Pregenerated sensors for PDHX (Homo sapiens)
Ensembl gene IDs: ENSG00000110435Ensembl transcript IDs: ENST00000227868.9, ENST00000430469.6, ENST00000448838.7, ENST00000448838.8, ENST00000526309.1, ENST00000532159.1, ENST00000533262.1, ENST00000533550.5
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTAAAGATGAAGACACCCTaGGTCAAATGCTTTCACCTT | + |
|
Preference number: 2 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLKMKTP*VKCFHL Trigger: AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTT...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000448838.7 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTTATACAGCACCAGAGGTTAAAAATGGATCTGAGTAACCAAATATTCTCTAAGATGAAGACACCCTaGGTCAAATGCTTTCACCTT | + |
|
Preference number: 2 (lower is better) Translates to: PFIQHQRLKMDLSNQIFSKMKTP*VKCFHL Trigger: AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTT...AGAGAATATTTGGTTACTCAGATCCATTTTTAACCTCTGGTGCTGTATAAAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000448838.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTTATACAGCACCAGAGGTTAAAAATGGATCTGAGTAACCAAATATTCTCTGGGGCGAAGGTGCTGTaGGAGTGGCTGTGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFIQHQRLKMDLSNQIFSGAKVL*EWLWGL Trigger: CAGCCCCCACAGCCACTCCCACAGCACCTTCGCCCC...AGAGAATATTTGGTTACTCAGATCCATTTTTAACCTCTGGTGCTGTATAAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGAGGAGGCCGCCATCTTaGCGGCCTTCTCACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRRRPPS*RPSHWL Trigger: CAGCCAGTGAGAAGGCCGTCAAGATGGCGGCCTCCT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CCA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTAAGTGGCTGTGGGGGCTaGAGTTGGTCTGGACTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLSGCGG*SWSGLG Trigger: ACCGAGTCCAGACCAACTCCAGCCCCCACAGCCACT...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTTATACAGCACCAGAGGTTAAAAATGGATCTGAGTAACCAAATATTCTCTCCAGTGGCTGTGCCCTaGCTAGCATCCAGTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PFIQHQRLKMDLSNQIFSPVAVP*LASSEC Trigger: ACACTCACTGGATGCTAGCCAGGGCACAGCCACTGG...AGAGAATATTTGGTTACTCAGATCCATTTTTAACCTCTGGTGCTGTATAAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR TCA 90 bp | CCCTTTATACAGCACCAGAGGTTAAAAATGGATCTGAGTAACCAAATATTCTCTTGGCGGGGATTTCAGTaGATGTGCCCACTGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFIQHQRLKMDLSNQIFSWRGFQ*MCPLHW Trigger: CCAATGCAGTGGGCACATTCACTGAAATCCCCGCCA...AGAGAATATTTGGTTACTCAGATCCATTTTTAACCTCTGGTGCTGTATAAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR TCA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTGCCAAAATGCAGGCCTaGGGAGGGTTAATCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLAKMQA*GGLITA Trigger: TGCAGTGATTAACCCTCCTCAGGCCTGCATTTTGGC...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR GCA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTCCCGAAGCCACTGCGTaGTGTGAAACCATCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLPEATA*CETISN Trigger: ATTGGAGATGGTTTCACAGCACGCAGTGGCTTCGGG...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTGGCGCTGCTGCAGTTTaGCATTTCCCTCTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLGAAAV*HFPLHP Trigger: AGGATGAAGAGGGAAATGCCAAACTGCAGCAGCGCC...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTGGGTTGTCCAGGAGTTaGTACTGGTGGGATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSGLSRS*YWWDHR Trigger: CCTGTGATCCCACCAGTATCAACTCCTGGACAACCC...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGGCCAAAATGCAGGCCTaGGGAGGGTTAATCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRAKMQA*GGLITA Trigger: TGCAGTGATTAACCCTCCTCAGGCCTGCATTTTGGC...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR GCA 90 bp | CCCTTTATACAGCACCAGAGGTTAAAAATGGATCTGAGTAACCAAATATTCTCTATGAGCTGGCGCTGCTaGAGTTTGGCATTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFIQHQRLKMDLSNQIFSMSWRC*SLAFPS Trigger: AGAGGGAAATGCCAAACTGCAGCAGCGCCAGCTCAT...AGAGAATATTTGGTTACTCAGATCCATTTTTAACCTCTGGTGCTGTATAAAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR GCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGATGAGCTGGCGCTGCTaGAGTTTGGCATTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRMSWRC*SLAFPS Trigger: AGAGGGAAATGCCAAACTGCAGCAGCGCCAGCTCAT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR GCA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTAGTTATGAGCTGGCGCTaGTGCAGTTTGGCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLVMSWR*CSLAFP Trigger: GGGAAATGCCAAACTGCAGCAGCGCCAGCTCATAAC...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTATGTGGGGGCTGGAGTTaGTCTGGACTCGGTAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLCGGWS*SGLGNL Trigger: AAGATTACCGAGTCCAGACCAACTCCAGCCCCCACA...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTAAAATGGCAGTTGCTTTaGGCCCTCTCCATCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLKWQLL*ALSIPA Trigger: AGCTGGGATGGAGAGGGCCCAAAGCAACTGCCATTT...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGAAATGGCAGTTGCTTTaGGCCCTCTCCATCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRKWQLL*ALSIPA Trigger: AGCTGGGATGGAGAGGGCCCAAAGCAACTGCCATTT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGGGCGCTGCTGCAGTTTaGCATTTCCCTCTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRGAAAV*HFPLHP Trigger: AGGATGAAGAGGGAAATGCCAAACTGCAGCAGCGCC...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGGTGACTGTTATGAGCTaGCGCTGCTGCAGTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRVTVMS*RCCSLA Trigger: TGCCAAACTGCAGCAGCGCCAGCTCATAACAGTCAC...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR TCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGAGCCACTGCGTGCTGTaGAACCATCTCCAATTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRSHCVL*NHLQLA Trigger: AGCTAATTGGAGATGGTTTCACAGCACGCAGTGGCT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTCCCGAAGCCACTGCGTaGTGTGAAACCATCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSPEATA*CETISN Trigger: ATTGGAGATGGTTTCACAGCACGCAGTGGCTTCGGG...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR GCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGAGTGAATGTGCCCACTaGATTGGGTTGTCCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRSECAH*IGLSRS Trigger: ACTCCTGGACAACCCAATGCAGTGGGCACATTCACT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR GCA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTTCAATAAATGGCAGTTaGTTTGGGCCCTCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLSINGS*FGPSPS Trigger: GGATGGAGAGGGCCCAAAGCAACTGCCATTTATTGA...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTGTTATGAGCTGGCGCTaGTGCAGTTTGGCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSVMSWR*CSLAFP Trigger: GGGAAATGCCAAACTGCAGCAGCGCCAGCTCATAAC...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR TCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTAGCCACTGCGTGCTGTaGAACCATCTCCAATTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSSHCVL*NHLQLA Trigger: AGCTAATTGGAGATGGTTTCACAGCACGCAGTGGCT...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR TCA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTGTATGTGTTCCTTCTTaGCAGGGATGGAAATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLVCVPS*QGWKSV Trigger: CACAGATTTCCATCCCTGTCAAGAAGGAACACATAC...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTTATACAGCACCAGAGGTTAAAAATGGATCTGAGTAACCAAATATTCTCTATGTGCCCACTGCATTaGGTTGTCCAGGAGTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: PFIQHQRLKMDLSNQIFSMCPLH*VVQELI Trigger: TATCAACTCCTGGACAACCCAATGCAGTGGGCACAT...AGAGAATATTTGGTTACTCAGATCCATTTTTAACCTCTGGTGCTGTATAAAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR TCA 90 bp | CCCTTTATACAGCACCAGAGGTTAAAAATGGATCTGAGTAACCAAATATTCTCTTGTTGCCACAGCCACTaGAATGTCAATAAATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFIQHQRLKMDLSNQIFSCCHSH*NVNKWQ Trigger: CTGCCATTTATTGACATTTCAGTGGCTGTGGCAACA...AGAGAATATTTGGTTACTCAGATCCATTTTTAACCTCTGGTGCTGTATAAAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGTGTTGCCACAGCCACTaGAATGTCAATAAATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRCCHSH*NVNKWQ Trigger: CTGCCATTTATTGACATTTCAGTGGCTGTGGCAACA...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR TCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGCCAACTTCTTATCTTTaGGGACTAGGCAAGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRPTSYL*GLGKSD Trigger: ATCCGACTTGCCTAGTCCTCAAAGATAAGAAGTTGG...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTCAATAAATGGCAGTTaGTTTGGGCCCTCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSSINGS*FGPSPS Trigger: GGATGGAGAGGGCCCAAAGCAACTGCCATTTATTGA...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR GCA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTAAGGAGGGTTAATCACTaGAGTAAATTCGTCGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLRRVNH*SKFVDA Trigger: GGCATCGACGAATTTACTGCAGTGATTAACCCTCCT...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR GCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGAGGAGGGTTAATCACTaGAGTAAATTCGTCGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRRRVNH*SKFVDA Trigger: GGCATCGACGAATTTACTGCAGTGATTAACCCTCCT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR GCA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTTTTAAGAAACCTGGTTaGCAGTTCGTCATCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLFKKPG*QFVINH Trigger: GTGGTTGATGACGAACTGGCAACCAGGTTTCTTAAA...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTAGAGTCAGCAATTTCCTaGATACCTTTAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLESAIS*IPLAAA Trigger: TGCTGCTGCTAAAGGTATCCAGGAAATTGCTGACTC...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGCTGGCTAGCATCCAGTaGGTGTTTTTCCAGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRLASIQ*VFFQNI Trigger: AATATTCTGGAAAAACACTCACTGGATGCTAGCCAG...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR GCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGGTTTTTCCAGAATATTaGGGGCAGCTGGACTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRVFPEY*GQLDLN Trigger: GTTTAAGTCCAGCTGCCCGCAATATTCTGGAAAAAC...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR GCA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGTTTAAGAAACCTGGTTaGCAGTTCGTCATCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVTTTESTKLNTNFLSLRFKKPG*QFVINH Trigger: GTGGTTGATGACGAACTGGCAACCAGGTTTCTTAAA...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CCA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTAGAGGACCTACGTCTTTaGGAATTTCAACATGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLEDLRL*EFQHVS Trigger: GGAAACATGTTGAAATTCCCAAAGACGTAGGTCCTC...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTCCCGTTTGTTTCAACTaGACAAGTTTGAGAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSPVCFN*TSLRAS Trigger: GGATGCTCTCAAACTTGTCCAGTTGAAACAAACGGG...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTGAGTCAGCAATTTCCTaGATACCTTTAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSESAIS*IPLAAA Trigger: TGCTGCTGCTAAAGGTATCCAGGAAATTGCTGACTC...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR TCA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTCTGAATCAACTAAGCTaGACACCAACTTCTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLLNQLS*TPTSYL Trigger: AAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAG...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR GCA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTAGTCAGCAGTAGCATATaGATGAGGTACAGTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLVSSSI*MRYSTF Trigger: AAAAGTACTGTACCTCATGCATATGCTACTGCTGAC...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR GCA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTAAGGGTAACAGCTGCTaGCTTGATGATAAAATCATT | + |
|
Preference number: 4 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLKGNSC*LDDKII Trigger: AATGATTTTATCATCAAGGCAGCAGCTGTTACCCTT...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTCTAAAAGATCCTCCTTaGTATTCTTCAGGCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLLKDPP*YSSGNN Trigger: ATTGTTGCCTGAAGAATACCAAGGAGGATCTTTTAG...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTAAGATGAAGACACCCTaGGTCAAATGCTTTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSKMKTP*VKCFHL Trigger: AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTT...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTGCATTTGCACGATTTTaGCCAAGATTCCATCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSAFARF*PRFHHH Trigger: GTGATGATGGAATCTTGGCCAAAATCGTGCAAATGC...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430469.6 |
||
| CDS-3UTR GCA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTATTTAAGGGTAACAGCTaGTGCCTTGATGATAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLFKGNS*CLDDKI Trigger: GATTTTATCATCAAGGCAGCAGCTGTTACCCTTAAA...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTGCTTACATTAACATCTaGCATTTGTTTAAGGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLAYINI*HLFKGN Trigger: GTTACCCTTAAACAAATGCCAGATGTTAATGTAAGC...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTGCTTACATTAACATCTaGCATTTGCACGATTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSAYINI*HLHDFG Trigger: GCCAAAATCGTGCAAATGCCAGATGTTAATGTAAGC...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430469.6 |
||
| CDS-3UTR TCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTCTGAATCAACTAAGCTaGACACCAACTTCTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSLNQLS*TPTSYL Trigger: AAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAG...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTCTAAAAGATCCTCCTTaGTATTCTTCAGGCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSLKDPP*YSSGNN Trigger: ATTGTTGCCTGAAGAATACCAAGGAGGATCTTTTAG...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTCTTTGACCAGATCTTaGCTAACTTTTAAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFLVTTTESTKLNTNFLSSLTRS*LTFKTA Trigger: AGCTGTTTTAAAAGTTAGGCAAGATCTGGTCAAAGA...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS TCA 90 bp | CTGGACTTAAACGGAACCGTAGTGTCCCGGGTATGTGTTCCTTCTTaGCAGGGATGGAAATCTGTGGTTCTGGTGAGGGGCGAGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LDLNGTVVSRVCVPS*QGWKSVVLVRGEAL Trigger: CAGAGCCTCGCCCCTCACCAGAACCACAGATTTCCATCCCTGTCAAGAAGGAACACATACCCGGGACACTACGGTTCCGTTTAAGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000448838.8 ENST00000533262.1 ENST00000533550.5 |
||
| CDS TCA 90 bp | GGGGATTTCAGTGAATGTGCCCACTGCATTGGGTTGTCCAGGAGTTaGTACTGGTGGGATCACAGGCCGGGGATAAGATGGTCCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GDFSECAHCIGLSRS*YWWDHRPGIRWSSC Trigger: ACAGCTGGACCATCTTATCCCCGGCCTGTGATCCCACCAGTATCAACTCCTGGACAACCCAATGCAGTGGGCACATTCACTGAAATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000448838.8 |
||
| CDS TCA 90 bp | AGCTTCAGCACAGGTCGGAACCTCCCAACCGCCAAAATGCAGGCCTaGGGAGGGTTAATCACTGCAGTAAATTCGTCGATGCCAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: SFSTGRNLPTAKMQA*GGLITAVNSSMPNI Trigger: GATGTTTGGCATCGACGAATTTACTGCAGTGATTAACCCTCCTCAGGCCTGCATTTTGGCGGTTGGGAGGTTCCGACCTGTGCTGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 |
||
| CDS GCA 90 bp | ACCACTCGACTGTCACTTGACATTGTGACTGTTATGAGCTGGCGCTaGTGCAGTTTGGCATTTCCCTCTTCATCCTCAGTGAGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TTRLSLDIVTVMSWR*CSLAFPSSSSVSFS Trigger: GCTGAAGCTCACTGAGGATGAAGAGGGAAATGCCAAACTGCAGCAGCGCCAGCTCATAACAGTCACAATGTCAAGTGACAGTCGAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 |
||
| CDS CCA 90 bp | TCATCAACCACTCGACTGTCACTTGACATTGTGACTGTTATGAGCTaGCGCTGCTGCAGTTTGGCATTTCCCTCTTCATCCTCAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTTRLSLDIVTVMS*RCCSLAFPSSSSVS Trigger: GCTCACTGAGGATGAAGAGGGAAATGCCAAACTGCAGCAGCGCCAGCTCATAACAGTCACAATGTCAAGTGACAGTCGAGTGGTTGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 |
||
| CDS TCA 90 bp | AAGAAACCTGGTTGCCAGTTCGTCATCAACCACTCGACTGTCACTTaGCATTGTGACTGTTATGAGCTGGCGCTGCTGCAGTTTGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: KKPGCQFVINHSTVT*HCDCYELALLQFGI Trigger: AATGCCAAACTGCAGCAGCGCCAGCTCATAACAGTCACAATGTCAAGTGACAGTCGAGTGGTTGATGACGAACTGGCAACCAGGTTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 |
||
| CDS GCA 90 bp | GAACCTCCCAACCGCCAAAATGCAGGCCTGAGGAGGGTTAATCACTaGAGTAAATTCGTCGATGCCAAACATCCCCAAGTTGGAAATACT | + |
|
Preference number: 5 (lower is better) Translates to: EPPNRQNAGLRRVNH*SKFVDAKHPQVGNT Trigger: AGTATTTCCAACTTGGGGATGTTTGGCATCGACGAATTTACTGCAGTGATTAACCCTCCTCAGGCCTGCATTTTGGCGGTTGGGAGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 |
||
| CDS GCA 90 bp | CCTTTATCTGTTGCCACAGCCACTGAAATGTCAATAAATGGCAGTTaGTTTGGGCCCTCTCCATCCCAGCTTACATTAACATCTGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: PLSVATATEMSINGS*FGPSPSQLTLTSGI Trigger: AATGCCAGATGTTAATGTAAGCTGGGATGGAGAGGGCCCAAAGCAACTGCCATTTATTGACATTTCAGTGGCTGTGGCAACAGATAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 ENST00000532159.1 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGTGGCGCTGCTGCAGTTaGGCATTTCCCTCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLRWRCCS*AFPSSS Trigger: GGATGAAGAGGGAAATGCCAAACTGCAGCAGCGCCA...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGGAGGCTCTGAAGGTTTaGAAACTGGTGGTGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLREALKV*KLVVED Trigger: GTCCTCCACCACCAGTTTCAAAACCTTCAGAGCCTC...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTGGCGCTGCTGCAGTTaGGCATTTCCCTCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: CFLVTTTESTKLNTNFLSWRCCS*AFPSSS Trigger: GGATGAAGAGGGAAATGCCAAACTGCAGCAGCGCCA...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | CCCTTTATACAGCACCAGAGGTTAAAAATGGATCTGAGTAACCAAATATTCTCTCTGGACTCGGTAATCTaGCCCGTTTGTTTCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PFIQHQRLKMDLSNQIFSLDSVI*PVCFNW Trigger: CCAGTTGAAACAAACGGGCAAGATTACCGAGTCCAG...AGAGAATATTTGGTTACTCAGATCCATTTTTAACCTCTGGTGCTGTATAAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTGGGTTGTCCAGGAGTaGATACTGGTGGGATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CFLVTTTESTKLNTNFLSWVVQE*ILVGSQ Trigger: CTGTGATCCCACCAGTATCAACTCCTGGACAACCCA...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGAATGTGCCCACTGCATaGGGTTGTCCAGGAGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLRNVPTA*GCPGVD Trigger: ATCAACTCCTGGACAACCCAATGCAGTGGGCACATT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTTATACAGCACCAGAGGTTAAAAATGGATCTGAGTAACCAAATATTCTCTGTCAATAAATGGCAGTaGCTTTGGGCCCTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PFIQHQRLKMDLSNQIFSVNKWQ*LWALSI Trigger: GATGGAGAGGGCCCAAAGCAACTGCCATTTATTGAC...AGAGAATATTTGGTTACTCAGATCCATTTTTAACCTCTGGTGCTGTATAAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGGTCAATAAATGGCAGTaGCTTTGGGCCCTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLRVNKWQ*LWALSI Trigger: GATGGAGAGGGCCCAAAGCAACTGCCATTTATTGAC...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTGGAGGACCTACGTCTTaGGGAATTTCAACATGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLGGPTS*GISTCF Trigger: GAAACATGTTGAAATTCCCAAAGACGTAGGTCCTCC...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTGGTATGTGTTCCTTCTaGACAGGGATGGAAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLGMCSF*TGMEIC Trigger: ACAGATTTCCATCCCTGTCAAGAAGGAACACATACC...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGATAACTCTTCGAATATaGCTGGCGGGGATTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLRITLRI*LAGISV Trigger: CACTGAAATCCCCGCCAGCAATATTCGAAGAGTTAT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTAGTAAGCCTTTATCTGTaGCCACAGCCACTGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLVSLYL*PQPLKC Trigger: ACATTTCAGTGGCTGTGGCAACAGATAAAGGCTTAC...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGGTAAGCCTTTATCTGTaGCCACAGCCACTGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLRVSLYL*PQPLKC Trigger: ACATTTCAGTGGCTGTGGCAACAGATAAAGGCTTAC...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTATGTTTTTCCAGAATATaGCGGGCAGCTGGACTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLCFSRI*RAAGLK Trigger: TTTAAGTCCAGCTGCCCGCAATATTCTGGAAAAACA...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGTTCAACTGGACAAGTTaGAGAGCATCCTCTTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLRFNWTS*RASSLV Trigger: CACTAAAGAGGATGCTCTCAAACTTGTCCAGTTGAA...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTATTAACATCTGGCATTaGTTTAAGGGTAACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLINIWH*FKGNSC Trigger: GCAGCTGTTACCCTTAAACAAATGCCAGATGTTAAT...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTCCAAACATCCCCAAGTaGGAAATACTAAAAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLPNIPK*EILKDP Trigger: AGGATCTTTTAGTATTTCCAACTTGGGGATGTTTGG...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTACCAACTTCTTATCTTaGAGGACTAGGCAAGTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: CFLVTTTESTKLNTNFLSTNFLS*RTRQVG Trigger: TCCGACTTGCCTAGTCCTCAAAGATAAGAAGTTGGT...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | AACATTAAACCCAAATTGAAGATGAAGACACCCTGGGTCAAATGCTTTCACCTTTTAATGGCCATCTCTTaGAAGATCACTTCTACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NIKPKLKMKTPWVKCFHLLMAIS*KITSTF Trigger: GAAGGTAGAAGTGATCTTCAAAGAGATGGCCATTAA...AAGGTGAAAGCATTTGACCCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTGGCATTTGCACGATTTaGGCCAAGATTCCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: CFLVTTTESTKLNTNFLSGICTI*AKIPSS Trigger: TGATGATGGAATCTTGGCCAAAATCGTGCAAATGCC...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | GGCCATCTCTTTGAAGATCACTTCTACCTTCAACATAATTATGGTACAGTTCTAAAGGTAACCACAGCTTaGTCAGTCTCAATTTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: GHLFEDHFYLQHNYGTVLKVTTA*SVSISH Trigger: ATGTGAAATTGAGACTGACAAAGCTGTGGTTACCTT...TAGAACTGTACCATAATTATGTTGAAGGTAGAAGTGATCTTCAAAGAGATGGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGAAGGTAACCACAGCTTaGTCAGTCTCAATTTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLRKVTTA*SVSISH Trigger: ATGTGAAATTGAGACTGACAAAGCTGTGGTTACCTT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | CCCTTTATACAGCACCAGAGGTTAAAAATGGATCTGAGTAACCAAATATTCTCTCATCTCTTGCTTTCTTaGATAGAGCCTTTACAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PFIQHQRLKMDLSNQIFSHLLLS*IEPLQS Trigger: ACTCTGTAAAGGCTCTATCAAAGAAAGCAAGAGATG...AGAGAATATTTGGTTACTCAGATCCATTTTTAACCTCTGGTGCTGTATAAAGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGCATCTCTTGCTTTCTTaGATAGAGCCTTTACAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLRHLLLS*IEPLQS Trigger: ACTCTGTAAAGGCTCTATCAAAGAAAGCAAGAGATG...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGACTAAAAGATCCTCCTaGGTATTCTTCAGGCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLRTKRSS*VFFRQQ Trigger: TTGTTGCCTGAAGAATACCAAGGAGGATCTTTTAGT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGATTAACATCTGGCATTaGCACGATTTTGGCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLRINIWH*HDFGQD Trigger: ATCTTGGCCAAAATCGTGCAAATGCCAGATGTTAAT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | TTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTTTGAGGACTTTAATGTCATCTTaGACCAGATCTTGCCTAACT | + |
|
Preference number: 5 (lower is better) Translates to: LVTTTESTKLNTNFLSLRTLMSS*TRSCLT Trigger: AGTTAGGCAAGATCTGGTCAAAGATGACATTAAAGT...CCTCAAAGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTACTAAAAGATCCTCCTaGGTATTCTTCAGGCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: CFLVTTTESTKLNTNFLSTKRSS*VFFRQQ Trigger: TTGTTGCCTGAAGAATACCAAGGAGGATCTTTTAGT...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTCCAAACATCCCCAAGTaGGAAATACTAAAAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CFLVTTTESTKLNTNFLSPNIPK*EILKDP Trigger: AGGATCTTTTAGTATTTCCAACTTGGGGATGTTTGG...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS-3UTR CAA 90 bp | TGTTTCTTGGTAACAACTACTGAATCAACTAAGCTGAACACCAACTTCTTATCTAACATTAAACCCAAATaGAAGATGAAGACACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CFLVTTTESTKLNTNFLSNIKPK*KMKTPW Trigger: CCAGGGTGTCTTCATCTTCAATTTGGGTTTAATGTT...AGATAAGAAGTTGGTGTTCAGCTTAGTTGATTCAGTAGTTGTTACCAAGAAACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000227868.9 |
||
| CDS GCA 72 bp | GCCCCCGGGCTGCCCTCAGCGCCGCCTGATTGCATTTaGGGCCTCGCTGCCGTATCCCAGGCTAAGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: APGLPSAPPDCI*GLAAVSQAKRR Trigger: GCGGCGCTTAGCCTGGGATACGGCAGCGAGGCCGCAAATGCAATCAGGCGGCGCTGAGGGCAGCCCGGGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000448838.8 |
||
| CDS TCA 72 bp | CCGAGGGCCAGTGGCTGTGCCCTGGCTAGCATCCAGTaGGTGTTTTTCCAGAATATTGCGGGCAGCTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: PRASGCALASIQ*VFFQNIAGSWT Trigger: AGTCCAGCTGCCCGCAATATTCTGGAAAAACACTCACTGGATGCTAGCCAGGGCACAGCCACTGGCCCTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000448838.8 ENST00000533262.1 ENST00000533550.5 |
||
| CDS TCA 72 bp | GCACTCACCGCTTCACCCCGAAGCCACTGCGTGCTGTaGAACCATCTCCAATTAGCTCCGCGGCTTACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALTASPRSHCVL*NHLQLAPRLTD Trigger: GTCTGTAAGCCGCGGAGCTAATTGGAGATGGTTTCACAGCACGCAGTGGCTTCGGGGTGAAGCGGTGAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533262.1 |
||
| CDS TCA 72 bp | GGTATTTATCAGGAAGGCAGGCCAGAGAAGGAATCGTaGAGCACCGAAGTGGAGCTGGGGCGAAGACCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GIYQEGRPEKES*STEVELGRRPR Trigger: GCGCGGTCTTCGCCCCAGCTCCACTTCGGTGCTTCACGATTCCTTCTCTGGCCTGCCTTCCTGATAAATACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533550.5 |
||
| CDS CAA 90 bp | GCTGGACTTAAACGGAACCGTAGTGTCCCGGGTATGTGTTCCTTCTaGACAGGGATGGAAATCTGTGGTTCTGGTGAGGGGCGAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AGLKRNRSVPGMCSF*TGMEICGSGEGRGS Trigger: AGAGCCTCGCCCCTCACCAGAACCACAGATTTCCATCCCTGTCAAGAAGGAACACATACCCGGGACACTACGGTTCCGTTTAAGTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000448838.8 ENST00000533262.1 ENST00000533550.5 |
||
| CDS TCA 72 bp | AACGGAACCGTAGTGTCCCGGGTATGTGTTCCTTCTTaGCAGGGATGGAAATCTGTGGTTCTGGTGAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NGTVVSRVCVPS*QGWKSVVLVRG Trigger: GCCCCTCACCAGAACCACAGATTTCCATCCCTGTCAAGAAGGAACACATACCCGGGACACTACGGTTCCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000448838.8 ENST00000533262.1 ENST00000533550.5 |
||
| CDS TCA 72 bp | AGTGAATGTGCCCACTGCATTGGGTTGTCCAGGAGTTaGTACTGGTGGGATCACAGGCCGGGGATAAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SECAHCIGLSRS*YWWDHRPGIRW Trigger: CCATCTTATCCCCGGCCTGTGATCCCACCAGTATCAACTCCTGGACAACCCAATGCAGTGGGCACATTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000448838.8 |
||
| CDS CAA 72 bp | TCTGTGGTTCTGGTGAGGGGCGAGGCTCTGAAGGTTTaGAAACTGGTGGTGGAGGACCTACGTCTTTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SVVLVRGEALKV*KLVVEDLRLWE Trigger: TTCCCAAAGACGTAGGTCCTCCACCACCAGTTTCAAAACCTTCAGAGCCTCGCCCCTCACCAGAACCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000448838.8 ENST00000533262.1 ENST00000533550.5 |
||
| CDS TCA 72 bp | ATCTTAATGGGATCACCCCGAAGCCACTGCGTGCTGTaGAACCATCTCCAATTAGCTCCGCGGCTTACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ILMGSPRSHCVL*NHLQLAPRLTD Trigger: GTCTGTAAGCCGCGGAGCTAATTGGAGATGGTTTCACAGCACGCAGTGGCTTCGGGGTGATCCCATTAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000430469.6 |
||
| CDS TCA 72 bp | ACAGGTCGGAACCTCCCAACCGCCAAAATGCAGGCCTaGGGAGGGTTAATCACTGCAGTAAATTCGTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: TGRNLPTAKMQA*GGLITAVNSSM Trigger: CATCGACGAATTTACTGCAGTGATTAACCCTCCTCAGGCCTGCATTTTGGCGGTTGGGAGGTTCCGACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 |
||
| CDS TCA 72 bp | GGTTGCCAGTTCGTCATCAACCACTCGACTGTCACTTaGCATTGTGACTGTTATGAGCTGGCGCTGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GCQFVINHSTVT*HCDCYELALLQ Trigger: CTGCAGCAGCGCCAGCTCATAACAGTCACAATGTCAAGTGACAGTCGAGTGGTTGATGACGAACTGGCAACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 |
||
| CDS CAA 72 bp | AAACGGAACCGTAGTGTCCCGGGTATGTGTTCCTTCTaGACAGGGATGGAAATCTGTGGTTCTGGTGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KRNRSVPGMCSF*TGMEICGSGEG Trigger: CCCCTCACCAGAACCACAGATTTCCATCCCTGTCAAGAAGGAACACATACCCGGGACACTACGGTTCCGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000448838.8 ENST00000533262.1 ENST00000533550.5 |
||
| CDS CAA 72 bp | GCTGTGGGGGCTGGAGTTGGTCTGGACTCGGTAATCTaGCCCGTTTGTTTCAACTGGACAAGTTTGAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AVGAGVGLDSVI*PVCFNWTSLRA Trigger: TGCTCTCAAACTTGTCCAGTTGAAACAAACGGGCAAGATTACCGAGTCCAGACCAACTCCAGCCCCCACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000448838.8 |
||
| CDS CAA 90 bp | GTGGGAGTGGCTGTGGGGGCTGGAGTTGGTCTGGACTCGGTAATCTaGCCCGTTTGTTTCAACTGGACAAGTTTGAGAGCATCCTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: VGVAVGAGVGLDSVI*PVCFNWTSLRASSL Trigger: TAAAGAGGATGCTCTCAAACTTGTCCAGTTGAAACAAACGGGCAAGATTACCGAGTCCAGACCAACTCCAGCCCCCACAGCCACTCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000448838.8 |
||
| CDS CAA 90 bp | CTGTCACTTGACATTGTGACTGTTATGAGCTGGCGCTGCTGCAGTTaGGCATTTCCCTCTTCATCCTCAGTGAGCTTCAGCACAGGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LSLDIVTVMSWRCCS*AFPSSSSVSFSTGR Trigger: CCGACCTGTGCTGAAGCTCACTGAGGATGAAGAGGGAAATGCCAAACTGCAGCAGCGCCAGCTCATAACAGTCACAATGTCAAGTGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 |
||
| CDS CAA 72 bp | CCCTGGCTAGCATCCAGTGAGTGTTTTTCCAGAATATaGCGGGCAGCTGGACTTAAACGGAACCGTAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PWLASSECFSRI*RAAGLKRNRSV Trigger: GACACTACGGTTCCGTTTAAGTCCAGCTGCCCGCAATATTCTGGAAAAACACTCACTGGATGCTAGCCAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000448838.8 ENST00000533262.1 ENST00000533550.5 |
||
| CDS CAA 90 bp | GGATGGAAATCTGTGGTTCTGGTGAGGGGCGAGGCTCTGAAGGTTTaGAAACTGGTGGTGGAGGACCTACGTCTTTGGGAATTTCAACAT | + |
|
Preference number: 6 (lower is better) Translates to: GWKSVVLVRGEALKV*KLVVEDLRLWEFQH Trigger: ATGTTGAAATTCCCAAAGACGTAGGTCCTCCACCACCAGTTTCAAAACCTTCAGAGCCTCGCCCCTCACCAGAACCACAGATTTCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000448838.8 ENST00000533262.1 ENST00000533550.5 |
||
| CDS GCA 72 bp | CTGTCACTTGACATTGTGACTGTTATGAGCTGGCGCTaGTGCAGTTTGGCATTTCCCTCTTCATCCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSLDIVTVMSWR*CSLAFPSSSSV Trigger: CACTGAGGATGAAGAGGGAAATGCCAAACTGCAGCAGCGCCAGCTCATAACAGTCACAATGTCAAGTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 |
||
| CDS CCA 72 bp | ACTCGACTGTCACTTGACATTGTGACTGTTATGAGCTaGCGCTGCTGCAGTTTGGCATTTCCCTCTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TRLSLDIVTVMS*RCCSLAFPSSS Trigger: GGATGAAGAGGGAAATGCCAAACTGCAGCAGCGCCAGCTCATAACAGTCACAATGTCAAGTGACAGTCGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 |
||
| CDS GCA 72 bp | AACCGCCAAAATGCAGGCCTGAGGAGGGTTAATCACTaGAGTAAATTCGTCGATGCCAAACATCCCCAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: NRQNAGLRRVNH*SKFVDAKHPQV Trigger: AACTTGGGGATGTTTGGCATCGACGAATTTACTGCAGTGATTAACCCTCCTCAGGCCTGCATTTTGGCGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000526309.1 |
||
| CDS CAA 90 bp | TTGGCCAAGATTCCATCATCACTTGCATCTAAGGTAACCACAGCTTaGTCAGTCTCAATTTCACATAATGCATCTCCAGCACTCACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LAKIPSSLASKVTTA*SVSISHNASPALTA Trigger: AGCGGTGAGTGCTGGAGATGCATTATGTGAAATTGAGACTGACAAAGCTGTGGTTACCTTAGATGCAAGTGATGATGGAATCTTGGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000533262.1 ENST00000533550.5 |
||
| CDS CAA 72 bp | GATTCAGTTAATCTCTTGGCAATAACTCTTCGAATATaGCTGGCGGGGATTTCAGTGAATGTGCCCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DSVNLLAITLRI*LAGISVNVPTA Trigger: TGCAGTGGGCACATTCACTGAAATCCCCGCCAGCAATATTCGAAGAGTTATTGCCAAGAGATTAACTGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000448838.8 |
||
| CDS CAA 90 bp | GTACTTTTAGATTCAGTTAATCTCTTGGCAATAACTCTTCGAATATaGCTGGCGGGGATTTCAGTGAATGTGCCCACTGCATTGGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VLLDSVNLLAITLRI*LAGISVNVPTALGC Trigger: ACAACCCAATGCAGTGGGCACATTCACTGAAATCCCCGCCAGCAATATTCGAAGAGTTATTGCCAAGAGATTAACTGAATCTAAAAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000227868.9 ENST00000448838.8 |
||
| CDS CAA 72 bp | ATTCCATCATCACTTGCATCTAAGGTAACCACAGCTTaGTCAGTCTCAATTTCACATAATGCATCTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: IPSSLASKVTTA*SVSISHNASPA Trigger: TGCTGGAGATGCATTATGTGAAATTGAGACTGACAAAGCTGTGGTTACCTTAGATGCAAGTGATGATGGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000227868.9 ENST00000430469.6 ENST00000448838.8 ENST00000533262.1 ENST00000533550.5 |
||