RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDHB (Homo sapiens)

Ensembl gene IDs: ENSG00000168291

Ensembl transcript IDs: ENST00000302746.11, ENST00000383714.8, ENST00000461692.5, ENST00000469364.5, ENST00000469827.1, ENST00000474765.1, ENST00000479945.1, ENST00000480626.5, ENST00000482894.5, ENST00000485460.5

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATAGCACTGCTGCAGCTTCTAAGCAGTGGCCCACAGGTCTTGAATaGGAAACCACAGTTATATGTGTTCCTGAAAACAGAGTGGTCACA +
Preference number: 1 (lower is better)
Translates to: DSTAAASKQWPTGLE*ETTVICVPENRVVT
Trigger: TGTGACCACTCTGTTTTCAGGAACACATATAACTGTGGTTTCCCATTCAAGACCTGTGGGCCACTGCTTAGAAGCTGCAGCAGTGCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR CCA 90 bp ACCTTCCATGATCCTGGCACAGATTTCAGCTCCTACTCCAAACTGTaGCCAGCCTCCTTCCACAGTTACAAGATGATTTGTCTTCATGAC +
Preference number: 1 (lower is better)
Translates to: TFHDPGTDFSSYSKL*PASFHSYKMICLHD
Trigger: GTCATGAAGACAAATCATCTTGTAACTGTGGAAGGAGGCTGGCCACAGTTTGGAGTAGGAGCTGAAATCTGTGCCAGGATCATGGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR TCA 90 bp GCTCCTACTCCAAACTGTGGCCAGCCTCCTTCCACAGTTACAAGATaGTTTGTCTTCATGACACTGGCTTCTATGGTTTCCATGTCCATT +
Preference number: 1 (lower is better)
Translates to: APTPNCGQPPSTVTR*FVFMTLASMVSMSI
Trigger: AATGGACATGGAAACCATAGAAGCCAGTGTCATGAAGACAAATCATCTTGTAACTGTGGAAGGAGGCTGGCCACAGTTTGGAGTAGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR CCA 90 bp CATTCAACTCCTTCTTTAGATAGCACTGCTGCAGCTTCTAAGCAGTaGCCCACAGGTCTTGAATGGGAAACCACAGTTATATGTGTTCCT +
Preference number: 1 (lower is better)
Translates to: HSTPSLDSTAAASKQ*PTGLEWETTVICVP
Trigger: AGGAACACATATAACTGTGGTTTCCCATTCAAGACCTGTGGGCCACTGCTTAGAAGCTGCAGCAGTGCTATCTAAAGAAGGAGTTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR TCA 90 bp CTGTACAAAAATACCTGCTGTTGCTTTAGAAATCGTTTTCCGTTATaGATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCA +
Preference number: 1 (lower is better)
Translates to: LYKNTCCCFRNRFPL*IVRSCSTNPGAVPA
Trigger: TGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAACGATTTCTAAAGCAACAGCAGGTATTTTTGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR CCA 90 bp GTCTTGAATGGGAAACCACAGTTATATGTGTTCCTGAAAACAGAGTaGTCACAGATCAGAGATCAGGTTGAAACTGAAGATGCTACACCA +
Preference number: 1 (lower is better)
Translates to: VLNGKPQLYVFLKTE*SQIRDQVETEDATP
Trigger: TGGTGTAGCATCTTCAGTTTCAACCTGATCTCTGATCTGTGACCACTCTGTTTTCAGGAACACATATAACTGTGGTTTCCCATTCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR CCA 90 bp ATGATTTGTCTTCATGACACTGGCTTCTATGGTTTCCATGTCCATTaGTCTAATGGTACGCATATTTATCACCTCACATTCAACTCCTTC +
Preference number: 1 (lower is better)
Translates to: MICLHDTGFYGFHVH*SNGTHIYHLTFNSF
Trigger: GAAGGAGTTGAATGTGAGGTGATAAATATGCGTACCATTAGACCAATGGACATGGAAACCATAGAAGCCAGTGTCATGAAGACAAATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR-3UTR GCA 90 bp GAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTGATGCTACACCACTGTaGCGCCAGCTGTGGCTCTTG +
Preference number: 2 (lower is better)
Translates to: EAWHLGEESGEFSIHKHIDATPL*RQLWLL
Trigger: CAAGAGCCACAGCTGGCGGCACAGTGGTGTAGCATC...AATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR-3UTR TCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGGATGATTTGTCTTCATaGCACTGGCTTCTATGGTTT +
Preference number: 2 (lower is better)
Translates to: GNRNRQKEAWHLGEESGEDDLSS*HWLLWF
Trigger: AAACCATAGAAGCCAGTGTCATGAAGACAAATCATC...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR-3UTR TCA 90 bp CATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAAATCGTTTTCCGTTATaGATAGTCAGGTCTTGCAGT +
Preference number: 2 (lower is better)
Translates to: HGNRNRQKEAWHLGEESGNRFPL*IVRSCS
Trigger: ACTGCAAGACCTGACTATTCATAACGGAAAACGATT...TCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR GCA 90 bp AACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTCAAATCCAGGTGCAGTaGCAGCAAGTATTTCAAATA +
Preference number: 2 (lower is better)
Translates to: NRNRQKEAWHLGEESGEFQIQVQ*QQVFQI
Trigger: TATTTGAAATACTTGCTGGCACTGCACCTGGATTTG...AAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR GCA 90 bp CATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGACTGTACAAAAATACCTaGTGTTGCTTTAGAAATCGT +
Preference number: 2 (lower is better)
Translates to: HGNRNRQKEAWHLGEESGLYKNT*CCFRNR
Trigger: ACGATTTCTAAAGCAACAGCAGGTATTTTTGTACAG...TCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR TCA 90 bp TTCAAAGAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGAATCGTTTTCCGTTATaGATAGTCAGGTCTTGCAGT +
Preference number: 2 (lower is better)
Translates to: FKEHGNRNRQKEAWHLGENRFPL*IVRSCS
Trigger: ACTGCAAGACCTGACTATTCATAACGGAAAACGATT...CTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTCTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR GCA 90 bp GTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATCAAATCCAGGTGCAGTaGCAGCAAGTATTTCAAATA +
Preference number: 2 (lower is better)
Translates to: VMNSQVLQYKSRCSASKYQIQVQ*QQVFQI
Trigger: TATTTGAAATACTTGCTGGCACTGCACCTGGATTTG...ATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR GCA 90 bp AACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTCTGTACAAAAATACCTaGTGTTGCTTTAGAAATCGT +
Preference number: 2 (lower is better)
Translates to: NRNRQKEAWHLGEESGEFLYKNT*CCFRNR
Trigger: ACGATTTCTAAAGCAACAGCAGGTATTTTTGTACAG...AAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR GCA 90 bp AGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAGTACAAATCCAGGTaGAGTGCCAGCAAGTATTTC +
Preference number: 2 (lower is better)
Translates to: RSCSTNPGAVPASISNKFQYKSR*SASKYF
Trigger: GAAATACTTGCTGGCACTGCACCTGGATTTGTACTG...AAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR CCA 90 bp ATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCAGACAAAAGGAAGCATaGCATCTAGGGGAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: IQVQCQQVFQINFNDLIFRQKEA*HLGEES
Trigger: ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCT...GAATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR TCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATAATCGTTTTCCGTTATaGATAGTCAGGTCTTGCAGT +
Preference number: 2 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINNRFPL*IVRSCS
Trigger: ACTGCAAGACCTGACTATTCATAACGGAAAACGATT...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR TCA 90 bp GCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACACTTTGTCCTTGTGGTaGGAGAGGATAAAATGTTAT +
Preference number: 2 (lower is better)
Translates to: AVQIQVQCQQVFQINFNDTLSLW*ERIKCY
Trigger: ATAACATTTTATCCTCTCTCACCACAAGGACAAAGT...GTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR GCA 90 bp AGTTACAAGATGATTTGTCTTCATGACACTGGCTTCTATGGTTTCCATGTCCATCAAATCCAGGTGCAGTaGCAGCAAGTATTTCAAATA +
Preference number: 2 (lower is better)
Translates to: SYKMICLHDTGFYGFHVHQIQVQ*QQVFQI
Trigger: TATTTGAAATACTTGCTGGCACTGCACCTGGATTTG...ATGGACATGGAAACCATAGAAGCCAGTGTCATGAAGACAAATCATCTTGTAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR-3UTR TCA 90 bp ATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCTCCACAGTTACAAGATaGTTTGTCTTCATGACACTG +
Preference number: 2 (lower is better)
Translates to: IQVQCQQVFQINFNDLIFSTVTR*FVFMTL
Trigger: CAGTGTCATGAAGACAAATCATCTTGTAACTGTGGA...GAATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR-3UTR GCA 90 bp ATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCCAAATCCAGGTGCAGTaGCAGCAAGTATTTCAAATA +
Preference number: 2 (lower is better)
Translates to: IQVQCQQVFQINFNDLIFQIQVQ*QQVFQI
Trigger: TATTTGAAATACTTGCTGGCACTGCACCTGGATTTG...GAATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR CCA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTTTCCTGAAAACAGAGTaGTCACAGATCAGAGATCAG +
Preference number: 2 (lower is better)
Translates to: NPGAVPASISNKFQRLDIFLKTE*SQIRDQ
Trigger: CTGATCTCTGATCTGTGACCACTCTGTTTTCAGGAA...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR-3UTR TCA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTAATCGTTTTCCGTTATaGATAGTCAGGTCTTGCAGT +
Preference number: 2 (lower is better)
Translates to: NPGAVPASISNKFQRLDINRFPL*IVRSCS
Trigger: ACTGCAAGACCTGACTATTCATAACGGAAAACGATT...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR GCA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATCTGTACAAAAATACCTaGTGTTGCTTTAGAAATCGT +
Preference number: 2 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNLYKNT*CCFRNR
Trigger: ACGATTTCTAAAGCAACAGCAGGTATTTTTGTACAG...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR CAA 90 bp GTCTTCATGACACTGGCTTCTATGGTTTCCATGTCCATTGGTCTAATGGTACGCAGTGGCCCACAGGTCTaGAATGGGAAACCACAGTTA +
Preference number: 3 (lower is better)
Translates to: VFMTLASMVSMSIGLMVRSGPQV*NGKPQL
Trigger: TAACTGTGGTTTCCCATTCAAGACCTGTGGGCCACT...GCGTACCATTAGACCAATGGACATGGAAACCATAGAAGCCAGTGTCATGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR TCA 72 bp CCAAACTGTGGCCAGCCTCCTTCCACAGTTACAAGATaGTTTGTCTTCATGACACTGGCTTCTATGGTTTCC +
Preference number: 3 (lower is better)
Translates to: PNCGQPPSTVTR*FVFMTLASMVS
Trigger: GGAAACCATAGAAGCCAGTGTCATGAAGACAAATCATCTTGTAACTGTGGAAGGAGGCTGGCCACAGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR CCA 72 bp CCTTCTTTAGATAGCACTGCTGCAGCTTCTAAGCAGTaGCCCACAGGTCTTGAATGGGAAACCACAGTTATA +
Preference number: 3 (lower is better)
Translates to: PSLDSTAAASKQ*PTGLEWETTVI
Trigger: TATAACTGTGGTTTCCCATTCAAGACCTGTGGGCCACTGCTTAGAAGCTGCAGCAGTGCTATCTAAAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR-3UTR CAA 90 bp AGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCCTGTAATGAATAGTCAGGTCTaGCAGTACAAATCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: RGGEWRVFHTQTHLNFPVMNSQV*QYKSRC
Trigger: GCACCTGGATTTGTACTGCAAGACCTGACTATTCAT...TACAGGGAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR CAA 90 bp GCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACATGAATAGTCAGGTCTaGCAGTACAAATCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: AVQIQVQCQQVFQINFNDMNSQV*QYKSRC
Trigger: GCACCTGGATTTGTACTGCAAGACCTGACTATTCAT...GTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR CAA 90 bp AGGACTCTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTAAGATCAGAGATCAGGTaGAAACTGAAGATGCTACAC +
Preference number: 3 (lower is better)
Translates to: RTLPHPYFVLVVREDKMLRSEIR*KLKMLH
Trigger: GTGTAGCATCTTCAGTTTCAACCTGATCTCTGATCT...TAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAGAGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR CCA 72 bp CTTCATGACACTGGCTTCTATGGTTTCCATGTCCATTaGTCTAATGGTACGCATATTTATCACCTCACATTC +
Preference number: 3 (lower is better)
Translates to: LHDTGFYGFHVH*SNGTHIYHLTF
Trigger: GAATGTGAGGTGATAAATATGCGTACCATTAGACCAATGGACATGGAAACCATAGAAGCCAGTGTCATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
3UTR-3UTR CAA 90 bp AGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTATGAATAGTCAGGTCTaGCAGTACAAATCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: RSCSTNPGAVPASISNKFMNSQV*QYKSRC
Trigger: GCACCTGGATTTGTACTGCAAGACCTGACTATTCAT...AAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR-3UTR CAA 90 bp ATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCATGAATAGTCAGGTCTaGCAGTACAAATCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: IQVQCQQVFQINFNDLIFMNSQV*QYKSRC
Trigger: GCACCTGGATTTGTACTGCAAGACCTGACTATTCAT...GAATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR TCA 72 bp AATACCTGCTGTTGCTTTAGAAATCGTTTTCCGTTATaGATAGTCAGGTCTTGCAGTACAAATCCAGGTGCA +
Preference number: 3 (lower is better)
Translates to: NTCCCFRNRFPL*IVRSCSTNPGA
Trigger: TGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAACGATTTCTAAAGCAACAGCAGGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
3UTR TCA 72 bp ATACATATAAGTTATCTTGTTTGGATACATCTTTCATaGGGACTCTGCCACATCCATACTTTGTCCTTGTGG +
Preference number: 3 (lower is better)
Translates to: IHISYLVWIHLS*GLCHIHTLSLW
Trigger: CCACAAGGACAAAGTATGGATGTGGCAGAGTCCTCATGAAAGATGTATCCAAACAAGATAACTTATATGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGGCAGCTACACCTGCTaGGGCACCATTGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HGNRNRQKEAWHLGEESGGSYTC*GTIGPS
Trigger: AGAGGGCCCAATGGTGCCTCAGCAGGTGTAGCTGCC...TCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
CDS-3UTR TCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGGGCAGCAAAGCACTGTaGGTGCTGGGCAGCTACACC +
Preference number: 4 (lower is better)
Translates to: GNRNRQKEAWHLGEESGEGSKAL*VLGSYT
Trigger: GGTGTAGCTGCCCAGCACTCACAGTGCTTTGCTGCC...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TTCAAAGAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGCCGGCGCGGTCCAGTaGAAGCGCCTCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FKEHGNRNRQKEAWHLGEAGAVQ*KRLFSS
Trigger: GCTGCTGAAGAGGCGCTTTCACTGGACCGCGCCGGC...CTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTCTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302746.11
ENST00000469364.5
ENST00000485460.5
CDS-3UTR TCA 90 bp GAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTGCCGGCGCGGTCCAGTaGAAGCGCCTCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EAWHLGEESGEFSIHKHIAGAVQ*KRLFSS
Trigger: GCTGCTGAAGAGGCGCTTTCACTGGACCGCGCCGGC...AATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302746.11
ENST00000469364.5
ENST00000485460.5
CDS-3UTR GCA 90 bp AGCTCCTACTCCAAACTGTGGCCAGCCTCCTTCCACAGTTACAAGATGATTTGTTCACGAACTGTCACCTaGAGCGCAGCCGGCGCGGTC +
Preference number: 4 (lower is better)
Translates to: SSYSKLWPASFHSYKMICSRTVT*SAAGAV
Trigger: GACCGCGCCGGCTGCGCTGCAGGTGACAGTTCGTGA...ACAAATCATCTTGTAACTGTGGAAGGAGGCTGGCCACAGTTTGGAGTAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR GCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGGATGCTACACCACTGTaGCGCCAGCTGTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GNRNRQKEAWHLGEESGEDATPL*RQLWLL
Trigger: CAAGAGCCACAGCTGGCGGCACAGTGGTGTAGCATC...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGCTGAATTCCAGGGACTaGCCACCTTTAAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GNRNRQKEAWHLGEESGELNSRD*PPLSLG
Trigger: GCCCAGGCTTAAAGGTGGTCAGTCCCTGGAATTCAG...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGGCAAAGCACTGTGAGTaGTGGGCAGCTACACCTGCT +
Preference number: 4 (lower is better)
Translates to: GNRNRQKEAWHLGEESGEAKHCE*WAATPA
Trigger: AGCAGGTGTAGCTGCCCAGCACTCACAGTGCTTTGC...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
CDS-3UTR CCA 90 bp GCAGGACCTTCCATGATCCTGGCACAGATTTCAGCTCCTACTCCAAACTGTGGCGCAGCTTCTAAGCAGTaGCCCACAGGTCTTGAATGG +
Preference number: 4 (lower is better)
Translates to: AGPSMILAQISAPTPNCGAASKQ*PTGLEW
Trigger: CCATTCAAGACCTGTGGGCCACTGCTTAGAAGCTGC...GCCACAGTTTGGAGTAGGAGCTGAAATCTGTGCCAGGATCATGGAAGGTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp GAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTGGCAGCAAAGCACTGTaGGTGCTGGGCAGCTACACC +
Preference number: 4 (lower is better)
Translates to: EAWHLGEESGEFSIHKHIGSKAL*VLGSYT
Trigger: GGTGTAGCTGCCCAGCACTCACAGTGCTTTGCTGCC...AATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AACGCAGGACCTTCCATGATCCTGGCACAGATTTCAGCTCCTACTCCAAACTGTCTGAATTCCAGGGACTaGCCACCTTTAAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NAGPSMILAQISAPTPNCLNSRD*PPLSLG
Trigger: GCCCAGGCTTAAAGGTGGTCAGTCCCTGGAATTCAG...ACAGTTTGGAGTAGGAGCTGAAATCTGTGCCAGGATCATGGAAGGTCCTGCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGGTGGCCCACAGGTCTTaGATGGGAAACCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: GNRNRQKEAWHLGEESGEVAHRS*MGNHSY
Trigger: ATAACTGTGGTTTCCCATTCAAGACCTGTGGGCCAC...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AATCTTTGCATAAGGCATAGGGACATCAGCACCAGTGACACGAACAGCAGGAGCGGACATCAGCACCAGTaGCACGAACAGCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: NLCIRHRDISTSDTNSRSGHQHQ*HEQQEH
Trigger: ATGCTCCTGCTGTTCGTGTCACTGGTGCTGATGTCC...GCTCCTGCTGTTCGTGTCACTGGTGCTGATGTCCCTATGCCTTATGCAAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGACATCAGCACCAGTaGCACGAACAGCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESGHQHQ*HEQQEH
Trigger: ATGCTCCTGCTGTTCGTGTCACTGGTGCTGATGTCC...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp GCACCAGTGACACGAACAGCAGGAGCATCCAGGAAATTGAACGCAGGACCTTCCTCGACTAACCTTGTATaGCCCATCATACTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: APVTRTAGASRKLNAGPSSTNLV*PIILGN
Trigger: GTTGCCCAGTATGATGGGGCATACAAGGTTAGTCGA...GGAAGGTCCTGCGTTCAATTTCCTGGATGCTCCTGCTGTTCGTGTCACTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR GCA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGCAAAGCACTGTGAGTaGTGGGCAGCTACACCAGAC +
Preference number: 4 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESAKHCE*WAATPD
Trigger: GTCTGGTGTAGCTGCCCAGCACTCACAGTGCTTTGC...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485460.5
CDS-3UTR CCA 90 bp CATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGCAGCTTCTAAGCAGTaGCCCACAGGTCTTGAATGG +
Preference number: 4 (lower is better)
Translates to: HGNRNRQKEAWHLGEESGAASKQ*PTGLEW
Trigger: CCATTCAAGACCTGTGGGCCACTGCTTAGAAGCTGC...TCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp CATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGATCCTACTCCAAACTGTaGCCAGCCTCCTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: HGNRNRQKEAWHLGEESGSYSKL*PASFHS
Trigger: ACTGTGGAAGGAGGCTGGCCACAGTTTGGAGTAGGA...TCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTACGCAGGACCTTCCATaGTCCTGGCACAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESTQDLP*SWHRFQ
Trigger: CTGAAATCTGTGCCAGGATCATGGAAGGTCCTGCGT...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000485460.5
CDS-3UTR GCA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTCAACCCAGCCATAGCTaGACCTACAGCAATTCCAGC +
Preference number: 4 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESQPSHS*TYSNSS
Trigger: GCTGGAATTGCTGTAGGTGCAGCTATGGCTGGGTTG...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTTTTAAGCCTGGGCAGTaGCCATACCAGGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESFKPGQ*PYQAAK
Trigger: CTTTGCTGCCTGGTATGGGCACTGCCCAGGCTTAAA...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp AACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTGTGTCCTCTATCCGCTaGCAAACGACAACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: NRNRQKEAWHLGEESGEFVSSIR*QTTTEG
Trigger: CCCCTCTGTTGTCGTTTGGCAGCGGATAGAGGACAC...AAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383714.8
CDS-3UTR TCA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATGCCGGCGCGGTCCAGTaGAAGCGCCTCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNAGAVQ*KRLFSS
Trigger: GCTGCTGAAGAGGCGCTTTCACTGGACCGCGCCGGC...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302746.11
ENST00000469364.5
ENST00000485460.5
CDS-3UTR TCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATGGCAGCTACACCTGCTaGGGCACCATTGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINGSYTC*GTIGPS
Trigger: AGAGGGCCCAATGGTGCCTCAGCAGGTGTAGCTGCC...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
CDS-3UTR TCA 90 bp GAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTCTGAATTCCAGGGACTaGCCACCTTTAAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: EAWHLGEESGEFSIHKHILNSRD*PPLSLG
Trigger: GCCCAGGCTTAAAGGTGGTCAGTCCCTGGAATTCAG...AATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGTGGCCCACAGGTCTTaGATGGGAAACCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESVAHRS*MGNHSY
Trigger: ATAACTGTGGTTTCCCATTCAAGACCTGTGGGCCAC...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCGGACATCAGCACCAGTaGCACGAACAGCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASGHQHQ*HEQQEH
Trigger: ATGCTCCTGCTGTTCGTGTCACTGGTGCTGATGTCC...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TTCAAAGAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGGACATCAGCACCAGTaGCACGAACAGCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: FKEHGNRNRQKEAWHLGEGHQHQ*HEQQEH
Trigger: ATGCTCCTGCTGTTCGTGTCACTGGTGCTGATGTCC...CTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTCTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGCTCCTACTCCAAACTGTGGCCAGCCTCCTTCCACAGTTACAAGATGATTTGTTTCATTCCAGTGAGCTaGGGAATGTGGCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SSYSKLWPASFHSYKMICFIPVS*GMWQPS
Trigger: GGAAGGCTGCCACATTCCTCAGCTCACTGGAATGAA...ACAAATCATCTTGTAACTGTGGAAGGAGGCTGGCCACAGTTTGGAGTAGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp AACGCAGGACCTTCCATGATCCTGGCACAGATTTCAGCTCCTACTCCAAACTGTTCAACTTCATTCCAGTaGGCTGAGGAATGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: NAGPSMILAQISAPTPNCSTSFQ*AEECGS
Trigger: GCTGCCACATTCCTCAGCTCACTGGAATGAAGTTGA...ACAGTTTGGAGTAGGAGCTGAAATCTGTGCCAGGATCATGGAAGGTCCTGCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR CCA 90 bp CATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAAGACAAAAGGAAGCATaGCATCTAGGGGAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HGNRNRQKEAWHLGEESGRQKEA*HLGEES
Trigger: ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCT...TCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp AGGTTGAAACTGAAGATGCTACACCACTGTGCCGCCAGCTGTGGCTCTTGTTCACTGTGCCGCCAGCTGTaGCTCTTGTTCATTCATAAA +
Preference number: 4 (lower is better)
Translates to: RLKLKMLHHCAASCGSCSLCRQL*LLFIHK
Trigger: TTTATGAATGAACAAGAGCCACAGCTGGCGGCACAG...TGAACAAGAGCCACAGCTGGCGGCACAGTGGTGTAGCATCTTCAGTTTCAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR CCA 90 bp GCACCAGTGACACGAACAGCAGGAGCATCCAGGAAATTGAACGCAGGACCTTCCTTCCTGAAAACAGAGTaGTCACAGATCAGAGATCAG +
Preference number: 4 (lower is better)
Translates to: APVTRTAGASRKLNAGPSFLKTE*SQIRDQ
Trigger: CTGATCTCTGATCTGTGACCACTCTGTTTTCAGGAA...GGAAGGTCCTGCGTTCAATTTCCTGGATGCTCCTGCTGTTCGTGTCACTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTCCTCATCCATACCCTaGTTTATAGCATCACGAACT +
Preference number: 4 (lower is better)
Translates to: GNRNRQKEAWHLGEESGESSSIP*FIASRT
Trigger: AGTTCGTGATGCTATAAATCAGGGTATGGATGAGGA...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGAGCAAAGCCCATCTCTaGTATGGGAGTGTCAATAAT +
Preference number: 4 (lower is better)
Translates to: GNRNRQKEAWHLGEESGESKAHL*YGSVNN
Trigger: ATTATTGACACTCCCATATCAGAGATGGGCTTTGCT...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGTTGAAACTGAAGATGCTACACCACTGTGCCGCCAGCTGTGGCTCTTGTTCAGTAGGTCTTGGCAGCTaGGTTTATAACCTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: RLKLKMLHHCAASCGSCSVGLGS*VYNLVN
Trigger: ATTGACCAGGTTATAAACTCAGCTGCCAAGACCTAC...TGAACAAGAGCCACAGCTGGCGGCACAGTGGTGTAGCATCTTCAGTTTCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp AAATCGTTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGGCAGCAAAGCACTGTaGGTGCTGGGCAGCTACACC +
Preference number: 4 (lower is better)
Translates to: KSFSVMNSQVLQYKSRCSGSKAL*VLGSYT
Trigger: GGTGTAGCTGCCCAGCACTCACAGTGCTTTGCTGCC...ACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAACGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCACGCAGGACCTTCCATaGTCCTGGCACAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASTQDLP*SWHRFQ
Trigger: CTGAAATCTGTGCCAGGATCATGGAAGGTCCTGCGT...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000485460.5
CDS-3UTR TCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGATGATGTCTTTGACCTaGGGTATAGAGTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GNRNRQKEAWHLGEESGEMMSLT*GIELSS
Trigger: AGAGGACAACTCTATACCTCAGGTCAAAGACATCAT...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp CAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATCACGAACTGTCACCTaGAGCGCAGCCGGCGCGGTC +
Preference number: 4 (lower is better)
Translates to: QIQVQCQQVFQINFNDLISRTVT*SAAGAV
Trigger: GACCGCGCCGGCTGCGCTGCAGGTGACAGTTCGTGA...TATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302746.11
ENST00000469364.5
ENST00000485460.5
CDS-3UTR GCA 90 bp GTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATGCAAAGCACTGTGAGTaGTGGGCAGCTACACCTGCT +
Preference number: 4 (lower is better)
Translates to: VMNSQVLQYKSRCSASKYAKHCE*WAATPA
Trigger: AGCAGGTGTAGCTGCCCAGCACTCACAGTGCTTTGC...ATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
CDS-3UTR GCA 90 bp GGCATAGGGACATCAGCACCAGTGACACGAACAGCAGGAGCATCCAGGAAATTGTGTGGCAGCCTTCCTTaGCTTTCTATTTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GIGTSAPVTRTAGASRKLCGSLP*LSILAF
Trigger: AAAAGCCAAAATAGAAAGGCAAGGAAGGCTGCCACA...CAATTTCCTGGATGCTCCTGCTGTTCGTGTCACTGGTGCTGATGTCCCTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR CCA 90 bp CATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGCTGAGTTTATAACCTaGTCAATGGCTTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: HGNRNRQKEAWHLGEESGAEFIT*SMACME
Trigger: CTCCATGCAAGCCATTGACCAGGTTATAAACTCAGC...TCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGCCCACAGGTCTTGAATaGGAAACCACAGTTATATGT +
Preference number: 4 (lower is better)
Translates to: GNRNRQKEAWHLGEESGEPTGLE*ETTVIC
Trigger: ACATATAACTGTGGTTTCCCATTCAAGACCTGTGGG...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp TTCAAAGAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGTCCTACTCCAAACTGTaGCCAGCCTCCTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: FKEHGNRNRQKEAWHLGESYSKL*PASFHS
Trigger: ACTGTGGAAGGAGGCTGGCCACAGTTTGGAGTAGGA...CTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTCTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp GAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTCCTACTCCAAACTGTaGCCAGCCTCCTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: EAWHLGEESGEFSIHKHISYSKL*PASFHS
Trigger: ACTGTGGAAGGAGGCTGGCCACAGTTTGGAGTAGGA...AATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTAGACAAAAGGAAGCATaGCATCTAGGGGAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESRQKEA*HLGEES
Trigger: ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCT...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATAGGCAGCTACACCTGCTaGGGCACCATTGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QIQVQCQQVFQINFNDLIGSYTC*GTIGPS
Trigger: AGAGGGCCCAATGGTGCCTCAGCAGGTGTAGCTGCC...TATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
CDS-3UTR TCA 90 bp AGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTGGCAGCAAAGCACTGTaGGTGCTGGGCAGCTACACC +
Preference number: 4 (lower is better)
Translates to: RSCSTNPGAVPASISNKFGSKAL*VLGSYT
Trigger: GGTGTAGCTGCCCAGCACTCACAGTGCTTTGCTGCC...AAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGAATCAGAAAATCTTTTaGCTGAGCTTCCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GNRNRQKEAWHLGEESGENQKIF*LSFRRK
Trigger: TTTCCTCCGGAAGCTCAGTCAAAAGATTTTCTGATT...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCGTGGCCCACAGGTCTTaGATGGGAAACCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASVAHRS*MGNHSY
Trigger: ATAACTGTGGTTTCCCATTCAAGACCTGTGGGCCAC...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp GCAGGACCTTCCATGATCCTGGCACAGATTTCAGCTCCTACTCCAAACTGTGGCAATCGTTTTCCGTTATaGATAGTCAGGTCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: AGPSMILAQISAPTPNCGNRFPL*IVRSCS
Trigger: ACTGCAAGACCTGACTATTCATAACGGAAAACGATT...GCCACAGTTTGGAGTAGGAGCTGAAATCTGTGCCAGGATCATGGAAGGTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR GCA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTACCTGGTCAATGGCTTaGATGGAGAAATTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESTWSMA*MEKLKV
Trigger: GACCTTCAATTTCTCCATGCAAGCCATTGACCAGGT...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGCAAATCCAGGTGCAGTaGCAGCAAGTATTTCAAATA +
Preference number: 4 (lower is better)
Translates to: GNRNRQKEAWHLGEESGEQIQVQ*QQVFQI
Trigger: TATTTGAAATACTTGCTGGCACTGCACCTGGATTTG...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTCAGTACAAATCCAGGTaGAGTGCCAGCAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESQYKSR*SASKYF
Trigger: GAAATACTTGCTGGCACTGCACCTGGATTTGTACTG...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp AACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTAGACAAAAGGAAGCATaGCATCTAGGGGAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: NRNRQKEAWHLGEESGEFRQKEA*HLGEES
Trigger: ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCT...AAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTGGCAGCTACACCTGCTaGGGCACCATTGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: NPGAVPASISNKFQRLDIGSYTC*GTIGPS
Trigger: AGAGGGCCCAATGGTGCCTCAGCAGGTGTAGCTGCC...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
CDS-3UTR TCA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATGGCAGCAAAGCACTGTaGGTGCTGGGCAGCTACACC +
Preference number: 4 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNGSKAL*VLGSYT
Trigger: GGTGTAGCTGCCCAGCACTCACAGTGCTTTGCTGCC...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp ACCAGTGACACGAACAGCAGGAGCATCCAGGAAATTGAACGCAGGACCTTCCATAGAAAATCTTTTGACTaGGCTTCCGGAGGAAATTCA +
Preference number: 4 (lower is better)
Translates to: TSDTNSRSIQEIERRTFHRKSFD*ASGGNS
Trigger: TGAATTTCCTCCGGAAGCTCAGTCAAAAGATTTTCT...ATGGAAGGTCCTGCGTTCAATTTCCTGGATGCTCCTGCTGTTCGTGTCACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATGGACATCAGCACCAGTaGCACGAACAGCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINGHQHQ*HEQQEH
Trigger: ATGCTCCTGCTGTTCGTGTCACTGGTGCTGATGTCC...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTTGGATACATCTTTCATaGGGACTCTGCCACATCCAT +
Preference number: 4 (lower is better)
Translates to: NRNRQKEAWHLGEESGEFWIHLS*GLCHIH
Trigger: ATGGATGTGGCAGAGTCCTCATGAAAGATGTATCCA...AAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp TTCAAAGAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGTCGACTAACCTTGTATaGCCCATCATACTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: FKEHGNRNRQKEAWHLGESTNLV*PIILGN
Trigger: GTTGCCCAGTATGATGGGGCATACAAGGTTAGTCGA...CTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTCTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp GCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCAACCCAGCCATAGCTaGACCTACAGCAATTCCAGC +
Preference number: 4 (lower is better)
Translates to: ASRGGEWRVFHTQTHLNFQPSHS*TYSNSS
Trigger: GCTGGAATTGCTGTAGGTGCAGCTATGGCTGGGTTG...GAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp AGGACTCTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTACAACCCAGCCATAGCTaGACCTACAGCAATTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTLPHPYFVLVVREDKMLQPSHS*TYSNSS
Trigger: GCTGGAATTGCTGTAGGTGCAGCTATGGCTGGGTTG...TAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAGAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATGCAAAGCACTGTGAGTaGTGGGCAGCTACACCTGCT +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINAKHCE*WAATPA
Trigger: AGCAGGTGTAGCTGCCCAGCACTCACAGTGCTTTGC...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
CDS-3UTR GCA 90 bp AGGACTCTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATTTAAGCCTGGGCAGTaGCCATACCAGGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RTLPHPYFVLVVREDKMLFKPGQ*PYQAAK
Trigger: CTTTGCTGCCTGGTATGGGCACTGCCCAGGCTTAAA...TAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAGAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp AACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTGCTGAGTTTATAACCTaGTCAATGGCTTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: NRNRQKEAWHLGEESGEFAEFIT*SMACME
Trigger: CTCCATGCAAGCCATTGACCAGGTTATAAACTCAGC...AAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp AGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCCTGTAGCAGCTTCTAAGCAGTaGCCCACAGGTCTTGAATGG +
Preference number: 4 (lower is better)
Translates to: RGGEWRVFHTQTHLNFPVAASKQ*PTGLEW
Trigger: CCATTCAAGACCTGTGGGCCACTGCTTAGAAGCTGC...TACAGGGAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp CATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGGTTTCCATGTCCATTaGTCTAATGGTACGCATATT +
Preference number: 4 (lower is better)
Translates to: HGNRNRQKEAWHLGEESGGFHVH*SNGTHI
Trigger: AATATGCGTACCATTAGACCAATGGACATGGAAACC...TCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAGACAAAAGGAAGCATaGCATCTAGGGGAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASRQKEA*HLGEES
Trigger: ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCT...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp GCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCAAGCACTGTGAGTGCTaGGCAGCTACACCAGACATG +
Preference number: 4 (lower is better)
Translates to: ASRGGEWRVFHTQTHLNFKHCEC*AATPDM
Trigger: CATGTCTGGTGTAGCTGCCCAGCACTCACAGTGCTT...GAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCCTGTATCCTTTAGCATCCTCTaGATTCCAGGGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: RGGEWRVFHTQTHLNFPVSFSIL*IPGTDH
Trigger: GTGGTCAGTCCCTGGAATTCAGAGGATGCTAAAGGA...TACAGGGAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGACTCTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATCCTTTAGCATCCTCTaGATTCCAGGGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: RTLPHPYFVLVVREDKMLSFSIL*IPGTDH
Trigger: GTGGTCAGTCCCTGGAATTCAGAGGATGCTAAAGGA...TAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAGAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AACGCAGGACCTTCCATGATCCTGGCACAGATTTCAGCTCCTACTCCAAACTGTGTTATCCCGAATGGCTaGTTTAATAAGTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: NAGPSMILAQISAPTPNCVIPNG*FNKSFS
Trigger: GCTAAAGGACTTATTAAATCAGCCATTCGGGATAAC...ACAGTTTGGAGTAGGAGCTGAAATCTGTGCCAGGATCATGGAAGGTCCTGCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTAGAAAATCTTTTGACTaGGCTTCCGGAGGAAATTCA +
Preference number: 4 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESRKSFD*ASGGNS
Trigger: TGAATTTCCTCCGGAAGCTCAGTCAAAAGATTTTCT...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATACGCAGGACCTTCCATaGTCCTGGCACAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINTQDLP*SWHRFQ
Trigger: CTGAAATCTGTGCCAGGATCATGGAAGGTCCTGCGT...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000485460.5
CDS-3UTR TCA 90 bp CATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAACTTTGTCCTTGTGGTaGGAGAGGATAAAATGTTAT +
Preference number: 4 (lower is better)
Translates to: HGNRNRQKEAWHLGEESGTLSLW*ERIKCY
Trigger: ATAACATTTTATCCTCTCTCACCACAAGGACAAAGT...TCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp GTCTTCATGACACTGGCTTCTATGGTTTCCATGTCCATTGGTCTAATGGTACGCACCTGGTCAATGGCTTaGATGGAGAAATTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VFMTLASMVSMSIGLMVRTWSMA*MEKLKV
Trigger: GACCTTCAATTTCTCCATGCAAGCCATTGACCAGGT...GCGTACCATTAGACCAATGGACATGGAAACCATAGAAGCCAGTGTCATGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR GCA 90 bp AAATCGTTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTTTTAAGCCTGGGCAGTaGCCATACCAGGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KSFSVMNSQVLQYKSRCSFKPGQ*PYQAAK
Trigger: CTTTGCTGCCTGGTATGGGCACTGCCCAGGCTTAAA...ACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAACGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp TTCAAAGAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGCAGTACAAATCCAGGTaGAGTGCCAGCAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: FKEHGNRNRQKEAWHLGEQYKSR*SASKYF
Trigger: GAAATACTTGCTGGCACTGCACCTGGATTTGTACTG...CTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTCTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCCAGTACAAATCCAGGTaGAGTGCCAGCAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASQYKSR*SASKYF
Trigger: GAAATACTTGCTGGCACTGCACCTGGATTTGTACTG...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp CAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATAACACCGCCGCCATCTTaGTCGTGTCCTCTATCCGCT +
Preference number: 4 (lower is better)
Translates to: QIQVQCQQVFQINFNDLITPPPS*SCPLSA
Trigger: AGCGGATAGAGGACACGACCAAGATGGCGGCGGTGT...TATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302746.11
ENST00000383714.8
CDS-3UTR CCA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCGCTGAGTTTATAACCTaGTCAATGGCTTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASAEFIT*SMACME
Trigger: CTCCATGCAAGCCATTGACCAGGTTATAAACTCAGC...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp AAATCGTTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCAGCTTCTAAGCAGTaGCCCACAGGTCTTGAATGG +
Preference number: 4 (lower is better)
Translates to: KSFSVMNSQVLQYKSRCSAASKQ*PTGLEW
Trigger: CCATTCAAGACCTGTGGGCCACTGCTTAGAAGCTGC...ACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAACGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp AAATCGTTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTTCCTACTCCAAACTGTaGCCAGCCTCCTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: KSFSVMNSQVLQYKSRCSSYSKL*PASFHS
Trigger: ACTGTGGAAGGAGGCTGGCCACAGTTTGGAGTAGGA...ACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAACGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TTCAAAGAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGTCCTCATCCATACCCTaGTTTATAGCATCACGAACT +
Preference number: 4 (lower is better)
Translates to: FKEHGNRNRQKEAWHLGESSSIP*FIASRT
Trigger: AGTTCGTGATGCTATAAATCAGGGTATGGATGAGGA...CTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATCTGAATTCCAGGGACTaGCCACCTTTAAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNLNSRD*PPLSLG
Trigger: GCCCAGGCTTAAAGGTGGTCAGTCCCTGGAATTCAG...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TCCTTCCACAGTTACAAGATGATTTGTCTTCATGACACTGGCTTCTATGGTTTCTCCTTTAGCATCCTCTaGATTCCAGGGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: SFHSYKMICLHDTGFYGFSFSIL*IPGTDH
Trigger: GTGGTCAGTCCCTGGAATTCAGAGGATGCTAAAGGA...GAAACCATAGAAGCCAGTGTCATGAAGACAAATCATCTTGTAACTGTGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp AACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTGATGATTTGTCTTCATaGCACTGGCTTCTATGGTTT +
Preference number: 4 (lower is better)
Translates to: NRNRQKEAWHLGEESGEFDDLSS*HWLLWF
Trigger: AAACCATAGAAGCCAGTGTCATGAAGACAAATCATC...AAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp GTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTGGATACATCTTTCATaGGGACTCTGCCACATCCAT +
Preference number: 4 (lower is better)
Translates to: VMNSQVLQYKSRCSASKYWIHLS*GLCHIH
Trigger: ATGGATGTGGCAGAGTCCTCATGAAAGATGTATCCA...ATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp GTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATACCTGGTCAATGGCTTaGATGGAGAAATTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VMNSQVLQYKSRCSASKYTWSMA*MEKLKV
Trigger: GACCTTCAATTTCTCCATGCAAGCCATTGACCAGGT...ATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp AGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTTTTAAGCCTGGGCAGTaGCCATACCAGGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RSCSTNPGAVPASISNKFFKPGQ*PYQAAK
Trigger: CTTTGCTGCCTGGTATGGGCACTGCCCAGGCTTAAA...AAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTACACCGCCGCCATCTTaGTCGTGTCCTCTATCCGCT +
Preference number: 4 (lower is better)
Translates to: NPGAVPASISNKFQRLDITPPPS*SCPLSA
Trigger: AGCGGATAGAGGACACGACCAAGATGGCGGCGGTGT...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302746.11
ENST00000383714.8
CDS-3UTR CCA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCCCCACAGGTCTTGAATaGGAAACCACAGTTATATGT +
Preference number: 4 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASPTGLE*ETTVIC
Trigger: ACATATAACTGTGGTTTCCCATTCAAGACCTGTGGG...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCTGAATTCCAGGGACTaGCCACCTTTAAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NPGAVPASISNKFQRLDILNSRD*PPLSLG
Trigger: GCCCAGGCTTAAAGGTGGTCAGTCCCTGGAATTCAG...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACTCCTTTAGCATCCTCTaGATTCCAGGGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: LAVQIQVQCQQVFQINFNSFSIL*IPGTDH
Trigger: GTGGTCAGTCCCTGGAATTCAGAGGATGCTAAAGGA...GTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAGAAAATCTTTTGACTaGGCTTCCGGAGGAAATTCA +
Preference number: 4 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASRKSFD*ASGGNS
Trigger: TGAATTTCCTCCGGAAGCTCAGTCAAAAGATTTTCT...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TTCAAAGAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGATGATTTGTCTTCATaGCACTGGCTTCTATGGTTT +
Preference number: 4 (lower is better)
Translates to: FKEHGNRNRQKEAWHLGEDDLSS*HWLLWF
Trigger: AAACCATAGAAGCCAGTGTCATGAAGACAAATCATC...CTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTCTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp ATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCACGCAGGACCTTCCATaGTCCTGGCACAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: IQVQCQQVFQINFNDLIFTQDLP*SWHRFQ
Trigger: CTGAAATCTGTGCCAGGATCATGGAAGGTCCTGCGT...GAATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000485460.5
CDS-3UTR TCA 90 bp GTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATATGATGTCTTTGACCTaGGGTATAGAGTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VMNSQVLQYKSRCSASKYMMSLT*GIELSS
Trigger: AGAGGACAACTCTATACCTCAGGTCAAAGACATCAT...ATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGACTCTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATGGATACATCTTTCATaGGGACTCTGCCACATCCAT +
Preference number: 4 (lower is better)
Translates to: RTLPHPYFVLVVREDKMLWIHLS*GLCHIH
Trigger: ATGGATGTGGCAGAGTCCTCATGAAAGATGTATCCA...TAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAGAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp ATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCCAACCCAGCCATAGCTaGACCTACAGCAATTCCAGC +
Preference number: 4 (lower is better)
Translates to: IQVQCQQVFQINFNDLIFQPSHS*TYSNSS
Trigger: GCTGGAATTGCTGTAGGTGCAGCTATGGCTGGGTTG...GAATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATCAACCCAGCCATAGCTaGACCTACAGCAATTCCAGC +
Preference number: 4 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNQPSHS*TYSNSS
Trigger: GCTGGAATTGCTGTAGGTGCAGCTATGGCTGGGTTG...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp GAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTCAAATCCAGGTGCAGTaGCAGCAAGTATTTCAAATA +
Preference number: 4 (lower is better)
Translates to: EAWHLGEESGEFSIHKHIQIQVQ*QQVFQI
Trigger: TATTTGAAATACTTGCTGGCACTGCACCTGGATTTG...AATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp AGATCAGAGATCAGGTTGAAACTGAAGATGCTACACCACTGTGCCGCCAGCTGTCTGTACAAAAATACCTaGTGTTGCTTTAGAAATCGT +
Preference number: 4 (lower is better)
Translates to: RSEIRLKLKMLHHCAASCLYKNT*CCFRNR
Trigger: ACGATTTCTAAAGCAACAGCAGGTATTTTTGTACAG...ACAGCTGGCGGCACAGTGGTGTAGCATCTTCAGTTTCAACCTGATCTCTGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR CCA 90 bp AAATCGTTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTTATGCCCCATCATACTaGGCAACTTCTTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: KSFSVMNSQVLQYKSRCSYAPSY*ATSSPS
Trigger: GCTTGGAGAAGAAGTTGCCCAGTATGATGGGGCATA...ACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAACGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTATGCCCCATCATACTaGGCAACTTCTTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINYAPSY*ATSSPS
Trigger: GCTTGGAGAAGAAGTTGCCCAGTATGATGGGGCATA...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATGCAGCTTCTAAGCAGTaGCCCACAGGTCTTGAATGG +
Preference number: 4 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNAASKQ*PTGLEW
Trigger: CCATTCAAGACCTGTGGGCCACTGCTTAGAAGCTGC...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCGGTTTCCATGTCCATTaGTCTAATGGTACGCATATT +
Preference number: 4 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASGFHVH*SNGTHI
Trigger: AATATGCGTACCATTAGACCAATGGACATGGAAACC...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp ATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCTCCTACTCCAAACTGTaGCCAGCCTCCTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: IQVQCQQVFQINFNDLIFSYSKL*PASFHS
Trigger: ACTGTGGAAGGAGGCTGGCCACAGTTTGGAGTAGGA...GAATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp AAATCGTTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTAGACAAAAGGAAGCATaGCATCTAGGGGAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: KSFSVMNSQVLQYKSRCSRQKEA*HLGEES
Trigger: ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCT...ACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAACGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCCTGTAAGCAAAGCCCATCTCTaGTATGGGAGTGTCAATAAT +
Preference number: 4 (lower is better)
Translates to: RGGEWRVFHTQTHLNFPVSKAHL*YGSVNN
Trigger: ATTATTGACACTCCCATATCAGAGATGGGCTTTGCT...TACAGGGAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp GCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACGTAGGTCTTGGCAGCTaGGTTTATAACCTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: AVQIQVQCQQVFQINFNDVGLGS*VYNLVN
Trigger: ATTGACCAGGTTATAAACTCAGCTGCCAAGACCTAC...GTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp ACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATGTGGCCCACAGGTCTTaGATGGGAAACCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: TNPGAVPASISNKFQRLDVAHRS*MGNHSY
Trigger: ATAACTGTGGTTTCCCATTCAAGACCTGTGGGCCAC...ATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp GTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATGATGATTTGTCTTCATaGCACTGGCTTCTATGGTTT +
Preference number: 4 (lower is better)
Translates to: VMNSQVLQYKSRCSASKYDDLSS*HWLLWF
Trigger: AAACCATAGAAGCCAGTGTCATGAAGACAAATCATC...ATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCCTGTAATGATGTCTTTGACCTaGGGTATAGAGTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RGGEWRVFHTQTHLNFPVMMSLT*GIELSS
Trigger: AGAGGACAACTCTATACCTCAGGTCAAAGACATCAT...TACAGGGAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp GAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTACTTTGTCCTTGTGGTaGGAGAGGATAAAATGTTAT +
Preference number: 4 (lower is better)
Translates to: EAWHLGEESGEFSIHKHITLSLW*ERIKCY
Trigger: ATAACATTTTATCCTCTCTCACCACAAGGACAAAGT...AATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TTCAAAGAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGACTTTGTCCTTGTGGTaGGAGAGGATAAAATGTTAT +
Preference number: 4 (lower is better)
Translates to: FKEHGNRNRQKEAWHLGETLSLW*ERIKCY
Trigger: ATAACATTTTATCCTCTCTCACCACAAGGACAAAGT...CTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTCTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp AAATCGTTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTACCTGGTCAATGGCTTaGATGGAGAAATTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: KSFSVMNSQVLQYKSRCSTWSMA*MEKLKV
Trigger: GACCTTCAATTTCTCCATGCAAGCCATTGACCAGGT...ACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAACGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp GCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACACCTGGTCAATGGCTTaGATGGAGAAATTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: AVQIQVQCQQVFQINFNDTWSMA*MEKLKV
Trigger: GACCTTCAATTTCTCCATGCAAGCCATTGACCAGGT...GTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTTTTAAGCCTGGGCAGTaGCCATACCAGGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NPGAVPASISNKFQRLDIFKPGQ*PYQAAK
Trigger: CTTTGCTGCCTGGTATGGGCACTGCCCAGGCTTAAA...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATCAGTACAAATCCAGGTaGAGTGCCAGCAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINQYKSR*SASKYF
Trigger: GAAATACTTGCTGGCACTGCACCTGGATTTGTACTG...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGACTCTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTAGTTATCCCGAATGGCTaGTTTAATAAGTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: RTLPHPYFVLVVREDKMLVIPNG*FNKSFS
Trigger: GCTAAAGGACTTATTAAATCAGCCATTCGGGATAAC...TAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAGAGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCCTGTAAATCAGAAAATCTTTTaGCTGAGCTTCCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: RGGEWRVFHTQTHLNFPVNQKIF*LSFRRK
Trigger: TTTCCTCCGGAAGCTCAGTCAAAAGATTTTCTGATT...TACAGGGAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTGTGGCCCACAGGTCTTaGATGGGAAACCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: NPGAVPASISNKFQRLDIVAHRS*MGNHSY
Trigger: ATAACTGTGGTTTCCCATTCAAGACCTGTGGGCCAC...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCCTGTATCCACAGTTACAAGATaGTTTGTCTTCATGACACTG +
Preference number: 4 (lower is better)
Translates to: RGGEWRVFHTQTHLNFPVSTVTR*FVFMTL
Trigger: CAGTGTCATGAAGACAAATCATCTTGTAACTGTGGA...TACAGGGAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGACTCTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTAAATCGTTTTCCGTTATaGATAGTCAGGTCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: RTLPHPYFVLVVREDKMLNRFPL*IVRSCS
Trigger: ACTGCAAGACCTGACTATTCATAACGGAAAACGATT...TAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAGAGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATGAGCATCCAGGAAATTaGACGCAGGACAAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINEHPGN*TQDKFK
Trigger: TTTAAACTTGTCCTGCGTTCAATTTCCTGGATGCTC...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474765.1
CDS-3UTR GCA 90 bp ATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCTCGACTAACCTTGTATaGCCCATCATACTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: IQVQCQQVFQINFNDLIFSTNLV*PIILGN
Trigger: GTTGCCCAGTATGATGGGGCATACAAGGTTAGTCGA...GAATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp AGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCCTGTACAAATCCAGGTGCAGTaGCAGCAAGTATTTCAAATA +
Preference number: 4 (lower is better)
Translates to: RGGEWRVFHTQTHLNFPVQIQVQ*QQVFQI
Trigger: TATTTGAAATACTTGCTGGCACTGCACCTGGATTTG...TACAGGGAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCCTGTACAAAAATACCTaGTGTTGCTTTAGAAATCGT +
Preference number: 4 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASLYKNT*CCFRNR
Trigger: ACGATTTCTAAAGCAACAGCAGGTATTTTTGTACAG...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp ACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATTATGCCCCATCATACTaGGCAACTTCTTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TNPGAVPASISNKFQRLDYAPSY*ATSSPS
Trigger: GCTTGGAGAAGAAGTTGCCCAGTATGATGGGGCATA...ATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATCCCACAGGTCTTGAATaGGAAACCACAGTTATATGT +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINPTGLE*ETTVIC
Trigger: ACATATAACTGTGGTTTCCCATTCAAGACCTGTGGG...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp GCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACCCCACAGGTCTTGAATaGGAAACCACAGTTATATGT +
Preference number: 4 (lower is better)
Translates to: AVQIQVQCQQVFQINFNDPTGLE*ETTVIC
Trigger: ACATATAACTGTGGTTTCCCATTCAAGACCTGTGGG...GTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp GCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCGGTTTCCATGTCCATTaGTCTAATGGTACGCATATT +
Preference number: 4 (lower is better)
Translates to: ASRGGEWRVFHTQTHLNFGFHVH*SNGTHI
Trigger: AATATGCGTACCATTAGACCAATGGACATGGAAACC...GAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp AGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCCTGTAGGTTTCCATGTCCATTaGTCTAATGGTACGCATATT +
Preference number: 4 (lower is better)
Translates to: RGGEWRVFHTQTHLNFPVGFHVH*SNGTHI
Trigger: AATATGCGTACCATTAGACCAATGGACATGGAAACC...TACAGGGAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATAGTAGGTCTTGGCAGCTaGGTTTATAACCTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: QIQVQCQQVFQINFNDLIVGLGS*VYNLVN
Trigger: ATTGACCAGGTTATAAACTCAGCTGCCAAGACCTAC...TATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp ATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCGTAGGTCTTGGCAGCTaGGTTTATAACCTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: IQVQCQQVFQINFNDLIFVGLGS*VYNLVN
Trigger: ATTGACCAGGTTATAAACTCAGCTGCCAAGACCTAC...GAATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATGTAGGTCTTGGCAGCTaGGTTTATAACCTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNVGLGS*VYNLVN
Trigger: ATTGACCAGGTTATAAACTCAGCTGCCAAGACCTAC...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATGTTATCCCGAATGGCTaGTTTAATAAGTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINVIPNG*FNKSFS
Trigger: GCTAAAGGACTTATTAAATCAGCCATTCGGGATAAC...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATAATCAGAAAATCTTTTaGCTGAGCTTCCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINNQKIF*LSFRRK
Trigger: TTTCCTCCGGAAGCTCAGTCAAAAGATTTTCTGATT...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp GCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACAATCAGAAAATCTTTTaGCTGAGCTTCCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: AVQIQVQCQQVFQINFNDNQKIF*LSFRRK
Trigger: TTTCCTCCGGAAGCTCAGTCAAAAGATTTTCTGATT...GTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATGATGATTTGTCTTCATaGCACTGGCTTCTATGGTTT +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINDDLSS*HWLLWF
Trigger: AAACCATAGAAGCCAGTGTCATGAAGACAAATCATC...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CATGTCCATTGGTCTAATGGTACGCATATTTATCACCTCACATTCAACTCCTTCTCCACAGTTACAAGATaGTTTGTCTTCATGACACTG +
Preference number: 4 (lower is better)
Translates to: HVHWSNGTHIYHLTFNSFSTVTR*FVFMTL
Trigger: CAGTGTCATGAAGACAAATCATCTTGTAACTGTGGA...GAAGGAGTTGAATGTGAGGTGATAAATATGCGTACCATTAGACCAATGGACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp AAATCGTTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTAATCGTTTTCCGTTATaGATAGTCAGGTCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: KSFSVMNSQVLQYKSRCSNRFPL*IVRSCS
Trigger: ACTGCAAGACCTGACTATTCATAACGGAAAACGATT...ACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAACGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp GCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCACTTTGTCCTTGTGGTaGGAGAGGATAAAATGTTAT +
Preference number: 4 (lower is better)
Translates to: ASRGGEWRVFHTQTHLNFTLSLW*ERIKCY
Trigger: ATAACATTTTATCCTCTCTCACCACAAGGACAAAGT...GAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATTGGATACATCTTTCATaGGGACTCTGCCACATCCAT +
Preference number: 4 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNWIHLS*GLCHIH
Trigger: ATGGATGTGGCAGAGTCCTCATGAAAGATGTATCCA...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp GTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATCTGTACAAAAATACCTaGTGTTGCTTTAGAAATCGT +
Preference number: 4 (lower is better)
Translates to: VMNSQVLQYKSRCSASKYLYKNT*CCFRNR
Trigger: ACGATTTCTAAAGCAACAGCAGGTATTTTTGTACAG...ATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp CAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATAGCTGAGTTTATAACCTaGTCAATGGCTTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: QIQVQCQQVFQINFNDLIAEFIT*SMACME
Trigger: CTCCATGCAAGCCATTGACCAGGTTATAAACTCAGC...TATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATGCTGAGTTTATAACCTaGTCAATGGCTTGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNAEFIT*SMACME
Trigger: CTCCATGCAAGCCATTGACCAGGTTATAAACTCAGC...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp CATGTCCATTGGTCTAATGGTACGCATATTTATCACCTCACATTCAACTCCTTCGGTTTCCATGTCCATTaGTCTAATGGTACGCATATT +
Preference number: 4 (lower is better)
Translates to: HVHWSNGTHIYHLTFNSFGFHVH*SNGTHI
Trigger: AATATGCGTACCATTAGACCAATGGACATGGAAACC...GAAGGAGTTGAATGTGAGGTGATAAATATGCGTACCATTAGACCAATGGACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp CAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATAAGCAAAGCCCATCTCTaGTATGGGAGTGTCAATAAT +
Preference number: 4 (lower is better)
Translates to: QIQVQCQQVFQINFNDLISKAHL*YGSVNN
Trigger: ATTATTGACACTCCCATATCAGAGATGGGCTTTGCT...TATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGTTATCCCGAATGGCTaGTTTAATAAGTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: LAVQIQVQCQQVFQINFNVIPNG*FNKSFS
Trigger: GCTAAAGGACTTATTAAATCAGCCATTCGGGATAAC...GTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTTCCACAGTTACAAGATaGTTTGTCTTCATGACACTG +
Preference number: 4 (lower is better)
Translates to: RSCSTNPGAVPASISNKFSTVTR*FVFMTL
Trigger: CAGTGTCATGAAGACAAATCATCTTGTAACTGTGGA...AAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACTCCACAGTTACAAGATaGTTTGTCTTCATGACACTG +
Preference number: 4 (lower is better)
Translates to: LAVQIQVQCQQVFQINFNSTVTR*FVFMTL
Trigger: CAGTGTCATGAAGACAAATCATCTTGTAACTGTGGA...GTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp ACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATGATGTCTTTGACCTaGGGTATAGAGTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TNPGAVPASISNKFQRLDMMSLT*GIELSS
Trigger: AGAGGACAACTCTATACCTCAGGTCAAAGACATCAT...ATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACAATCGTTTTCCGTTATaGATAGTCAGGTCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LAVQIQVQCQQVFQINFNNRFPL*IVRSCS
Trigger: ACTGCAAGACCTGACTATTCATAACGGAAAACGATT...GTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTAATCGTTTTCCGTTATaGATAGTCAGGTCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSCSTNPGAVPASISNKFNRFPL*IVRSCS
Trigger: ACTGCAAGACCTGACTATTCATAACGGAAAACGATT...AAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CATGTCCATTGGTCTAATGGTACGCATATTTATCACCTCACATTCAACTCCTTCACTTTGTCCTTGTGGTaGGAGAGGATAAAATGTTAT +
Preference number: 4 (lower is better)
Translates to: HVHWSNGTHIYHLTFNSFTLSLW*ERIKCY
Trigger: ATAACATTTTATCCTCTCTCACCACAAGGACAAAGT...GAAGGAGTTGAATGTGAGGTGATAAATATGCGTACCATTAGACCAATGGACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR TCA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTTGGATACATCTTTCATaGGGACTCTGCCACATCCAT +
Preference number: 4 (lower is better)
Translates to: NPGAVPASISNKFQRLDIWIHLS*GLCHIH
Trigger: ATGGATGTGGCAGAGTCCTCATGAAAGATGTATCCA...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCAGTACAAATCCAGGTaGAGTGCCAGCAAGTATTTC +
Preference number: 4 (lower is better)
Translates to: NPGAVPASISNKFQRLDIQYKSR*SASKYF
Trigger: GAAATACTTGCTGGCACTGCACCTGGATTTGTACTG...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTAGCAAAGCCCATCTCTaGTATGGGAGTGTCAATAAT +
Preference number: 4 (lower is better)
Translates to: NPGAVPASISNKFQRLDISKAHL*YGSVNN
Trigger: ATTATTGACACTCCCATATCAGAGATGGGCTTTGCT...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATAGTTATCCCGAATGGCTaGTTTAATAAGTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: QIQVQCQQVFQINFNDLIVIPNG*FNKSFS
Trigger: GCTAAAGGACTTATTAAATCAGCCATTCGGGATAAC...TATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp ATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCAGAAAATCTTTTGACTaGGCTTCCGGAGGAAATTCA +
Preference number: 4 (lower is better)
Translates to: IQVQCQQVFQINFNDLIFRKSFD*ASGGNS
Trigger: TGAATTTCCTCCGGAAGCTCAGTCAAAAGATTTTCT...GAATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR TCA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATAATCAGAAAATCTTTTaGCTGAGCTTCCGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNNQKIF*LSFRRK
Trigger: TTTCCTCCGGAAGCTCAGTCAAAAGATTTTCTGATT...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp CAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATACAAATCCAGGTGCAGTaGCAGCAAGTATTTCAAATA +
Preference number: 4 (lower is better)
Translates to: QIQVQCQQVFQINFNDLIQIQVQ*QQVFQI
Trigger: TATTTGAAATACTTGCTGGCACTGCACCTGGATTTG...TATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp TCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATCTGTACAAAAATACCTaGTGTTGCTTTAGAAATCGT +
Preference number: 4 (lower is better)
Translates to: SGLAVQIQVQCQQVFQINLYKNT*CCFRNR
Trigger: ACGATTTCTAAAGCAACAGCAGGTATTTTTGTACAG...ATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CCA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCCCACAGGTCTTGAATaGGAAACCACAGTTATATGT +
Preference number: 4 (lower is better)
Translates to: NPGAVPASISNKFQRLDIPTGLE*ETTVIC
Trigger: ACATATAACTGTGGTTTCCCATTCAAGACCTGTGGG...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR GCA 90 bp AGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCTGTACAAAAATACCTaGTGTTGCTTTAGAAATCGT +
Preference number: 4 (lower is better)
Translates to: RSCSTNPGAVPASISNKFLYKNT*CCFRNR
Trigger: ACGATTTCTAAAGCAACAGCAGGTATTTTTGTACAG...AAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS GCA 90 bp CGCAGGGTGGGCAGGGGTCGCGTGGGAATACAGGCCGCGCGCTGCTaGCTACCTCCCGAAGGGGTCTCCGCACCAAGCCAGACACCGCCG +
Preference number: 5 (lower is better)
Translates to: RRVGRGRVGIQAARC*LPPEGVSAPSQTPP
Trigger: CGGCGGTGTCTGGCTTGGTGCGGAGACCCCTTCGGGAGGTAGGCAGCAGCGCGCGGCCTGTATTCCCACGCGACCCCTGCCCACCCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461692.5
CDS GCA 90 bp GGACGCAGGGTGGGCAGGGGTCGCGTGGGAATACAGGCCGCGCGCTaGTGCCTACCTCCCGAAGGGGTCTCCGCACCAAGCCAGACACCG +
Preference number: 5 (lower is better)
Translates to: GRRVGRGRVGIQAAR*CLPPEGVSAPSQTP
Trigger: CGGTGTCTGGCTTGGTGCGGAGACCCCTTCGGGAGGTAGGCAGCAGCGCGCGGCCTGTATTCCCACGCGACCCCTGCCCACCCTGCGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461692.5
CDS TCA 90 bp CGAGCACCCGCGCCTGTTACCTGCAGCGCAGCCGGCGCGGTCCAGTaGAAGCGCCTCTTCAGCAGCCCGGAGACCTCCCGAAGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: RAPAPVTCSAAGAVQ*KRLFSSPETSRRGL
Trigger: GAGACCCCTTCGGGAGGTCTCCGGGCTGCTGAAGAGGCGCTTTCACTGGACCGCGCCGGCTGCGCTGCAGGTAACAGGCGCGGGTGCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS CCA 90 bp CCTCCCGAAGGGGTCTCCGCACCAAGCCAGACACCGCCGCCATCTTaGTCGTGTCCTCTATCCGCTGCCAAACGACAACAGAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: PPEGVSAPSQTPPPS*SCPLSAAKRQQRGR
Trigger: CCGGCCCCTCTGTTGTCGTTTGGCAGCGGATAGAGGACACGACCAAGATGGCGGCGGTGTCTGGCTTGGTGCGGAGACCCCTTCGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383714.8
CDS TCA 90 bp ATAGCATCACGAACTGTCACCTGCAGCGCAGCCGGCGCGGTCCAGTaGAAGCGCCTCTTCAGCAGCCCGGAGACCTCCCGAAGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: IASRTVTCSAAGAVQ*KRLFSSPETSRRGL
Trigger: GAGACCCCTTCGGGAGGTCTCCGGGCTGCTGAAGAGGCGCTTTCACTGGACCGCGCCGGCTGCGCTGCAGGTGACAGTTCGTGATGCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302746.11
ENST00000469364.5
ENST00000469827.1
ENST00000480626.5
ENST00000482894.5
ENST00000485460.5
CDS TCA 90 bp ATAGCATCACGAACTGTCACCTGCAGCGCAGCCGGCGCGGTCCAGTaGAAGCGCCTCTTCAGCAGCCCGGAGACCTGGCAGGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: IASRTVTCSAAGAVQ*KRLFSSPETWQGER
Trigger: CCTCTCTCCCTGCCAGGTCTCCGGGCTGCTGAAGAGGCGCTTTCACTGGACCGCGCCGGCTGCGCTGCAGGTGACAGTTCGTGATGCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461692.5
CDS GCA 90 bp CATTGCCCAGCCAGCTGTGAGGTGGTGACTCGCCGGTGTGCTAATTaGCAGGCGGCGACAGAGGCAGCAGGAGCTCCACGGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: HCPASCEVVTRRCAN*QAATEAAGAPRRML
Trigger: CAGCATCCTCCGTGGAGCTCCTGCTGCCTCTGTCGCCGCCTGGCAATTAGCACACCGGCGAGTCACCACCTCACAGCTGGCTGGGCAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS-3UTR CAA 90 bp ACCAGTGACACGAACAGCAGGAGCATCCAGGAAATTGAACGCAGGACCTTCCATAGTGGCCCACAGGTCTaGAATGGGAAACCACAGTTA +
Preference number: 5 (lower is better)
Translates to: TSDTNSRSIQEIERRTFHSGPQV*NGKPQL
Trigger: TAACTGTGGTTTCCCATTCAAGACCTGTGGGCCACT...ATGGAAGGTCCTGCGTTCAATTTCCTGGATGCTCCTGCTGTTCGTGTCACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR CAA 90 bp TGGTCACAGATCAGAGATCAGGTTGAAACTGAAGATGCTACACCACTGTGCCGCGGAGCATCCAGGAAATaGAACGCAGGACCTTCCATG +
Preference number: 5 (lower is better)
Translates to: WSQIRDQVETEDATPLCRGASRK*NAGPSM
Trigger: CATGGAAGGTCCTGCGTTCAATTTCCTGGATGCTCC...GCGGCACAGTGGTGTAGCATCTTCAGTTTCAACCTGATCTCTGATCTGTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR CAA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTAGCACCACCACTGGATaGTTATCCCGAATGGCTGAT +
Preference number: 5 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESSTTTG*LSRMAD
Trigger: ATCAGCCATTCGGGATAACAATCCAGTGGTGGTGCT...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS TCA 90 bp AGGCACAGGCTGAAGGCCACCAGACATGTAGTAGGTCTTGGCAGCTaGGTTTATAACCTGGTCAATGGCTTGCATGGAGAAATTGAAGGT +
Preference number: 5 (lower is better)
Translates to: RHRLKATRHVVGLGS*VYNLVNGLHGEIEG
Trigger: ACCTTCAATTTCTCCATGCAAGCCATTGACCAGGTTATAAACTCAGCTGCCAAGACCTACTACATGTCTGGTGGCCTTCAGCCTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000461692.5
ENST00000469364.5
ENST00000474765.1
ENST00000479945.1
ENST00000480626.5
CDS TCA 90 bp CAGACATGCCCTCCAGGGTCTGCTTCCCACTGGAAGGCTTACCTCTaGTATGGGAGTGTCAATAATCCTCTTGTCTCCATATTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: QTCPPGSASHWKAYL*YGSVNNPLVSIFLP
Trigger: TGGAAGAAATATGGAGACAAGAGGATTATTGACACTCCCATATCAGAGGTAAGCCTTCCAGTGGGAAGCAGACCCTGGAGGGCATGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469827.1
ENST00000479945.1
CDS-3UTR CAA 90 bp GGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGGAATCAGAAAATCTTTaGACTGAGCTTCCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GNRNRQKEAWHLGEESGEESENL*TELPEE
Trigger: TTCCTCCGGAAGCTCAGTCAAAAGATTTTCTGATTC...CTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp CATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAATGAATAGTCAGGTCTaGCAGTACAAATCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: HGNRNRQKEAWHLGEESGMNSQV*QYKSRC
Trigger: GCACCTGGATTTGTACTGCAAGACCTGACTATTCAT...TCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp AGGACTCTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTACCTGCTGAGGCACCATaGGGCCCTCTGAAGACTATA +
Preference number: 5 (lower is better)
Translates to: RTLPHPYFVLVVREDKMLPAEAP*GPLKTI
Trigger: TATAGTCTTCAGAGGGCCCAATGGTGCCTCAGCAGG...TAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAGAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
CDS-3UTR CAA 90 bp TTCAAAGAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGAGCACCACCACTGGATaGTTATCCCGAATGGCTGAT +
Preference number: 5 (lower is better)
Translates to: FKEHGNRNRQKEAWHLGESTTTG*LSRMAD
Trigger: ATCAGCCATTCGGGATAACAATCCAGTGGTGGTGCT...CTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTCTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp TGGTCACAGATCAGAGATCAGGTTGAAACTGAAGATGCTACACCACTGTGCCGCATGTGGCAGCCTTCCTaGCCTTTCTATTTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: WSQIRDQVETEDATPLCRMWQPS*PFYFGF
Trigger: AAAGCCAAAATAGAAAGGCAAGGAAGGCTGCCACAT...GCGGCACAGTGGTGTAGCATCTTCAGTTTCAACCTGATCTCTGATCTGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR CAA 90 bp AACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTCGCCAGCTGTGGCTCTaGTTCATTCATAAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: NRNRQKEAWHLGEESGEFRQLWL*FIHKVF
Trigger: GAAGACTTTATGAATGAACAAGAGCCACAGCTGGCG...AAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS CCA 90 bp GATAGCACTGCTGCAGCTTCTAAGCAGTGGCCCACAGGTCTTGAATaGGAAACCACAGTTATATGTGTTCCTTGCCTTTCTATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: DSTAAASKQWPTGLE*ETTVICVPCLSILA
Trigger: AGCCAAAATAGAAAGGCAAGGAACACATATAACTGTGGTTTCCCATTCAAGACCTGTGGGCCACTGCTTAGAAGCTGCAGCAGTGCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000461692.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp GAACATGGCAACCGTAACAGACAAAAGGAAGCATGGCATCTAGGGGAGGAGAGTGAATCAGAAAATCTTTaGACTGAGCTTCCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: EHGNRNRQKEAWHLGEESESENL*TELPEE
Trigger: TTCCTCCGGAAGCTCAGTCAAAAGATTTTCTGATTC...ACTCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp GCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCGGAGCATCCAGGAAATaGAACGCAGGACCTTCCATG +
Preference number: 5 (lower is better)
Translates to: ASRGGEWRVFHTQTHLNFGASRK*NAGPSM
Trigger: CATGGAAGGTCCTGCGTTCAATTTCCTGGATGCTCC...GAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000485460.5
CDS-3UTR CAA 90 bp GCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACAGCCCTCGACTAACCTaGTATGCCCCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: AVQIQVQCQQVFQINFNDSPRLT*YAPSYW
Trigger: CCAGTATGATGGGGCATACAAGGTTAGTCGAGGGCT...GTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp AAATCGTTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTAGCCCTCGACTAACCTaGTATGCCCCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: KSFSVMNSQVLQYKSRCSSPRLT*YAPSYW
Trigger: CCAGTATGATGGGGCATACAAGGTTAGTCGAGGGCT...ACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAACGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp AGTTACAAGATGATTTGTCTTCATGACACTGGCTTCTATGGTTTCCATGTCCATCCTGCTGAGGCACCATaGGGCCCTCTGAAGACTATA +
Preference number: 5 (lower is better)
Translates to: SYKMICLHDTGFYGFHVHPAEAP*GPLKTI
Trigger: TATAGTCTTCAGAGGGCCCAATGGTGCCTCAGCAGG...ATGGACATGGAAACCATAGAAGCCAGTGTCATGAAGACAAATCATCTTGTAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR CAA 90 bp AGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCCTGCTGAGGCACCATaGGGCCCTCTGAAGACTATA +
Preference number: 5 (lower is better)
Translates to: RSCSTNPGAVPASISNKFPAEAP*GPLKTI
Trigger: TATAGTCTTCAGAGGGCCCAATGGTGCCTCAGCAGG...AAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGCAAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
CDS-3UTR CAA 90 bp AGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCCTGTAAGCACCACCACTGGATaGTTATCCCGAATGGCTGAT +
Preference number: 5 (lower is better)
Translates to: RGGEWRVFHTQTHLNFPVSTTTG*LSRMAD
Trigger: ATCAGCCATTCGGGATAACAATCCAGTGGTGGTGCT...TACAGGGAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp AGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCCCTGTAAGTGGCCCACAGGTCTaGAATGGGAAACCACAGTTA +
Preference number: 5 (lower is better)
Translates to: RGGEWRVFHTQTHLNFPVSGPQV*NGKPQL
Trigger: TAACTGTGGTTTCCCATTCAAGACCTGTGGGCCACT...TACAGGGAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp GCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCAGTGGCCCACAGGTCTaGAATGGGAAACCACAGTTA +
Preference number: 5 (lower is better)
Translates to: ASRGGEWRVFHTQTHLNFSGPQV*NGKPQL
Trigger: TAACTGTGGTTTCCCATTCAAGACCTGTGGGCCACT...GAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCATGAATAGTCAGGTCTaGCAGTACAAATCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASMNSQV*QYKSRC
Trigger: GCACCTGGATTTGTACTGCAAGACCTGACTATTCAT...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS CCA 90 bp GATCAGGTTGAAACTGAAGATGCTACACCACTGTGCCGCCAGCTGTaGCTCTTGTTCATTCATAAAGTCTTCAATTCAACTTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: DQVETEDATPLCRQL*LLFIHKVFNSTSFQ
Trigger: CTGGAATGAAGTTGAATTGAAGACTTTATGAATGAACAAGAGCCACAGCTGGCGGCACAGTGGTGTAGCATCTTCAGTTTCAACCTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469364.5
ENST00000479945.1
CDS-3UTR CAA 90 bp ACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATCCTGCTGAGGCACCATaGGGCCCTCTGAAGACTATA +
Preference number: 5 (lower is better)
Translates to: TNPGAVPASISNKFQRLDPAEAP*GPLKTI
Trigger: TATAGTCTTCAGAGGGCCCAATGGTGCCTCAGCAGG...ATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
CDS-3UTR CAA 90 bp GAAGCATGGCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTGAATCAGAAAATCTTTaGACTGAGCTTCCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: EAWHLGEESGEFSIHKHIESENL*TELPEE
Trigger: TTCCTCCGGAAGCTCAGTCAAAAGATTTTCTGATTC...AATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGCCATGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp TTTTCCGTTATGAATAGTCAGGTCTTGCAGTACAAATCCAGGTGCAGTGCCAGCGAATCAGAAAATCTTTaGACTGAGCTTCCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: FSVMNSQVLQYKSRCSASESENL*TELPEE
Trigger: TTCCTCCGGAAGCTCAGTCAAAAGATTTTCTGATTC...GCTGGCACTGCACCTGGATTTGTACTGCAAGACCTGACTATTCATAACGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp GTCTTCATGACACTGGCTTCTATGGTTTCCATGTCCATTGGTCTAATGGTACGCAGATCAGAGATCAGGTaGAAACTGAAGATGCTACAC +
Preference number: 5 (lower is better)
Translates to: VFMTLASMVSMSIGLMVRRSEIR*KLKMLH
Trigger: GTGTAGCATCTTCAGTTTCAACCTGATCTCTGATCT...GCGTACCATTAGACCAATGGACATGGAAACCATAGAAGCCAGTGTCATGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR CAA 90 bp ACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATAGCCCTCGACTAACCTaGTATGCCCCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: TNPGAVPASISNKFQRLDSPRLT*YAPSYW
Trigger: CCAGTATGATGGGGCATACAAGGTTAGTCGAGGGCT...ATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATGGAGCATCCAGGAAATaGAACGCAGGACCTTCCATG +
Preference number: 5 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNGASRK*NAGPSM
Trigger: CATGGAAGGTCCTGCGTTCAATTTCCTGGATGCTCC...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000485460.5
CDS-3UTR CAA 90 bp ACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATGGAGCATCCAGGAAATaGAACGCAGGACCTTCCATG +
Preference number: 5 (lower is better)
Translates to: TNPGAVPASISNKFQRLDGASRK*NAGPSM
Trigger: CATGGAAGGTCCTGCGTTCAATTTCCTGGATGCTCC...ATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000485460.5
CDS-3UTR CAA 90 bp GCATCTAGGGGAGGAGAGTGGAGAGTTTTCCATACACAAACACATTTAAACTTCATGAATAGTCAGGTCTaGCAGTACAAATCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: ASRGGEWRVFHTQTHLNFMNSQV*QYKSRC
Trigger: GCACCTGGATTTGTACTGCAAGACCTGACTATTCAT...GAAGTTTAAATGTGTTTGTGTATGGAAAACTCTCCACTCTCCTCCCCTAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTAGCCCTCGACTAACCTaGTATGCCCCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: NPGAVPASISNKFQRLDISPRLT*YAPSYW
Trigger: CCAGTATGATGGGGCATACAAGGTTAGTCGAGGGCT...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp CTGCCACATCCATACTTTGTCCTTGTGGTGAGAGAGGATAAAATGTTATATAATAGCACCACCACTGGATaGTTATCCCGAATGGCTGAT +
Preference number: 5 (lower is better)
Translates to: LPHPYFVLVVREDKMLYNSTTTG*LSRMAD
Trigger: ATCAGCCATTCGGGATAACAATCCAGTGGTGGTGCT...ATTATATAACATTTTATCCTCTCTCACCACAAGGACAAAGTATGGATGTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp ATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTCAGCACCACCACTGGATaGTTATCCCGAATGGCTGAT +
Preference number: 5 (lower is better)
Translates to: IQVQCQQVFQINFNDLIFSTTTG*LSRMAD
Trigger: ATCAGCCATTCGGGATAACAATCCAGTGGTGGTGCT...GAATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp CAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATAAGTGGCCCACAGGTCTaGAATGGGAAACCACAGTTA +
Preference number: 5 (lower is better)
Translates to: QIQVQCQQVFQINFNDLISGPQV*NGKPQL
Trigger: TAACTGTGGTTTCCCATTCAAGACCTGTGGGCCACT...TATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS-3UTR CAA 90 bp GCAGTACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACAGGACAAGTTTAAAGTaGAAGTCGTTTGGCCACTCC +
Preference number: 5 (lower is better)
Translates to: AVQIQVQCQQVFQINFNDRTSLK*KSFGHS
Trigger: GGAGTGGCCAAACGACTTCAACTTTAAACTTGTCCT...GTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGTACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474765.1
CDS-3UTR CAA 90 bp TCCTTCCACAGTTACAAGATGATTTGTCTTCATGACACTGGCTTCTATGGTTTCGAATCAGAAAATCTTTaGACTGAGCTTCCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SFHSYKMICLHDTGFYGFESENL*TELPEE
Trigger: TTCCTCCGGAAGCTCAGTCAAAAGATTTTCTGATTC...GAAACCATAGAAGCCAGTGTCATGAAGACAAATCATCTTGTAACTGTGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469364.5
CDS-3UTR CAA 90 bp AATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATATTAGTGGCCCACAGGTCTaGAATGGGAAACCACAGTTA +
Preference number: 5 (lower is better)
Translates to: NPGAVPASISNKFQRLDISGPQV*NGKPQL
Trigger: TAACTGTGGTTTCCCATTCAAGACCTGTGGGCCACT...AATATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS TCA 90 bp AGGGAAATGAGGAGTTACCGAGTAATGGACAGTTTCTGCTTGGGATaGTTAAAAAGTTCTGGAAATGGATGGTGGTTAATGGTTGTACAA +
Preference number: 5 (lower is better)
Translates to: REMRSYRVMDSFCLG*LKSSGNGWWLMVVQ
Trigger: TTGTACAACCATTAACCACCATCCATTTCCAGAACTTTTTAATCATCCCAAGCAGAAACTGTCCATTACTCGGTAACTCCTCATTTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS-3UTR CAA 90 bp CAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATAATGAATAGTCAGGTCTaGCAGTACAAATCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: QIQVQCQQVFQINFNDLIMNSQV*QYKSRC
Trigger: GCACCTGGATTTGTACTGCAAGACCTGACTATTCAT...TATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS TCA 90 bp AACATTTCTATTACACATAGTTGGTCTTTGCATGTGTTAATGTACTaGGTGCTCACTAGGTGCCAAGTACTGCCAAATACTTTGCATCCA +
Preference number: 5 (lower is better)
Translates to: NISITHSWSLHVLMY*VLTRCQVLPNTLHP
Trigger: TGGATGCAAAGTATTTGGCAGTACTTGGCACCTAGTGAGCACTCAGTACATTAACACATGCAAAGACCAACTATGTGTAATAGAAATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS GCA 90 bp CATACCCTGATTTATAGCATCACGAACTGTCACCTGTCACAGGTATaGAAAAACAGTCAATACAGAATTGTTTGGGATTCAACTAAGATT +
Preference number: 5 (lower is better)
Translates to: HTLIYSITNCHLSQV*KNSQYRIVWDSTKI
Trigger: AATCTTAGTTGAATCCCAAACAATTCTGTATTGACTGTTTTTGCATACCTGTGACAGGTGACAGTTCGTGATGCTATAAATCAGGGTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS-3UTR CAA 90 bp ACAAATCCAGGTGCAGTGCCAGCAAGTATTTCAAATAAATTTCAACGACTTGATGCTTGCATGGAGAAATaGAAGGTCATAAATTCACAA +
Preference number: 5 (lower is better)
Translates to: TNPGAVPASISNKFQRLDACMEK*KVINSQ
Trigger: TTGTGAATTTATGACCTTCAATTTCTCCATGCAAGC...ATCAAGTCGTTGAAATTTATTTGAAATACTTGCTGGCACTGCACCTGGATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000469364.5
ENST00000474765.1
ENST00000485460.5
CDS GCA 72 bp GGCAGGGGTCGCGTGGGAATACAGGCCGCGCGCTGCTaGCTACCTCCCGAAGGGGTCTCCGCACCAAGCCAG +
Preference number: 6 (lower is better)
Translates to: GRGRVGIQAARC*LPPEGVSAPSQ
Trigger: CTGGCTTGGTGCGGAGACCCCTTCGGGAGGTAGGCAGCAGCGCGCGGCCTGTATTCCCACGCGACCCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461692.5
CDS GCA 72 bp GTGGGCAGGGGTCGCGTGGGAATACAGGCCGCGCGCTaGTGCCTACCTCCCGAAGGGGTCTCCGCACCAAGC +
Preference number: 6 (lower is better)
Translates to: VGRGRVGIQAAR*CLPPEGVSAPS
Trigger: GCTTGGTGCGGAGACCCCTTCGGGAGGTAGGCAGCAGCGCGCGGCCTGTATTCCCACGCGACCCCTGCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461692.5
CDS CCA 72 bp CGGCGACAGAGGCAGCAGGAGCTCCACGGAGGATGCTaGCTCCGCAAACCCAAGGCCCACGGCGCCGGAAGG +
Preference number: 6 (lower is better)
Translates to: RRQRQQELHGGC*LRKPKAHGAGR
Trigger: CCTTCCGGCGCCGTGGGCCTTGGGTTTGCGGAGCCAGCATCCTCCGTGGAGCTCCTGCTGCCTCTGTCGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS TCA 72 bp GCGCCTGTTACCTGCAGCGCAGCCGGCGCGGTCCAGTaGAAGCGCCTCTTCAGCAGCCCGGAGACCTCCCGA +
Preference number: 6 (lower is better)
Translates to: APVTCSAAGAVQ*KRLFSSPETSR
Trigger: TCGGGAGGTCTCCGGGCTGCTGAAGAGGCGCTTTCACTGGACCGCGCCGGCTGCGCTGCAGGTAACAGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS TCA 72 bp CGAACTGTCACCTGCAGCGCAGCCGGCGCGGTCCAGTaGAAGCGCCTCTTCAGCAGCCCGGAGACCTCCCGA +
Preference number: 6 (lower is better)
Translates to: RTVTCSAAGAVQ*KRLFSSPETSR
Trigger: TCGGGAGGTCTCCGGGCTGCTGAAGAGGCGCTTTCACTGGACCGCGCCGGCTGCGCTGCAGGTGACAGTTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302746.11
ENST00000469364.5
ENST00000469827.1
ENST00000480626.5
ENST00000482894.5
ENST00000485460.5
CDS TCA 72 bp CGAACTGTCACCTGCAGCGCAGCCGGCGCGGTCCAGTaGAAGCGCCTCTTCAGCAGCCCGGAGACCTGGCAG +
Preference number: 6 (lower is better)
Translates to: RTVTCSAAGAVQ*KRLFSSPETWQ
Trigger: CTGCCAGGTCTCCGGGCTGCTGAAGAGGCGCTTTCACTGGACCGCGCCGGCTGCGCTGCAGGTGACAGTTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461692.5
CDS GCA 72 bp GCCAGCTGTGAGGTGGTGACTCGCCGGTGTGCTAATTaGCAGGCGGCGACAGAGGCAGCAGGAGCTCCACGG +
Preference number: 6 (lower is better)
Translates to: ASCEVVTRRCAN*QAATEAAGAPR
Trigger: CCGTGGAGCTCCTGCTGCCTCTGTCGCCGCCTGGCAATTAGCACACCGGCGAGTCACCACCTCACAGCTGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS CAA 90 bp ACCTCCCGAAGGGGTCTCCGCACCAAGCCAGACACCGCCGCCATCTaGGTCGTGTCCTCTATCCGCTGCCAAACGACAACAGAGGGGCCG +
Preference number: 6 (lower is better)
Translates to: TSRRGLRTKPDTAAI*VVSSIRCQTTTEGP
Trigger: CGGCCCCTCTGTTGTCGTTTGGCAGCGGATAGAGGACACGACCAAGATGGCGGCGGTGTCTGGCTTGGTGCGGAGACCCCTTCGGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383714.8
CDS GCA 72 bp GGGCAGTGCCCATACCAGGCAGCAAAGCACTGTGAGTaGTGGGCAGCTACACCTGCTGAGGCACCATTGGGC +
Preference number: 6 (lower is better)
Translates to: GQCPYQAAKHCE*WAATPAEAPLG
Trigger: GCCCAATGGTGCCTCAGCAGGTGTAGCTGCCCAGCACTCACAGTGCTTTGCTGCCTGGTATGGGCACTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000461692.5
ENST00000469364.5
ENST00000474765.1
ENST00000479945.1
ENST00000480626.5
CDS CCA 72 bp CAGTGCCCATACCAGGCAGCAAAGCACTGTGAGTGCTaGGCAGCTACACCTGCTGAGGCACCATTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: QCPYQAAKHCEC*AATPAEAPLGP
Trigger: AGGGCCCAATGGTGCCTCAGCAGGTGTAGCTGCCCAGCACTCACAGTGCTTTGCTGCCTGGTATGGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000461692.5
ENST00000469364.5
ENST00000474765.1
ENST00000479945.1
ENST00000480626.5
CDS CAA 72 bp AGGGGTCTCCGCACCAAGCCAGACACCGCCGCCATCTaGGTCGTGTCCTCTATCCGCTGCCAAACGACAACA +
Preference number: 6 (lower is better)
Translates to: RGLRTKPDTAAI*VVSSIRCQTTT
Trigger: TGTTGTCGTTTGGCAGCGGATAGAGGACACGACCAAGATGGCGGCGGTGTCTGGCTTGGTGCGGAGACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383714.8
CDS GCA 72 bp GAATTCCAGGGACTGACCACCTTTAAGCCTGGGCAGTaGCCATACCAGGCAGCAAAGCACTGTGAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: EFQGLTTFKPGQ*PYQAAKHCECW
Trigger: CCAGCACTCACAGTGCTTTGCTGCCTGGTATGGGCACTGCCCAGGCTTAAAGGTGGTCAGTCCCTGGAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000461692.5
ENST00000469364.5
ENST00000474765.1
ENST00000479945.1
ENST00000480626.5
ENST00000485460.5
CDS GCA 72 bp GCAGGACCTAGGAGAAGGAAGGCTCAACTGAGAGAGTaGAAATGCCAGCTGGGCACTACCACCTTGGCACAG +
Preference number: 6 (lower is better)
Translates to: AGPRRRKAQLRE*KCQLGTTTLAQ
Trigger: CTGTGCCAAGGTGGTAGTGCCCAGCTGGCATTTGCACTCTCTCAGTTGAGCCTTCCTTCTCCTAGGTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS CAA 90 bp GGGACATCAGCACCAGTGACACGAACAGCAGGAGCATCCAGGAAATaGAACGCAGGACCTAGGAGAAGGAAGGCTCAACTGAGAGAGTGC +
Preference number: 6 (lower is better)
Translates to: GTSAPVTRTAGASRK*NAGPRRRKAQLREC
Trigger: GCACTCTCTCAGTTGAGCCTTCCTTCTCCTAGGTCCTGCGTTCAATTTCCTGGATGCTCCTGCTGTTCGTGTCACTGGTGCTGATGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS CAA 72 bp GCACCAGTGACACGAACAGCAGGAGCATCCAGGAAATaGAACGCAGGACCTAGGAGAAGGAAGGCTCAACTG +
Preference number: 6 (lower is better)
Translates to: APVTRTAGASRK*NAGPRRRKAQL
Trigger: CAGTTGAGCCTTCCTTCTCCTAGGTCCTGCGTTCAATTTCCTGGATGCTCCTGCTGTTCGTGTCACTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS TCA 72 bp CCTCCAGGGTCTGCTTCCCACTGGAAGGCTTACCTCTaGTATGGGAGTGTCAATAATCCTCTTGTCTCCATA +
Preference number: 6 (lower is better)
Translates to: PPGSASHWKAYL*YGSVNNPLVSI
Trigger: TATGGAGACAAGAGGATTATTGACACTCCCATATCAGAGGTAAGCCTTCCAGTGGGAAGCAGACCCTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469827.1
ENST00000479945.1
CDS TCA 72 bp CTGAAGGCCACCAGACATGTAGTAGGTCTTGGCAGCTaGGTTTATAACCTGGTCAATGGCTTGCATGGAGAA +
Preference number: 6 (lower is better)
Translates to: LKATRHVVGLGS*VYNLVNGLHGE
Trigger: TTCTCCATGCAAGCCATTGACCAGGTTATAAACTCAGCTGCCAAGACCTACTACATGTCTGGTGGCCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302746.11
ENST00000383714.8
ENST00000461692.5
ENST00000469364.5
ENST00000474765.1
ENST00000479945.1
ENST00000480626.5
CDS TCA 72 bp GGCAGCTACACCAGACATGTAGTAGGTCTTGGCAGCTaGGTTTATAACCTGGTCAATGGCTTGCATGGAGAA +
Preference number: 6 (lower is better)
Translates to: GSYTRHVVGLGS*VYNLVNGLHGE
Trigger: TTCTCCATGCAAGCCATTGACCAGGTTATAAACTCAGCTGCCAAGACCTACTACATGTCTGGTGTAGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485460.5
CDS GCA 72 bp AGAGATCAGGTTGAAACTGAAGATGCTACACCACTGTaGCGCCAGCTGTGGCTCTTGTTCATTCATAAAGTC +
Preference number: 6 (lower is better)
Translates to: RDQVETEDATPL*RQLWLLFIHKV
Trigger: GACTTTATGAATGAACAAGAGCCACAGCTGGCGGCACAGTGGTGTAGCATCTTCAGTTTCAACCTGATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469364.5
ENST00000479945.1
CDS TCA 72 bp TCAAACTCTGACGCATGCTACAACATGGATGAACCTTaGGGACATTACGCTGAGATAAGCCAGACACAAAAG +
Preference number: 6 (lower is better)
Translates to: SNSDACYNMDEP*GHYAEISQTQK
Trigger: CTTTTGTGTCTGGCTTATCTCAGCGTAATGTCCTCAAGGTTCATCCATGTTGTAGCATGCGTCAGAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS CAA 72 bp GAAGATGCTACACCACTGTGCCGCCAGCTGTGGCTCTaGTTCATTCATAAAGTCTTCAATTCAACTTCATTC +
Preference number: 6 (lower is better)
Translates to: EDATPLCRQLWL*FIHKVFNSTSF
Trigger: GAATGAAGTTGAATTGAAGACTTTATGAATGAACAAGAGCCACAGCTGGCGGCACAGTGGTGTAGCATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469364.5
ENST00000479945.1
CDS TCA 72 bp AGGAGTTACCGAGTAATGGACAGTTTCTGCTTGGGATaGTTAAAAAGTTCTGGAAATGGATGGTGGTTAATG +
Preference number: 6 (lower is better)
Translates to: RSYRVMDSFCLG*LKSSGNGWWLM
Trigger: CATTAACCACCATCCATTTCCAGAACTTTTTAATCATCCCAAGCAGAAACTGTCCATTACTCGGTAACTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS TCA 72 bp ATTACACATAGTTGGTCTTTGCATGTGTTAATGTACTaGGTGCTCACTAGGTGCCAAGTACTGCCAAATACT +
Preference number: 6 (lower is better)
Translates to: ITHSWSLHVLMY*VLTRCQVLPNT
Trigger: AGTATTTGGCAGTACTTGGCACCTAGTGAGCACTCAGTACATTAACACATGCAAAGACCAACTATGTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479945.1
CDS TCA 72 bp TGGAAATGGATGGTGGTTAATGGTTGTACAACATGGTaGATGTACTTAATGCCACTGAATTATACACTTCTA +
Preference number: 6 (lower is better)
Translates to: WKWMVVNGCTTW*MYLMPLNYTLL
Trigger: TAGAAGTGTATAATTCAGTGGCATTAAGTACATTCACCATGTTGTACAACCATTAACCACCATCCATTTCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479945.1