTTG +
Preference number: 5 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSYSGKS*ATSRTL
Trigger: CAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTA...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp ATACTGTCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCATGGCCCTTGTACTTCTaGGCCAGGCTGTTGTACACG +
Preference number: 5 (lower is better)
Translates to: ILSFVAGLGVDAPTMGHAWPLYF*ARLLYT
Trigger: CGTGTACAACAGCCTGGCCAAGAAGTACAAGGGCCA...TGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGCTTTGCCCCCAGCCCTaGGTTTGCAGGGAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRLCPQP*VCREAA
Trigger: GGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAG...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS GCA 90 bp TACTTCAGCACGAAGTCCTTGATGGCCGAGTCCTGGGTGGAGCCCTaGTTCAAAGAGGGAACAGGTGAGGGGGCCCACCATCTCCCCACC +
Preference number: 5 (lower is better)
Translates to: YFSTKSLMAESWVEP*FKEGTGEGAHHLPT
Trigger: GGTGGGGAGATGGTGGGCCCCCTCACCTGTTCCCTCTTTGAAGCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466592.1
CDS-3UTR CAA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGAGGTTGCATCGATCTaGGCAACAGGAATGGGAGGA +
Preference number: 5 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLEVASI*ATGMGG
Trigger: TCCTCCCATTCCTGTTGCCAAGATCGATGCAACCTC...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGGGCACTGGCTGGGATTaGATGACTGGCTTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: PPALGLQGGRLAMPSLKQGTGWD*MTGFSF
Trigger: AAAACTGAAGCCAGTCATCAAATCCCAGCCAGTGCC...CTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp TCGTTTGTTGCCGGCCTCGGCGTGGACGCCCCGACCATGGGCCACGCAGGGCGTTCGTGTTTTATTCCATaGCCACAGCCTACTCTACCT +
Preference number: 5 (lower is better)
Translates to: SFVAGLGVDAPTMGHAGRSCFIP*PQPTLP
Trigger: AGGTAGAGTAGGCTGTGGCAATGGAATAAAACACGA...ACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS TCA 90 bp CGGTGGCGTCGACCTTTGCCAGGGGAATTGGAGGAGAACGCTTGCTaGGCTCCTTGGCGGCCTTCTCATACTCGGGGGCAAGTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: RWRRPLPGELEENAC*APWRPSHTRGQVSC
Trigger: GCAAGAAACTTGCCCCCGAGTATGAGAAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 90 bp GGCCAGGTCTGTTTCTGCGGTGGCGTCGACCTTTGCCAGGGGAATTaGAGGAGAACGCTTGCTGAGCTCCTTGGCGGCCTTCTCATACTC +
Preference number: 5 (lower is better)
Translates to: GQVCFCGGVDLCQGN*RRTLAELLGGLLIL
Trigger: GAGTATGAGAAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATCGGTGGCGTCGACCTTaGCCAGGGGAATTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNRWRRP*PGELEE
Trigger: CTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCG...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATGCATCGTTTGACACCTaGCGGTGGCCAACCAGGGGC +
Preference number: 5 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNASFDT*RWPTRG
Trigger: GCCCCTGGTTGGCCACCGCAAGGTGTCAAACGATGC...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS GCA 90 bp ATCAAACCTCTTGGCCAGGTCTGTTTCTGCGGTGGCGTCGACCTTTaGCAGGGGAATTGGAGGAGAACGCTTGCTGAGCTCCTTGGCGGC +
Preference number: 5 (lower is better)
Translates to: IKPLGQVCFCGGVDL*QGNWRRTLAELLGG
Trigger: GCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACCTGGCCAAGAGGTTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 90 bp GGGTGGAGCCCTGGACGTCCATCATGTGGCTCCGGGGCTCATACTTaGACTGGAATTTCTCAGGCTGCATTACAACCAACTGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: GWSPGRPSCGSGAHT*TGISQAALQPTAPG
Trigger: CCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGTCCAGGGCTCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652332.1
CDS-3UTR CAA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGAGACTTCTCTGACCTaGGCAACAATTTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLETSLT*ATISSW
Trigger: CCAGGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTC...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGCTTCAAAGCTCTTCCTaGGTCCTGCTCAGTTTTGTG +
Preference number: 5 (lower is better)
Translates to: PWFAGRPPGDAQPETAPLLQSSS*VLLSFV
Trigger: CACAAAACTGAGCAGGACCAAGGAAGAGCTTTGAAG...CAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS GCA 90 bp CCGATGATGATGACATCGTCTCCATCCTTCAGGAACTCCTGGACCTaGTTCAGGGTCAGAATCTCCTTGGAGGGAGGCCCGGACTGCTCG +
Preference number: 5 (lower is better)
Translates to: PMMMTSSPSFRNSWT*FRVRISLEGGPDCS
Trigger: CGAGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGACCCTGAAGCAGGTCCAGGAGTTCCTGAAGGATGGAGACGATGTCATCATCATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 90 bp TGGAGCCCTGCTGGACGTCCATCATGTGGCTCCGGGGCTCATACTTaGACTGGAATTTCTCAGGCTGCATTACAACCAACTGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: WSPAGRPSCGSGAHT*TGISQAALQPTAPG
Trigger: CCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGTCCAGCAGGGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS CCA 90 bp GCCCCAGGTCCTTCACCTCCCCAGCATAGTCCTCTTCGTCCGCAATaGCAAAGGTGTACTCAGGGAAGTCCTTGGCCACCTCTAGGACTT +
Preference number: 5 (lower is better)
Translates to: APGPSPPQHSPLRPQ*QRCTQGSPWPPLGL
Trigger: AAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAGGTGAAGGACCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286091.9
ENST00000466592.1
ENST00000652332.1
CDS CCA 90 bp GAAAGCAGTGACAAACTCGCGGAGGGTGTCAGAGTCAAACTCCTCTaGCTCCATGGCGAACTTCTTCCCACTCTCGTCCAGGATGGCGGC +
Preference number: 5 (lower is better)
Translates to: ESSDKLAEGVRVKLL*LHGELLPTLVQDGG
Trigger: GCCGCCATCCTGGACGAGAGTGGGAAGAAGTTCGCCATGGAGCCAGAGGAGTTTGACTCTGACACCCTCCGCGAGTTTGTCACTGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286091.9
ENST00000466592.1
ENST00000652332.1
CDS TCA 90 bp GCTCTAGCTGCTTGCAGTGCCCGCACCATGGCGCGTAGAACTCGATaGGGACGTCCTTCTTGGGGTCCATCACAATGGAGTCAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: ALAACSARTMARRTR*GRPSWGPSQWSQRS
Trigger: AGACCTTTGACTCCATTGTGATGGACCCCAAGAAGGACGTCCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCAGCTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCTTTGCCCCCAGCCCTTGGTTTGCAGGGAGGCCGCCTGGCGATGCCCAGCCTTTCAGTTTTCCTTTTTaGAAAGCAGTGACAAACTCG +
Preference number: 5 (lower is better)
Translates to: PFAPSPWFAGRPPGDAQPFSFPF*KAVTNS
Trigger: CGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGAA...AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATGATGACCAGGCCCTTTaGGCCCTTGTACTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNDDQAL*ALVLLG
Trigger: GCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCATC...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGGCCGCCTGGCGATGCCCAGCCTGAAACAGCACCCCTGGCAGGGCTGCTCAGTTGTTCTTCTATAAACTaGCTCAAATGCTCCAGATCT +
Preference number: 5 (lower is better)
Translates to: RPPGDAQPETAPLAGLLSCSSIN*LKCSRS
Trigger: AGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACA...ACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 90 bp TTGGTCAACACAAGCGTGACTTCTGGTGGAGGCGTCCAGTCGGGCTaGGAGACTTCTCTGACCTTGGCAACAATTTCTTCCTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: LVNTSVTSGGGVQSG*ETSLTLATISSWVL
Trigger: CAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTCCCAGCCCGACTGGACGCCTCCACCAGAAGTCACGCTTGTGTTGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 90 bp AGTCCTCTTCGTCCGCAATGGCAAAGGTGTACTCAGGGAAGTCCTTaGCCACCTCTAGGACTTTGCTCCGCCAAAACTGAGTTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SPLRPQWQRCTQGSP*PPLGLCSAKTELQL
Trigger: GAGCTGCAACTCAGTTTTGGCGGAGCAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286091.9
ENST00000466592.1
ENST00000652332.1
CDS CCA 90 bp CATCCTTCAGGAACTCCTGGACCTGCTTCAGGGTCAGAATCTCCTTaGAGGGAGGCCCGGACTGCTCGATCATGTAATCAACGATTCCAT +
Preference number: 5 (lower is better)
Translates to: HPSGTPGPASGSESP*REARTARSCNQRFH
Trigger: ATGGAATCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGACCCTGAAGCAGGTCCAGGAGTTCCTGAAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATCTTCAAAGCTCTTCCTaGGTCCTGCTCAGTTTTGTG +
Preference number: 5 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNLQSSS*VLLSFV
Trigger: CACAAAACTGAGCAGGACCAAGGAAGAGCTTTGAAG...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAACCCCCAGCCCTTGGTTaGCAGGGAGGCCGCCTGGCG +
Preference number: 5 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKPPALG*QGGRLA
Trigger: CGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp ACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAGCAAACCCCCAGCCCTTGGTTaGCAGGGAGGCCGCCTGGCG +
Preference number: 5 (lower is better)
Translates to: TYQKPNLRQQFLRQRKSKPPALG*QGGRLA
Trigger: CGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGG...TTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 90 bp ATCTTCTCTCAGGTTGTTAGCGGCATCCTGGTATTGCTGGTAGGCTaGGTCACTCTCCCCCTTAAAGACCCCGATGATGATGACATCGTC +
Preference number: 5 (lower is better)
Translates to: IFSQVVSGILVLLVG*VTLPLKDPDDDDIV
Trigger: GACGATGTCATCATCATCGGGGTCTTTAAGGGGGAGAGTGACCCAGCCTACCAGCAATACCAGGATGCCGCTAACAACCTGAGAGAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CCCTGGCAGGGCTGCTCAGTGGCAGCTCTCACTTTGTGCTCAACAGGAAGCAATTCGTGTTTTATTCCATaGCCACAGCCTACTCTACCT +
Preference number: 5 (lower is better)
Translates to: PWQGCSVAALTLCSTGSNSCFIP*PQPTLP
Trigger: AGGTAGAGTAGGCTGTGGCAATGGAATAAAACACGA...ATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS GCA 90 bp ATCATGTGGCTCCGGGGCTCATACTTGGACTGGAATTTCTCAGGCTaGATTACAACCAACTGCCCCTGGGAGACTTTCAAGAACTTTGCT +
Preference number: 5 (lower is better)
Translates to: IMWLRGSYLDWNFSG*ITTNCPWETFKNFA
Trigger: AGCAAAGTTCTTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 90 bp GGCCGTTGTAGTCATAAGGCCTTCCTTTGCGGAAAATTTTCAGGGTaGGATAGCCAGAGACATCAAACCTCTTGGCCAGGTCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: GRCSHKAFLCGKFSG*DSQRHQTSWPGLFL
Trigger: CAGAAACAGACCTGGCCAAGAGGTTTGATGTCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTATGACTACAACGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAGCATCGTTTGACACCTaGCGGTGGCCAACCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKASFDT*RWPTRG
Trigger: GCCCCTGGTTGGCCACCGCAAGGTGTCAAACGATGC...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAATCGCTGGGGACGTCGTaGGCAGTGGCGTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKSLGTS*AVASIL
Trigger: CAAGATGGACGCCACTGCCAACGACGTCCCCAGCGA...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp CACAGCCTACTCTACCTTTTCTACCACCCCGCAGTATCTGCCTCTGGGTCCAGGTGTTCTTCTATAAACTaGCTCAAATGCTCCAGATCT +
Preference number: 5 (lower is better)
Translates to: HSLLYLFYHPAVSASGSRCSSIN*LKCSRS
Trigger: AGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACA...CCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 90 bp CATCAAACCTGCTGGCCAGCACAGACGCTGAGGTTGCATCGATCTTaGCAACAGGAATGGGAGGATCTTTATCCTTTAATATGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: HQTCWPAQTLRLHRS*QQEWEDLYPLICWQ
Trigger: TTGCCAACATATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGATGCAACCTCAGCGTCTGTGCTGGCCAGCAGGTTTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp ACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAGCAAATTCAGCACGAAGTCCTaGATGGCCGAGTCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: TYQKPNLRQQFLRQRKSKFSTKS*MAESWV
Trigger: CACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAA...TTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAACTCCGGGGCTCATACTaGGACTGGAATTTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKLRGSY*DWNFSG
Trigger: GCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAG...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp ACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAGCAAAGAGACATCAAACCTCTaGGCCAGGTCTGTTTCTGCG +
Preference number: 5 (lower is better)
Translates to: TYQKPNLRQQFLRQRKSKETSNL*ARSVSA
Trigger: CGCAGAAACAGACCTGGCCAAGAGGTTTGATGTCTC...TTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp ACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAAAGCAAAATGAGGACGTCCTTCTaGGGGTCCATCACAATGGAG +
Preference number: 5 (lower is better)
Translates to: TYQKPNLRQQFLRQRKSKMRTSF*GSITME
Trigger: CTCCATTGTGATGGACCCCAAGAAGGACGTCCTCAT...TTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS GCA 90 bp AGGCTGCATTACAACCAACTGCCCCTGGGAGACTTTCAAGAACTTTaGTATTTCTGTGCTGAAAGTGTGGTGAAATTTGTAATCTTCTCT +
Preference number: 5 (lower is better)
Translates to: RLHYNQLPLGDFQEL*YFCAESVVKFVIFS
Trigger: AGAGAAGATTACAAATTTCACCACACTTTCAGCACAGAAATAGCAAAGTTCTTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS-3UTR CAA 90 bp AGAAACACATACCAGAAGCCAAATCTACGCCAACAATTTCTCAGACAACGAAAATTCAGTTTTCCTTTTTaGAAAGCAGTGACAAACTCG +
Preference number: 5 (lower is better)
Translates to: RNTYQKPNLRQQFLRQRKFSFPF*KAVTNS
Trigger: CGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGAA...TTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS TCA 72 bp GGGGGCGGAGCGCGGCCTCCTAGCGTCGGCGGCCGCTaGGCGCACCGAGAACTCGGGGTCTGGCCGACAGCC +
Preference number: 6 (lower is better)
Translates to: GGGARPPSVGGR*AHRELGVWPTA
Trigger: GGCTGTCGGCCAGACCCCGAGTTCTCGGTGCGCTCAGCGGCCGCCGACGCTAGGAGGCCGCGCTCCGCCCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS TCA 72 bp CACCAGGGGGCGCCTGGTGTAGCGCTTAGCATCGTTTaGCACCTTGCGGTGGCCAACCAGGGGCAGGGCGTA +
Preference number: 6 (lower is better)
Translates to: HQGAPGVALSIV*HLAVANQGQGV
Trigger: TACGCCCTGCCCCTGGTTGGCCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCGCCCCCTGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286091.9
ENST00000466592.1
ENST00000652332.1
CDS CAA 72 bp CCAACCAGGGGCAGGGCGTACTTCAGCACGAAGTCCTaGATGGCCGAGTCCTGGGTGGAGCCCTGGACGTCC +
Preference number: 6 (lower is better)
Translates to: PTRGRAYFSTKS*MAESWVEPWTS
Trigger: GGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGGTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652332.1
CDS TCA 72 bp CAACCAGGGGCAGGGCGTACTTCAGCACGAAGTCCTTaGTGGCCGAGTCCTGGGTGGAGCCCTGGACGTCCA +
Preference number: 6 (lower is better)
Translates to: QPGAGRTSARSP*WPSPGWSPGRP
Trigger: TGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652332.1
CDS CAA 90 bp TTGCGGTGGCCAACCAGGGGCAGGGCGTACTTCAGCACGAAGTCCTaGATGGCCGAGTCCTGGGTGGAGCCCTGCTGGACGTCCATCATG +
Preference number: 6 (lower is better)
Translates to: LRWPTRGRAYFSTKS*MAESWVEPCWTSIM
Trigger: CATGATGGACGTCCAGCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGGTTGGCCACCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS CAA 90 bp TTGCGGTGGCCAACCAGGGGCAGGGCGTACTTCAGCACGAAGTCCTaGATGGCCGAGTCCTGGGTGGAGCCCTGGACGTCCATCATGTGG +
Preference number: 6 (lower is better)
Translates to: LRWPTRGRAYFSTKS*MAESWVEPWTSIMW
Trigger: CCACATGATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGGTTGGCCACCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652332.1
CDS CAA 90 bp GCGATGACCAGGCCCTTTTGGCCCTTGTACTTCTTGGCCAGGCTGTaGTACACGGGCTCTAGCTGCTTGCAGTGCCCGCACCATGGCGCG +
Preference number: 6 (lower is better)
Translates to: AMTRPFWPLYFLARL*YTGSSCLQCPHHGA
Trigger: CGCGCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCCGTGTACAACAGCCTGGCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 72 bp GCGAACTTCTTCCCACTCTCGTCCAGGATGGCGGCATaGACATCCTCCCCACTCTCGCTGAGCCCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: ANFFPLSSRMAA*TSSPLSLSPRS
Trigger: GGACCTGGGGCTCAGCGAGAGTGGGGAGGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286091.9
ENST00000466592.1
ENST00000652332.1
CDS TCA 72 bp CAACCAGGGGCAGGGCGTACTTCAGCACGAAGTCCTTaGTGGCCGAGTCCTGGGTGGAGCCCTGCTTCAAAG +
Preference number: 6 (lower is better)
Translates to: QPGAGRTSARSP*WPSPGWSPASK
Trigger: CTTTGAAGCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466592.1
CDS GCA 72 bp ACGAAGTCCTTGATGGCCGAGTCCTGGGTGGAGCCCTaGTTCAAAGAGGGAACAGGTGAGGGGGCCCACCAT +
Preference number: 6 (lower is better)
Translates to: TKSLMAESWVEP*FKEGTGEGAHH
Trigger: ATGGTGGGCCCCCTCACCTGTTCCCTCTTTGAAGCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466592.1
CDS CCA 72 bp GCGTACTTCAGCACGAAGTCCTTGATGGCCGAGTCCTaGGTGGAGCCCTGCTGGACGTCCATCATGTGGCTC +
Preference number: 6 (lower is better)
Translates to: AYFSTKSLMAES*VEPCWTSIMWL
Trigger: GAGCCACATGATGGACGTCCAGCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS CAA 72 bp GCGTCGACCTTTGCCAGGGGAATTGGAGGAGAACGCTaGCTGAGCTCCTTGGCGGCCTTCTCATACTCGGGG +
Preference number: 6 (lower is better)
Translates to: ASTFARGIGGER*LSSLAAFSYSG
Trigger: CCCCGAGTATGAGAAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 90 bp TCTGCGGTGGCGTCGACCTTTGCCAGGGGAATTGGAGGAGAACGCTaGCTGAGCTCCTTGGCGGCCTTCTCATACTCGGGGGCAAGTTTC +
Preference number: 6 (lower is better)
Translates to: SAVASTFARGIGGER*LSSLAAFSYSGASF
Trigger: GAAACTTGCCCCCGAGTATGAGAAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS TCA 72 bp CGACCTTTGCCAGGGGAATTGGAGGAGAACGCTTGCTaGGCTCCTTGGCGGCCTTCTCATACTCGGGGGCAA +
Preference number: 6 (lower is better)
Translates to: RPLPGELEENAC*APWRPSHTRGQ
Trigger: TTGCCCCCGAGTATGAGAAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS GCA 72 bp CTTGGCCAGGTCTGTTTCTGCGGTGGCGTCGACCTTTaGCAGGGGAATTGGAGGAGAACGCTTGCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: LGQVCFCGGVDL*QGNWRRTLAEL
Trigger: GAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACCTGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 72 bp TGTTTCTGCGGTGGCGTCGACCTTTGCCAGGGGAATTaGAGGAGAACGCTTGCTGAGCTCCTTGGCGGCCTT +
Preference number: 6 (lower is better)
Translates to: CFCGGVDLCQGN*RRTLAELLGGL
Trigger: AAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 72 bp AGGCCCTTTTGGCCCTTGTACTTCTTGGCCAGGCTGTaGTACACGGGCTCTAGCTGCTTGCAGTGCCCGCAC +
Preference number: 6 (lower is better)
Translates to: RPFWPLYFLARL*YTGSSCLQCPH
Trigger: GTGCGGGCACTGCAAGCAGCTAGAGCCCGTGTACAACAGCCTGGCCAAGAAGTACAAGGGCCAAAAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 90 bp GTGGAGCCCTGCTGGACGTCCATCATGTGGCTCCGGGGCTCATACTaGGACTGGAATTTCTCAGGCTGCATTACAACCAACTGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: VEPCWTSIMWLRGSY*DWNFSGCITTNCPW
Trigger: CCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGTCCAGCAGGGCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS CAA 90 bp TGGGTGGAGCCCTGGACGTCCATCATGTGGCTCCGGGGCTCATACTaGGACTGGAATTTCTCAGGCTGCATTACAACCAACTGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: WVEPWTSIMWLRGSY*DWNFSGCITTNCPW
Trigger: CCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGTCCAGGGCTCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652332.1
CDS TCA 72 bp GCTTGCAGTGCCCGCACCATGGCGCGTAGAACTCGATaGGGACGTCCTTCTTGGGGTCCATCACAATGGAGT +
Preference number: 6 (lower is better)
Translates to: ACSARTMARRTR*GRPSWGPSQWS
Trigger: ACTCCATTGTGATGGACCCCAAGAAGGACGTCCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 72 bp GAGTCCTGGGTGGAGCCCTGCTGGACGTCCATCATGTaGCTCCGGGGCTCATACTTGGACTGGAATTTCTCA +
Preference number: 6 (lower is better)
Translates to: ESWVEPCWTSIM*LRGSYLDWNFS
Trigger: TGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGTCCAGCAGGGCTCCACCCAGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS CCA 72 bp GCGTACTTCAGCACGAAGTCCTTGATGGCCGAGTCCTaGGTGGAGCCCTGCTTCAAAGAGGGAACAGGTGAG +
Preference number: 6 (lower is better)
Translates to: AYFSTKSLMAES*VEPCFKEGTGE
Trigger: CTCACCTGTTCCCTCTTTGAAGCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466592.1
CDS CCA 72 bp CCTTCACCTCCCCAGCATAGTCCTCTTCGTCCGCAATaGCAAAGGTGTACTCAGGGAAGTCCTTGGCCACCT +
Preference number: 6 (lower is better)
Translates to: PSPPQHSPLRPQ*QRCTQGSPWPP
Trigger: AGGTGGCCAAGGACTTCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286091.9
ENST00000466592.1
ENST00000652332.1
CDS CCA 72 bp GACAAACTCGCGGAGGGTGTCAGAGTCAAACTCCTCTaGCTCCATGGCGAACTTCTTCCCACTCTCGTCCAG +
Preference number: 6 (lower is better)
Translates to: DKLAEGVRVKLL*LHGELLPTLVQ
Trigger: CTGGACGAGAGTGGGAAGAAGTTCGCCATGGAGCCAGAGGAGTTTGACTCTGACACCCTCCGCGAGTTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286091.9
ENST00000466592.1
ENST00000652332.1
CDS TCA 72 bp TCACAATGGAGTCAAAGGTCTTTCCCACCACGACCTTaGCGGGTCCCTTGTTGTTCTTGGGCACTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SQWSQRSFPPRP*RVPCCSWALAG
Trigger: CCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 72 bp ACAAGCGTGACTTCTGGTGGAGGCGTCCAGTCGGGCTaGGAGACTTCTCTGACCTTGGCAACAATTTCTTCC +
Preference number: 6 (lower is better)
Translates to: TSVTSGGGVQSG*ETSLTLATISS
Trigger: GGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTCCCAGCCCGACTGGACGCCTCCACCAGAAGTCACGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 72 bp GGAACTCCTGGACCTGCTTCAGGGTCAGAATCTCCTTaGAGGGAGGCCCGGACTGCTCGATCATGTAATCAA +
Preference number: 6 (lower is better)
Translates to: GTPGPASGSESP*REARTARSCNQ
Trigger: TTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGACCCTGAAGCAGGTCCAGGAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 72 bp CGTCCGCAATGGCAAAGGTGTACTCAGGGAAGTCCTTaGCCACCTCTAGGACTTTGCTCCGCCAAAACTGAG +
Preference number: 6 (lower is better)
Translates to: RPQWQRCTQGSP*PPLGLCSAKTE
Trigger: CTCAGTTTTGGCGGAGCAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTACACCTTTGCCATTGCGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286091.9
ENST00000466592.1
ENST00000652332.1
CDS CAA 72 bp AAGGTCTTTCCCACCACGACCTTGACGGGTCCCTTGTaGTTCTTGGGCACTGGCTGGGATTTGATGACTGGC +
Preference number: 6 (lower is better)
Translates to: KVFPTTTLTGPL*FLGTGWDLMTG
Trigger: GCCAGTCATCAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 72 bp AGGGAACAGGTGAGGGGGCCCACCATCTCCCCACCATaGTTCTTGAGTACAATGTTTGAGGGACTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: REQVRGPTISPP*FLSTMFEGLWG
Trigger: CCCCCAAAGTCCCTCAAACATTGTACTCAAGAACAATGGTGGGGAGATGGTGGGCCCCCTCACCTGTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466592.1
CDS CCA 72 bp CAGGTTGTTAGCGGCATCCTGGTATTGCTGGTAGGCTaGGTCACTCTCCCCCTTAAAGACCCCGATGATGAT +
Preference number: 6 (lower is better)
Translates to: QVVSGILVLLVG*VTLPLKDPDDD
Trigger: ATCATCATCGGGGTCTTTAAGGGGGAGAGTGACCCAGCCTACCAGCAATACCAGGATGCCGCTAACAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 72 bp ACGTCCATCATGTGGCTCCGGGGCTCATACTTGGACTaGAATTTCTCAGGCTGCATTACAACCAACTGCCCC +
Preference number: 6 (lower is better)
Translates to: TSIMWLRGSYLD*NFSGCITTNCP
Trigger: GGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 72 bp TTTCCCACCACGACCTTGACGGGTCCCTTGTTGTTCTaGGGCACTGGCTGGGATTTGATGACTGGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: FPTTTLTGPLLF*GTGWDLMTGFS
Trigger: ACTGAAGCCAGTCATCAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 72 bp ATCACAATGGAGTCAAAGGTCTTTCCCACCACGACCTaGACGGGTCCCTTGTTGTTCTTGGGCACTGGCTGG +
Preference number: 6 (lower is better)
Translates to: ITMESKVFPTTT*TGPLLFLGTGW
Trigger: CCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 72 bp CCCTGGACGTCCATCATGTGGCTCCGGGGCTCATACTaGGACTGGAATTTCTCAGGCTGCATTACAACCAAC +
Preference number: 6 (lower is better)
Translates to: PWTSIMWLRGSY*DWNFSGCITTN
Trigger: GTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652332.1
CDS CAA 90 bp TTGGGGTCCATCACAATGGAGTCAAAGGTCTTTCCCACCACGACCTaGACGGGTCCCTTGTTGTTCTTGGGCACTGGCTGGGATTTGATG +
Preference number: 6 (lower is better)
Translates to: LGSITMESKVFPTTT*TGPLLFLGTGWDLM
Trigger: CATCAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTGTGATGGACCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS TCA 72 bp CAACTTCATCAAAGTTCTCTTTGGTCAACACAAGCGTaGCTTCTGGTGGAGGCGTCCAGTCGGGCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: QLHQSSLWSTQA*LLVEASSRAGR
Trigger: TCTCCCAGCCCGACTGGACGCCTCCACCAGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS GCA 72 bp CTCCGGGGCTCATACTTGGACTGGAATTTCTCAGGCTaGATTACAACCAACTGCCCCTGGGAGACTTTCAAG +
Preference number: 6 (lower is better)
Translates to: LRGSYLDWNFSG*ITTNCPWETFK
Trigger: CTTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 72 bp GCTGGACGTCCATCATGTGGCTCCGGGGCTCATACTTaGACTGGAATTTCTCAGGCTGCATTACAACCAACT +
Preference number: 6 (lower is better)
Translates to: AGRPSCGSGAHT*TGISQAALQPT
Trigger: AGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS CCA 72 bp CCTGGACGTCCATCATGTGGCTCCGGGGCTCATACTTaGACTGGAATTTCTCAGGCTGCATTACAACCAACT +
Preference number: 6 (lower is better)
Translates to: PGRPSCGSGAHT*TGISQAALQPT
Trigger: AGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652332.1
CDS CAA 72 bp TGCTGGACGTCCATCATGTGGCTCCGGGGCTCATACTaGGACTGGAATTTCTCAGGCTGCATTACAACCAAC +
Preference number: 6 (lower is better)
Translates to: CWTSIMWLRGSY*DWNFSGCITTN
Trigger: GTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286091.9
CDS CAA 72 bp TCAAAGGTCTTTCCCACCACGACCTTGACGGGTCCCTaGTTGTTCTTGGGCACTGGCTGGGATTTGATGACT +
Preference number: 6 (lower is better)
Translates to: SKVFPTTTLTGP*LFLGTGWDLMT
Trigger: AGTCATCAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 90 bp ACAATGGAGTCAAAGGTCTTTCCCACCACGACCTTGACGGGTCCCTaGTTGTTCTTGGGCACTGGCTGGGATTTGATGACTGGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: TMESKVFPTTTLTGP*LFLGTGWDLMTGFS
Trigger: ACTGAAGCCAGTCATCAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 90 bp ATGGAGTCAAAGGTCTTTCCCACCACGACCTTGACGGGTCCCTTGTaGTTCTTGGGCACTGGCTGGGATTTGATGACTGGCTTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: MESKVFPTTTLTGPL*FLGTGWDLMTGFSF
Trigger: AAAACTGAAGCCAGTCATCAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 72 bp GTAATCTTCTCTCAGGTTGTTAGCGGCATCCTGGTATaGCTGGTAGGCTGGGTCACTCTCCCCCTTAAAGAC +
Preference number: 6 (lower is better)
Translates to: VIFSQVVSGILV*LVGWVTLPLKD
Trigger: GTCTTTAAGGGGGAGAGTGACCCAGCCTACCAGCAATACCAGGATGCCGCTAACAACCTGAGAGAAGATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 90 bp TCAAAGGTCTTTCCCACCACGACCTTGACGGGTCCCTTGTTGTTCTaGGGCACTGGCTGGGATTTGATGACTGGCTTCAGTTTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: SKVFPTTTLTGPLLF*GTGWDLMTGFSFPF
Trigger: AAAAGGAAAACTGAAGCCAGTCATCAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS GCA 72 bp TGTACTCAGGGAAGTCCTTGGCCACCTCTAGGACTTTaGTCCGCCAAAACTGAGTTGCAGCTCTGTAATCAA +
Preference number: 6 (lower is better)
Translates to: CTQGSPWPPLGL*SAKTELQLCNQ
Trigger: TTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286091.9
ENST00000466592.1
ENST00000652332.1
CDS CAA 72 bp CTGCTGGCCAGCACAGACGCTGAGGTTGCATCGATCTaGGCAACAGGAATGGGAGGATCTTTATCCTTTAAT +
Preference number: 6 (lower is better)
Translates to: LLASTDAEVASI*ATGMGGSLSFN
Trigger: ATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGATGCAACCTCAGCGTCTGTGCTGGCCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 72 bp CACCTTCCGCAGACCTCAGGCCTTCAAAGCTCTTCCTaGGTCCTGCTCAGTTTTGTGGCATGTTCTTCTATA +
Preference number: 6 (lower is better)
Translates to: HLPQTSGLQSSS*VLLSFVACSSI
Trigger: TATAGAAGAACATGCCACAAAACTGAGCAGGACCAAGGAAGAGCTTTGAAGGCCTGAGGTCTGCGGAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS GCA 72 bp TTTCTCGTGGGCCGTTGTAGTCATAAGGCCTTCCTTTaGGGAAAATTTTCAGGGTGGGATAGCCAGAGACAT +
Preference number: 6 (lower is better)
Translates to: FLVGRCSHKAFL*GKFSGWDSQRH
Trigger: ATGTCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTATGACTACAACGGCCCACGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 72 bp TGCTGGCCAGCACAGACGCTGAGGTTGCATCGATCTTaGCAACAGGAATGGGAGGATCTTTATCCTTTAATA +
Preference number: 6 (lower is better)
Translates to: CWPAQTLRLHRS*QQEWEDLYPLI
Trigger: TATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGATGCAACCTCAGCGTCTGTGCTGGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 72 bp AGTCATAAGGCCTTCCTTTGCGGAAAATTTTCAGGGTaGGATAGCCAGAGACATCAAACCTCTTGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: SHKAFLCGKFSG*DSQRHQTSWPG
Trigger: ACCTGGCCAAGAGGTTTGATGTCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 90 bp ACCAGAATGATATCTGCATCATTCACAACTTCATCAAAGTTCTCTTaGGTCAACACAAGCGTGACTTCTGGTGGAGGCGTCCAGTCGGGC +
Preference number: 6 (lower is better)
Translates to: TRMISASFTTSSKFS*VNTSVTSGGGVQSG
Trigger: GCCCGACTGGACGCCTCCACCAGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGTTGTGAATGATGCAGATATCATTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS GCA 72 bp TTGGACTGGAATTTCTCAGGCTGCATTACAACCAACTaGCCCTGGGAGACTTTCAAGAACTTTGCTATTTCT +
Preference number: 6 (lower is better)
Translates to: LDWNFSGCITTN*PWETFKNFAIS
Trigger: AGAAATAGCAAAGTTCTTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CCA 72 bp CAGACGCTGAGGTTGCATCGATCTTGGCAACAGGAATaGGAGGATCTTTATCCTTTAATATGTTGGCAATTT +
Preference number: 6 (lower is better)
Translates to: QTLRLHRSWQQE*EDLYPLICWQF
Trigger: AAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGATGCAACCTCAGCGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286091.9
ENST00000652332.1
CDS CAA 72 bp TCTCTGTTAGAAGAATCACATTTTGAAAAGGAATGCTaGCTGTTCCAAAGAACTCGCACTTGTTTCTTCACG +
Preference number: 6 (lower is better)
Translates to: SLLEESHFEKEC*LFQRTRTCFFT
Trigger: CGTGAAGAAACAAGTGCGAGTTCTTTGGAACAGCAAGCATTCCTTTTCAAAATGTGATTCTTCTAACAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413966.1