Pregenerated sensors for PDIA3 (Homo sapiens)
Ensembl gene IDs: ENSG00000167004Ensembl transcript IDs: ENST00000300289.10, ENST00000434494.5, ENST00000497349.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGAATCTCCAGAAATCTGGGGAGCAACCAGGTGTGTGTGTAAGCTaGAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAATAT | + |
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Preference number: 1 (lower is better) Translates to: ENLQKSGEQPGVCVS*KAGTKIHCLKLWQY Trigger: ATATTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGCAGCTTACACACACACCTGGTTGCTCCCCAGATTTCTGGAGATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| 3UTR TCA 90 bp | TTCCTAGGATCACCTAAAGTAGGGCTCCTACCTGGAATTCTCCAGTaGCTGAAAACTATAACTGGGCAGGATTTGAATTTACCTACAAAA | + |
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Preference number: 1 (lower is better) Translates to: FLGSPKVGLLPGILQ*LKTITGQDLNLPTK Trigger: TTTTGTAGGTAAATTCAAATCCTGCCCAGTTATAGTTTTCAGTCACTGGAGAATTCCAGGTAGGAGCCCTACTTTAGGTGATCCTAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR CCA 90 bp | ACTATAACTGGGCAGGATTTGAATTTACCTACAAAAGGAGATAAATaGTTTAGTTGGACAAAAGATCACTCTTCAGTCTTATCCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: TITGQDLNLPTKGDK*FSWTKDHSSVLSFL Trigger: CAGAAAGGATAAGACTGAAGAGTGATCTTTTGTCCAACTAAACCATTTATCTCCTTTTGTAGGTAAATTCAAATCCTGCCCAGTTATAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGCCCTGGCTTTACATCTaGGCCACTTTTGGGGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: FSYADHWSPWWQVESCSRPWLYI*ATFGAL Trigger: GAGAGCCCCAAAAGTGGCTCAGATGTAAAGCCAGGG...CCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR TCA 90 bp | TATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGTTCTTGTTGACAGGGCATTTCTaGGCAGAGAACAGTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: YADHWSPWWQVESCSRFLLTGHF*AENSPW Trigger: CCAAGGACTGTTCTCTGCTCAGAAATGCCCTGTCAA...CAAGAACCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR TCA 90 bp | TGTCCCACATTAAAGGTCTCATCCTGGAGTTTGAGGAAAAGAACAGGGGCAGCTTTGGATGAAACTGCGTaGTGCCACACCCTTGACAGG | + |
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Preference number: 2 (lower is better) Translates to: CPTLKVSSWSLRKRTGAALDETA*CHTLDR Trigger: CCTGTCAAGGGTGTGGCATCACGCAGTTTCATCCAA...AGCTGCCCCTGTTCTTTTCCTCAAACTCCAGGATGAGACCTTTAATGTGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGGATGCTTCACTCATAACTAGGAATGGTACTGCCTTTCCCAGTTCTACTGTGATGCCACACCCTTaGCAGGGCATTTCTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KVDASLITRNGTAFPSSTVMPHP*QGISEQ Trigger: CTGCTCAGAAATGCCCTGTCAAGGGTGTGGCATCAC...AGTAGAACTGGGAAAGGCAGTACCATTCCTAGTTATGAGTGAAGCATCCACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR CCA 90 bp | TATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGTTCTTGATTCCTGAAACAACTTaGATGAAACTGCGTGATGCC | + |
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Preference number: 2 (lower is better) Translates to: YADHWSPWWQVESCSRFLIPETT*MKLRDA Trigger: GGCATCACGCAGTTTCATCCAAGTTGTTTCAGGAAT...CAAGAACCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCACATTAAAGGTCTCATCCTGGAGTTTGAGGAAAAGAACAGGGGCAGCTTCTTATGCTGACCACTaGAGTCCATGGTGGCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: CPTLKVSSWSLRKRTGAASYADH*SPWWQV Trigger: TACTTGCCACCATGGACTCCAGTGGTCAGCATAAGA...AGCTGCCCCTGTTCTTTTCCTCAAACTCCAGGATGAGACCTTTAATGTGGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR TCA 90 bp | TATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGTTCTTGTCCAAGCTTTGTGTGTaGCCAAGATACATACTTTAC | + |
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Preference number: 2 (lower is better) Translates to: YADHWSPWWQVESCSRFLSKLCV*PRYILY Trigger: GTAAAGTATGTATCTTGGTCACACACAAAGCTTGGA...CAAGAACCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGAGTACCTTCACCAGAAATTGTCCCACATTAAAGGTCTCATCCTGGAGTCCTGGAATTCTCCAGTaGCTGAAAACTATAACTGGG | + |
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Preference number: 2 (lower is better) Translates to: AVSTFTRNCPTLKVSSWSPGILQ*LKTITG Trigger: CCCAGTTATAGTTTTCAGTCACTGGAGAATTCCAGG...ACTCCAGGATGAGACCTTTAATGTGGGACAATTTCTGGTGAAGGTACTCACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGGATGCTTCACTCATAACTAGGAATGGTACTGCCTTTCCCAGTTCTACTTGCAGTAAGCTCAGCTaGGTGGCAAGGATAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: KVDASLITRNGTAFPSSTCSKLS*VARINR Trigger: CCTGTTTATCCTTGCCACGCAGCTGAGCTTACTGCA...AGTAGAACTGGGAAAGGCAGTACCATTCCTAGTTATGAGTGAAGCATCCACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR TCA 90 bp | CTCATAACTAGGAATGGTACTGCCTTTCCCAGTTCTACTGAAGGGGAAGTTAAACTGAAACAACTTGGATaGAACTGCGTGATGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: LITRNGTAFPSSTEGEVKLKQLG*NCVMPH Trigger: GTGTGGCATCACGCAGTTTCATCCAAGTTGTTTCAG...TTTAACTTCCCCTTCAGTAGAACTGGGAAAGGCAGTACCATTCCTAGTTATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR TCA 90 bp | TGTCCCACATTAAAGGTCTCATCCTGGAGTTTGAGGAAAAGAACAGGGGCAGCTCCAGCCCAGATGTTATaGGTTACAAGATTATGGTTT | + |
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Preference number: 2 (lower is better) Translates to: CPTLKVSSWSLRKRTGAAPAQML*VTRLWF Trigger: AAACCATAATCTTGTAACTCATAACATCTGGGCTGG...AGCTGCCCCTGTTCTTTTCCTCAAACTCCAGGATGAGACCTTTAATGTGGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR CAA 90 bp | AGTTACAGAGAAGAAAAGCGTCGCTGTGAGTACCTTCACCAGAAATaGTCCCACATTAAAGGTCTCATCCTGGAGTTTGAGGAAAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SYREEKRRCEYLHQK*SHIKGLILEFEEKN Trigger: GTTCTTTTCCTCAAACTCCAGGATGAGACCTTTAATGTGGGACAATTTCTGGTGAAGGTACTCACAGCGACGCTTTTCTTCTCTGTAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGAGTACCTTCACCAGAAATTGTCCCACATTAAAGGTCTCATCCTGGAGTTGTGTAGAGAACATCTaGTTCTCAATCTGGTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: AVSTFTRNCPTLKVSSWSCVENI*FSIWWK Trigger: TTTCCACCAGATTGAGAACCAGATGTTCTCTACACA...ACTCCAGGATGAGACCTTTAATGTGGGACAATTTCTGGTGAAGGTACTCACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGAGTACCTTCACCAGAAATTGTCCCACATTAAAGGTCTCATCCTGGAGTTTAATTTTTAGGGTATaGGCACTGTGCAAAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: AVSTFTRNCPTLKVSSWSLIFRV*ALCKDS Trigger: GGAGTCTTTGCACAGTGCCCATACCCTAAAAATTAA...ACTCCAGGATGAGACCTTTAATGTGGGACAATTTCTGGTGAAGGTACTCACAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR CCA 90 bp | CTGCACCCAGCAGTGTCAGCAATTCCTGAAACAACTTGGATGAAACTGCGTGATATCTGGTTCTCAATCTaGTGGAAAATAAGACAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LHPAVSAIPETTWMKLRDIWFSI*WKIRQF Trigger: AAACTGTCTTATTTTCCACCAGATTGAGAACCAGAT...ATCACGCAGTTTCATCCAAGTTGTTTCAGGAATTGCTGACACTGCTGGGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR CAA 90 bp | GTTGGACAAAAGATCACTCTTCAGTCTTATCCTTTCTGTTCCTCATaGTTACAAAAGAAAGTGGATGCTTCACTCATAACTAGGAATGGT | + |
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Preference number: 2 (lower is better) Translates to: VGQKITLQSYPFCSS*LQKKVDASLITRNG Trigger: ACCATTCCTAGTTATGAGTGAAGCATCCACTTTCTTTTGTAACAATGAGGAACAGAAAGGATAAGACTGAAGAGTGATCTTTTGTCCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR CCA 72 bp | CTGCACCCAGCAGTGTCAGCAATTCCTGAAACAACTTaGATGAAACTGCGTGATGCCACACCCTTGACAGGG | + |
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Preference number: 3 (lower is better) Translates to: LHPAVSAIPETT*MKLRDATPLTG Trigger: CCCTGTCAAGGGTGTGGCATCACGCAGTTTCATCCAAGTTGTTTCAGGAATTGCTGACACTGCTGGGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR GCA 72 bp | CAGAAATCTGGGGAGCAACCAGGTGTGTGTGTAAGCTaGAAGGCTGGGACTAAAATCCACTGCCTTAAACTT | + |
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Preference number: 3 (lower is better) Translates to: QKSGEQPGVCVS*KAGTKIHCLKL Trigger: AAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGCAGCTTACACACACACCTGGTTGCTCCCCAGATTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| 3UTR CCA 72 bp | ACTATCTGCTTTTCTTATGCTGACCACTGGAGTCCATaGTGGCAAGTAGAGAGCTGCTCTAGGTTCTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: TICFSYADHWSP*WQVESCSRFLR Trigger: CCTCAAGAACCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAAGCAGATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR CAA 90 bp | TGTCCCACATTAAAGGTCTCATCCTGGAGTTTGAGGAAAAGAACAGGGGCAGCTAGCAGAGAACAGTCCTaGGGAGATATAAACATGCAG | + |
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Preference number: 3 (lower is better) Translates to: CPTLKVSSWSLRKRTGAASREQS*GDINMQ Trigger: CTGCATGTTTATATCTCCCAAGGACTGTTCTCTGCT...AGCTGCCCCTGTTCTTTTCCTCAAACTCCAGGATGAGACCTTTAATGTGGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR CAA 90 bp | GCTGTGAGTACCTTCACCAGAAATTGTCCCACATTAAAGGTCTCATCCTGGAGTACATCTGAGCCACTTTaGGGGCTCTCTAAACAATTA | + |
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Preference number: 3 (lower is better) Translates to: AVSTFTRNCPTLKVSSWSTSEPL*GLSKQL Trigger: TAATTGTTTAGAGAGCCCCAAAAGTGGCTCAGATGT...ACTCCAGGATGAGACCTTTAATGTGGGACAATTTCTGGTGAAGGTACTCACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR CCA 72 bp | TTCACCAGAAATTGTCCCACATTAAAGGTCTCATCCTaGAGTTTGAGGAAAAGAACAGGGGCAGCTGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: FTRNCPTLKVSS*SLRKRTGAAEV Trigger: AACTTCAGCTGCCCCTGTTCTTTTCCTCAAACTCCAGGATGAGACCTTTAATGTGGGACAATTTCTGGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR-3UTR CAA 90 bp | GCTGTGAGTACCTTCACCAGAAATTGTCCCACATTAAAGGTCTCATCCTGGAGTATAACTGGGCAGGATTaGAATTTACCTACAAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: AVSTFTRNCPTLKVSSWSITGQD*NLPTKG Trigger: TCCTTTTGTAGGTAAATTCAAATCCTGCCCAGTTAT...ACTCCAGGATGAGACCTTTAATGTGGGACAATTTCTGGTGAAGGTACTCACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| 3UTR TCA 72 bp | TCACCTAAAGTAGGGCTCCTACCTGGAATTCTCCAGTaGCTGAAAACTATAACTGGGCAGGATTTGAATTTA | + |
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Preference number: 3 (lower is better) Translates to: SPKVGLLPGILQ*LKTITGQDLNL Trigger: TAAATTCAAATCCTGCCCAGTTATAGTTTTCAGTCACTGGAGAATTCCAGGTAGGAGCCCTACTTTAGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | TATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGTTCTTGCCCTGGCTTTACATCTaGGCCACTTTTGGGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: YADHWSPWWQVESCSRFLPWLYI*ATFGAL Trigger: GAGAGCCCCAAAAGTGGCTCAGATGTAAAGCCAGGG...CAAGAACCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CCA 90 bp | TATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGTTCTTGGACCACTGGAGTCCATaGTGGCAAGTAGAGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YADHWSPWWQVESCSRFLDHWSP*WQVESC Trigger: GCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTC...CAAGAACCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CCA 90 bp | TTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGCACTGGAGTCCATGGTaGCAAGTAGAGAGCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FSYADHWSPWWQVESCSRHWSPW*QVESCS Trigger: AGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTG...CCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | GCTGTGAGTACCTTCACCAGAAATTGTCCCACATTAAAGGTCTCATCCTGGAGTGTGATGCCACACCCTTaGCAGGGCATTTCTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: AVSTFTRNCPTLKVSSWSVMPHP*QGISEQ Trigger: CTGCTCAGAAATGCCCTGTCAAGGGTGTGGCATCAC...ACTCCAGGATGAGACCTTTAATGTGGGACAATTTCTGGTGAAGGTACTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | CTGCACCCAGCAGTGTCAGCAATTCCTGAAACAACTTGGATGAAACTGCGTGATTTGGATGAAACTGCGTaGTGCCACACCCTTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: LHPAVSAIPETTWMKLRDLDETA*CHTLDR Trigger: CCTGTCAAGGGTGTGGCATCACGCAGTTTCATCCAA...ATCACGCAGTTTCATCCAAGTTGTTTCAGGAATTGCTGACACTGCTGGGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR GCA 90 bp | TTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGAGGGTATGGGCACTGTaGAAAGACTCCATAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: FSYADHWSPWWQVESCSRRVWAL*KDSIAV Trigger: CACAGCTATGGAGTCTTTGCACAGTGCCCATACCCT...CCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR GCA 90 bp | AGGGCTCCTACCTGGAATTCTCCAGTGACTGAAAACTATAACTGGGCAGGATTTGAAGCTGGTCCTGCCTaGTTCTTCAAGTGGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: RAPTWNSPVTENYNWAGFEAGPA*FFKWLT Trigger: TGTCAGCCACTTGAAGAAGCAGGCAGGACCAGCTTC...AAATCCTGCCCAGTTATAGTTTTCAGTCACTGGAGAATTCCAGGTAGGAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR GCA 90 bp | TATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGTTCTTGTTAGAGATCCTCCTGTaGCTTCTTCTTCTTCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: YADHWSPWWQVESCSRFLLEILL*LLLLLG Trigger: CCCAAGAAGAAGAAGAAGGCACAGGAGGATCTCTAA...CAAGAACCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR GCA 90 bp | TGTCCCACATTAAAGGTCTCATCCTGGAGTTTGAGGAAAAGAACAGGGGCAGCTTGCAGTAAGCTCAGCTaGGTGGCAAGGATAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: CPTLKVSSWSLRKRTGAACSKLS*VARINR Trigger: CCTGTTTATCCTTGCCACGCAGCTGAGCTTACTGCA...AGCTGCCCCTGTTCTTTTCCTCAAACTCCAGGATGAGACCTTTAATGTGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | TGTCCCACATTAAAGGTCTCATCCTGGAGTTTGAGGAAAAGAACAGGGGCAGCTCTGAAACAACTTGGATaGAACTGCGTGATGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: CPTLKVSSWSLRKRTGAALKQLG*NCVMPH Trigger: GTGTGGCATCACGCAGTTTCATCCAAGTTGTTTCAG...AGCTGCCCCTGTTCTTTTCCTCAAACTCCAGGATGAGACCTTTAATGTGGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR GCA 90 bp | GCAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAATATCCATAAGGTCGAAGCTGGTCCTGCCTaGTTCTTCAAGTGGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: ARLGLKSTALNFGNIHKVEAGPA*FFKWLT Trigger: TGTCAGCCACTTGAAGAAGCAGGCAGGACCAGCTTC...GACCTTATGGATATTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| CDS-3UTR CCA 90 bp | CTGCACCCAGCAGTGTCAGCAATTCCTGAAACAACTTGGATGAAACTGCGTGATAGTAGGGCTCCTACCTaGAATTCTCCAGTGACTGAA | + |
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Preference number: 4 (lower is better) Translates to: LHPAVSAIPETTWMKLRDSRAPT*NSPVTE Trigger: TTCAGTCACTGGAGAATTCCAGGTAGGAGCCCTACT...ATCACGCAGTTTCATCCAAGTTGTTTCAGGAATTGCTGACACTGCTGGGTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | CTGCACCCAGCAGTGTCAGCAATTCCTGAAACAACTTGGATGAAACTGCGTGATTATTTGGGTCTTTGCTaGGCTTCTCGCCAAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LHPAVSAIPETTWMKLRDYLGLC*ASRQVL Trigger: AAGAACTTGGCGAGAAGCTCAGCAAAGACCCAAATA...ATCACGCAGTTTCATCCAAGTTGTTTCAGGAATTGCTGACACTGCTGGGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | CTGCACCCAGCAGTGTCAGCAATTCCTGAAACAACTTGGATGAAACTGCGTGATCCTGGAATTCTCCAGTaGCTGAAAACTATAACTGGG | + |
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Preference number: 4 (lower is better) Translates to: LHPAVSAIPETTWMKLRDPGILQ*LKTITG Trigger: CCCAGTTATAGTTTTCAGTCACTGGAGAATTCCAGG...ATCACGCAGTTTCATCCAAGTTGTTTCAGGAATTGCTGACACTGCTGGGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | CTGCACCCAGCAGTGTCAGCAATTCCTGAAACAACTTGGATGAAACTGCGTGATAGAAAAGCGTCGCTGTaGGTACCTTCACCAGAAATT | + |
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Preference number: 4 (lower is better) Translates to: LHPAVSAIPETTWMKLRDRKASL*VPSPEI Trigger: AATTTCTGGTGAAGGTACTCACAGCGACGCTTTTCT...ATCACGCAGTTTCATCCAAGTTGTTTCAGGAATTGCTGACACTGCTGGGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTAAGCTGCAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAACAAAAAGAGTTTCAATaGGGCTGGAGGAGACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VCVSCKAGTKIHCLKLWQQKEFQ*GWRRLS Trigger: GGAGAGTCTCCTCCAGCCTCATTGAAACTCTTTTTG...TTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGCAGCTTACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTAAGCTGCAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAAGGTGTGTGTGTAAGCTaGAAGGCTGGGACTAAAATC | + |
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Preference number: 4 (lower is better) Translates to: VCVSCKAGTKIHCLKLWQGVCVS*KAGTKI Trigger: GATTTTAGTCCCAGCCTTGCAGCTTACACACACACC...TTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGCAGCTTACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| CDS-3UTR CCA 90 bp | GCTGTGAGTACCTTCACCAGAAATTGTCCCACATTAAAGGTCTCATCCTGGAGTTCTTATGCTGACCACTaGAGTCCATGGTGGCAAGTA | + |
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Preference number: 4 (lower is better) Translates to: AVSTFTRNCPTLKVSSWSSYADH*SPWWQV Trigger: TACTTGCCACCATGGACTCCAGTGGTCAGCATAAGA...ACTCCAGGATGAGACCTTTAATGTGGGACAATTTCTGGTGAAGGTACTCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CCA 90 bp | GCAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAATATCCATAAGGTCCAAATCCAGCAGGAATaGAACAGGGGGCGAAGAACT | + |
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Preference number: 4 (lower is better) Translates to: ARLGLKSTALNFGNIHKVQIQQE*NRGRRT Trigger: AGTTCTTCGCCCCCTGTTCCATTCCTGCTGGATTTG...GACCTTATGGATATTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| CDS-3UTR TCA 90 bp | TTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGTCCAAGCTTTGTGTGTaGCCAAGATACATACTTTAC | + |
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Preference number: 4 (lower is better) Translates to: FSYADHWSPWWQVESCSRSKLCV*PRYILY Trigger: GTAAAGTATGTATCTTGGTCACACACAAAGCTTGGA...CCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | CTCATAACTAGGAATGGTACTGCCTTTCCCAGTTCTACTGAAGGGGAAGTTAAATCTCATCCTGGAGTTTaGGGAAAAGAACAGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LITRNGTAFPSSTEGEVKSHPGV*GKEQGQ Trigger: CTGCCCCTGTTCTTTTCCTCAAACTCCAGGATGAGA...TTTAACTTCCCCTTCAGTAGAACTGGGAAAGGCAGTACCATTCCTAGTTATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTAAGCTGCAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAAAGTGTCCACACTGAATaGGAATCTCCAGAAATCTGG | + |
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Preference number: 4 (lower is better) Translates to: VCVSCKAGTKIHCLKLWQSVHTE*ESPEIW Trigger: CCAGATTTCTGGAGATTCTCATTCAGTGTGGACACT...TTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGCAGCTTACACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| 3UTR CAA 72 bp | GAAGAAAAGCGTCGCTGTGAGTACCTTCACCAGAAATaGTCCCACATTAAAGGTCTCATCCTGGAGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: EEKRRCEYLHQK*SHIKGLILEFE Trigger: CTCAAACTCCAGGATGAGACCTTTAATGTGGGACAATTTCTGGTGAAGGTACTCACAGCGACGCTTTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | GCAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAATATCCATAAGGTCTATTTGGGTCTTTGCTaGGCTTCTCGCCAAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ARLGLKSTALNFGNIHKVYLGLC*ASRQVL Trigger: AAGAACTTGGCGAGAAGCTCAGCAAAGACCCAAATA...GACCTTATGGATATTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| CDS-3UTR GCA 90 bp | GCAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAATATCCATAAGGTCTTAGAGATCCTCCTGTaGCTTCTTCTTCTTCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: ARLGLKSTALNFGNIHKVLEILL*LLLLLG Trigger: CCCAAGAAGAAGAAGAAGGCACAGGAGGATCTCTAA...GACCTTATGGATATTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| CDS-3UTR GCA 90 bp | AGGGCTCCTACCTGGAATTCTCCAGTGACTGAAAACTATAACTGGGCAGGATTTTGGATGCTTTTTCTCTaGAGCAGTACCCAAGTTACA | + |
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Preference number: 4 (lower is better) Translates to: RAPTWNSPVTENYNWAGFWMLFL*SSTQVT Trigger: TGTAACTTGGGTACTGCTGCAGAGAAAAAGCATCCA...AAATCCTGCCCAGTTATAGTTTTCAGTCACTGGAGAATTCCAGGTAGGAGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CCA 90 bp | CTGCACCCAGCAGTGTCAGCAATTCCTGAAACAACTTGGATGAAACTGCGTGATTTAATTTTTAGGGTATaGGCACTGTGCAAAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: LHPAVSAIPETTWMKLRDLIFRV*ALCKDS Trigger: GGAGTCTTTGCACAGTGCCCATACCCTAAAAATTAA...ATCACGCAGTTTCATCCAAGTTGTTTCAGGAATTGCTGACACTGCTGGGTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR GCA 90 bp | CTCATAACTAGGAATGGTACTGCCTTTCCCAGTTCTACTGAAGGGGAAGTTAAATGGCAAGTAGAGAGCTaGTCTAGGTTCTTGAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LITRNGTAFPSSTEGEVKWQVES*SRFLRF Trigger: AAACCTCAAGAACCTAGAGCAGCTCTCTACTTGCCA...TTTAACTTCCCCTTCAGTAGAACTGGGAAAGGCAGTACCATTCCTAGTTATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR GCA 90 bp | CTGCACCCAGCAGTGTCAGCAATTCCTGAAACAACTTGGATGAAACTGCGTGATGAATTTTTGAGCCTCTaGTTAGTGAAACACAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LHPAVSAIPETTWMKLRDEFLSL*LVKHKG Trigger: TCCTTTGTGTTTCACTAAGCAGAGGCTCAAAAATTC...ATCACGCAGTTTCATCCAAGTTGTTTCAGGAATTGCTGACACTGCTGGGTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CCA 90 bp | ATAACTAGGAATGGTACTGCCTTTCCCAGTTCTACTGAAGGGGAAGTTAAAGGGATTCCTGAAACAACTTaGATGAAACTGCGTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: ITRNGTAFPSSTEGEVKGIPETT*MKLRDA Trigger: GGCATCACGCAGTTTCATCCAAGTTGTTTCAGGAAT...CCCTTTAACTTCCCCTTCAGTAGAACTGGGAAAGGCAGTACCATTCCTAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | CTCATAACTAGGAATGGTACTGCCTTTCCCAGTTCTACTGAAGGGGAAGTTAAAAAGAACAGGGGCAGCTaGAGTTATCAAGGGAATTTT | + |
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Preference number: 4 (lower is better) Translates to: LITRNGTAFPSSTEGEVKKNRGS*SYQGNF Trigger: AAAATTCCCTTGATAACTTCAGCTGCCCCTGTTCTT...TTTAACTTCCCCTTCAGTAGAACTGGGAAAGGCAGTACCATTCCTAGTTATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTAAGCTGCAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAAGGGACTAAAATCCACTaGCTTAAACTTTGGCAATAT | + |
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Preference number: 4 (lower is better) Translates to: VCVSCKAGTKIHCLKLWQGTKIH*LKLWQY Trigger: ATATTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCC...TTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGCAGCTTACACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| CDS-3UTR TCA 90 bp | GCAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAATATCCATAAGGTCAAGGACGAAATAAGATaGTACCCTCTCCATTATCAT | + |
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Preference number: 4 (lower is better) Translates to: ARLGLKSTALNFGNIHKVKDEIR*YPLHYH Trigger: ATGATAATGGAGAGGGTATCATCTTATTTCGTCCTT...GACCTTATGGATATTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| CDS-3UTR TCA 90 bp | CCTACAAAAGGAGATAAATGGTTTAGTTGGACAAAAGATCACTCTTCAGTCTTACTGCTTTTCTTATGCTaGCCACTGGAGTCCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: PTKGDKWFSWTKDHSSVLLLFLC*PLESMV Trigger: CACCATGGACTCCAGTGGTCAGCATAAGAAAAGCAG...TAAGACTGAAGAGTGATCTTTTGTCCAACTAAACCATTTATCTCCTTTTGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | CTCATAACTAGGAATGGTACTGCCTTTCCCAGTTCTACTGAAGGGGAAGTTAAAAAGGACGAAATAAGATaGTACCCTCTCCATTATCAT | + |
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Preference number: 4 (lower is better) Translates to: LITRNGTAFPSSTEGEVKKDEIR*YPLHYH Trigger: ATGATAATGGAGAGGGTATCATCTTATTTCGTCCTT...TTTAACTTCCCCTTCAGTAGAACTGGGAAAGGCAGTACCATTCCTAGTTATGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CCA 90 bp | ATAACTAGGAATGGTACTGCCTTTCCCAGTTCTACTGAAGGGGAAGTTAAAGGGATCTGGTTCTCAATCTaGTGGAAAATAAGACAGTTT | + |
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Preference number: 4 (lower is better) Translates to: ITRNGTAFPSSTEGEVKGIWFSI*WKIRQF Trigger: AAACTGTCTTATTTTCCACCAGATTGAGAACCAGAT...CCCTTTAACTTCCCCTTCAGTAGAACTGGGAAAGGCAGTACCATTCCTAGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CCA 90 bp | CTCATAACTAGGAATGGTACTGCCTTTCCCAGTTCTACTGAAGGGGAAGTTAAATTAAAGGTCTCATCCTaGAGTTTGAGGAAAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: LITRNGTAFPSSTEGEVKLKVSS*SLRKRT Trigger: TGTTCTTTTCCTCAAACTCCAGGATGAGACCTTTAA...TTTAACTTCCCCTTCAGTAGAACTGGGAAAGGCAGTACCATTCCTAGTTATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CCA 90 bp | CCTACAAAAGGAGATAAATGGTTTAGTTGGACAAAAGATCACTCTTCAGTCTTATGTGTAGAGAACATCTaGTTCTCAATCTGGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: PTKGDKWFSWTKDHSSVLCVENI*FSIWWK Trigger: TTTCCACCAGATTGAGAACCAGATGTTCTCTACACA...TAAGACTGAAGAGTGATCTTTTGTCCAACTAAACCATTTATCTCCTTTTGTAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR TCA 90 bp | CCTACAAAAGGAGATAAATGGTTTAGTTGGACAAAAGATCACTCTTCAGTCTTATCAAGTCCTGAGAAATaGCATCATCTTCAGGATAAA | + |
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Preference number: 4 (lower is better) Translates to: PTKGDKWFSWTKDHSSVLSSPEK*HHLQDK Trigger: TTTATCCTGAAGATGATGTCATTTCTCAGGACTTGA...TAAGACTGAAGAGTGATCTTTTGTCCAACTAAACCATTTATCTCCTTTTGTAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CAA 90 bp | TATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGTTCTTGACGATATTTGGGTCTTaGCTGAGCTTCTCGCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: YADHWSPWWQVESCSRFLTIFGS*LSFSPS Trigger: ACTTGGCGAGAAGCTCAGCAAAGACCCAAATATCGT...CAAGAACCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CAA 90 bp | TTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGAGCAGAGAACAGTCCTaGGGAGATATAAACATGCAG | + |
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Preference number: 5 (lower is better) Translates to: FSYADHWSPWWQVESCSRSREQS*GDINMQ Trigger: CTGCATGTTTATATCTCCCAAGGACTGTTCTCTGCT...CCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CAA 90 bp | AGGGCTCCTACCTGGAATTCTCCAGTGACTGAAAACTATAACTGGGCAGGATTTGTCTCATCCTGGAGTTaGAGGAAAAGAACAGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: RAPTWNSPVTENYNWAGFVSSWS*RKRTGA Trigger: TGCCCCTGTTCTTTTCCTCAAACTCCAGGATGAGAC...AAATCCTGCCCAGTTATAGTTTTCAGTCACTGGAGAATTCCAGGTAGGAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTAAGCTGCAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAAACGATATTTGGGTCTTaGCTGAGCTTCTCGCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: VCVSCKAGTKIHCLKLWQTIFGS*LSFSPS Trigger: ACTTGGCGAGAAGCTCAGCAAAGACCCAAATATCGT...TTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGCAGCTTACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| CDS-3UTR CAA 90 bp | TTTTCTTATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGACATCTGAGCCACTTTaGGGGCTCTCTAAACAATTA | + |
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Preference number: 5 (lower is better) Translates to: FSYADHWSPWWQVESCSRTSEPL*GLSKQL Trigger: TAATTGTTTAGAGAGCCCCAAAAGTGGCTCAGATGT...CCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CAA 90 bp | TATGCTGACCACTGGAGTCCATGGTGGCAAGTAGAGAGCTGCTCTAGGTTCTTGTTATCAAGGGAATTTTaGAGCCTCTGCTTAGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: YADHWSPWWQVESCSRFLLSREF*SLCLVK Trigger: TTTCACTAAGCAGAGGCTCAAAAATTCCCTTGATAA...CAAGAACCTAGAGCAGCTCTCTACTTGCCACCATGGACTCCAGTGGTCAGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTAAGCTGCAAGGCTGGGACTAAAATCCACTGCCTTAAACTTTGGCAACAGTGCAATCAACCTTaGCTAATGGGACTATTCCTT | + |
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Preference number: 5 (lower is better) Translates to: VCVSCKAGTKIHCLKLWQQCNQP*LMGLFL Trigger: AAGGAATAGTCCCATTAGCAAAGGTTGATTGCACTG...TTGCCAAAGTTTAAGGCAGTGGATTTTAGTCCCAGCCTTGCAGCTTACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434494.5 |
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| CDS-3UTR CAA 90 bp | GCTGTGAGTACCTTCACCAGAAATTGTCCCACATTAAAGGTCTCATCCTGGAGTTACCTTCACCAGAAATaGTCCCACATTAAAGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: AVSTFTRNCPTLKVSSWSYLHQK*SHIKGL Trigger: GAGACCTTTAATGTGGGACAATTTCTGGTGAAGGTA...ACTCCAGGATGAGACCTTTAATGTGGGACAATTTCTGGTGAAGGTACTCACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CAA 90 bp | TGTCCCACATTAAAGGTCTCATCCTGGAGTTTGAGGAAAAGAACAGGGGCAGCTTACTTTTTCCAAGCTTaGTGTGTGACCAAGATACAT | + |
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Preference number: 5 (lower is better) Translates to: CPTLKVSSWSLRKRTGAAYFFQA*CVTKIH Trigger: ATGTATCTTGGTCACACACAAAGCTTGGAAAAAGTA...AGCTGCCCCTGTTCTTTTCCTCAAACTCCAGGATGAGACCTTTAATGTGGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CAA 90 bp | AAAGTGGATGCTTCACTCATAACTAGGAATGGTACTGCCTTTCCCAGTTCTACTCAGTGCAATCAACCTTaGCTAATGGGACTATTCCTT | + |
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Preference number: 5 (lower is better) Translates to: KVDASLITRNGTAFPSSTQCNQP*LMGLFL Trigger: AAGGAATAGTCCCATTAGCAAAGGTTGATTGCACTG...AGTAGAACTGGGAAAGGCAGTACCATTCCTAGTTATGAGTGAAGCATCCACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS-3UTR CAA 90 bp | AGGGCTCCTACCTGGAATTCTCCAGTGACTGAAAACTATAACTGGGCAGGATTTATAACTGGGCAGGATTaGAATTTACCTACAAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: RAPTWNSPVTENYNWAGFITGQD*NLPTKG Trigger: TCCTTTTGTAGGTAAATTCAAATCCTGCCCAGTTAT...AAATCCTGCCCAGTTATAGTTTTCAGTCACTGGAGAATTCCAGGTAGGAGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS GCA 90 bp | GGAAAGAAACATTTATTAATTTCAAGCAGTTATGTGGGCCCATACTaGAGAACTCTTAAGCCAAGAAGGAATCAGTGGTTCTGCCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: GKKHLLISSSYVGPY*RTLKPRRNQWFCLQ Trigger: TTGAAGGCAGAACCACTGATTCCTTCTTGGCTTAAGAGTTCTGCAGTATGGGCCCACATAACTGCTTGAAATTAATAAATGTTTCTTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497349.1 |
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| CDS-3UTR CAA 90 bp | CCTACAAAAGGAGATAAATGGTTTAGTTGGACAAAAGATCACTCTTCAGTCTTACTGCTTCTGTGTCCTTaGTACAAGTTTATATGTTTC | + |
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Preference number: 5 (lower is better) Translates to: PTKGDKWFSWTKDHSSVLLLLCP*YKFICF Trigger: GAAACATATAAACTTGTACAAAGGACACAGAAGCAG...TAAGACTGAAGAGTGATCTTTTGTCCAACTAAACCATTTATCTCCTTTTGTAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300289.10 |
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| CDS GCA 72 bp | CATTTATTAATTTCAAGCAGTTATGTGGGCCCATACTaGAGAACTCTTAAGCCAAGAAGGAATCAGTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: HLLISSSYVGPY*RTLKPRRNQWF Trigger: GAACCACTGATTCCTTCTTGGCTTAAGAGTTCTGCAGTATGGGCCCACATAACTGCTTGAAATTAATAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497349.1 |
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